###################################
2277 groups of orthologs
2430 in-paralogs from C.neoformans
3453 in-paralogs from T.rubripes
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4877 bits
Score difference with first non-orthologous sequence - C.neoformans:4877 T.rubripes:3387

Q5KFR9              	100.00%		H2U434              	100.00%
Bootstrap support for Q5KFR9 as seed ortholog is 100%.
Bootstrap support for H2U434 as seed ortholog is 100%.

Group of orthologs #2. Best score 3689 bits
Score difference with first non-orthologous sequence - C.neoformans:3689 T.rubripes:3689

Q5KPW2              	100.00%		H2UUP5              	100.00%
Bootstrap support for Q5KPW2 as seed ortholog is 100%.
Bootstrap support for H2UUP5 as seed ortholog is 100%.

Group of orthologs #3. Best score 2176 bits
Score difference with first non-orthologous sequence - C.neoformans:1324 T.rubripes:835

Q5KET5              	100.00%		H2RSA0              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for H2RSA0 as seed ortholog is 100%.

Group of orthologs #4. Best score 2148 bits
Score difference with first non-orthologous sequence - C.neoformans:2148 T.rubripes:658

Q5KNM2              	100.00%		H2U243              	100.00%
Bootstrap support for Q5KNM2 as seed ortholog is 100%.
Bootstrap support for H2U243 as seed ortholog is 100%.

Group of orthologs #5. Best score 1971 bits
Score difference with first non-orthologous sequence - C.neoformans:1971 T.rubripes:1971

Q5KA29              	100.00%		H2T1P2              	100.00%
                    	       		H2RKP2              	88.65%
                    	       		H2U056              	72.95%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for H2T1P2 as seed ortholog is 100%.

Group of orthologs #6. Best score 1889 bits
Score difference with first non-orthologous sequence - C.neoformans:1889 T.rubripes:1889

P0CN26              	100.00%		H2UTB8              	100.00%
Bootstrap support for P0CN26 as seed ortholog is 100%.
Bootstrap support for H2UTB8 as seed ortholog is 100%.

Group of orthologs #7. Best score 1823 bits
Score difference with first non-orthologous sequence - C.neoformans:1823 T.rubripes:1823

Q5KFC9              	100.00%		H2TKQ9              	100.00%
                    	       		H2URL5              	58.61%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for H2TKQ9 as seed ortholog is 100%.

Group of orthologs #8. Best score 1695 bits
Score difference with first non-orthologous sequence - C.neoformans:1695 T.rubripes:1695

Q5KEY7              	100.00%		H2TDG4              	100.00%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for H2TDG4 as seed ortholog is 100%.

Group of orthologs #9. Best score 1559 bits
Score difference with first non-orthologous sequence - C.neoformans:1559 T.rubripes:1559

Q5KGG3              	100.00%		H2U2N2              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for H2U2N2 as seed ortholog is 100%.

Group of orthologs #10. Best score 1329 bits
Score difference with first non-orthologous sequence - C.neoformans:1329 T.rubripes:1329

Q5KC33              	100.00%		H2TAU8              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for H2TAU8 as seed ortholog is 100%.

Group of orthologs #11. Best score 1307 bits
Score difference with first non-orthologous sequence - C.neoformans:1307 T.rubripes:1307

Q5KFV9              	100.00%		H2UBT0              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for H2UBT0 as seed ortholog is 100%.

Group of orthologs #12. Best score 1282 bits
Score difference with first non-orthologous sequence - C.neoformans:1282 T.rubripes:1282

Q5KBW5              	100.00%		H2URZ8              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for H2URZ8 as seed ortholog is 100%.

Group of orthologs #13. Best score 1255 bits
Score difference with first non-orthologous sequence - C.neoformans:1255 T.rubripes:1255

Q5KEH7              	100.00%		H2TLX6              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for H2TLX6 as seed ortholog is 100%.

Group of orthologs #14. Best score 1248 bits
Score difference with first non-orthologous sequence - C.neoformans:1248 T.rubripes:1248

Q5KNL1              	100.00%		H2V1R9              	100.00%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for H2V1R9 as seed ortholog is 100%.

Group of orthologs #15. Best score 1196 bits
Score difference with first non-orthologous sequence - C.neoformans:780 T.rubripes:656

Q5KJ25              	100.00%		H2SB51              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for H2SB51 as seed ortholog is 100%.

Group of orthologs #16. Best score 1196 bits
Score difference with first non-orthologous sequence - C.neoformans:1196 T.rubripes:13

Q5KP97              	100.00%		H2UY95              	100.00%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for H2UY95 as seed ortholog is 56%.
Alternative seed ortholog is H2SY53 (13 bits away from this cluster)

Group of orthologs #17. Best score 1193 bits
Score difference with first non-orthologous sequence - C.neoformans:1193 T.rubripes:1193

Q5KAR2              	100.00%		H2TQH3              	100.00%
Bootstrap support for Q5KAR2 as seed ortholog is 100%.
Bootstrap support for H2TQH3 as seed ortholog is 100%.

Group of orthologs #18. Best score 1178 bits
Score difference with first non-orthologous sequence - C.neoformans:790 T.rubripes:694

Q5KGT3              	100.00%		H2V791              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for H2V791 as seed ortholog is 100%.

Group of orthologs #19. Best score 1168 bits
Score difference with first non-orthologous sequence - C.neoformans:1168 T.rubripes:1168

Q5K9W1              	100.00%		H2SW10              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for H2SW10 as seed ortholog is 100%.

Group of orthologs #20. Best score 1159 bits
Score difference with first non-orthologous sequence - C.neoformans:1159 T.rubripes:1101

Q5KE57              	100.00%		H2SLZ0              	100.00%
Bootstrap support for Q5KE57 as seed ortholog is 100%.
Bootstrap support for H2SLZ0 as seed ortholog is 100%.

Group of orthologs #21. Best score 1153 bits
Score difference with first non-orthologous sequence - C.neoformans:1153 T.rubripes:1153

Q5KKH8              	100.00%		H2RJJ5              	100.00%
                    	       		Q98TR3              	65.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for H2RJJ5 as seed ortholog is 100%.

Group of orthologs #22. Best score 1144 bits
Score difference with first non-orthologous sequence - C.neoformans:1144 T.rubripes:1026

Q5KIQ1              	100.00%		H2UYE7              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for H2UYE7 as seed ortholog is 100%.

Group of orthologs #23. Best score 1140 bits
Score difference with first non-orthologous sequence - C.neoformans:1140 T.rubripes:975

Q5KPM2              	100.00%		H2SY47              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for H2SY47 as seed ortholog is 100%.

Group of orthologs #24. Best score 1135 bits
Score difference with first non-orthologous sequence - C.neoformans:1135 T.rubripes:331

Q5KPX3              	100.00%		H2TNX7              	100.00%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for H2TNX7 as seed ortholog is 100%.

Group of orthologs #25. Best score 1119 bits
Score difference with first non-orthologous sequence - C.neoformans:1119 T.rubripes:1119

Q5KGK1              	100.00%		H2SJW2              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for H2SJW2 as seed ortholog is 100%.

Group of orthologs #26. Best score 1118 bits
Score difference with first non-orthologous sequence - C.neoformans:1118 T.rubripes:1118

Q5KM99              	100.00%		H2UVU4              	100.00%
Bootstrap support for Q5KM99 as seed ortholog is 100%.
Bootstrap support for H2UVU4 as seed ortholog is 100%.

Group of orthologs #27. Best score 1116 bits
Score difference with first non-orthologous sequence - C.neoformans:1116 T.rubripes:990

Q5KHJ9              	100.00%		H2V9Q6              	100.00%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for H2V9Q6 as seed ortholog is 100%.

Group of orthologs #28. Best score 1081 bits
Score difference with first non-orthologous sequence - C.neoformans:1081 T.rubripes:1081

Q5KIB7              	100.00%		H2TAF9              	100.00%
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for H2TAF9 as seed ortholog is 100%.

Group of orthologs #29. Best score 1078 bits
Score difference with first non-orthologous sequence - C.neoformans:1078 T.rubripes:1078

Q5KEG6              	100.00%		H2U4F9              	100.00%
Bootstrap support for Q5KEG6 as seed ortholog is 100%.
Bootstrap support for H2U4F9 as seed ortholog is 100%.

Group of orthologs #30. Best score 1076 bits
Score difference with first non-orthologous sequence - C.neoformans:411 T.rubripes:1076

Q5KH79              	100.00%		H2SW08              	100.00%
Bootstrap support for Q5KH79 as seed ortholog is 100%.
Bootstrap support for H2SW08 as seed ortholog is 100%.

Group of orthologs #31. Best score 1055 bits
Score difference with first non-orthologous sequence - C.neoformans:1055 T.rubripes:1055

Q5KHW3              	100.00%		H2UJX3              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for H2UJX3 as seed ortholog is 100%.

Group of orthologs #32. Best score 1054 bits
Score difference with first non-orthologous sequence - C.neoformans:1054 T.rubripes:1054

Q5KG64              	100.00%		H2SKE8              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for H2SKE8 as seed ortholog is 100%.

Group of orthologs #33. Best score 1052 bits
Score difference with first non-orthologous sequence - C.neoformans:659 T.rubripes:642

Q5KD67              	100.00%		H2SV77              	100.00%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for H2SV77 as seed ortholog is 100%.

Group of orthologs #34. Best score 1052 bits
Score difference with first non-orthologous sequence - C.neoformans:1052 T.rubripes:1052

Q5K754              	100.00%		H2V3D5              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for H2V3D5 as seed ortholog is 100%.

Group of orthologs #35. Best score 1041 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubripes:855

Q5KIK6              	100.00%		H2V309              	100.00%
Bootstrap support for Q5KIK6 as seed ortholog is 99%.
Bootstrap support for H2V309 as seed ortholog is 100%.

Group of orthologs #36. Best score 1035 bits
Score difference with first non-orthologous sequence - C.neoformans:1035 T.rubripes:1035

Q5KIF6              	100.00%		H2RY49              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for H2RY49 as seed ortholog is 100%.

Group of orthologs #37. Best score 1024 bits
Score difference with first non-orthologous sequence - C.neoformans:831 T.rubripes:1024

Q5KCR8              	100.00%		H2UGJ0              	100.00%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for H2UGJ0 as seed ortholog is 100%.

Group of orthologs #38. Best score 1010 bits
Score difference with first non-orthologous sequence - C.neoformans:618 T.rubripes:461

Q5KKN7              	100.00%		H2SH84              	100.00%
Bootstrap support for Q5KKN7 as seed ortholog is 100%.
Bootstrap support for H2SH84 as seed ortholog is 100%.

Group of orthologs #39. Best score 1003 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubripes:228

Q5KJN9              	100.00%		H2RZI1              	100.00%
                    	       		H2U152              	31.60%
                    	       		H2TWK5              	23.79%
                    	       		H2TFL8              	22.65%
Bootstrap support for Q5KJN9 as seed ortholog is 97%.
Bootstrap support for H2RZI1 as seed ortholog is 99%.

Group of orthologs #40. Best score 993 bits
Score difference with first non-orthologous sequence - C.neoformans:644 T.rubripes:623

Q5KCV6              	100.00%		H2USJ9              	100.00%
                    	       		H2RWV4              	53.76%
                    	       		H2T926              	52.83%
                    	       		H2SSC9              	50.79%
Bootstrap support for Q5KCV6 as seed ortholog is 100%.
Bootstrap support for H2USJ9 as seed ortholog is 100%.

Group of orthologs #41. Best score 991 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubripes:243

Q5KP96              	100.00%		H2RUN5              	100.00%
                    	       		H2UEP4              	45.63%
Bootstrap support for Q5KP96 as seed ortholog is 99%.
Bootstrap support for H2RUN5 as seed ortholog is 99%.

Group of orthologs #42. Best score 990 bits
Score difference with first non-orthologous sequence - C.neoformans:990 T.rubripes:990

P0CR22              	100.00%		H2USL8              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for H2USL8 as seed ortholog is 100%.

Group of orthologs #43. Best score 979 bits
Score difference with first non-orthologous sequence - C.neoformans:979 T.rubripes:979

Q5KEV8              	100.00%		H2SUR9              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for H2SUR9 as seed ortholog is 100%.

Group of orthologs #44. Best score 975 bits
Score difference with first non-orthologous sequence - C.neoformans:975 T.rubripes:975

Q5KL19              	100.00%		H2V1U0              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for H2V1U0 as seed ortholog is 100%.

Group of orthologs #45. Best score 962 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubripes:227

Q5KKM4              	100.00%		H2UP56              	100.00%
Q5KKP4              	80.00%		H2SJP2              	63.58%
Bootstrap support for Q5KKM4 as seed ortholog is 100%.
Bootstrap support for H2UP56 as seed ortholog is 100%.

Group of orthologs #46. Best score 940 bits
Score difference with first non-orthologous sequence - C.neoformans:940 T.rubripes:228

Q5KMF6              	100.00%		P49696              	100.00%
                    	       		H2U2K8              	61.83%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for P49696 as seed ortholog is 99%.

Group of orthologs #47. Best score 940 bits
Score difference with first non-orthologous sequence - C.neoformans:940 T.rubripes:940

Q5KA48              	100.00%		H2U5M9              	100.00%
Bootstrap support for Q5KA48 as seed ortholog is 100%.
Bootstrap support for H2U5M9 as seed ortholog is 100%.

Group of orthologs #48. Best score 939 bits
Score difference with first non-orthologous sequence - C.neoformans:939 T.rubripes:362

Q5KMH0              	100.00%		H2U2D7              	100.00%
                    	       		H2VEG7              	60.08%
                    	       		H2TL96              	47.90%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for H2U2D7 as seed ortholog is 100%.

Group of orthologs #49. Best score 938 bits
Score difference with first non-orthologous sequence - C.neoformans:938 T.rubripes:938

Q5K9G4              	100.00%		H2RSQ4              	100.00%
                    	       		H2SGX6              	71.33%
                    	       		H2USK8              	53.44%
Bootstrap support for Q5K9G4 as seed ortholog is 100%.
Bootstrap support for H2RSQ4 as seed ortholog is 100%.

Group of orthologs #50. Best score 928 bits
Score difference with first non-orthologous sequence - C.neoformans:928 T.rubripes:478

Q5KJI1              	100.00%		H2UPF1              	100.00%
                    	       		H2SH43              	45.87%
                    	       		H2TRH0              	45.52%
                    	       		H2RMM3              	42.25%
                    	       		H2TKH5              	38.53%
                    	       		H2T3Y5              	10.64%
                    	       		H2TTH9              	10.54%
                    	       		H2UN88              	10.30%
                    	       		H2SHZ7              	10.19%
                    	       		H2SKR3              	9.78%
                    	       		H2ULB2              	9.71%
                    	       		H2S271              	9.64%
                    	       		H2S2N2              	8.37%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for H2UPF1 as seed ortholog is 100%.

Group of orthologs #51. Best score 925 bits
Score difference with first non-orthologous sequence - C.neoformans:925 T.rubripes:925

P0CR38              	100.00%		H2SRP3              	100.00%
                    	       		H2UC88              	59.72%
Bootstrap support for P0CR38 as seed ortholog is 100%.
Bootstrap support for H2SRP3 as seed ortholog is 100%.

Group of orthologs #52. Best score 921 bits
Score difference with first non-orthologous sequence - C.neoformans:507 T.rubripes:275

Q5K7R6              	100.00%		H2VA29              	100.00%
                    	       		H2U3M5              	62.33%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for H2VA29 as seed ortholog is 100%.

Group of orthologs #53. Best score 918 bits
Score difference with first non-orthologous sequence - C.neoformans:918 T.rubripes:918

Q5K7U0              	100.00%		H2SKD0              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for H2SKD0 as seed ortholog is 100%.

Group of orthologs #54. Best score 914 bits
Score difference with first non-orthologous sequence - C.neoformans:914 T.rubripes:914

Q5KIL9              	100.00%		H2THF1              	100.00%
                    	       		H2SHX8              	56.82%
Bootstrap support for Q5KIL9 as seed ortholog is 100%.
Bootstrap support for H2THF1 as seed ortholog is 100%.

Group of orthologs #55. Best score 898 bits
Score difference with first non-orthologous sequence - C.neoformans:898 T.rubripes:898

Q5KLE4              	100.00%		H2RLF2              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for H2RLF2 as seed ortholog is 100%.

Group of orthologs #56. Best score 895 bits
Score difference with first non-orthologous sequence - C.neoformans:895 T.rubripes:789

Q5K8Q4              	100.00%		H2UKB2              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for H2UKB2 as seed ortholog is 100%.

Group of orthologs #57. Best score 890 bits
Score difference with first non-orthologous sequence - C.neoformans:890 T.rubripes:488

Q5KA71              	100.00%		H2V8H7              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for H2V8H7 as seed ortholog is 100%.

Group of orthologs #58. Best score 887 bits
Score difference with first non-orthologous sequence - C.neoformans:887 T.rubripes:669

Q5KNR6              	100.00%		H2T012              	100.00%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for H2T012 as seed ortholog is 100%.

Group of orthologs #59. Best score 886 bits
Score difference with first non-orthologous sequence - C.neoformans:779 T.rubripes:886

Q5KBA0              	100.00%		H2V735              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for H2V735 as seed ortholog is 100%.

Group of orthologs #60. Best score 884 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:650

Q5KN49              	100.00%		H2SNQ5              	100.00%
                    	       		H2TR67              	23.41%
                    	       		H2VA03              	21.77%
Bootstrap support for Q5KN49 as seed ortholog is 100%.
Bootstrap support for H2SNQ5 as seed ortholog is 100%.

Group of orthologs #61. Best score 882 bits
Score difference with first non-orthologous sequence - C.neoformans:882 T.rubripes:882

Q5KDU2              	100.00%		H2V5M9              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for H2V5M9 as seed ortholog is 100%.

Group of orthologs #62. Best score 871 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:281

Q5K6Z6              	100.00%		H2S609              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 100%.
Bootstrap support for H2S609 as seed ortholog is 100%.

Group of orthologs #63. Best score 866 bits
Score difference with first non-orthologous sequence - C.neoformans:866 T.rubripes:609

Q5KDY4              	100.00%		H2T086              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for H2T086 as seed ortholog is 100%.

Group of orthologs #64. Best score 859 bits
Score difference with first non-orthologous sequence - C.neoformans:859 T.rubripes:859

Q5KH77              	100.00%		H2SX53              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for H2SX53 as seed ortholog is 100%.

Group of orthologs #65. Best score 856 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubripes:342

Q5KEX1              	100.00%		H2UFQ6              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 100%.
Bootstrap support for H2UFQ6 as seed ortholog is 100%.

Group of orthologs #66. Best score 846 bits
Score difference with first non-orthologous sequence - C.neoformans:846 T.rubripes:177

Q5KF97              	100.00%		H2RPT7              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for H2RPT7 as seed ortholog is 99%.

Group of orthologs #67. Best score 840 bits
Score difference with first non-orthologous sequence - C.neoformans:840 T.rubripes:840

Q5K9S3              	100.00%		H2S4G6              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for H2S4G6 as seed ortholog is 100%.

Group of orthologs #68. Best score 839 bits
Score difference with first non-orthologous sequence - C.neoformans:760 T.rubripes:839

Q5KN88              	100.00%		H2V6N6              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for H2V6N6 as seed ortholog is 100%.

Group of orthologs #69. Best score 827 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubripes:431

Q5K8W5              	100.00%		H2T4V1              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 100%.
Bootstrap support for H2T4V1 as seed ortholog is 100%.

Group of orthologs #70. Best score 824 bits
Score difference with first non-orthologous sequence - C.neoformans:824 T.rubripes:824

Q5KGV5              	100.00%		H2RQI3              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for H2RQI3 as seed ortholog is 100%.

Group of orthologs #71. Best score 820 bits
Score difference with first non-orthologous sequence - C.neoformans:820 T.rubripes:820

Q5KKQ6              	100.00%		H2T5Q5              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for H2T5Q5 as seed ortholog is 100%.

Group of orthologs #72. Best score 814 bits
Score difference with first non-orthologous sequence - C.neoformans:814 T.rubripes:814

Q5KLX6              	100.00%		H2S107              	100.00%
Bootstrap support for Q5KLX6 as seed ortholog is 100%.
Bootstrap support for H2S107 as seed ortholog is 100%.

Group of orthologs #73. Best score 813 bits
Score difference with first non-orthologous sequence - C.neoformans:813 T.rubripes:813

Q5KIH7              	100.00%		H2SXA8              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for H2SXA8 as seed ortholog is 100%.

Group of orthologs #74. Best score 811 bits
Score difference with first non-orthologous sequence - C.neoformans:811 T.rubripes:811

P0CN82              	100.00%		H2UKD8              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for H2UKD8 as seed ortholog is 100%.

Group of orthologs #75. Best score 808 bits
Score difference with first non-orthologous sequence - C.neoformans:808 T.rubripes:808

Q5KBP7              	100.00%		H2U8Z1              	100.00%
                    	       		H2SG43              	7.47%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for H2U8Z1 as seed ortholog is 100%.

Group of orthologs #76. Best score 808 bits
Score difference with first non-orthologous sequence - C.neoformans:808 T.rubripes:808

Q5KBF6              	100.00%		H2RQ70              	100.00%
Bootstrap support for Q5KBF6 as seed ortholog is 100%.
Bootstrap support for H2RQ70 as seed ortholog is 100%.

Group of orthologs #77. Best score 799 bits
Score difference with first non-orthologous sequence - C.neoformans:799 T.rubripes:439

P0CN32              	100.00%		H2TEZ8              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for H2TEZ8 as seed ortholog is 100%.

Group of orthologs #78. Best score 796 bits
Score difference with first non-orthologous sequence - C.neoformans:796 T.rubripes:796

Q5KAX5              	100.00%		H2TSP4              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for H2TSP4 as seed ortholog is 100%.

Group of orthologs #79. Best score 795 bits
Score difference with first non-orthologous sequence - C.neoformans:795 T.rubripes:617

Q5KQ62              	100.00%		H2S2P3              	100.00%
Bootstrap support for Q5KQ62 as seed ortholog is 100%.
Bootstrap support for H2S2P3 as seed ortholog is 100%.

Group of orthologs #80. Best score 794 bits
Score difference with first non-orthologous sequence - C.neoformans:591 T.rubripes:244

Q5KBX3              	100.00%		H2TC18              	100.00%
                    	       		H2TMH5              	34.54%
Bootstrap support for Q5KBX3 as seed ortholog is 100%.
Bootstrap support for H2TC18 as seed ortholog is 99%.

Group of orthologs #81. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:792 T.rubripes:792

Q5KQ25              	100.00%		H2S339              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for H2S339 as seed ortholog is 100%.

Group of orthologs #82. Best score 788 bits
Score difference with first non-orthologous sequence - C.neoformans:582 T.rubripes:491

P0CO16              	100.00%		H2U7Y4              	100.00%
Bootstrap support for P0CO16 as seed ortholog is 100%.
Bootstrap support for H2U7Y4 as seed ortholog is 100%.

Group of orthologs #83. Best score 787 bits
Score difference with first non-orthologous sequence - C.neoformans:787 T.rubripes:787

Q5KH73              	100.00%		H2U5C9              	100.00%
                    	       		H2VDP1              	74.59%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for H2U5C9 as seed ortholog is 100%.

Group of orthologs #84. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:786 T.rubripes:267

Q5KMU3              	100.00%		H2RZC5              	100.00%
                    	       		H2S6G0              	40.03%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for H2RZC5 as seed ortholog is 99%.

Group of orthologs #85. Best score 785 bits
Score difference with first non-orthologous sequence - C.neoformans:785 T.rubripes:731

Q5KDD4              	100.00%		H2U9W9              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for H2U9W9 as seed ortholog is 100%.

Group of orthologs #86. Best score 782 bits
Score difference with first non-orthologous sequence - C.neoformans:782 T.rubripes:782

Q5KMN3              	100.00%		H2T3S8              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for H2T3S8 as seed ortholog is 100%.

Group of orthologs #87. Best score 775 bits
Score difference with first non-orthologous sequence - C.neoformans:775 T.rubripes:775

Q5KGH2              	100.00%		H2SH03              	100.00%
Bootstrap support for Q5KGH2 as seed ortholog is 100%.
Bootstrap support for H2SH03 as seed ortholog is 100%.

Group of orthologs #88. Best score 768 bits
Score difference with first non-orthologous sequence - C.neoformans:768 T.rubripes:699

Q5KDF5              	100.00%		H2RYP3              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for H2RYP3 as seed ortholog is 100%.

Group of orthologs #89. Best score 762 bits
Score difference with first non-orthologous sequence - C.neoformans:410 T.rubripes:138

Q5KM62              	100.00%		H2TG15              	100.00%
                    	       		H2U305              	88.69%
                    	       		H2T4G8              	79.76%
                    	       		H2UG85              	79.17%
                    	       		H2UH06              	75.60%
                    	       		H2RKZ6              	75.00%
                    	       		H2RNF4              	64.88%
                    	       		H2RWG1              	57.14%
                    	       		H2S7A1              	23.21%
                    	       		H2SWL9              	10.12%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for H2TG15 as seed ortholog is 100%.

Group of orthologs #90. Best score 761 bits
Score difference with first non-orthologous sequence - C.neoformans:761 T.rubripes:761

Q5KII0              	100.00%		H2S5J5              	100.00%
                    	       		H2RK26              	39.09%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for H2S5J5 as seed ortholog is 100%.

Group of orthologs #91. Best score 761 bits
Score difference with first non-orthologous sequence - C.neoformans:761 T.rubripes:761

Q5KEV3              	100.00%		H2T554              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for H2T554 as seed ortholog is 100%.

Group of orthologs #92. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:759 T.rubripes:759

Q5KML2              	100.00%		H2V5Y6              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for H2V5Y6 as seed ortholog is 100%.

Group of orthologs #93. Best score 757 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:442

Q5KKE7              	100.00%		H2RIN9              	100.00%
                    	       		H2U1C0              	88.89%
                    	       		H2SKZ5              	66.67%
                    	       		H2SJZ5              	50.33%
                    	       		H2U9V3              	10.46%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for H2RIN9 as seed ortholog is 100%.

Group of orthologs #94. Best score 755 bits
Score difference with first non-orthologous sequence - C.neoformans:755 T.rubripes:349

Q5KJ33              	100.00%		H2TKK9              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for H2TKK9 as seed ortholog is 100%.

Group of orthologs #95. Best score 754 bits
Score difference with first non-orthologous sequence - C.neoformans:754 T.rubripes:126

P0CN30              	100.00%		H2SNC1              	100.00%
                    	       		H2SKS4              	50.89%
                    	       		H2SIC4              	44.97%
                    	       		H2U6U7              	33.14%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for H2SNC1 as seed ortholog is 99%.

Group of orthologs #96. Best score 751 bits
Score difference with first non-orthologous sequence - C.neoformans:751 T.rubripes:751

Q5KQ47              	100.00%		H2TF93              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for H2TF93 as seed ortholog is 100%.

Group of orthologs #97. Best score 750 bits
Score difference with first non-orthologous sequence - C.neoformans:750 T.rubripes:349

Q5KHP4              	100.00%		H2T5Y1              	100.00%
                    	       		H2S987              	47.04%
                    	       		H2SR89              	35.92%
Bootstrap support for Q5KHP4 as seed ortholog is 100%.
Bootstrap support for H2T5Y1 as seed ortholog is 100%.

Group of orthologs #98. Best score 748 bits
Score difference with first non-orthologous sequence - C.neoformans:748 T.rubripes:551

Q5KEF7              	100.00%		H2RUX1              	100.00%
                    	       		H2TZZ0              	61.80%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for H2RUX1 as seed ortholog is 100%.

Group of orthologs #99. Best score 748 bits
Score difference with first non-orthologous sequence - C.neoformans:553 T.rubripes:568

Q5KN74              	100.00%		H2SA11              	100.00%
Bootstrap support for Q5KN74 as seed ortholog is 100%.
Bootstrap support for H2SA11 as seed ortholog is 100%.

Group of orthologs #100. Best score 747 bits
Score difference with first non-orthologous sequence - C.neoformans:747 T.rubripes:189

P0CP00              	100.00%		H2T288              	100.00%
                    	       		H2V897              	57.34%
                    	       		H2STA4              	50.57%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for H2T288 as seed ortholog is 99%.

Group of orthologs #101. Best score 746 bits
Score difference with first non-orthologous sequence - C.neoformans:746 T.rubripes:746

Q5KFB9              	100.00%		H2UTA0              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for H2UTA0 as seed ortholog is 100%.

Group of orthologs #102. Best score 741 bits
Score difference with first non-orthologous sequence - C.neoformans:741 T.rubripes:741

Q5KAT3              	100.00%		H2T1A3              	100.00%
                    	       		H2TQ05              	43.92%
Bootstrap support for Q5KAT3 as seed ortholog is 100%.
Bootstrap support for H2T1A3 as seed ortholog is 100%.

Group of orthologs #103. Best score 740 bits
Score difference with first non-orthologous sequence - C.neoformans:420 T.rubripes:345

Q5K8Q3              	100.00%		H2TYR3              	100.00%
Bootstrap support for Q5K8Q3 as seed ortholog is 100%.
Bootstrap support for H2TYR3 as seed ortholog is 100%.

Group of orthologs #104. Best score 734 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:468

Q5K906              	100.00%		H2U7W6              	100.00%
Q5KDA3              	99.59%		H2SY89              	72.58%
Bootstrap support for Q5K906 as seed ortholog is 91%.
Bootstrap support for H2U7W6 as seed ortholog is 100%.

Group of orthologs #105. Best score 733 bits
Score difference with first non-orthologous sequence - C.neoformans:733 T.rubripes:733

Q5K7B4              	100.00%		H2U9R9              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for H2U9R9 as seed ortholog is 100%.

Group of orthologs #106. Best score 733 bits
Score difference with first non-orthologous sequence - C.neoformans:733 T.rubripes:733

Q5KBV2              	100.00%		H2UK56              	100.00%
Bootstrap support for Q5KBV2 as seed ortholog is 100%.
Bootstrap support for H2UK56 as seed ortholog is 100%.

Group of orthologs #107. Best score 731 bits
Score difference with first non-orthologous sequence - C.neoformans:731 T.rubripes:731

Q5KF07              	100.00%		H2UAU5              	100.00%
                    	       		H2SV21              	66.43%
                    	       		H2T3Z8              	52.07%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for H2UAU5 as seed ortholog is 100%.

Group of orthologs #108. Best score 729 bits
Score difference with first non-orthologous sequence - C.neoformans:729 T.rubripes:729

Q5KFU0              	100.00%		H2TVZ0              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for H2TVZ0 as seed ortholog is 100%.

Group of orthologs #109. Best score 727 bits
Score difference with first non-orthologous sequence - C.neoformans:727 T.rubripes:727

Q5KPI3              	100.00%		H2S510              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for H2S510 as seed ortholog is 100%.

Group of orthologs #110. Best score 726 bits
Score difference with first non-orthologous sequence - C.neoformans:726 T.rubripes:726

Q5KNM9              	100.00%		H2V485              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for H2V485 as seed ortholog is 100%.

Group of orthologs #111. Best score 725 bits
Score difference with first non-orthologous sequence - C.neoformans:665 T.rubripes:725

Q5KI75              	100.00%		H2UTW1              	100.00%
                    	       		Q9I8E6              	99.60%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for H2UTW1 as seed ortholog is 100%.

Group of orthologs #112. Best score 724 bits
Score difference with first non-orthologous sequence - C.neoformans:724 T.rubripes:724

Q5K7P1              	100.00%		H2V5T2              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for H2V5T2 as seed ortholog is 100%.

Group of orthologs #113. Best score 719 bits
Score difference with first non-orthologous sequence - C.neoformans:296 T.rubripes:194

Q5KMH9              	100.00%		H2RQG2              	100.00%
Bootstrap support for Q5KMH9 as seed ortholog is 100%.
Bootstrap support for H2RQG2 as seed ortholog is 99%.

Group of orthologs #114. Best score 717 bits
Score difference with first non-orthologous sequence - C.neoformans:562 T.rubripes:596

Q5KIF1              	100.00%		H2V5P5              	100.00%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for H2V5P5 as seed ortholog is 100%.

Group of orthologs #115. Best score 716 bits
Score difference with first non-orthologous sequence - C.neoformans:716 T.rubripes:716

Q5KGM7              	100.00%		H2UEP9              	100.00%
Bootstrap support for Q5KGM7 as seed ortholog is 100%.
Bootstrap support for H2UEP9 as seed ortholog is 100%.

Group of orthologs #116. Best score 712 bits
Score difference with first non-orthologous sequence - C.neoformans:524 T.rubripes:327

P0CO18              	100.00%		H2TXI7              	100.00%
Bootstrap support for P0CO18 as seed ortholog is 100%.
Bootstrap support for H2TXI7 as seed ortholog is 100%.

Group of orthologs #117. Best score 711 bits
Score difference with first non-orthologous sequence - C.neoformans:711 T.rubripes:647

P0CO10              	100.00%		H2UR36              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for H2UR36 as seed ortholog is 100%.

Group of orthologs #118. Best score 709 bits
Score difference with first non-orthologous sequence - C.neoformans:709 T.rubripes:709

Q5KB97              	100.00%		H2VD87              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for H2VD87 as seed ortholog is 100%.

Group of orthologs #119. Best score 707 bits
Score difference with first non-orthologous sequence - C.neoformans:707 T.rubripes:100

Q5KP06              	100.00%		P68142              	100.00%
                    	       		P53485              	90.57%
                    	       		P53486              	83.02%
                    	       		I6L6Z6              	81.13%
                    	       		H2SBD6              	60.38%
                    	       		P53482              	32.08%
                    	       		H2UI49              	28.30%
                    	       		P53480              	28.30%
                    	       		P68140              	24.53%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for P68142 as seed ortholog is 99%.

Group of orthologs #120. Best score 703 bits
Score difference with first non-orthologous sequence - C.neoformans:703 T.rubripes:703

Q5KKE9              	100.00%		H2RR14              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for H2RR14 as seed ortholog is 100%.

Group of orthologs #121. Best score 702 bits
Score difference with first non-orthologous sequence - C.neoformans:702 T.rubripes:646

Q5KP40              	100.00%		H2RTX3              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for H2RTX3 as seed ortholog is 100%.

Group of orthologs #122. Best score 702 bits
Score difference with first non-orthologous sequence - C.neoformans:702 T.rubripes:702

P0CL88              	100.00%		H2URN9              	100.00%
Bootstrap support for P0CL88 as seed ortholog is 100%.
Bootstrap support for H2URN9 as seed ortholog is 100%.

Group of orthologs #123. Best score 701 bits
Score difference with first non-orthologous sequence - C.neoformans:701 T.rubripes:701

Q5KL42              	100.00%		H2SQ27              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for H2SQ27 as seed ortholog is 100%.

Group of orthologs #124. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 T.rubripes:700

Q5KID7              	100.00%		H2UT67              	100.00%
Bootstrap support for Q5KID7 as seed ortholog is 100%.
Bootstrap support for H2UT67 as seed ortholog is 100%.

Group of orthologs #125. Best score 696 bits
Score difference with first non-orthologous sequence - C.neoformans:696 T.rubripes:696

Q5KNE3              	100.00%		H2V3V7              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for H2V3V7 as seed ortholog is 100%.

Group of orthologs #126. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:688 T.rubripes:688

P0CO08              	100.00%		H2RZH9              	100.00%
Bootstrap support for P0CO08 as seed ortholog is 100%.
Bootstrap support for H2RZH9 as seed ortholog is 100%.

Group of orthologs #127. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:688 T.rubripes:411

Q5KLP9              	100.00%		H2TMB3              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for H2TMB3 as seed ortholog is 100%.

Group of orthologs #128. Best score 687 bits
Score difference with first non-orthologous sequence - C.neoformans:613 T.rubripes:458

Q5KPQ9              	100.00%		H2V7V7              	100.00%
                    	       		H2SBQ4              	27.05%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for H2V7V7 as seed ortholog is 100%.

Group of orthologs #129. Best score 687 bits
Score difference with first non-orthologous sequence - C.neoformans:687 T.rubripes:687

Q5KMW1              	100.00%		H2RL94              	100.00%
Bootstrap support for Q5KMW1 as seed ortholog is 100%.
Bootstrap support for H2RL94 as seed ortholog is 100%.

Group of orthologs #130. Best score 679 bits
Score difference with first non-orthologous sequence - C.neoformans:679 T.rubripes:223

Q5K8H1              	100.00%		H2TVA3              	100.00%
Bootstrap support for Q5K8H1 as seed ortholog is 100%.
Bootstrap support for H2TVA3 as seed ortholog is 99%.

Group of orthologs #131. Best score 678 bits
Score difference with first non-orthologous sequence - C.neoformans:678 T.rubripes:333

Q5KFT2              	100.00%		H2V6U3              	100.00%
Bootstrap support for Q5KFT2 as seed ortholog is 100%.
Bootstrap support for H2V6U3 as seed ortholog is 100%.

Group of orthologs #132. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:676 T.rubripes:676

Q5KM80              	100.00%		H2UGU6              	100.00%
                    	       		H2TNH5              	27.33%
Bootstrap support for Q5KM80 as seed ortholog is 100%.
Bootstrap support for H2UGU6 as seed ortholog is 100%.

Group of orthologs #133. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:676 T.rubripes:676

Q5KLA1              	100.00%		H2TJ57              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for H2TJ57 as seed ortholog is 100%.

Group of orthologs #134. Best score 674 bits
Score difference with first non-orthologous sequence - C.neoformans:674 T.rubripes:246

Q5KJ87              	100.00%		H2S0Z2              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for H2S0Z2 as seed ortholog is 100%.

Group of orthologs #135. Best score 673 bits
Score difference with first non-orthologous sequence - C.neoformans:673 T.rubripes:673

Q5KMJ4              	100.00%		H2UQ25              	100.00%
                    	       		H2S0F2              	45.94%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for H2UQ25 as seed ortholog is 100%.

Group of orthologs #136. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 T.rubripes:524

Q5KGN2              	100.00%		H2S9Y9              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 100%.
Bootstrap support for H2S9Y9 as seed ortholog is 100%.

Group of orthologs #137. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:671 T.rubripes:671

Q5KBL4              	100.00%		H2U4E4              	100.00%
Bootstrap support for Q5KBL4 as seed ortholog is 100%.
Bootstrap support for H2U4E4 as seed ortholog is 100%.

Group of orthologs #138. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubripes:279

Q5KKP2              	100.00%		H2UYQ2              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 100%.
Bootstrap support for H2UYQ2 as seed ortholog is 100%.

Group of orthologs #139. Best score 670 bits
Score difference with first non-orthologous sequence - C.neoformans:670 T.rubripes:158

Q5KNG1              	100.00%		H2SJ66              	100.00%
                    	       		H2TUA8              	24.45%
Bootstrap support for Q5KNG1 as seed ortholog is 100%.
Bootstrap support for H2SJ66 as seed ortholog is 99%.

Group of orthologs #140. Best score 666 bits
Score difference with first non-orthologous sequence - C.neoformans:666 T.rubripes:666

Q5KJT2              	100.00%		H2UJJ3              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for H2UJJ3 as seed ortholog is 100%.

Group of orthologs #141. Best score 664 bits
Score difference with first non-orthologous sequence - C.neoformans:664 T.rubripes:424

Q5KGS9              	100.00%		H2U260              	100.00%
                    	       		H2SIS0              	13.40%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for H2U260 as seed ortholog is 100%.

Group of orthologs #142. Best score 664 bits
Score difference with first non-orthologous sequence - C.neoformans:664 T.rubripes:664

P0CM96              	100.00%		H2UIT0              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for H2UIT0 as seed ortholog is 100%.

Group of orthologs #143. Best score 663 bits
Score difference with first non-orthologous sequence - C.neoformans:419 T.rubripes:295

P0CQ98              	100.00%		H2TCC8              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for H2TCC8 as seed ortholog is 100%.

Group of orthologs #144. Best score 663 bits
Score difference with first non-orthologous sequence - C.neoformans:663 T.rubripes:663

Q5KI64              	100.00%		H2UGF7              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for H2UGF7 as seed ortholog is 100%.

Group of orthologs #145. Best score 663 bits
Score difference with first non-orthologous sequence - C.neoformans:663 T.rubripes:663

Q5KE94              	100.00%		P53451              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for P53451 as seed ortholog is 100%.

Group of orthologs #146. Best score 663 bits
Score difference with first non-orthologous sequence - C.neoformans:663 T.rubripes:453

Q5KM37              	100.00%		H2VAZ1              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for H2VAZ1 as seed ortholog is 100%.

Group of orthologs #147. Best score 661 bits
Score difference with first non-orthologous sequence - C.neoformans:661 T.rubripes:661

Q5KNE7              	100.00%		H2U9Z1              	100.00%
Bootstrap support for Q5KNE7 as seed ortholog is 100%.
Bootstrap support for H2U9Z1 as seed ortholog is 100%.

Group of orthologs #148. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 T.rubripes:660

Q5KDR3              	100.00%		H2RQI7              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for H2RQI7 as seed ortholog is 100%.

Group of orthologs #149. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 T.rubripes:660

Q5K6X3              	100.00%		H2S9W7              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for H2S9W7 as seed ortholog is 100%.

Group of orthologs #150. Best score 658 bits
Score difference with first non-orthologous sequence - C.neoformans:658 T.rubripes:404

Q5KLG5              	100.00%		H2SYP6              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for H2SYP6 as seed ortholog is 100%.

Group of orthologs #151. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:657 T.rubripes:657

Q5KIN6              	100.00%		H2SIU7              	100.00%
                    	       		H2UPV5              	82.30%
                    	       		H2SIZ2              	22.58%
                    	       		H2TBU8              	16.27%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for H2SIU7 as seed ortholog is 100%.

Group of orthologs #152. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:656 T.rubripes:577

Q5K8L8              	100.00%		H2S1S4              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for H2S1S4 as seed ortholog is 100%.

Group of orthologs #153. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 T.rubripes:601

Q5K9H1              	100.00%		H2RM91              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for H2RM91 as seed ortholog is 100%.

Group of orthologs #154. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 T.rubripes:654

Q5KP26              	100.00%		H2UWL6              	100.00%
Bootstrap support for Q5KP26 as seed ortholog is 100%.
Bootstrap support for H2UWL6 as seed ortholog is 100%.

Group of orthologs #155. Best score 653 bits
Score difference with first non-orthologous sequence - C.neoformans:565 T.rubripes:653

Q5KLI3              	100.00%		H2UI57              	100.00%
                    	       		H2SRU3              	11.58%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for H2UI57 as seed ortholog is 100%.

Group of orthologs #156. Best score 651 bits
Score difference with first non-orthologous sequence - C.neoformans:651 T.rubripes:651

Q5KAN4              	100.00%		H2TX46              	100.00%
                    	       		H2TT43              	46.76%
                    	       		H2UVB2              	40.49%
Bootstrap support for Q5KAN4 as seed ortholog is 100%.
Bootstrap support for H2TX46 as seed ortholog is 100%.

Group of orthologs #157. Best score 651 bits
Score difference with first non-orthologous sequence - C.neoformans:651 T.rubripes:380

Q5KFJ3              	100.00%		H2UJM4              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for H2UJM4 as seed ortholog is 100%.

Group of orthologs #158. Best score 650 bits
Score difference with first non-orthologous sequence - C.neoformans:650 T.rubripes:579

Q5KKR7              	100.00%		H2SLB7              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for H2SLB7 as seed ortholog is 100%.

Group of orthologs #159. Best score 649 bits
Score difference with first non-orthologous sequence - C.neoformans:649 T.rubripes:649

Q5KLU5              	100.00%		H2S2N6              	100.00%
                    	       		H2UUF9              	60.55%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for H2S2N6 as seed ortholog is 100%.

Group of orthologs #160. Best score 649 bits
Score difference with first non-orthologous sequence - C.neoformans:649 T.rubripes:137

Q5KLI4              	100.00%		H2UZG9              	100.00%
                    	       		H2TDR3              	27.58%
Bootstrap support for Q5KLI4 as seed ortholog is 100%.
Bootstrap support for H2UZG9 as seed ortholog is 99%.

Group of orthologs #161. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 T.rubripes:646

Q5KKV6              	100.00%		H2SFA5              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for H2SFA5 as seed ortholog is 100%.

Group of orthologs #162. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 T.rubripes:646

Q5KBI1              	100.00%		H2TM61              	100.00%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for H2TM61 as seed ortholog is 100%.

Group of orthologs #163. Best score 642 bits
Score difference with first non-orthologous sequence - C.neoformans:642 T.rubripes:497

Q5KDL3              	100.00%		H2S375              	100.00%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for H2S375 as seed ortholog is 100%.

Group of orthologs #164. Best score 642 bits
Score difference with first non-orthologous sequence - C.neoformans:642 T.rubripes:642

Q5KIL6              	100.00%		H2U8I0              	100.00%
Bootstrap support for Q5KIL6 as seed ortholog is 100%.
Bootstrap support for H2U8I0 as seed ortholog is 100%.

Group of orthologs #165. Best score 641 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubripes:414

Q5K9Z4              	100.00%		H2ULC6              	100.00%
Bootstrap support for Q5K9Z4 as seed ortholog is 100%.
Bootstrap support for H2ULC6 as seed ortholog is 100%.

Group of orthologs #166. Best score 639 bits
Score difference with first non-orthologous sequence - C.neoformans:639 T.rubripes:639

Q5KC69              	100.00%		H2TCB5              	100.00%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for H2TCB5 as seed ortholog is 100%.

Group of orthologs #167. Best score 638 bits
Score difference with first non-orthologous sequence - C.neoformans:425 T.rubripes:367

Q5KE58              	100.00%		H2SDT8              	100.00%
Bootstrap support for Q5KE58 as seed ortholog is 100%.
Bootstrap support for H2SDT8 as seed ortholog is 100%.

Group of orthologs #168. Best score 637 bits
Score difference with first non-orthologous sequence - C.neoformans:637 T.rubripes:519

Q5K6Z8              	100.00%		H2SDY9              	100.00%
Bootstrap support for Q5K6Z8 as seed ortholog is 100%.
Bootstrap support for H2SDY9 as seed ortholog is 100%.

Group of orthologs #169. Best score 637 bits
Score difference with first non-orthologous sequence - C.neoformans:637 T.rubripes:637

Q5K9R3              	100.00%		H2TZH2              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for H2TZH2 as seed ortholog is 100%.

Group of orthologs #170. Best score 634 bits
Score difference with first non-orthologous sequence - C.neoformans:443 T.rubripes:449

P0CQ72              	100.00%		H2TWV1              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for H2TWV1 as seed ortholog is 100%.

Group of orthologs #171. Best score 633 bits
Score difference with first non-orthologous sequence - C.neoformans:633 T.rubripes:633

Q5K7B5              	100.00%		H2VDZ6              	100.00%
                    	       		H2RUJ3              	33.88%
                    	       		H2UG44              	19.75%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for H2VDZ6 as seed ortholog is 100%.

Group of orthologs #172. Best score 630 bits
Score difference with first non-orthologous sequence - C.neoformans:630 T.rubripes:630

Q5KEU7              	100.00%		H2S3L7              	100.00%
Bootstrap support for Q5KEU7 as seed ortholog is 100%.
Bootstrap support for H2S3L7 as seed ortholog is 100%.

Group of orthologs #173. Best score 630 bits
Score difference with first non-orthologous sequence - C.neoformans:630 T.rubripes:490

Q5K8D2              	100.00%		H2T591              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for H2T591 as seed ortholog is 100%.

Group of orthologs #174. Best score 630 bits
Score difference with first non-orthologous sequence - C.neoformans:630 T.rubripes:630

Q5KD08              	100.00%		H2TFF9              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for H2TFF9 as seed ortholog is 100%.

Group of orthologs #175. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:448 T.rubripes:276

Q5K745              	100.00%		H2SKH0              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for H2SKH0 as seed ortholog is 100%.

Group of orthologs #176. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 T.rubripes:628

P0CQ22              	100.00%		H2RWI6              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for H2RWI6 as seed ortholog is 100%.

Group of orthologs #177. Best score 627 bits
Score difference with first non-orthologous sequence - C.neoformans:627 T.rubripes:627

Q5K9K1              	100.00%		H2U230              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for H2U230 as seed ortholog is 100%.

Group of orthologs #178. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 T.rubripes:626

Q5KCT5              	100.00%		H2SPC0              	100.00%
Bootstrap support for Q5KCT5 as seed ortholog is 100%.
Bootstrap support for H2SPC0 as seed ortholog is 100%.

Group of orthologs #179. Best score 623 bits
Score difference with first non-orthologous sequence - C.neoformans:623 T.rubripes:623

Q5KIH6              	100.00%		H2SDK7              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for H2SDK7 as seed ortholog is 100%.

Group of orthologs #180. Best score 623 bits
Score difference with first non-orthologous sequence - C.neoformans:623 T.rubripes:623

Q5KE09              	100.00%		H2URF5              	100.00%
Bootstrap support for Q5KE09 as seed ortholog is 100%.
Bootstrap support for H2URF5 as seed ortholog is 100%.

Group of orthologs #181. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:620 T.rubripes:76

Q5KCZ4              	100.00%		H2U4H4              	100.00%
                    	       		H2TB46              	55.34%
                    	       		H2RU51              	46.72%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for H2U4H4 as seed ortholog is 95%.

Group of orthologs #182. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:620 T.rubripes:620

Q5KKP9              	100.00%		H2RYT6              	100.00%
                    	       		H2SAK8              	17.08%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for H2RYT6 as seed ortholog is 100%.

Group of orthologs #183. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:620 T.rubripes:473

Q5KAP2              	100.00%		H2SMC5              	100.00%
Bootstrap support for Q5KAP2 as seed ortholog is 100%.
Bootstrap support for H2SMC5 as seed ortholog is 100%.

Group of orthologs #184. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:619 T.rubripes:619

Q5KLW7              	100.00%		H2USE5              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for H2USE5 as seed ortholog is 100%.

Group of orthologs #185. Best score 616 bits
Score difference with first non-orthologous sequence - C.neoformans:616 T.rubripes:616

Q5KBW0              	100.00%		H2VEU6              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for H2VEU6 as seed ortholog is 100%.

Group of orthologs #186. Best score 614 bits
Score difference with first non-orthologous sequence - C.neoformans:614 T.rubripes:614

Q5KFG6              	100.00%		H2SP70              	100.00%
Bootstrap support for Q5KFG6 as seed ortholog is 100%.
Bootstrap support for H2SP70 as seed ortholog is 100%.

Group of orthologs #187. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubripes:121

Q5KKV8              	100.00%		H2T9M7              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 93%.
Bootstrap support for H2T9M7 as seed ortholog is 99%.

Group of orthologs #188. Best score 612 bits
Score difference with first non-orthologous sequence - C.neoformans:612 T.rubripes:612

P0CS34              	100.00%		H2RKD4              	100.00%
Bootstrap support for P0CS34 as seed ortholog is 100%.
Bootstrap support for H2RKD4 as seed ortholog is 100%.

Group of orthologs #189. Best score 610 bits
Score difference with first non-orthologous sequence - C.neoformans:399 T.rubripes:335

P0CQ84              	100.00%		H2SML8              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for H2SML8 as seed ortholog is 100%.

Group of orthologs #190. Best score 610 bits
Score difference with first non-orthologous sequence - C.neoformans:499 T.rubripes:610

Q5KBB1              	100.00%		H2V6Z7              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for H2V6Z7 as seed ortholog is 100%.

Group of orthologs #191. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:609 T.rubripes:59

Q5KC94              	100.00%		H2TZN2              	100.00%
                    	       		H2V9K3              	40.45%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for H2TZN2 as seed ortholog is 87%.

Group of orthologs #192. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:609 T.rubripes:609

P0CR26              	100.00%		H2TNQ1              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for H2TNQ1 as seed ortholog is 100%.

Group of orthologs #193. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:431 T.rubripes:483

Q5KII1              	100.00%		H2T8S1              	100.00%
Bootstrap support for Q5KII1 as seed ortholog is 100%.
Bootstrap support for H2T8S1 as seed ortholog is 100%.

Group of orthologs #194. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:609 T.rubripes:609

Q5KQ45              	100.00%		H2UPT3              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for H2UPT3 as seed ortholog is 100%.

Group of orthologs #195. Best score 608 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:363

P0CQ88              	100.00%		H2RLQ7              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 100%.
Bootstrap support for H2RLQ7 as seed ortholog is 100%.

Group of orthologs #196. Best score 608 bits
Score difference with first non-orthologous sequence - C.neoformans:608 T.rubripes:608

Q5KCZ2              	100.00%		H2TZM1              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for H2TZM1 as seed ortholog is 100%.

Group of orthologs #197. Best score 607 bits
Score difference with first non-orthologous sequence - C.neoformans:607 T.rubripes:607

P0CR28              	100.00%		H2SIJ9              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for H2SIJ9 as seed ortholog is 100%.

Group of orthologs #198. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubripes:232

P0CQ76              	100.00%		H2RZ57              	100.00%
                    	       		H2TL42              	26.91%
Bootstrap support for P0CQ76 as seed ortholog is 100%.
Bootstrap support for H2RZ57 as seed ortholog is 100%.

Group of orthologs #199. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:606 T.rubripes:125

Q5KKT5              	100.00%		H2S6P6              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for H2S6P6 as seed ortholog is 99%.

Group of orthologs #200. Best score 603 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:339

Q5KIC0              	100.00%		H2USS3              	100.00%
                    	       		H2RTV5              	71.03%
                    	       		H2SQ81              	62.42%
                    	       		H2T8J2              	56.49%
                    	       		H2SE55              	36.55%
Bootstrap support for Q5KIC0 as seed ortholog is 99%.
Bootstrap support for H2USS3 as seed ortholog is 100%.

Group of orthologs #201. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:401 T.rubripes:402

P0CQ70              	100.00%		H2SMS0              	100.00%
                    	       		H2RXZ9              	18.40%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for H2SMS0 as seed ortholog is 100%.

Group of orthologs #202. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:596 T.rubripes:164

P0CL92              	100.00%		H2TBY5              	100.00%
Bootstrap support for P0CL92 as seed ortholog is 100%.
Bootstrap support for H2TBY5 as seed ortholog is 99%.

Group of orthologs #203. Best score 595 bits
Score difference with first non-orthologous sequence - C.neoformans:595 T.rubripes:395

Q5KDW0              	100.00%		H2TL70              	100.00%
                    	       		H2VDM0              	37.37%
                    	       		H2S4P7              	30.25%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for H2TL70 as seed ortholog is 100%.

Group of orthologs #204. Best score 595 bits
Score difference with first non-orthologous sequence - C.neoformans:595 T.rubripes:595

Q5KFS5              	100.00%		H2V721              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for H2V721 as seed ortholog is 100%.

Group of orthologs #205. Best score 594 bits
Score difference with first non-orthologous sequence - C.neoformans:594 T.rubripes:594

P0CO94              	100.00%		H2SVA5              	100.00%
Bootstrap support for P0CO94 as seed ortholog is 100%.
Bootstrap support for H2SVA5 as seed ortholog is 100%.

Group of orthologs #206. Best score 594 bits
Score difference with first non-orthologous sequence - C.neoformans:594 T.rubripes:594

Q5K7K5              	100.00%		H2UHB2              	100.00%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for H2UHB2 as seed ortholog is 100%.

Group of orthologs #207. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:592 T.rubripes:450

Q5KLV5              	100.00%		H2SUR5              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for H2SUR5 as seed ortholog is 100%.

Group of orthologs #208. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 T.rubripes:430

Q5KP44              	100.00%		H2TMF1              	100.00%
                    	       		H2U9T6              	59.02%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for H2TMF1 as seed ortholog is 100%.

Group of orthologs #209. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:138

Q5KF65              	100.00%		H2SKE2              	100.00%
                    	       		H2SW40              	100.00%
Bootstrap support for Q5KF65 as seed ortholog is 97%.
Bootstrap support for H2SKE2 as seed ortholog is 99%.
Bootstrap support for H2SW40 as seed ortholog is 99%.

Group of orthologs #210. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 T.rubripes:585

Q5KIZ9              	100.00%		H2RMC0              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for H2RMC0 as seed ortholog is 100%.

Group of orthologs #211. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 T.rubripes:165

Q5KAU0              	100.00%		H2SBE8              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 100%.
Bootstrap support for H2SBE8 as seed ortholog is 99%.

Group of orthologs #212. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 T.rubripes:585

Q5KJR9              	100.00%		H2RQE4              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for H2RQE4 as seed ortholog is 100%.

Group of orthologs #213. Best score 584 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubripes:440

Q5KME1              	100.00%		H2SR71              	100.00%
                    	       		H2SZB7              	100.00%
                    	       		H2UTX1              	29.91%
                    	       		H2TBS2              	15.89%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for H2SR71 as seed ortholog is 100%.
Bootstrap support for H2SZB7 as seed ortholog is 100%.

Group of orthologs #214. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:368

Q5KK89              	100.00%		H2STW1              	100.00%
                    	       		H2TBQ5              	41.08%
Bootstrap support for Q5KK89 as seed ortholog is 99%.
Bootstrap support for H2STW1 as seed ortholog is 100%.

Group of orthologs #215. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 T.rubripes:326

Q5KQ07              	100.00%		H2RU73              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for H2RU73 as seed ortholog is 100%.

Group of orthologs #216. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:513 T.rubripes:23

Q5KN48              	100.00%		H2T8B5              	100.00%
                    	       		H2TZK7              	38.12%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for H2T8B5 as seed ortholog is 57%.
Alternative seed ortholog is H2TTH6 (23 bits away from this cluster)

Group of orthologs #217. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 T.rubripes:579

Q5K9Q6              	100.00%		H2SPV9              	100.00%
                    	       		H2RTB1              	10.80%
Bootstrap support for Q5K9Q6 as seed ortholog is 100%.
Bootstrap support for H2SPV9 as seed ortholog is 100%.

Group of orthologs #218. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:351 T.rubripes:579

P0CO92              	100.00%		H2UG35              	100.00%
Bootstrap support for P0CO92 as seed ortholog is 100%.
Bootstrap support for H2UG35 as seed ortholog is 100%.

Group of orthologs #219. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 T.rubripes:579

Q5KMG4              	100.00%		H2VCX9              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for H2VCX9 as seed ortholog is 100%.

Group of orthologs #220. Best score 578 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubripes:578

Q5KAC2              	100.00%		H2SSP6              	100.00%
                    	       		H2VEW2              	64.39%
                    	       		H2V2X3              	33.69%
                    	       		H2SQU3              	32.41%
Bootstrap support for Q5KAC2 as seed ortholog is 100%.
Bootstrap support for H2SSP6 as seed ortholog is 100%.

Group of orthologs #221. Best score 578 bits
Score difference with first non-orthologous sequence - C.neoformans:578 T.rubripes:578

Q5K899              	100.00%		H2TGT7              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for H2TGT7 as seed ortholog is 100%.

Group of orthologs #222. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:577 T.rubripes:577

P0CP36              	100.00%		H2T6K1              	100.00%
                    	       		H2RQ32              	22.69%
Bootstrap support for P0CP36 as seed ortholog is 100%.
Bootstrap support for H2T6K1 as seed ortholog is 100%.

Group of orthologs #223. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:577 T.rubripes:448

Q5K7R3              	100.00%		H2T0R7              	100.00%
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for H2T0R7 as seed ortholog is 100%.

Group of orthologs #224. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:576 T.rubripes:576

Q5KK44              	100.00%		H2RWV9              	100.00%
Q5KK43              	50.67%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for H2RWV9 as seed ortholog is 100%.

Group of orthologs #225. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 T.rubripes:411

Q5KA27              	100.00%		H2TF38              	100.00%
Bootstrap support for Q5KA27 as seed ortholog is 100%.
Bootstrap support for H2TF38 as seed ortholog is 100%.

Group of orthologs #226. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 T.rubripes:361

Q5KHR6              	100.00%		H2T2U6              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for H2T2U6 as seed ortholog is 100%.

Group of orthologs #227. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:571 T.rubripes:137

Q5KHZ4              	100.00%		H2TLL4              	100.00%
                    	       		H2V7L3              	46.37%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for H2TLL4 as seed ortholog is 99%.

Group of orthologs #228. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubripes:341

Q5K7L0              	100.00%		H2SUI0              	100.00%
Bootstrap support for Q5K7L0 as seed ortholog is 100%.
Bootstrap support for H2SUI0 as seed ortholog is 100%.

Group of orthologs #229. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:571 T.rubripes:571

Q5KBH1              	100.00%		H2T3Z3              	100.00%
Bootstrap support for Q5KBH1 as seed ortholog is 100%.
Bootstrap support for H2T3Z3 as seed ortholog is 100%.

Group of orthologs #230. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubripes:335

P0CQ80              	100.00%		H2TZ37              	100.00%
                    	       		H2U3H1              	48.86%
Bootstrap support for P0CQ80 as seed ortholog is 100%.
Bootstrap support for H2TZ37 as seed ortholog is 100%.

Group of orthologs #231. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 T.rubripes:509

Q5KIW8              	100.00%		H2S2P6              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for H2S2P6 as seed ortholog is 100%.

Group of orthologs #232. Best score 566 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubripes:159

Q5K960              	100.00%		H2RKZ7              	100.00%
Bootstrap support for Q5K960 as seed ortholog is 100%.
Bootstrap support for H2RKZ7 as seed ortholog is 99%.

Group of orthologs #233. Best score 566 bits
Score difference with first non-orthologous sequence - C.neoformans:566 T.rubripes:214

Q5KMQ2              	100.00%		H2TAW5              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for H2TAW5 as seed ortholog is 99%.

Group of orthologs #234. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:565 T.rubripes:244

Q5KB93              	100.00%		H2SGG3              	100.00%
                    	       		H2TY35              	47.90%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for H2SGG3 as seed ortholog is 100%.

Group of orthologs #235. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:565 T.rubripes:565

Q5KEN6              	100.00%		H2U9D0              	100.00%
                    	       		H2VCT7              	51.38%
Bootstrap support for Q5KEN6 as seed ortholog is 100%.
Bootstrap support for H2U9D0 as seed ortholog is 100%.

Group of orthologs #236. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubripes:564

Q5KLA7              	100.00%		H2TDQ9              	100.00%
                    	       		H2UN91              	57.14%
                    	       		H2RJX4              	23.05%
Bootstrap support for Q5KLA7 as seed ortholog is 99%.
Bootstrap support for H2TDQ9 as seed ortholog is 100%.

Group of orthologs #237. Best score 561 bits
Score difference with first non-orthologous sequence - C.neoformans:386 T.rubripes:376

Q5KBN2              	100.00%		H2TQJ7              	100.00%
Q5KIR5              	8.78%		
Bootstrap support for Q5KBN2 as seed ortholog is 100%.
Bootstrap support for H2TQJ7 as seed ortholog is 100%.

Group of orthologs #238. Best score 561 bits
Score difference with first non-orthologous sequence - C.neoformans:561 T.rubripes:561

Q5K7C3              	100.00%		H2UP05              	100.00%
Bootstrap support for Q5K7C3 as seed ortholog is 100%.
Bootstrap support for H2UP05 as seed ortholog is 100%.

Group of orthologs #239. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 T.rubripes:102

P0CQ16              	100.00%		H2SW74              	100.00%
Bootstrap support for P0CQ16 as seed ortholog is 100%.
Bootstrap support for H2SW74 as seed ortholog is 99%.

Group of orthologs #240. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubripes:128

Q5KLG6              	100.00%		H2T7R6              	100.00%
Bootstrap support for Q5KLG6 as seed ortholog is 100%.
Bootstrap support for H2T7R6 as seed ortholog is 97%.

Group of orthologs #241. Best score 556 bits
Score difference with first non-orthologous sequence - C.neoformans:332 T.rubripes:267

P0CQ74              	100.00%		H2UFU0              	100.00%
                    	       		H2S9M6              	61.84%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for H2UFU0 as seed ortholog is 100%.

Group of orthologs #242. Best score 555 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:436

Q5KGH3              	100.00%		H2T5N4              	100.00%
                    	       		H2TU36              	67.35%
Bootstrap support for Q5KGH3 as seed ortholog is 100%.
Bootstrap support for H2T5N4 as seed ortholog is 100%.

Group of orthologs #243. Best score 555 bits
Score difference with first non-orthologous sequence - C.neoformans:555 T.rubripes:555

Q5K757              	100.00%		H2S5N0              	100.00%
Bootstrap support for Q5K757 as seed ortholog is 100%.
Bootstrap support for H2S5N0 as seed ortholog is 100%.

Group of orthologs #244. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 T.rubripes:145

Q5KE28              	100.00%		H2TD79              	100.00%
Bootstrap support for Q5KE28 as seed ortholog is 100%.
Bootstrap support for H2TD79 as seed ortholog is 99%.

Group of orthologs #245. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 T.rubripes:397

Q5KHN7              	100.00%		H2V079              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for H2V079 as seed ortholog is 100%.

Group of orthologs #246. Best score 553 bits
Score difference with first non-orthologous sequence - C.neoformans:553 T.rubripes:154

Q5KKU4              	100.00%		H2RUB0              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for H2RUB0 as seed ortholog is 99%.

Group of orthologs #247. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 T.rubripes:467

P0CP46              	100.00%		H2TX53              	100.00%
                    	       		H2S8X2              	72.58%
                    	       		H2SPP9              	51.66%
                    	       		H2TTH5              	40.58%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for H2TX53 as seed ortholog is 100%.

Group of orthologs #248. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 T.rubripes:212

Q5KAU9              	100.00%		H2SSS8              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for H2SSS8 as seed ortholog is 100%.

Group of orthologs #249. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 T.rubripes:552

Q5KKA5              	100.00%		H2TVH3              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for H2TVH3 as seed ortholog is 100%.

Group of orthologs #250. Best score 550 bits
Score difference with first non-orthologous sequence - C.neoformans:550 T.rubripes:235

Q5KIA2              	100.00%		H2SUT3              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for H2SUT3 as seed ortholog is 99%.

Group of orthologs #251. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 T.rubripes:549

Q5KLT9              	100.00%		H2SPF4              	100.00%
Bootstrap support for Q5KLT9 as seed ortholog is 100%.
Bootstrap support for H2SPF4 as seed ortholog is 100%.

Group of orthologs #252. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:399 T.rubripes:375

P0CQ96              	100.00%		H2UC31              	100.00%
Bootstrap support for P0CQ96 as seed ortholog is 100%.
Bootstrap support for H2UC31 as seed ortholog is 100%.

Group of orthologs #253. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 T.rubripes:474

Q5KDZ3              	100.00%		H2VD24              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 100%.
Bootstrap support for H2VD24 as seed ortholog is 100%.

Group of orthologs #254. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 T.rubripes:401

Q5K722              	100.00%		H2S842              	100.00%
                    	       		H2UBY6              	30.30%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for H2S842 as seed ortholog is 100%.

Group of orthologs #255. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 T.rubripes:545

Q5KI16              	100.00%		H2SMJ4              	100.00%
                    	       		H2V6Y9              	32.02%
Bootstrap support for Q5KI16 as seed ortholog is 100%.
Bootstrap support for H2SMJ4 as seed ortholog is 100%.

Group of orthologs #256. Best score 544 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:336

Q5KGF6              	100.00%		H2S681              	100.00%
                    	       		H2TUM7              	52.81%
                    	       		H2SQ02              	45.57%
Bootstrap support for Q5KGF6 as seed ortholog is 78%.
Bootstrap support for H2S681 as seed ortholog is 100%.

Group of orthologs #257. Best score 543 bits
Score difference with first non-orthologous sequence - C.neoformans:543 T.rubripes:543

Q5KKB8              	100.00%		H2T0T9              	100.00%
                    	       		H2TLJ4              	19.91%
                    	       		H2T227              	16.24%
Bootstrap support for Q5KKB8 as seed ortholog is 100%.
Bootstrap support for H2T0T9 as seed ortholog is 100%.

Group of orthologs #258. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:542 T.rubripes:542

Q5KHN4              	100.00%		H2RXZ1              	100.00%
                    	       		H2UAB6              	32.11%
                    	       		H2RKM2              	31.53%
Bootstrap support for Q5KHN4 as seed ortholog is 100%.
Bootstrap support for H2RXZ1 as seed ortholog is 100%.

Group of orthologs #259. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:542 T.rubripes:105

Q5KP62              	100.00%		H2T832              	100.00%
                    	       		H2TTB1              	30.62%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for H2T832 as seed ortholog is 99%.

Group of orthologs #260. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 T.rubripes:296

Q5KHV9              	100.00%		H2TQ53              	100.00%
                    	       		O73723              	100.00%
                    	       		H2SP36              	77.40%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for H2TQ53 as seed ortholog is 100%.
Bootstrap support for O73723 as seed ortholog is 100%.

Group of orthologs #261. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:534 T.rubripes:534

Q5K9E3              	100.00%		H2RJI8              	100.00%
                    	       		H2STL6              	41.72%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for H2RJI8 as seed ortholog is 100%.

Group of orthologs #262. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:534 T.rubripes:534

Q5KJI4              	100.00%		H2UUL2              	100.00%
Bootstrap support for Q5KJI4 as seed ortholog is 100%.
Bootstrap support for H2UUL2 as seed ortholog is 100%.

Group of orthologs #263. Best score 533 bits
Score difference with first non-orthologous sequence - C.neoformans:533 T.rubripes:533

Q5K749              	100.00%		H2S8G2              	100.00%
Bootstrap support for Q5K749 as seed ortholog is 100%.
Bootstrap support for H2S8G2 as seed ortholog is 100%.

Group of orthologs #264. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:532 T.rubripes:532

Q5KI46              	100.00%		H2ULD7              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for H2ULD7 as seed ortholog is 100%.

Group of orthologs #265. Best score 531 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:531

Q5KHJ1              	100.00%		H2TDG2              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 99%.
Bootstrap support for H2TDG2 as seed ortholog is 100%.

Group of orthologs #266. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 T.rubripes:272

P0CM88              	100.00%		H2UF31              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for H2UF31 as seed ortholog is 100%.

Group of orthologs #267. Best score 528 bits
Score difference with first non-orthologous sequence - C.neoformans:528 T.rubripes:528

Q5KK90              	100.00%		H2TGM2              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for H2TGM2 as seed ortholog is 100%.

Group of orthologs #268. Best score 528 bits
Score difference with first non-orthologous sequence - C.neoformans:528 T.rubripes:452

Q5KKB4              	100.00%		H2V3Z3              	100.00%
Bootstrap support for Q5KKB4 as seed ortholog is 100%.
Bootstrap support for H2V3Z3 as seed ortholog is 100%.

Group of orthologs #269. Best score 527 bits
Score difference with first non-orthologous sequence - C.neoformans:527 T.rubripes:527

P0CQ08              	100.00%		H2UHN6              	100.00%
Bootstrap support for P0CQ08 as seed ortholog is 100%.
Bootstrap support for H2UHN6 as seed ortholog is 100%.

Group of orthologs #270. Best score 527 bits
Score difference with first non-orthologous sequence - C.neoformans:527 T.rubripes:228

Q5KLJ0              	100.00%		H2UNJ8              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for H2UNJ8 as seed ortholog is 100%.

Group of orthologs #271. Best score 522 bits
Score difference with first non-orthologous sequence - C.neoformans:522 T.rubripes:522

Q5KF37              	100.00%		H2SRH6              	100.00%
                    	       		H2TN41              	59.14%
                    	       		H2RM13              	56.35%
                    	       		H2T3T1              	48.48%
Bootstrap support for Q5KF37 as seed ortholog is 100%.
Bootstrap support for H2SRH6 as seed ortholog is 100%.

Group of orthologs #272. Best score 521 bits
Score difference with first non-orthologous sequence - C.neoformans:521 T.rubripes:372

Q5KDQ7              	100.00%		H2T7X1              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for H2T7X1 as seed ortholog is 100%.

Group of orthologs #273. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubripes:517

Q5KB99              	100.00%		H2U2V2              	100.00%
                    	       		H2RMK7              	60.42%
                    	       		H2RRT7              	25.29%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for H2U2V2 as seed ortholog is 100%.

Group of orthologs #274. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubripes:517

Q5KK33              	100.00%		H2U7E1              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for H2U7E1 as seed ortholog is 100%.

Group of orthologs #275. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:81

Q5KEX3              	100.00%		H2UGI1              	100.00%
                    	       		H2V8Z1              	28.39%
                    	       		H2VDI6              	13.54%
                    	       		H2RTR2              	13.54%
Bootstrap support for Q5KEX3 as seed ortholog is 93%.
Bootstrap support for H2UGI1 as seed ortholog is 97%.

Group of orthologs #276. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 T.rubripes:262

Q5KC30              	100.00%		H2S5W7              	100.00%
                    	       		H2UWP5              	46.09%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for H2S5W7 as seed ortholog is 100%.

Group of orthologs #277. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 T.rubripes:514

Q5KE01              	100.00%		H2SMR8              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for H2SMR8 as seed ortholog is 100%.

Group of orthologs #278. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 T.rubripes:512

Q5KGK2              	100.00%		H2UQL9              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 100%.
Bootstrap support for H2UQL9 as seed ortholog is 100%.

Group of orthologs #279. Best score 511 bits
Score difference with first non-orthologous sequence - C.neoformans:511 T.rubripes:511

Q5KG72              	100.00%		H2V8A0              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for H2V8A0 as seed ortholog is 100%.

Group of orthologs #280. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 T.rubripes:510

P0CR40              	100.00%		H2TLU8              	100.00%
                    	       		H2TAN7              	46.18%
Bootstrap support for P0CR40 as seed ortholog is 100%.
Bootstrap support for H2TLU8 as seed ortholog is 100%.

Group of orthologs #281. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 T.rubripes:510

Q5K972              	100.00%		H2S4E0              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for H2S4E0 as seed ortholog is 100%.

Group of orthologs #282. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 T.rubripes:510

Q5KF87              	100.00%		H2RW02              	100.00%
Bootstrap support for Q5KF87 as seed ortholog is 100%.
Bootstrap support for H2RW02 as seed ortholog is 100%.

Group of orthologs #283. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 T.rubripes:510

Q5KII4              	100.00%		H2T8Z6              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for H2T8Z6 as seed ortholog is 100%.

Group of orthologs #284. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 T.rubripes:508

Q5KMC0              	100.00%		H2RWV7              	100.00%
Bootstrap support for Q5KMC0 as seed ortholog is 100%.
Bootstrap support for H2RWV7 as seed ortholog is 100%.

Group of orthologs #285. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 T.rubripes:507

Q5KGH1              	100.00%		H2SY48              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for H2SY48 as seed ortholog is 100%.

Group of orthologs #286. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 T.rubripes:507

Q5KFJ7              	100.00%		H2T1T5              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for H2T1T5 as seed ortholog is 100%.

Group of orthologs #287. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubripes:507

Q5K9A8              	100.00%		H2UBQ9              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 99%.
Bootstrap support for H2UBQ9 as seed ortholog is 100%.

Group of orthologs #288. Best score 506 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubripes:344

Q5KNA9              	100.00%		H2V788              	100.00%
Bootstrap support for Q5KNA9 as seed ortholog is 100%.
Bootstrap support for H2V788 as seed ortholog is 100%.

Group of orthologs #289. Best score 504 bits
Score difference with first non-orthologous sequence - C.neoformans:365 T.rubripes:371

Q5KF69              	100.00%		H2UX10              	100.00%
                    	       		H2S4D2              	58.77%
                    	       		H2T3W7              	26.15%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for H2UX10 as seed ortholog is 100%.

Group of orthologs #290. Best score 504 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubripes:128

Q5KJ82              	100.00%		H2TMN2              	100.00%
Bootstrap support for Q5KJ82 as seed ortholog is 100%.
Bootstrap support for H2TMN2 as seed ortholog is 99%.

Group of orthologs #291. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:503 T.rubripes:503

Q5KL04              	100.00%		H2U883              	100.00%
Bootstrap support for Q5KL04 as seed ortholog is 100%.
Bootstrap support for H2U883 as seed ortholog is 100%.

Group of orthologs #292. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 T.rubripes:501

Q5KM85              	100.00%		H2UD93              	100.00%
                    	       		H2SJJ5              	52.44%
                    	       		H2SFH3              	37.94%
Bootstrap support for Q5KM85 as seed ortholog is 100%.
Bootstrap support for H2UD93 as seed ortholog is 100%.

Group of orthologs #293. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:499 T.rubripes:499

Q5KAU8              	100.00%		H2S3L0              	100.00%
                    	       		H2SAC2              	20.04%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for H2S3L0 as seed ortholog is 100%.

Group of orthologs #294. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:85

Q5K9A0              	100.00%		H2SSR6              	100.00%
Bootstrap support for Q5K9A0 as seed ortholog is 99%.
Bootstrap support for H2SSR6 as seed ortholog is 93%.

Group of orthologs #295. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 T.rubripes:497

Q5KKG6              	100.00%		H2U592              	100.00%
                    	       		H2UME8              	100.00%
                    	       		H2SF71              	70.76%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for H2U592 as seed ortholog is 100%.
Bootstrap support for H2UME8 as seed ortholog is 100%.

Group of orthologs #296. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubripes:96

Q5K7X5              	100.00%		H2VAC0              	100.00%
Q5K826              	29.51%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for H2VAC0 as seed ortholog is 99%.

Group of orthologs #297. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:496 T.rubripes:496

P0CR52              	100.00%		H2RSG2              	100.00%
Bootstrap support for P0CR52 as seed ortholog is 100%.
Bootstrap support for H2RSG2 as seed ortholog is 100%.

Group of orthologs #298. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubripes:334

Q5KEK9              	100.00%		H2TFT5              	100.00%
                    	       		H2V9L7              	59.76%
                    	       		H2TXL0              	28.78%
Bootstrap support for Q5KEK9 as seed ortholog is 100%.
Bootstrap support for H2TFT5 as seed ortholog is 100%.

Group of orthologs #299. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:495 T.rubripes:213

Q5KFJ4              	100.00%		H2U4Y6              	100.00%
                    	       		H2V2N3              	51.45%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for H2U4Y6 as seed ortholog is 100%.

Group of orthologs #300. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:424 T.rubripes:106

Q5KPW4              	100.00%		H2VES7              	100.00%
Bootstrap support for Q5KPW4 as seed ortholog is 100%.
Bootstrap support for H2VES7 as seed ortholog is 99%.

Group of orthologs #301. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubripes:40

Q5KI40              	100.00%		H2TTF0              	100.00%
                    	       		H2V2R7              	80.83%
Bootstrap support for Q5KI40 as seed ortholog is 100%.
Bootstrap support for H2TTF0 as seed ortholog is 92%.

Group of orthologs #302. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 T.rubripes:494

P0CM38              	100.00%		H2S5C3              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for H2S5C3 as seed ortholog is 100%.

Group of orthologs #303. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 T.rubripes:139

Q5KI86              	100.00%		H2U163              	100.00%
                    	       		H2RNG1              	97.62%
                    	       		H2V772              	75.71%
                    	       		H2UY24              	75.24%
                    	       		H2TLF6              	20.00%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for H2U163 as seed ortholog is 99%.

Group of orthologs #304. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:493

P0CN74              	100.00%		H2S8H3              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 100%.
Bootstrap support for H2S8H3 as seed ortholog is 100%.

Group of orthologs #305. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 T.rubripes:493

Q5KGD7              	100.00%		H2SI79              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for H2SI79 as seed ortholog is 100%.

Group of orthologs #306. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 T.rubripes:493

P0CS78              	100.00%		H2V6Z5              	100.00%
Bootstrap support for P0CS78 as seed ortholog is 100%.
Bootstrap support for H2V6Z5 as seed ortholog is 100%.

Group of orthologs #307. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:412 T.rubripes:344

Q5KJC6              	100.00%		H2VAD4              	100.00%
                    	       		H2RJQ1              	39.47%
Bootstrap support for Q5KJC6 as seed ortholog is 100%.
Bootstrap support for H2VAD4 as seed ortholog is 100%.

Group of orthologs #308. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:356

Q5KP72              	100.00%		H2TWI2              	100.00%
Bootstrap support for Q5KP72 as seed ortholog is 99%.
Bootstrap support for H2TWI2 as seed ortholog is 100%.

Group of orthologs #309. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:488 T.rubripes:225

Q5KII9              	100.00%		H2U3D9              	100.00%
                    	       		H2SKL8              	59.76%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for H2U3D9 as seed ortholog is 100%.

Group of orthologs #310. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:393 T.rubripes:164

Q5K7P9              	100.00%		H2URV7              	100.00%
                    	       		H2T6U6              	53.33%
                    	       		H2S2S1              	5.96%
Bootstrap support for Q5K7P9 as seed ortholog is 100%.
Bootstrap support for H2URV7 as seed ortholog is 99%.

Group of orthologs #311. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubripes:326

Q5KMR8              	100.00%		H2RYS5              	100.00%
                    	       		H2SSP0              	35.25%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for H2RYS5 as seed ortholog is 100%.

Group of orthologs #312. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 T.rubripes:336

P0CQ82              	100.00%		H2TS43              	100.00%
Bootstrap support for P0CQ82 as seed ortholog is 100%.
Bootstrap support for H2TS43 as seed ortholog is 100%.

Group of orthologs #313. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 T.rubripes:482

P0CP26              	100.00%		H2SI87              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for H2SI87 as seed ortholog is 100%.

Group of orthologs #314. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 T.rubripes:134

Q5KNC4              	100.00%		H2SNH7              	100.00%
Bootstrap support for Q5KNC4 as seed ortholog is 100%.
Bootstrap support for H2SNH7 as seed ortholog is 99%.

Group of orthologs #315. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 T.rubripes:158

Q5KKS9              	100.00%		H2TUE6              	100.00%
Bootstrap support for Q5KKS9 as seed ortholog is 100%.
Bootstrap support for H2TUE6 as seed ortholog is 99%.

Group of orthologs #316. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubripes:480

Q5KGI0              	100.00%		H2RQQ6              	100.00%
Bootstrap support for Q5KGI0 as seed ortholog is 100%.
Bootstrap support for H2RQQ6 as seed ortholog is 100%.

Group of orthologs #317. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubripes:480

Q5K6V0              	100.00%		H2V486              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for H2V486 as seed ortholog is 100%.

Group of orthologs #318. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:479 T.rubripes:422

P0CS36              	100.00%		H2RMQ7              	100.00%
                    	       		H2TYP2              	73.83%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for H2RMQ7 as seed ortholog is 100%.

Group of orthologs #319. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:479

Q5KHM9              	100.00%		H2U5X8              	100.00%
                    	       		H2UXH5              	31.27%
Bootstrap support for Q5KHM9 as seed ortholog is 99%.
Bootstrap support for H2U5X8 as seed ortholog is 100%.

Group of orthologs #320. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:479 T.rubripes:479

Q5KIA5              	100.00%		H2UIZ1              	100.00%
Bootstrap support for Q5KIA5 as seed ortholog is 100%.
Bootstrap support for H2UIZ1 as seed ortholog is 100%.

Group of orthologs #321. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:387 T.rubripes:478

Q5KCK2              	100.00%		H2UTS7              	100.00%
                    	       		H2RTS0              	28.58%
Bootstrap support for Q5KCK2 as seed ortholog is 100%.
Bootstrap support for H2UTS7 as seed ortholog is 100%.

Group of orthologs #322. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 T.rubripes:367

Q5KNC3              	100.00%		H2SD86              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for H2SD86 as seed ortholog is 100%.

Group of orthologs #323. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:162

Q5KAF1              	100.00%		H2UQD9              	100.00%
Bootstrap support for Q5KAF1 as seed ortholog is 85%.
Bootstrap support for H2UQD9 as seed ortholog is 99%.

Group of orthologs #324. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 T.rubripes:369

Q5KF96              	100.00%		H2V180              	100.00%
Bootstrap support for Q5KF96 as seed ortholog is 100%.
Bootstrap support for H2V180 as seed ortholog is 100%.

Group of orthologs #325. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 T.rubripes:290

Q5KDP3              	100.00%		P54996              	100.00%
                    	       		H2RSV1              	80.26%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for P54996 as seed ortholog is 100%.

Group of orthologs #326. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 T.rubripes:476

Q5KKJ5              	100.00%		H2TJR7              	100.00%
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for H2TJR7 as seed ortholog is 100%.

Group of orthologs #327. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 T.rubripes:473

Q5KPT1              	100.00%		H2U735              	100.00%
                    	       		H2UC28              	16.10%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for H2U735 as seed ortholog is 100%.

Group of orthologs #328. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubripes:329

Q5KCJ8              	100.00%		H2RMD4              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for H2RMD4 as seed ortholog is 100%.

Group of orthologs #329. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubripes:473

Q5K8Q2              	100.00%		H2TK85              	100.00%
Bootstrap support for Q5K8Q2 as seed ortholog is 100%.
Bootstrap support for H2TK85 as seed ortholog is 100%.

Group of orthologs #330. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:472 T.rubripes:345

Q5KG46              	100.00%		H2V242              	100.00%
Bootstrap support for Q5KG46 as seed ortholog is 100%.
Bootstrap support for H2V242 as seed ortholog is 100%.

Group of orthologs #331. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:344 T.rubripes:342

Q5KHS6              	100.00%		H2RTF9              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 100%.
Bootstrap support for H2RTF9 as seed ortholog is 100%.

Group of orthologs #332. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 T.rubripes:470

Q5KNR0              	100.00%		H2U4N0              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for H2U4N0 as seed ortholog is 100%.

Group of orthologs #333. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubripes:392

Q5K9L7              	100.00%		H2URV4              	100.00%
Q5KMG8              	31.72%		
Bootstrap support for Q5K9L7 as seed ortholog is 100%.
Bootstrap support for H2URV4 as seed ortholog is 100%.

Group of orthologs #334. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:468 T.rubripes:137

Q5KLK8              	100.00%		H2SSU4              	100.00%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for H2SSU4 as seed ortholog is 97%.

Group of orthologs #335. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:467 T.rubripes:156

Q5KPA1              	100.00%		H2UL24              	100.00%
Bootstrap support for Q5KPA1 as seed ortholog is 100%.
Bootstrap support for H2UL24 as seed ortholog is 99%.

Group of orthologs #336. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:388 T.rubripes:286

Q5KDR8              	100.00%		H2T7M2              	100.00%
Bootstrap support for Q5KDR8 as seed ortholog is 100%.
Bootstrap support for H2T7M2 as seed ortholog is 100%.

Group of orthologs #337. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:465 T.rubripes:174

Q5KH88              	100.00%		H2S4Z1              	100.00%
                    	       		H2SS08              	9.32%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for H2S4Z1 as seed ortholog is 99%.

Group of orthologs #338. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:465

Q5K9A9              	100.00%		H2T7T5              	100.00%
                    	       		H2ULR7              	17.26%
Bootstrap support for Q5K9A9 as seed ortholog is 95%.
Bootstrap support for H2T7T5 as seed ortholog is 100%.

Group of orthologs #339. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:383 T.rubripes:465

Q5KMP0              	100.00%		H2S117              	100.00%
Bootstrap support for Q5KMP0 as seed ortholog is 100%.
Bootstrap support for H2S117 as seed ortholog is 100%.

Group of orthologs #340. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:354 T.rubripes:214

Q5KP35              	100.00%		H2U8G6              	100.00%
Bootstrap support for Q5KP35 as seed ortholog is 100%.
Bootstrap support for H2U8G6 as seed ortholog is 100%.

Group of orthologs #341. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:463 T.rubripes:463

Q5K8F7              	100.00%		H2UM92              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for H2UM92 as seed ortholog is 100%.

Group of orthologs #342. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 T.rubripes:462

P0CN84              	100.00%		H2RRV9              	100.00%
                    	       		H2S0I5              	39.45%
Bootstrap support for P0CN84 as seed ortholog is 100%.
Bootstrap support for H2RRV9 as seed ortholog is 100%.

Group of orthologs #343. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 T.rubripes:462

Q5KJP4              	100.00%		H2TJD5              	100.00%
Bootstrap support for Q5KJP4 as seed ortholog is 100%.
Bootstrap support for H2TJD5 as seed ortholog is 100%.

Group of orthologs #344. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 T.rubripes:460

P0CQ34              	100.00%		H2RQH1              	100.00%
                    	       		H2UD20              	51.94%
                    	       		H2S3P4              	39.44%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for H2RQH1 as seed ortholog is 100%.

Group of orthologs #345. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 T.rubripes:460

Q5KML3              	100.00%		H2S8K0              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for H2S8K0 as seed ortholog is 100%.

Group of orthologs #346. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 T.rubripes:460

Q5KJI8              	100.00%		P70076              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for P70076 as seed ortholog is 100%.

Group of orthologs #347. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 T.rubripes:97

Q5KKE3              	100.00%		H2UX35              	100.00%
                    	       		H2TL80              	49.37%
                    	       		H2SEN5              	27.25%
                    	       		H2TVV2              	11.84%
                    	       		H2SG44              	10.80%
                    	       		H2SIN2              	8.70%
                    	       		H2TZU4              	5.77%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for H2UX35 as seed ortholog is 98%.

Group of orthologs #348. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 T.rubripes:377

Q5KLM1              	100.00%		H2SYJ1              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 100%.
Bootstrap support for H2SYJ1 as seed ortholog is 100%.

Group of orthologs #349. Best score 457 bits
Score difference with first non-orthologous sequence - C.neoformans:457 T.rubripes:457

Q5KHN9              	100.00%		H2VAF5              	100.00%
Bootstrap support for Q5KHN9 as seed ortholog is 100%.
Bootstrap support for H2VAF5 as seed ortholog is 100%.

Group of orthologs #350. Best score 455 bits
Score difference with first non-orthologous sequence - C.neoformans:455 T.rubripes:455

Q5KF32              	100.00%		H2RTJ2              	100.00%
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for H2RTJ2 as seed ortholog is 100%.

Group of orthologs #351. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 T.rubripes:347

Q5KFB7              	100.00%		H2TI73              	100.00%
                    	       		H2RQD0              	26.13%
                    	       		H2UFV2              	24.42%
Bootstrap support for Q5KFB7 as seed ortholog is 100%.
Bootstrap support for H2TI73 as seed ortholog is 100%.

Group of orthologs #352. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubripes:129

Q5KMG1              	100.00%		H2T6Q7              	100.00%
Q5K8R8              	17.02%		
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for H2T6Q7 as seed ortholog is 99%.

Group of orthologs #353. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubripes:451

P0CS70              	100.00%		H2UWQ7              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for H2UWQ7 as seed ortholog is 100%.

Group of orthologs #354. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubripes:451

Q5KH62              	100.00%		H2ULH9              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for H2ULH9 as seed ortholog is 100%.

Group of orthologs #355. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubripes:298

Q5KKM6              	100.00%		H2V1C2              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for H2V1C2 as seed ortholog is 100%.

Group of orthologs #356. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:450 T.rubripes:450

Q5KKK6              	100.00%		H2RPH1              	100.00%
                    	       		H2V8G9              	66.85%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for H2RPH1 as seed ortholog is 100%.

Group of orthologs #357. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:450 T.rubripes:245

Q5KMF5              	100.00%		H2RMP4              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for H2RMP4 as seed ortholog is 100%.

Group of orthologs #358. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:380 T.rubripes:339

P0CS48              	100.00%		H2ST21              	100.00%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for H2ST21 as seed ortholog is 100%.

Group of orthologs #359. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubripes:172

Q5K707              	100.00%		H2TQ03              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 100%.
Bootstrap support for H2TQ03 as seed ortholog is 99%.

Group of orthologs #360. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:388 T.rubripes:346

P0CQ14              	100.00%		H2S9R4              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for H2S9R4 as seed ortholog is 100%.

Group of orthologs #361. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:447 T.rubripes:228

Q5KE89              	100.00%		H2U1Z5              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 100%.
Bootstrap support for H2U1Z5 as seed ortholog is 99%.

Group of orthologs #362. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubripes:194

Q5KEJ1              	100.00%		H2TZZ5              	100.00%
                    	       		H2S9D0              	69.16%
Bootstrap support for Q5KEJ1 as seed ortholog is 100%.
Bootstrap support for H2TZZ5 as seed ortholog is 99%.

Group of orthologs #363. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:286 T.rubripes:446

Q5KK83              	100.00%		H2TKJ2              	100.00%
Bootstrap support for Q5KK83 as seed ortholog is 100%.
Bootstrap support for H2TKJ2 as seed ortholog is 100%.

Group of orthologs #364. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 T.rubripes:446

Q5KJ46              	100.00%		H2VEZ4              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for H2VEZ4 as seed ortholog is 100%.

Group of orthologs #365. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubripes:445

Q5KJH8              	100.00%		H2SX20              	100.00%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for H2SX20 as seed ortholog is 100%.

Group of orthologs #366. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:296 T.rubripes:331

Q5KDD7              	100.00%		H2VCB6              	100.00%
Bootstrap support for Q5KDD7 as seed ortholog is 100%.
Bootstrap support for H2VCB6 as seed ortholog is 100%.

Group of orthologs #367. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:445 T.rubripes:445

Q5KPL5              	100.00%		H2UYE1              	100.00%
Bootstrap support for Q5KPL5 as seed ortholog is 100%.
Bootstrap support for H2UYE1 as seed ortholog is 100%.

Group of orthologs #368. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubripes:193

Q5KMR6              	100.00%		H2UGS9              	100.00%
                    	       		H2SXT7              	47.80%
                    	       		H2UJN7              	47.20%
Bootstrap support for Q5KMR6 as seed ortholog is 100%.
Bootstrap support for H2UGS9 as seed ortholog is 99%.

Group of orthologs #369. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:360 T.rubripes:444

Q5KDJ3              	100.00%		H2TEF5              	100.00%
                    	       		H2RQA0              	54.95%
Bootstrap support for Q5KDJ3 as seed ortholog is 100%.
Bootstrap support for H2TEF5 as seed ortholog is 100%.

Group of orthologs #370. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubripes:301

Q5KQ06              	100.00%		H2S507              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for H2S507 as seed ortholog is 100%.

Group of orthologs #371. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubripes:165

Q5KH19              	100.00%		H2UI13              	100.00%
Bootstrap support for Q5KH19 as seed ortholog is 100%.
Bootstrap support for H2UI13 as seed ortholog is 99%.

Group of orthologs #372. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:441

Q5K8E2              	100.00%		H2UWI7              	100.00%
Bootstrap support for Q5K8E2 as seed ortholog is 83%.
Bootstrap support for H2UWI7 as seed ortholog is 100%.

Group of orthologs #373. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 T.rubripes:441

Q5KHA6              	100.00%		H2UC76              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for H2UC76 as seed ortholog is 100%.

Group of orthologs #374. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 T.rubripes:197

Q5KHB5              	100.00%		H2RTW7              	100.00%
                    	       		H2S6R9              	35.73%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for H2RTW7 as seed ortholog is 100%.

Group of orthologs #375. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubripes:211

P0CQ92              	100.00%		H2RXD2              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for H2RXD2 as seed ortholog is 100%.

Group of orthologs #376. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:176

P0CO88              	100.00%		H2TRT3              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 100%.
Bootstrap support for H2TRT3 as seed ortholog is 100%.

Group of orthologs #377. Best score 439 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubripes:276

P0CS42              	100.00%		H2TV93              	100.00%
Bootstrap support for P0CS42 as seed ortholog is 100%.
Bootstrap support for H2TV93 as seed ortholog is 100%.

Group of orthologs #378. Best score 439 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:217

Q5K8L9              	100.00%		H2UHU6              	100.00%
Bootstrap support for Q5K8L9 as seed ortholog is 66%.
Alternative seed ortholog is P0CQ66 (87 bits away from this cluster)
Bootstrap support for H2UHU6 as seed ortholog is 99%.

Group of orthologs #379. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubripes:438

Q5KER6              	100.00%		H2SAR2              	100.00%
                    	       		H2TRX6              	43.21%
Bootstrap support for Q5KER6 as seed ortholog is 100%.
Bootstrap support for H2SAR2 as seed ortholog is 100%.

Group of orthologs #380. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 T.rubripes:313

Q5KF83              	100.00%		H2TP07              	100.00%
                    	       		H2V7E1              	35.86%
Bootstrap support for Q5KF83 as seed ortholog is 100%.
Bootstrap support for H2TP07 as seed ortholog is 100%.

Group of orthologs #381. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 T.rubripes:436

Q5KED7              	100.00%		H2RXV0              	100.00%
                    	       		H2UFF2              	25.46%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for H2RXV0 as seed ortholog is 100%.

Group of orthologs #382. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:102

Q5KDB7              	100.00%		H2TJA9              	100.00%
                    	       		H2TIT4              	5.76%
Bootstrap support for Q5KDB7 as seed ortholog is 99%.
Bootstrap support for H2TJA9 as seed ortholog is 93%.

Group of orthologs #383. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 T.rubripes:436

Q5K8I1              	100.00%		H2RZ13              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for H2RZ13 as seed ortholog is 100%.

Group of orthologs #384. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubripes:435

Q5KMA4              	100.00%		H2UGC0              	100.00%
Bootstrap support for Q5KMA4 as seed ortholog is 100%.
Bootstrap support for H2UGC0 as seed ortholog is 100%.

Group of orthologs #385. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 T.rubripes:433

Q5KDX5              	100.00%		H2TJS8              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for H2TJS8 as seed ortholog is 100%.

Group of orthologs #386. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 T.rubripes:433

P0CN28              	100.00%		H2U860              	100.00%
Bootstrap support for P0CN28 as seed ortholog is 100%.
Bootstrap support for H2U860 as seed ortholog is 100%.

Group of orthologs #387. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:368 T.rubripes:349

Q5KJN4              	100.00%		H2SXT3              	100.00%
Bootstrap support for Q5KJN4 as seed ortholog is 100%.
Bootstrap support for H2SXT3 as seed ortholog is 100%.

Group of orthologs #388. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:348 T.rubripes:266

Q5KG30              	100.00%		H2UZ27              	100.00%
                    	       		H2UXG4              	36.59%
                    	       		H2T9E1              	27.36%
                    	       		H2UBJ7              	13.68%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for H2UZ27 as seed ortholog is 100%.

Group of orthologs #389. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 T.rubripes:431

Q5KMS5              	100.00%		H2TUS8              	100.00%
Bootstrap support for Q5KMS5 as seed ortholog is 100%.
Bootstrap support for H2TUS8 as seed ortholog is 100%.

Group of orthologs #390. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 T.rubripes:431

P0CN42              	100.00%		H2V8Z7              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for H2V8Z7 as seed ortholog is 100%.

Group of orthologs #391. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubripes:141

Q5KBZ0              	100.00%		H2TXN8              	100.00%
Q5KIV9              	14.54%		
Bootstrap support for Q5KBZ0 as seed ortholog is 99%.
Bootstrap support for H2TXN8 as seed ortholog is 99%.

Group of orthologs #392. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubripes:311

Q5KEQ4              	100.00%		H2UY55              	100.00%
                    	       		H2VDB6              	50.72%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for H2UY55 as seed ortholog is 100%.

Group of orthologs #393. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 T.rubripes:429

Q5KAB5              	100.00%		H2VD90              	100.00%
                    	       		H2U1Y8              	15.65%
Bootstrap support for Q5KAB5 as seed ortholog is 100%.
Bootstrap support for H2VD90 as seed ortholog is 100%.

Group of orthologs #394. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 T.rubripes:429

Q5KA00              	100.00%		H2SDJ0              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for H2SDJ0 as seed ortholog is 100%.

Group of orthologs #395. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubripes:428

Q5K9L0              	100.00%		H2SQ01              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for H2SQ01 as seed ortholog is 100%.

Group of orthologs #396. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubripes:428

Q5KMM8              	100.00%		H2S1E7              	100.00%
Bootstrap support for Q5KMM8 as seed ortholog is 100%.
Bootstrap support for H2S1E7 as seed ortholog is 100%.

Group of orthologs #397. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubripes:428

Q5KAB8              	100.00%		H2TQ63              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for H2TQ63 as seed ortholog is 100%.

Group of orthologs #398. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubripes:428

Q5KHJ8              	100.00%		H2U1E7              	100.00%
Bootstrap support for Q5KHJ8 as seed ortholog is 100%.
Bootstrap support for H2U1E7 as seed ortholog is 100%.

Group of orthologs #399. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:11 T.rubripes:112

Q5KFY6              	100.00%		H2V1B2              	100.00%
                    	       		H2UIJ7              	44.26%
Bootstrap support for Q5KFY6 as seed ortholog is 55%.
Alternative seed ortholog is Q5KHP3 (11 bits away from this cluster)
Bootstrap support for H2V1B2 as seed ortholog is 99%.

Group of orthologs #400. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 T.rubripes:426

P0CO20              	100.00%		H2SLH0              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for H2SLH0 as seed ortholog is 100%.

Group of orthologs #401. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:287

Q5KHS2              	100.00%		H2UHY7              	100.00%
Bootstrap support for Q5KHS2 as seed ortholog is 99%.
Bootstrap support for H2UHY7 as seed ortholog is 100%.

Group of orthologs #402. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 T.rubripes:425

Q5K9N8              	100.00%		H2TCS8              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for H2TCS8 as seed ortholog is 100%.

Group of orthologs #403. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 T.rubripes:425

Q5KIS9              	100.00%		H2V2A6              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for H2V2A6 as seed ortholog is 100%.

Group of orthologs #404. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 T.rubripes:424

Q5KP39              	100.00%		H2ULM8              	100.00%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for H2ULM8 as seed ortholog is 100%.

Group of orthologs #405. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubripes:68

Q5KDK0              	100.00%		H2SHZ9              	100.00%
                    	       		H2SI59              	41.70%
                    	       		H2TKJ6              	21.40%
Bootstrap support for Q5KDK0 as seed ortholog is 100%.
Bootstrap support for H2SHZ9 as seed ortholog is 90%.

Group of orthologs #406. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 T.rubripes:422

Q5KAU7              	100.00%		H2TG51              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for H2TG51 as seed ortholog is 100%.

Group of orthologs #407. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubripes:254

P0CR10              	100.00%		H2VER2              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 100%.
Bootstrap support for H2VER2 as seed ortholog is 100%.

Group of orthologs #408. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 T.rubripes:420

Q5KGA8              	100.00%		H2SAB7              	100.00%
Bootstrap support for Q5KGA8 as seed ortholog is 100%.
Bootstrap support for H2SAB7 as seed ortholog is 100%.

Group of orthologs #409. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 T.rubripes:420

Q5K7Q1              	100.00%		H2TIK3              	100.00%
Bootstrap support for Q5K7Q1 as seed ortholog is 100%.
Bootstrap support for H2TIK3 as seed ortholog is 100%.

Group of orthologs #410. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 T.rubripes:420

Q5KKG9              	100.00%		H2SWN9              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for H2SWN9 as seed ortholog is 100%.

Group of orthologs #411. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:247

P0CR06              	100.00%		H2UMM1              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 99%.
Bootstrap support for H2UMM1 as seed ortholog is 100%.

Group of orthologs #412. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:419 T.rubripes:419

P0CN56              	100.00%		H2V812              	100.00%
Bootstrap support for P0CN56 as seed ortholog is 100%.
Bootstrap support for H2V812 as seed ortholog is 100%.

Group of orthologs #413. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 T.rubripes:418

Q5KGV7              	100.00%		H2SF96              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for H2SF96 as seed ortholog is 100%.

Group of orthologs #414. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 T.rubripes:418

Q5KJ97              	100.00%		H2TYJ5              	100.00%
Bootstrap support for Q5KJ97 as seed ortholog is 100%.
Bootstrap support for H2TYJ5 as seed ortholog is 100%.

Group of orthologs #415. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubripes:417

Q5KH75              	100.00%		H2RUI6              	100.00%
                    	       		H2UH43              	36.20%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for H2RUI6 as seed ortholog is 100%.

Group of orthologs #416. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubripes:417

Q5KDR1              	100.00%		H2T2I8              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for H2T2I8 as seed ortholog is 100%.

Group of orthologs #417. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubripes:417

Q5KJY4              	100.00%		H2V7G4              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for H2V7G4 as seed ortholog is 100%.

Group of orthologs #418. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubripes:416

Q5KAH4              	100.00%		H2UFH6              	100.00%
                    	       		H2UG23              	43.53%
                    	       		H2UFG4              	9.11%
Bootstrap support for Q5KAH4 as seed ortholog is 100%.
Bootstrap support for H2UFH6 as seed ortholog is 100%.

Group of orthologs #419. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubripes:416

Q5KDT3              	100.00%		H2UN41              	100.00%
                    	       		H2V2J3              	59.18%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for H2UN41 as seed ortholog is 100%.

Group of orthologs #420. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubripes:416

P0CN44              	100.00%		H2TTB7              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for H2TTB7 as seed ortholog is 100%.

Group of orthologs #421. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 T.rubripes:135

Q5K721              	100.00%		H2TBN1              	100.00%
                    	       		H2RUP1              	37.76%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for H2TBN1 as seed ortholog is 98%.

Group of orthologs #422. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:301 T.rubripes:201

Q5KLS2              	100.00%		H2UGU7              	100.00%
                    	       		H2T7E2              	35.65%
Bootstrap support for Q5KLS2 as seed ortholog is 100%.
Bootstrap support for H2UGU7 as seed ortholog is 100%.

Group of orthologs #423. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 T.rubripes:344

P0CS60              	100.00%		H2U529              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for H2U529 as seed ortholog is 100%.

Group of orthologs #424. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:117

Q5KCX1              	100.00%		H2U547              	100.00%
Bootstrap support for Q5KCX1 as seed ortholog is 99%.
Bootstrap support for H2U547 as seed ortholog is 98%.

Group of orthologs #425. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 T.rubripes:413

Q5KGZ3              	100.00%		H2TN05              	100.00%
Q5KIR4              	100.00%		
Bootstrap support for Q5KGZ3 as seed ortholog is 100%.
Bootstrap support for Q5KIR4 as seed ortholog is 100%.
Bootstrap support for H2TN05 as seed ortholog is 100%.

Group of orthologs #426. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 T.rubripes:413

P0CR56              	100.00%		H2VAB6              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for H2VAB6 as seed ortholog is 100%.

Group of orthologs #427. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 T.rubripes:412

Q5KK29              	100.00%		H2RYB1              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for H2RYB1 as seed ortholog is 100%.

Group of orthologs #428. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 T.rubripes:207

Q5KIY3              	100.00%		H2T154              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for H2T154 as seed ortholog is 99%.

Group of orthologs #429. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:411 T.rubripes:411

P0CO78              	100.00%		H2U296              	100.00%
                    	       		H2UR24              	43.96%
Bootstrap support for P0CO78 as seed ortholog is 100%.
Bootstrap support for H2U296 as seed ortholog is 100%.

Group of orthologs #430. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:116

Q5KLZ4              	100.00%		H2U127              	100.00%
                    	       		H2UNW9              	52.82%
Bootstrap support for Q5KLZ4 as seed ortholog is 100%.
Bootstrap support for H2U127 as seed ortholog is 99%.

Group of orthologs #431. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:410

Q5KP10              	100.00%		H2U4N3              	100.00%
Bootstrap support for Q5KP10 as seed ortholog is 100%.
Bootstrap support for H2U4N3 as seed ortholog is 100%.

Group of orthologs #432. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:409 T.rubripes:409

P0CN48              	100.00%		H2T4N9              	100.00%
Bootstrap support for P0CN48 as seed ortholog is 100%.
Bootstrap support for H2T4N9 as seed ortholog is 100%.

Group of orthologs #433. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:409 T.rubripes:137

Q5K8W1              	100.00%		H2TTD8              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for H2TTD8 as seed ortholog is 96%.

Group of orthologs #434. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:409 T.rubripes:129

Q5KNW6              	100.00%		H2UYK5              	100.00%
Bootstrap support for Q5KNW6 as seed ortholog is 100%.
Bootstrap support for H2UYK5 as seed ortholog is 99%.

Group of orthologs #435. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:131

Q5KDT4              	100.00%		H2RLE9              	100.00%
                    	       		H2V5T3              	42.54%
                    	       		H2SU63              	33.33%
Bootstrap support for Q5KDT4 as seed ortholog is 100%.
Bootstrap support for H2RLE9 as seed ortholog is 100%.

Group of orthologs #436. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 T.rubripes:93

Q5KJV0              	100.00%		H2S0Z3              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 100%.
Bootstrap support for H2S0Z3 as seed ortholog is 99%.

Group of orthologs #437. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 T.rubripes:408

Q5KH01              	100.00%		H2UNN0              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for H2UNN0 as seed ortholog is 100%.

Group of orthologs #438. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 T.rubripes:406

Q5KDV3              	100.00%		H2TS58              	100.00%
Q5KJX0              	74.28%		
Bootstrap support for Q5KDV3 as seed ortholog is 100%.
Bootstrap support for H2TS58 as seed ortholog is 100%.

Group of orthologs #439. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:308 T.rubripes:202

Q5KJQ2              	100.00%		H2T844              	100.00%
Bootstrap support for Q5KJQ2 as seed ortholog is 100%.
Bootstrap support for H2T844 as seed ortholog is 100%.

Group of orthologs #440. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 T.rubripes:241

Q5KKS5              	100.00%		H2U2Y1              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for H2U2Y1 as seed ortholog is 100%.

Group of orthologs #441. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:404

Q5KB65              	100.00%		H2TK75              	100.00%
                    	       		H2TRY4              	40.06%
                    	       		H2TTS8              	32.42%
                    	       		H2TPN6              	31.35%
Bootstrap support for Q5KB65 as seed ortholog is 99%.
Bootstrap support for H2TK75 as seed ortholog is 100%.

Group of orthologs #442. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubripes:253

P0CS38              	100.00%		O42611              	100.00%
Bootstrap support for P0CS38 as seed ortholog is 100%.
Bootstrap support for O42611 as seed ortholog is 100%.

Group of orthologs #443. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubripes:404

Q5KLM5              	100.00%		H2UW97              	100.00%
Bootstrap support for Q5KLM5 as seed ortholog is 100%.
Bootstrap support for H2UW97 as seed ortholog is 100%.

Group of orthologs #444. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubripes:299

Q5KB45              	100.00%		H2T3P0              	100.00%
                    	       		H2S8E4              	46.25%
                    	       		H2UY67              	20.01%
                    	       		H2SW94              	19.18%
                    	       		H2TJQ4              	18.85%
Bootstrap support for Q5KB45 as seed ortholog is 100%.
Bootstrap support for H2T3P0 as seed ortholog is 99%.

Group of orthologs #445. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:153

Q5KDX8              	100.00%		H2TMA8              	100.00%
                    	       		H2UFJ0              	76.76%
Bootstrap support for Q5KDX8 as seed ortholog is 97%.
Bootstrap support for H2TMA8 as seed ortholog is 100%.

Group of orthologs #446. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubripes:403

P0CR70              	100.00%		H2RZ97              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for H2RZ97 as seed ortholog is 100%.

Group of orthologs #447. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubripes:291

Q5KBU1              	100.00%		H2RNT4              	100.00%
Bootstrap support for Q5KBU1 as seed ortholog is 100%.
Bootstrap support for H2RNT4 as seed ortholog is 100%.

Group of orthologs #448. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubripes:403

Q5KPN7              	100.00%		H2V408              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for H2V408 as seed ortholog is 100%.

Group of orthologs #449. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 T.rubripes:183

Q5KCX8              	100.00%		H2SSU6              	100.00%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for H2SSU6 as seed ortholog is 99%.

Group of orthologs #450. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 T.rubripes:402

Q5KAF2              	100.00%		H2UKK3              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for H2UKK3 as seed ortholog is 100%.

Group of orthologs #451. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 T.rubripes:400

P0CM24              	100.00%		H2SVT9              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for H2SVT9 as seed ortholog is 100%.

Group of orthologs #452. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 T.rubripes:399

P0CN18              	100.00%		H2SBJ0              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 100%.
Bootstrap support for H2SBJ0 as seed ortholog is 100%.

Group of orthologs #453. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubripes:10

Q5KKV1              	100.00%		H2VDI9              	100.00%
Bootstrap support for Q5KKV1 as seed ortholog is 100%.
Bootstrap support for H2VDI9 as seed ortholog is 64%.
Alternative seed ortholog is H2S418 (10 bits away from this cluster)

Group of orthologs #454. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:66

Q5KFU8              	100.00%		H2TB63              	100.00%
Bootstrap support for Q5KFU8 as seed ortholog is 99%.
Bootstrap support for H2TB63 as seed ortholog is 96%.

Group of orthologs #455. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubripes:398

Q5KB64              	100.00%		H2UBV3              	100.00%
Bootstrap support for Q5KB64 as seed ortholog is 100%.
Bootstrap support for H2UBV3 as seed ortholog is 100%.

Group of orthologs #456. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubripes:267

Q5KL44              	100.00%		H2V5A1              	100.00%
Bootstrap support for Q5KL44 as seed ortholog is 100%.
Bootstrap support for H2V5A1 as seed ortholog is 99%.

Group of orthologs #457. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:397 T.rubripes:397

Q5KK64              	100.00%		H2SSV2              	100.00%
Bootstrap support for Q5KK64 as seed ortholog is 100%.
Bootstrap support for H2SSV2 as seed ortholog is 100%.

Group of orthologs #458. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 T.rubripes:396

P0CR16              	100.00%		H2UVM3              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 100%.
Bootstrap support for H2UVM3 as seed ortholog is 100%.

Group of orthologs #459. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubripes:95

Q5KIM3              	100.00%		H2V386              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for H2V386 as seed ortholog is 94%.

Group of orthologs #460. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:395 T.rubripes:395

Q5KM38              	100.00%		H2TIF3              	100.00%
Bootstrap support for Q5KM38 as seed ortholog is 100%.
Bootstrap support for H2TIF3 as seed ortholog is 100%.

Group of orthologs #461. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 T.rubripes:394

P0CN46              	100.00%		H2TCV9              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for H2TCV9 as seed ortholog is 100%.

Group of orthologs #462. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 T.rubripes:394

Q5KP99              	100.00%		H2TPX9              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for H2TPX9 as seed ortholog is 100%.

Group of orthologs #463. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 T.rubripes:393

Q5K7P2              	100.00%		H2UFR9              	100.00%
Bootstrap support for Q5K7P2 as seed ortholog is 100%.
Bootstrap support for H2UFR9 as seed ortholog is 100%.

Group of orthologs #464. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 T.rubripes:393

Q5KA97              	100.00%		H2U821              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for H2U821 as seed ortholog is 100%.

Group of orthologs #465. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 T.rubripes:28

Q5KID8              	100.00%		H2U1C6              	100.00%
Bootstrap support for Q5KID8 as seed ortholog is 100%.
Bootstrap support for H2U1C6 as seed ortholog is 62%.
Alternative seed ortholog is H2SUL6 (28 bits away from this cluster)

Group of orthologs #466. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 T.rubripes:392

Q5KE15              	100.00%		H2RN09              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for H2RN09 as seed ortholog is 100%.

Group of orthologs #467. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 T.rubripes:392

Q5KH85              	100.00%		H2SI07              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for H2SI07 as seed ortholog is 100%.

Group of orthologs #468. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:209

Q5KLR7              	100.00%		H2TGG7              	100.00%
                    	       		H2U3P8              	8.03%
Bootstrap support for Q5KLR7 as seed ortholog is 99%.
Bootstrap support for H2TGG7 as seed ortholog is 99%.

Group of orthologs #469. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 T.rubripes:391

Q5K7Q2              	100.00%		H2S9L2              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for H2S9L2 as seed ortholog is 100%.

Group of orthologs #470. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 T.rubripes:2

Q5KN95              	100.00%		H2UGA6              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for H2UGA6 as seed ortholog is 60%.
Alternative seed ortholog is H2SRU0 (2 bits away from this cluster)

Group of orthologs #471. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:310 T.rubripes:242

Q5KKX9              	100.00%		H2V5N3              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 99%.
Bootstrap support for H2V5N3 as seed ortholog is 100%.

Group of orthologs #472. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 T.rubripes:390

Q5KGR5              	100.00%		H2TI85              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 100%.
Bootstrap support for H2TI85 as seed ortholog is 100%.

Group of orthologs #473. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 T.rubripes:389

Q5KCC8              	100.00%		H2V9C5              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for H2V9C5 as seed ortholog is 100%.

Group of orthologs #474. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 T.rubripes:388

Q5K7X0              	100.00%		H2T6L2              	100.00%
                    	       		H2V7Q1              	33.81%
Bootstrap support for Q5K7X0 as seed ortholog is 100%.
Bootstrap support for H2T6L2 as seed ortholog is 100%.

Group of orthologs #475. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 T.rubripes:388

Q5KJN5              	100.00%		H2V049              	100.00%
                    	       		H2TQI4              	32.56%
Bootstrap support for Q5KJN5 as seed ortholog is 100%.
Bootstrap support for H2V049 as seed ortholog is 100%.

Group of orthologs #476. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:340 T.rubripes:386

P0CO58              	100.00%		H2TFV5              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for H2TFV5 as seed ortholog is 100%.

Group of orthologs #477. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:317

Q5KLS1              	100.00%		H2TTI1              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for H2TTI1 as seed ortholog is 100%.

Group of orthologs #478. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:385 T.rubripes:385

Q5KGD3              	100.00%		H2RYR7              	100.00%
                    	       		H2S7S6              	43.40%
                    	       		H2TGA2              	35.98%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for H2RYR7 as seed ortholog is 100%.

Group of orthologs #479. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:385 T.rubripes:385

Q5KE08              	100.00%		H2S8D8              	100.00%
                    	       		H2TYY3              	58.03%
Bootstrap support for Q5KE08 as seed ortholog is 100%.
Bootstrap support for H2S8D8 as seed ortholog is 100%.

Group of orthologs #480. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:385 T.rubripes:385

Q5KLR9              	100.00%		H2UNV2              	100.00%
Bootstrap support for Q5KLR9 as seed ortholog is 100%.
Bootstrap support for H2UNV2 as seed ortholog is 100%.

Group of orthologs #481. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:342 T.rubripes:384

Q5K7N0              	100.00%		H2UQV9              	100.00%
Bootstrap support for Q5K7N0 as seed ortholog is 100%.
Bootstrap support for H2UQV9 as seed ortholog is 100%.

Group of orthologs #482. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 T.rubripes:383

Q5KLQ5              	100.00%		H2RJE4              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for H2RJE4 as seed ortholog is 100%.

Group of orthologs #483. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubripes:382

Q5KE74              	100.00%		H2RQ08              	100.00%
                    	       		H2TVB7              	46.09%
                    	       		H2TTT3              	9.53%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for H2RQ08 as seed ortholog is 100%.

Group of orthologs #484. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:135

Q5KHE5              	100.00%		H2UQ68              	100.00%
P0CP66              	25.41%		H2SN22              	63.90%
Bootstrap support for Q5KHE5 as seed ortholog is 95%.
Bootstrap support for H2UQ68 as seed ortholog is 99%.

Group of orthologs #485. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 T.rubripes:106

Q5K7N5              	100.00%		H2SXJ9              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for H2SXJ9 as seed ortholog is 97%.

Group of orthologs #486. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 T.rubripes:382

P0CR72              	100.00%		H2UIP1              	100.00%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for H2UIP1 as seed ortholog is 100%.

Group of orthologs #487. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubripes:205

P0CQ90              	100.00%		H2SQZ0              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for H2SQZ0 as seed ortholog is 99%.

Group of orthologs #488. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 T.rubripes:12

P0CP02              	100.00%		H2V026              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for H2V026 as seed ortholog is 62%.
Alternative seed ortholog is H2SA34 (12 bits away from this cluster)

Group of orthologs #489. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 T.rubripes:380

Q5KBB6              	100.00%		H2UE86              	100.00%
Bootstrap support for Q5KBB6 as seed ortholog is 100%.
Bootstrap support for H2UE86 as seed ortholog is 100%.

Group of orthologs #490. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubripes:94

Q5KBD0              	100.00%		H2UFT4              	100.00%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for H2UFT4 as seed ortholog is 96%.

Group of orthologs #491. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubripes:378

P0CP20              	100.00%		H2UZJ8              	100.00%
                    	       		Q804Z3              	54.29%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for H2UZJ8 as seed ortholog is 100%.

Group of orthologs #492. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubripes:378

Q5K8K4              	100.00%		H2RZU0              	100.00%
Bootstrap support for Q5K8K4 as seed ortholog is 100%.
Bootstrap support for H2RZU0 as seed ortholog is 100%.

Group of orthologs #493. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubripes:378

P0CN08              	100.00%		H2TKB5              	100.00%
Bootstrap support for P0CN08 as seed ortholog is 100%.
Bootstrap support for H2TKB5 as seed ortholog is 100%.

Group of orthologs #494. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 T.rubripes:377

Q5KHZ2              	100.00%		H2SCP0              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for H2SCP0 as seed ortholog is 100%.

Group of orthologs #495. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 T.rubripes:377

Q5KNK2              	100.00%		H2T6H0              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for H2T6H0 as seed ortholog is 100%.

Group of orthologs #496. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 T.rubripes:377

Q5KIN5              	100.00%		H2TTP4              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for H2TTP4 as seed ortholog is 100%.

Group of orthologs #497. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 T.rubripes:285

Q5KMH4              	100.00%		H2TUZ6              	100.00%
                    	       		H2RQM0              	36.93%
Bootstrap support for Q5KMH4 as seed ortholog is 100%.
Bootstrap support for H2TUZ6 as seed ortholog is 100%.

Group of orthologs #498. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubripes:376

Q5K7L9              	100.00%		H2RXN8              	100.00%
Bootstrap support for Q5K7L9 as seed ortholog is 99%.
Bootstrap support for H2RXN8 as seed ortholog is 100%.

Group of orthologs #499. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 T.rubripes:376

P0CP50              	100.00%		H2SNS4              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for H2SNS4 as seed ortholog is 100%.

Group of orthologs #500. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 T.rubripes:376

Q5KFR0              	100.00%		H2U6C2              	100.00%
Bootstrap support for Q5KFR0 as seed ortholog is 100%.
Bootstrap support for H2U6C2 as seed ortholog is 100%.

Group of orthologs #501. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:335 T.rubripes:316

Q5KKZ9              	100.00%		H2TV64              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for H2TV64 as seed ortholog is 100%.

Group of orthologs #502. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 T.rubripes:375

P0CP90              	100.00%		H2UPH0              	100.00%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for H2UPH0 as seed ortholog is 100%.

Group of orthologs #503. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubripes:373

Q5KLS5              	100.00%		H2TKT5              	100.00%
                    	       		H2U0G1              	49.67%
                    	       		H2U638              	13.22%
                    	       		H2ULL2              	12.31%
                    	       		H2RP85              	9.09%
                    	       		H2S1G1              	8.26%
Bootstrap support for Q5KLS5 as seed ortholog is 100%.
Bootstrap support for H2TKT5 as seed ortholog is 100%.

Group of orthologs #504. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:33

Q5KNT3              	100.00%		H2UZS7              	100.00%
                    	       		H2SHC0              	46.47%
Bootstrap support for Q5KNT3 as seed ortholog is 99%.
Bootstrap support for H2UZS7 as seed ortholog is 76%.

Group of orthologs #505. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubripes:373

Q5KIH5              	100.00%		H2RKN1              	100.00%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for H2RKN1 as seed ortholog is 100%.

Group of orthologs #506. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubripes:373

Q5KAS4              	100.00%		H2TAZ5              	100.00%
Bootstrap support for Q5KAS4 as seed ortholog is 100%.
Bootstrap support for H2TAZ5 as seed ortholog is 100%.

Group of orthologs #507. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubripes:373

P0CQ60              	100.00%		H2VDW9              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for H2VDW9 as seed ortholog is 100%.

Group of orthologs #508. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 T.rubripes:372

P0CP22              	100.00%		H2S2D9              	100.00%
                    	       		H2SD15              	62.27%
Bootstrap support for P0CP22 as seed ortholog is 100%.
Bootstrap support for H2S2D9 as seed ortholog is 100%.

Group of orthologs #509. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 T.rubripes:127

Q5KGZ9              	100.00%		H2RLJ6              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for H2RLJ6 as seed ortholog is 98%.

Group of orthologs #510. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubripes:371

P0CR86              	100.00%		H2UU85              	100.00%
                    	       		H2TWG8              	37.15%
                    	       		H2UXR0              	17.83%
Bootstrap support for P0CR86 as seed ortholog is 100%.
Bootstrap support for H2UU85 as seed ortholog is 100%.

Group of orthologs #511. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:215

P0CQ86              	100.00%		H2TGK7              	100.00%
                    	       		H2SQ24              	44.24%
Bootstrap support for P0CQ86 as seed ortholog is 100%.
Bootstrap support for H2TGK7 as seed ortholog is 100%.

Group of orthologs #512. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubripes:371

Q5KIJ9              	100.00%		H2RLD8              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for H2RLD8 as seed ortholog is 100%.

Group of orthologs #513. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubripes:63

Q5K8Z6              	100.00%		H2TZG6              	100.00%
                    	       		H2TUP1              	29.69%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for H2TZG6 as seed ortholog is 99%.

Group of orthologs #514. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:236

Q5KJI7              	100.00%		H2UTI0              	100.00%
                    	       		H2VC44              	49.69%
Bootstrap support for Q5KJI7 as seed ortholog is 99%.
Bootstrap support for H2UTI0 as seed ortholog is 99%.

Group of orthologs #515. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubripes:370

Q5KPQ4              	100.00%		H2SVY1              	100.00%
Bootstrap support for Q5KPQ4 as seed ortholog is 100%.
Bootstrap support for H2SVY1 as seed ortholog is 100%.

Group of orthologs #516. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubripes:370

Q5KQ95              	100.00%		Q90YI3              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 100%.
Bootstrap support for Q90YI3 as seed ortholog is 100%.

Group of orthologs #517. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:17 T.rubripes:30

Q5KP84              	100.00%		H2SMS4              	100.00%
                    	       		H2TPZ3              	85.71%
                    	       		H2U5K6              	82.00%
                    	       		H2SRS1              	80.86%
Bootstrap support for Q5KP84 as seed ortholog is 68%.
Alternative seed ortholog is Q5KBC8 (17 bits away from this cluster)
Bootstrap support for H2SMS4 as seed ortholog is 85%.

Group of orthologs #518. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubripes:369

Q5KCX4              	100.00%		H2TW02              	100.00%
                    	       		H2RNM4              	22.94%
Bootstrap support for Q5KCX4 as seed ortholog is 100%.
Bootstrap support for H2TW02 as seed ortholog is 100%.

Group of orthologs #519. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubripes:369

P0CO32              	100.00%		H2SLN9              	100.00%
Bootstrap support for P0CO32 as seed ortholog is 100%.
Bootstrap support for H2SLN9 as seed ortholog is 100%.

Group of orthologs #520. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubripes:369

Q5KES4              	100.00%		H2V299              	100.00%
Bootstrap support for Q5KES4 as seed ortholog is 100%.
Bootstrap support for H2V299 as seed ortholog is 100%.

Group of orthologs #521. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 T.rubripes:368

Q5KKT0              	100.00%		H2TW71              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for H2TW71 as seed ortholog is 100%.

Group of orthologs #522. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 T.rubripes:297

Q5KPG7              	100.00%		H2TKY6              	100.00%
Bootstrap support for Q5KPG7 as seed ortholog is 100%.
Bootstrap support for H2TKY6 as seed ortholog is 100%.

Group of orthologs #523. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 T.rubripes:367

Q5K8Q9              	100.00%		H2S3I1              	100.00%
Q5KN82              	10.14%		
Bootstrap support for Q5K8Q9 as seed ortholog is 100%.
Bootstrap support for H2S3I1 as seed ortholog is 100%.

Group of orthologs #524. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 T.rubripes:367

Q5KNU1              	100.00%		H2STE8              	100.00%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for H2STE8 as seed ortholog is 100%.

Group of orthologs #525. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubripes:319

Q5KHR9              	100.00%		H2TC54              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 100%.
Bootstrap support for H2TC54 as seed ortholog is 100%.

Group of orthologs #526. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubripes:206

Q5KMP3              	100.00%		H2TKX2              	100.00%
                    	       		Q90512              	69.53%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for H2TKX2 as seed ortholog is 100%.

Group of orthologs #527. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 T.rubripes:366

Q5KAS7              	100.00%		H2RJB3              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for H2RJB3 as seed ortholog is 100%.

Group of orthologs #528. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:27 T.rubripes:365

Q5K758              	100.00%		H2U7U1              	100.00%
                    	       		H2RKV8              	30.13%
                    	       		H2U395              	24.40%
Bootstrap support for Q5K758 as seed ortholog is 74%.
Alternative seed ortholog is Q5KEY3 (27 bits away from this cluster)
Bootstrap support for H2U7U1 as seed ortholog is 100%.

Group of orthologs #529. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 T.rubripes:365

Q5KH76              	100.00%		H2V7V6              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for H2V7V6 as seed ortholog is 100%.

Group of orthologs #530. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 T.rubripes:364

Q5KHI3              	100.00%		H2UWS4              	100.00%
                    	       		Q802R9              	99.39%
Bootstrap support for Q5KHI3 as seed ortholog is 100%.
Bootstrap support for H2UWS4 as seed ortholog is 100%.

Group of orthologs #531. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 T.rubripes:364

Q5KMY7              	100.00%		H2S7Q7              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for H2S7Q7 as seed ortholog is 100%.

Group of orthologs #532. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 T.rubripes:364

Q5K8Z3              	100.00%		H2UFK7              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for H2UFK7 as seed ortholog is 100%.

Group of orthologs #533. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 T.rubripes:293

Q5KHT1              	100.00%		H2SQC1              	100.00%
                    	       		H2RUG2              	25.71%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for H2SQC1 as seed ortholog is 100%.

Group of orthologs #534. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 T.rubripes:265

Q5KJ20              	100.00%		H2TG53              	100.00%
                    	       		H2V316              	19.87%
Bootstrap support for Q5KJ20 as seed ortholog is 100%.
Bootstrap support for H2TG53 as seed ortholog is 100%.

Group of orthologs #535. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubripes:195

Q5K9B8              	100.00%		H2ULF6              	100.00%
                    	       		H2U9Q2              	8.89%
                    	       		H2RUE6              	6.64%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for H2ULF6 as seed ortholog is 100%.

Group of orthologs #536. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:362 T.rubripes:256

P0CP88              	100.00%		H2SVG0              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for H2SVG0 as seed ortholog is 100%.

Group of orthologs #537. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:362 T.rubripes:362

Q5KHS3              	100.00%		H2SYX1              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 100%.
Bootstrap support for H2SYX1 as seed ortholog is 100%.

Group of orthologs #538. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 T.rubripes:361

Q5KKQ4              	100.00%		H2SYI3              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for H2SYI3 as seed ortholog is 100%.

Group of orthologs #539. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubripes:359

Q5K7Y1              	100.00%		H2S7Z3              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 100%.
Bootstrap support for H2S7Z3 as seed ortholog is 100%.

Group of orthologs #540. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:293

Q5KDL9              	100.00%		H2SBI8              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 88%.
Bootstrap support for H2SBI8 as seed ortholog is 100%.

Group of orthologs #541. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubripes:359

Q5KIT6              	100.00%		H2SNJ2              	100.00%
Bootstrap support for Q5KIT6 as seed ortholog is 100%.
Bootstrap support for H2SNJ2 as seed ortholog is 100%.

Group of orthologs #542. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubripes:359

Q5KLF5              	100.00%		H2T0M0              	100.00%
Bootstrap support for Q5KLF5 as seed ortholog is 100%.
Bootstrap support for H2T0M0 as seed ortholog is 100%.

Group of orthologs #543. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubripes:259

Q5K7N9              	100.00%		H2V2Q5              	100.00%
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for H2V2Q5 as seed ortholog is 100%.

Group of orthologs #544. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 T.rubripes:358

Q5KGF8              	100.00%		H2U8Z5              	100.00%
Bootstrap support for Q5KGF8 as seed ortholog is 100%.
Bootstrap support for H2U8Z5 as seed ortholog is 100%.

Group of orthologs #545. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubripes:231

Q5KAT1              	100.00%		H2U5M0              	100.00%
Q5KAU3              	100.00%		H2T5Z9              	100.00%
                    	       		H2T0M9              	74.68%
                    	       		H2SQ95              	67.44%
Bootstrap support for Q5KAT1 as seed ortholog is 100%.
Bootstrap support for Q5KAU3 as seed ortholog is 100%.
Bootstrap support for H2U5M0 as seed ortholog is 99%.
Bootstrap support for H2T5Z9 as seed ortholog is 99%.

Group of orthologs #546. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubripes:357

Q5KFJ6              	100.00%		H2VCF4              	100.00%
                    	       		H2UDG3              	20.74%
Bootstrap support for Q5KFJ6 as seed ortholog is 100%.
Bootstrap support for H2VCF4 as seed ortholog is 100%.

Group of orthologs #547. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubripes:357

Q5KPZ5              	100.00%		H2SR27              	100.00%
Bootstrap support for Q5KPZ5 as seed ortholog is 100%.
Bootstrap support for H2SR27 as seed ortholog is 100%.

Group of orthologs #548. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubripes:357

P0CP58              	100.00%		H2UUQ4              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for H2UUQ4 as seed ortholog is 100%.

Group of orthologs #549. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 T.rubripes:355

Q5KPY7              	100.00%		O57656              	100.00%
                    	       		H2VCZ1              	67.62%
                    	       		H2TSN2              	50.14%
Bootstrap support for Q5KPY7 as seed ortholog is 100%.
Bootstrap support for O57656 as seed ortholog is 100%.

Group of orthologs #550. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 T.rubripes:257

Q5KDP4              	100.00%		H2TP62              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for H2TP62 as seed ortholog is 100%.

Group of orthologs #551. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 T.rubripes:231

Q5KQ20              	100.00%		H2TQN6              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for H2TQN6 as seed ortholog is 100%.

Group of orthologs #552. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubripes:355

Q5K952              	100.00%		H2V0B5              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for H2V0B5 as seed ortholog is 100%.

Group of orthologs #553. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 T.rubripes:354

Q5KFQ5              	100.00%		H2U4F4              	100.00%
                    	       		H2U3Q9              	47.06%
                    	       		H2TSW9              	34.12%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for H2U4F4 as seed ortholog is 100%.

Group of orthologs #554. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:6 T.rubripes:141

P0CR00              	100.00%		H2SFF2              	100.00%
Bootstrap support for P0CR00 as seed ortholog is 44%.
Alternative seed ortholog is P0CR02 (6 bits away from this cluster)
Bootstrap support for H2SFF2 as seed ortholog is 99%.

Group of orthologs #555. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 T.rubripes:354

Q5KFS1              	100.00%		H2SWD3              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 100%.
Bootstrap support for H2SWD3 as seed ortholog is 100%.

Group of orthologs #556. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 T.rubripes:353

Q5KCI3              	100.00%		H2UMM8              	100.00%
                    	       		H2RPJ0              	9.24%
                    	       		H2TY83              	8.36%
Bootstrap support for Q5KCI3 as seed ortholog is 100%.
Bootstrap support for H2UMM8 as seed ortholog is 100%.

Group of orthologs #557. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:268 T.rubripes:353

P0CS46              	100.00%		H2TJ30              	100.00%
Bootstrap support for P0CS46 as seed ortholog is 100%.
Bootstrap support for H2TJ30 as seed ortholog is 100%.

Group of orthologs #558. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:307

Q5KJ58              	100.00%		H2UB93              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for H2UB93 as seed ortholog is 100%.

Group of orthologs #559. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubripes:178

Q5KL60              	100.00%		H2T3W9              	100.00%
                    	       		H2SF85              	54.65%
                    	       		H2V765              	47.21%
                    	       		H2SDA4              	46.03%
Bootstrap support for Q5KL60 as seed ortholog is 100%.
Bootstrap support for H2T3W9 as seed ortholog is 99%.

Group of orthologs #560. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubripes:352

Q5K796              	100.00%		H2UXR7              	100.00%
Bootstrap support for Q5K796 as seed ortholog is 100%.
Bootstrap support for H2UXR7 as seed ortholog is 100%.

Group of orthologs #561. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubripes:352

Q5KIQ7              	100.00%		H2U6Z4              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for H2U6Z4 as seed ortholog is 100%.

Group of orthologs #562. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:17 T.rubripes:44

Q5KPS8              	100.00%		H2SY00              	100.00%
                    	       		H2TNL3              	74.86%
                    	       		H2UW52              	73.48%
                    	       		H2SEP5              	67.96%
                    	       		H2VA26              	38.40%
                    	       		H2SL56              	32.32%
                    	       		H2T7L2              	31.49%
                    	       		H2TU59              	11.05%
Bootstrap support for Q5KPS8 as seed ortholog is 68%.
Alternative seed ortholog is P0CN96 (17 bits away from this cluster)
Bootstrap support for H2SY00 as seed ortholog is 90%.

Group of orthologs #563. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 T.rubripes:199

Q5KE92              	100.00%		H2V8R4              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for H2V8R4 as seed ortholog is 99%.

Group of orthologs #564. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:86

P0CP68              	100.00%		H2TB66              	100.00%
                    	       		H2TBB0              	47.76%
                    	       		H2TAE9              	21.14%
                    	       		H2TA61              	18.41%
Bootstrap support for P0CP68 as seed ortholog is 96%.
Bootstrap support for H2TB66 as seed ortholog is 98%.

Group of orthologs #565. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 T.rubripes:349

Q5KP83              	100.00%		H2RYQ4              	100.00%
Bootstrap support for Q5KP83 as seed ortholog is 100%.
Bootstrap support for H2RYQ4 as seed ortholog is 100%.

Group of orthologs #566. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 T.rubripes:349

Q5KEV1              	100.00%		H2SWH7              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for H2SWH7 as seed ortholog is 100%.

Group of orthologs #567. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 T.rubripes:349

Q5KN58              	100.00%		H2UXZ3              	100.00%
Bootstrap support for Q5KN58 as seed ortholog is 100%.
Bootstrap support for H2UXZ3 as seed ortholog is 100%.

Group of orthologs #568. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 T.rubripes:348

Q5KAX6              	100.00%		H2TCD9              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for H2TCD9 as seed ortholog is 100%.

Group of orthologs #569. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 T.rubripes:348

Q5KEJ6              	100.00%		H2UUC0              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for H2UUC0 as seed ortholog is 100%.

Group of orthologs #570. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubripes:228

Q5K9K6              	100.00%		H2U317              	100.00%
                    	       		H2UD90              	74.64%
                    	       		H2TPC8              	55.70%
Bootstrap support for Q5K9K6 as seed ortholog is 100%.
Bootstrap support for H2U317 as seed ortholog is 100%.

Group of orthologs #571. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubripes:347

P0CQ24              	100.00%		H2TGC2              	100.00%
Bootstrap support for P0CQ24 as seed ortholog is 100%.
Bootstrap support for H2TGC2 as seed ortholog is 100%.

Group of orthologs #572. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubripes:59

Q5KCX9              	100.00%		H2TUT5              	100.00%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for H2TUT5 as seed ortholog is 88%.

Group of orthologs #573. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubripes:347

Q5KJ42              	100.00%		H2TVH1              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 100%.
Bootstrap support for H2TVH1 as seed ortholog is 100%.

Group of orthologs #574. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubripes:347

Q5KFQ7              	100.00%		H2V3V8              	100.00%
Bootstrap support for Q5KFQ7 as seed ortholog is 100%.
Bootstrap support for H2V3V8 as seed ortholog is 100%.

Group of orthologs #575. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubripes:347

Q5KJE3              	100.00%		H2UVJ0              	100.00%
Bootstrap support for Q5KJE3 as seed ortholog is 100%.
Bootstrap support for H2UVJ0 as seed ortholog is 100%.

Group of orthologs #576. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 T.rubripes:346

Q5KBY0              	100.00%		H2S719              	100.00%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for H2S719 as seed ortholog is 100%.

Group of orthologs #577. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:268

Q5KJJ1              	100.00%		H2UK87              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for H2UK87 as seed ortholog is 100%.

Group of orthologs #578. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubripes:345

Q5KHU9              	100.00%		H2SHE8              	100.00%
                    	       		H2TLW1              	34.14%
                    	       		H2RJV6              	27.44%
Bootstrap support for Q5KHU9 as seed ortholog is 100%.
Bootstrap support for H2SHE8 as seed ortholog is 100%.

Group of orthologs #579. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubripes:345

Q5KDU8              	100.00%		H2STL7              	100.00%
                    	       		H2SHW6              	60.55%
                    	       		H2SC76              	56.57%
Bootstrap support for Q5KDU8 as seed ortholog is 100%.
Bootstrap support for H2STL7 as seed ortholog is 100%.

Group of orthologs #580. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubripes:214

Q5KJY8              	100.00%		H2SYA5              	100.00%
                    	       		H2RS15              	9.34%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for H2SYA5 as seed ortholog is 100%.

Group of orthologs #581. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:344

Q5KAD7              	100.00%		H2UKV3              	100.00%
Bootstrap support for Q5KAD7 as seed ortholog is 100%.
Bootstrap support for H2UKV3 as seed ortholog is 100%.

Group of orthologs #582. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubripes:167

P0CP12              	100.00%		H2T0C4              	100.00%
Bootstrap support for P0CP12 as seed ortholog is 100%.
Bootstrap support for H2T0C4 as seed ortholog is 99%.

Group of orthologs #583. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 T.rubripes:342

Q5KQ48              	100.00%		H2VEC7              	100.00%
                    	       		H2UTK4              	61.26%
                    	       		H2UTT7              	41.21%
Bootstrap support for Q5KQ48 as seed ortholog is 100%.
Bootstrap support for H2VEC7 as seed ortholog is 100%.

Group of orthologs #584. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 T.rubripes:342

Q5KQ04              	100.00%		H2SP26              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for H2SP26 as seed ortholog is 100%.

Group of orthologs #585. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 T.rubripes:342

Q5KCW2              	100.00%		H2V1W8              	100.00%
Bootstrap support for Q5KCW2 as seed ortholog is 100%.
Bootstrap support for H2V1W8 as seed ortholog is 100%.

Group of orthologs #586. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:341

Q5KI73              	100.00%		H2UMN0              	100.00%
                    	       		Q802R8              	97.35%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for H2UMN0 as seed ortholog is 100%.

Group of orthologs #587. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:119

Q5KIW0              	100.00%		H2UXU8              	100.00%
                    	       		H2TQG0              	46.16%
Bootstrap support for Q5KIW0 as seed ortholog is 89%.
Bootstrap support for H2UXU8 as seed ortholog is 99%.

Group of orthologs #588. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:341

P0CS12              	100.00%		H2RXT1              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for H2RXT1 as seed ortholog is 100%.

Group of orthologs #589. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:71

Q5KG79              	100.00%		H2RWK8              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 100%.
Bootstrap support for H2RWK8 as seed ortholog is 92%.

Group of orthologs #590. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:341

Q5KAI7              	100.00%		H2TJN4              	100.00%
Bootstrap support for Q5KAI7 as seed ortholog is 100%.
Bootstrap support for H2TJN4 as seed ortholog is 100%.

Group of orthologs #591. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:341

Q5KDL7              	100.00%		H2UPS0              	100.00%
Bootstrap support for Q5KDL7 as seed ortholog is 100%.
Bootstrap support for H2UPS0 as seed ortholog is 100%.

Group of orthologs #592. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubripes:341

Q5KLE9              	100.00%		H2UTL7              	100.00%
Bootstrap support for Q5KLE9 as seed ortholog is 100%.
Bootstrap support for H2UTL7 as seed ortholog is 100%.

Group of orthologs #593. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubripes:339

Q5KEG3              	100.00%		H2RJR6              	100.00%
Bootstrap support for Q5KEG3 as seed ortholog is 100%.
Bootstrap support for H2RJR6 as seed ortholog is 100%.

Group of orthologs #594. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubripes:339

Q5KJ99              	100.00%		H2RM96              	100.00%
Bootstrap support for Q5KJ99 as seed ortholog is 100%.
Bootstrap support for H2RM96 as seed ortholog is 100%.

Group of orthologs #595. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubripes:339

Q5K7I8              	100.00%		H2TM90              	100.00%
Bootstrap support for Q5K7I8 as seed ortholog is 100%.
Bootstrap support for H2TM90 as seed ortholog is 100%.

Group of orthologs #596. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubripes:339

Q5KBP8              	100.00%		H2USB9              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for H2USB9 as seed ortholog is 100%.

Group of orthologs #597. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubripes:339

Q5KL14              	100.00%		H2UV17              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for H2UV17 as seed ortholog is 100%.

Group of orthologs #598. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubripes:338

Q5K772              	100.00%		H2RX03              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for H2RX03 as seed ortholog is 100%.

Group of orthologs #599. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubripes:338

Q5KPH3              	100.00%		H2RVW4              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for H2RVW4 as seed ortholog is 100%.

Group of orthologs #600. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 T.rubripes:337

Q5KDW3              	100.00%		H2TH32              	100.00%
Bootstrap support for Q5KDW3 as seed ortholog is 100%.
Bootstrap support for H2TH32 as seed ortholog is 100%.

Group of orthologs #601. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 T.rubripes:336

Q5KCG6              	100.00%		H2UJD2              	100.00%
Bootstrap support for Q5KCG6 as seed ortholog is 100%.
Bootstrap support for H2UJD2 as seed ortholog is 100%.

Group of orthologs #602. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:198

P0CR08              	100.00%		H2VDY1              	100.00%
Bootstrap support for P0CR08 as seed ortholog is 99%.
Bootstrap support for H2VDY1 as seed ortholog is 99%.

Group of orthologs #603. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubripes:241

Q5KGN7              	100.00%		H2UDU5              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for H2UDU5 as seed ortholog is 100%.

Group of orthologs #604. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubripes:334

Q5KCY3              	100.00%		H2SD78              	100.00%
                    	       		H2S729              	33.96%
                    	       		H2T5W4              	33.32%
Bootstrap support for Q5KCY3 as seed ortholog is 100%.
Bootstrap support for H2SD78 as seed ortholog is 100%.

Group of orthologs #605. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubripes:334

P0CM62              	100.00%		H2U8Z2              	100.00%
Bootstrap support for P0CM62 as seed ortholog is 100%.
Bootstrap support for H2U8Z2 as seed ortholog is 100%.

Group of orthologs #606. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubripes:74

Q5K8T9              	100.00%		H2U4V0              	100.00%
Bootstrap support for Q5K8T9 as seed ortholog is 100%.
Bootstrap support for H2U4V0 as seed ortholog is 97%.

Group of orthologs #607. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubripes:60

Q5KP01              	100.00%		H2THE4              	100.00%
Bootstrap support for Q5KP01 as seed ortholog is 100%.
Bootstrap support for H2THE4 as seed ortholog is 93%.

Group of orthologs #608. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 T.rubripes:333

Q5KHK9              	100.00%		H2TE80              	100.00%
Bootstrap support for Q5KHK9 as seed ortholog is 100%.
Bootstrap support for H2TE80 as seed ortholog is 100%.

Group of orthologs #609. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 T.rubripes:333

Q5KPE3              	100.00%		H2V4J5              	100.00%
Bootstrap support for Q5KPE3 as seed ortholog is 100%.
Bootstrap support for H2V4J5 as seed ortholog is 100%.

Group of orthologs #610. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 T.rubripes:332

P0CN76              	100.00%		H2UYK4              	100.00%
Q5KLY2              	26.81%		
Bootstrap support for P0CN76 as seed ortholog is 100%.
Bootstrap support for H2UYK4 as seed ortholog is 100%.

Group of orthologs #611. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:165

Q5KI66              	100.00%		H2UAA8              	100.00%
                    	       		H2UJ61              	13.39%
Bootstrap support for Q5KI66 as seed ortholog is 100%.
Bootstrap support for H2UAA8 as seed ortholog is 100%.

Group of orthologs #612. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:288

Q5KKN8              	100.00%		H2T9G0              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for H2T9G0 as seed ortholog is 100%.

Group of orthologs #613. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 T.rubripes:330

P0CQ58              	100.00%		H2UNW7              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for H2UNW7 as seed ortholog is 100%.

Group of orthologs #614. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 T.rubripes:330

Q5K8P5              	100.00%		H2VB93              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for H2VB93 as seed ortholog is 100%.

Group of orthologs #615. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubripes:13

P0CM16              	100.00%		H2UIJ6              	100.00%
                    	       		H2T1E8              	34.21%
                    	       		H2UI79              	15.79%
                    	       		P61207              	15.79%
Bootstrap support for P0CM16 as seed ortholog is 100%.
Bootstrap support for H2UIJ6 as seed ortholog is 76%.

Group of orthologs #616. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubripes:259

P0CS32              	100.00%		H2TPH7              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for H2TPH7 as seed ortholog is 100%.

Group of orthologs #617. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubripes:329

Q5KI89              	100.00%		H2TTR3              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for H2TTR3 as seed ortholog is 100%.

Group of orthologs #618. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 T.rubripes:328

Q5KGN0              	100.00%		H2TBE6              	100.00%
                    	       		H2SLQ2              	35.09%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for H2TBE6 as seed ortholog is 100%.

Group of orthologs #619. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubripes:327

Q5K8T6              	100.00%		H2RZ47              	100.00%
                    	       		H2RKK0              	56.03%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for H2RZ47 as seed ortholog is 100%.

Group of orthologs #620. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubripes:327

Q5KGG9              	100.00%		H2SGF1              	100.00%
                    	       		H2SA71              	36.49%
Bootstrap support for Q5KGG9 as seed ortholog is 100%.
Bootstrap support for H2SGF1 as seed ortholog is 100%.

Group of orthologs #621. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubripes:187

Q5KC09              	100.00%		H2TJ41              	100.00%
                    	       		H2S1H2              	50.56%
Bootstrap support for Q5KC09 as seed ortholog is 100%.
Bootstrap support for H2TJ41 as seed ortholog is 99%.

Group of orthologs #622. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:153

Q5KD56              	100.00%		H2UQ01              	100.00%
Bootstrap support for Q5KD56 as seed ortholog is 84%.
Bootstrap support for H2UQ01 as seed ortholog is 99%.

Group of orthologs #623. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:326

Q5K761              	100.00%		H2RJY9              	100.00%
                    	       		H2S788              	16.63%
Bootstrap support for Q5K761 as seed ortholog is 99%.
Bootstrap support for H2RJY9 as seed ortholog is 100%.

Group of orthologs #624. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubripes:326

Q5KI12              	100.00%		H2TWR7              	100.00%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for H2TWR7 as seed ortholog is 100%.

Group of orthologs #625. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubripes:325

Q5K9D3              	100.00%		H2SYM8              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 100%.
Bootstrap support for H2SYM8 as seed ortholog is 100%.

Group of orthologs #626. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 T.rubripes:325

P0CM56              	100.00%		H2UUC3              	100.00%
Bootstrap support for P0CM56 as seed ortholog is 100%.
Bootstrap support for H2UUC3 as seed ortholog is 100%.

Group of orthologs #627. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubripes:195

Q5KIV0              	100.00%		H2SX81              	100.00%
Bootstrap support for Q5KIV0 as seed ortholog is 100%.
Bootstrap support for H2SX81 as seed ortholog is 100%.

Group of orthologs #628. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:17

Q5KAN2              	100.00%		H2TDP8              	100.00%
                    	       		H2S245              	32.58%
                    	       		H2TWA3              	28.75%
                    	       		H2TFC5              	24.79%
                    	       		H2TA66              	14.31%
Bootstrap support for Q5KAN2 as seed ortholog is 99%.
Bootstrap support for H2TDP8 as seed ortholog is 69%.
Alternative seed ortholog is H2T8K6 (17 bits away from this cluster)

Group of orthologs #629. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubripes:54

Q5KEN3              	100.00%		H2UWG4              	100.00%
                    	       		H2TYT6              	51.85%
                    	       		H2U5G3              	21.60%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for H2UWG4 as seed ortholog is 91%.

Group of orthologs #630. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubripes:323

Q5KH10              	100.00%		H2RL95              	100.00%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for H2RL95 as seed ortholog is 100%.

Group of orthologs #631. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:33

Q5KCA0              	100.00%		H2SRG2              	100.00%
                    	       		H2TJ84              	60.27%
                    	       		H2TEV4              	44.08%
                    	       		H2RJ85              	37.82%
Bootstrap support for Q5KCA0 as seed ortholog is 100%.
Bootstrap support for H2SRG2 as seed ortholog is 84%.

Group of orthologs #632. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubripes:223

Q5KNQ9              	100.00%		H2U4L1              	100.00%
                    	       		H2RSA6              	14.60%
                    	       		H2U4P6              	10.26%
Bootstrap support for Q5KNQ9 as seed ortholog is 99%.
Bootstrap support for H2U4L1 as seed ortholog is 100%.

Group of orthologs #633. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:81

Q5K6Z2              	100.00%		H2TM74              	100.00%
Bootstrap support for Q5K6Z2 as seed ortholog is 99%.
Bootstrap support for H2TM74 as seed ortholog is 99%.

Group of orthologs #634. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubripes:81

Q5KP65              	100.00%		H2SBU8              	100.00%
Bootstrap support for Q5KP65 as seed ortholog is 100%.
Bootstrap support for H2SBU8 as seed ortholog is 98%.

Group of orthologs #635. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubripes:322

Q5KHY1              	100.00%		H2T8A5              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for H2T8A5 as seed ortholog is 100%.

Group of orthologs #636. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubripes:71

Q5KC86              	100.00%		H2UB84              	100.00%
Q5KFY4              	9.59%		H2T7U8              	40.20%
Bootstrap support for Q5KC86 as seed ortholog is 100%.
Bootstrap support for H2UB84 as seed ortholog is 99%.

Group of orthologs #637. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 T.rubripes:321

Q5KPZ1              	100.00%		H2SQQ0              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for H2SQQ0 as seed ortholog is 100%.

Group of orthologs #638. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 T.rubripes:232

Q5KG75              	100.00%		H2TMM7              	100.00%
Bootstrap support for Q5KG75 as seed ortholog is 100%.
Bootstrap support for H2TMM7 as seed ortholog is 99%.

Group of orthologs #639. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:320

Q5KJS8              	100.00%		H2UW85              	100.00%
                    	       		H2THQ9              	44.24%
Bootstrap support for Q5KJS8 as seed ortholog is 97%.
Bootstrap support for H2UW85 as seed ortholog is 100%.

Group of orthologs #640. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 T.rubripes:320

Q5KJS0              	100.00%		H2UCR7              	100.00%
Bootstrap support for Q5KJS0 as seed ortholog is 100%.
Bootstrap support for H2UCR7 as seed ortholog is 100%.

Group of orthologs #641. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:319

Q5K950              	100.00%		H2V8H1              	100.00%
                    	       		H2TMM0              	39.99%
Bootstrap support for Q5K950 as seed ortholog is 100%.
Bootstrap support for H2V8H1 as seed ortholog is 100%.

Group of orthologs #642. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:319

Q5KNF4              	100.00%		H2RLF5              	100.00%
Bootstrap support for Q5KNF4 as seed ortholog is 100%.
Bootstrap support for H2RLF5 as seed ortholog is 100%.

Group of orthologs #643. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:319

Q5K7W5              	100.00%		H2SYB3              	100.00%
Bootstrap support for Q5K7W5 as seed ortholog is 100%.
Bootstrap support for H2SYB3 as seed ortholog is 100%.

Group of orthologs #644. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:319

Q5KMA6              	100.00%		H2RYB3              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for H2RYB3 as seed ortholog is 100%.

Group of orthologs #645. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:105

Q5KPZ0              	100.00%		H2RS13              	100.00%
Bootstrap support for Q5KPZ0 as seed ortholog is 99%.
Bootstrap support for H2RS13 as seed ortholog is 98%.

Group of orthologs #646. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubripes:121

Q5K9V2              	100.00%		H2TL09              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for H2TL09 as seed ortholog is 100%.

Group of orthologs #647. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:319

Q5KIV1              	100.00%		H2TBN4              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for H2TBN4 as seed ortholog is 100%.

Group of orthologs #648. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubripes:319

Q5KEG8              	100.00%		H2UPR6              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for H2UPR6 as seed ortholog is 100%.

Group of orthologs #649. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubripes:70

Q5K8I9              	100.00%		H2RLE7              	100.00%
                    	       		H2SCN2              	100.00%
Bootstrap support for Q5K8I9 as seed ortholog is 100%.
Bootstrap support for H2RLE7 as seed ortholog is 99%.
Bootstrap support for H2SCN2 as seed ortholog is 99%.

Group of orthologs #650. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubripes:317

Q5KKK5              	100.00%		H2SF30              	100.00%
Bootstrap support for Q5KKK5 as seed ortholog is 100%.
Bootstrap support for H2SF30 as seed ortholog is 100%.

Group of orthologs #651. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubripes:317

Q5K8A2              	100.00%		H2U7A6              	100.00%
Bootstrap support for Q5K8A2 as seed ortholog is 100%.
Bootstrap support for H2U7A6 as seed ortholog is 100%.

Group of orthologs #652. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubripes:198

Q5KNA1              	100.00%		H2U3T1              	100.00%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for H2U3T1 as seed ortholog is 100%.

Group of orthologs #653. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubripes:266

Q5KAZ7              	100.00%		H2T4F0              	100.00%
Bootstrap support for Q5KAZ7 as seed ortholog is 100%.
Bootstrap support for H2T4F0 as seed ortholog is 100%.

Group of orthologs #654. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubripes:204

Q5KEZ5              	100.00%		H2SUF5              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for H2SUF5 as seed ortholog is 99%.

Group of orthologs #655. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubripes:316

Q5KQ60              	100.00%		H2TRF5              	100.00%
Bootstrap support for Q5KQ60 as seed ortholog is 100%.
Bootstrap support for H2TRF5 as seed ortholog is 100%.

Group of orthologs #656. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 T.rubripes:315

Q5KD10              	100.00%		H2S635              	100.00%
Bootstrap support for Q5KD10 as seed ortholog is 100%.
Bootstrap support for H2S635 as seed ortholog is 100%.

Group of orthologs #657. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 T.rubripes:315

Q5KHS1              	100.00%		H2SDD7              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for H2SDD7 as seed ortholog is 100%.

Group of orthologs #658. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubripes:134

Q5K6Z9              	100.00%		H2UKC0              	100.00%
Bootstrap support for Q5K6Z9 as seed ortholog is 99%.
Bootstrap support for H2UKC0 as seed ortholog is 99%.

Group of orthologs #659. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubripes:314

Q5KGP1              	100.00%		H2SWT8              	100.00%
Bootstrap support for Q5KGP1 as seed ortholog is 100%.
Bootstrap support for H2SWT8 as seed ortholog is 100%.

Group of orthologs #660. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubripes:314

Q5KK40              	100.00%		H2TCG8              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for H2TCG8 as seed ortholog is 100%.

Group of orthologs #661. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 T.rubripes:313

Q5KI91              	100.00%		H2TCZ2              	100.00%
Bootstrap support for Q5KI91 as seed ortholog is 100%.
Bootstrap support for H2TCZ2 as seed ortholog is 100%.

Group of orthologs #662. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubripes:312

Q5KCB2              	100.00%		H2TMP8              	100.00%
Bootstrap support for Q5KCB2 as seed ortholog is 100%.
Bootstrap support for H2TMP8 as seed ortholog is 100%.

Group of orthologs #663. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubripes:179

Q5KNU2              	100.00%		H2T542              	100.00%
Bootstrap support for Q5KNU2 as seed ortholog is 100%.
Bootstrap support for H2T542 as seed ortholog is 99%.

Group of orthologs #664. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubripes:312

Q5KMT6              	100.00%		H2TY93              	100.00%
Bootstrap support for Q5KMT6 as seed ortholog is 100%.
Bootstrap support for H2TY93 as seed ortholog is 100%.

Group of orthologs #665. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubripes:312

Q5K8C0              	100.00%		H2V774              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for H2V774 as seed ortholog is 100%.

Group of orthologs #666. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubripes:312

Q5KPC1              	100.00%		H2UXL7              	100.00%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for H2UXL7 as seed ortholog is 100%.

Group of orthologs #667. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubripes:264

Q5KJQ1              	100.00%		H2V1U2              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for H2V1U2 as seed ortholog is 100%.

Group of orthologs #668. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 T.rubripes:310

Q5KJ16              	100.00%		H2UIY1              	100.00%
                    	       		H2UMM5              	57.78%
Bootstrap support for Q5KJ16 as seed ortholog is 100%.
Bootstrap support for H2UIY1 as seed ortholog is 100%.

Group of orthologs #669. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubripes:157

Q5KPG1              	100.00%		H2T9B2              	100.00%
                    	       		H2SBL7              	14.30%
Bootstrap support for Q5KPG1 as seed ortholog is 100%.
Bootstrap support for H2T9B2 as seed ortholog is 98%.

Group of orthologs #670. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubripes:309

Q5KFT4              	100.00%		H2RJ89              	100.00%
Bootstrap support for Q5KFT4 as seed ortholog is 100%.
Bootstrap support for H2RJ89 as seed ortholog is 100%.

Group of orthologs #671. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubripes:309

Q5KH66              	100.00%		H2S922              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for H2S922 as seed ortholog is 100%.

Group of orthologs #672. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubripes:309

Q5KBX4              	100.00%		H2TRX0              	100.00%
Bootstrap support for Q5KBX4 as seed ortholog is 100%.
Bootstrap support for H2TRX0 as seed ortholog is 100%.

Group of orthologs #673. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:48

Q5KHY6              	100.00%		H2TBJ5              	100.00%
                    	       		H2U604              	38.97%
Bootstrap support for Q5KHY6 as seed ortholog is 98%.
Bootstrap support for H2TBJ5 as seed ortholog is 94%.

Group of orthologs #674. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 T.rubripes:308

Q5K9Y2              	100.00%		H2TFH3              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for H2TFH3 as seed ortholog is 100%.

Group of orthologs #675. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 T.rubripes:308

Q5KDM0              	100.00%		H2TMH9              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for H2TMH9 as seed ortholog is 100%.

Group of orthologs #676. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 T.rubripes:196

Q5KQ65              	100.00%		H2UAB9              	100.00%
Bootstrap support for Q5KQ65 as seed ortholog is 100%.
Bootstrap support for H2UAB9 as seed ortholog is 99%.

Group of orthologs #677. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:22

Q5KB90              	100.00%		H2SA04              	100.00%
                    	       		H2SWR8              	48.37%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for H2SA04 as seed ortholog is 42%.
Alternative seed ortholog is H2T850 (22 bits away from this cluster)

Group of orthologs #678. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubripes:307

Q5KHF9              	100.00%		H2U683              	100.00%
                    	       		H2SFF9              	23.37%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for H2U683 as seed ortholog is 100%.

Group of orthologs #679. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubripes:249

P0CS50              	100.00%		H2RTI6              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 99%.
Bootstrap support for H2RTI6 as seed ortholog is 100%.

Group of orthologs #680. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubripes:307

Q5KC90              	100.00%		H2SQF2              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for H2SQF2 as seed ortholog is 100%.

Group of orthologs #681. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubripes:307

Q5KJU2              	100.00%		H2SH26              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for H2SH26 as seed ortholog is 100%.

Group of orthologs #682. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubripes:307

Q5KIG6              	100.00%		H2SSB1              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for H2SSB1 as seed ortholog is 100%.

Group of orthologs #683. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubripes:307

P0CM80              	100.00%		H2UI47              	100.00%
Bootstrap support for P0CM80 as seed ortholog is 100%.
Bootstrap support for H2UI47 as seed ortholog is 100%.

Group of orthologs #684. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubripes:306

P0CR50              	100.00%		H2SFP1              	100.00%
Bootstrap support for P0CR50 as seed ortholog is 100%.
Bootstrap support for H2SFP1 as seed ortholog is 100%.

Group of orthologs #685. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubripes:306

Q5KJG7              	100.00%		H2SPK2              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for H2SPK2 as seed ortholog is 100%.

Group of orthologs #686. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubripes:306

Q5KEX2              	100.00%		H2T462              	100.00%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for H2T462 as seed ortholog is 100%.

Group of orthologs #687. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubripes:106

Q5KP89              	100.00%		H2RRT9              	100.00%
                    	       		H2T8F7              	100.00%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for H2RRT9 as seed ortholog is 96%.
Bootstrap support for H2T8F7 as seed ortholog is 96%.

Group of orthologs #688. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubripes:214

Q5KQ79              	100.00%		H2VCW0              	100.00%
                    	       		H2U5V1              	36.60%
Bootstrap support for Q5KQ79 as seed ortholog is 100%.
Bootstrap support for H2VCW0 as seed ortholog is 100%.

Group of orthologs #689. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubripes:305

Q5KCE8              	100.00%		H2SLF6              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 100%.
Bootstrap support for H2SLF6 as seed ortholog is 100%.

Group of orthologs #690. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubripes:305

Q5KP54              	100.00%		H2TUN6              	100.00%
Bootstrap support for Q5KP54 as seed ortholog is 100%.
Bootstrap support for H2TUN6 as seed ortholog is 100%.

Group of orthologs #691. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubripes:305

Q5KQ18              	100.00%		H2UYA5              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for H2UYA5 as seed ortholog is 100%.

Group of orthologs #692. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:304

Q5KNK5              	100.00%		H2TMC5              	100.00%
Bootstrap support for Q5KNK5 as seed ortholog is 92%.
Bootstrap support for H2TMC5 as seed ortholog is 100%.

Group of orthologs #693. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 T.rubripes:304

Q5KC51              	100.00%		H2V9Z7              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for H2V9Z7 as seed ortholog is 100%.

Group of orthologs #694. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubripes:304

Q9HFU4              	100.00%		H2UW22              	100.00%
Bootstrap support for Q9HFU4 as seed ortholog is 99%.
Bootstrap support for H2UW22 as seed ortholog is 100%.

Group of orthologs #695. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 T.rubripes:246

Q5KCK7              	100.00%		H2RWB3              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for H2RWB3 as seed ortholog is 100%.

Group of orthologs #696. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 T.rubripes:303

Q5K7E6              	100.00%		H2U0F2              	100.00%
Bootstrap support for Q5K7E6 as seed ortholog is 100%.
Bootstrap support for H2U0F2 as seed ortholog is 100%.

Group of orthologs #697. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:50

Q5KJY2              	100.00%		H2UWV1              	100.00%
Q5K854              	100.00%		H2SEG4              	100.00%
                    	       		H2U6Z8              	12.77%
Bootstrap support for Q5KJY2 as seed ortholog is 100%.
Bootstrap support for Q5K854 as seed ortholog is 100%.
Bootstrap support for H2UWV1 as seed ortholog is 99%.
Bootstrap support for H2SEG4 as seed ortholog is 98%.

Group of orthologs #698. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:302

Q5KDK5              	100.00%		H2TIP0              	100.00%
                    	       		H2SVQ8              	41.41%
Bootstrap support for Q5KDK5 as seed ortholog is 100%.
Bootstrap support for H2TIP0 as seed ortholog is 100%.

Group of orthologs #699. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:229

Q5K8T0              	100.00%		H2SE87              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for H2SE87 as seed ortholog is 100%.

Group of orthologs #700. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:302

Q5KHK1              	100.00%		H2RW05              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for H2RW05 as seed ortholog is 100%.

Group of orthologs #701. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:302

Q5KAW7              	100.00%		H2T782              	100.00%
Bootstrap support for Q5KAW7 as seed ortholog is 100%.
Bootstrap support for H2T782 as seed ortholog is 100%.

Group of orthologs #702. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:302

Q5K9U9              	100.00%		H2UI21              	100.00%
Bootstrap support for Q5K9U9 as seed ortholog is 100%.
Bootstrap support for H2UI21 as seed ortholog is 100%.

Group of orthologs #703. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubripes:302

Q5KJR0              	100.00%		H2U1X3              	100.00%
Bootstrap support for Q5KJR0 as seed ortholog is 100%.
Bootstrap support for H2U1X3 as seed ortholog is 100%.

Group of orthologs #704. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubripes:90

Q5KKP1              	100.00%		H2V9F3              	100.00%
                    	       		H2UJM6              	62.35%
Bootstrap support for Q5KKP1 as seed ortholog is 100%.
Bootstrap support for H2V9F3 as seed ortholog is 98%.

Group of orthologs #705. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 T.rubripes:301

Q5K9R5              	100.00%		H2UQM1              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for H2UQM1 as seed ortholog is 100%.

Group of orthologs #706. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5K8X8              	100.00%		H2TFR0              	100.00%
                    	       		H2TGS8              	35.00%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for H2TFR0 as seed ortholog is 100%.

Group of orthologs #707. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5KCS1              	100.00%		H2VCY1              	100.00%
                    	       		O57592              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for H2VCY1 as seed ortholog is 100%.
Bootstrap support for O57592 as seed ortholog is 100%.

Group of orthologs #708. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

P0CN50              	100.00%		H2SIB8              	100.00%
Bootstrap support for P0CN50 as seed ortholog is 100%.
Bootstrap support for H2SIB8 as seed ortholog is 100%.

Group of orthologs #709. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5K955              	100.00%		H2TPY4              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for H2TPY4 as seed ortholog is 100%.

Group of orthologs #710. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5K9W9              	100.00%		H2TPT7              	100.00%
Bootstrap support for Q5K9W9 as seed ortholog is 100%.
Bootstrap support for H2TPT7 as seed ortholog is 100%.

Group of orthologs #711. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5K9V4              	100.00%		H2TSU5              	100.00%
Bootstrap support for Q5K9V4 as seed ortholog is 100%.
Bootstrap support for H2TSU5 as seed ortholog is 100%.

Group of orthologs #712. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:215

Q5KJK3              	100.00%		H2T2B3              	100.00%
Bootstrap support for Q5KJK3 as seed ortholog is 100%.
Bootstrap support for H2T2B3 as seed ortholog is 100%.

Group of orthologs #713. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5KJZ3              	100.00%		H2TAJ2              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 100%.
Bootstrap support for H2TAJ2 as seed ortholog is 100%.

Group of orthologs #714. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5KAL7              	100.00%		H2UZM2              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for H2UZM2 as seed ortholog is 100%.

Group of orthologs #715. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

P0CP92              	100.00%		H2VCZ9              	100.00%
Bootstrap support for P0CP92 as seed ortholog is 100%.
Bootstrap support for H2VCZ9 as seed ortholog is 100%.

Group of orthologs #716. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:154

Q5KD79              	100.00%		H2UZ86              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for H2UZ86 as seed ortholog is 99%.

Group of orthologs #717. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5KGW0              	100.00%		H2UUL1              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for H2UUL1 as seed ortholog is 100%.

Group of orthologs #718. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubripes:300

Q5KLS0              	100.00%		H2V726              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for H2V726 as seed ortholog is 100%.

Group of orthologs #719. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubripes:299

Q5KIR0              	100.00%		H2TDV8              	100.00%
                    	       		H2UVU6              	12.33%
Bootstrap support for Q5KIR0 as seed ortholog is 89%.
Bootstrap support for H2TDV8 as seed ortholog is 100%.

Group of orthologs #720. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubripes:111

Q5KFD9              	100.00%		H2RWR2              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for H2RWR2 as seed ortholog is 100%.

Group of orthologs #721. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:42

Q5KLT3              	100.00%		H2T7G1              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 99%.
Bootstrap support for H2T7G1 as seed ortholog is 90%.

Group of orthologs #722. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubripes:299

Q5KFV6              	100.00%		H2TZC1              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for H2TZC1 as seed ortholog is 100%.

Group of orthologs #723. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubripes:299

Q5KK62              	100.00%		H2V4U0              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for H2V4U0 as seed ortholog is 100%.

Group of orthologs #724. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubripes:237

Q5KEJ4              	100.00%		H2S1K3              	100.00%
Bootstrap support for Q5KEJ4 as seed ortholog is 100%.
Bootstrap support for H2S1K3 as seed ortholog is 100%.

Group of orthologs #725. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubripes:298

P0CN92              	100.00%		H2UHT2              	100.00%
Bootstrap support for P0CN92 as seed ortholog is 100%.
Bootstrap support for H2UHT2 as seed ortholog is 100%.

Group of orthologs #726. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:298

Q5KEF4              	100.00%		H2U0C6              	100.00%
Bootstrap support for Q5KEF4 as seed ortholog is 99%.
Bootstrap support for H2U0C6 as seed ortholog is 100%.

Group of orthologs #727. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:297

Q5KB78              	100.00%		H2UQ08              	100.00%
                    	       		H2V1J5              	43.20%
                    	       		H2SZI7              	42.83%
Bootstrap support for Q5KB78 as seed ortholog is 100%.
Bootstrap support for H2UQ08 as seed ortholog is 100%.

Group of orthologs #728. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubripes:297

Q5KK78              	100.00%		H2RUI0              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for H2RUI0 as seed ortholog is 100%.

Group of orthologs #729. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubripes:297

Q5KF16              	100.00%		H2S9W0              	100.00%
Bootstrap support for Q5KF16 as seed ortholog is 100%.
Bootstrap support for H2S9W0 as seed ortholog is 100%.

Group of orthologs #730. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubripes:297

Q5K7J7              	100.00%		H2V4P6              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 100%.
Bootstrap support for H2V4P6 as seed ortholog is 100%.

Group of orthologs #731. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubripes:160

Q5K7W2              	100.00%		H2V1R8              	100.00%
Q5K7W1              	77.98%		H2TY54              	86.97%
                    	       		H2V7A4              	79.15%
Bootstrap support for Q5K7W2 as seed ortholog is 99%.
Bootstrap support for H2V1R8 as seed ortholog is 100%.

Group of orthologs #732. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:74

Q5KNV3              	100.00%		H2TJ72              	100.00%
                    	       		H2RV38              	35.08%
                    	       		H2TJ27              	13.23%
Bootstrap support for Q5KNV3 as seed ortholog is 94%.
Bootstrap support for H2TJ72 as seed ortholog is 91%.

Group of orthologs #733. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:40

Q5K880              	100.00%		H2VAQ1              	100.00%
                    	       		H2TY29              	79.69%
Bootstrap support for Q5K880 as seed ortholog is 100%.
Bootstrap support for H2VAQ1 as seed ortholog is 97%.

Group of orthologs #734. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 T.rubripes:296

Q5KA36              	100.00%		H2UYT1              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for H2UYT1 as seed ortholog is 100%.

Group of orthologs #735. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubripes:254

Q5KQ33              	100.00%		H2SKF6              	100.00%
                    	       		H2U609              	28.68%
                    	       		H2TV49              	19.49%
Bootstrap support for Q5KQ33 as seed ortholog is 100%.
Bootstrap support for H2SKF6 as seed ortholog is 100%.

Group of orthologs #736. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubripes:295

Q5KCG5              	100.00%		H2SM67              	100.00%
Bootstrap support for Q5KCG5 as seed ortholog is 100%.
Bootstrap support for H2SM67 as seed ortholog is 100%.

Group of orthologs #737. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubripes:295

Q5KIJ7              	100.00%		H2SN18              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for H2SN18 as seed ortholog is 100%.

Group of orthologs #738. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubripes:294

Q5KAV3              	100.00%		H2T649              	100.00%
Q5KAT4              	58.57%		H2SNL2              	56.53%
Bootstrap support for Q5KAV3 as seed ortholog is 100%.
Bootstrap support for H2T649 as seed ortholog is 100%.

Group of orthologs #739. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubripes:159

Q5KCI0              	100.00%		H2SZ73              	100.00%
                    	       		Q6SJ94              	18.90%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for H2SZ73 as seed ortholog is 100%.

Group of orthologs #740. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubripes:294

P0CO12              	100.00%		H2SHI5              	100.00%
Bootstrap support for P0CO12 as seed ortholog is 100%.
Bootstrap support for H2SHI5 as seed ortholog is 100%.

Group of orthologs #741. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubripes:294

Q5KQ43              	100.00%		H2SAR1              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for H2SAR1 as seed ortholog is 100%.

Group of orthologs #742. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubripes:294

Q5KH84              	100.00%		H2V3P5              	100.00%
Bootstrap support for Q5KH84 as seed ortholog is 100%.
Bootstrap support for H2V3P5 as seed ortholog is 100%.

Group of orthologs #743. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 T.rubripes:293

Q5KJD4              	100.00%		H2TCD8              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for H2TCD8 as seed ortholog is 100%.

Group of orthologs #744. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubripes:293

Q5KN85              	100.00%		H2V304              	100.00%
Bootstrap support for Q5KN85 as seed ortholog is 100%.
Bootstrap support for H2V304 as seed ortholog is 100%.

Group of orthologs #745. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubripes:292

P0CO52              	100.00%		H2SKW4              	100.00%
Bootstrap support for P0CO52 as seed ortholog is 100%.
Bootstrap support for H2SKW4 as seed ortholog is 100%.

Group of orthologs #746. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubripes:292

P0CN60              	100.00%		H2TC40              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for H2TC40 as seed ortholog is 100%.

Group of orthologs #747. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubripes:292

Q5KEA3              	100.00%		H2TTY3              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for H2TTY3 as seed ortholog is 100%.

Group of orthologs #748. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 T.rubripes:291

Q5KD50              	100.00%		H2T125              	100.00%
                    	       		H2UHQ1              	53.38%
                    	       		H2RK78              	46.91%
                    	       		H2TH23              	43.97%
                    	       		H2V140              	15.74%
                    	       		H2TS48              	13.97%
                    	       		H2T2I2              	9.26%
Bootstrap support for Q5KD50 as seed ortholog is 100%.
Bootstrap support for H2T125 as seed ortholog is 100%.

Group of orthologs #749. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 T.rubripes:291

Q5KPE8              	100.00%		H2RNI9              	100.00%
Bootstrap support for Q5KPE8 as seed ortholog is 100%.
Bootstrap support for H2RNI9 as seed ortholog is 100%.

Group of orthologs #750. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:104

P0CR04              	100.00%		H2V3E7              	100.00%
Bootstrap support for P0CR04 as seed ortholog is 98%.
Bootstrap support for H2V3E7 as seed ortholog is 98%.

Group of orthologs #751. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubripes:291

Q5KI80              	100.00%		H2UCD0              	100.00%
Bootstrap support for Q5KI80 as seed ortholog is 98%.
Bootstrap support for H2UCD0 as seed ortholog is 100%.

Group of orthologs #752. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 T.rubripes:291

Q5KH56              	100.00%		H2UHX7              	100.00%
Bootstrap support for Q5KH56 as seed ortholog is 100%.
Bootstrap support for H2UHX7 as seed ortholog is 100%.

Group of orthologs #753. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubripes:290

Q5K8A1              	100.00%		H2RK11              	100.00%
                    	       		H2UMA2              	49.94%
                    	       		H2SKR4              	29.68%
Bootstrap support for Q5K8A1 as seed ortholog is 100%.
Bootstrap support for H2RK11 as seed ortholog is 100%.

Group of orthologs #754. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubripes:58

Q5KI33              	100.00%		H2TPV3              	100.00%
                    	       		H2TLT6              	50.71%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for H2TPV3 as seed ortholog is 87%.

Group of orthologs #755. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubripes:290

Q5K8J5              	100.00%		H2V0J4              	100.00%
                    	       		H2T574              	37.55%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for H2V0J4 as seed ortholog is 100%.

Group of orthologs #756. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubripes:290

Q5KKU8              	100.00%		H2V1S7              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for H2V1S7 as seed ortholog is 100%.

Group of orthologs #757. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:88

Q5KQ09              	100.00%		H2SRS3              	100.00%
Q5KA14              	13.87%		
Q5KCH2              	13.38%		
Q5KJA6              	13.14%		
Q5KJA2              	12.77%		
Q5KCB5              	12.41%		
Q5KD25              	11.80%		
Q5KDS2              	10.46%		
Bootstrap support for Q5KQ09 as seed ortholog is 96%.
Bootstrap support for H2SRS3 as seed ortholog is 97%.

Group of orthologs #758. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubripes:205

Q5KKE2              	100.00%		H2UVF4              	100.00%
                    	       		H2UUI7              	20.60%
                    	       		H2U0H0              	19.00%
Bootstrap support for Q5KKE2 as seed ortholog is 100%.
Bootstrap support for H2UVF4 as seed ortholog is 100%.

Group of orthologs #759. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:289

Q5KBK6              	100.00%		H2U1D2              	100.00%
                    	       		H2U6U1              	69.83%
Bootstrap support for Q5KBK6 as seed ortholog is 99%.
Bootstrap support for H2U1D2 as seed ortholog is 100%.

Group of orthologs #760. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubripes:289

Q5KEY0              	100.00%		H2SZN1              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for H2SZN1 as seed ortholog is 100%.

Group of orthologs #761. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubripes:289

P0CN24              	100.00%		H2U9W0              	100.00%
Bootstrap support for P0CN24 as seed ortholog is 100%.
Bootstrap support for H2U9W0 as seed ortholog is 100%.

Group of orthologs #762. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 T.rubripes:192

Q5KKX6              	100.00%		H2RJ93              	100.00%
Bootstrap support for Q5KKX6 as seed ortholog is 100%.
Bootstrap support for H2RJ93 as seed ortholog is 100%.

Group of orthologs #763. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubripes:287

Q5KFU4              	100.00%		H2SLN8              	100.00%
                    	       		H2V5M4              	36.39%
                    	       		H2V5N1              	9.16%
                    	       		H2UWA5              	5.06%
Bootstrap support for Q5KFU4 as seed ortholog is 100%.
Bootstrap support for H2SLN8 as seed ortholog is 100%.

Group of orthologs #764. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubripes:287

P0CQ56              	100.00%		H2SEM4              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for H2SEM4 as seed ortholog is 100%.

Group of orthologs #765. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubripes:287

P0CR74              	100.00%		H2U9E6              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for H2U9E6 as seed ortholog is 100%.

Group of orthologs #766. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubripes:208

Q5KDC2              	100.00%		H2UAX6              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 100%.
Bootstrap support for H2UAX6 as seed ortholog is 100%.

Group of orthologs #767. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:41 T.rubripes:237

Q5KD15              	100.00%		H2V504              	100.00%
Q5KEL5              	100.00%		
Q5K981              	55.28%		
Bootstrap support for Q5KD15 as seed ortholog is 84%.
Bootstrap support for Q5KEL5 as seed ortholog is 83%.
Bootstrap support for H2V504 as seed ortholog is 100%.

Group of orthologs #768. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 T.rubripes:286

Q5KB98              	100.00%		H2UHD2              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for H2UHD2 as seed ortholog is 100%.

Group of orthologs #769. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 T.rubripes:286

Q5KAH0              	100.00%		H2UTA7              	100.00%
Bootstrap support for Q5KAH0 as seed ortholog is 100%.
Bootstrap support for H2UTA7 as seed ortholog is 100%.

Group of orthologs #770. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubripes:188

Q5KKC2              	100.00%		H2UH66              	100.00%
                    	       		H2SY19              	25.99%
                    	       		H2RWX2              	9.75%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for H2UH66 as seed ortholog is 100%.

Group of orthologs #771. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubripes:285

Q5KFM4              	100.00%		H2SWV3              	100.00%
                    	       		H2SLG4              	59.25%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for H2SWV3 as seed ortholog is 100%.

Group of orthologs #772. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubripes:285

Q5KE88              	100.00%		H2SHF6              	100.00%
Bootstrap support for Q5KE88 as seed ortholog is 99%.
Bootstrap support for H2SHF6 as seed ortholog is 100%.

Group of orthologs #773. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubripes:285

Q5KLL4              	100.00%		H2SJC9              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for H2SJC9 as seed ortholog is 100%.

Group of orthologs #774. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubripes:285

Q5KCD2              	100.00%		H2TW52              	100.00%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for H2TW52 as seed ortholog is 100%.

Group of orthologs #775. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubripes:284

Q5KJ40              	100.00%		O73806              	100.00%
                    	       		H2TWB1              	72.01%
Bootstrap support for Q5KJ40 as seed ortholog is 100%.
Bootstrap support for O73806 as seed ortholog is 100%.

Group of orthologs #776. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubripes:214

Q5KIP3              	100.00%		H2S8R2              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for H2S8R2 as seed ortholog is 99%.

Group of orthologs #777. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubripes:284

Q5KJQ8              	100.00%		H2T0Z1              	100.00%
Bootstrap support for Q5KJQ8 as seed ortholog is 100%.
Bootstrap support for H2T0Z1 as seed ortholog is 100%.

Group of orthologs #778. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubripes:283

Q5K947              	100.00%		H2RSR8              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for H2RSR8 as seed ortholog is 100%.

Group of orthologs #779. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubripes:51

Q5KJZ5              	100.00%		H2SWD7              	100.00%
                    	       		H2UZG6              	29.39%
                    	       		H2V6N1              	28.73%
                    	       		H2UH11              	16.77%
                    	       		H2V310              	16.40%
                    	       		H2URW6              	16.03%
                    	       		H2USZ3              	8.64%
                    	       		H2RNJ6              	8.42%
                    	       		H2SZS7              	6.72%
                    	       		H2T5L9              	6.65%
Bootstrap support for Q5KJZ5 as seed ortholog is 100%.
Bootstrap support for H2SWD7 as seed ortholog is 80%.

Group of orthologs #780. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubripes:282

Q5KKJ1              	100.00%		H2SZ72              	100.00%
Q5KCW7              	5.01%		
Bootstrap support for Q5KKJ1 as seed ortholog is 100%.
Bootstrap support for H2SZ72 as seed ortholog is 100%.

Group of orthologs #781. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubripes:282

P0CN94              	100.00%		H2RP56              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for H2RP56 as seed ortholog is 100%.

Group of orthologs #782. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubripes:282

Q5KQ94              	100.00%		H2RS35              	100.00%
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for H2RS35 as seed ortholog is 100%.

Group of orthologs #783. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubripes:282

Q5KIJ1              	100.00%		H2TGQ2              	100.00%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for H2TGQ2 as seed ortholog is 100%.

Group of orthologs #784. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubripes:281

Q5KPL0              	100.00%		H2U2E0              	100.00%
                    	       		H2S0R0              	58.31%
Bootstrap support for Q5KPL0 as seed ortholog is 100%.
Bootstrap support for H2U2E0 as seed ortholog is 100%.

Group of orthologs #785. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubripes:72

Q5KM47              	100.00%		H2RRI3              	100.00%
Bootstrap support for Q5KM47 as seed ortholog is 99%.
Bootstrap support for H2RRI3 as seed ortholog is 97%.

Group of orthologs #786. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:162

Q5KLW0              	100.00%		H2SBB0              	100.00%
Bootstrap support for Q5KLW0 as seed ortholog is 97%.
Bootstrap support for H2SBB0 as seed ortholog is 99%.

Group of orthologs #787. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:163

Q5K833              	100.00%		H2SR51              	100.00%
Q5K840              	76.43%		H2U450              	52.99%
                    	       		H2SPX4              	41.02%
                    	       		H2UP72              	16.05%
Bootstrap support for Q5K833 as seed ortholog is 99%.
Bootstrap support for H2SR51 as seed ortholog is 99%.

Group of orthologs #788. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:139

Q5K810              	100.00%		H2SGX0              	100.00%
                    	       		H2TEV7              	45.19%
                    	       		H2UJS5              	42.96%
Bootstrap support for Q5K810 as seed ortholog is 100%.
Bootstrap support for H2SGX0 as seed ortholog is 100%.

Group of orthologs #789. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 T.rubripes:280

P0CP30              	100.00%		H2SHH1              	100.00%
Bootstrap support for P0CP30 as seed ortholog is 100%.
Bootstrap support for H2SHH1 as seed ortholog is 100%.

Group of orthologs #790. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:280

Q5K7E4              	100.00%		H2T4F3              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 90%.
Bootstrap support for H2T4F3 as seed ortholog is 100%.

Group of orthologs #791. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubripes:280

Q5KJU9              	100.00%		H2TUV9              	100.00%
Bootstrap support for Q5KJU9 as seed ortholog is 100%.
Bootstrap support for H2TUV9 as seed ortholog is 100%.

Group of orthologs #792. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 T.rubripes:280

Q5KGE3              	100.00%		H2UWL3              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for H2UWL3 as seed ortholog is 100%.

Group of orthologs #793. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 T.rubripes:280

Q5KFZ3              	100.00%		H2UY44              	100.00%
Bootstrap support for Q5KFZ3 as seed ortholog is 100%.
Bootstrap support for H2UY44 as seed ortholog is 100%.

Group of orthologs #794. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:185

Q5KLQ6              	100.00%		H2SUN1              	100.00%
                    	       		H2UF12              	50.76%
                    	       		H2RUT8              	32.87%
                    	       		H2UR75              	27.32%
                    	       		H2S475              	26.77%
                    	       		H2TDF0              	26.77%
                    	       		H2SD67              	24.13%
                    	       		H2UJA6              	23.72%
                    	       		H2SI28              	21.22%
                    	       		H2RKJ2              	16.50%
                    	       		H2UTH6              	15.67%
Bootstrap support for Q5KLQ6 as seed ortholog is 100%.
Bootstrap support for H2SUN1 as seed ortholog is 99%.

Group of orthologs #795. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubripes:17

Q5KD75              	100.00%		H2RQ19              	100.00%
                    	       		H2UN21              	57.95%
Bootstrap support for Q5KD75 as seed ortholog is 100%.
Bootstrap support for H2RQ19 as seed ortholog is 94%.

Group of orthologs #796. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:14

Q5K7H6              	100.00%		H2S5J7              	100.00%
                    	       		H2T842              	19.71%
Bootstrap support for Q5K7H6 as seed ortholog is 100%.
Bootstrap support for H2S5J7 as seed ortholog is 57%.
Alternative seed ortholog is H2USA9 (14 bits away from this cluster)

Group of orthologs #797. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 T.rubripes:279

Q5KJJ3              	100.00%		H2TDV7              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for H2TDV7 as seed ortholog is 100%.

Group of orthologs #798. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 T.rubripes:278

Q5K8Z2              	100.00%		H2SW73              	100.00%
                    	       		H2SR30              	60.42%
Bootstrap support for Q5K8Z2 as seed ortholog is 100%.
Bootstrap support for H2SW73 as seed ortholog is 100%.

Group of orthologs #799. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 T.rubripes:184

Q5KNJ6              	100.00%		H2T7Y6              	100.00%
                    	       		H2TN50              	22.60%
Bootstrap support for Q5KNJ6 as seed ortholog is 100%.
Bootstrap support for H2T7Y6 as seed ortholog is 99%.

Group of orthologs #800. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 T.rubripes:278

Q5KGP7              	100.00%		H2S712              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for H2S712 as seed ortholog is 100%.

Group of orthologs #801. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:67

Q5KGZ4              	100.00%		H2TP27              	100.00%
                    	       		H2VC15              	63.76%
                    	       		H2RK20              	63.09%
                    	       		H2VC36              	61.74%
                    	       		H2T233              	49.66%
Bootstrap support for Q5KGZ4 as seed ortholog is 100%.
Bootstrap support for H2TP27 as seed ortholog is 99%.

Group of orthologs #802. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubripes:277

Q5KCK0              	100.00%		H2RQM9              	100.00%
Bootstrap support for Q5KCK0 as seed ortholog is 100%.
Bootstrap support for H2RQM9 as seed ortholog is 100%.

Group of orthologs #803. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubripes:277

Q5KCA4              	100.00%		H2S336              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for H2S336 as seed ortholog is 100%.

Group of orthologs #804. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubripes:277

Q5KD80              	100.00%		H2T892              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for H2T892 as seed ortholog is 100%.

Group of orthologs #805. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubripes:91

Q5KLG9              	100.00%		H2V790              	100.00%
Bootstrap support for Q5KLG9 as seed ortholog is 100%.
Bootstrap support for H2V790 as seed ortholog is 95%.

Group of orthologs #806. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubripes:276

Q5KBP2              	100.00%		H2TS57              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for H2TS57 as seed ortholog is 100%.

Group of orthologs #807. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubripes:275

Q5KEZ6              	100.00%		H2TI80              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for H2TI80 as seed ortholog is 100%.

Group of orthologs #808. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubripes:275

P0CP80              	100.00%		H2UWV3              	100.00%
Bootstrap support for P0CP80 as seed ortholog is 100%.
Bootstrap support for H2UWV3 as seed ortholog is 100%.

Group of orthologs #809. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubripes:275

Q5K9I8              	100.00%		H2V364              	100.00%
Bootstrap support for Q5K9I8 as seed ortholog is 100%.
Bootstrap support for H2V364 as seed ortholog is 100%.

Group of orthologs #810. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubripes:275

Q5K902              	100.00%		H2V6H7              	100.00%
Bootstrap support for Q5K902 as seed ortholog is 100%.
Bootstrap support for H2V6H7 as seed ortholog is 100%.

Group of orthologs #811. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KAJ1              	100.00%		H2UMF5              	100.00%
                    	       		H2U7T0              	35.65%
                    	       		H2SN75              	33.26%
                    	       		H2U9G9              	32.80%
Bootstrap support for Q5KAJ1 as seed ortholog is 100%.
Bootstrap support for H2UMF5 as seed ortholog is 100%.

Group of orthologs #812. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KEB2              	100.00%		H2T7H2              	100.00%
                    	       		H2V9H0              	24.16%
Bootstrap support for Q5KEB2 as seed ortholog is 100%.
Bootstrap support for H2T7H2 as seed ortholog is 100%.

Group of orthologs #813. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

P0CO14              	100.00%		H2S5C0              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for H2S5C0 as seed ortholog is 100%.

Group of orthologs #814. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5K8U2              	100.00%		H2T0L8              	100.00%
Bootstrap support for Q5K8U2 as seed ortholog is 100%.
Bootstrap support for H2T0L8 as seed ortholog is 100%.

Group of orthologs #815. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KCK3              	100.00%		H2TGB0              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for H2TGB0 as seed ortholog is 100%.

Group of orthologs #816. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KG36              	100.00%		H2TD56              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for H2TD56 as seed ortholog is 100%.

Group of orthologs #817. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KFC5              	100.00%		H2TWV2              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for H2TWV2 as seed ortholog is 100%.

Group of orthologs #818. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubripes:200

Q5KMX1              	100.00%		H2TT90              	100.00%
Bootstrap support for Q5KMX1 as seed ortholog is 100%.
Bootstrap support for H2TT90 as seed ortholog is 100%.

Group of orthologs #819. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KCP8              	100.00%		H2V2K9              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for H2V2K9 as seed ortholog is 100%.

Group of orthologs #820. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubripes:274

Q5KN41              	100.00%		H2UE88              	100.00%
Bootstrap support for Q5KN41 as seed ortholog is 100%.
Bootstrap support for H2UE88 as seed ortholog is 100%.

Group of orthologs #821. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 T.rubripes:114

Q5KF44              	100.00%		H2SE66              	100.00%
Q5K8X3              	6.26%		H2V004              	55.10%
                    	       		H2S9C7              	50.42%
Bootstrap support for Q5KF44 as seed ortholog is 100%.
Bootstrap support for H2SE66 as seed ortholog is 94%.

Group of orthologs #822. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:23

Q5KDE0              	100.00%		H2SKP8              	100.00%
Bootstrap support for Q5KDE0 as seed ortholog is 100%.
Bootstrap support for H2SKP8 as seed ortholog is 71%.
Alternative seed ortholog is H2U3M2 (23 bits away from this cluster)

Group of orthologs #823. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:74

Q5KDV8              	100.00%		H2TSH5              	100.00%
                    	       		H2U7X2              	100.00%
                    	       		H2TZX5              	85.25%
                    	       		H2TNE6              	72.95%
                    	       		H2VBC0              	38.52%
Bootstrap support for Q5KDV8 as seed ortholog is 99%.
Bootstrap support for H2TSH5 as seed ortholog is 99%.
Bootstrap support for H2U7X2 as seed ortholog is 99%.

Group of orthologs #824. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubripes:68

Q5K995              	100.00%		H2TWJ3              	100.00%
                    	       		H2UXT6              	48.64%
                    	       		H2SX24              	47.09%
                    	       		H2SAJ6              	38.79%
Bootstrap support for Q5K995 as seed ortholog is 97%.
Bootstrap support for H2TWJ3 as seed ortholog is 99%.

Group of orthologs #825. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubripes:37

Q5KBD9              	100.00%		H2TDW8              	100.00%
                    	       		H2SEK7              	48.16%
Bootstrap support for Q5KBD9 as seed ortholog is 100%.
Bootstrap support for H2TDW8 as seed ortholog is 67%.
Alternative seed ortholog is H2U4L8 (37 bits away from this cluster)

Group of orthologs #826. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubripes:272

Q5K9E9              	100.00%		H2SR85              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for H2SR85 as seed ortholog is 100%.

Group of orthologs #827. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubripes:106

Q5KNI6              	100.00%		H2RTQ6              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for H2RTQ6 as seed ortholog is 99%.

Group of orthologs #828. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubripes:141

P0CM04              	100.00%		H2UE99              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 100%.
Bootstrap support for H2UE99 as seed ortholog is 99%.

Group of orthologs #829. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:214

Q5KA61              	100.00%		H2VA25              	100.00%
Bootstrap support for Q5KA61 as seed ortholog is 99%.
Bootstrap support for H2VA25 as seed ortholog is 99%.

Group of orthologs #830. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubripes:99

Q5KPK6              	100.00%		H2VAX8              	100.00%
                    	       		H2TSF3              	9.69%
                    	       		H2TWF8              	6.77%
                    	       		H2T1E5              	5.73%
Bootstrap support for Q5KPK6 as seed ortholog is 100%.
Bootstrap support for H2VAX8 as seed ortholog is 99%.

Group of orthologs #831. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubripes:271

P0CP10              	100.00%		H2SLW5              	100.00%
                    	       		H2T8V6              	16.02%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for H2SLW5 as seed ortholog is 100%.

Group of orthologs #832. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:97

Q5KEY2              	100.00%		H2TGH1              	100.00%
                    	       		H2V460              	88.98%
Bootstrap support for Q5KEY2 as seed ortholog is 99%.
Bootstrap support for H2TGH1 as seed ortholog is 97%.

Group of orthologs #833. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubripes:174

Q5KG91              	100.00%		H2RPU0              	100.00%
                    	       		H2TC70              	25.74%
Bootstrap support for Q5KG91 as seed ortholog is 100%.
Bootstrap support for H2RPU0 as seed ortholog is 100%.

Group of orthologs #834. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubripes:270

Q5KJN6              	100.00%		H2V4T0              	100.00%
                    	       		H2U1Y4              	16.00%
Bootstrap support for Q5KJN6 as seed ortholog is 100%.
Bootstrap support for H2V4T0 as seed ortholog is 100%.

Group of orthologs #835. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubripes:270

Q5K6T5              	100.00%		H2S6S1              	100.00%
Bootstrap support for Q5K6T5 as seed ortholog is 100%.
Bootstrap support for H2S6S1 as seed ortholog is 100%.

Group of orthologs #836. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:100

Q5K9W3              	100.00%		H2SYQ0              	100.00%
Bootstrap support for Q5K9W3 as seed ortholog is 99%.
Bootstrap support for H2SYQ0 as seed ortholog is 99%.

Group of orthologs #837. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubripes:270

Q5KFG2              	100.00%		H2V006              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for H2V006 as seed ortholog is 100%.

Group of orthologs #838. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubripes:160

Q5KGD8              	100.00%		H2RR96              	100.00%
                    	       		H2T805              	26.58%
Bootstrap support for Q5KGD8 as seed ortholog is 100%.
Bootstrap support for H2RR96 as seed ortholog is 99%.

Group of orthologs #839. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:105

P0CO42              	100.00%		H2RRV5              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 99%.
Bootstrap support for H2RRV5 as seed ortholog is 99%.

Group of orthologs #840. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubripes:215

Q5K7Y4              	100.00%		H2TT72              	100.00%
Bootstrap support for Q5K7Y4 as seed ortholog is 100%.
Bootstrap support for H2TT72 as seed ortholog is 100%.

Group of orthologs #841. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubripes:269

Q5KG73              	100.00%		H2V0B1              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 100%.
Bootstrap support for H2V0B1 as seed ortholog is 100%.

Group of orthologs #842. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:137

Q5KH15              	100.00%		H2UMF0              	100.00%
                    	       		H2T9C0              	83.03%
                    	       		H2SGM4              	77.30%
Bootstrap support for Q5KH15 as seed ortholog is 99%.
Bootstrap support for H2UMF0 as seed ortholog is 99%.

Group of orthologs #843. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 T.rubripes:169

Q5KBQ7              	100.00%		H2TP86              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for H2TP86 as seed ortholog is 100%.

Group of orthologs #844. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubripes:267

Q5KGF3              	100.00%		H2U412              	100.00%
Bootstrap support for Q5KGF3 as seed ortholog is 100%.
Bootstrap support for H2U412 as seed ortholog is 100%.

Group of orthologs #845. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubripes:267

Q5K6Y9              	100.00%		H2V5J5              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for H2V5J5 as seed ortholog is 100%.

Group of orthologs #846. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubripes:266

P0CO28              	100.00%		H2UDT3              	100.00%
Bootstrap support for P0CO28 as seed ortholog is 100%.
Bootstrap support for H2UDT3 as seed ortholog is 100%.

Group of orthologs #847. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubripes:55

Q5KCH7              	100.00%		H2SIM7              	100.00%
                    	       		H2V2B6              	53.27%
                    	       		H2SIP5              	32.18%
                    	       		H2TP89              	5.64%
Bootstrap support for Q5KCH7 as seed ortholog is 69%.
Alternative seed ortholog is Q5KB17 (19 bits away from this cluster)
Bootstrap support for H2SIM7 as seed ortholog is 94%.

Group of orthologs #848. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubripes:265

Q5K737              	100.00%		H2RXJ4              	100.00%
Bootstrap support for Q5K737 as seed ortholog is 100%.
Bootstrap support for H2RXJ4 as seed ortholog is 100%.

Group of orthologs #849. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubripes:265

Q5KAQ7              	100.00%		H2SNZ0              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for H2SNZ0 as seed ortholog is 100%.

Group of orthologs #850. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:265

P0CO48              	100.00%		H2TVW8              	100.00%
Bootstrap support for P0CO48 as seed ortholog is 99%.
Bootstrap support for H2TVW8 as seed ortholog is 100%.

Group of orthologs #851. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubripes:265

P0CM46              	100.00%		H2UBD2              	100.00%
Bootstrap support for P0CM46 as seed ortholog is 100%.
Bootstrap support for H2UBD2 as seed ortholog is 100%.

Group of orthologs #852. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubripes:265

Q5KLV9              	100.00%		H2TJF7              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for H2TJF7 as seed ortholog is 100%.

Group of orthologs #853. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:193

Q5K7V7              	100.00%		H2V241              	100.00%
Bootstrap support for Q5K7V7 as seed ortholog is 100%.
Bootstrap support for H2V241 as seed ortholog is 100%.

Group of orthologs #854. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:265

Q5KJV3              	100.00%		H2USE9              	100.00%
Bootstrap support for Q5KJV3 as seed ortholog is 91%.
Bootstrap support for H2USE9 as seed ortholog is 100%.

Group of orthologs #855. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:264

Q5KJM5              	100.00%		H2TJE5              	100.00%
                    	       		H2TTL6              	74.42%
                    	       		H2SND8              	68.99%
                    	       		H2SFT9              	68.35%
Bootstrap support for Q5KJM5 as seed ortholog is 100%.
Bootstrap support for H2TJE5 as seed ortholog is 100%.

Group of orthologs #856. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:60

Q5K9R8              	100.00%		H2RLM5              	100.00%
                    	       		H2RV86              	50.50%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for H2RLM5 as seed ortholog is 98%.

Group of orthologs #857. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:264

Q5K9K4              	100.00%		H2SHR4              	100.00%
Bootstrap support for Q5K9K4 as seed ortholog is 100%.
Bootstrap support for H2SHR4 as seed ortholog is 100%.

Group of orthologs #858. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:51

Q5KI67              	100.00%		H2U657              	100.00%
Bootstrap support for Q5KI67 as seed ortholog is 100%.
Bootstrap support for H2U657 as seed ortholog is 94%.

Group of orthologs #859. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:264

Q5K9Y4              	100.00%		H2UZY0              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for H2UZY0 as seed ortholog is 100%.

Group of orthologs #860. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubripes:264

Q5KNX1              	100.00%		H2U3K8              	100.00%
Bootstrap support for Q5KNX1 as seed ortholog is 100%.
Bootstrap support for H2U3K8 as seed ortholog is 100%.

Group of orthologs #861. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:109

Q5KGS1              	100.00%		H2U0D4              	100.00%
                    	       		H2T3U3              	65.45%
Bootstrap support for Q5KGS1 as seed ortholog is 100%.
Bootstrap support for H2U0D4 as seed ortholog is 99%.

Group of orthologs #862. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubripes:178

Q5KLY0              	100.00%		H2UIG0              	100.00%
                    	       		H2UK16              	70.78%
Bootstrap support for Q5KLY0 as seed ortholog is 100%.
Bootstrap support for H2UIG0 as seed ortholog is 100%.

Group of orthologs #863. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubripes:263

Q5KC15              	100.00%		H2RKE2              	100.00%
Bootstrap support for Q5KC15 as seed ortholog is 100%.
Bootstrap support for H2RKE2 as seed ortholog is 100%.

Group of orthologs #864. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubripes:263

Q5KKJ4              	100.00%		H2TIL1              	100.00%
Bootstrap support for Q5KKJ4 as seed ortholog is 100%.
Bootstrap support for H2TIL1 as seed ortholog is 100%.

Group of orthologs #865. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubripes:262

Q5KCL1              	100.00%		H2UZC7              	100.00%
                    	       		H2UJQ2              	30.48%
                    	       		H2RYM6              	24.36%
Bootstrap support for Q5KCL1 as seed ortholog is 100%.
Bootstrap support for H2UZC7 as seed ortholog is 100%.

Group of orthologs #866. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubripes:69

Q5K7E1              	100.00%		H2RLY5              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for H2RLY5 as seed ortholog is 88%.

Group of orthologs #867. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubripes:262

Q5KBR5              	100.00%		H2SPU5              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for H2SPU5 as seed ortholog is 100%.

Group of orthologs #868. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubripes:217

Q5KNE6              	100.00%		H2SWJ3              	100.00%
Q5K809              	51.11%		
Bootstrap support for Q5KNE6 as seed ortholog is 100%.
Bootstrap support for H2SWJ3 as seed ortholog is 99%.

Group of orthologs #869. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubripes:261

Q5K9F7              	100.00%		H2SHS0              	100.00%
Bootstrap support for Q5K9F7 as seed ortholog is 100%.
Bootstrap support for H2SHS0 as seed ortholog is 100%.

Group of orthologs #870. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubripes:146

Q5KC50              	100.00%		H2UBV1              	100.00%
Bootstrap support for Q5KC50 as seed ortholog is 100%.
Bootstrap support for H2UBV1 as seed ortholog is 100%.

Group of orthologs #871. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubripes:56

Q5KAK1              	100.00%		H2THX9              	100.00%
                    	       		H2U3Z1              	47.36%
                    	       		H2RPT5              	24.67%
Bootstrap support for Q5KAK1 as seed ortholog is 100%.
Bootstrap support for H2THX9 as seed ortholog is 95%.

Group of orthologs #872. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubripes:50

Q5KF72              	100.00%		H2TFL0              	100.00%
                    	       		H2STM0              	54.72%
Bootstrap support for Q5KF72 as seed ortholog is 100%.
Bootstrap support for H2TFL0 as seed ortholog is 99%.

Group of orthologs #873. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubripes:260

Q5KKR0              	100.00%		H2SUY2              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for H2SUY2 as seed ortholog is 100%.

Group of orthologs #874. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubripes:260

Q5KC07              	100.00%		H2TTD3              	100.00%
Bootstrap support for Q5KC07 as seed ortholog is 100%.
Bootstrap support for H2TTD3 as seed ortholog is 100%.

Group of orthologs #875. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubripes:260

Q5K6V3              	100.00%		H2UAP2              	100.00%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for H2UAP2 as seed ortholog is 100%.

Group of orthologs #876. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubripes:260

Q5KH08              	100.00%		H2TVU2              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for H2TVU2 as seed ortholog is 100%.

Group of orthologs #877. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubripes:260

Q5KJC9              	100.00%		H2TXU3              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for H2TXU3 as seed ortholog is 100%.

Group of orthologs #878. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubripes:260

Q5K8D6              	100.00%		Q90511              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for Q90511 as seed ortholog is 100%.

Group of orthologs #879. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:175

Q5KKF0              	100.00%		H2V4R6              	100.00%
Bootstrap support for Q5KKF0 as seed ortholog is 99%.
Bootstrap support for H2V4R6 as seed ortholog is 99%.

Group of orthologs #880. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubripes:79

P0CQ20              	100.00%		H2RNK2              	100.00%
P0CQ18              	49.22%		
Bootstrap support for P0CQ20 as seed ortholog is 100%.
Bootstrap support for H2RNK2 as seed ortholog is 89%.

Group of orthologs #881. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubripes:259

P0CO82              	100.00%		Q9YGN1              	100.00%
                    	       		H2UFD3              	23.29%
Bootstrap support for P0CO82 as seed ortholog is 100%.
Bootstrap support for Q9YGN1 as seed ortholog is 100%.

Group of orthologs #882. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubripes:259

Q5KIM1              	100.00%		H2U836              	100.00%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for H2U836 as seed ortholog is 100%.

Group of orthologs #883. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubripes:259

Q5KQ29              	100.00%		H2TVU8              	100.00%
Bootstrap support for Q5KQ29 as seed ortholog is 100%.
Bootstrap support for H2TVU8 as seed ortholog is 100%.

Group of orthologs #884. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubripes:140

Q5KAA5              	100.00%		H2TAT5              	100.00%
                    	       		H2V4C4              	33.22%
                    	       		H2TUJ9              	32.61%
                    	       		H2TX69              	6.99%
Bootstrap support for Q5KAA5 as seed ortholog is 100%.
Bootstrap support for H2TAT5 as seed ortholog is 79%.

Group of orthologs #885. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubripes:67

Q5KQ59              	100.00%		H2V801              	100.00%
Q5KAY9              	100.00%		H2TB44              	100.00%
                    	       		H2UV59              	56.07%
                    	       		H2T9L8              	49.32%
Bootstrap support for Q5KQ59 as seed ortholog is 100%.
Bootstrap support for Q5KAY9 as seed ortholog is 100%.
Bootstrap support for H2V801 as seed ortholog is 96%.
Bootstrap support for H2TB44 as seed ortholog is 54%.
Alternative seed ortholog is H2U5Z0 (67 bits away from this cluster)

Group of orthologs #886. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:134

Q5KCR3              	100.00%		H2UAE2              	100.00%
                    	       		H2UWW2              	22.94%
Bootstrap support for Q5KCR3 as seed ortholog is 100%.
Bootstrap support for H2UAE2 as seed ortholog is 99%.

Group of orthologs #887. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubripes:257

Q5K6Y3              	100.00%		H2S2M9              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for H2S2M9 as seed ortholog is 100%.

Group of orthologs #888. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubripes:257

Q5KA19              	100.00%		H2SGK1              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for H2SGK1 as seed ortholog is 100%.

Group of orthologs #889. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubripes:195

Q5KJ01              	100.00%		H2TAT4              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for H2TAT4 as seed ortholog is 100%.

Group of orthologs #890. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubripes:257

Q5KK45              	100.00%		H2TY28              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for H2TY28 as seed ortholog is 100%.

Group of orthologs #891. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:113

Q5KKF5              	100.00%		H2U574              	100.00%
Bootstrap support for Q5KKF5 as seed ortholog is 98%.
Bootstrap support for H2U574 as seed ortholog is 99%.

Group of orthologs #892. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 T.rubripes:256

Q5KEH0              	100.00%		H2SAE9              	100.00%
                    	       		H2RY07              	24.73%
Bootstrap support for Q5KEH0 as seed ortholog is 100%.
Bootstrap support for H2SAE9 as seed ortholog is 100%.

Group of orthologs #893. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 T.rubripes:256

P0CM44              	100.00%		H2RTU3              	100.00%
Bootstrap support for P0CM44 as seed ortholog is 100%.
Bootstrap support for H2RTU3 as seed ortholog is 100%.

Group of orthologs #894. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 T.rubripes:256

Q5KMV4              	100.00%		H2SE69              	100.00%
Bootstrap support for Q5KMV4 as seed ortholog is 100%.
Bootstrap support for H2SE69 as seed ortholog is 100%.

Group of orthologs #895. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubripes:255

Q5KC64              	100.00%		H2S325              	100.00%
Bootstrap support for Q5KC64 as seed ortholog is 100%.
Bootstrap support for H2S325 as seed ortholog is 100%.

Group of orthologs #896. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubripes:255

Q5KAP5              	100.00%		H2UQW7              	100.00%
Bootstrap support for Q5KAP5 as seed ortholog is 100%.
Bootstrap support for H2UQW7 as seed ortholog is 100%.

Group of orthologs #897. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubripes:254

Q5KEW8              	100.00%		H2ULN7              	100.00%
Q5KD36              	34.98%		
Q5KDR9              	34.48%		
Bootstrap support for Q5KEW8 as seed ortholog is 100%.
Bootstrap support for H2ULN7 as seed ortholog is 100%.

Group of orthologs #898. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubripes:254

Q5KBS3              	100.00%		H2SJJ9              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for H2SJJ9 as seed ortholog is 100%.

Group of orthologs #899. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:160

Q5KHD3              	100.00%		H2SJG3              	100.00%
Bootstrap support for Q5KHD3 as seed ortholog is 99%.
Bootstrap support for H2SJG3 as seed ortholog is 99%.

Group of orthologs #900. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

P0CO26              	100.00%		H2TCW8              	100.00%
                    	       		H2TH04              	17.32%
Bootstrap support for P0CO26 as seed ortholog is 100%.
Bootstrap support for H2TCW8 as seed ortholog is 100%.

Group of orthologs #901. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KNJ8              	100.00%		H2U4V3              	100.00%
                    	       		H2SQK4              	50.68%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for H2U4V3 as seed ortholog is 100%.

Group of orthologs #902. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:92

Q5KLM4              	100.00%		H2RP19              	100.00%
Bootstrap support for Q5KLM4 as seed ortholog is 100%.
Bootstrap support for H2RP19 as seed ortholog is 99%.

Group of orthologs #903. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5K8G1              	100.00%		H2T6X8              	100.00%
Bootstrap support for Q5K8G1 as seed ortholog is 100%.
Bootstrap support for H2T6X8 as seed ortholog is 100%.

Group of orthologs #904. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KDJ7              	100.00%		H2SZT8              	100.00%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for H2SZT8 as seed ortholog is 100%.

Group of orthologs #905. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KE84              	100.00%		H2T2Q3              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for H2T2Q3 as seed ortholog is 100%.

Group of orthologs #906. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KIN9              	100.00%		H2TDJ6              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for H2TDJ6 as seed ortholog is 100%.

Group of orthologs #907. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KPK4              	100.00%		H2T7J8              	100.00%
Bootstrap support for Q5KPK4 as seed ortholog is 100%.
Bootstrap support for H2T7J8 as seed ortholog is 100%.

Group of orthologs #908. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KPS9              	100.00%		H2UI23              	100.00%
Bootstrap support for Q5KPS9 as seed ortholog is 100%.
Bootstrap support for H2UI23 as seed ortholog is 100%.

Group of orthologs #909. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubripes:253

Q5KIF8              	100.00%		H2VBZ7              	100.00%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for H2VBZ7 as seed ortholog is 100%.

Group of orthologs #910. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:94

Q5KJK0              	100.00%		H2TXN3              	100.00%
                    	       		H2S6Q5              	95.56%
Bootstrap support for Q5KJK0 as seed ortholog is 100%.
Bootstrap support for H2TXN3 as seed ortholog is 100%.

Group of orthologs #911. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:38 T.rubripes:252

Q5KFI9              	100.00%		H2RZM0              	100.00%
Bootstrap support for Q5KFI9 as seed ortholog is 81%.
Bootstrap support for H2RZM0 as seed ortholog is 100%.

Group of orthologs #912. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubripes:252

Q5KFT0              	100.00%		H2T170              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for H2T170 as seed ortholog is 100%.

Group of orthologs #913. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:252

Q5KFR5              	100.00%		H2T242              	100.00%
Bootstrap support for Q5KFR5 as seed ortholog is 99%.
Bootstrap support for H2T242 as seed ortholog is 100%.

Group of orthologs #914. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubripes:251

Q5KC89              	100.00%		H2RJ98              	100.00%
                    	       		H2SCP6              	21.86%
Bootstrap support for Q5KC89 as seed ortholog is 100%.
Bootstrap support for H2RJ98 as seed ortholog is 100%.

Group of orthologs #915. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubripes:251

P0CN10              	100.00%		H2T0E0              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for H2T0E0 as seed ortholog is 100%.

Group of orthologs #916. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubripes:251

P0CS14              	100.00%		H2TXE8              	100.00%
Bootstrap support for P0CS14 as seed ortholog is 100%.
Bootstrap support for H2TXE8 as seed ortholog is 100%.

Group of orthologs #917. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubripes:250

Q5K936              	100.00%		H2TD61              	100.00%
                    	       		H2SFB8              	32.76%
Bootstrap support for Q5K936 as seed ortholog is 100%.
Bootstrap support for H2TD61 as seed ortholog is 100%.

Group of orthologs #918. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubripes:250

Q5KGH4              	100.00%		H2T0R8              	100.00%
Bootstrap support for Q5KGH4 as seed ortholog is 100%.
Bootstrap support for H2T0R8 as seed ortholog is 100%.

Group of orthologs #919. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubripes:250

Q5KA59              	100.00%		H2UH67              	100.00%
Bootstrap support for Q5KA59 as seed ortholog is 100%.
Bootstrap support for H2UH67 as seed ortholog is 100%.

Group of orthologs #920. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubripes:249

Q5K8A5              	100.00%		H2S0A9              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for H2S0A9 as seed ortholog is 100%.

Group of orthologs #921. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubripes:249

Q5K8Q5              	100.00%		H2T6A1              	100.00%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for H2T6A1 as seed ortholog is 100%.

Group of orthologs #922. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubripes:249

Q5KJB8              	100.00%		H2T792              	100.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for H2T792 as seed ortholog is 100%.

Group of orthologs #923. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:47

Q5KK41              	100.00%		H2T0N3              	100.00%
                    	       		H2U2Y0              	57.41%
                    	       		H2TP16              	43.83%
                    	       		H2RUN2              	12.96%
                    	       		H2TVW3              	11.73%
Bootstrap support for Q5KK41 as seed ortholog is 100%.
Bootstrap support for H2T0N3 as seed ortholog is 96%.

Group of orthologs #924. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubripes:248

Q5KDH9              	100.00%		H2TT04              	100.00%
                    	       		H2UPL0              	100.00%
Bootstrap support for Q5KDH9 as seed ortholog is 100%.
Bootstrap support for H2TT04 as seed ortholog is 100%.
Bootstrap support for H2UPL0 as seed ortholog is 100%.

Group of orthologs #925. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubripes:137

Q5KNZ3              	100.00%		H2TUX4              	100.00%
                    	       		H2TW33              	15.92%
Bootstrap support for Q5KNZ3 as seed ortholog is 99%.
Bootstrap support for H2TUX4 as seed ortholog is 99%.

Group of orthologs #926. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubripes:248

Q5KLE6              	100.00%		H2RK92              	100.00%
Bootstrap support for Q5KLE6 as seed ortholog is 100%.
Bootstrap support for H2RK92 as seed ortholog is 100%.

Group of orthologs #927. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubripes:62

Q5KM42              	100.00%		H2RU70              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 100%.
Bootstrap support for H2RU70 as seed ortholog is 99%.

Group of orthologs #928. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubripes:248

Q5KQ30              	100.00%		H2RSB9              	100.00%
Bootstrap support for Q5KQ30 as seed ortholog is 100%.
Bootstrap support for H2RSB9 as seed ortholog is 100%.

Group of orthologs #929. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubripes:247

Q5K8G6              	100.00%		H2UDI6              	100.00%
Bootstrap support for Q5K8G6 as seed ortholog is 100%.
Bootstrap support for H2UDI6 as seed ortholog is 100%.

Group of orthologs #930. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubripes:247

Q5KB01              	100.00%		H2U7R2              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for H2U7R2 as seed ortholog is 100%.

Group of orthologs #931. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubripes:149

Q5KBS2              	100.00%		H2UEM8              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for H2UEM8 as seed ortholog is 100%.

Group of orthologs #932. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubripes:247

P0CM14              	100.00%		H2UX72              	100.00%
Bootstrap support for P0CM14 as seed ortholog is 100%.
Bootstrap support for H2UX72 as seed ortholog is 100%.

Group of orthologs #933. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubripes:247

Q5KF23              	100.00%		H2UKL0              	100.00%
Bootstrap support for Q5KF23 as seed ortholog is 100%.
Bootstrap support for H2UKL0 as seed ortholog is 100%.

Group of orthologs #934. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:142

P0CR30              	100.00%		H2T9S6              	100.00%
                    	       		H2SZU4              	56.69%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for H2T9S6 as seed ortholog is 100%.

Group of orthologs #935. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 T.rubripes:123

Q5KFC1              	100.00%		H2SB60              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 100%.
Bootstrap support for H2SB60 as seed ortholog is 99%.

Group of orthologs #936. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 T.rubripes:246

Q5K8I5              	100.00%		H2UXU6              	100.00%
Bootstrap support for Q5K8I5 as seed ortholog is 100%.
Bootstrap support for H2UXU6 as seed ortholog is 100%.

Group of orthologs #937. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:26

P0CO04              	100.00%		H2SH61              	100.00%
Q5KMT3              	100.00%		H2RVI8              	100.00%
                    	       		H2T664              	95.65%
Bootstrap support for P0CO04 as seed ortholog is 100%.
Bootstrap support for Q5KMT3 as seed ortholog is 99%.
Bootstrap support for H2SH61 as seed ortholog is 96%.
Bootstrap support for H2RVI8 as seed ortholog is 93%.

Group of orthologs #938. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:39 T.rubripes:245

Q5KA78              	100.00%		H2RN81              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 78%.
Bootstrap support for H2RN81 as seed ortholog is 100%.

Group of orthologs #939. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:35 T.rubripes:245

Q5KIW9              	100.00%		H2RUM1              	100.00%
Bootstrap support for Q5KIW9 as seed ortholog is 69%.
Alternative seed ortholog is Q5KAH9 (35 bits away from this cluster)
Bootstrap support for H2RUM1 as seed ortholog is 100%.

Group of orthologs #940. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

Q5KCD5              	100.00%		H2SIV2              	100.00%
Bootstrap support for Q5KCD5 as seed ortholog is 100%.
Bootstrap support for H2SIV2 as seed ortholog is 100%.

Group of orthologs #941. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

P0CN40              	100.00%		H2TSE3              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for H2TSE3 as seed ortholog is 100%.

Group of orthologs #942. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

Q5K9C7              	100.00%		H2TV24              	100.00%
Bootstrap support for Q5K9C7 as seed ortholog is 100%.
Bootstrap support for H2TV24 as seed ortholog is 100%.

Group of orthologs #943. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

Q5KLE7              	100.00%		H2TCF6              	100.00%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for H2TCF6 as seed ortholog is 100%.

Group of orthologs #944. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

Q5K6V6              	100.00%		H2UKE8              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for H2UKE8 as seed ortholog is 100%.

Group of orthologs #945. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

Q5KKM0              	100.00%		H2TKW0              	100.00%
Bootstrap support for Q5KKM0 as seed ortholog is 100%.
Bootstrap support for H2TKW0 as seed ortholog is 100%.

Group of orthologs #946. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:149

Q5KEK2              	100.00%		H2U965              	100.00%
Bootstrap support for Q5KEK2 as seed ortholog is 99%.
Bootstrap support for H2U965 as seed ortholog is 100%.

Group of orthologs #947. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubripes:245

Q5KL73              	100.00%		H2USL4              	100.00%
Bootstrap support for Q5KL73 as seed ortholog is 100%.
Bootstrap support for H2USL4 as seed ortholog is 100%.

Group of orthologs #948. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubripes:183

Q5KKT3              	100.00%		H2TWD4              	100.00%
Bootstrap support for Q5KKT3 as seed ortholog is 100%.
Bootstrap support for H2TWD4 as seed ortholog is 99%.

Group of orthologs #949. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:81

Q5K6V5              	100.00%		H2STG0              	100.00%
                    	       		H2TKY4              	8.42%
                    	       		H2UJ11              	7.74%
Bootstrap support for Q5K6V5 as seed ortholog is 98%.
Bootstrap support for H2STG0 as seed ortholog is 99%.

Group of orthologs #950. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:102

Q5KCQ7              	100.00%		H2TML1              	100.00%
                    	       		H2VDN8              	85.85%
                    	       		H2V7P8              	5.85%
Bootstrap support for Q5KCQ7 as seed ortholog is 99%.
Bootstrap support for H2TML1 as seed ortholog is 100%.

Group of orthologs #951. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 T.rubripes:156

Q5KMC1              	100.00%		H2SRB0              	100.00%
Bootstrap support for Q5KMC1 as seed ortholog is 100%.
Bootstrap support for H2SRB0 as seed ortholog is 99%.

Group of orthologs #952. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:243

P0CP82              	100.00%		H2UQR6              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 99%.
Bootstrap support for H2UQR6 as seed ortholog is 100%.

Group of orthologs #953. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubripes:242

Q5K890              	100.00%		H2RX54              	100.00%
Bootstrap support for Q5K890 as seed ortholog is 100%.
Bootstrap support for H2RX54 as seed ortholog is 100%.

Group of orthologs #954. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:113

Q5KGY4              	100.00%		H2S6F4              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 99%.
Bootstrap support for H2S6F4 as seed ortholog is 99%.

Group of orthologs #955. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubripes:34

Q5KE11              	100.00%		H2TGU5              	100.00%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for H2TGU5 as seed ortholog is 97%.

Group of orthologs #956. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubripes:242

Q5KGF9              	100.00%		H2URA8              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for H2URA8 as seed ortholog is 100%.

Group of orthologs #957. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:44

Q5KEQ3              	100.00%		H2V091              	100.00%
Bootstrap support for Q5KEQ3 as seed ortholog is 99%.
Bootstrap support for H2V091 as seed ortholog is 79%.

Group of orthologs #958. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:241

Q5K7J8              	100.00%		H2V7W7              	100.00%
Bootstrap support for Q5K7J8 as seed ortholog is 95%.
Bootstrap support for H2V7W7 as seed ortholog is 100%.

Group of orthologs #959. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubripes:240

P0CM40              	100.00%		H2RYS6              	100.00%
                    	       		H2UNM9              	51.88%
Bootstrap support for P0CM40 as seed ortholog is 100%.
Bootstrap support for H2RYS6 as seed ortholog is 100%.

Group of orthologs #960. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubripes:240

Q5KNZ4              	100.00%		H2TD42              	100.00%
                    	       		H2UPM9              	30.40%
Bootstrap support for Q5KNZ4 as seed ortholog is 100%.
Bootstrap support for H2TD42 as seed ortholog is 100%.

Group of orthologs #961. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:240

Q5KMB5              	100.00%		H2TK65              	100.00%
                    	       		H2V7I9              	12.45%
Bootstrap support for Q5KMB5 as seed ortholog is 88%.
Bootstrap support for H2TK65 as seed ortholog is 100%.

Group of orthologs #962. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubripes:240

Q5KK07              	100.00%		H2UTF0              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for H2UTF0 as seed ortholog is 100%.

Group of orthologs #963. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 T.rubripes:239

Q5KHA2              	100.00%		H2S1H3              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for H2S1H3 as seed ortholog is 100%.

Group of orthologs #964. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubripes:155

Q5KBI5              	100.00%		H2T9P9              	100.00%
Bootstrap support for Q5KBI5 as seed ortholog is 95%.
Bootstrap support for H2T9P9 as seed ortholog is 100%.

Group of orthologs #965. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 T.rubripes:239

Q5KBW9              	100.00%		H2TZ30              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for H2TZ30 as seed ortholog is 100%.

Group of orthologs #966. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubripes:27

P0CQ42              	100.00%		H2V5P7              	100.00%
Bootstrap support for P0CQ42 as seed ortholog is 99%.
Bootstrap support for H2V5P7 as seed ortholog is 90%.

Group of orthologs #967. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 T.rubripes:239

Q5KGL6              	100.00%		H2UJZ6              	100.00%
Bootstrap support for Q5KGL6 as seed ortholog is 100%.
Bootstrap support for H2UJZ6 as seed ortholog is 100%.

Group of orthologs #968. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubripes:238

Q5KMM0              	100.00%		H2U4H2              	100.00%
Q5KML4              	42.75%		H2VEH4              	38.32%
                    	       		H2VEH7              	36.45%
                    	       		H2UDZ2              	28.97%
                    	       		H2SQA1              	18.69%
                    	       		Q8QGJ6              	15.89%
Bootstrap support for Q5KMM0 as seed ortholog is 97%.
Bootstrap support for H2U4H2 as seed ortholog is 100%.

Group of orthologs #969. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:7

Q5KG52              	100.00%		H2V1V2              	100.00%
                    	       		H2SKX2              	10.30%
                    	       		H2RZX5              	10.24%
Bootstrap support for Q5KG52 as seed ortholog is 99%.
Bootstrap support for H2V1V2 as seed ortholog is 56%.
Alternative seed ortholog is H2UPL8 (7 bits away from this cluster)

Group of orthologs #970. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:88

Q5K7V8              	100.00%		H2SJF0              	100.00%
                    	       		H2SEA1              	40.76%
                    	       		H2UJL2              	7.43%
Bootstrap support for Q5K7V8 as seed ortholog is 93%.
Bootstrap support for H2SJF0 as seed ortholog is 96%.

Group of orthologs #971. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:55

P0CS76              	100.00%		H2SAH6              	100.00%
                    	       		H2T4Z0              	32.19%
Bootstrap support for P0CS76 as seed ortholog is 99%.
Bootstrap support for H2SAH6 as seed ortholog is 91%.

Group of orthologs #972. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubripes:187

Q5K974              	100.00%		H2RJK8              	100.00%
Bootstrap support for Q5K974 as seed ortholog is 100%.
Bootstrap support for H2RJK8 as seed ortholog is 100%.

Group of orthologs #973. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubripes:237

Q5KEY4              	100.00%		H2TDA1              	100.00%
Bootstrap support for Q5KEY4 as seed ortholog is 100%.
Bootstrap support for H2TDA1 as seed ortholog is 100%.

Group of orthologs #974. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubripes:180

Q5KGI2              	100.00%		H2V8F8              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for H2V8F8 as seed ortholog is 99%.

Group of orthologs #975. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubripes:84

P0CS28              	100.00%		H2SCP2              	100.00%
                    	       		H2TTQ5              	31.58%
Bootstrap support for P0CS28 as seed ortholog is 100%.
Bootstrap support for H2SCP2 as seed ortholog is 97%.

Group of orthologs #976. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubripes:236

Q5KG94              	100.00%		H2UIU6              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for H2UIU6 as seed ortholog is 100%.

Group of orthologs #977. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:122

P0CS16              	100.00%		H2T7P3              	100.00%
                    	       		H2TSM2              	69.62%
Bootstrap support for P0CS16 as seed ortholog is 100%.
Bootstrap support for H2T7P3 as seed ortholog is 100%.

Group of orthologs #978. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:235

P0CP78              	100.00%		H2UT98              	100.00%
                    	       		H2TY27              	5.74%
Bootstrap support for P0CP78 as seed ortholog is 98%.
Bootstrap support for H2UT98 as seed ortholog is 100%.

Group of orthologs #979. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5KMT0              	100.00%		H2RU94              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for H2RU94 as seed ortholog is 100%.

Group of orthologs #980. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5KB12              	100.00%		H2TNI6              	100.00%
Bootstrap support for Q5KB12 as seed ortholog is 100%.
Bootstrap support for H2TNI6 as seed ortholog is 100%.

Group of orthologs #981. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5KA21              	100.00%		H2U8A7              	100.00%
Bootstrap support for Q5KA21 as seed ortholog is 100%.
Bootstrap support for H2U8A7 as seed ortholog is 100%.

Group of orthologs #982. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5KG39              	100.00%		H2TTI5              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for H2TTI5 as seed ortholog is 100%.

Group of orthologs #983. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5KJ50              	100.00%		H2TVI6              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for H2TVI6 as seed ortholog is 100%.

Group of orthologs #984. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5K9W6              	100.00%		H2UW24              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for H2UW24 as seed ortholog is 100%.

Group of orthologs #985. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:91

Q5KAD8              	100.00%		H2UXV0              	100.00%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for H2UXV0 as seed ortholog is 98%.

Group of orthologs #986. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubripes:235

Q5KLK2              	100.00%		H2U2F4              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for H2U2F4 as seed ortholog is 100%.

Group of orthologs #987. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 T.rubripes:234

Q5KFZ1              	100.00%		H2SB91              	100.00%
Bootstrap support for Q5KFZ1 as seed ortholog is 100%.
Bootstrap support for H2SB91 as seed ortholog is 100%.

Group of orthologs #988. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubripes:233

Q5KBT6              	100.00%		H2UED4              	100.00%
                    	       		H2TPJ4              	77.78%
Bootstrap support for Q5KBT6 as seed ortholog is 100%.
Bootstrap support for H2UED4 as seed ortholog is 100%.

Group of orthologs #989. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubripes:137

P40909              	100.00%		H2SBM2              	100.00%
Bootstrap support for P40909 as seed ortholog is 100%.
Bootstrap support for H2SBM2 as seed ortholog is 100%.

Group of orthologs #990. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:233

P0CQ02              	100.00%		H2SYY5              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 99%.
Bootstrap support for H2SYY5 as seed ortholog is 100%.

Group of orthologs #991. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubripes:233

Q5KDI9              	100.00%		H2SHV2              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for H2SHV2 as seed ortholog is 100%.

Group of orthologs #992. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubripes:164

Q5KKS4              	100.00%		H2SBH9              	100.00%
Bootstrap support for Q5KKS4 as seed ortholog is 100%.
Bootstrap support for H2SBH9 as seed ortholog is 100%.

Group of orthologs #993. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubripes:233

Q5K8L4              	100.00%		H2TJQ1              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for H2TJQ1 as seed ortholog is 100%.

Group of orthologs #994. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubripes:183

Q5KP95              	100.00%		H2SH48              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for H2SH48 as seed ortholog is 100%.

Group of orthologs #995. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5KML9              	100.00%		H2SIT3              	100.00%
                    	       		H2UL18              	30.51%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for H2SIT3 as seed ortholog is 100%.

Group of orthologs #996. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:232

Q5KKJ8              	100.00%		H2TGU6              	100.00%
                    	       		H2SQ52              	44.55%
Bootstrap support for Q5KKJ8 as seed ortholog is 99%.
Bootstrap support for H2TGU6 as seed ortholog is 100%.

Group of orthologs #997. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5KQ96              	100.00%		H2T476              	100.00%
                    	       		H2T735              	69.48%
Bootstrap support for Q5KQ96 as seed ortholog is 100%.
Bootstrap support for H2T476 as seed ortholog is 100%.

Group of orthologs #998. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5KA10              	100.00%		H2V970              	100.00%
                    	       		H2V789              	21.66%
Bootstrap support for Q5KA10 as seed ortholog is 100%.
Bootstrap support for H2V970 as seed ortholog is 100%.

Group of orthologs #999. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5KLA2              	100.00%		H2UQS2              	100.00%
                    	       		H2SV20              	49.00%
Bootstrap support for Q5KLA2 as seed ortholog is 100%.
Bootstrap support for H2UQS2 as seed ortholog is 100%.

Group of orthologs #1000. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:158

Q5KIB2              	100.00%		H2SI12              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for H2SI12 as seed ortholog is 99%.

Group of orthologs #1001. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5K726              	100.00%		H2U4U0              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for H2U4U0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5K7R1              	100.00%		H2VA36              	100.00%
Bootstrap support for Q5K7R1 as seed ortholog is 100%.
Bootstrap support for H2VA36 as seed ortholog is 100%.

Group of orthologs #1003. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubripes:232

Q5KMV8              	100.00%		H2UHS5              	100.00%
Bootstrap support for Q5KMV8 as seed ortholog is 100%.
Bootstrap support for H2UHS5 as seed ortholog is 100%.

Group of orthologs #1004. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubripes:231

Q5KEB3              	100.00%		H2V298              	100.00%
                    	       		H2SYI2              	30.95%
                    	       		H2V8X2              	19.84%
                    	       		H2U3R5              	19.44%
Bootstrap support for Q5KEB3 as seed ortholog is 100%.
Bootstrap support for H2V298 as seed ortholog is 100%.

Group of orthologs #1005. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubripes:231

Q5K8R7              	100.00%		H2TGH2              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for H2TGH2 as seed ortholog is 100%.

Group of orthologs #1006. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubripes:231

Q5KPS5              	100.00%		H2SU42              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for H2SU42 as seed ortholog is 100%.

Group of orthologs #1007. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubripes:231

Q5KL66              	100.00%		H2V9W9              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for H2V9W9 as seed ortholog is 100%.

Group of orthologs #1008. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubripes:230

Q5KBE8              	100.00%		H2U9F6              	100.00%
Q5KPG2              	57.53%		
Q5KLQ1              	13.29%		
Q5KE59              	9.45%		
Q5K8B7              	6.33%		
Bootstrap support for Q5KBE8 as seed ortholog is 100%.
Bootstrap support for H2U9F6 as seed ortholog is 100%.

Group of orthologs #1009. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubripes:230

Q5KL20              	100.00%		H2T2U2              	100.00%
Bootstrap support for Q5KL20 as seed ortholog is 100%.
Bootstrap support for H2T2U2 as seed ortholog is 100%.

Group of orthologs #1010. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubripes:230

Q5KPJ7              	100.00%		H2TQ46              	100.00%
Bootstrap support for Q5KPJ7 as seed ortholog is 100%.
Bootstrap support for H2TQ46 as seed ortholog is 100%.

Group of orthologs #1011. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:229

Q5KGT7              	100.00%		H2S5K2              	100.00%
Q5K9Z3              	38.57%		
Bootstrap support for Q5KGT7 as seed ortholog is 99%.
Bootstrap support for H2S5K2 as seed ortholog is 100%.

Group of orthologs #1012. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 T.rubripes:229

P0CO46              	100.00%		H2U3S9              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for H2U3S9 as seed ortholog is 100%.

Group of orthologs #1013. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubripes:112

P0CS66              	100.00%		H2RSW9              	100.00%
                    	       		H2UT64              	23.96%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for H2RSW9 as seed ortholog is 98%.

Group of orthologs #1014. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubripes:228

Q5KGM0              	100.00%		H2S7S1              	100.00%
Bootstrap support for Q5KGM0 as seed ortholog is 100%.
Bootstrap support for H2S7S1 as seed ortholog is 100%.

Group of orthologs #1015. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:161

Q5KDF7              	100.00%		H2T075              	100.00%
Bootstrap support for Q5KDF7 as seed ortholog is 99%.
Bootstrap support for H2T075 as seed ortholog is 99%.

Group of orthologs #1016. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubripes:228

Q5KK42              	100.00%		H2TCR2              	100.00%
Bootstrap support for Q5KK42 as seed ortholog is 100%.
Bootstrap support for H2TCR2 as seed ortholog is 100%.

Group of orthologs #1017. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubripes:228

Q5KAQ3              	100.00%		O57590              	100.00%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for O57590 as seed ortholog is 100%.

Group of orthologs #1018. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubripes:79

Q5KN42              	100.00%		H2UWY9              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for H2UWY9 as seed ortholog is 98%.

Group of orthologs #1019. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubripes:227

Q5KP78              	100.00%		H2TUV0              	100.00%
Q5KP94              	40.86%		H2TX93              	30.44%
Bootstrap support for Q5KP78 as seed ortholog is 100%.
Bootstrap support for H2TUV0 as seed ortholog is 100%.

Group of orthologs #1020. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubripes:227

Q5KAQ6              	100.00%		H2U2U0              	100.00%
                    	       		H2RSW2              	42.23%
Bootstrap support for Q5KAQ6 as seed ortholog is 100%.
Bootstrap support for H2U2U0 as seed ortholog is 100%.

Group of orthologs #1021. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubripes:227

Q5KDX3              	100.00%		H2THZ0              	100.00%
Bootstrap support for Q5KDX3 as seed ortholog is 100%.
Bootstrap support for H2THZ0 as seed ortholog is 100%.

Group of orthologs #1022. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubripes:227

Q5KKX2              	100.00%		H2T8I3              	100.00%
Bootstrap support for Q5KKX2 as seed ortholog is 100%.
Bootstrap support for H2T8I3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:141

Q5KBK7              	100.00%		H2UT07              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 99%.
Bootstrap support for H2UT07 as seed ortholog is 100%.

Group of orthologs #1024. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubripes:227

Q5KCJ9              	100.00%		H2V2S9              	100.00%
Bootstrap support for Q5KCJ9 as seed ortholog is 100%.
Bootstrap support for H2V2S9 as seed ortholog is 100%.

Group of orthologs #1025. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:78

Q5KBE3              	100.00%		H2VA52              	100.00%
Bootstrap support for Q5KBE3 as seed ortholog is 99%.
Bootstrap support for H2VA52 as seed ortholog is 96%.

Group of orthologs #1026. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 T.rubripes:226

Q5KA31              	100.00%		H2UDB1              	100.00%
Bootstrap support for Q5KA31 as seed ortholog is 100%.
Bootstrap support for H2UDB1 as seed ortholog is 100%.

Group of orthologs #1027. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubripes:225

Q5K8Q8              	100.00%		H2U5B4              	100.00%
                    	       		H2V8V2              	16.90%
                    	       		H2V8Q0              	6.68%
Bootstrap support for Q5K8Q8 as seed ortholog is 100%.
Bootstrap support for H2U5B4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:35 T.rubripes:225

Q5K938              	100.00%		H2SK47              	100.00%
                    	       		H2UJK8              	67.16%
Bootstrap support for Q5K938 as seed ortholog is 97%.
Bootstrap support for H2SK47 as seed ortholog is 100%.

Group of orthologs #1029. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubripes:225

Q5KAM1              	100.00%		H2SRW8              	100.00%
Bootstrap support for Q5KAM1 as seed ortholog is 99%.
Bootstrap support for H2SRW8 as seed ortholog is 100%.

Group of orthologs #1030. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubripes:157

Q5KH50              	100.00%		H2S9U0              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for H2S9U0 as seed ortholog is 99%.

Group of orthologs #1031. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubripes:225

Q5KFF7              	100.00%		H2TLY4              	100.00%
Bootstrap support for Q5KFF7 as seed ortholog is 100%.
Bootstrap support for H2TLY4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubripes:94

Q5KCK9              	100.00%		H2TY84              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for H2TY84 as seed ortholog is 99%.

Group of orthologs #1033. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubripes:225

Q5KBW6              	100.00%		P50894              	100.00%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for P50894 as seed ortholog is 100%.

Group of orthologs #1034. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:61

Q5KH94              	100.00%		H2V1H3              	40.64%
Q5KI95              	100.00%		H2V1K0              	100.00%
Q5KLM8              	5.17%		H2UYA3              	21.91%
                    	       		H2SNP4              	9.79%
Bootstrap support for Q5KH94 as seed ortholog is 97%.
Bootstrap support for Q5KI95 as seed ortholog is 96%.
Bootstrap support for H2V1K0 as seed ortholog is 95%.

Group of orthologs #1035. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:23 T.rubripes:224

Q5KGU0              	100.00%		H2RP90              	100.00%
                    	       		H2UWE3              	90.09%
Bootstrap support for Q5KGU0 as seed ortholog is 83%.
Bootstrap support for H2RP90 as seed ortholog is 100%.

Group of orthologs #1036. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubripes:224

Q5KD06              	100.00%		H2SIJ5              	100.00%
                    	       		H2TBL2              	22.20%
Bootstrap support for Q5KD06 as seed ortholog is 100%.
Bootstrap support for H2SIJ5 as seed ortholog is 100%.

Group of orthologs #1037. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubripes:224

Q5KP63              	100.00%		H2S3T3              	100.00%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for H2S3T3 as seed ortholog is 100%.

Group of orthologs #1038. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubripes:224

Q5KNG3              	100.00%		H2UCZ4              	100.00%
Bootstrap support for Q5KNG3 as seed ortholog is 100%.
Bootstrap support for H2UCZ4 as seed ortholog is 100%.

Group of orthologs #1039. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:173

Q5KHU8              	100.00%		H2SL15              	100.00%
                    	       		H2UNY6              	76.35%
                    	       		H2V9S6              	45.10%
Bootstrap support for Q5KHU8 as seed ortholog is 100%.
Bootstrap support for H2SL15 as seed ortholog is 100%.

Group of orthologs #1040. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:223

P0CN20              	100.00%		H2SH65              	100.00%
Bootstrap support for P0CN20 as seed ortholog is 100%.
Bootstrap support for H2SH65 as seed ortholog is 100%.

Group of orthologs #1041. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:223

Q5KJ08              	100.00%		H2RUJ2              	100.00%
Bootstrap support for Q5KJ08 as seed ortholog is 99%.
Bootstrap support for H2RUJ2 as seed ortholog is 100%.

Group of orthologs #1042. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:223

Q5KMR3              	100.00%		H2SLX7              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for H2SLX7 as seed ortholog is 100%.

Group of orthologs #1043. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:223

Q5KI18              	100.00%		H2TQX9              	100.00%
Bootstrap support for Q5KI18 as seed ortholog is 100%.
Bootstrap support for H2TQX9 as seed ortholog is 100%.

Group of orthologs #1044. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:223

Q5KIJ0              	100.00%		H2UMT6              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for H2UMT6 as seed ortholog is 100%.

Group of orthologs #1045. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubripes:223

Q5KNH3              	100.00%		H2VBE2              	100.00%
Bootstrap support for Q5KNH3 as seed ortholog is 100%.
Bootstrap support for H2VBE2 as seed ortholog is 100%.

Group of orthologs #1046. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubripes:222

Q5KDS9              	100.00%		H2VD11              	100.00%
                    	       		H2TJP5              	59.54%
                    	       		H2SJK7              	48.50%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for H2VD11 as seed ortholog is 100%.

Group of orthologs #1047. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubripes:222

Q5KGJ7              	100.00%		H2T0S9              	100.00%
Bootstrap support for Q5KGJ7 as seed ortholog is 100%.
Bootstrap support for H2T0S9 as seed ortholog is 100%.

Group of orthologs #1048. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:222

Q5KNW3              	100.00%		H2T4E1              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 99%.
Bootstrap support for H2T4E1 as seed ortholog is 100%.

Group of orthologs #1049. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubripes:222

Q5KFT1              	100.00%		H2UWY0              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for H2UWY0 as seed ortholog is 100%.

Group of orthologs #1050. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubripes:221

P0CS08              	100.00%		H2T538              	100.00%
Bootstrap support for P0CS08 as seed ortholog is 100%.
Bootstrap support for H2T538 as seed ortholog is 100%.

Group of orthologs #1051. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:12

Q5KI42              	100.00%		H2SS82              	100.00%
Bootstrap support for Q5KI42 as seed ortholog is 99%.
Bootstrap support for H2SS82 as seed ortholog is 64%.
Alternative seed ortholog is H2RN11 (12 bits away from this cluster)

Group of orthologs #1052. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubripes:221

Q5KJG1              	100.00%		H2T8X0              	100.00%
Bootstrap support for Q5KJG1 as seed ortholog is 100%.
Bootstrap support for H2T8X0 as seed ortholog is 100%.

Group of orthologs #1053. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubripes:166

Q5KKF8              	100.00%		H2TKK1              	100.00%
Bootstrap support for Q5KKF8 as seed ortholog is 100%.
Bootstrap support for H2TKK1 as seed ortholog is 99%.

Group of orthologs #1054. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubripes:221

Q5K7E0              	100.00%		H2UUT5              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for H2UUT5 as seed ortholog is 100%.

Group of orthologs #1055. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubripes:221

P0CO06              	100.00%		H2V8E8              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for H2V8E8 as seed ortholog is 100%.

Group of orthologs #1056. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubripes:150

Q5KJI9              	100.00%		H2V1R3              	100.00%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for H2V1R3 as seed ortholog is 99%.

Group of orthologs #1057. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:220

Q5K7M8              	100.00%		H2RTS3              	100.00%
Bootstrap support for Q5K7M8 as seed ortholog is 100%.
Bootstrap support for H2RTS3 as seed ortholog is 100%.

Group of orthologs #1058. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:220

Q5K8Y6              	100.00%		H2SRI6              	100.00%
Bootstrap support for Q5K8Y6 as seed ortholog is 100%.
Bootstrap support for H2SRI6 as seed ortholog is 100%.

Group of orthologs #1059. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:97

Q5KKY7              	100.00%		H2SHB3              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for H2SHB3 as seed ortholog is 97%.

Group of orthologs #1060. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:220

Q5KGU5              	100.00%		H2SUD4              	100.00%
Bootstrap support for Q5KGU5 as seed ortholog is 100%.
Bootstrap support for H2SUD4 as seed ortholog is 100%.

Group of orthologs #1061. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:220

Q5K7Y2              	100.00%		H2UI14              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for H2UI14 as seed ortholog is 100%.

Group of orthologs #1062. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubripes:220

Q5KMM7              	100.00%		H2TFT8              	100.00%
Bootstrap support for Q5KMM7 as seed ortholog is 100%.
Bootstrap support for H2TFT8 as seed ortholog is 100%.

Group of orthologs #1063. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubripes:219

Q5KBJ2              	100.00%		H2RNY1              	100.00%
Q5KBJ5              	44.37%		H2SG23              	46.42%
Bootstrap support for Q5KBJ2 as seed ortholog is 93%.
Bootstrap support for H2RNY1 as seed ortholog is 100%.

Group of orthologs #1064. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:85

Q5K9D1              	100.00%		H2V8F4              	100.00%
                    	       		H2V0T0              	32.89%
Bootstrap support for Q5K9D1 as seed ortholog is 96%.
Bootstrap support for H2V8F4 as seed ortholog is 98%.

Group of orthologs #1065. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:154

Q5KHX7              	100.00%		H2SAT0              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 99%.
Bootstrap support for H2SAT0 as seed ortholog is 99%.

Group of orthologs #1066. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubripes:65

Q5K793              	100.00%		H2RWJ0              	100.00%
                    	       		H2SD22              	51.43%
                    	       		H2T4K0              	25.93%
Bootstrap support for Q5K793 as seed ortholog is 100%.
Bootstrap support for H2RWJ0 as seed ortholog is 92%.

Group of orthologs #1067. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubripes:218

Q5KFP2              	100.00%		H2T133              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 100%.
Bootstrap support for H2T133 as seed ortholog is 100%.

Group of orthologs #1068. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubripes:218

Q5KP27              	100.00%		H2TNV9              	100.00%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for H2TNV9 as seed ortholog is 100%.

Group of orthologs #1069. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubripes:218

Q5KND0              	100.00%		H2TWA1              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for H2TWA1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:218

Q5KPM6              	100.00%		H2UXF8              	100.00%
Bootstrap support for Q5KPM6 as seed ortholog is 99%.
Bootstrap support for H2UXF8 as seed ortholog is 100%.

Group of orthologs #1071. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubripes:118

Q5K717              	100.00%		H2RS78              	100.00%
                    	       		H2VE75              	55.53%
Bootstrap support for Q5K717 as seed ortholog is 90%.
Bootstrap support for H2RS78 as seed ortholog is 99%.

Group of orthologs #1072. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubripes:217

Q5K9E2              	100.00%		H2SXF2              	100.00%
                    	       		H2U106              	26.06%
Bootstrap support for Q5K9E2 as seed ortholog is 100%.
Bootstrap support for H2SXF2 as seed ortholog is 100%.

Group of orthologs #1073. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:80

Q5KGE7              	100.00%		H2UZL2              	100.00%
                    	       		H2SZF5              	47.92%
Bootstrap support for Q5KGE7 as seed ortholog is 99%.
Bootstrap support for H2UZL2 as seed ortholog is 100%.

Group of orthologs #1074. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubripes:217

Q5KAE4              	100.00%		H2RW68              	100.00%
Bootstrap support for Q5KAE4 as seed ortholog is 100%.
Bootstrap support for H2RW68 as seed ortholog is 100%.

Group of orthologs #1075. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubripes:217

P0CM34              	100.00%		H2SJM3              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for H2SJM3 as seed ortholog is 100%.

Group of orthologs #1076. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:217

P0CP84              	100.00%		H2UNQ9              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 99%.
Bootstrap support for H2UNQ9 as seed ortholog is 100%.

Group of orthologs #1077. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubripes:138

Q5KFB0              	100.00%		H2V8X8              	100.00%
Bootstrap support for Q5KFB0 as seed ortholog is 100%.
Bootstrap support for H2V8X8 as seed ortholog is 99%.

Group of orthologs #1078. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubripes:217

Q5KKV3              	100.00%		H2VDX0              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for H2VDX0 as seed ortholog is 100%.

Group of orthologs #1079. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 T.rubripes:216

Q5K9V7              	100.00%		H2T4F9              	100.00%
                    	       		H2SBZ2              	28.45%
Bootstrap support for Q5K9V7 as seed ortholog is 100%.
Bootstrap support for H2T4F9 as seed ortholog is 100%.

Group of orthologs #1080. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 T.rubripes:216

Q5KC10              	100.00%		H2RLC5              	100.00%
Bootstrap support for Q5KC10 as seed ortholog is 100%.
Bootstrap support for H2RLC5 as seed ortholog is 100%.

Group of orthologs #1081. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 T.rubripes:216

Q5KM03              	100.00%		H2SAF0              	100.00%
Bootstrap support for Q5KM03 as seed ortholog is 100%.
Bootstrap support for H2SAF0 as seed ortholog is 100%.

Group of orthologs #1082. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:16 T.rubripes:216

Q5KK15              	100.00%		H2UYS8              	100.00%
Bootstrap support for Q5KK15 as seed ortholog is 65%.
Alternative seed ortholog is Q5KIX8 (16 bits away from this cluster)
Bootstrap support for H2UYS8 as seed ortholog is 100%.

Group of orthologs #1083. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubripes:215

Q5KH61              	100.00%		H2RJK4              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for H2RJK4 as seed ortholog is 100%.

Group of orthologs #1084. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:215

Q5K959              	100.00%		H2U7C4              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 100%.
Bootstrap support for H2U7C4 as seed ortholog is 100%.

Group of orthologs #1085. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubripes:215

Q5KA46              	100.00%		H2UB41              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for H2UB41 as seed ortholog is 100%.

Group of orthologs #1086. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubripes:214

Q5K7I5              	100.00%		H2T936              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for H2T936 as seed ortholog is 100%.

Group of orthologs #1087. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubripes:214

Q5KGW5              	100.00%		H2TBF3              	100.00%
Bootstrap support for Q5KGW5 as seed ortholog is 100%.
Bootstrap support for H2TBF3 as seed ortholog is 100%.

Group of orthologs #1088. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubripes:214

Q5KJJ4              	100.00%		H2USD0              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for H2USD0 as seed ortholog is 100%.

Group of orthologs #1089. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubripes:213

Q5KQ44              	100.00%		H2UD40              	100.00%
Q5KPV8              	45.72%		
Bootstrap support for Q5KQ44 as seed ortholog is 100%.
Bootstrap support for H2UD40 as seed ortholog is 100%.

Group of orthologs #1090. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubripes:152

Q5KIE9              	100.00%		H2T5U2              	100.00%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for H2T5U2 as seed ortholog is 99%.

Group of orthologs #1091. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubripes:212

Q5KBH5              	100.00%		H2S7P0              	100.00%
Bootstrap support for Q5KBH5 as seed ortholog is 100%.
Bootstrap support for H2S7P0 as seed ortholog is 100%.

Group of orthologs #1092. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:103

Q5K8L0              	100.00%		H2SQK9              	100.00%
Bootstrap support for Q5K8L0 as seed ortholog is 99%.
Bootstrap support for H2SQK9 as seed ortholog is 99%.

Group of orthologs #1093. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubripes:212

Q5KNA5              	100.00%		H2S373              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for H2S373 as seed ortholog is 100%.

Group of orthologs #1094. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubripes:212

Q5K8H7              	100.00%		H2TQT9              	100.00%
Bootstrap support for Q5K8H7 as seed ortholog is 100%.
Bootstrap support for H2TQT9 as seed ortholog is 100%.

Group of orthologs #1095. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:62

Q5KB48              	100.00%		H2UNP2              	100.00%
Bootstrap support for Q5KB48 as seed ortholog is 99%.
Bootstrap support for H2UNP2 as seed ortholog is 97%.

Group of orthologs #1096. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubripes:212

Q5KIU9              	100.00%		H2VC90              	100.00%
Bootstrap support for Q5KIU9 as seed ortholog is 100%.
Bootstrap support for H2VC90 as seed ortholog is 100%.

Group of orthologs #1097. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubripes:211

Q5KN72              	100.00%		H2TF55              	100.00%
                    	       		H2UBS2              	24.04%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for H2TF55 as seed ortholog is 100%.

Group of orthologs #1098. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubripes:211

Q5KL88              	100.00%		H2SU23              	100.00%
Bootstrap support for Q5KL88 as seed ortholog is 100%.
Bootstrap support for H2SU23 as seed ortholog is 100%.

Group of orthologs #1099. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubripes:211

Q5KDF6              	100.00%		H2VE65              	100.00%
Bootstrap support for Q5KDF6 as seed ortholog is 100%.
Bootstrap support for H2VE65 as seed ortholog is 100%.

Group of orthologs #1100. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubripes:46

Q5KA58              	100.00%		H2SJ94              	100.00%
                    	       		H2SK35              	30.67%
                    	       		H2SY01              	7.71%
                    	       		H2UR67              	7.53%
                    	       		H2RY93              	6.72%
                    	       		H2RS30              	6.44%
                    	       		H2RY52              	6.35%
                    	       		H2TA38              	5.99%
                    	       		H2U9A2              	5.17%
Bootstrap support for Q5KA58 as seed ortholog is 100%.
Bootstrap support for H2SJ94 as seed ortholog is 85%.

Group of orthologs #1101. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:77

Q5KEU0              	100.00%		H2UTP9              	100.00%
                    	       		H2SQA0              	64.58%
                    	       		H2RQ45              	63.89%
Bootstrap support for Q5KEU0 as seed ortholog is 99%.
Bootstrap support for H2UTP9 as seed ortholog is 99%.

Group of orthologs #1102. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubripes:210

Q5KNS1              	100.00%		H2V080              	100.00%
                    	       		H2S4L7              	76.10%
Bootstrap support for Q5KNS1 as seed ortholog is 100%.
Bootstrap support for H2V080 as seed ortholog is 100%.

Group of orthologs #1103. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubripes:210

Q5K9I0              	100.00%		H2S6P4              	100.00%
Bootstrap support for Q5K9I0 as seed ortholog is 100%.
Bootstrap support for H2S6P4 as seed ortholog is 100%.

Group of orthologs #1104. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubripes:210

Q5KDK4              	100.00%		H2TF85              	100.00%
Bootstrap support for Q5KDK4 as seed ortholog is 100%.
Bootstrap support for H2TF85 as seed ortholog is 100%.

Group of orthologs #1105. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubripes:210

Q5KPW7              	100.00%		H2TGD5              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for H2TGD5 as seed ortholog is 100%.

Group of orthologs #1106. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:108

Q5KGB5              	100.00%		H2UF51              	100.00%
                    	       		H2TWH1              	85.88%
Bootstrap support for Q5KGB5 as seed ortholog is 100%.
Bootstrap support for H2UF51 as seed ortholog is 100%.

Group of orthologs #1107. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubripes:209

Q5KAB6              	100.00%		H2T4F1              	100.00%
Bootstrap support for Q5KAB6 as seed ortholog is 99%.
Bootstrap support for H2T4F1 as seed ortholog is 100%.

Group of orthologs #1108. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 T.rubripes:209

Q5K8I4              	100.00%		H2TPH6              	100.00%
Bootstrap support for Q5K8I4 as seed ortholog is 100%.
Bootstrap support for H2TPH6 as seed ortholog is 100%.

Group of orthologs #1109. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:208

Q5K8S3              	100.00%		H2ULC7              	100.00%
                    	       		H2SMR5              	45.52%
                    	       		H2S070              	15.71%
                    	       		H2SF35              	12.43%
Bootstrap support for Q5K8S3 as seed ortholog is 100%.
Bootstrap support for H2ULC7 as seed ortholog is 100%.

Group of orthologs #1110. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:104

Q5K808              	100.00%		H2TLB4              	100.00%
Q5KLR5              	30.07%		
Bootstrap support for Q5K808 as seed ortholog is 100%.
Bootstrap support for H2TLB4 as seed ortholog is 99%.

Group of orthologs #1111. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:208

Q5KJ55              	100.00%		H2U9Q0              	100.00%
                    	       		H2VAZ0              	14.12%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for H2U9Q0 as seed ortholog is 100%.

Group of orthologs #1112. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:208

Q5K9U5              	100.00%		H2SCK7              	100.00%
Bootstrap support for Q5K9U5 as seed ortholog is 100%.
Bootstrap support for H2SCK7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:208

Q5KCU5              	100.00%		H2T1G9              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for H2T1G9 as seed ortholog is 100%.

Group of orthologs #1114. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubripes:208

P0CQ64              	100.00%		H2TTV5              	100.00%
Bootstrap support for P0CQ64 as seed ortholog is 100%.
Bootstrap support for H2TTV5 as seed ortholog is 100%.

Group of orthologs #1115. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:78

Q5KKS0              	100.00%		H2SVZ5              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 97%.
Bootstrap support for H2SVZ5 as seed ortholog is 96%.

Group of orthologs #1116. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:207

Q5KJD1              	100.00%		H2VC64              	100.00%
                    	       		H2TUR2              	66.27%
                    	       		H2UCT8              	47.93%
                    	       		H2TPM5              	46.32%
Bootstrap support for Q5KJD1 as seed ortholog is 92%.
Bootstrap support for H2VC64 as seed ortholog is 100%.

Group of orthologs #1117. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubripes:207

Q5K9P5              	100.00%		H2RRH7              	100.00%
                    	       		H2RLB6              	17.45%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for H2RRH7 as seed ortholog is 100%.

Group of orthologs #1118. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubripes:81

P0CM54              	100.00%		H2RPR0              	100.00%
Bootstrap support for P0CM54 as seed ortholog is 100%.
Bootstrap support for H2RPR0 as seed ortholog is 99%.

Group of orthologs #1119. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubripes:207

Q5KNF9              	100.00%		H2TQX8              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for H2TQX8 as seed ortholog is 100%.

Group of orthologs #1120. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubripes:207

Q5KIE0              	100.00%		H2UFX0              	100.00%
Bootstrap support for Q5KIE0 as seed ortholog is 100%.
Bootstrap support for H2UFX0 as seed ortholog is 100%.

Group of orthologs #1121. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubripes:3

Q5KP19              	100.00%		H2UDT8              	100.00%
Bootstrap support for Q5KP19 as seed ortholog is 100%.
Bootstrap support for H2UDT8 as seed ortholog is 43%.
Alternative seed ortholog is H2SEJ6 (3 bits away from this cluster)

Group of orthologs #1122. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:206

Q5KJC1              	100.00%		H2UMD3              	100.00%
                    	       		H2SA15              	30.07%
                    	       		H2SP04              	23.17%
                    	       		H2U6J6              	20.86%
                    	       		H2RS92              	17.48%
                    	       		H2S6T7              	16.91%
Bootstrap support for Q5KJC1 as seed ortholog is 100%.
Bootstrap support for H2UMD3 as seed ortholog is 100%.

Group of orthologs #1123. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:132

Q5K756              	100.00%		H2TRR9              	100.00%
Q5KM34              	13.45%		
Bootstrap support for Q5K756 as seed ortholog is 99%.
Bootstrap support for H2TRR9 as seed ortholog is 99%.

Group of orthologs #1124. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:206

Q5KBW8              	100.00%		H2TFP7              	100.00%
Bootstrap support for Q5KBW8 as seed ortholog is 100%.
Bootstrap support for H2TFP7 as seed ortholog is 100%.

Group of orthologs #1125. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:206

Q5KIG4              	100.00%		H2TSM1              	100.00%
Bootstrap support for Q5KIG4 as seed ortholog is 100%.
Bootstrap support for H2TSM1 as seed ortholog is 100%.

Group of orthologs #1126. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:206

Q5KLT6              	100.00%		H2TXA7              	100.00%
Bootstrap support for Q5KLT6 as seed ortholog is 100%.
Bootstrap support for H2TXA7 as seed ortholog is 100%.

Group of orthologs #1127. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubripes:206

Q5KB57              	100.00%		H2VCD3              	100.00%
Bootstrap support for Q5KB57 as seed ortholog is 100%.
Bootstrap support for H2VCD3 as seed ortholog is 100%.

Group of orthologs #1128. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5KN33              	100.00%		H2UCF5              	100.00%
                    	       		H2UMU6              	59.97%
                    	       		H2UK91              	27.13%
                    	       		H2UAJ6              	26.44%
Bootstrap support for Q5KN33 as seed ortholog is 100%.
Bootstrap support for H2UCF5 as seed ortholog is 100%.

Group of orthologs #1129. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5K6X5              	100.00%		H2TK87              	100.00%
                    	       		H2U3K9              	32.92%
                    	       		H2UQ28              	19.37%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for H2TK87 as seed ortholog is 100%.

Group of orthologs #1130. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:77

Q5KI08              	100.00%		H2S6H0              	100.00%
                    	       		H2UPZ6              	43.62%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for H2S6H0 as seed ortholog is 95%.

Group of orthologs #1131. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5KBH4              	100.00%		H2RJ01              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for H2RJ01 as seed ortholog is 100%.

Group of orthologs #1132. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5K7F0              	100.00%		H2RZM2              	100.00%
Bootstrap support for Q5K7F0 as seed ortholog is 100%.
Bootstrap support for H2RZM2 as seed ortholog is 100%.

Group of orthologs #1133. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5KAG9              	100.00%		H2S8C7              	100.00%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for H2S8C7 as seed ortholog is 100%.

Group of orthologs #1134. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5KF90              	100.00%		H2SX43              	100.00%
Bootstrap support for Q5KF90 as seed ortholog is 100%.
Bootstrap support for H2SX43 as seed ortholog is 100%.

Group of orthologs #1135. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5KP79              	100.00%		H2SYM7              	100.00%
Bootstrap support for Q5KP79 as seed ortholog is 100%.
Bootstrap support for H2SYM7 as seed ortholog is 100%.

Group of orthologs #1136. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubripes:205

Q5KPX1              	100.00%		H2UWF2              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for H2UWF2 as seed ortholog is 100%.

Group of orthologs #1137. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubripes:204

Q5KHT0              	100.00%		H2TY85              	100.00%
                    	       		H2S6Z8              	18.92%
                    	       		H2TZY2              	7.43%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for H2TY85 as seed ortholog is 100%.

Group of orthologs #1138. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:96

Q5KBA9              	100.00%		H2RUS8              	100.00%
Bootstrap support for Q5KBA9 as seed ortholog is 100%.
Bootstrap support for H2RUS8 as seed ortholog is 100%.

Group of orthologs #1139. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubripes:72

Q5KIW7              	100.00%		H2T728              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for H2T728 as seed ortholog is 99%.

Group of orthologs #1140. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubripes:157

Q5KGQ0              	100.00%		H2TPE4              	100.00%
Bootstrap support for Q5KGQ0 as seed ortholog is 100%.
Bootstrap support for H2TPE4 as seed ortholog is 100%.

Group of orthologs #1141. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubripes:204

Q5K9I2              	100.00%		H2US32              	100.00%
Bootstrap support for Q5K9I2 as seed ortholog is 100%.
Bootstrap support for H2US32 as seed ortholog is 100%.

Group of orthologs #1142. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubripes:204

Q5KPS6              	100.00%		H2UQF6              	100.00%
Bootstrap support for Q5KPS6 as seed ortholog is 100%.
Bootstrap support for H2UQF6 as seed ortholog is 100%.

Group of orthologs #1143. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

P0CM30              	100.00%		H2VBU2              	100.00%
                    	       		H2U9Z7              	28.46%
Bootstrap support for P0CM30 as seed ortholog is 100%.
Bootstrap support for H2VBU2 as seed ortholog is 100%.

Group of orthologs #1144. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

Q5KIU7              	100.00%		H2RXP3              	100.00%
Bootstrap support for Q5KIU7 as seed ortholog is 100%.
Bootstrap support for H2RXP3 as seed ortholog is 100%.

Group of orthologs #1145. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

Q5KCL9              	100.00%		H2SEZ9              	100.00%
Bootstrap support for Q5KCL9 as seed ortholog is 100%.
Bootstrap support for H2SEZ9 as seed ortholog is 100%.

Group of orthologs #1146. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

Q5KH21              	100.00%		H2SNV1              	100.00%
Bootstrap support for Q5KH21 as seed ortholog is 100%.
Bootstrap support for H2SNV1 as seed ortholog is 100%.

Group of orthologs #1147. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

Q5K741              	100.00%		H2UH34              	100.00%
Bootstrap support for Q5K741 as seed ortholog is 100%.
Bootstrap support for H2UH34 as seed ortholog is 100%.

Group of orthologs #1148. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

Q5KJJ9              	100.00%		H2THP4              	100.00%
Bootstrap support for Q5KJJ9 as seed ortholog is 100%.
Bootstrap support for H2THP4 as seed ortholog is 100%.

Group of orthologs #1149. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:203

Q5KB25              	100.00%		H2VBJ8              	100.00%
Bootstrap support for Q5KB25 as seed ortholog is 99%.
Bootstrap support for H2VBJ8 as seed ortholog is 100%.

Group of orthologs #1150. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubripes:203

Q5KF27              	100.00%		H2V8W2              	100.00%
Bootstrap support for Q5KF27 as seed ortholog is 100%.
Bootstrap support for H2V8W2 as seed ortholog is 100%.

Group of orthologs #1151. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 T.rubripes:57

Q5KFV8              	100.00%		H2RXA2              	100.00%
Bootstrap support for Q5KFV8 as seed ortholog is 100%.
Bootstrap support for H2RXA2 as seed ortholog is 97%.

Group of orthologs #1152. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:93

Q5KHY4              	100.00%		H2RXW5              	100.00%
                    	       		H2VET0              	44.81%
                    	       		H2SVV6              	6.08%
Bootstrap support for Q5KHY4 as seed ortholog is 100%.
Bootstrap support for H2RXW5 as seed ortholog is 99%.

Group of orthologs #1153. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubripes:110

Q5KNG0              	100.00%		H2S6W1              	100.00%
                    	       		H2SW45              	49.34%
                    	       		H2RU99              	24.22%
Bootstrap support for Q5KNG0 as seed ortholog is 97%.
Bootstrap support for H2S6W1 as seed ortholog is 99%.

Group of orthologs #1154. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:38

Q5KAX2              	100.00%		H2TDK0              	100.00%
Q5KG95              	11.76%		H2TUR4              	29.77%
Bootstrap support for Q5KAX2 as seed ortholog is 100%.
Bootstrap support for H2TDK0 as seed ortholog is 93%.

Group of orthologs #1155. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:201

Q5KMB8              	100.00%		H2TG08              	100.00%
                    	       		H2S612              	36.74%
                    	       		H2UEB3              	34.16%
Bootstrap support for Q5KMB8 as seed ortholog is 100%.
Bootstrap support for H2TG08 as seed ortholog is 100%.

Group of orthologs #1156. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:201

Q5KJZ6              	100.00%		H2RPQ0              	100.00%
                    	       		H2V7G2              	75.54%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for H2RPQ0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:201

Q5KGM3              	100.00%		H2T349              	100.00%
Bootstrap support for Q5KGM3 as seed ortholog is 100%.
Bootstrap support for H2T349 as seed ortholog is 100%.

Group of orthologs #1158. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:201

Q5KLE3              	100.00%		H2V4U5              	100.00%
Bootstrap support for Q5KLE3 as seed ortholog is 100%.
Bootstrap support for H2V4U5 as seed ortholog is 100%.

Group of orthologs #1159. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubripes:201

Q5KQ87              	100.00%		H2VBY4              	100.00%
Bootstrap support for Q5KQ87 as seed ortholog is 100%.
Bootstrap support for H2VBY4 as seed ortholog is 100%.

Group of orthologs #1160. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:15

Q5K8H5              	100.00%		H2RUY8              	100.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for H2RUY8 as seed ortholog is 99%.

Group of orthologs #1161. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:200

P0CN64              	100.00%		H2TL13              	100.00%
Bootstrap support for P0CN64 as seed ortholog is 100%.
Bootstrap support for H2TL13 as seed ortholog is 100%.

Group of orthologs #1162. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:200

Q5KI79              	100.00%		H2SM00              	100.00%
Bootstrap support for Q5KI79 as seed ortholog is 100%.
Bootstrap support for H2SM00 as seed ortholog is 100%.

Group of orthologs #1163. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:200

Q5KJA8              	100.00%		H2T846              	100.00%
Bootstrap support for Q5KJA8 as seed ortholog is 100%.
Bootstrap support for H2T846 as seed ortholog is 100%.

Group of orthologs #1164. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:200

Q5KHA1              	100.00%		H2TPW5              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for H2TPW5 as seed ortholog is 100%.

Group of orthologs #1165. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:200

Q5KFR3              	100.00%		H2TUW0              	100.00%
Bootstrap support for Q5KFR3 as seed ortholog is 100%.
Bootstrap support for H2TUW0 as seed ortholog is 100%.

Group of orthologs #1166. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:95

P0CO86              	100.00%		H2V1R1              	100.00%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for H2V1R1 as seed ortholog is 98%.

Group of orthologs #1167. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:200

Q5KDI6              	100.00%		H2UKJ2              	100.00%
Bootstrap support for Q5KDI6 as seed ortholog is 100%.
Bootstrap support for H2UKJ2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubripes:149

Q5KGY1              	100.00%		H2V215              	100.00%
Bootstrap support for Q5KGY1 as seed ortholog is 100%.
Bootstrap support for H2V215 as seed ortholog is 99%.

Group of orthologs #1169. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubripes:199

Q5KE33              	100.00%		H2S3M4              	100.00%
                    	       		H2UBJ0              	22.04%
Bootstrap support for Q5KE33 as seed ortholog is 100%.
Bootstrap support for H2S3M4 as seed ortholog is 100%.

Group of orthologs #1170. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:80

Q5KF50              	100.00%		H2SPE6              	100.00%
Bootstrap support for Q5KF50 as seed ortholog is 99%.
Bootstrap support for H2SPE6 as seed ortholog is 97%.

Group of orthologs #1171. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubripes:199

Q5KAI5              	100.00%		H2TM24              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for H2TM24 as seed ortholog is 100%.

Group of orthologs #1172. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:199

P0CP14              	100.00%		H2UEF2              	100.00%
Bootstrap support for P0CP14 as seed ortholog is 99%.
Bootstrap support for H2UEF2 as seed ortholog is 100%.

Group of orthologs #1173. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubripes:199

Q5KC13              	100.00%		H2U851              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for H2U851 as seed ortholog is 100%.

Group of orthologs #1174. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubripes:71

Q5KJG5              	100.00%		H2U5B2              	100.00%
Bootstrap support for Q5KJG5 as seed ortholog is 100%.
Bootstrap support for H2U5B2 as seed ortholog is 92%.

Group of orthologs #1175. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubripes:199

Q5KGM8              	100.00%		H2UYH6              	100.00%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for H2UYH6 as seed ortholog is 100%.

Group of orthologs #1176. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubripes:36

Q5K7V1              	100.00%		H2UPZ5              	100.00%
                    	       		H2USD1              	36.60%
                    	       		H2TU28              	35.09%
                    	       		H2TIP8              	32.83%
Bootstrap support for Q5K7V1 as seed ortholog is 90%.
Bootstrap support for H2UPZ5 as seed ortholog is 87%.

Group of orthologs #1177. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubripes:89

Q5KCE0              	100.00%		H2SSI2              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for H2SSI2 as seed ortholog is 98%.

Group of orthologs #1178. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubripes:198

Q5KIC5              	100.00%		H2USG6              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for H2USG6 as seed ortholog is 100%.

Group of orthologs #1179. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubripes:197

Q5KH36              	100.00%		H2SLE2              	100.00%
                    	       		H2T918              	14.68%
                    	       		H2SWN6              	11.01%
                    	       		H2SZI5              	9.68%
                    	       		H2TGM1              	7.01%
                    	       		H2RYZ9              	6.23%
                    	       		H2SN46              	5.34%
Bootstrap support for Q5KH36 as seed ortholog is 100%.
Bootstrap support for H2SLE2 as seed ortholog is 100%.

Group of orthologs #1180. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubripes:197

Q5KB11              	100.00%		H2TRP4              	100.00%
Q5KNS4              	13.08%		
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for H2TRP4 as seed ortholog is 100%.

Group of orthologs #1181. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubripes:197

Q5KG31              	100.00%		H2UTJ7              	100.00%
                    	       		H2UXM8              	21.23%
Bootstrap support for Q5KG31 as seed ortholog is 100%.
Bootstrap support for H2UTJ7 as seed ortholog is 100%.

Group of orthologs #1182. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubripes:101

Q5KEP7              	100.00%		H2UEZ2              	100.00%
Bootstrap support for Q5KEP7 as seed ortholog is 100%.
Bootstrap support for H2UEZ2 as seed ortholog is 99%.

Group of orthologs #1183. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:60

Q5KDH2              	100.00%		H2V3U1              	100.00%
Bootstrap support for Q5KDH2 as seed ortholog is 98%.
Bootstrap support for H2V3U1 as seed ortholog is 94%.

Group of orthologs #1184. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubripes:105

Q5KFX1              	100.00%		H2RTA4              	100.00%
                    	       		H2SET1              	45.87%
Bootstrap support for Q5KFX1 as seed ortholog is 100%.
Bootstrap support for H2RTA4 as seed ortholog is 95%.

Group of orthologs #1185. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubripes:196

Q5K777              	100.00%		H2RY29              	100.00%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for H2RY29 as seed ortholog is 100%.

Group of orthologs #1186. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubripes:196

Q5K9F1              	100.00%		H2SEA2              	100.00%
Bootstrap support for Q5K9F1 as seed ortholog is 100%.
Bootstrap support for H2SEA2 as seed ortholog is 100%.

Group of orthologs #1187. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:40

Q5K818              	100.00%		H2SKW3              	100.00%
Bootstrap support for Q5K818 as seed ortholog is 97%.
Bootstrap support for H2SKW3 as seed ortholog is 94%.

Group of orthologs #1188. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubripes:196

Q5KIE6              	100.00%		H2S675              	100.00%
Bootstrap support for Q5KIE6 as seed ortholog is 100%.
Bootstrap support for H2S675 as seed ortholog is 100%.

Group of orthologs #1189. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubripes:196

Q5KJX3              	100.00%		H2V9S1              	100.00%
Bootstrap support for Q5KJX3 as seed ortholog is 100%.
Bootstrap support for H2V9S1 as seed ortholog is 100%.

Group of orthologs #1190. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubripes:196

Q5KMU2              	100.00%		H2V692              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for H2V692 as seed ortholog is 100%.

Group of orthologs #1191. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:121

Q5KKH7              	100.00%		H2TSG4              	100.00%
                    	       		H2UYH7              	28.83%
Bootstrap support for Q5KKH7 as seed ortholog is 99%.
Bootstrap support for H2TSG4 as seed ortholog is 99%.

Group of orthologs #1192. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubripes:195

Q5KAB2              	100.00%		H2RRZ1              	100.00%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for H2RRZ1 as seed ortholog is 100%.

Group of orthologs #1193. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubripes:195

Q5K844              	100.00%		H2S089              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for H2S089 as seed ortholog is 100%.

Group of orthologs #1194. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubripes:195

Q5KBQ8              	100.00%		H2SUH2              	100.00%
Bootstrap support for Q5KBQ8 as seed ortholog is 100%.
Bootstrap support for H2SUH2 as seed ortholog is 100%.

Group of orthologs #1195. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:113

Q5KIX3              	100.00%		H2SQ69              	100.00%
Bootstrap support for Q5KIX3 as seed ortholog is 89%.
Bootstrap support for H2SQ69 as seed ortholog is 99%.

Group of orthologs #1196. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubripes:195

Q5K7S4              	100.00%		H2ULV1              	100.00%
Bootstrap support for Q5K7S4 as seed ortholog is 100%.
Bootstrap support for H2ULV1 as seed ortholog is 100%.

Group of orthologs #1197. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubripes:195

Q5KG23              	100.00%		H2UQJ5              	100.00%
Bootstrap support for Q5KG23 as seed ortholog is 100%.
Bootstrap support for H2UQJ5 as seed ortholog is 100%.

Group of orthologs #1198. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubripes:195

Q5KM60              	100.00%		H2URE4              	100.00%
Bootstrap support for Q5KM60 as seed ortholog is 100%.
Bootstrap support for H2URE4 as seed ortholog is 100%.

Group of orthologs #1199. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:194

Q5KED8              	100.00%		H2SS94              	100.00%
Bootstrap support for Q5KED8 as seed ortholog is 100%.
Bootstrap support for H2SS94 as seed ortholog is 100%.

Group of orthologs #1200. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:194

Q5K9Z8              	100.00%		H2TA57              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 100%.
Bootstrap support for H2TA57 as seed ortholog is 100%.

Group of orthologs #1201. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:81

Q5KKN5              	100.00%		H2UTK3              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for H2UTK3 as seed ortholog is 99%.

Group of orthologs #1202. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubripes:194

Q5KIZ3              	100.00%		H2V023              	100.00%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for H2V023 as seed ortholog is 100%.

Group of orthologs #1203. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:28

P0CN98              	100.00%		H2RS72              	100.00%
                    	       		H2RX60              	100.00%
                    	       		H2T5P7              	100.00%
                    	       		H2S4Z7              	98.33%
                    	       		H2S4E9              	91.67%
                    	       		H2TEC2              	83.33%
                    	       		H2U0D0              	83.33%
                    	       		H2SBN3              	78.33%
                    	       		H2URW2              	78.33%
                    	       		H2URL3              	77.03%
                    	       		H2SJ65              	75.00%
                    	       		H2UZU2              	71.67%
                    	       		H2URJ0              	71.67%
                    	       		H2RXI2              	68.33%
Bootstrap support for P0CN98 as seed ortholog is 100%.
Bootstrap support for H2RS72 as seed ortholog is 96%.
Bootstrap support for H2RX60 as seed ortholog is 95%.
Bootstrap support for H2T5P7 as seed ortholog is 97%.

Group of orthologs #1204. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:193

Q5KDT2              	100.00%		H2RZR4              	100.00%
                    	       		H2TBD9              	47.03%
                    	       		H2TS81              	39.41%
                    	       		H2TJX9              	13.05%
                    	       		H2UI90              	9.43%
Bootstrap support for Q5KDT2 as seed ortholog is 100%.
Bootstrap support for H2RZR4 as seed ortholog is 100%.

Group of orthologs #1205. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:37

Q5KIL7              	100.00%		H2SQ06              	100.00%
                    	       		H2SP52              	30.80%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for H2SQ06 as seed ortholog is 87%.

Group of orthologs #1206. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:193

Q5KBT5              	100.00%		H2TJC0              	100.00%
                    	       		H2SS13              	66.58%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for H2TJC0 as seed ortholog is 100%.

Group of orthologs #1207. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:136

P0CS30              	100.00%		H2RRC9              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 100%.
Bootstrap support for H2RRC9 as seed ortholog is 99%.

Group of orthologs #1208. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:193

Q5KMZ6              	100.00%		H2RUJ5              	100.00%
Bootstrap support for Q5KMZ6 as seed ortholog is 100%.
Bootstrap support for H2RUJ5 as seed ortholog is 100%.

Group of orthologs #1209. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:18 T.rubripes:38

Q5KD66              	100.00%		H2UD72              	100.00%
Bootstrap support for Q5KD66 as seed ortholog is 67%.
Alternative seed ortholog is Q5KJH5 (18 bits away from this cluster)
Bootstrap support for H2UD72 as seed ortholog is 83%.

Group of orthologs #1210. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubripes:193

Q5KNH2              	100.00%		H2UH24              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for H2UH24 as seed ortholog is 100%.

Group of orthologs #1211. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:34 T.rubripes:40

Q5KGR6              	100.00%		H2SQ34              	100.00%
                    	       		H2RP06              	17.19%
                    	       		H2SGD2              	12.50%
Bootstrap support for Q5KGR6 as seed ortholog is 95%.
Bootstrap support for H2SQ34 as seed ortholog is 96%.

Group of orthologs #1212. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:192

Q5KIZ8              	100.00%		H2S4Y6              	100.00%
                    	       		H2UEV1              	7.96%
Bootstrap support for Q5KIZ8 as seed ortholog is 99%.
Bootstrap support for H2S4Y6 as seed ortholog is 100%.

Group of orthologs #1213. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:14 T.rubripes:192

Q5K7Y0              	100.00%		H2SQE7              	100.00%
Bootstrap support for Q5K7Y0 as seed ortholog is 55%.
Alternative seed ortholog is Q5K918 (14 bits away from this cluster)
Bootstrap support for H2SQE7 as seed ortholog is 100%.

Group of orthologs #1214. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubripes:138

Q5KJP6              	100.00%		H2SGN1              	100.00%
Bootstrap support for Q5KJP6 as seed ortholog is 100%.
Bootstrap support for H2SGN1 as seed ortholog is 99%.

Group of orthologs #1215. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubripes:192

Q5KHZ3              	100.00%		H2SZG5              	100.00%
Bootstrap support for Q5KHZ3 as seed ortholog is 100%.
Bootstrap support for H2SZG5 as seed ortholog is 100%.

Group of orthologs #1216. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubripes:192

Q5KK13              	100.00%		H2TXQ6              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for H2TXQ6 as seed ortholog is 100%.

Group of orthologs #1217. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubripes:192

Q5KIE7              	100.00%		H2V866              	100.00%
Bootstrap support for Q5KIE7 as seed ortholog is 100%.
Bootstrap support for H2V866 as seed ortholog is 100%.

Group of orthologs #1218. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:109

Q5KPC4              	100.00%		H2THP1              	100.00%
                    	       		H2VDC7              	26.16%
Bootstrap support for Q5KPC4 as seed ortholog is 100%.
Bootstrap support for H2THP1 as seed ortholog is 99%.

Group of orthologs #1219. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

P0CR48              	100.00%		H2SK95              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for H2SK95 as seed ortholog is 100%.

Group of orthologs #1220. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

Q5KGZ7              	100.00%		H2SX63              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for H2SX63 as seed ortholog is 100%.

Group of orthologs #1221. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:122

Q5KAU2              	100.00%		H2TIZ8              	100.00%
Bootstrap support for Q5KAU2 as seed ortholog is 99%.
Bootstrap support for H2TIZ8 as seed ortholog is 100%.

Group of orthologs #1222. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:77

Q5K720              	100.00%		H2U198              	100.00%
Bootstrap support for Q5K720 as seed ortholog is 100%.
Bootstrap support for H2U198 as seed ortholog is 99%.

Group of orthologs #1223. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

Q5KN16              	100.00%		H2T5K0              	100.00%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for H2T5K0 as seed ortholog is 100%.

Group of orthologs #1224. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

Q5KMB9              	100.00%		H2TFQ5              	100.00%
Bootstrap support for Q5KMB9 as seed ortholog is 100%.
Bootstrap support for H2TFQ5 as seed ortholog is 100%.

Group of orthologs #1225. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

Q5KEQ0              	100.00%		H2UQX0              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for H2UQX0 as seed ortholog is 100%.

Group of orthologs #1226. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

Q5K6Z0              	100.00%		H2VEX5              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for H2VEX5 as seed ortholog is 100%.

Group of orthologs #1227. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubripes:191

Q5KM21              	100.00%		H2V1X5              	100.00%
Bootstrap support for Q5KM21 as seed ortholog is 100%.
Bootstrap support for H2V1X5 as seed ortholog is 100%.

Group of orthologs #1228. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubripes:34

Q5KLA9              	100.00%		H2V875              	100.00%
                    	       		H2UDZ4              	32.10%
                    	       		H2RZ67              	32.02%
Bootstrap support for Q5KLA9 as seed ortholog is 100%.
Bootstrap support for H2V875 as seed ortholog is 75%.

Group of orthologs #1229. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubripes:190

Q5K979              	100.00%		H2U053              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for H2U053 as seed ortholog is 100%.

Group of orthologs #1230. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:190

Q5KH86              	100.00%		H2UGW8              	100.00%
Bootstrap support for Q5KH86 as seed ortholog is 88%.
Bootstrap support for H2UGW8 as seed ortholog is 100%.

Group of orthologs #1231. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubripes:190

Q5KF34              	100.00%		H2UXX3              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for H2UXX3 as seed ortholog is 100%.

Group of orthologs #1232. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubripes:189

Q5KNK4              	100.00%		H2TUH7              	100.00%
Bootstrap support for Q5KNK4 as seed ortholog is 100%.
Bootstrap support for H2TUH7 as seed ortholog is 100%.

Group of orthologs #1233. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:49

Q5KJ96              	100.00%		H2S641              	100.00%
                    	       		H2UMC5              	24.29%
                    	       		H2TVT4              	14.57%
Bootstrap support for Q5KJ96 as seed ortholog is 99%.
Bootstrap support for H2S641 as seed ortholog is 89%.

Group of orthologs #1234. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:32

Q5KJE5              	100.00%		H2TSS3              	100.00%
                    	       		H2TJJ0              	42.68%
                    	       		H2U3M7              	10.38%
Bootstrap support for Q5KJE5 as seed ortholog is 100%.
Bootstrap support for H2TSS3 as seed ortholog is 69%.
Alternative seed ortholog is H2VEE8 (32 bits away from this cluster)

Group of orthologs #1235. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:49

Q5KPB8              	100.00%		H2UHP7              	100.00%
                    	       		H2TAC9              	39.17%
Bootstrap support for Q5KPB8 as seed ortholog is 100%.
Bootstrap support for H2UHP7 as seed ortholog is 83%.

Group of orthologs #1236. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:188

Q5KHZ6              	100.00%		H2S053              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for H2S053 as seed ortholog is 100%.

Group of orthologs #1237. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:88

Q5KFG5              	100.00%		H2SYT0              	100.00%
Bootstrap support for Q5KFG5 as seed ortholog is 99%.
Bootstrap support for H2SYT0 as seed ortholog is 99%.

Group of orthologs #1238. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:188

Q5KKQ0              	100.00%		H2TLD2              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for H2TLD2 as seed ortholog is 100%.

Group of orthologs #1239. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubripes:188

Q5KLH8              	100.00%		H2TW20              	100.00%
Bootstrap support for Q5KLH8 as seed ortholog is 100%.
Bootstrap support for H2TW20 as seed ortholog is 100%.

Group of orthologs #1240. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:74

Q5KGB2              	100.00%		Q9W6R0              	100.00%
                    	       		H2U418              	88.28%
                    	       		H2SHX3              	67.19%
                    	       		H2UDA9              	31.25%
Bootstrap support for Q5KGB2 as seed ortholog is 100%.
Bootstrap support for Q9W6R0 as seed ortholog is 99%.

Group of orthologs #1241. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubripes:115

Q5KI63              	100.00%		H2T7B2              	100.00%
                    	       		H2T5R5              	45.54%
Bootstrap support for Q5KI63 as seed ortholog is 89%.
Bootstrap support for H2T7B2 as seed ortholog is 98%.

Group of orthologs #1242. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:187

Q5KB37              	100.00%		H2SXA5              	100.00%
Bootstrap support for Q5KB37 as seed ortholog is 100%.
Bootstrap support for H2SXA5 as seed ortholog is 100%.

Group of orthologs #1243. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:187

Q5KLT5              	100.00%		H2SD88              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 100%.
Bootstrap support for H2SD88 as seed ortholog is 100%.

Group of orthologs #1244. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:131

Q5KKX5              	100.00%		H2TMN1              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for H2TMN1 as seed ortholog is 100%.

Group of orthologs #1245. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:187

P0CQ52              	100.00%		H2V135              	100.00%
Bootstrap support for P0CQ52 as seed ortholog is 100%.
Bootstrap support for H2V135 as seed ortholog is 100%.

Group of orthologs #1246. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubripes:187

Q5KQ40              	100.00%		H2UBX7              	100.00%
Bootstrap support for Q5KQ40 as seed ortholog is 100%.
Bootstrap support for H2UBX7 as seed ortholog is 100%.

Group of orthologs #1247. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KPB3              	100.00%		H2SKV7              	100.00%
                    	       		H2V6I7              	35.83%
                    	       		H2U2L1              	32.14%
                    	       		H2T2J6              	25.67%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for H2SKV7 as seed ortholog is 100%.

Group of orthologs #1248. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KD00              	100.00%		H2U641              	100.00%
                    	       		H2RKP7              	57.04%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for H2U641 as seed ortholog is 100%.

Group of orthologs #1249. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:32

Q5KD12              	100.00%		H2VEJ4              	100.00%
                    	       		H2TGC3              	5.71%
Bootstrap support for Q5KD12 as seed ortholog is 100%.
Bootstrap support for H2VEJ4 as seed ortholog is 95%.

Group of orthologs #1250. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:104

Q5KI70              	100.00%		H2S8M4              	100.00%
Bootstrap support for Q5KI70 as seed ortholog is 99%.
Bootstrap support for H2S8M4 as seed ortholog is 100%.

Group of orthologs #1251. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:63

Q5KJM4              	100.00%		H2S5N4              	100.00%
Bootstrap support for Q5KJM4 as seed ortholog is 100%.
Bootstrap support for H2S5N4 as seed ortholog is 95%.

Group of orthologs #1252. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:130

Q5KNK6              	100.00%		H2S678              	100.00%
Bootstrap support for Q5KNK6 as seed ortholog is 98%.
Bootstrap support for H2S678 as seed ortholog is 99%.

Group of orthologs #1253. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KMU1              	100.00%		H2SJV6              	100.00%
Bootstrap support for Q5KMU1 as seed ortholog is 100%.
Bootstrap support for H2SJV6 as seed ortholog is 100%.

Group of orthologs #1254. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:7

Q5K8L7              	100.00%		H2UDU3              	100.00%
Bootstrap support for Q5K8L7 as seed ortholog is 100%.
Bootstrap support for H2UDU3 as seed ortholog is 95%.

Group of orthologs #1255. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KPT7              	100.00%		H2TIZ6              	100.00%
Bootstrap support for Q5KPT7 as seed ortholog is 100%.
Bootstrap support for H2TIZ6 as seed ortholog is 100%.

Group of orthologs #1256. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KF20              	100.00%		H2UJE5              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 100%.
Bootstrap support for H2UJE5 as seed ortholog is 100%.

Group of orthologs #1257. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5K7W8              	100.00%		H2V724              	100.00%
Bootstrap support for Q5K7W8 as seed ortholog is 100%.
Bootstrap support for H2V724 as seed ortholog is 100%.

Group of orthologs #1258. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KM68              	100.00%		H2UAH8              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for H2UAH8 as seed ortholog is 100%.

Group of orthologs #1259. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KF53              	100.00%		H2V321              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for H2V321 as seed ortholog is 100%.

Group of orthologs #1260. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubripes:186

Q5KDF8              	100.00%		H2VD64              	100.00%
Bootstrap support for Q5KDF8 as seed ortholog is 100%.
Bootstrap support for H2VD64 as seed ortholog is 100%.

Group of orthologs #1261. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KI93              	100.00%		H2RJH7              	100.00%
                    	       		H2RSL5              	40.42%
                    	       		H2RVD1              	37.25%
                    	       		H2SFM7              	29.95%
                    	       		H2RR29              	28.78%
                    	       		H2RQF9              	27.41%
                    	       		H2RKF4              	25.08%
                    	       		H2S573              	24.97%
                    	       		H2RPT9              	24.66%
                    	       		H2V405              	22.12%
                    	       		H2VAB4              	12.28%
Bootstrap support for Q5KI93 as seed ortholog is 100%.
Bootstrap support for H2RJH7 as seed ortholog is 100%.

Group of orthologs #1262. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:99

Q5K8F4              	100.00%		H2SGJ0              	100.00%
                    	       		H2UED3              	13.58%
Bootstrap support for Q5K8F4 as seed ortholog is 99%.
Bootstrap support for H2SGJ0 as seed ortholog is 99%.

Group of orthologs #1263. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KJ49              	100.00%		H2SCT1              	100.00%
Bootstrap support for Q5KJ49 as seed ortholog is 100%.
Bootstrap support for H2SCT1 as seed ortholog is 100%.

Group of orthologs #1264. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:185

Q5KGC9              	100.00%		H2TVD6              	100.00%
Bootstrap support for Q5KGC9 as seed ortholog is 99%.
Bootstrap support for H2TVD6 as seed ortholog is 100%.

Group of orthologs #1265. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:185

Q5KJW9              	100.00%		H2TKU4              	100.00%
Bootstrap support for Q5KJW9 as seed ortholog is 94%.
Bootstrap support for H2TKU4 as seed ortholog is 100%.

Group of orthologs #1266. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KMA0              	100.00%		H2TF36              	100.00%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for H2TF36 as seed ortholog is 100%.

Group of orthologs #1267. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KQ70              	100.00%		H2TEV3              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for H2TEV3 as seed ortholog is 100%.

Group of orthologs #1268. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KKD1              	100.00%		H2TXT2              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for H2TXT2 as seed ortholog is 100%.

Group of orthologs #1269. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KEZ9              	100.00%		H2VDU0              	100.00%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for H2VDU0 as seed ortholog is 100%.

Group of orthologs #1270. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubripes:185

Q5KL89              	100.00%		H2V3G3              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for H2V3G3 as seed ortholog is 100%.

Group of orthologs #1271. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubripes:106

Q5K6W9              	100.00%		H2UAC2              	100.00%
Bootstrap support for Q5K6W9 as seed ortholog is 100%.
Bootstrap support for H2UAC2 as seed ortholog is 99%.

Group of orthologs #1272. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:183

Q5KAZ2              	100.00%		H2RRK4              	100.00%
                    	       		H2V018              	26.76%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for H2RRK4 as seed ortholog is 100%.

Group of orthologs #1273. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:183

Q5KJJ7              	100.00%		H2THQ7              	100.00%
                    	       		H2RTQ7              	34.26%
Bootstrap support for Q5KJJ7 as seed ortholog is 100%.
Bootstrap support for H2THQ7 as seed ortholog is 100%.

Group of orthologs #1274. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:183

Q5K8I0              	100.00%		H2RTV7              	100.00%
Bootstrap support for Q5K8I0 as seed ortholog is 100%.
Bootstrap support for H2RTV7 as seed ortholog is 100%.

Group of orthologs #1275. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:183

Q5KIT3              	100.00%		H2SPQ4              	100.00%
Bootstrap support for Q5KIT3 as seed ortholog is 100%.
Bootstrap support for H2SPQ4 as seed ortholog is 100%.

Group of orthologs #1276. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubripes:183

Q5KAJ9              	100.00%		H2TXY8              	100.00%
Bootstrap support for Q5KAJ9 as seed ortholog is 100%.
Bootstrap support for H2TXY8 as seed ortholog is 100%.

Group of orthologs #1277. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubripes:182

Q5KLR2              	100.00%		H2V259              	100.00%
Q5KLQ4              	53.17%		H2V0P2              	20.27%
Bootstrap support for Q5KLR2 as seed ortholog is 100%.
Bootstrap support for H2V259 as seed ortholog is 100%.

Group of orthologs #1278. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:181

Q5KHL4              	100.00%		H2U9W1              	100.00%
                    	       		H2SQX0              	92.23%
                    	       		H2TID7              	87.89%
Bootstrap support for Q5KHL4 as seed ortholog is 99%.
Bootstrap support for H2U9W1 as seed ortholog is 100%.

Group of orthologs #1279. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubripes:181

Q5KFF3              	100.00%		H2RYC8              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for H2RYC8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubripes:181

Q5K6Y5              	100.00%		H2SWT3              	100.00%
Bootstrap support for Q5K6Y5 as seed ortholog is 100%.
Bootstrap support for H2SWT3 as seed ortholog is 100%.

Group of orthologs #1281. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubripes:181

Q5KKW5              	100.00%		H2S7E4              	100.00%
Bootstrap support for Q5KKW5 as seed ortholog is 100%.
Bootstrap support for H2S7E4 as seed ortholog is 100%.

Group of orthologs #1282. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubripes:181

Q5KKH3              	100.00%		H2T0V8              	100.00%
Bootstrap support for Q5KKH3 as seed ortholog is 100%.
Bootstrap support for H2T0V8 as seed ortholog is 100%.

Group of orthologs #1283. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubripes:181

Q5KEX8              	100.00%		H2TID9              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for H2TID9 as seed ortholog is 100%.

Group of orthologs #1284. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubripes:181

Q5KPF9              	100.00%		H2U7H5              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for H2U7H5 as seed ortholog is 100%.

Group of orthologs #1285. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubripes:180

Q5KBY8              	100.00%		H2UXU0              	100.00%
                    	       		H2RIX9              	63.92%
                    	       		H2T857              	7.01%
Bootstrap support for Q5KBY8 as seed ortholog is 100%.
Bootstrap support for H2UXU0 as seed ortholog is 100%.

Group of orthologs #1286. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:49

Q5KCL3              	100.00%		H2SVQ6              	100.00%
                    	       		H2SCD5              	48.42%
Bootstrap support for Q5KCL3 as seed ortholog is 90%.
Bootstrap support for H2SVQ6 as seed ortholog is 92%.

Group of orthologs #1287. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubripes:179

Q5KAX8              	100.00%		H2S549              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for H2S549 as seed ortholog is 100%.

Group of orthologs #1288. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubripes:179

Q5KE34              	100.00%		H2TQM3              	100.00%
Bootstrap support for Q5KE34 as seed ortholog is 100%.
Bootstrap support for H2TQM3 as seed ortholog is 100%.

Group of orthologs #1289. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubripes:179

Q5KMJ7              	100.00%		H2TRE7              	100.00%
Bootstrap support for Q5KMJ7 as seed ortholog is 100%.
Bootstrap support for H2TRE7 as seed ortholog is 100%.

Group of orthologs #1290. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubripes:179

Q5KNS3              	100.00%		H2UD61              	100.00%
Bootstrap support for Q5KNS3 as seed ortholog is 100%.
Bootstrap support for H2UD61 as seed ortholog is 100%.

Group of orthologs #1291. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubripes:179

Q5KPE9              	100.00%		H2UN50              	100.00%
Bootstrap support for Q5KPE9 as seed ortholog is 100%.
Bootstrap support for H2UN50 as seed ortholog is 100%.

Group of orthologs #1292. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

Q5KBY9              	100.00%		H2TLU9              	100.00%
                    	       		H2SHM5              	15.83%
Bootstrap support for Q5KBY9 as seed ortholog is 100%.
Bootstrap support for H2TLU9 as seed ortholog is 100%.

Group of orthologs #1293. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

P0CQ50              	100.00%		P61486              	100.00%
                    	       		H2U0Z1              	95.74%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for P61486 as seed ortholog is 100%.

Group of orthologs #1294. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

Q5K850              	100.00%		H2RRU4              	100.00%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for H2RRU4 as seed ortholog is 100%.

Group of orthologs #1295. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

Q5KKD0              	100.00%		H2RRX7              	100.00%
Bootstrap support for Q5KKD0 as seed ortholog is 100%.
Bootstrap support for H2RRX7 as seed ortholog is 100%.

Group of orthologs #1296. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

Q5KGV9              	100.00%		H2SIC8              	100.00%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for H2SIC8 as seed ortholog is 100%.

Group of orthologs #1297. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:52

Q5KAU6              	100.00%		H2TFC9              	100.00%
Bootstrap support for Q5KAU6 as seed ortholog is 100%.
Bootstrap support for H2TFC9 as seed ortholog is 99%.

Group of orthologs #1298. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

Q5KBS5              	100.00%		H2ULE5              	100.00%
Bootstrap support for Q5KBS5 as seed ortholog is 100%.
Bootstrap support for H2ULE5 as seed ortholog is 100%.

Group of orthologs #1299. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:102

Q5KM53              	100.00%		H2V3U8              	100.00%
Bootstrap support for Q5KM53 as seed ortholog is 99%.
Bootstrap support for H2V3U8 as seed ortholog is 99%.

Group of orthologs #1300. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:96

Q5KPF3              	100.00%		H2UZ08              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for H2UZ08 as seed ortholog is 99%.

Group of orthologs #1301. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubripes:178

Q5KN51              	100.00%		H2VBT9              	100.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for H2VBT9 as seed ortholog is 100%.

Group of orthologs #1302. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:98

Q5KDR7              	100.00%		H2SYX5              	100.00%
Bootstrap support for Q5KDR7 as seed ortholog is 99%.
Bootstrap support for H2SYX5 as seed ortholog is 99%.

Group of orthologs #1303. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubripes:177

Q5KH26              	100.00%		H2UYZ2              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for H2UYZ2 as seed ortholog is 100%.

Group of orthologs #1304. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5KA56              	100.00%		H2U5R3              	100.00%
                    	       		H2S131              	68.21%
                    	       		H2VAY7              	38.95%
                    	       		H2UDF3              	8.21%
Bootstrap support for Q5KA56 as seed ortholog is 100%.
Bootstrap support for H2U5R3 as seed ortholog is 100%.

Group of orthologs #1305. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5KJP2              	100.00%		H2S4X6              	100.00%
                    	       		H2T2M0              	69.41%
                    	       		H2UYB4              	65.18%
Bootstrap support for Q5KJP2 as seed ortholog is 100%.
Bootstrap support for H2S4X6 as seed ortholog is 100%.

Group of orthologs #1306. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubripes:30

Q5K9E7              	100.00%		H2VAF0              	100.00%
Q5KEY5              	11.14%		H2RN50              	35.61%
Bootstrap support for Q5K9E7 as seed ortholog is 87%.
Bootstrap support for H2VAF0 as seed ortholog is 73%.
Alternative seed ortholog is H2URV5 (30 bits away from this cluster)

Group of orthologs #1307. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5K9T5              	100.00%		H2SE94              	100.00%
                    	       		H2V4A1              	23.22%
Bootstrap support for Q5K9T5 as seed ortholog is 100%.
Bootstrap support for H2SE94 as seed ortholog is 100%.

Group of orthologs #1308. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5K9S4              	100.00%		H2RKB0              	100.00%
Bootstrap support for Q5K9S4 as seed ortholog is 100%.
Bootstrap support for H2RKB0 as seed ortholog is 100%.

Group of orthologs #1309. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5KCY7              	100.00%		H2SJR9              	100.00%
Bootstrap support for Q5KCY7 as seed ortholog is 100%.
Bootstrap support for H2SJR9 as seed ortholog is 100%.

Group of orthologs #1310. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:108

Q5KK51              	100.00%		H2TH36              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for H2TH36 as seed ortholog is 99%.

Group of orthologs #1311. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:77

Q5KP11              	100.00%		H2T744              	100.00%
Bootstrap support for Q5KP11 as seed ortholog is 100%.
Bootstrap support for H2T744 as seed ortholog is 81%.

Group of orthologs #1312. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5KK68              	100.00%		H2UDD0              	100.00%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for H2UDD0 as seed ortholog is 100%.

Group of orthologs #1313. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5KJN1              	100.00%		H2UVM9              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for H2UVM9 as seed ortholog is 100%.

Group of orthologs #1314. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubripes:176

Q5KL68              	100.00%		H2VA07              	100.00%
Bootstrap support for Q5KL68 as seed ortholog is 100%.
Bootstrap support for H2VA07 as seed ortholog is 100%.

Group of orthologs #1315. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:175

Q5KK08              	100.00%		H2TXV0              	100.00%
Q5KBZ2              	37.69%		H2RNB0              	13.24%
                    	       		H2SLT9              	13.00%
Bootstrap support for Q5KK08 as seed ortholog is 94%.
Bootstrap support for H2TXV0 as seed ortholog is 100%.

Group of orthologs #1316. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubripes:73

P0CL94              	100.00%		H2T0D9              	100.00%
                    	       		H2SAD8              	16.39%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for H2T0D9 as seed ortholog is 98%.

Group of orthologs #1317. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubripes:175

P0CO62              	100.00%		H2UIT4              	100.00%
                    	       		H2UWC3              	30.06%
Bootstrap support for P0CO62 as seed ortholog is 100%.
Bootstrap support for H2UIT4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:74

Q5KES1              	100.00%		H2UJ37              	100.00%
                    	       		H2TU25              	18.81%
Bootstrap support for Q5KES1 as seed ortholog is 98%.
Bootstrap support for H2UJ37 as seed ortholog is 96%.

Group of orthologs #1319. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubripes:94

Q5KL10              	100.00%		H2RYT9              	100.00%
Bootstrap support for Q5KL10 as seed ortholog is 100%.
Bootstrap support for H2RYT9 as seed ortholog is 99%.

Group of orthologs #1320. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubripes:175

Q5K710              	100.00%		H2TV83              	100.00%
Bootstrap support for Q5K710 as seed ortholog is 100%.
Bootstrap support for H2TV83 as seed ortholog is 100%.

Group of orthologs #1321. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubripes:175

Q5KGQ8              	100.00%		H2THT4              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for H2THT4 as seed ortholog is 100%.

Group of orthologs #1322. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubripes:175

P0CM82              	100.00%		H2VF11              	100.00%
Bootstrap support for P0CM82 as seed ortholog is 100%.
Bootstrap support for H2VF11 as seed ortholog is 100%.

Group of orthologs #1323. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubripes:61

P0CO00              	100.00%		H2UVK6              	100.00%
                    	       		H2RUW8              	88.00%
Bootstrap support for P0CO00 as seed ortholog is 100%.
Bootstrap support for H2UVK6 as seed ortholog is 99%.

Group of orthologs #1324. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubripes:98

P0CQ06              	100.00%		H2SDL0              	100.00%
Bootstrap support for P0CQ06 as seed ortholog is 100%.
Bootstrap support for H2SDL0 as seed ortholog is 97%.

Group of orthologs #1325. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubripes:174

Q5KCI8              	100.00%		H2SXU5              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for H2SXU5 as seed ortholog is 100%.

Group of orthologs #1326. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:173

Q5K7T3              	100.00%		H2S289              	100.00%
Bootstrap support for Q5K7T3 as seed ortholog is 100%.
Bootstrap support for H2S289 as seed ortholog is 100%.

Group of orthologs #1327. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:173

P0CQ44              	100.00%		H2U9P3              	100.00%
Bootstrap support for P0CQ44 as seed ortholog is 100%.
Bootstrap support for H2U9P3 as seed ortholog is 100%.

Group of orthologs #1328. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:173

Q5KN77              	100.00%		H2TA34              	100.00%
Bootstrap support for Q5KN77 as seed ortholog is 100%.
Bootstrap support for H2TA34 as seed ortholog is 100%.

Group of orthologs #1329. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:173

Q5KAJ6              	100.00%		H2UDT6              	100.00%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for H2UDT6 as seed ortholog is 100%.

Group of orthologs #1330. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:173

Q5KF11              	100.00%		H2UAY5              	100.00%
Bootstrap support for Q5KF11 as seed ortholog is 100%.
Bootstrap support for H2UAY5 as seed ortholog is 100%.

Group of orthologs #1331. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubripes:173

Q5KFN9              	100.00%		H2U935              	100.00%
Bootstrap support for Q5KFN9 as seed ortholog is 100%.
Bootstrap support for H2U935 as seed ortholog is 100%.

Group of orthologs #1332. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubripes:172

Q5KD38              	100.00%		H2T645              	100.00%
                    	       		H2U665              	36.36%
Bootstrap support for Q5KD38 as seed ortholog is 100%.
Bootstrap support for H2T645 as seed ortholog is 100%.

Group of orthologs #1333. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:172

P0CS40              	100.00%		H2RM45              	100.00%
Bootstrap support for P0CS40 as seed ortholog is 99%.
Bootstrap support for H2RM45 as seed ortholog is 100%.

Group of orthologs #1334. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubripes:171

Q5K8W6              	100.00%		H2STT6              	100.00%
                    	       		H2TKQ6              	72.35%
Bootstrap support for Q5K8W6 as seed ortholog is 100%.
Bootstrap support for H2STT6 as seed ortholog is 100%.

Group of orthologs #1335. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:171

Q5KGV6              	100.00%		H2RRC6              	100.00%
Bootstrap support for Q5KGV6 as seed ortholog is 99%.
Bootstrap support for H2RRC6 as seed ortholog is 100%.

Group of orthologs #1336. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubripes:3

Q5KNN5              	100.00%		H2THT3              	100.00%
Bootstrap support for Q5KNN5 as seed ortholog is 100%.
Bootstrap support for H2THT3 as seed ortholog is 51%.
Alternative seed ortholog is H2SC75 (3 bits away from this cluster)

Group of orthologs #1337. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubripes:171

Q5KCH8              	100.00%		Q1KKW1              	100.00%
Bootstrap support for Q5KCH8 as seed ortholog is 100%.
Bootstrap support for Q1KKW1 as seed ortholog is 100%.

Group of orthologs #1338. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:170

P0CO02              	100.00%		H2RWP2              	100.00%
                    	       		H2S8A7              	100.00%
                    	       		H2RV44              	100.00%
                    	       		H2SD64              	100.00%
                    	       		H2S3P8              	98.59%
                    	       		H2S4N0              	98.59%
                    	       		H2RSB3              	97.18%
                    	       		H2RU21              	97.18%
                    	       		H2S439              	97.18%
                    	       		H2RUC9              	95.77%
                    	       		H2SIP9              	71.83%
                    	       		H2S5X0              	67.61%
                    	       		H2VB28              	61.97%
                    	       		H2SJC5              	9.86%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for H2RWP2 as seed ortholog is 100%.
Bootstrap support for H2S8A7 as seed ortholog is 100%.
Bootstrap support for H2RV44 as seed ortholog is 100%.
Bootstrap support for H2SD64 as seed ortholog is 100%.

Group of orthologs #1339. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:170

Q5KNP2              	100.00%		H2V0M0              	100.00%
                    	       		H2TQ06              	44.06%
                    	       		H2RXA7              	40.40%
                    	       		H2S8D2              	21.27%
                    	       		H2T7U5              	20.84%
                    	       		H2TX43              	20.78%
                    	       		H2VDF9              	20.66%
                    	       		H2VEN5              	17.43%
Bootstrap support for Q5KNP2 as seed ortholog is 100%.
Bootstrap support for H2V0M0 as seed ortholog is 100%.

Group of orthologs #1340. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:170

Q5KAJ2              	100.00%		H2RJC9              	100.00%
                    	       		H2T5Q7              	53.34%
                    	       		H2RMT0              	43.51%
Bootstrap support for Q5KAJ2 as seed ortholog is 100%.
Bootstrap support for H2RJC9 as seed ortholog is 100%.

Group of orthologs #1341. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:170

Q5KGD2              	100.00%		H2UJ48              	100.00%
Q5KID2              	24.66%		
Bootstrap support for Q5KGD2 as seed ortholog is 100%.
Bootstrap support for H2UJ48 as seed ortholog is 100%.

Group of orthologs #1342. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:170

Q5KNA8              	100.00%		H2RVL4              	100.00%
Bootstrap support for Q5KNA8 as seed ortholog is 100%.
Bootstrap support for H2RVL4 as seed ortholog is 100%.

Group of orthologs #1343. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:127

Q5KK99              	100.00%		H2SGW3              	100.00%
Bootstrap support for Q5KK99 as seed ortholog is 100%.
Bootstrap support for H2SGW3 as seed ortholog is 100%.

Group of orthologs #1344. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:121

Q5KIK8              	100.00%		H2SXE1              	100.00%
Bootstrap support for Q5KIK8 as seed ortholog is 100%.
Bootstrap support for H2SXE1 as seed ortholog is 99%.

Group of orthologs #1345. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubripes:40

Q5KJW2              	100.00%		H2TLF4              	100.00%
Bootstrap support for Q5KJW2 as seed ortholog is 97%.
Bootstrap support for H2TLF4 as seed ortholog is 95%.

Group of orthologs #1346. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubripes:170

Q5K905              	100.00%		H2VDZ3              	100.00%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for H2VDZ3 as seed ortholog is 100%.

Group of orthologs #1347. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubripes:169

Q5KEW0              	100.00%		H2T510              	100.00%
                    	       		H2TEI2              	35.08%
                    	       		H2V2V1              	26.98%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for H2T510 as seed ortholog is 100%.

Group of orthologs #1348. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubripes:93

Q5KN56              	100.00%		H2UZ48              	100.00%
Q5K6U5              	12.77%		H2V7S7              	33.33%
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for H2UZ48 as seed ortholog is 99%.

Group of orthologs #1349. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubripes:169

Q5KKT8              	100.00%		H2U1G7              	100.00%
                    	       		H2S3R9              	27.54%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for H2U1G7 as seed ortholog is 100%.

Group of orthologs #1350. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubripes:97

Q5KFS7              	100.00%		H2UR81              	100.00%
                    	       		H2V0X1              	100.00%
Bootstrap support for Q5KFS7 as seed ortholog is 100%.
Bootstrap support for H2UR81 as seed ortholog is 99%.
Bootstrap support for H2V0X1 as seed ortholog is 99%.

Group of orthologs #1351. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubripes:168

Q5K7I9              	100.00%		H2TCT3              	100.00%
Bootstrap support for Q5K7I9 as seed ortholog is 100%.
Bootstrap support for H2TCT3 as seed ortholog is 100%.

Group of orthologs #1352. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubripes:108

Q5KFD4              	100.00%		H2TQI9              	100.00%
Bootstrap support for Q5KFD4 as seed ortholog is 99%.
Bootstrap support for H2TQI9 as seed ortholog is 99%.

Group of orthologs #1353. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubripes:168

Q5K9S1              	100.00%		H2UBJ6              	100.00%
Bootstrap support for Q5K9S1 as seed ortholog is 100%.
Bootstrap support for H2UBJ6 as seed ortholog is 100%.

Group of orthologs #1354. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubripes:168

Q5KQ88              	100.00%		H2TZ76              	100.00%
Bootstrap support for Q5KQ88 as seed ortholog is 100%.
Bootstrap support for H2TZ76 as seed ortholog is 100%.

Group of orthologs #1355. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubripes:168

Q5K774              	100.00%		Q7T3R2              	100.00%
Bootstrap support for Q5K774 as seed ortholog is 100%.
Bootstrap support for Q7T3R2 as seed ortholog is 100%.

Group of orthologs #1356. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:167

Q5KK09              	100.00%		H2S048              	100.00%
Bootstrap support for Q5KK09 as seed ortholog is 100%.
Bootstrap support for H2S048 as seed ortholog is 100%.

Group of orthologs #1357. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:167

P0CS26              	100.00%		H2TYB1              	100.00%
Bootstrap support for P0CS26 as seed ortholog is 99%.
Bootstrap support for H2TYB1 as seed ortholog is 100%.

Group of orthologs #1358. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:167

Q5KHU0              	100.00%		H2TS96              	100.00%
Bootstrap support for Q5KHU0 as seed ortholog is 100%.
Bootstrap support for H2TS96 as seed ortholog is 100%.

Group of orthologs #1359. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:70

Q5KHZ1              	100.00%		H2UG48              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for H2UG48 as seed ortholog is 98%.

Group of orthologs #1360. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubripes:167

Q5KID5              	100.00%		H2UJG1              	100.00%
Bootstrap support for Q5KID5 as seed ortholog is 100%.
Bootstrap support for H2UJG1 as seed ortholog is 100%.

Group of orthologs #1361. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:166

Q5KHV8              	100.00%		H2S6R1              	100.00%
                    	       		H2TAM9              	64.41%
                    	       		H2UPN8              	9.49%
Bootstrap support for Q5KHV8 as seed ortholog is 99%.
Bootstrap support for H2S6R1 as seed ortholog is 100%.

Group of orthologs #1362. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubripes:166

Q5KN65              	100.00%		H2RJS3              	100.00%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for H2RJS3 as seed ortholog is 100%.

Group of orthologs #1363. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubripes:166

Q5KBE4              	100.00%		H2T401              	100.00%
Bootstrap support for Q5KBE4 as seed ortholog is 100%.
Bootstrap support for H2T401 as seed ortholog is 100%.

Group of orthologs #1364. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubripes:166

Q5KIJ6              	100.00%		H2TKL1              	100.00%
Bootstrap support for Q5KIJ6 as seed ortholog is 100%.
Bootstrap support for H2TKL1 as seed ortholog is 100%.

Group of orthologs #1365. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubripes:166

Q5KDH7              	100.00%		H2V0E8              	100.00%
Bootstrap support for Q5KDH7 as seed ortholog is 100%.
Bootstrap support for H2V0E8 as seed ortholog is 100%.

Group of orthologs #1366. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubripes:166

Q5KL74              	100.00%		H2V134              	100.00%
Bootstrap support for Q5KL74 as seed ortholog is 100%.
Bootstrap support for H2V134 as seed ortholog is 100%.

Group of orthologs #1367. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

P0CR78              	100.00%		H2UJI8              	100.00%
                    	       		H2TEE8              	37.75%
Bootstrap support for P0CR78 as seed ortholog is 100%.
Bootstrap support for H2UJI8 as seed ortholog is 100%.

Group of orthologs #1368. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

Q5KG24              	100.00%		H2SFB7              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 100%.
Bootstrap support for H2SFB7 as seed ortholog is 100%.

Group of orthologs #1369. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

Q5KMY4              	100.00%		H2S0C3              	100.00%
Bootstrap support for Q5KMY4 as seed ortholog is 100%.
Bootstrap support for H2S0C3 as seed ortholog is 100%.

Group of orthologs #1370. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

Q5KKY5              	100.00%		H2S781              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for H2S781 as seed ortholog is 100%.

Group of orthologs #1371. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

P0CR76              	100.00%		H2TKM2              	100.00%
Bootstrap support for P0CR76 as seed ortholog is 100%.
Bootstrap support for H2TKM2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

Q5KIC1              	100.00%		H2T809              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for H2T809 as seed ortholog is 100%.

Group of orthologs #1373. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

Q5KI55              	100.00%		H2U405              	100.00%
Bootstrap support for Q5KI55 as seed ortholog is 100%.
Bootstrap support for H2U405 as seed ortholog is 100%.

Group of orthologs #1374. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubripes:165

Q5KCN6              	100.00%		H2UVF7              	100.00%
Bootstrap support for Q5KCN6 as seed ortholog is 100%.
Bootstrap support for H2UVF7 as seed ortholog is 100%.

Group of orthologs #1375. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:11 T.rubripes:165

Q5KN08              	100.00%		H2UHG6              	100.00%
Bootstrap support for Q5KN08 as seed ortholog is 62%.
Alternative seed ortholog is Q5KJF0 (11 bits away from this cluster)
Bootstrap support for H2UHG6 as seed ortholog is 100%.

Group of orthologs #1376. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubripes:164

Q5K9V0              	100.00%		H2RR42              	100.00%
Bootstrap support for Q5K9V0 as seed ortholog is 100%.
Bootstrap support for H2RR42 as seed ortholog is 100%.

Group of orthologs #1377. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubripes:94

Q5KGI4              	100.00%		H2S8L1              	100.00%
Bootstrap support for Q5KGI4 as seed ortholog is 100%.
Bootstrap support for H2S8L1 as seed ortholog is 99%.

Group of orthologs #1378. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubripes:164

P0CQ12              	100.00%		H2TCA6              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for H2TCA6 as seed ortholog is 100%.

Group of orthologs #1379. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubripes:164

Q5K7J3              	100.00%		H2TGX4              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for H2TGX4 as seed ortholog is 100%.

Group of orthologs #1380. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubripes:164

Q5KF49              	100.00%		H2SWN1              	100.00%
Bootstrap support for Q5KF49 as seed ortholog is 98%.
Bootstrap support for H2SWN1 as seed ortholog is 100%.

Group of orthologs #1381. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubripes:164

Q5KLP4              	100.00%		H2T1D0              	100.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for H2T1D0 as seed ortholog is 100%.

Group of orthologs #1382. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubripes:164

Q5KGV8              	100.00%		H2UH84              	100.00%
Bootstrap support for Q5KGV8 as seed ortholog is 100%.
Bootstrap support for H2UH84 as seed ortholog is 100%.

Group of orthologs #1383. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:163

P0CM26              	100.00%		H2SM96              	100.00%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for H2SM96 as seed ortholog is 100%.

Group of orthologs #1384. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:163

Q5KBT3              	100.00%		H2S9R8              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for H2S9R8 as seed ortholog is 100%.

Group of orthologs #1385. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:163

Q5K7J1              	100.00%		H2U0J5              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for H2U0J5 as seed ortholog is 100%.

Group of orthologs #1386. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:163

Q5KK70              	100.00%		H2U8G3              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for H2U8G3 as seed ortholog is 100%.

Group of orthologs #1387. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubripes:163

Q5KL38              	100.00%		H2V785              	100.00%
Bootstrap support for Q5KL38 as seed ortholog is 100%.
Bootstrap support for H2V785 as seed ortholog is 100%.

Group of orthologs #1388. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

P0CP08              	100.00%		H2U988              	100.00%
                    	       		H2V7M4              	46.20%
Bootstrap support for P0CP08 as seed ortholog is 100%.
Bootstrap support for H2U988 as seed ortholog is 100%.

Group of orthologs #1389. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

Q5KLM0              	100.00%		H2TFC8              	100.00%
                    	       		H2T380              	35.24%
Bootstrap support for Q5KLM0 as seed ortholog is 100%.
Bootstrap support for H2TFC8 as seed ortholog is 100%.

Group of orthologs #1390. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

Q5KDK1              	100.00%		H2V7Q9              	100.00%
                    	       		H2U1E0              	42.09%
Bootstrap support for Q5KDK1 as seed ortholog is 100%.
Bootstrap support for H2V7Q9 as seed ortholog is 100%.

Group of orthologs #1391. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:95

Q5KIF5              	100.00%		H2V8K7              	100.00%
                    	       		H2S5T4              	71.32%
Bootstrap support for Q5KIF5 as seed ortholog is 100%.
Bootstrap support for H2V8K7 as seed ortholog is 99%.

Group of orthologs #1392. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

Q5KLJ6              	100.00%		H2TQK1              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for H2TQK1 as seed ortholog is 100%.

Group of orthologs #1393. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

Q5KC23              	100.00%		H2UKM2              	100.00%
Bootstrap support for Q5KC23 as seed ortholog is 100%.
Bootstrap support for H2UKM2 as seed ortholog is 100%.

Group of orthologs #1394. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

Q5K888              	100.00%		H2UYN3              	100.00%
Bootstrap support for Q5K888 as seed ortholog is 100%.
Bootstrap support for H2UYN3 as seed ortholog is 100%.

Group of orthologs #1395. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubripes:162

Q5KK73              	100.00%		H2UTX9              	100.00%
Bootstrap support for Q5KK73 as seed ortholog is 100%.
Bootstrap support for H2UTX9 as seed ortholog is 100%.

Group of orthologs #1396. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:62

Q5KIG3              	100.00%		H2UCU3              	100.00%
Q5KAW2              	100.00%		H2SSE6              	100.00%
                    	       		H2TFU8              	63.67%
                    	       		H2TVY4              	63.06%
                    	       		H2V8Q9              	54.69%
                    	       		H2T122              	46.73%
Bootstrap support for Q5KIG3 as seed ortholog is 100%.
Bootstrap support for Q5KAW2 as seed ortholog is 100%.
Bootstrap support for H2UCU3 as seed ortholog is 95%.
Bootstrap support for H2SSE6 as seed ortholog is 89%.

Group of orthologs #1397. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:161

Q5KDG1              	100.00%		H2RLX0              	100.00%
                    	       		H2SMH4              	19.82%
                    	       		H2RP52              	19.70%
                    	       		H2SCC8              	17.47%
                    	       		H2TH27              	16.75%
Bootstrap support for Q5KDG1 as seed ortholog is 100%.
Bootstrap support for H2RLX0 as seed ortholog is 100%.

Group of orthologs #1398. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:107

Q5K9G2              	100.00%		H2RQL0              	100.00%
                    	       		Q9W698              	99.72%
Bootstrap support for Q5K9G2 as seed ortholog is 100%.
Bootstrap support for H2RQL0 as seed ortholog is 99%.

Group of orthologs #1399. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:161

Q5KN19              	100.00%		H2RUT3              	100.00%
Q5KK57              	21.70%		
Bootstrap support for Q5KN19 as seed ortholog is 100%.
Bootstrap support for H2RUT3 as seed ortholog is 100%.

Group of orthologs #1400. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:161

P0CO96              	100.00%		H2UFA2              	100.00%
Bootstrap support for P0CO96 as seed ortholog is 100%.
Bootstrap support for H2UFA2 as seed ortholog is 100%.

Group of orthologs #1401. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:161

Q5KH16              	100.00%		H2TPX7              	100.00%
Bootstrap support for Q5KH16 as seed ortholog is 100%.
Bootstrap support for H2TPX7 as seed ortholog is 100%.

Group of orthologs #1402. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:161

Q5KE51              	100.00%		H2U942              	100.00%
Bootstrap support for Q5KE51 as seed ortholog is 98%.
Bootstrap support for H2U942 as seed ortholog is 100%.

Group of orthologs #1403. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:161

Q5KJT1              	100.00%		H2UUR9              	100.00%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for H2UUR9 as seed ortholog is 100%.

Group of orthologs #1404. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubripes:161

Q5KPP8              	100.00%		H2V4E1              	100.00%
Bootstrap support for Q5KPP8 as seed ortholog is 100%.
Bootstrap support for H2V4E1 as seed ortholog is 100%.

Group of orthologs #1405. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:160

Q5KG53              	100.00%		H2U7B3              	100.00%
Q5KEM9              	8.06%		
Q5KLC1              	8.06%		
Q5KFZ8              	7.44%		
Bootstrap support for Q5KG53 as seed ortholog is 89%.
Bootstrap support for H2U7B3 as seed ortholog is 100%.

Group of orthologs #1406. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:89

Q5KHB9              	100.00%		H2UAR4              	100.00%
                    	       		H2RM72              	32.52%
Bootstrap support for Q5KHB9 as seed ortholog is 100%.
Bootstrap support for H2UAR4 as seed ortholog is 99%.

Group of orthologs #1407. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:160

P0CO36              	100.00%		H2S0J7              	100.00%
Bootstrap support for P0CO36 as seed ortholog is 100%.
Bootstrap support for H2S0J7 as seed ortholog is 100%.

Group of orthologs #1408. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:160

Q5KHG1              	100.00%		H2SE72              	100.00%
Bootstrap support for Q5KHG1 as seed ortholog is 100%.
Bootstrap support for H2SE72 as seed ortholog is 100%.

Group of orthologs #1409. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:160

Q5K864              	100.00%		H2TGH5              	100.00%
Bootstrap support for Q5K864 as seed ortholog is 100%.
Bootstrap support for H2TGH5 as seed ortholog is 100%.

Group of orthologs #1410. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:8 T.rubripes:61

Q5K705              	100.00%		H2TQC7              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 55%.
Alternative seed ortholog is Q5KH65 (8 bits away from this cluster)
Bootstrap support for H2TQC7 as seed ortholog is 99%.

Group of orthologs #1411. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:160

Q5KJB4              	100.00%		H2TL52              	100.00%
Bootstrap support for Q5KJB4 as seed ortholog is 100%.
Bootstrap support for H2TL52 as seed ortholog is 100%.

Group of orthologs #1412. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:27 T.rubripes:64

Q5KKM2              	100.00%		H2U0L3              	100.00%
Bootstrap support for Q5KKM2 as seed ortholog is 76%.
Bootstrap support for H2U0L3 as seed ortholog is 95%.

Group of orthologs #1413. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubripes:160

Q5KEC3              	100.00%		H2V9Y4              	100.00%
Bootstrap support for Q5KEC3 as seed ortholog is 100%.
Bootstrap support for H2V9Y4 as seed ortholog is 100%.

Group of orthologs #1414. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

Q5KD55              	100.00%		H2SID0              	100.00%
                    	       		H2RJK9              	42.39%
Bootstrap support for Q5KD55 as seed ortholog is 98%.
Bootstrap support for H2SID0 as seed ortholog is 98%.

Group of orthologs #1415. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:109

Q5KLP3              	100.00%		H2SUK4              	100.00%
                    	       		H2V4R0              	5.94%
Bootstrap support for Q5KLP3 as seed ortholog is 100%.
Bootstrap support for H2SUK4 as seed ortholog is 100%.

Group of orthologs #1416. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:159

Q5KI19              	100.00%		H2U2Y5              	100.00%
                    	       		H2TBI9              	48.22%
Bootstrap support for Q5KI19 as seed ortholog is 100%.
Bootstrap support for H2U2Y5 as seed ortholog is 100%.

Group of orthologs #1417. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:159

Q5KAN9              	100.00%		H2S0L1              	100.00%
Bootstrap support for Q5KAN9 as seed ortholog is 100%.
Bootstrap support for H2S0L1 as seed ortholog is 100%.

Group of orthologs #1418. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:159

P0CN62              	100.00%		H2SHX2              	100.00%
Bootstrap support for P0CN62 as seed ortholog is 100%.
Bootstrap support for H2SHX2 as seed ortholog is 100%.

Group of orthologs #1419. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:159

Q5KCF0              	100.00%		H2T1G3              	100.00%
Bootstrap support for Q5KCF0 as seed ortholog is 100%.
Bootstrap support for H2T1G3 as seed ortholog is 100%.

Group of orthologs #1420. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubripes:159

Q5KBG5              	100.00%		H2U667              	100.00%
Bootstrap support for Q5KBG5 as seed ortholog is 100%.
Bootstrap support for H2U667 as seed ortholog is 100%.

Group of orthologs #1421. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KCN0              	100.00%		H2RQP4              	100.00%
                    	       		H2UT84              	18.73%
                    	       		H2V8M7              	17.77%
Bootstrap support for Q5KCN0 as seed ortholog is 100%.
Bootstrap support for H2RQP4 as seed ortholog is 100%.

Group of orthologs #1422. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KIA1              	100.00%		H2RUK9              	100.00%
                    	       		H2RVI7              	47.35%
                    	       		H2RUJ8              	41.19%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for H2RUK9 as seed ortholog is 100%.

Group of orthologs #1423. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KDT5              	100.00%		H2SXD8              	100.00%
                    	       		H2T522              	31.68%
Bootstrap support for Q5KDT5 as seed ortholog is 100%.
Bootstrap support for H2SXD8 as seed ortholog is 100%.

Group of orthologs #1424. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KFA1              	100.00%		H2TMC2              	100.00%
                    	       		H2SRR0              	75.82%
Bootstrap support for Q5KFA1 as seed ortholog is 100%.
Bootstrap support for H2TMC2 as seed ortholog is 100%.

Group of orthologs #1425. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:22

Q5KLL8              	100.00%		H2T549              	100.00%
                    	       		H2VBM9              	18.41%
Bootstrap support for Q5KLL8 as seed ortholog is 100%.
Bootstrap support for H2T549 as seed ortholog is 70%.
Alternative seed ortholog is H2S3P5 (22 bits away from this cluster)

Group of orthologs #1426. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5K6U7              	100.00%		H2SR70              	100.00%
Bootstrap support for Q5K6U7 as seed ortholog is 100%.
Bootstrap support for H2SR70 as seed ortholog is 100%.

Group of orthologs #1427. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KLB0              	100.00%		H2SGS2              	100.00%
Bootstrap support for Q5KLB0 as seed ortholog is 100%.
Bootstrap support for H2SGS2 as seed ortholog is 100%.

Group of orthologs #1428. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:114

Q5KFJ2              	100.00%		H2TFZ8              	100.00%
Bootstrap support for Q5KFJ2 as seed ortholog is 100%.
Bootstrap support for H2TFZ8 as seed ortholog is 99%.

Group of orthologs #1429. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:113

Q5KMC4              	100.00%		H2TE46              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for H2TE46 as seed ortholog is 100%.

Group of orthologs #1430. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KIZ4              	100.00%		H2TZ78              	100.00%
Bootstrap support for Q5KIZ4 as seed ortholog is 100%.
Bootstrap support for H2TZ78 as seed ortholog is 100%.

Group of orthologs #1431. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubripes:158

Q5KE79              	100.00%		H2UDY2              	100.00%
Bootstrap support for Q5KE79 as seed ortholog is 100%.
Bootstrap support for H2UDY2 as seed ortholog is 100%.

Group of orthologs #1432. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:157

Q5KNT0              	100.00%		H2TV58              	100.00%
                    	       		H2S2M4              	69.78%
Bootstrap support for Q5KNT0 as seed ortholog is 100%.
Bootstrap support for H2TV58 as seed ortholog is 100%.

Group of orthologs #1433. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:157

Q5KIH4              	100.00%		H2UH56              	100.00%
                    	       		H2UZW0              	78.90%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for H2UH56 as seed ortholog is 100%.

Group of orthologs #1434. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:157

P0CP64              	100.00%		H2SVH5              	100.00%
Bootstrap support for P0CP64 as seed ortholog is 100%.
Bootstrap support for H2SVH5 as seed ortholog is 100%.

Group of orthologs #1435. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:157

Q5KLL5              	100.00%		H2S7P6              	100.00%
Bootstrap support for Q5KLL5 as seed ortholog is 100%.
Bootstrap support for H2S7P6 as seed ortholog is 100%.

Group of orthologs #1436. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:83

Q5KIP7              	100.00%		H2SML0              	100.00%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for H2SML0 as seed ortholog is 98%.

Group of orthologs #1437. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:81

Q5K6U2              	100.00%		H2UYE0              	100.00%
Bootstrap support for Q5K6U2 as seed ortholog is 89%.
Bootstrap support for H2UYE0 as seed ortholog is 98%.

Group of orthologs #1438. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:157

Q5KDT1              	100.00%		H2UWE0              	100.00%
Bootstrap support for Q5KDT1 as seed ortholog is 100%.
Bootstrap support for H2UWE0 as seed ortholog is 100%.

Group of orthologs #1439. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubripes:157

Q5KL76              	100.00%		H2UM70              	100.00%
Bootstrap support for Q5KL76 as seed ortholog is 100%.
Bootstrap support for H2UM70 as seed ortholog is 100%.

Group of orthologs #1440. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:156

Q5KN11              	100.00%		H2RVL8              	100.00%
Q5KKI9              	23.63%		
Q5KJK5              	8.20%		
Bootstrap support for Q5KN11 as seed ortholog is 93%.
Bootstrap support for H2RVL8 as seed ortholog is 100%.

Group of orthologs #1441. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:38 T.rubripes:156

Q5KDX1              	100.00%		H2UWW9              	100.00%
                    	       		H2S021              	46.44%
                    	       		H2RU77              	14.53%
Bootstrap support for Q5KDX1 as seed ortholog is 89%.
Bootstrap support for H2UWW9 as seed ortholog is 100%.

Group of orthologs #1442. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

P0CP94              	100.00%		H2S3V5              	100.00%
                    	       		H2SFL7              	25.71%
Bootstrap support for P0CP94 as seed ortholog is 100%.
Bootstrap support for H2S3V5 as seed ortholog is 100%.

Group of orthologs #1443. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

Q5KAE9              	100.00%		H2RPT1              	100.00%
Bootstrap support for Q5KAE9 as seed ortholog is 100%.
Bootstrap support for H2RPT1 as seed ortholog is 100%.

Group of orthologs #1444. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

Q5KAU4              	100.00%		H2SEF0              	100.00%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for H2SEF0 as seed ortholog is 100%.

Group of orthologs #1445. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

Q5KM24              	100.00%		H2RSL9              	100.00%
Bootstrap support for Q5KM24 as seed ortholog is 100%.
Bootstrap support for H2RSL9 as seed ortholog is 100%.

Group of orthologs #1446. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

P0CM76              	100.00%		H2U4P2              	100.00%
Bootstrap support for P0CM76 as seed ortholog is 100%.
Bootstrap support for H2U4P2 as seed ortholog is 100%.

Group of orthologs #1447. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

Q5KL21              	100.00%		H2T8D8              	100.00%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for H2T8D8 as seed ortholog is 100%.

Group of orthologs #1448. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

Q5KJ67              	100.00%		H2TFW8              	100.00%
Bootstrap support for Q5KJ67 as seed ortholog is 100%.
Bootstrap support for H2TFW8 as seed ortholog is 100%.

Group of orthologs #1449. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubripes:156

Q5KPC0              	100.00%		H2TI94              	100.00%
Bootstrap support for Q5KPC0 as seed ortholog is 100%.
Bootstrap support for H2TI94 as seed ortholog is 100%.

Group of orthologs #1450. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubripes:155

Q5KM44              	100.00%		H2RKD5              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for H2RKD5 as seed ortholog is 100%.

Group of orthologs #1451. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubripes:155

Q5KHX0              	100.00%		H2SJD7              	100.00%
Bootstrap support for Q5KHX0 as seed ortholog is 100%.
Bootstrap support for H2SJD7 as seed ortholog is 100%.

Group of orthologs #1452. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubripes:155

Q5KMG9              	100.00%		H2SB86              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for H2SB86 as seed ortholog is 100%.

Group of orthologs #1453. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubripes:155

Q5KJ57              	100.00%		H2UW80              	100.00%
Bootstrap support for Q5KJ57 as seed ortholog is 100%.
Bootstrap support for H2UW80 as seed ortholog is 100%.

Group of orthologs #1454. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubripes:154

Q5KJ21              	100.00%		H2UA73              	100.00%
Q5K7P5              	34.23%		H2TJ59              	45.18%
Q5KHG5              	32.44%		
Bootstrap support for Q5KJ21 as seed ortholog is 96%.
Bootstrap support for H2UA73 as seed ortholog is 100%.

Group of orthologs #1455. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubripes:154

Q5K778              	100.00%		H2T2V3              	100.00%
                    	       		H2TJL7              	18.71%
Bootstrap support for Q5K778 as seed ortholog is 100%.
Bootstrap support for H2T2V3 as seed ortholog is 100%.

Group of orthologs #1456. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubripes:154

Q5KF78              	100.00%		H2TYV4              	100.00%
Bootstrap support for Q5KF78 as seed ortholog is 100%.
Bootstrap support for H2TYV4 as seed ortholog is 100%.

Group of orthologs #1457. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubripes:154

Q5KGP8              	100.00%		H2URN0              	100.00%
Bootstrap support for Q5KGP8 as seed ortholog is 100%.
Bootstrap support for H2URN0 as seed ortholog is 100%.

Group of orthologs #1458. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5KGR3              	100.00%		H2V8E4              	100.00%
                    	       		H2T2Y8              	29.40%
                    	       		H2TJE7              	26.30%
                    	       		H2TY76              	23.91%
                    	       		H2V3L8              	23.21%
                    	       		H2TMD4              	19.41%
Bootstrap support for Q5KGR3 as seed ortholog is 100%.
Bootstrap support for H2V8E4 as seed ortholog is 100%.

Group of orthologs #1459. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:34

Q5KLY1              	100.00%		H2SH25              	100.00%
                    	       		H2U1W7              	64.32%
Bootstrap support for Q5KLY1 as seed ortholog is 96%.
Bootstrap support for H2SH25 as seed ortholog is 98%.

Group of orthologs #1460. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5KB82              	100.00%		H2SMA6              	100.00%
Bootstrap support for Q5KB82 as seed ortholog is 100%.
Bootstrap support for H2SMA6 as seed ortholog is 100%.

Group of orthologs #1461. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5KJL8              	100.00%		H2SMS1              	100.00%
Bootstrap support for Q5KJL8 as seed ortholog is 100%.
Bootstrap support for H2SMS1 as seed ortholog is 100%.

Group of orthologs #1462. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5K7B3              	100.00%		H2URU1              	100.00%
Bootstrap support for Q5K7B3 as seed ortholog is 100%.
Bootstrap support for H2URU1 as seed ortholog is 100%.

Group of orthologs #1463. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:75

Q5KNG9              	100.00%		H2TI72              	100.00%
Bootstrap support for Q5KNG9 as seed ortholog is 86%.
Bootstrap support for H2TI72 as seed ortholog is 96%.

Group of orthologs #1464. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5KNR2              	100.00%		H2TLP5              	100.00%
Bootstrap support for Q5KNR2 as seed ortholog is 100%.
Bootstrap support for H2TLP5 as seed ortholog is 100%.

Group of orthologs #1465. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:153

Q5KJ65              	100.00%		H2UGD8              	100.00%
Bootstrap support for Q5KJ65 as seed ortholog is 93%.
Bootstrap support for H2UGD8 as seed ortholog is 100%.

Group of orthologs #1466. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5KG66              	100.00%		H2URK0              	100.00%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for H2URK0 as seed ortholog is 100%.

Group of orthologs #1467. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:85

Q5KNX4              	100.00%		H2UJX4              	100.00%
Bootstrap support for Q5KNX4 as seed ortholog is 100%.
Bootstrap support for H2UJX4 as seed ortholog is 98%.

Group of orthologs #1468. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubripes:153

Q5KGJ8              	100.00%		H2VBZ2              	100.00%
Bootstrap support for Q5KGJ8 as seed ortholog is 100%.
Bootstrap support for H2VBZ2 as seed ortholog is 100%.

Group of orthologs #1469. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:152

Q5KNU9              	100.00%		H2USZ1              	100.00%
                    	       		H2RYN8              	71.75%
                    	       		Q6ZZY9              	47.53%
                    	       		H2VCC1              	43.40%
Bootstrap support for Q5KNU9 as seed ortholog is 87%.
Bootstrap support for H2USZ1 as seed ortholog is 100%.

Group of orthologs #1470. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:152

Q5KK88              	100.00%		H2UQQ7              	100.00%
                    	       		H2VBT6              	80.12%
Bootstrap support for Q5KK88 as seed ortholog is 100%.
Bootstrap support for H2UQQ7 as seed ortholog is 100%.

Group of orthologs #1471. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:152

Q5KGD6              	100.00%		H2VD56              	100.00%
                    	       		H2RXV2              	19.25%
Bootstrap support for Q5KGD6 as seed ortholog is 100%.
Bootstrap support for H2VD56 as seed ortholog is 100%.

Group of orthologs #1472. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:25

Q5K9I3              	100.00%		H2S739              	100.00%
Bootstrap support for Q5K9I3 as seed ortholog is 100%.
Bootstrap support for H2S739 as seed ortholog is 99%.

Group of orthologs #1473. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:152

Q5KGK3              	100.00%		H2U8I3              	100.00%
Bootstrap support for Q5KGK3 as seed ortholog is 100%.
Bootstrap support for H2U8I3 as seed ortholog is 100%.

Group of orthologs #1474. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:152

Q5KB21              	100.00%		H2USW1              	100.00%
Bootstrap support for Q5KB21 as seed ortholog is 100%.
Bootstrap support for H2USW1 as seed ortholog is 100%.

Group of orthologs #1475. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubripes:152

Q5KHK0              	100.00%		H2V443              	100.00%
Bootstrap support for Q5KHK0 as seed ortholog is 100%.
Bootstrap support for H2V443 as seed ortholog is 100%.

Group of orthologs #1476. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubripes:151

Q5KFL1              	100.00%		H2T8Y9              	100.00%
                    	       		H2RP63              	51.22%
                    	       		H2S3J6              	48.67%
                    	       		H2STW8              	48.56%
                    	       		H2SF89              	47.12%
Bootstrap support for Q5KFL1 as seed ortholog is 100%.
Bootstrap support for H2T8Y9 as seed ortholog is 100%.

Group of orthologs #1477. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubripes:151

Q5KP23              	100.00%		H2TPR9              	100.00%
                    	       		H2SWW8              	30.19%
Bootstrap support for Q5KP23 as seed ortholog is 100%.
Bootstrap support for H2TPR9 as seed ortholog is 100%.

Group of orthologs #1478. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubripes:151

Q5KP56              	100.00%		H2U5H8              	100.00%
                    	       		H2TNM4              	39.58%
Bootstrap support for Q5KP56 as seed ortholog is 100%.
Bootstrap support for H2U5H8 as seed ortholog is 100%.

Group of orthologs #1479. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubripes:83

Q5KDJ4              	100.00%		H2S4J5              	100.00%
Bootstrap support for Q5KDJ4 as seed ortholog is 100%.
Bootstrap support for H2S4J5 as seed ortholog is 95%.

Group of orthologs #1480. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubripes:151

P0CP16              	100.00%		H2SX12              	100.00%
Bootstrap support for P0CP16 as seed ortholog is 100%.
Bootstrap support for H2SX12 as seed ortholog is 100%.

Group of orthologs #1481. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubripes:64

Q5KM35              	100.00%		H2T440              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 100%.
Bootstrap support for H2T440 as seed ortholog is 99%.

Group of orthologs #1482. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:6

Q5KNY9              	100.00%		H2UHW4              	100.00%
                    	       		H2TP82              	29.92%
                    	       		H2T6Y0              	27.56%
                    	       		H2RX66              	24.52%
Bootstrap support for Q5KNY9 as seed ortholog is 96%.
Bootstrap support for H2UHW4 as seed ortholog is 56%.
Alternative seed ortholog is H2U271 (6 bits away from this cluster)

Group of orthologs #1483. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubripes:54

Q5KLV6              	100.00%		H2RT58              	100.00%
Bootstrap support for Q5KLV6 as seed ortholog is 100%.
Bootstrap support for H2RT58 as seed ortholog is 89%.

Group of orthologs #1484. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubripes:83

Q5KEX0              	100.00%		H2T4F4              	100.00%
Bootstrap support for Q5KEX0 as seed ortholog is 100%.
Bootstrap support for H2T4F4 as seed ortholog is 100%.

Group of orthologs #1485. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubripes:150

Q5KDS7              	100.00%		H2U1T0              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 100%.
Bootstrap support for H2U1T0 as seed ortholog is 100%.

Group of orthologs #1486. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubripes:55

P0CP96              	100.00%		H2VCN2              	100.00%
Bootstrap support for P0CP96 as seed ortholog is 100%.
Bootstrap support for H2VCN2 as seed ortholog is 99%.

Group of orthologs #1487. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:11

P0CO54              	100.00%		H2TXA4              	100.00%
                    	       		H2THZ3              	8.90%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for H2TXA4 as seed ortholog is 75%.

Group of orthologs #1488. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:149

Q5KID1              	100.00%		H2TGJ6              	100.00%
                    	       		H2TKH7              	14.86%
Bootstrap support for Q5KID1 as seed ortholog is 100%.
Bootstrap support for H2TGJ6 as seed ortholog is 100%.

Group of orthologs #1489. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:69

Q5KKM7              	100.00%		H2TBV8              	100.00%
                    	       		H2SH21              	27.46%
Bootstrap support for Q5KKM7 as seed ortholog is 93%.
Bootstrap support for H2TBV8 as seed ortholog is 90%.

Group of orthologs #1490. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:88

Q5KPH8              	100.00%		H2TWF4              	100.00%
                    	       		H2SH53              	33.84%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for H2TWF4 as seed ortholog is 99%.

Group of orthologs #1491. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:149

Q5KA81              	100.00%		H2RTU1              	100.00%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for H2RTU1 as seed ortholog is 100%.

Group of orthologs #1492. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:149

Q5KM54              	100.00%		H2S698              	100.00%
Bootstrap support for Q5KM54 as seed ortholog is 100%.
Bootstrap support for H2S698 as seed ortholog is 100%.

Group of orthologs #1493. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:149

Q5KJL6              	100.00%		H2TYD0              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for H2TYD0 as seed ortholog is 100%.

Group of orthologs #1494. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubripes:149

Q5KIH1              	100.00%		H2ULI5              	100.00%
Bootstrap support for Q5KIH1 as seed ortholog is 100%.
Bootstrap support for H2ULI5 as seed ortholog is 100%.

Group of orthologs #1495. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubripes:148

Q5KE38              	100.00%		H2UL10              	100.00%
                    	       		H2SDJ1              	37.31%
Bootstrap support for Q5KE38 as seed ortholog is 100%.
Bootstrap support for H2UL10 as seed ortholog is 100%.

Group of orthologs #1496. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:148

Q5K7G5              	100.00%		H2TS12              	100.00%
Bootstrap support for Q5K7G5 as seed ortholog is 90%.
Bootstrap support for H2TS12 as seed ortholog is 100%.

Group of orthologs #1497. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubripes:148

Q5KCP3              	100.00%		H2U0M3              	100.00%
Bootstrap support for Q5KCP3 as seed ortholog is 100%.
Bootstrap support for H2U0M3 as seed ortholog is 100%.

Group of orthologs #1498. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubripes:89

Q5K8H3              	100.00%		H2T3V5              	100.00%
Bootstrap support for Q5K8H3 as seed ortholog is 100%.
Bootstrap support for H2T3V5 as seed ortholog is 99%.

Group of orthologs #1499. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubripes:147

Q5KMI3              	100.00%		H2T3B0              	100.00%
Bootstrap support for Q5KMI3 as seed ortholog is 100%.
Bootstrap support for H2T3B0 as seed ortholog is 100%.

Group of orthologs #1500. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5KNC7              	100.00%		H2RXW2              	100.00%
                    	       		Q1KKS2              	71.05%
                    	       		Q1KL06              	38.16%
Bootstrap support for Q5KNC7 as seed ortholog is 100%.
Bootstrap support for H2RXW2 as seed ortholog is 100%.

Group of orthologs #1501. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5KFS4              	100.00%		H2SS02              	100.00%
                    	       		H2TQP4              	15.19%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for H2SS02 as seed ortholog is 100%.

Group of orthologs #1502. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5K8N6              	100.00%		H2TS88              	100.00%
                    	       		H2VEE1              	29.34%
Bootstrap support for Q5K8N6 as seed ortholog is 100%.
Bootstrap support for H2TS88 as seed ortholog is 100%.

Group of orthologs #1503. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5KJP0              	100.00%		H2SAM8              	100.00%
Bootstrap support for Q5KJP0 as seed ortholog is 100%.
Bootstrap support for H2SAM8 as seed ortholog is 100%.

Group of orthologs #1504. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5K9M5              	100.00%		H2TI11              	100.00%
Bootstrap support for Q5K9M5 as seed ortholog is 100%.
Bootstrap support for H2TI11 as seed ortholog is 100%.

Group of orthologs #1505. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:25

Q5KFL6              	100.00%		H2TMF2              	100.00%
Bootstrap support for Q5KFL6 as seed ortholog is 100%.
Bootstrap support for H2TMF2 as seed ortholog is 87%.

Group of orthologs #1506. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5K9N6              	100.00%		H2UEF9              	100.00%
Bootstrap support for Q5K9N6 as seed ortholog is 100%.
Bootstrap support for H2UEF9 as seed ortholog is 100%.

Group of orthologs #1507. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

P0CN12              	100.00%		H2UWQ8              	100.00%
Bootstrap support for P0CN12 as seed ortholog is 100%.
Bootstrap support for H2UWQ8 as seed ortholog is 100%.

Group of orthologs #1508. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5KFJ8              	100.00%		H2UAQ7              	100.00%
Bootstrap support for Q5KFJ8 as seed ortholog is 100%.
Bootstrap support for H2UAQ7 as seed ortholog is 100%.

Group of orthologs #1509. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5KMC2              	100.00%		H2TVV0              	100.00%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for H2TVV0 as seed ortholog is 100%.

Group of orthologs #1510. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubripes:146

Q5KPB1              	100.00%		H2UFC3              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for H2UFC3 as seed ortholog is 100%.

Group of orthologs #1511. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:78

P0CR54              	100.00%		H2RZ70              	100.00%
                    	       		H2SPD4              	49.85%
                    	       		H2TAQ3              	28.17%
Bootstrap support for P0CR54 as seed ortholog is 100%.
Bootstrap support for H2RZ70 as seed ortholog is 98%.

Group of orthologs #1512. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

Q5KNZ5              	100.00%		H2S6T3              	100.00%
                    	       		H2UAK7              	11.85%
                    	       		H2RRA3              	8.30%
Bootstrap support for Q5KNZ5 as seed ortholog is 100%.
Bootstrap support for H2S6T3 as seed ortholog is 100%.

Group of orthologs #1513. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

Q5KEP5              	100.00%		H2U033              	100.00%
                    	       		H2T672              	57.14%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for H2U033 as seed ortholog is 100%.

Group of orthologs #1514. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

Q5KD76              	100.00%		H2SK08              	100.00%
Bootstrap support for Q5KD76 as seed ortholog is 100%.
Bootstrap support for H2SK08 as seed ortholog is 100%.

Group of orthologs #1515. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

P0CQ26              	100.00%		H2T7P2              	100.00%
Bootstrap support for P0CQ26 as seed ortholog is 100%.
Bootstrap support for H2T7P2 as seed ortholog is 100%.

Group of orthologs #1516. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

Q5KMX2              	100.00%		H2TD27              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 100%.
Bootstrap support for H2TD27 as seed ortholog is 100%.

Group of orthologs #1517. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

Q5KCL5              	100.00%		H2UL07              	100.00%
Bootstrap support for Q5KCL5 as seed ortholog is 100%.
Bootstrap support for H2UL07 as seed ortholog is 100%.

Group of orthologs #1518. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubripes:145

Q5K8V5              	100.00%		H2UYJ9              	100.00%
Bootstrap support for Q5K8V5 as seed ortholog is 100%.
Bootstrap support for H2UYJ9 as seed ortholog is 100%.

Group of orthologs #1519. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:145

Q5K8W2              	100.00%		H2VCN1              	100.00%
Bootstrap support for Q5K8W2 as seed ortholog is 100%.
Bootstrap support for H2VCN1 as seed ortholog is 100%.

Group of orthologs #1520. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KFQ2              	100.00%		H2SC38              	100.00%
Q5KQ86              	100.00%		
Bootstrap support for Q5KFQ2 as seed ortholog is 100%.
Bootstrap support for Q5KQ86 as seed ortholog is 100%.
Bootstrap support for H2SC38 as seed ortholog is 100%.

Group of orthologs #1521. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:55

Q5KJT6              	100.00%		H2S8W8              	100.00%
                    	       		H2VBU8              	45.62%
Bootstrap support for Q5KJT6 as seed ortholog is 98%.
Bootstrap support for H2S8W8 as seed ortholog is 92%.

Group of orthologs #1522. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:27 T.rubripes:18

Q5KG67              	100.00%		H2SKL2              	100.00%
                    	       		H2VB50              	11.71%
Bootstrap support for Q5KG67 as seed ortholog is 82%.
Bootstrap support for H2SKL2 as seed ortholog is 98%.

Group of orthologs #1523. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:20 T.rubripes:5

Q5K6W6              	100.00%		H2UQN7              	100.00%
                    	       		H2RY09              	24.96%
Bootstrap support for Q5K6W6 as seed ortholog is 95%.
Bootstrap support for H2UQN7 as seed ortholog is 56%.
Alternative seed ortholog is H2V6N9 (5 bits away from this cluster)

Group of orthologs #1524. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:23

Q5KCM4              	100.00%		H2UWR0              	100.00%
                    	       		H2SLI5              	28.10%
Bootstrap support for Q5KCM4 as seed ortholog is 100%.
Bootstrap support for H2UWR0 as seed ortholog is 93%.

Group of orthologs #1525. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KIK2              	100.00%		H2RM42              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for H2RM42 as seed ortholog is 100%.

Group of orthologs #1526. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5K7E8              	100.00%		H2TBQ8              	100.00%
Bootstrap support for Q5K7E8 as seed ortholog is 100%.
Bootstrap support for H2TBQ8 as seed ortholog is 100%.

Group of orthologs #1527. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KJC7              	100.00%		H2SE52              	100.00%
Bootstrap support for Q5KJC7 as seed ortholog is 100%.
Bootstrap support for H2SE52 as seed ortholog is 100%.

Group of orthologs #1528. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:24 T.rubripes:144

Q5KGJ0              	100.00%		H2SP67              	100.00%
Bootstrap support for Q5KGJ0 as seed ortholog is 80%.
Bootstrap support for H2SP67 as seed ortholog is 100%.

Group of orthologs #1529. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KN73              	100.00%		H2SX33              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for H2SX33 as seed ortholog is 100%.

Group of orthologs #1530. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:144

Q5KM13              	100.00%		H2T5U7              	100.00%
Bootstrap support for Q5KM13 as seed ortholog is 87%.
Bootstrap support for H2T5U7 as seed ortholog is 100%.

Group of orthologs #1531. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KPH7              	100.00%		H2T7G0              	100.00%
Bootstrap support for Q5KPH7 as seed ortholog is 100%.
Bootstrap support for H2T7G0 as seed ortholog is 100%.

Group of orthologs #1532. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KKK1              	100.00%		H2UDG9              	100.00%
Bootstrap support for Q5KKK1 as seed ortholog is 100%.
Bootstrap support for H2UDG9 as seed ortholog is 100%.

Group of orthologs #1533. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubripes:144

Q5KPM8              	100.00%		H2UMT1              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for H2UMT1 as seed ortholog is 100%.

Group of orthologs #1534. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:143

Q5KDF1              	100.00%		H2U7I9              	100.00%
                    	       		H2TZ51              	42.94%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for H2U7I9 as seed ortholog is 100%.

Group of orthologs #1535. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:51

Q5K9G6              	100.00%		H2SBJ2              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for H2SBJ2 as seed ortholog is 95%.

Group of orthologs #1536. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:143

Q5KL67              	100.00%		H2RNB7              	100.00%
Bootstrap support for Q5KL67 as seed ortholog is 100%.
Bootstrap support for H2RNB7 as seed ortholog is 100%.

Group of orthologs #1537. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:143

Q5KPE6              	100.00%		H2RL17              	100.00%
Bootstrap support for Q5KPE6 as seed ortholog is 100%.
Bootstrap support for H2RL17 as seed ortholog is 100%.

Group of orthologs #1538. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:143

Q5KP38              	100.00%		H2SG70              	100.00%
Bootstrap support for Q5KP38 as seed ortholog is 100%.
Bootstrap support for H2SG70 as seed ortholog is 100%.

Group of orthologs #1539. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubripes:143

Q5KIC8              	100.00%		H2SZG2              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for H2SZG2 as seed ortholog is 100%.

Group of orthologs #1540. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:30 T.rubripes:86

Q5KAK0              	100.00%		H2RQT0              	100.00%
                    	       		H2TER3              	10.62%
                    	       		H2UJS6              	8.96%
                    	       		H2UJ80              	5.42%
Bootstrap support for Q5KAK0 as seed ortholog is 81%.
Bootstrap support for H2RQT0 as seed ortholog is 99%.

Group of orthologs #1541. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubripes:41

Q5KKY6              	100.00%		H2U2U6              	100.00%
                    	       		H2SAR0              	9.93%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for H2U2U6 as seed ortholog is 90%.

Group of orthologs #1542. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubripes:88

Q5KA76              	100.00%		H2S7V7              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for H2S7V7 as seed ortholog is 99%.

Group of orthologs #1543. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubripes:142

Q5K8Z1              	100.00%		H2SVN9              	100.00%
Bootstrap support for Q5K8Z1 as seed ortholog is 100%.
Bootstrap support for H2SVN9 as seed ortholog is 100%.

Group of orthologs #1544. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubripes:142

Q5KIE3              	100.00%		H2SBS3              	100.00%
Bootstrap support for Q5KIE3 as seed ortholog is 100%.
Bootstrap support for H2SBS3 as seed ortholog is 100%.

Group of orthologs #1545. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubripes:3

Q5KKR2              	100.00%		H2SIZ6              	100.00%
Bootstrap support for Q5KKR2 as seed ortholog is 100%.
Bootstrap support for H2SIZ6 as seed ortholog is 46%.
Alternative seed ortholog is H2SHZ3 (3 bits away from this cluster)

Group of orthologs #1546. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubripes:142

Q5K7S5              	100.00%		H2V2K6              	100.00%
Bootstrap support for Q5K7S5 as seed ortholog is 100%.
Bootstrap support for H2V2K6 as seed ortholog is 100%.

Group of orthologs #1547. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:64

Q5KMS8              	100.00%		H2SJ34              	100.00%
                    	       		H2ULE8              	15.29%
Bootstrap support for Q5KMS8 as seed ortholog is 100%.
Bootstrap support for H2SJ34 as seed ortholog is 99%.

Group of orthologs #1548. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:141

P0CS06              	100.00%		H2SYU2              	100.00%
Bootstrap support for P0CS06 as seed ortholog is 100%.
Bootstrap support for H2SYU2 as seed ortholog is 100%.

Group of orthologs #1549. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:141

Q5KPS3              	100.00%		H2SDM4              	100.00%
Bootstrap support for Q5KPS3 as seed ortholog is 100%.
Bootstrap support for H2SDM4 as seed ortholog is 100%.

Group of orthologs #1550. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:141

Q5K8V6              	100.00%		H2TSP1              	100.00%
Bootstrap support for Q5K8V6 as seed ortholog is 100%.
Bootstrap support for H2TSP1 as seed ortholog is 100%.

Group of orthologs #1551. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:141

Q5KNE0              	100.00%		H2T0K1              	100.00%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for H2T0K1 as seed ortholog is 100%.

Group of orthologs #1552. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:141

P0CR82              	100.00%		H2VA86              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for H2VA86 as seed ortholog is 100%.

Group of orthologs #1553. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubripes:141

Q5KPB0              	100.00%		H2UTN1              	100.00%
Bootstrap support for Q5KPB0 as seed ortholog is 100%.
Bootstrap support for H2UTN1 as seed ortholog is 100%.

Group of orthologs #1554. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:140

Q5KG49              	100.00%		H2U4K4              	100.00%
Q5KG50              	35.18%		H2TBS8              	12.21%
Bootstrap support for Q5KG49 as seed ortholog is 100%.
Bootstrap support for H2U4K4 as seed ortholog is 100%.

Group of orthologs #1555. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:33 T.rubripes:18

Q5KET9              	100.00%		H2USP5              	100.00%
                    	       		H2SJV7              	14.47%
Bootstrap support for Q5KET9 as seed ortholog is 93%.
Bootstrap support for H2USP5 as seed ortholog is 99%.

Group of orthologs #1556. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:4 T.rubripes:140

Q5KFZ5              	100.00%		H2UQ33              	100.00%
Q5KE95              	9.79%		
Bootstrap support for Q5KFZ5 as seed ortholog is 54%.
Alternative seed ortholog is Q5KN13 (4 bits away from this cluster)
Bootstrap support for H2UQ33 as seed ortholog is 100%.

Group of orthologs #1557. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:140

Q5K9X5              	100.00%		H2RSG4              	100.00%
Bootstrap support for Q5K9X5 as seed ortholog is 100%.
Bootstrap support for H2RSG4 as seed ortholog is 100%.

Group of orthologs #1558. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:140

P0CM98              	100.00%		H2SF68              	100.00%
Bootstrap support for P0CM98 as seed ortholog is 100%.
Bootstrap support for H2SF68 as seed ortholog is 100%.

Group of orthologs #1559. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:140

Q5KBJ3              	100.00%		H2TIT3              	100.00%
Bootstrap support for Q5KBJ3 as seed ortholog is 100%.
Bootstrap support for H2TIT3 as seed ortholog is 100%.

Group of orthologs #1560. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:140

Q5KEW4              	100.00%		H2TCD6              	100.00%
Bootstrap support for Q5KEW4 as seed ortholog is 100%.
Bootstrap support for H2TCD6 as seed ortholog is 100%.

Group of orthologs #1561. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubripes:140

Q5KEC8              	100.00%		H2UTE5              	100.00%
Bootstrap support for Q5KEC8 as seed ortholog is 100%.
Bootstrap support for H2UTE5 as seed ortholog is 100%.

Group of orthologs #1562. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:46

Q5KKN1              	100.00%		H2TAH9              	100.00%
                    	       		H2SBK7              	18.01%
                    	       		H2UCP6              	12.64%
                    	       		H2UCK5              	11.88%
Bootstrap support for Q5KKN1 as seed ortholog is 100%.
Bootstrap support for H2TAH9 as seed ortholog is 94%.

Group of orthologs #1563. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

Q5KI23              	100.00%		H2SW49              	100.00%
                    	       		O42387              	87.68%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for H2SW49 as seed ortholog is 100%.

Group of orthologs #1564. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:85

Q5KCA8              	100.00%		H2UCK4              	100.00%
                    	       		H2UZ87              	58.77%
Bootstrap support for Q5KCA8 as seed ortholog is 100%.
Bootstrap support for H2UCK4 as seed ortholog is 99%.

Group of orthologs #1565. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

P0CO84              	100.00%		H2RQ18              	100.00%
Bootstrap support for P0CO84 as seed ortholog is 100%.
Bootstrap support for H2RQ18 as seed ortholog is 100%.

Group of orthologs #1566. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

P0CP72              	100.00%		H2S3S4              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for H2S3S4 as seed ortholog is 100%.

Group of orthologs #1567. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

Q5KHE4              	100.00%		H2RTS6              	100.00%
Bootstrap support for Q5KHE4 as seed ortholog is 100%.
Bootstrap support for H2RTS6 as seed ortholog is 100%.

Group of orthologs #1568. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

Q5KNX7              	100.00%		H2SHE3              	100.00%
Bootstrap support for Q5KNX7 as seed ortholog is 100%.
Bootstrap support for H2SHE3 as seed ortholog is 100%.

Group of orthologs #1569. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubripes:81

Q5K9S7              	100.00%		H2U6J3              	100.00%
Bootstrap support for Q5K9S7 as seed ortholog is 94%.
Bootstrap support for H2U6J3 as seed ortholog is 97%.

Group of orthologs #1570. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

Q5KFQ4              	100.00%		H2TR02              	100.00%
Bootstrap support for Q5KFQ4 as seed ortholog is 100%.
Bootstrap support for H2TR02 as seed ortholog is 100%.

Group of orthologs #1571. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubripes:139

Q5KMC3              	100.00%		H2TMF9              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for H2TMF9 as seed ortholog is 100%.

Group of orthologs #1572. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubripes:54

Q5KIM4              	100.00%		H2V5Q5              	100.00%
                    	       		H2UFI6              	36.64%
Bootstrap support for Q5KIM4 as seed ortholog is 100%.
Bootstrap support for H2V5Q5 as seed ortholog is 83%.

Group of orthologs #1573. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubripes:138

P0CN80              	100.00%		H2UE84              	100.00%
Bootstrap support for P0CN80 as seed ortholog is 100%.
Bootstrap support for H2UE84 as seed ortholog is 100%.

Group of orthologs #1574. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubripes:84

Q5KKE8              	100.00%		H2UCV1              	100.00%
Bootstrap support for Q5KKE8 as seed ortholog is 100%.
Bootstrap support for H2UCV1 as seed ortholog is 99%.

Group of orthologs #1575. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubripes:138

Q5KFD2              	100.00%		H2VBI8              	100.00%
Bootstrap support for Q5KFD2 as seed ortholog is 100%.
Bootstrap support for H2VBI8 as seed ortholog is 100%.

Group of orthologs #1576. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:137

Q5K7D5              	100.00%		H2TDM8              	100.00%
                    	       		H2TI81              	45.76%
Bootstrap support for Q5K7D5 as seed ortholog is 100%.
Bootstrap support for H2TDM8 as seed ortholog is 100%.

Group of orthologs #1577. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:137

Q5K8V4              	100.00%		H2SBK1              	100.00%
Bootstrap support for Q5K8V4 as seed ortholog is 100%.
Bootstrap support for H2SBK1 as seed ortholog is 100%.

Group of orthologs #1578. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:137

Q5KMY6              	100.00%		H2RLN6              	100.00%
Bootstrap support for Q5KMY6 as seed ortholog is 100%.
Bootstrap support for H2RLN6 as seed ortholog is 100%.

Group of orthologs #1579. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:137

Q5KLS8              	100.00%		H2RXS7              	100.00%
Bootstrap support for Q5KLS8 as seed ortholog is 100%.
Bootstrap support for H2RXS7 as seed ortholog is 100%.

Group of orthologs #1580. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:137

Q5K9M8              	100.00%		H2TH10              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for H2TH10 as seed ortholog is 100%.

Group of orthologs #1581. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:87

Q5KEF1              	100.00%		H2TZ33              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 100%.
Bootstrap support for H2TZ33 as seed ortholog is 99%.

Group of orthologs #1582. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubripes:137

Q5KFE4              	100.00%		H2V3B4              	100.00%
Bootstrap support for Q5KFE4 as seed ortholog is 100%.
Bootstrap support for H2V3B4 as seed ortholog is 100%.

Group of orthologs #1583. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubripes:136

Q5K8N7              	100.00%		H2SIT0              	100.00%
                    	       		H2UJC0              	26.52%
                    	       		H2T566              	22.77%
Bootstrap support for Q5K8N7 as seed ortholog is 100%.
Bootstrap support for H2SIT0 as seed ortholog is 100%.

Group of orthologs #1584. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubripes:136

Q5KA72              	100.00%		H2T9R6              	100.00%
                    	       		H2V2C9              	41.49%
                    	       		H2S207              	28.82%
Bootstrap support for Q5KA72 as seed ortholog is 100%.
Bootstrap support for H2T9R6 as seed ortholog is 100%.

Group of orthologs #1585. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:55

Q5KN24              	100.00%		H2UHU4              	100.00%
Q5KN90              	54.72%		
Bootstrap support for Q5KN24 as seed ortholog is 88%.
Bootstrap support for H2UHU4 as seed ortholog is 88%.

Group of orthologs #1586. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubripes:136

Q5KAR1              	100.00%		H2U0T1              	100.00%
Bootstrap support for Q5KAR1 as seed ortholog is 100%.
Bootstrap support for H2U0T1 as seed ortholog is 100%.

Group of orthologs #1587. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubripes:136

Q5K8P8              	100.00%		H2UDU6              	100.00%
Bootstrap support for Q5K8P8 as seed ortholog is 100%.
Bootstrap support for H2UDU6 as seed ortholog is 100%.

Group of orthologs #1588. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubripes:79

Q5KQ08              	100.00%		H2THH1              	100.00%
Bootstrap support for Q5KQ08 as seed ortholog is 100%.
Bootstrap support for H2THH1 as seed ortholog is 98%.

Group of orthologs #1589. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubripes:135

Q5KF71              	100.00%		H2VBQ6              	100.00%
                    	       		H2S0R4              	27.75%
                    	       		H2UJP6              	15.36%
Bootstrap support for Q5KF71 as seed ortholog is 100%.
Bootstrap support for H2VBQ6 as seed ortholog is 100%.

Group of orthologs #1590. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubripes:135

Q5K7A4              	100.00%		H2UU37              	100.00%
                    	       		H2TQ83              	40.98%
Bootstrap support for Q5K7A4 as seed ortholog is 100%.
Bootstrap support for H2UU37 as seed ortholog is 100%.

Group of orthologs #1591. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubripes:135

Q5K8U4              	100.00%		H2UVW6              	100.00%
Bootstrap support for Q5K8U4 as seed ortholog is 100%.
Bootstrap support for H2UVW6 as seed ortholog is 100%.

Group of orthologs #1592. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:27

Q5KIG2              	100.00%		H2RY62              	100.00%
                    	       		H2TPP6              	59.44%
                    	       		H2UGM5              	35.60%
Bootstrap support for Q5KIG2 as seed ortholog is 100%.
Bootstrap support for H2RY62 as seed ortholog is 78%.

Group of orthologs #1593. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KLE1              	100.00%		H2V7P4              	100.00%
                    	       		H2RL53              	72.56%
Bootstrap support for Q5KLE1 as seed ortholog is 100%.
Bootstrap support for H2V7P4 as seed ortholog is 100%.

Group of orthologs #1594. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KCV9              	100.00%		H2S4U4              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for H2S4U4 as seed ortholog is 100%.

Group of orthologs #1595. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5K8J3              	100.00%		H2SYT1              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for H2SYT1 as seed ortholog is 100%.

Group of orthologs #1596. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:78

Q5KFR2              	100.00%		H2SXH2              	100.00%
Bootstrap support for Q5KFR2 as seed ortholog is 100%.
Bootstrap support for H2SXH2 as seed ortholog is 99%.

Group of orthologs #1597. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KBQ4              	100.00%		H2T992              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for H2T992 as seed ortholog is 100%.

Group of orthologs #1598. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KH69              	100.00%		H2U7T8              	100.00%
Bootstrap support for Q5KH69 as seed ortholog is 100%.
Bootstrap support for H2U7T8 as seed ortholog is 100%.

Group of orthologs #1599. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5K847              	100.00%		H2V5D6              	100.00%
Bootstrap support for Q5K847 as seed ortholog is 100%.
Bootstrap support for H2V5D6 as seed ortholog is 100%.

Group of orthologs #1600. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KBX8              	100.00%		H2VDF3              	100.00%
Bootstrap support for Q5KBX8 as seed ortholog is 100%.
Bootstrap support for H2VDF3 as seed ortholog is 100%.

Group of orthologs #1601. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KFB3              	100.00%		H2V6S6              	100.00%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for H2V6S6 as seed ortholog is 100%.

Group of orthologs #1602. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubripes:134

Q5KIB6              	100.00%		H2VDM3              	100.00%
Bootstrap support for Q5KIB6 as seed ortholog is 100%.
Bootstrap support for H2VDM3 as seed ortholog is 100%.

Group of orthologs #1603. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubripes:133

P0CN04              	100.00%		H2T595              	100.00%
                    	       		H2TKK7              	74.39%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for H2T595 as seed ortholog is 100%.

Group of orthologs #1604. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubripes:133

Q5KAJ5              	100.00%		H2UNU1              	100.00%
                    	       		H2V3Q6              	12.09%
Bootstrap support for Q5KAJ5 as seed ortholog is 100%.
Bootstrap support for H2UNU1 as seed ortholog is 100%.

Group of orthologs #1605. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubripes:5

Q5KDD8              	100.00%		H2UWC1              	100.00%
                    	       		H2SY70              	11.23%
Bootstrap support for Q5KDD8 as seed ortholog is 100%.
Bootstrap support for H2UWC1 as seed ortholog is 56%.
Alternative seed ortholog is H2T3D7 (5 bits away from this cluster)

Group of orthologs #1606. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubripes:133

P0CL86              	100.00%		H2SVM5              	100.00%
Bootstrap support for P0CL86 as seed ortholog is 100%.
Bootstrap support for H2SVM5 as seed ortholog is 100%.

Group of orthologs #1607. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubripes:133

Q5KL77              	100.00%		H2SFK4              	100.00%
Bootstrap support for Q5KL77 as seed ortholog is 100%.
Bootstrap support for H2SFK4 as seed ortholog is 100%.

Group of orthologs #1608. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubripes:133

Q5KQ14              	100.00%		H2U1Q4              	100.00%
Bootstrap support for Q5KQ14 as seed ortholog is 100%.
Bootstrap support for H2U1Q4 as seed ortholog is 100%.

Group of orthologs #1609. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:17 T.rubripes:60

Q5KDN6              	100.00%		H2S005              	100.00%
                    	       		H2UWK2              	35.98%
Bootstrap support for Q5KDN6 as seed ortholog is 75%.
Bootstrap support for H2S005 as seed ortholog is 88%.

Group of orthologs #1610. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:132

Q5KD44              	100.00%		H2USJ0              	100.00%
                    	       		H2UY87              	51.69%
Bootstrap support for Q5KD44 as seed ortholog is 100%.
Bootstrap support for H2USJ0 as seed ortholog is 100%.

Group of orthologs #1611. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:132

Q5KDU5              	100.00%		H2RWR0              	100.00%
Bootstrap support for Q5KDU5 as seed ortholog is 100%.
Bootstrap support for H2RWR0 as seed ortholog is 100%.

Group of orthologs #1612. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:132

Q5KMH2              	100.00%		H2S1Q9              	100.00%
Bootstrap support for Q5KMH2 as seed ortholog is 100%.
Bootstrap support for H2S1Q9 as seed ortholog is 100%.

Group of orthologs #1613. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:132

P0CO56              	100.00%		H2V295              	100.00%
Bootstrap support for P0CO56 as seed ortholog is 100%.
Bootstrap support for H2V295 as seed ortholog is 100%.

Group of orthologs #1614. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubripes:132

Q5KF95              	100.00%		H2UNB7              	100.00%
Bootstrap support for Q5KF95 as seed ortholog is 100%.
Bootstrap support for H2UNB7 as seed ortholog is 100%.

Group of orthologs #1615. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:30

Q5KML8              	100.00%		H2STU6              	100.00%
Q5KJT3              	23.33%		H2SRY8              	46.39%
Bootstrap support for Q5KML8 as seed ortholog is 92%.
Bootstrap support for H2STU6 as seed ortholog is 83%.

Group of orthologs #1616. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:67

P0CR60              	100.00%		H2RV62              	100.00%
                    	       		H2TLG1              	61.17%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for H2RV62 as seed ortholog is 99%.

Group of orthologs #1617. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:59

P0CR34              	100.00%		H2UX80              	100.00%
                    	       		H2UY58              	12.87%
Bootstrap support for P0CR34 as seed ortholog is 99%.
Bootstrap support for H2UX80 as seed ortholog is 95%.

Group of orthologs #1618. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:131

P0CL96              	100.00%		H2RYR4              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 100%.
Bootstrap support for H2RYR4 as seed ortholog is 100%.

Group of orthologs #1619. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:131

Q5KA94              	100.00%		H2T0T6              	100.00%
Bootstrap support for Q5KA94 as seed ortholog is 100%.
Bootstrap support for H2T0T6 as seed ortholog is 100%.

Group of orthologs #1620. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:27 T.rubripes:35

Q5KCU7              	100.00%		H2TFJ1              	100.00%
Bootstrap support for Q5KCU7 as seed ortholog is 87%.
Bootstrap support for H2TFJ1 as seed ortholog is 93%.

Group of orthologs #1621. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:131

Q5KBB3              	100.00%		H2TSB9              	100.00%
Bootstrap support for Q5KBB3 as seed ortholog is 100%.
Bootstrap support for H2TSB9 as seed ortholog is 100%.

Group of orthologs #1622. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:31 T.rubripes:131

Q5KCB7              	100.00%		H2TU57              	100.00%
Bootstrap support for Q5KCB7 as seed ortholog is 79%.
Bootstrap support for H2TU57 as seed ortholog is 100%.

Group of orthologs #1623. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:131

Q5KAB9              	100.00%		H2UAE0              	100.00%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for H2UAE0 as seed ortholog is 100%.

Group of orthologs #1624. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:131

Q5KEX5              	100.00%		H2UDE4              	100.00%
Bootstrap support for Q5KEX5 as seed ortholog is 100%.
Bootstrap support for H2UDE4 as seed ortholog is 100%.

Group of orthologs #1625. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:131

Q5KFU2              	100.00%		H2UUY3              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 99%.
Bootstrap support for H2UUY3 as seed ortholog is 100%.

Group of orthologs #1626. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubripes:131

Q5KM29              	100.00%		H2UIN6              	100.00%
Bootstrap support for Q5KM29 as seed ortholog is 100%.
Bootstrap support for H2UIN6 as seed ortholog is 100%.

Group of orthologs #1627. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:14 T.rubripes:131

Q5KKK2              	100.00%		H2UP73              	100.00%
Bootstrap support for Q5KKK2 as seed ortholog is 60%.
Alternative seed ortholog is Q5KFL2 (14 bits away from this cluster)
Bootstrap support for H2UP73 as seed ortholog is 100%.

Group of orthologs #1628. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubripes:51

Q5KK79              	100.00%		H2UU82              	100.00%
                    	       		H2VCQ2              	22.81%
                    	       		H2S661              	17.54%
                    	       		H2UPT7              	15.69%
Bootstrap support for Q5KK79 as seed ortholog is 100%.
Bootstrap support for H2UU82 as seed ortholog is 81%.

Group of orthologs #1629. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubripes:130

Q5KIG9              	100.00%		H2RLY8              	100.00%
Bootstrap support for Q5KIG9 as seed ortholog is 100%.
Bootstrap support for H2RLY8 as seed ortholog is 100%.

Group of orthologs #1630. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubripes:130

Q5KLM7              	100.00%		H2SQ00              	100.00%
Bootstrap support for Q5KLM7 as seed ortholog is 100%.
Bootstrap support for H2SQ00 as seed ortholog is 100%.

Group of orthologs #1631. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubripes:130

Q5KDY6              	100.00%		H2UDE5              	100.00%
Bootstrap support for Q5KDY6 as seed ortholog is 100%.
Bootstrap support for H2UDE5 as seed ortholog is 100%.

Group of orthologs #1632. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubripes:130

Q5KLU4              	100.00%		H2TUD8              	100.00%
Bootstrap support for Q5KLU4 as seed ortholog is 100%.
Bootstrap support for H2TUD8 as seed ortholog is 100%.

Group of orthologs #1633. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubripes:130

Q5KPJ5              	100.00%		H2UST3              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 81%.
Bootstrap support for H2UST3 as seed ortholog is 100%.

Group of orthologs #1634. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KKG2              	100.00%		H2S9P1              	100.00%
Q5KDQ6              	8.33%		
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for H2S9P1 as seed ortholog is 100%.

Group of orthologs #1635. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KFY9              	100.00%		H2TSI4              	100.00%
                    	       		H2SPT0              	17.61%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for H2TSI4 as seed ortholog is 100%.

Group of orthologs #1636. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5K8Z0              	100.00%		H2UJH4              	100.00%
                    	       		H2SMY8              	62.96%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for H2UJH4 as seed ortholog is 100%.

Group of orthologs #1637. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:85

Q5KLG7              	100.00%		H2S3J2              	100.00%
Bootstrap support for Q5KLG7 as seed ortholog is 100%.
Bootstrap support for H2S3J2 as seed ortholog is 100%.

Group of orthologs #1638. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KLK6              	100.00%		H2S6T9              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for H2S6T9 as seed ortholog is 100%.

Group of orthologs #1639. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KAL3              	100.00%		H2UJ59              	100.00%
Bootstrap support for Q5KAL3 as seed ortholog is 100%.
Bootstrap support for H2UJ59 as seed ortholog is 100%.

Group of orthologs #1640. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:23 T.rubripes:7

Q5KMV5              	100.00%		H2TQL5              	100.00%
Bootstrap support for Q5KMV5 as seed ortholog is 74%.
Alternative seed ortholog is Q5KLC5 (23 bits away from this cluster)
Bootstrap support for H2TQL5 as seed ortholog is 55%.
Alternative seed ortholog is H2UZ17 (7 bits away from this cluster)

Group of orthologs #1641. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:78

Q5KDH4              	100.00%		H2UPJ5              	100.00%
Bootstrap support for Q5KDH4 as seed ortholog is 96%.
Bootstrap support for H2UPJ5 as seed ortholog is 98%.

Group of orthologs #1642. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KHF1              	100.00%		H2UYT9              	100.00%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for H2UYT9 as seed ortholog is 100%.

Group of orthologs #1643. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KHF0              	100.00%		H2V4U2              	100.00%
Bootstrap support for Q5KHF0 as seed ortholog is 100%.
Bootstrap support for H2V4U2 as seed ortholog is 100%.

Group of orthologs #1644. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubripes:129

Q5KKG8              	100.00%		H2V1Z9              	100.00%
Bootstrap support for Q5KKG8 as seed ortholog is 100%.
Bootstrap support for H2V1Z9 as seed ortholog is 100%.

Group of orthologs #1645. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:52

Q5KGI3              	100.00%		H2SJH3              	100.00%
                    	       		H2SVS9              	88.94%
                    	       		H2TTN8              	84.96%
                    	       		H2UTQ0              	27.43%
                    	       		H2UZF0              	23.01%
                    	       		H2T8N0              	11.95%
Bootstrap support for Q5KGI3 as seed ortholog is 97%.
Bootstrap support for H2SJH3 as seed ortholog is 96%.

Group of orthologs #1646. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5K9J1              	100.00%		H2T272              	100.00%
                    	       		H2SJ00              	16.94%
Bootstrap support for Q5K9J1 as seed ortholog is 100%.
Bootstrap support for H2T272 as seed ortholog is 100%.

Group of orthologs #1647. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KBW1              	100.00%		H2RLL1              	100.00%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for H2RLL1 as seed ortholog is 100%.

Group of orthologs #1648. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KCA1              	100.00%		H2RTI4              	100.00%
Bootstrap support for Q5KCA1 as seed ortholog is 100%.
Bootstrap support for H2RTI4 as seed ortholog is 100%.

Group of orthologs #1649. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5K7N4              	100.00%		H2SAY0              	100.00%
Bootstrap support for Q5K7N4 as seed ortholog is 100%.
Bootstrap support for H2SAY0 as seed ortholog is 100%.

Group of orthologs #1650. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KBI4              	100.00%		H2STL9              	100.00%
Bootstrap support for Q5KBI4 as seed ortholog is 100%.
Bootstrap support for H2STL9 as seed ortholog is 100%.

Group of orthologs #1651. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KE04              	100.00%		H2SMC7              	100.00%
Bootstrap support for Q5KE04 as seed ortholog is 100%.
Bootstrap support for H2SMC7 as seed ortholog is 100%.

Group of orthologs #1652. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KPP2              	100.00%		H2S484              	100.00%
Bootstrap support for Q5KPP2 as seed ortholog is 100%.
Bootstrap support for H2S484 as seed ortholog is 100%.

Group of orthologs #1653. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KGR8              	100.00%		H2SXU6              	100.00%
Bootstrap support for Q5KGR8 as seed ortholog is 100%.
Bootstrap support for H2SXU6 as seed ortholog is 100%.

Group of orthologs #1654. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KGG8              	100.00%		H2U181              	100.00%
Bootstrap support for Q5KGG8 as seed ortholog is 100%.
Bootstrap support for H2U181 as seed ortholog is 100%.

Group of orthologs #1655. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KB67              	100.00%		H2UK90              	100.00%
Bootstrap support for Q5KB67 as seed ortholog is 100%.
Bootstrap support for H2UK90 as seed ortholog is 100%.

Group of orthologs #1656. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubripes:128

Q5KPH1              	100.00%		H2TQN4              	100.00%
Bootstrap support for Q5KPH1 as seed ortholog is 100%.
Bootstrap support for H2TQN4 as seed ortholog is 100%.

Group of orthologs #1657. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubripes:18

Q5KCD1              	100.00%		H2TYM7              	100.00%
                    	       		H2V8J2              	47.58%
                    	       		H2V8I1              	32.13%
                    	       		H2S7F4              	30.48%
                    	       		H2SVK2              	24.00%
                    	       		H2TZ71              	22.14%
Bootstrap support for Q5KCD1 as seed ortholog is 100%.
Bootstrap support for H2TYM7 as seed ortholog is 65%.
Alternative seed ortholog is H2UZY7 (18 bits away from this cluster)

Group of orthologs #1658. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubripes:127

Q5KI05              	100.00%		H2RNY0              	100.00%
Bootstrap support for Q5KI05 as seed ortholog is 100%.
Bootstrap support for H2RNY0 as seed ortholog is 100%.

Group of orthologs #1659. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubripes:127

Q5KDV9              	100.00%		H2S0L4              	100.00%
Bootstrap support for Q5KDV9 as seed ortholog is 100%.
Bootstrap support for H2S0L4 as seed ortholog is 100%.

Group of orthologs #1660. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubripes:127

Q5KDN0              	100.00%		H2UC23              	100.00%
Bootstrap support for Q5KDN0 as seed ortholog is 100%.
Bootstrap support for H2UC23 as seed ortholog is 100%.

Group of orthologs #1661. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:127

Q5K8Y0              	100.00%		H2UV26              	100.00%
Bootstrap support for Q5K8Y0 as seed ortholog is 96%.
Bootstrap support for H2UV26 as seed ortholog is 100%.

Group of orthologs #1662. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

P0CQ62              	100.00%		H2UTP1              	100.00%
                    	       		H2T8F3              	47.91%
Bootstrap support for P0CQ62 as seed ortholog is 100%.
Bootstrap support for H2UTP1 as seed ortholog is 100%.

Group of orthologs #1663. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

Q5KEK7              	100.00%		H2SDZ5              	100.00%
Bootstrap support for Q5KEK7 as seed ortholog is 100%.
Bootstrap support for H2SDZ5 as seed ortholog is 100%.

Group of orthologs #1664. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

Q5K9C9              	100.00%		H2SYT7              	100.00%
Bootstrap support for Q5K9C9 as seed ortholog is 100%.
Bootstrap support for H2SYT7 as seed ortholog is 100%.

Group of orthologs #1665. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

Q5KEG7              	100.00%		H2TH22              	100.00%
Bootstrap support for Q5KEG7 as seed ortholog is 100%.
Bootstrap support for H2TH22 as seed ortholog is 100%.

Group of orthologs #1666. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

Q5KC44              	100.00%		H2TSH1              	100.00%
Bootstrap support for Q5KC44 as seed ortholog is 100%.
Bootstrap support for H2TSH1 as seed ortholog is 100%.

Group of orthologs #1667. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

Q5K832              	100.00%		H2U900              	100.00%
Bootstrap support for Q5K832 as seed ortholog is 100%.
Bootstrap support for H2U900 as seed ortholog is 100%.

Group of orthologs #1668. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:36

Q5KH55              	100.00%		H2TVB4              	100.00%
Bootstrap support for Q5KH55 as seed ortholog is 100%.
Bootstrap support for H2TVB4 as seed ortholog is 85%.

Group of orthologs #1669. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubripes:126

P0CO50              	100.00%		H2V3E6              	100.00%
Bootstrap support for P0CO50 as seed ortholog is 100%.
Bootstrap support for H2V3E6 as seed ortholog is 100%.

Group of orthologs #1670. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:50

Q5K8L2              	100.00%		H2T512              	100.00%
                    	       		H2TVY8              	31.94%
                    	       		H2UNZ7              	31.58%
                    	       		H2SH67              	31.03%
                    	       		H2RL20              	30.85%
                    	       		H2SFY1              	30.31%
                    	       		H2TPS3              	23.59%
                    	       		H2UW89              	22.69%
                    	       		H2UR11              	18.15%
                    	       		H2SQC4              	11.80%
                    	       		H2TU65              	7.80%
                    	       		H2SLH4              	5.99%
Bootstrap support for Q5K8L2 as seed ortholog is 97%.
Bootstrap support for H2T512 as seed ortholog is 84%.

Group of orthologs #1671. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:23

Q5KF12              	100.00%		H2TE37              	100.00%
                    	       		H2VAN7              	36.86%
                    	       		H2SQL6              	8.45%
                    	       		H2RR36              	8.26%
Bootstrap support for Q5KF12 as seed ortholog is 100%.
Bootstrap support for H2TE37 as seed ortholog is 74%.
Alternative seed ortholog is H2UXV2 (23 bits away from this cluster)

Group of orthologs #1672. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:58

Q5KFF0              	100.00%		H2UYP9              	100.00%
                    	       		H2S8S8              	88.52%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for H2UYP9 as seed ortholog is 99%.

Group of orthologs #1673. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:125

Q5KFI3              	100.00%		H2RRF5              	100.00%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for H2RRF5 as seed ortholog is 100%.

Group of orthologs #1674. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:125

Q5KDN1              	100.00%		H2RYS9              	100.00%
Bootstrap support for Q5KDN1 as seed ortholog is 100%.
Bootstrap support for H2RYS9 as seed ortholog is 100%.

Group of orthologs #1675. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:125

Q5KCA9              	100.00%		H2TF83              	100.00%
Bootstrap support for Q5KCA9 as seed ortholog is 100%.
Bootstrap support for H2TF83 as seed ortholog is 100%.

Group of orthologs #1676. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubripes:125

Q5K8X7              	100.00%		H2UCN4              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for H2UCN4 as seed ortholog is 100%.

Group of orthologs #1677. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubripes:124

P0CN06              	100.00%		H2SL21              	100.00%
                    	       		H2V4I0              	72.44%
                    	       		H2UY28              	7.56%
Bootstrap support for P0CN06 as seed ortholog is 100%.
Bootstrap support for H2SL21 as seed ortholog is 100%.

Group of orthologs #1678. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubripes:124

Q5KJ52              	100.00%		H2UNH9              	100.00%
                    	       		H2TM43              	45.76%
                    	       		H2VBD5              	35.98%
Bootstrap support for Q5KJ52 as seed ortholog is 100%.
Bootstrap support for H2UNH9 as seed ortholog is 100%.

Group of orthologs #1679. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubripes:124

Q5KJZ4              	100.00%		H2RMY7              	100.00%
Bootstrap support for Q5KJZ4 as seed ortholog is 100%.
Bootstrap support for H2RMY7 as seed ortholog is 100%.

Group of orthologs #1680. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubripes:124

Q5KC49              	100.00%		H2UJP8              	100.00%
Bootstrap support for Q5KC49 as seed ortholog is 100%.
Bootstrap support for H2UJP8 as seed ortholog is 100%.

Group of orthologs #1681. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubripes:124

Q5KE19              	100.00%		H2UR05              	100.00%
Bootstrap support for Q5KE19 as seed ortholog is 100%.
Bootstrap support for H2UR05 as seed ortholog is 100%.

Group of orthologs #1682. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubripes:124

Q5KD43              	100.00%		H2UVX4              	100.00%
Bootstrap support for Q5KD43 as seed ortholog is 100%.
Bootstrap support for H2UVX4 as seed ortholog is 100%.

Group of orthologs #1683. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:4

Q5K965              	100.00%		H2TJB0              	100.00%
Q5KC43              	54.73%		H2S9B6              	35.57%
                    	       		H2THI0              	27.73%
                    	       		H2U0V9              	23.27%
                    	       		H2UFE5              	22.47%
                    	       		H2TRI4              	21.08%
                    	       		H2SJX2              	18.48%
                    	       		H2V5Z5              	13.03%
                    	       		H2SA99              	12.83%
                    	       		H2UVT1              	12.10%
Bootstrap support for Q5K965 as seed ortholog is 100%.
Bootstrap support for H2TJB0 as seed ortholog is 44%.
Alternative seed ortholog is H2V8Q2 (4 bits away from this cluster)

Group of orthologs #1684. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:30

Q5KFL8              	100.00%		H2S6X2              	100.00%
Q5KLI6              	7.88%		H2RLX8              	24.07%
                    	       		H2SEU9              	11.77%
Bootstrap support for Q5KFL8 as seed ortholog is 100%.
Bootstrap support for H2S6X2 as seed ortholog is 69%.
Alternative seed ortholog is H2RTK4 (30 bits away from this cluster)

Group of orthologs #1685. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:123

Q5KCU3              	100.00%		H2T7V4              	100.00%
                    	       		H2TM22              	22.46%
                    	       		H2TSP3              	6.50%
Bootstrap support for Q5KCU3 as seed ortholog is 100%.
Bootstrap support for H2T7V4 as seed ortholog is 100%.

Group of orthologs #1686. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubripes:56

Q5KK76              	100.00%		H2SPI9              	100.00%
Q5KDS4              	8.28%		
Bootstrap support for Q5KK76 as seed ortholog is 95%.
Bootstrap support for H2SPI9 as seed ortholog is 97%.

Group of orthologs #1687. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:123

Q5KA82              	100.00%		H2RQN2              	100.00%
Bootstrap support for Q5KA82 as seed ortholog is 100%.
Bootstrap support for H2RQN2 as seed ortholog is 100%.

Group of orthologs #1688. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:123

Q5KE42              	100.00%		H2SB31              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for H2SB31 as seed ortholog is 100%.

Group of orthologs #1689. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:123

Q5KB39              	100.00%		H2U020              	100.00%
Bootstrap support for Q5KB39 as seed ortholog is 100%.
Bootstrap support for H2U020 as seed ortholog is 100%.

Group of orthologs #1690. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubripes:123

Q5KDU6              	100.00%		H2TXE2              	100.00%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for H2TXE2 as seed ortholog is 100%.

Group of orthologs #1691. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:18 T.rubripes:38

Q5KPK3              	100.00%		H2UP77              	100.00%
Bootstrap support for Q5KPK3 as seed ortholog is 76%.
Bootstrap support for H2UP77 as seed ortholog is 98%.

Group of orthologs #1692. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubripes:56

P0CP32              	100.00%		H2TWW5              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for H2TWW5 as seed ortholog is 93%.

Group of orthologs #1693. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubripes:122

Q5KL56              	100.00%		H2VAM2              	100.00%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for H2VAM2 as seed ortholog is 100%.

Group of orthologs #1694. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:24 T.rubripes:121

Q5KAA2              	100.00%		H2TCH1              	100.00%
Q5KLV1              	18.69%		H2U9Q6              	100.00%
                    	       		H2RQ67              	17.34%
                    	       		H2T3J8              	16.04%
                    	       		H2TTV2              	14.47%
                    	       		H2U9Y4              	13.04%
                    	       		H2SUL4              	11.99%
                    	       		H2U4N5              	11.86%
                    	       		E7FKY6              	11.73%
                    	       		H2V0H5              	11.34%
                    	       		H2RVA0              	9.91%
                    	       		H2TNM0              	8.08%
                    	       		H2TUU0              	7.19%
Bootstrap support for Q5KAA2 as seed ortholog is 68%.
Alternative seed ortholog is Q5KEP1 (24 bits away from this cluster)
Bootstrap support for H2TCH1 as seed ortholog is 100%.
Bootstrap support for H2U9Q6 as seed ortholog is 100%.

Group of orthologs #1695. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:45

Q5KA73              	100.00%		H2V8W4              	100.00%
                    	       		H2S5D2              	42.68%
                    	       		H2TZF2              	41.71%
                    	       		H2V3B7              	11.22%
Bootstrap support for Q5KA73 as seed ortholog is 100%.
Bootstrap support for H2V8W4 as seed ortholog is 99%.

Group of orthologs #1696. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KL83              	100.00%		H2TIP6              	100.00%
                    	       		H2UJW4              	100.00%
                    	       		H2UDS2              	53.32%
Bootstrap support for Q5KL83 as seed ortholog is 100%.
Bootstrap support for H2TIP6 as seed ortholog is 100%.
Bootstrap support for H2UJW4 as seed ortholog is 100%.

Group of orthologs #1697. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KL32              	100.00%		H2S9M4              	100.00%
                    	       		H2RKQ7              	83.38%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for H2S9M4 as seed ortholog is 100%.

Group of orthologs #1698. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:48

Q5KMJ1              	100.00%		H2UBE9              	100.00%
                    	       		H2UFJ9              	34.58%
Bootstrap support for Q5KMJ1 as seed ortholog is 100%.
Bootstrap support for H2UBE9 as seed ortholog is 96%.

Group of orthologs #1699. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KME8              	100.00%		H2UW06              	100.00%
                    	       		H2SXL5              	32.83%
Bootstrap support for Q5KME8 as seed ortholog is 100%.
Bootstrap support for H2UW06 as seed ortholog is 100%.

Group of orthologs #1700. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

P0CR18              	100.00%		H2S9R5              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for H2S9R5 as seed ortholog is 100%.

Group of orthologs #1701. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KGC2              	100.00%		H2RPR9              	100.00%
Bootstrap support for Q5KGC2 as seed ortholog is 100%.
Bootstrap support for H2RPR9 as seed ortholog is 100%.

Group of orthologs #1702. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KGZ8              	100.00%		H2SEP0              	100.00%
Bootstrap support for Q5KGZ8 as seed ortholog is 100%.
Bootstrap support for H2SEP0 as seed ortholog is 100%.

Group of orthologs #1703. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KEY6              	100.00%		H2U114              	100.00%
Bootstrap support for Q5KEY6 as seed ortholog is 100%.
Bootstrap support for H2U114 as seed ortholog is 100%.

Group of orthologs #1704. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KEP4              	100.00%		H2UGQ0              	100.00%
Bootstrap support for Q5KEP4 as seed ortholog is 100%.
Bootstrap support for H2UGQ0 as seed ortholog is 100%.

Group of orthologs #1705. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubripes:121

Q5KHC7              	100.00%		H2U9J0              	100.00%
Bootstrap support for Q5KHC7 as seed ortholog is 100%.
Bootstrap support for H2U9J0 as seed ortholog is 100%.

Group of orthologs #1706. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubripes:120

Q5KDG7              	100.00%		H2STZ3              	100.00%
                    	       		H2TLA2              	44.00%
                    	       		H2TET7              	34.00%
                    	       		H2TBQ0              	12.00%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for H2STZ3 as seed ortholog is 100%.

Group of orthologs #1707. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubripes:120

P0CS10              	100.00%		H2RPG6              	100.00%
Bootstrap support for P0CS10 as seed ortholog is 100%.
Bootstrap support for H2RPG6 as seed ortholog is 100%.

Group of orthologs #1708. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubripes:120

Q5KFU9              	100.00%		H2RJ37              	100.00%
Bootstrap support for Q5KFU9 as seed ortholog is 100%.
Bootstrap support for H2RJ37 as seed ortholog is 100%.

Group of orthologs #1709. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubripes:120

Q5KJ00              	100.00%		H2S6C4              	100.00%
Bootstrap support for Q5KJ00 as seed ortholog is 100%.
Bootstrap support for H2S6C4 as seed ortholog is 100%.

Group of orthologs #1710. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubripes:120

Q5KP36              	100.00%		H2UZJ4              	100.00%
Bootstrap support for Q5KP36 as seed ortholog is 100%.
Bootstrap support for H2UZJ4 as seed ortholog is 100%.

Group of orthologs #1711. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:119

Q5KB00              	100.00%		H2RSU2              	100.00%
                    	       		H2UQ05              	24.02%
                    	       		H2RTN7              	10.85%
                    	       		H2U8U4              	9.99%
                    	       		H2SIH3              	8.52%
                    	       		H2TI95              	7.84%
Bootstrap support for Q5KB00 as seed ortholog is 97%.
Bootstrap support for H2RSU2 as seed ortholog is 100%.

Group of orthologs #1712. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubripes:119

Q5K7Y5              	100.00%		H2TLE7              	100.00%
Bootstrap support for Q5K7Y5 as seed ortholog is 100%.
Bootstrap support for H2TLE7 as seed ortholog is 100%.

Group of orthologs #1713. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubripes:119

Q5KDU3              	100.00%		H2V798              	100.00%
Bootstrap support for Q5KDU3 as seed ortholog is 100%.
Bootstrap support for H2V798 as seed ortholog is 100%.

Group of orthologs #1714. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubripes:32

Q5KLT4              	100.00%		H2UK01              	100.00%
Bootstrap support for Q5KLT4 as seed ortholog is 96%.
Bootstrap support for H2UK01 as seed ortholog is 87%.

Group of orthologs #1715. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:33

Q5KMN4              	100.00%		H2TUC4              	100.00%
                    	       		H2TUB9              	67.61%
                    	       		H2RUB2              	66.93%
                    	       		H2UYF3              	58.01%
                    	       		H2RVY5              	57.11%
                    	       		H2VBJ0              	54.18%
                    	       		H2V1Z5              	53.95%
                    	       		H2RKD1              	49.10%
                    	       		H2SUA8              	19.07%
                    	       		H2U4T8              	18.17%
                    	       		H2U8E7              	17.83%
                    	       		H2SIL4              	17.72%
                    	       		H2UBT7              	17.72%
                    	       		H2U9U7              	17.27%
                    	       		H2U416              	17.16%
                    	       		H2V2P8              	16.48%
                    	       		H2S8X6              	13.88%
                    	       		H2VBM3              	12.87%
                    	       		H2SUR6              	12.75%
                    	       		H2TT92              	11.40%
                    	       		H2RTJ6              	11.06%
                    	       		H2U704              	10.95%
                    	       		H2ST45              	10.61%
                    	       		H2SEV0              	10.50%
                    	       		H2SGX2              	9.14%
                    	       		H2TEA8              	7.56%
                    	       		H2S5H1              	7.11%
Bootstrap support for Q5KMN4 as seed ortholog is 100%.
Bootstrap support for H2TUC4 as seed ortholog is 80%.

Group of orthologs #1716. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KEH9              	100.00%		H2S1Z8              	100.00%
                    	       		H2UZB8              	67.77%
                    	       		H2UZ94              	66.17%
Bootstrap support for Q5KEH9 as seed ortholog is 100%.
Bootstrap support for H2S1Z8 as seed ortholog is 100%.

Group of orthologs #1717. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KMM2              	100.00%		H2RSA8              	100.00%
                    	       		H2TCX2              	34.92%
                    	       		H2TU99              	20.03%
Bootstrap support for Q5KMM2 as seed ortholog is 100%.
Bootstrap support for H2RSA8 as seed ortholog is 100%.

Group of orthologs #1718. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KHN0              	100.00%		H2S4R7              	100.00%
                    	       		H2T4K8              	5.67%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for H2S4R7 as seed ortholog is 100%.

Group of orthologs #1719. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KK39              	100.00%		H2SBA3              	100.00%
                    	       		H2TY65              	35.01%
Bootstrap support for Q5KK39 as seed ortholog is 100%.
Bootstrap support for H2SBA3 as seed ortholog is 100%.

Group of orthologs #1720. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:31

Q5KKF3              	100.00%		H2UCK7              	100.00%
                    	       		H2RQ54              	55.81%
Bootstrap support for Q5KKF3 as seed ortholog is 100%.
Bootstrap support for H2UCK7 as seed ortholog is 78%.

Group of orthologs #1721. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

P0CS64              	100.00%		H2S796              	100.00%
Bootstrap support for P0CS64 as seed ortholog is 100%.
Bootstrap support for H2S796 as seed ortholog is 100%.

Group of orthologs #1722. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

P0CR68              	100.00%		H2SP98              	100.00%
Bootstrap support for P0CR68 as seed ortholog is 100%.
Bootstrap support for H2SP98 as seed ortholog is 100%.

Group of orthologs #1723. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KIC9              	100.00%		H2RVL7              	100.00%
Bootstrap support for Q5KIC9 as seed ortholog is 100%.
Bootstrap support for H2RVL7 as seed ortholog is 100%.

Group of orthologs #1724. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KGL5              	100.00%		H2S097              	100.00%
Bootstrap support for Q5KGL5 as seed ortholog is 100%.
Bootstrap support for H2S097 as seed ortholog is 100%.

Group of orthologs #1725. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:74

Q5KKU9              	100.00%		H2RXF0              	100.00%
Bootstrap support for Q5KKU9 as seed ortholog is 100%.
Bootstrap support for H2RXF0 as seed ortholog is 100%.

Group of orthologs #1726. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KPJ3              	100.00%		H2RSX1              	100.00%
Bootstrap support for Q5KPJ3 as seed ortholog is 100%.
Bootstrap support for H2RSX1 as seed ortholog is 100%.

Group of orthologs #1727. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KBR9              	100.00%		H2T7W9              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for H2T7W9 as seed ortholog is 100%.

Group of orthologs #1728. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubripes:118

Q5KL84              	100.00%		H2TV40              	100.00%
Bootstrap support for Q5KL84 as seed ortholog is 100%.
Bootstrap support for H2TV40 as seed ortholog is 100%.

Group of orthologs #1729. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:51

Q5KA03              	100.00%		H2U7K7              	100.00%
Q5KPE0              	17.96%		H2U4B0              	38.22%
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for H2U7K7 as seed ortholog is 89%.

Group of orthologs #1730. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5KLD3              	100.00%		H2RV40              	100.00%
                    	       		H2TNV7              	58.44%
Bootstrap support for Q5KLD3 as seed ortholog is 100%.
Bootstrap support for H2RV40 as seed ortholog is 100%.

Group of orthologs #1731. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5KJE8              	100.00%		H2S3N8              	100.00%
                    	       		H2UNN2              	19.93%
Bootstrap support for Q5KJE8 as seed ortholog is 100%.
Bootstrap support for H2S3N8 as seed ortholog is 100%.

Group of orthologs #1732. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5K9H3              	100.00%		H2UCP4              	100.00%
                    	       		H2TMC4              	40.44%
Bootstrap support for Q5K9H3 as seed ortholog is 100%.
Bootstrap support for H2UCP4 as seed ortholog is 100%.

Group of orthologs #1733. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5KF06              	100.00%		H2TXF3              	100.00%
                    	       		H2U4U7              	42.16%
Bootstrap support for Q5KF06 as seed ortholog is 100%.
Bootstrap support for H2TXF3 as seed ortholog is 100%.

Group of orthologs #1734. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5KCG2              	100.00%		H2UMM0              	100.00%
                    	       		H2SU14              	6.35%
Bootstrap support for Q5KCG2 as seed ortholog is 100%.
Bootstrap support for H2UMM0 as seed ortholog is 100%.

Group of orthologs #1735. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:117

Q5KPV0              	100.00%		H2UCR8              	100.00%
                    	       		H2TML2              	10.61%
Bootstrap support for Q5KPV0 as seed ortholog is 95%.
Bootstrap support for H2UCR8 as seed ortholog is 100%.

Group of orthologs #1736. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5KNW5              	100.00%		H2V4P8              	100.00%
                    	       		H2TKG6              	47.63%
Bootstrap support for Q5KNW5 as seed ortholog is 100%.
Bootstrap support for H2V4P8 as seed ortholog is 100%.

Group of orthologs #1737. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubripes:117

Q5KNI7              	100.00%		H2SJI9              	100.00%
Bootstrap support for Q5KNI7 as seed ortholog is 100%.
Bootstrap support for H2SJI9 as seed ortholog is 100%.

Group of orthologs #1738. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:69

Q5KCS6              	100.00%		H2RUP4              	100.00%
                    	       		H2SJZ6              	41.55%
                    	       		H2SSW6              	41.03%
                    	       		H2TMG5              	26.21%
                    	       		H2SUW1              	12.76%
Bootstrap support for Q5KCS6 as seed ortholog is 96%.
Bootstrap support for H2RUP4 as seed ortholog is 99%.

Group of orthologs #1739. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubripes:49

Q5KMQ6              	100.00%		H2VA90              	100.00%
                    	       		H2VCX6              	53.50%
                    	       		H2UIK3              	24.37%
                    	       		H2RJW4              	23.53%
                    	       		H2SFA7              	14.57%
Bootstrap support for Q5KMQ6 as seed ortholog is 72%.
Alternative seed ortholog is Q5KG86 (19 bits away from this cluster)
Bootstrap support for H2VA90 as seed ortholog is 92%.

Group of orthologs #1740. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

Q5KFN4              	100.00%		H2UCQ7              	100.00%
                    	       		H2TY90              	18.45%
                    	       		H2RPF3              	10.16%
Bootstrap support for Q5KFN4 as seed ortholog is 100%.
Bootstrap support for H2UCQ7 as seed ortholog is 100%.

Group of orthologs #1741. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:48

Q5KER1              	100.00%		H2UTK9              	100.00%
                    	       		H2RU85              	52.77%
                    	       		H2TGP4              	5.86%
Bootstrap support for Q5KER1 as seed ortholog is 100%.
Bootstrap support for H2UTK9 as seed ortholog is 97%.

Group of orthologs #1742. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

Q5KLK0              	100.00%		H2RVH9              	100.00%
                    	       		H2U6Z0              	6.69%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for H2RVH9 as seed ortholog is 100%.

Group of orthologs #1743. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

Q5KD61              	100.00%		H2SSR2              	100.00%
Bootstrap support for Q5KD61 as seed ortholog is 100%.
Bootstrap support for H2SSR2 as seed ortholog is 100%.

Group of orthologs #1744. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

P0CP62              	100.00%		H2UBX8              	100.00%
Bootstrap support for P0CP62 as seed ortholog is 100%.
Bootstrap support for H2UBX8 as seed ortholog is 100%.

Group of orthologs #1745. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

Q5KMD5              	100.00%		H2TQ15              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for H2TQ15 as seed ortholog is 100%.

Group of orthologs #1746. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

Q5KA95              	100.00%		H2UP49              	100.00%
Bootstrap support for Q5KA95 as seed ortholog is 100%.
Bootstrap support for H2UP49 as seed ortholog is 100%.

Group of orthologs #1747. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubripes:116

Q5K7B2              	100.00%		H2V715              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for H2V715 as seed ortholog is 100%.

Group of orthologs #1748. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:39 T.rubripes:116

Q5KJG2              	100.00%		H2UYG5              	100.00%
Bootstrap support for Q5KJG2 as seed ortholog is 84%.
Bootstrap support for H2UYG5 as seed ortholog is 100%.

Group of orthologs #1749. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubripes:115

P0CN72              	100.00%		H2TQY4              	100.00%
                    	       		Q90515              	79.08%
                    	       		H2VCA4              	35.38%
Bootstrap support for P0CN72 as seed ortholog is 99%.
Bootstrap support for H2TQY4 as seed ortholog is 100%.

Group of orthologs #1750. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:115

Q5KH59              	100.00%		H2SAP8              	100.00%
Bootstrap support for Q5KH59 as seed ortholog is 100%.
Bootstrap support for H2SAP8 as seed ortholog is 100%.

Group of orthologs #1751. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:69

Q5KJW6              	100.00%		H2SPJ3              	100.00%
Bootstrap support for Q5KJW6 as seed ortholog is 100%.
Bootstrap support for H2SPJ3 as seed ortholog is 99%.

Group of orthologs #1752. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:115

Q5KIN8              	100.00%		H2SYQ1              	100.00%
Bootstrap support for Q5KIN8 as seed ortholog is 100%.
Bootstrap support for H2SYQ1 as seed ortholog is 100%.

Group of orthologs #1753. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:115

Q5KH04              	100.00%		H2T739              	100.00%
Bootstrap support for Q5KH04 as seed ortholog is 100%.
Bootstrap support for H2T739 as seed ortholog is 100%.

Group of orthologs #1754. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubripes:115

Q5KMZ5              	100.00%		H2UYI3              	100.00%
Bootstrap support for Q5KMZ5 as seed ortholog is 100%.
Bootstrap support for H2UYI3 as seed ortholog is 100%.

Group of orthologs #1755. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KIH9              	100.00%		H2TZT6              	100.00%
                    	       		H2USN6              	28.49%
Bootstrap support for Q5KIH9 as seed ortholog is 100%.
Bootstrap support for H2TZT6 as seed ortholog is 100%.

Group of orthologs #1756. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:7 T.rubripes:114

Q5KD47              	100.00%		H2SUC4              	100.00%
Bootstrap support for Q5KD47 as seed ortholog is 72%.
Alternative seed ortholog is Q5KEG9 (7 bits away from this cluster)
Bootstrap support for H2SUC4 as seed ortholog is 100%.

Group of orthologs #1757. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KPA5              	100.00%		H2S162              	100.00%
Bootstrap support for Q5KPA5 as seed ortholog is 100%.
Bootstrap support for H2S162 as seed ortholog is 100%.

Group of orthologs #1758. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KNF1              	100.00%		H2TJ50              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for H2TJ50 as seed ortholog is 100%.

Group of orthologs #1759. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KME4              	100.00%		H2TUB5              	100.00%
Bootstrap support for Q5KME4 as seed ortholog is 100%.
Bootstrap support for H2TUB5 as seed ortholog is 100%.

Group of orthologs #1760. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KPL4              	100.00%		H2TUD6              	100.00%
Bootstrap support for Q5KPL4 as seed ortholog is 100%.
Bootstrap support for H2TUD6 as seed ortholog is 100%.

Group of orthologs #1761. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KI04              	100.00%		H2UKJ6              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for H2UKJ6 as seed ortholog is 100%.

Group of orthologs #1762. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KIE8              	100.00%		H2UMQ7              	100.00%
Bootstrap support for Q5KIE8 as seed ortholog is 100%.
Bootstrap support for H2UMQ7 as seed ortholog is 100%.

Group of orthologs #1763. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KBV9              	100.00%		H2V9P6              	100.00%
Bootstrap support for Q5KBV9 as seed ortholog is 100%.
Bootstrap support for H2V9P6 as seed ortholog is 100%.

Group of orthologs #1764. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KAL4              	100.00%		H2VEV5              	100.00%
Bootstrap support for Q5KAL4 as seed ortholog is 100%.
Bootstrap support for H2VEV5 as seed ortholog is 100%.

Group of orthologs #1765. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KCY0              	100.00%		H2VE81              	100.00%
Bootstrap support for Q5KCY0 as seed ortholog is 100%.
Bootstrap support for H2VE81 as seed ortholog is 100%.

Group of orthologs #1766. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubripes:114

Q5KL25              	100.00%		H2V2X7              	100.00%
Bootstrap support for Q5KL25 as seed ortholog is 100%.
Bootstrap support for H2V2X7 as seed ortholog is 100%.

Group of orthologs #1767. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:38 T.rubripes:56

Q5KMM3              	100.00%		H2V6M7              	100.00%
Bootstrap support for Q5KMM3 as seed ortholog is 82%.
Bootstrap support for H2V6M7 as seed ortholog is 93%.

Group of orthologs #1768. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:17

Q5KLH7              	100.00%		H2T2D2              	100.00%
                    	       		H2UMI2              	52.58%
Bootstrap support for Q5KLH7 as seed ortholog is 100%.
Bootstrap support for H2T2D2 as seed ortholog is 60%.
Alternative seed ortholog is H2TIP9 (17 bits away from this cluster)

Group of orthologs #1769. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5K8E1              	100.00%		H2UE46              	100.00%
                    	       		H2V2M5              	29.63%
Bootstrap support for Q5K8E1 as seed ortholog is 100%.
Bootstrap support for H2UE46 as seed ortholog is 100%.

Group of orthologs #1770. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

P0CP06              	100.00%		H2RZL0              	100.00%
Bootstrap support for P0CP06 as seed ortholog is 100%.
Bootstrap support for H2RZL0 as seed ortholog is 100%.

Group of orthologs #1771. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5KEI7              	100.00%		H2S0M3              	100.00%
Bootstrap support for Q5KEI7 as seed ortholog is 100%.
Bootstrap support for H2S0M3 as seed ortholog is 100%.

Group of orthologs #1772. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5KIE2              	100.00%		H2RXM4              	100.00%
Bootstrap support for Q5KIE2 as seed ortholog is 100%.
Bootstrap support for H2RXM4 as seed ortholog is 100%.

Group of orthologs #1773. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:37 T.rubripes:16

Q5KAP0              	100.00%		H2T1W2              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 89%.
Bootstrap support for H2T1W2 as seed ortholog is 69%.
Alternative seed ortholog is H2TDD4 (16 bits away from this cluster)

Group of orthologs #1774. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5KAA6              	100.00%		H2TB87              	100.00%
Bootstrap support for Q5KAA6 as seed ortholog is 100%.
Bootstrap support for H2TB87 as seed ortholog is 100%.

Group of orthologs #1775. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5KDF4              	100.00%		H2T3M5              	100.00%
Bootstrap support for Q5KDF4 as seed ortholog is 100%.
Bootstrap support for H2T3M5 as seed ortholog is 100%.

Group of orthologs #1776. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5KN25              	100.00%		H2SQU6              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for H2SQU6 as seed ortholog is 100%.

Group of orthologs #1777. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:2

Q5KLA0              	100.00%		H2T280              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for H2T280 as seed ortholog is 61%.
Alternative seed ortholog is H2TMV7 (2 bits away from this cluster)

Group of orthologs #1778. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

Q5KMD8              	100.00%		H2TJ53              	100.00%
Bootstrap support for Q5KMD8 as seed ortholog is 100%.
Bootstrap support for H2TJ53 as seed ortholog is 100%.

Group of orthologs #1779. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubripes:113

P0CQ30              	100.00%		H2VBX6              	100.00%
Bootstrap support for P0CQ30 as seed ortholog is 100%.
Bootstrap support for H2VBX6 as seed ortholog is 100%.

Group of orthologs #1780. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

Q5K9B3              	100.00%		H2TC32              	100.00%
                    	       		H2SNI2              	17.16%
                    	       		H2SYQ3              	5.67%
Bootstrap support for Q5K9B3 as seed ortholog is 100%.
Bootstrap support for H2TC32 as seed ortholog is 100%.

Group of orthologs #1781. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

Q5KLW5              	100.00%		H2T3U2              	100.00%
                    	       		Q8UW48              	66.87%
Bootstrap support for Q5KLW5 as seed ortholog is 100%.
Bootstrap support for H2T3U2 as seed ortholog is 100%.

Group of orthologs #1782. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

Q5KP16              	100.00%		H2RM93              	100.00%
Bootstrap support for Q5KP16 as seed ortholog is 100%.
Bootstrap support for H2RM93 as seed ortholog is 100%.

Group of orthologs #1783. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:51

Q5KL97              	100.00%		H2RXA3              	100.00%
Bootstrap support for Q5KL97 as seed ortholog is 100%.
Bootstrap support for H2RXA3 as seed ortholog is 90%.

Group of orthologs #1784. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

Q5KNT2              	100.00%		H2SJ04              	100.00%
Bootstrap support for Q5KNT2 as seed ortholog is 100%.
Bootstrap support for H2SJ04 as seed ortholog is 100%.

Group of orthologs #1785. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

P0CS68              	100.00%		H2U6U0              	100.00%
Bootstrap support for P0CS68 as seed ortholog is 100%.
Bootstrap support for H2U6U0 as seed ortholog is 100%.

Group of orthologs #1786. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

Q5KCS0              	100.00%		H2V781              	100.00%
Bootstrap support for Q5KCS0 as seed ortholog is 100%.
Bootstrap support for H2V781 as seed ortholog is 100%.

Group of orthologs #1787. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubripes:112

Q5KLZ3              	100.00%		H2V0T6              	100.00%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for H2V0T6 as seed ortholog is 100%.

Group of orthologs #1788. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:38 T.rubripes:111

Q5KCX6              	100.00%		H2TX31              	100.00%
                    	       		H2RYC6              	45.50%
                    	       		H2UE91              	38.29%
                    	       		H2T603              	33.11%
                    	       		H2TV55              	23.87%
                    	       		H2RTR6              	6.31%
                    	       		H2SUW0              	5.63%
Bootstrap support for Q5KCX6 as seed ortholog is 89%.
Bootstrap support for H2TX31 as seed ortholog is 100%.

Group of orthologs #1789. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubripes:111

Q5KFL4              	100.00%		H2SRZ8              	100.00%
                    	       		H2SXP5              	39.56%
                    	       		H2SVF1              	38.24%
                    	       		H2RSW4              	33.49%
Bootstrap support for Q5KFL4 as seed ortholog is 100%.
Bootstrap support for H2SRZ8 as seed ortholog is 100%.

Group of orthologs #1790. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubripes:111

Q5KF63              	100.00%		H2RMX7              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for H2RMX7 as seed ortholog is 100%.

Group of orthologs #1791. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:21

P0CR62              	100.00%		H2SUU3              	100.00%
                    	       		H2RSH0              	24.56%
Bootstrap support for P0CR62 as seed ortholog is 100%.
Bootstrap support for H2SUU3 as seed ortholog is 77%.

Group of orthologs #1792. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:110

Q5KGY5              	100.00%		H2RMD1              	100.00%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for H2RMD1 as seed ortholog is 100%.

Group of orthologs #1793. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:29

Q5KF26              	100.00%		H2T1E9              	100.00%
Bootstrap support for Q5KF26 as seed ortholog is 94%.
Bootstrap support for H2T1E9 as seed ortholog is 93%.

Group of orthologs #1794. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:56

Q5KP48              	100.00%		H2SCN0              	100.00%
Bootstrap support for Q5KP48 as seed ortholog is 100%.
Bootstrap support for H2SCN0 as seed ortholog is 96%.

Group of orthologs #1795. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:110

Q5KCX5              	100.00%		H2TAT9              	100.00%
Bootstrap support for Q5KCX5 as seed ortholog is 100%.
Bootstrap support for H2TAT9 as seed ortholog is 100%.

Group of orthologs #1796. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:110

Q5KI17              	100.00%		H2SWL2              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for H2SWL2 as seed ortholog is 100%.

Group of orthologs #1797. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubripes:110

Q5KL70              	100.00%		H2TJ88              	100.00%
Bootstrap support for Q5KL70 as seed ortholog is 100%.
Bootstrap support for H2TJ88 as seed ortholog is 100%.

Group of orthologs #1798. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubripes:110

Q5K6X0              	100.00%		H2V5E9              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 99%.
Bootstrap support for H2V5E9 as seed ortholog is 100%.

Group of orthologs #1799. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:3 T.rubripes:109

Q5KDM8              	100.00%		H2SL37              	100.00%
Q5KDM5              	100.00%		H2UQ43              	100.00%
                    	       		H2UJX0              	100.00%
Bootstrap support for Q5KDM8 as seed ortholog is 42%.
Alternative seed ortholog is Q5KEW7 (3 bits away from this cluster)
Bootstrap support for Q5KDM5 as seed ortholog is 57%.
Alternative seed ortholog is Q5KEW7 (3 bits away from this cluster)
Bootstrap support for H2SL37 as seed ortholog is 100%.
Bootstrap support for H2UQ43 as seed ortholog is 100%.
Bootstrap support for H2UJX0 as seed ortholog is 100%.

Group of orthologs #1800. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:17

Q5KH12              	100.00%		H2U9C4              	100.00%
                    	       		H2TEG0              	43.58%
                    	       		H2U8N3              	42.09%
                    	       		H2TCP2              	31.27%
Bootstrap support for Q5KH12 as seed ortholog is 100%.
Bootstrap support for H2U9C4 as seed ortholog is 68%.
Alternative seed ortholog is H2U7J2 (17 bits away from this cluster)

Group of orthologs #1801. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:8 T.rubripes:109

Q5KNX2              	100.00%		H2SQL9              	100.00%
Q5KLY3              	56.16%		
Q5KC39              	7.96%		
Bootstrap support for Q5KNX2 as seed ortholog is 51%.
Alternative seed ortholog is Q5KK20 (8 bits away from this cluster)
Bootstrap support for H2SQL9 as seed ortholog is 100%.

Group of orthologs #1802. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:109

Q5KH48              	100.00%		H2RT87              	100.00%
                    	       		H2TLF1              	9.74%
Bootstrap support for Q5KH48 as seed ortholog is 100%.
Bootstrap support for H2RT87 as seed ortholog is 100%.

Group of orthologs #1803. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:109

Q5KGW6              	100.00%		H2SZR4              	100.00%
Q5KI76              	100.00%		
Bootstrap support for Q5KGW6 as seed ortholog is 100%.
Bootstrap support for Q5KI76 as seed ortholog is 100%.
Bootstrap support for H2SZR4 as seed ortholog is 100%.

Group of orthologs #1804. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:109

Q5KBR8              	100.00%		H2RRT3              	100.00%
Bootstrap support for Q5KBR8 as seed ortholog is 100%.
Bootstrap support for H2RRT3 as seed ortholog is 100%.

Group of orthologs #1805. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:109

Q5KJW8              	100.00%		H2U993              	100.00%
Bootstrap support for Q5KJW8 as seed ortholog is 99%.
Bootstrap support for H2U993 as seed ortholog is 100%.

Group of orthologs #1806. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:109

Q5KD03              	100.00%		H2V447              	100.00%
Bootstrap support for Q5KD03 as seed ortholog is 100%.
Bootstrap support for H2V447 as seed ortholog is 100%.

Group of orthologs #1807. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:109

Q5KLP7              	100.00%		H2VEI3              	100.00%
Bootstrap support for Q5KLP7 as seed ortholog is 100%.
Bootstrap support for H2VEI3 as seed ortholog is 100%.

Group of orthologs #1808. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubripes:109

Q5KPW1              	100.00%		H2VAT1              	100.00%
Bootstrap support for Q5KPW1 as seed ortholog is 100%.
Bootstrap support for H2VAT1 as seed ortholog is 100%.

Group of orthologs #1809. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:37 T.rubripes:32

Q5KK19              	100.00%		H2U0E0              	100.00%
                    	       		H2SXW0              	37.16%
                    	       		H2RSE0              	26.75%
                    	       		H2T1N2              	18.05%
Bootstrap support for Q5KK19 as seed ortholog is 83%.
Bootstrap support for H2U0E0 as seed ortholog is 74%.
Alternative seed ortholog is H2UW15 (32 bits away from this cluster)

Group of orthologs #1810. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubripes:108

Q5KF51              	100.00%		H2UJA7              	100.00%
                    	       		H2UXL2              	7.27%
                    	       		H2V9M1              	5.86%
Bootstrap support for Q5KF51 as seed ortholog is 100%.
Bootstrap support for H2UJA7 as seed ortholog is 100%.

Group of orthologs #1811. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:41 T.rubripes:108

Q5KMB4              	100.00%		H2RNK5              	100.00%
Bootstrap support for Q5KMB4 as seed ortholog is 99%.
Bootstrap support for H2RNK5 as seed ortholog is 100%.

Group of orthologs #1812. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:36 T.rubripes:108

Q5KK58              	100.00%		H2S633              	100.00%
Bootstrap support for Q5KK58 as seed ortholog is 86%.
Bootstrap support for H2S633 as seed ortholog is 100%.

Group of orthologs #1813. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubripes:108

Q5K8K6              	100.00%		H2T9P0              	100.00%
Bootstrap support for Q5K8K6 as seed ortholog is 100%.
Bootstrap support for H2T9P0 as seed ortholog is 100%.

Group of orthologs #1814. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubripes:108

Q5KNG8              	100.00%		H2TFU1              	100.00%
Bootstrap support for Q5KNG8 as seed ortholog is 100%.
Bootstrap support for H2TFU1 as seed ortholog is 100%.

Group of orthologs #1815. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubripes:108

Q5KMK5              	100.00%		H2TV02              	100.00%
Bootstrap support for Q5KMK5 as seed ortholog is 100%.
Bootstrap support for H2TV02 as seed ortholog is 100%.

Group of orthologs #1816. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubripes:108

Q5KE85              	100.00%		H2UR40              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for H2UR40 as seed ortholog is 100%.

Group of orthologs #1817. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5KJH4              	100.00%		H2RLB1              	100.00%
Q5KJH3              	14.01%		
Bootstrap support for Q5KJH4 as seed ortholog is 100%.
Bootstrap support for H2RLB1 as seed ortholog is 100%.

Group of orthologs #1818. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:33

Q5KJM2              	100.00%		H2V431              	100.00%
                    	       		H2TA89              	63.71%
Bootstrap support for Q5KJM2 as seed ortholog is 100%.
Bootstrap support for H2V431 as seed ortholog is 83%.

Group of orthologs #1819. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5K9B4              	100.00%		H2RK32              	100.00%
Bootstrap support for Q5K9B4 as seed ortholog is 100%.
Bootstrap support for H2RK32 as seed ortholog is 100%.

Group of orthologs #1820. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:50

Q5KEB8              	100.00%		H2S1T2              	100.00%
Bootstrap support for Q5KEB8 as seed ortholog is 100%.
Bootstrap support for H2S1T2 as seed ortholog is 98%.

Group of orthologs #1821. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5KFG9              	100.00%		H2S7F0              	100.00%
Bootstrap support for Q5KFG9 as seed ortholog is 100%.
Bootstrap support for H2S7F0 as seed ortholog is 100%.

Group of orthologs #1822. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5KPG4              	100.00%		H2SQM8              	100.00%
Bootstrap support for Q5KPG4 as seed ortholog is 100%.
Bootstrap support for H2SQM8 as seed ortholog is 100%.

Group of orthologs #1823. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

P0CM52              	100.00%		H2UG01              	100.00%
Bootstrap support for P0CM52 as seed ortholog is 100%.
Bootstrap support for H2UG01 as seed ortholog is 100%.

Group of orthologs #1824. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5KIE5              	100.00%		H2UZZ9              	100.00%
Bootstrap support for Q5KIE5 as seed ortholog is 100%.
Bootstrap support for H2UZZ9 as seed ortholog is 100%.

Group of orthologs #1825. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5KL82              	100.00%		H2VC23              	100.00%
Bootstrap support for Q5KL82 as seed ortholog is 100%.
Bootstrap support for H2VC23 as seed ortholog is 100%.

Group of orthologs #1826. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubripes:107

Q5KMM9              	100.00%		H2V8V0              	100.00%
Bootstrap support for Q5KMM9 as seed ortholog is 100%.
Bootstrap support for H2V8V0 as seed ortholog is 100%.

Group of orthologs #1827. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:106

Q5KHM2              	100.00%		H2SW79              	100.00%
                    	       		H2SXI8              	71.91%
                    	       		H2RWM5              	71.35%
                    	       		H2SRS9              	65.86%
                    	       		H2S7P1              	48.84%
                    	       		H2TG93              	42.33%
                    	       		H2V098              	39.35%
Bootstrap support for Q5KHM2 as seed ortholog is 100%.
Bootstrap support for H2SW79 as seed ortholog is 100%.

Group of orthologs #1828. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:106

Q5KBU2              	100.00%		H2RJJ4              	100.00%
                    	       		H2TKI4              	100.00%
                    	       		H2S6L8              	57.83%
                    	       		H2TYU7              	47.13%
                    	       		H2UKA8              	32.56%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for H2RJJ4 as seed ortholog is 100%.
Bootstrap support for H2TKI4 as seed ortholog is 100%.

Group of orthologs #1829. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:106

Q5K845              	100.00%		H2S563              	100.00%
Bootstrap support for Q5K845 as seed ortholog is 100%.
Bootstrap support for H2S563 as seed ortholog is 100%.

Group of orthologs #1830. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubripes:106

Q5KL09              	100.00%		H2RPM2              	100.00%
Bootstrap support for Q5KL09 as seed ortholog is 86%.
Bootstrap support for H2RPM2 as seed ortholog is 100%.

Group of orthologs #1831. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:106

Q5KC00              	100.00%		H2T8G7              	100.00%
Bootstrap support for Q5KC00 as seed ortholog is 100%.
Bootstrap support for H2T8G7 as seed ortholog is 100%.

Group of orthologs #1832. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:54

Q5K6X4              	100.00%		H2U4U8              	100.00%
Bootstrap support for Q5K6X4 as seed ortholog is 100%.
Bootstrap support for H2U4U8 as seed ortholog is 85%.

Group of orthologs #1833. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubripes:106

Q5KB06              	100.00%		H2UHV9              	100.00%
Bootstrap support for Q5KB06 as seed ortholog is 100%.
Bootstrap support for H2UHV9 as seed ortholog is 100%.

Group of orthologs #1834. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubripes:105

Q5K7T5              	100.00%		H2SCM1              	100.00%
Bootstrap support for Q5K7T5 as seed ortholog is 100%.
Bootstrap support for H2SCM1 as seed ortholog is 100%.

Group of orthologs #1835. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:38 T.rubripes:20

P0CQ38              	100.00%		H2U051              	100.00%
Bootstrap support for P0CQ38 as seed ortholog is 90%.
Bootstrap support for H2U051 as seed ortholog is 78%.

Group of orthologs #1836. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubripes:105

P0CR58              	100.00%		H2UF07              	100.00%
Bootstrap support for P0CR58 as seed ortholog is 100%.
Bootstrap support for H2UF07 as seed ortholog is 100%.

Group of orthologs #1837. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubripes:105

Q5KHL3              	100.00%		H2TT15              	100.00%
Bootstrap support for Q5KHL3 as seed ortholog is 100%.
Bootstrap support for H2TT15 as seed ortholog is 100%.

Group of orthologs #1838. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubripes:42

Q5KM51              	100.00%		H2UJT9              	100.00%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for H2UJT9 as seed ortholog is 85%.

Group of orthologs #1839. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:5 T.rubripes:45

Q5KDS1              	100.00%		H2V7S4              	100.00%
Q5KCB6              	72.55%		
Q5KKB5              	41.39%		
Bootstrap support for Q5KDS1 as seed ortholog is 56%.
Alternative seed ortholog is Q5KIP0 (5 bits away from this cluster)
Bootstrap support for H2V7S4 as seed ortholog is 90%.

Group of orthologs #1840. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubripes:104

P0CM10              	100.00%		H2S2C4              	100.00%
Bootstrap support for P0CM10 as seed ortholog is 100%.
Bootstrap support for H2S2C4 as seed ortholog is 100%.

Group of orthologs #1841. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubripes:104

Q5KNL8              	100.00%		H2SFH0              	100.00%
Bootstrap support for Q5KNL8 as seed ortholog is 100%.
Bootstrap support for H2SFH0 as seed ortholog is 100%.

Group of orthologs #1842. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubripes:104

Q5KPN0              	100.00%		H2SV51              	100.00%
Bootstrap support for Q5KPN0 as seed ortholog is 100%.
Bootstrap support for H2SV51 as seed ortholog is 100%.

Group of orthologs #1843. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubripes:104

Q5K6X6              	100.00%		H2V483              	100.00%
Bootstrap support for Q5K6X6 as seed ortholog is 100%.
Bootstrap support for H2V483 as seed ortholog is 100%.

Group of orthologs #1844. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubripes:47

Q5KMP1              	100.00%		H2UJG6              	100.00%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for H2UJG6 as seed ortholog is 95%.

Group of orthologs #1845. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubripes:51

Q5K973              	100.00%		H2UAL1              	100.00%
                    	       		H2UN66              	59.18%
Bootstrap support for Q5K973 as seed ortholog is 100%.
Bootstrap support for H2UAL1 as seed ortholog is 97%.

Group of orthologs #1846. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubripes:103

Q5KKF6              	100.00%		H2S8N8              	100.00%
Bootstrap support for Q5KKF6 as seed ortholog is 100%.
Bootstrap support for H2S8N8 as seed ortholog is 100%.

Group of orthologs #1847. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubripes:103

Q5K865              	100.00%		H2U4K1              	100.00%
Bootstrap support for Q5K865 as seed ortholog is 100%.
Bootstrap support for H2U4K1 as seed ortholog is 100%.

Group of orthologs #1848. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubripes:103

Q5KMS2              	100.00%		H2V520              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for H2V520 as seed ortholog is 100%.

Group of orthologs #1849. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5K6Y2              	100.00%		H2S8M6              	100.00%
                    	       		H2U5Z6              	80.19%
                    	       		H2UID0              	78.77%
Bootstrap support for Q5K6Y2 as seed ortholog is 100%.
Bootstrap support for H2S8M6 as seed ortholog is 100%.

Group of orthologs #1850. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:4

Q5KHB8              	100.00%		H2RRX0              	100.00%
Q5K7D6              	15.05%		H2RNF9              	25.55%
Bootstrap support for Q5KHB8 as seed ortholog is 100%.
Bootstrap support for H2RRX0 as seed ortholog is 55%.
Alternative seed ortholog is H2VBV2 (4 bits away from this cluster)

Group of orthologs #1851. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KGB9              	100.00%		H2T0E1              	100.00%
                    	       		H2SJW3              	41.38%
Bootstrap support for Q5KGB9 as seed ortholog is 100%.
Bootstrap support for H2T0E1 as seed ortholog is 100%.

Group of orthologs #1852. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubripes:25

Q5KQ41              	100.00%		H2TZW5              	100.00%
                    	       		H2S5N1              	36.20%
Bootstrap support for Q5KQ41 as seed ortholog is 80%.
Bootstrap support for H2TZW5 as seed ortholog is 80%.

Group of orthologs #1853. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KKD6              	100.00%		H2SM01              	100.00%
Bootstrap support for Q5KKD6 as seed ortholog is 100%.
Bootstrap support for H2SM01 as seed ortholog is 100%.

Group of orthologs #1854. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KIV2              	100.00%		H2T3A0              	100.00%
Bootstrap support for Q5KIV2 as seed ortholog is 100%.
Bootstrap support for H2T3A0 as seed ortholog is 100%.

Group of orthologs #1855. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KHR8              	100.00%		H2T9K6              	100.00%
Bootstrap support for Q5KHR8 as seed ortholog is 100%.
Bootstrap support for H2T9K6 as seed ortholog is 100%.

Group of orthologs #1856. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KL91              	100.00%		H2T7P4              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for H2T7P4 as seed ortholog is 100%.

Group of orthologs #1857. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KFL5              	100.00%		H2UXZ6              	100.00%
Bootstrap support for Q5KFL5 as seed ortholog is 100%.
Bootstrap support for H2UXZ6 as seed ortholog is 100%.

Group of orthologs #1858. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubripes:102

Q5KL55              	100.00%		H2VCR1              	100.00%
Bootstrap support for Q5KL55 as seed ortholog is 100%.
Bootstrap support for H2VCR1 as seed ortholog is 100%.

Group of orthologs #1859. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:101

Q5K970              	100.00%		H2SML1              	100.00%
                    	       		H2SYV0              	41.69%
Bootstrap support for Q5K970 as seed ortholog is 100%.
Bootstrap support for H2SML1 as seed ortholog is 100%.

Group of orthologs #1860. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:12 T.rubripes:10

Q5KGY3              	100.00%		H2UUR0              	100.00%
                    	       		H2RTC7              	35.53%
Bootstrap support for Q5KGY3 as seed ortholog is 46%.
Alternative seed ortholog is Q5KN75 (12 bits away from this cluster)
Bootstrap support for H2UUR0 as seed ortholog is 55%.
Alternative seed ortholog is H2SKE6 (10 bits away from this cluster)

Group of orthologs #1861. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:101

Q5KHN6              	100.00%		H2UYL6              	100.00%
                    	       		H2S204              	7.66%
Bootstrap support for Q5KHN6 as seed ortholog is 100%.
Bootstrap support for H2UYL6 as seed ortholog is 100%.

Group of orthologs #1862. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:54

Q5KB94              	100.00%		H2S6W4              	100.00%
Bootstrap support for Q5KB94 as seed ortholog is 100%.
Bootstrap support for H2S6W4 as seed ortholog is 97%.

Group of orthologs #1863. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:101

Q5KPU2              	100.00%		H2SA69              	100.00%
Bootstrap support for Q5KPU2 as seed ortholog is 100%.
Bootstrap support for H2SA69 as seed ortholog is 100%.

Group of orthologs #1864. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:101

Q5KC98              	100.00%		H2UQ13              	100.00%
Bootstrap support for Q5KC98 as seed ortholog is 100%.
Bootstrap support for H2UQ13 as seed ortholog is 100%.

Group of orthologs #1865. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:17

Q5KLV2              	100.00%		H2ULM3              	100.00%
Bootstrap support for Q5KLV2 as seed ortholog is 100%.
Bootstrap support for H2ULM3 as seed ortholog is 56%.
Alternative seed ortholog is H2SDZ4 (17 bits away from this cluster)

Group of orthologs #1866. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubripes:101

Q5KJS9              	100.00%		H2UUY8              	100.00%
Bootstrap support for Q5KJS9 as seed ortholog is 100%.
Bootstrap support for H2UUY8 as seed ortholog is 100%.

Group of orthologs #1867. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KDF9              	100.00%		H2UN74              	100.00%
Q5KQ97              	18.84%		H2TGU3              	7.96%
                    	       		H2U852              	6.12%
Bootstrap support for Q5KDF9 as seed ortholog is 100%.
Bootstrap support for H2UN74 as seed ortholog is 100%.

Group of orthologs #1868. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KG76              	100.00%		H2UGA0              	100.00%
                    	       		H2V5I2              	52.09%
                    	       		H2SQG5              	37.35%
Bootstrap support for Q5KG76 as seed ortholog is 100%.
Bootstrap support for H2UGA0 as seed ortholog is 100%.

Group of orthologs #1869. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KJM9              	100.00%		H2UYR3              	100.00%
                    	       		H2UMQ9              	26.59%
                    	       		H2SE53              	13.89%
Bootstrap support for Q5KJM9 as seed ortholog is 100%.
Bootstrap support for H2UYR3 as seed ortholog is 100%.

Group of orthologs #1870. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:46

Q5KKK4              	100.00%		H2SLS8              	100.00%
                    	       		H2SLX1              	36.71%
Bootstrap support for Q5KKK4 as seed ortholog is 100%.
Bootstrap support for H2SLS8 as seed ortholog is 87%.

Group of orthologs #1871. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KCS9              	100.00%		H2S7W9              	100.00%
Bootstrap support for Q5KCS9 as seed ortholog is 100%.
Bootstrap support for H2S7W9 as seed ortholog is 100%.

Group of orthologs #1872. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KA93              	100.00%		H2SPA9              	100.00%
Bootstrap support for Q5KA93 as seed ortholog is 100%.
Bootstrap support for H2SPA9 as seed ortholog is 100%.

Group of orthologs #1873. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

P0CO30              	100.00%		H2TB80              	100.00%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for H2TB80 as seed ortholog is 100%.

Group of orthologs #1874. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KBR2              	100.00%		H2TLX3              	100.00%
Bootstrap support for Q5KBR2 as seed ortholog is 100%.
Bootstrap support for H2TLX3 as seed ortholog is 100%.

Group of orthologs #1875. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KPD3              	100.00%		H2SWN7              	100.00%
Bootstrap support for Q5KPD3 as seed ortholog is 100%.
Bootstrap support for H2SWN7 as seed ortholog is 100%.

Group of orthologs #1876. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5K7B9              	100.00%		H2UFQ4              	100.00%
Bootstrap support for Q5K7B9 as seed ortholog is 100%.
Bootstrap support for H2UFQ4 as seed ortholog is 100%.

Group of orthologs #1877. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:40 T.rubripes:100

Q5KHN8              	100.00%		H2UP57              	100.00%
Bootstrap support for Q5KHN8 as seed ortholog is 71%.
Alternative seed ortholog is P0CM60 (40 bits away from this cluster)
Bootstrap support for H2UP57 as seed ortholog is 100%.

Group of orthologs #1878. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:26

Q5KGT2              	100.00%		H2V937              	100.00%
Bootstrap support for Q5KGT2 as seed ortholog is 100%.
Bootstrap support for H2V937 as seed ortholog is 64%.
Alternative seed ortholog is H2SHS8 (26 bits away from this cluster)

Group of orthologs #1879. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubripes:100

Q5KPG0              	100.00%		H2USB5              	100.00%
Bootstrap support for Q5KPG0 as seed ortholog is 100%.
Bootstrap support for H2USB5 as seed ortholog is 100%.

Group of orthologs #1880. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5K9D0              	100.00%		H2UBH6              	100.00%
                    	       		H2RML2              	45.52%
                    	       		H2RPX6              	41.29%
Bootstrap support for Q5K9D0 as seed ortholog is 100%.
Bootstrap support for H2UBH6 as seed ortholog is 100%.

Group of orthologs #1881. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:33

P0CN16              	100.00%		H2UW42              	100.00%
                    	       		H2TSA8              	48.12%
                    	       		H2TRE6              	46.42%
Bootstrap support for P0CN16 as seed ortholog is 100%.
Bootstrap support for H2UW42 as seed ortholog is 90%.

Group of orthologs #1882. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:14 T.rubripes:99

Q5KFH1              	100.00%		H2SEY0              	100.00%
                    	       		H2UIR1              	19.58%
Bootstrap support for Q5KFH1 as seed ortholog is 53%.
Alternative seed ortholog is Q5KEI5 (14 bits away from this cluster)
Bootstrap support for H2SEY0 as seed ortholog is 100%.

Group of orthologs #1883. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

P0CM68              	100.00%		H2TMU1              	100.00%
                    	       		H2TDR6              	48.08%
Bootstrap support for P0CM68 as seed ortholog is 100%.
Bootstrap support for H2TMU1 as seed ortholog is 100%.

Group of orthologs #1884. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KKA7              	100.00%		H2SRC4              	100.00%
Q5KKA8              	40.29%		
Bootstrap support for Q5KKA7 as seed ortholog is 100%.
Bootstrap support for H2SRC4 as seed ortholog is 100%.

Group of orthologs #1885. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5K811              	100.00%		H2U605              	100.00%
                    	       		H2TZ92              	39.77%
Bootstrap support for Q5K811 as seed ortholog is 100%.
Bootstrap support for H2U605 as seed ortholog is 100%.

Group of orthologs #1886. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KBD5              	100.00%		H2RJL2              	100.00%
Bootstrap support for Q5KBD5 as seed ortholog is 100%.
Bootstrap support for H2RJL2 as seed ortholog is 100%.

Group of orthologs #1887. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5K8A9              	100.00%		H2S402              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 100%.
Bootstrap support for H2S402 as seed ortholog is 100%.

Group of orthologs #1888. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KGD0              	100.00%		H2RQ25              	100.00%
Bootstrap support for Q5KGD0 as seed ortholog is 100%.
Bootstrap support for H2RQ25 as seed ortholog is 100%.

Group of orthologs #1889. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5K786              	100.00%		H2T633              	100.00%
Bootstrap support for Q5K786 as seed ortholog is 100%.
Bootstrap support for H2T633 as seed ortholog is 100%.

Group of orthologs #1890. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5K7I7              	100.00%		H2TES6              	100.00%
Bootstrap support for Q5K7I7 as seed ortholog is 100%.
Bootstrap support for H2TES6 as seed ortholog is 100%.

Group of orthologs #1891. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

P0CO34              	100.00%		H2TJ91              	100.00%
Bootstrap support for P0CO34 as seed ortholog is 100%.
Bootstrap support for H2TJ91 as seed ortholog is 100%.

Group of orthologs #1892. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KAA8              	100.00%		H2TV87              	100.00%
Bootstrap support for Q5KAA8 as seed ortholog is 100%.
Bootstrap support for H2TV87 as seed ortholog is 100%.

Group of orthologs #1893. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KG27              	100.00%		H2TQV6              	100.00%
Bootstrap support for Q5KG27 as seed ortholog is 100%.
Bootstrap support for H2TQV6 as seed ortholog is 100%.

Group of orthologs #1894. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KEZ3              	100.00%		H2U3E2              	100.00%
Bootstrap support for Q5KEZ3 as seed ortholog is 100%.
Bootstrap support for H2U3E2 as seed ortholog is 100%.

Group of orthologs #1895. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubripes:99

Q5KPA8              	100.00%		H2UIQ3              	100.00%
Bootstrap support for Q5KPA8 as seed ortholog is 100%.
Bootstrap support for H2UIQ3 as seed ortholog is 100%.

Group of orthologs #1896. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubripes:98

P0CM92              	100.00%		H2T9M5              	100.00%
                    	       		H2TP92              	49.51%
                    	       		H2RX40              	48.76%
                    	       		H2SM77              	12.81%
Bootstrap support for P0CM92 as seed ortholog is 100%.
Bootstrap support for H2T9M5 as seed ortholog is 100%.

Group of orthologs #1897. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubripes:98

Q5K9N9              	100.00%		H2S924              	100.00%
Bootstrap support for Q5K9N9 as seed ortholog is 100%.
Bootstrap support for H2S924 as seed ortholog is 100%.

Group of orthologs #1898. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubripes:98

P0CN70              	100.00%		H2UQF5              	100.00%
Bootstrap support for P0CN70 as seed ortholog is 100%.
Bootstrap support for H2UQF5 as seed ortholog is 100%.

Group of orthologs #1899. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubripes:98

Q5KMF3              	100.00%		H2TYP7              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 100%.
Bootstrap support for H2TYP7 as seed ortholog is 100%.

Group of orthologs #1900. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:20 T.rubripes:98

Q5KLF1              	100.00%		H2UMU8              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 82%.
Bootstrap support for H2UMU8 as seed ortholog is 100%.

Group of orthologs #1901. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubripes:97

Q5K753              	100.00%		H2VA00              	100.00%
Bootstrap support for Q5K753 as seed ortholog is 100%.
Bootstrap support for H2VA00 as seed ortholog is 100%.

Group of orthologs #1902. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubripes:97

Q5KFH7              	100.00%		H2UVJ5              	100.00%
Bootstrap support for Q5KFH7 as seed ortholog is 100%.
Bootstrap support for H2UVJ5 as seed ortholog is 100%.

Group of orthologs #1903. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubripes:97

Q5KLZ6              	100.00%		H2UST0              	100.00%
Bootstrap support for Q5KLZ6 as seed ortholog is 100%.
Bootstrap support for H2UST0 as seed ortholog is 100%.

Group of orthologs #1904. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5KE06              	100.00%		H2TY00              	100.00%
                    	       		H2VC13              	39.41%
                    	       		H2UC06              	39.08%
                    	       		H2UZ85              	34.32%
                    	       		H2SPP3              	20.03%
                    	       		H2VC83              	17.90%
Bootstrap support for Q5KE06 as seed ortholog is 100%.
Bootstrap support for H2TY00 as seed ortholog is 100%.

Group of orthologs #1905. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:11

Q5KLB1              	100.00%		H2RRQ4              	100.00%
                    	       		H2SEY8              	40.48%
                    	       		H2UDJ0              	40.04%
                    	       		H2V7N2              	34.14%
                    	       		H2UNL7              	25.60%
Bootstrap support for Q5KLB1 as seed ortholog is 100%.
Bootstrap support for H2RRQ4 as seed ortholog is 61%.
Alternative seed ortholog is H2TA75 (11 bits away from this cluster)

Group of orthologs #1906. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5K8B5              	100.00%		H2UVV1              	100.00%
                    	       		H2V608              	38.34%
Bootstrap support for Q5K8B5 as seed ortholog is 100%.
Bootstrap support for H2UVV1 as seed ortholog is 100%.

Group of orthologs #1907. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

P0CP40              	100.00%		H2RWG4              	100.00%
Bootstrap support for P0CP40 as seed ortholog is 100%.
Bootstrap support for H2RWG4 as seed ortholog is 100%.

Group of orthologs #1908. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5K8Z9              	100.00%		H2S1W9              	100.00%
Bootstrap support for Q5K8Z9 as seed ortholog is 100%.
Bootstrap support for H2S1W9 as seed ortholog is 100%.

Group of orthologs #1909. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5K8A6              	100.00%		H2SUJ7              	100.00%
Bootstrap support for Q5K8A6 as seed ortholog is 100%.
Bootstrap support for H2SUJ7 as seed ortholog is 100%.

Group of orthologs #1910. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5KPA4              	100.00%		H2RVY7              	100.00%
Bootstrap support for Q5KPA4 as seed ortholog is 100%.
Bootstrap support for H2RVY7 as seed ortholog is 100%.

Group of orthologs #1911. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5KBI3              	100.00%		H2U1B2              	100.00%
Bootstrap support for Q5KBI3 as seed ortholog is 100%.
Bootstrap support for H2U1B2 as seed ortholog is 100%.

Group of orthologs #1912. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubripes:96

Q5KC58              	100.00%		O57593              	100.00%
Bootstrap support for Q5KC58 as seed ortholog is 100%.
Bootstrap support for O57593 as seed ortholog is 100%.

Group of orthologs #1913. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5KEC6              	100.00%		H2T3Q3              	100.00%
                    	       		H2UP33              	28.71%
                    	       		H2U6G2              	11.67%
Bootstrap support for Q5KEC6 as seed ortholog is 100%.
Bootstrap support for H2T3Q3 as seed ortholog is 100%.

Group of orthologs #1914. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5KE07              	100.00%		H2T7A0              	100.00%
                    	       		H2SSC5              	13.97%
Bootstrap support for Q5KE07 as seed ortholog is 100%.
Bootstrap support for H2T7A0 as seed ortholog is 100%.

Group of orthologs #1915. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5KN02              	100.00%		H2VCX3              	100.00%
                    	       		O57594              	100.00%
Bootstrap support for Q5KN02 as seed ortholog is 100%.
Bootstrap support for H2VCX3 as seed ortholog is 100%.
Bootstrap support for O57594 as seed ortholog is 100%.

Group of orthologs #1916. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

P0CM18              	100.00%		H2T4D9              	100.00%
Bootstrap support for P0CM18 as seed ortholog is 100%.
Bootstrap support for H2T4D9 as seed ortholog is 100%.

Group of orthologs #1917. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

P0CO38              	100.00%		H2T4X9              	100.00%
Bootstrap support for P0CO38 as seed ortholog is 100%.
Bootstrap support for H2T4X9 as seed ortholog is 100%.

Group of orthologs #1918. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5K7Y3              	100.00%		H2T089              	100.00%
Bootstrap support for Q5K7Y3 as seed ortholog is 100%.
Bootstrap support for H2T089 as seed ortholog is 100%.

Group of orthologs #1919. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5KEE1              	100.00%		H2SIK7              	100.00%
Bootstrap support for Q5KEE1 as seed ortholog is 100%.
Bootstrap support for H2SIK7 as seed ortholog is 100%.

Group of orthologs #1920. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5KIT8              	100.00%		H2SGL9              	100.00%
Bootstrap support for Q5KIT8 as seed ortholog is 100%.
Bootstrap support for H2SGL9 as seed ortholog is 100%.

Group of orthologs #1921. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5K9X2              	100.00%		H2T9Q9              	100.00%
Bootstrap support for Q5K9X2 as seed ortholog is 100%.
Bootstrap support for H2T9Q9 as seed ortholog is 100%.

Group of orthologs #1922. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5K9E5              	100.00%		H2TFK2              	100.00%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for H2TFK2 as seed ortholog is 100%.

Group of orthologs #1923. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubripes:95

Q5KKY4              	100.00%		H2U9W3              	100.00%
Bootstrap support for Q5KKY4 as seed ortholog is 100%.
Bootstrap support for H2U9W3 as seed ortholog is 100%.

Group of orthologs #1924. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5K734              	100.00%		H2S849              	100.00%
                    	       		H2TEZ3              	38.10%
                    	       		H2TYV6              	36.19%
Bootstrap support for Q5K734 as seed ortholog is 100%.
Bootstrap support for H2S849 as seed ortholog is 100%.

Group of orthologs #1925. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KE31              	100.00%		H2RQ17              	100.00%
Q5KB15              	27.57%		
Bootstrap support for Q5KE31 as seed ortholog is 100%.
Bootstrap support for H2RQ17 as seed ortholog is 100%.

Group of orthologs #1926. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KHA7              	100.00%		H2TRA9              	100.00%
                    	       		H2UN83              	59.44%
Bootstrap support for Q5KHA7 as seed ortholog is 100%.
Bootstrap support for H2TRA9 as seed ortholog is 100%.

Group of orthologs #1927. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KJY3              	100.00%		H2TJD6              	100.00%
                    	       		H2UQJ9              	32.65%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for H2TJD6 as seed ortholog is 100%.

Group of orthologs #1928. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:12

Q5KIQ8              	100.00%		H2UA08              	100.00%
                    	       		H2RIW2              	8.14%
Bootstrap support for Q5KIQ8 as seed ortholog is 100%.
Bootstrap support for H2UA08 as seed ortholog is 56%.
Alternative seed ortholog is H2S848 (12 bits away from this cluster)

Group of orthologs #1929. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KEW3              	100.00%		H2SFU8              	100.00%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for H2SFU8 as seed ortholog is 100%.

Group of orthologs #1930. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5K8Y4              	100.00%		H2T8A9              	100.00%
Bootstrap support for Q5K8Y4 as seed ortholog is 100%.
Bootstrap support for H2T8A9 as seed ortholog is 100%.

Group of orthologs #1931. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KBB0              	100.00%		H2T1U5              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for H2T1U5 as seed ortholog is 100%.

Group of orthologs #1932. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KBG4              	100.00%		H2T2K8              	100.00%
Bootstrap support for Q5KBG4 as seed ortholog is 100%.
Bootstrap support for H2T2K8 as seed ortholog is 100%.

Group of orthologs #1933. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KH20              	100.00%		H2SQV6              	100.00%
Bootstrap support for Q5KH20 as seed ortholog is 100%.
Bootstrap support for H2SQV6 as seed ortholog is 100%.

Group of orthologs #1934. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KDG2              	100.00%		H2TK04              	100.00%
Bootstrap support for Q5KDG2 as seed ortholog is 100%.
Bootstrap support for H2TK04 as seed ortholog is 100%.

Group of orthologs #1935. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KA70              	100.00%		H2UEV4              	100.00%
Bootstrap support for Q5KA70 as seed ortholog is 100%.
Bootstrap support for H2UEV4 as seed ortholog is 100%.

Group of orthologs #1936. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KID6              	100.00%		H2TXY5              	100.00%
Bootstrap support for Q5KID6 as seed ortholog is 100%.
Bootstrap support for H2TXY5 as seed ortholog is 100%.

Group of orthologs #1937. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

P0CM86              	100.00%		H2V434              	100.00%
Bootstrap support for P0CM86 as seed ortholog is 100%.
Bootstrap support for H2V434 as seed ortholog is 100%.

Group of orthologs #1938. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KJ18              	100.00%		H2U5T7              	100.00%
Bootstrap support for Q5KJ18 as seed ortholog is 100%.
Bootstrap support for H2U5T7 as seed ortholog is 100%.

Group of orthologs #1939. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:94

Q5KCT8              	100.00%		H2UYQ1              	100.00%
Bootstrap support for Q5KCT8 as seed ortholog is 100%.
Bootstrap support for H2UYQ1 as seed ortholog is 100%.

Group of orthologs #1940. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubripes:13

Q5KD71              	100.00%		H2UZ20              	100.00%
Bootstrap support for Q5KD71 as seed ortholog is 100%.
Bootstrap support for H2UZ20 as seed ortholog is 85%.

Group of orthologs #1941. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubripes:35

Q5KQ37              	100.00%		H2SEU1              	100.00%
                    	       		H2U911              	28.29%
                    	       		H2TMI9              	7.53%
                    	       		H2S5J2              	7.09%
                    	       		H2RQ42              	6.80%
                    	       		H2SRD0              	6.07%
                    	       		H2SBM0              	5.34%
                    	       		H2V9J7              	5.34%
                    	       		H2SG58              	5.34%
                    	       		H2UQP6              	5.19%
Bootstrap support for Q5KQ37 as seed ortholog is 100%.
Bootstrap support for H2SEU1 as seed ortholog is 57%.
Alternative seed ortholog is H2SEB5 (35 bits away from this cluster)

Group of orthologs #1942. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubripes:93

Q5K7J2              	100.00%		H2V1S3              	100.00%
                    	       		H2UCH9              	29.10%
                    	       		H2V9D4              	18.26%
Bootstrap support for Q5K7J2 as seed ortholog is 100%.
Bootstrap support for H2V1S3 as seed ortholog is 100%.

Group of orthologs #1943. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubripes:93

P0CN54              	100.00%		H2TGE7              	100.00%
Bootstrap support for P0CN54 as seed ortholog is 100%.
Bootstrap support for H2TGE7 as seed ortholog is 100%.

Group of orthologs #1944. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubripes:93

Q5KKF2              	100.00%		H2SVC8              	100.00%
Bootstrap support for Q5KKF2 as seed ortholog is 100%.
Bootstrap support for H2SVC8 as seed ortholog is 100%.

Group of orthologs #1945. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubripes:93

Q5K7N6              	100.00%		H2V081              	100.00%
Bootstrap support for Q5K7N6 as seed ortholog is 100%.
Bootstrap support for H2V081 as seed ortholog is 100%.

Group of orthologs #1946. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5KB50              	100.00%		H2SDB5              	100.00%
                    	       		H2UYE6              	24.46%
Bootstrap support for Q5KB50 as seed ortholog is 100%.
Bootstrap support for H2SDB5 as seed ortholog is 100%.

Group of orthologs #1947. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5KAN8              	100.00%		H2UHF4              	100.00%
Q5KP67              	6.80%		
Bootstrap support for Q5KAN8 as seed ortholog is 100%.
Bootstrap support for H2UHF4 as seed ortholog is 100%.

Group of orthologs #1948. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5K8W3              	100.00%		H2RPM0              	100.00%
Bootstrap support for Q5K8W3 as seed ortholog is 100%.
Bootstrap support for H2RPM0 as seed ortholog is 100%.

Group of orthologs #1949. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5KPM7              	100.00%		H2SD72              	100.00%
Bootstrap support for Q5KPM7 as seed ortholog is 100%.
Bootstrap support for H2SD72 as seed ortholog is 100%.

Group of orthologs #1950. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5KDJ5              	100.00%		H2TMJ5              	100.00%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for H2TMJ5 as seed ortholog is 100%.

Group of orthologs #1951. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:7

P0CR64              	100.00%		H2UBP0              	100.00%
Bootstrap support for P0CR64 as seed ortholog is 100%.
Bootstrap support for H2UBP0 as seed ortholog is 84%.

Group of orthologs #1952. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5K900              	100.00%		H2U6A6              	100.00%
Bootstrap support for Q5K900 as seed ortholog is 100%.
Bootstrap support for H2U6A6 as seed ortholog is 100%.

Group of orthologs #1953. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5KKH4              	100.00%		H2TMA7              	100.00%
Bootstrap support for Q5KKH4 as seed ortholog is 100%.
Bootstrap support for H2TMA7 as seed ortholog is 100%.

Group of orthologs #1954. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubripes:92

Q5KP20              	100.00%		H2VAL8              	100.00%
Bootstrap support for Q5KP20 as seed ortholog is 100%.
Bootstrap support for H2VAL8 as seed ortholog is 100%.

Group of orthologs #1955. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:34

Q5KHA3              	100.00%		H2UJ79              	100.00%
                    	       		H2SY60              	53.69%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for H2UJ79 as seed ortholog is 84%.

Group of orthologs #1956. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KC84              	100.00%		H2RVQ3              	100.00%
Bootstrap support for Q5KC84 as seed ortholog is 100%.
Bootstrap support for H2RVQ3 as seed ortholog is 100%.

Group of orthologs #1957. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

P0CS74              	100.00%		H2SEF7              	100.00%
Bootstrap support for P0CS74 as seed ortholog is 100%.
Bootstrap support for H2SEF7 as seed ortholog is 100%.

Group of orthologs #1958. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KMJ0              	100.00%		H2RIZ6              	100.00%
Bootstrap support for Q5KMJ0 as seed ortholog is 100%.
Bootstrap support for H2RIZ6 as seed ortholog is 100%.

Group of orthologs #1959. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KBL5              	100.00%		H2SP30              	100.00%
Bootstrap support for Q5KBL5 as seed ortholog is 100%.
Bootstrap support for H2SP30 as seed ortholog is 100%.

Group of orthologs #1960. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KLG3              	100.00%		H2S0H4              	100.00%
Bootstrap support for Q5KLG3 as seed ortholog is 100%.
Bootstrap support for H2S0H4 as seed ortholog is 100%.

Group of orthologs #1961. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KAG7              	100.00%		H2SVR6              	100.00%
Bootstrap support for Q5KAG7 as seed ortholog is 100%.
Bootstrap support for H2SVR6 as seed ortholog is 100%.

Group of orthologs #1962. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KE91              	100.00%		H2SW05              	100.00%
Bootstrap support for Q5KE91 as seed ortholog is 100%.
Bootstrap support for H2SW05 as seed ortholog is 100%.

Group of orthologs #1963. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:47

Q5K7H9              	100.00%		H2TI52              	100.00%
Bootstrap support for Q5K7H9 as seed ortholog is 100%.
Bootstrap support for H2TI52 as seed ortholog is 90%.

Group of orthologs #1964. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5K8R9              	100.00%		H2TFX3              	100.00%
Bootstrap support for Q5K8R9 as seed ortholog is 100%.
Bootstrap support for H2TFX3 as seed ortholog is 100%.

Group of orthologs #1965. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KF35              	100.00%		H2T9N2              	100.00%
Bootstrap support for Q5KF35 as seed ortholog is 100%.
Bootstrap support for H2T9N2 as seed ortholog is 100%.

Group of orthologs #1966. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

P0CR24              	100.00%		H2UJ68              	100.00%
Bootstrap support for P0CR24 as seed ortholog is 100%.
Bootstrap support for H2UJ68 as seed ortholog is 100%.

Group of orthologs #1967. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5K6Y4              	100.00%		H2UPD0              	100.00%
Bootstrap support for Q5K6Y4 as seed ortholog is 100%.
Bootstrap support for H2UPD0 as seed ortholog is 100%.

Group of orthologs #1968. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:16 T.rubripes:49

Q5K825              	100.00%		H2UR32              	100.00%
Bootstrap support for Q5K825 as seed ortholog is 68%.
Alternative seed ortholog is Q5K978 (16 bits away from this cluster)
Bootstrap support for H2UR32 as seed ortholog is 89%.

Group of orthologs #1969. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KM36              	100.00%		H2TXE1              	100.00%
Bootstrap support for Q5KM36 as seed ortholog is 100%.
Bootstrap support for H2TXE1 as seed ortholog is 100%.

Group of orthologs #1970. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubripes:91

Q5KP66              	100.00%		H2V9Z8              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for H2V9Z8 as seed ortholog is 100%.

Group of orthologs #1971. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubripes:90

Q5KFN0              	100.00%		H2SFJ5              	100.00%
                    	       		O73688              	99.56%
                    	       		H2SXN5              	28.67%
Bootstrap support for Q5KFN0 as seed ortholog is 100%.
Bootstrap support for H2SFJ5 as seed ortholog is 100%.

Group of orthologs #1972. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubripes:90

Q5KCI2              	100.00%		H2RMC9              	100.00%
                    	       		H2T6K9              	54.41%
Bootstrap support for Q5KCI2 as seed ortholog is 100%.
Bootstrap support for H2RMC9 as seed ortholog is 100%.

Group of orthologs #1973. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:1 T.rubripes:90

Q5KFN1              	100.00%		H2TH99              	100.00%
                    	       		H2TR96              	59.72%
Bootstrap support for Q5KFN1 as seed ortholog is 54%.
Alternative seed ortholog is Q5KFD1 (1 bits away from this cluster)
Bootstrap support for H2TH99 as seed ortholog is 100%.

Group of orthologs #1974. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubripes:90

P0CR84              	100.00%		H2S8Q9              	100.00%
Bootstrap support for P0CR84 as seed ortholog is 100%.
Bootstrap support for H2S8Q9 as seed ortholog is 100%.

Group of orthologs #1975. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubripes:90

P0CM78              	100.00%		H2T964              	100.00%
Bootstrap support for P0CM78 as seed ortholog is 100%.
Bootstrap support for H2T964 as seed ortholog is 100%.

Group of orthologs #1976. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubripes:90

Q5KEW2              	100.00%		H2SSD4              	100.00%
Bootstrap support for Q5KEW2 as seed ortholog is 100%.
Bootstrap support for H2SSD4 as seed ortholog is 100%.

Group of orthologs #1977. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubripes:90

Q5KPZ4              	100.00%		H2VEQ7              	100.00%
Bootstrap support for Q5KPZ4 as seed ortholog is 100%.
Bootstrap support for H2VEQ7 as seed ortholog is 100%.

Group of orthologs #1978. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5K7W0              	100.00%		H2SQP6              	100.00%
                    	       		H2UQ34              	47.42%
Bootstrap support for Q5K7W0 as seed ortholog is 100%.
Bootstrap support for H2SQP6 as seed ortholog is 100%.

Group of orthologs #1979. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5KE53              	100.00%		H2SW68              	100.00%
                    	       		H2USV2              	35.25%
Bootstrap support for Q5KE53 as seed ortholog is 100%.
Bootstrap support for H2SW68 as seed ortholog is 100%.

Group of orthologs #1980. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5KG47              	100.00%		H2V1F8              	100.00%
                    	       		H2SYN4              	16.77%
Bootstrap support for Q5KG47 as seed ortholog is 100%.
Bootstrap support for H2V1F8 as seed ortholog is 100%.

Group of orthologs #1981. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5KI51              	100.00%		H2RKP1              	100.00%
Bootstrap support for Q5KI51 as seed ortholog is 100%.
Bootstrap support for H2RKP1 as seed ortholog is 100%.

Group of orthologs #1982. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5KKC0              	100.00%		H2SSS2              	100.00%
Bootstrap support for Q5KKC0 as seed ortholog is 100%.
Bootstrap support for H2SSS2 as seed ortholog is 100%.

Group of orthologs #1983. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5KNR5              	100.00%		H2SZR9              	100.00%
Bootstrap support for Q5KNR5 as seed ortholog is 100%.
Bootstrap support for H2SZR9 as seed ortholog is 100%.

Group of orthologs #1984. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubripes:89

Q5KNW0              	100.00%		H2UAD8              	100.00%
Bootstrap support for Q5KNW0 as seed ortholog is 100%.
Bootstrap support for H2UAD8 as seed ortholog is 100%.

Group of orthologs #1985. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubripes:88

Q5K8A3              	100.00%		H2UK03              	100.00%
                    	       		H2SAM5              	13.94%
Bootstrap support for Q5K8A3 as seed ortholog is 100%.
Bootstrap support for H2UK03 as seed ortholog is 100%.

Group of orthologs #1986. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubripes:88

Q5KEC5              	100.00%		H2SSU1              	100.00%
Bootstrap support for Q5KEC5 as seed ortholog is 100%.
Bootstrap support for H2SSU1 as seed ortholog is 100%.

Group of orthologs #1987. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubripes:88

Q5KHJ3              	100.00%		H2TER7              	100.00%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for H2TER7 as seed ortholog is 100%.

Group of orthologs #1988. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubripes:88

Q5K766              	100.00%		H2V6U5              	100.00%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for H2V6U5 as seed ortholog is 100%.

Group of orthologs #1989. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:19

P0CS02              	100.00%		H2UX94              	46.68%
P0CS04              	100.00%		H2UQL3              	100.00%
                    	       		H2TVP1              	42.13%
Bootstrap support for P0CS02 as seed ortholog is 100%.
Bootstrap support for P0CS04 as seed ortholog is 100%.
Bootstrap support for H2UQL3 as seed ortholog is 69%.
Alternative seed ortholog is H2UJU3 (19 bits away from this cluster)

Group of orthologs #1990. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

Q07801              	100.00%		H2SSG0              	100.00%
                    	       		H2S6U1              	9.45%
Bootstrap support for Q07801 as seed ortholog is 100%.
Bootstrap support for H2SSG0 as seed ortholog is 100%.

Group of orthologs #1991. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

Q5KFC6              	100.00%		H2SG79              	100.00%
                    	       		H2SIN1              	10.24%
Bootstrap support for Q5KFC6 as seed ortholog is 100%.
Bootstrap support for H2SG79 as seed ortholog is 100%.

Group of orthologs #1992. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

P0CL90              	100.00%		H2RJK2              	100.00%
Bootstrap support for P0CL90 as seed ortholog is 100%.
Bootstrap support for H2RJK2 as seed ortholog is 100%.

Group of orthologs #1993. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

Q5KBN5              	100.00%		H2SRW3              	100.00%
Bootstrap support for Q5KBN5 as seed ortholog is 100%.
Bootstrap support for H2SRW3 as seed ortholog is 100%.

Group of orthologs #1994. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

Q5KIY8              	100.00%		H2SWZ1              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for H2SWZ1 as seed ortholog is 100%.

Group of orthologs #1995. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

Q5K727              	100.00%		H2U1S0              	100.00%
Bootstrap support for Q5K727 as seed ortholog is 100%.
Bootstrap support for H2U1S0 as seed ortholog is 100%.

Group of orthologs #1996. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubripes:87

Q5KN63              	100.00%		H2UUG4              	100.00%
Bootstrap support for Q5KN63 as seed ortholog is 100%.
Bootstrap support for H2UUG4 as seed ortholog is 100%.

Group of orthologs #1997. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KCL6              	100.00%		H2V8P3              	100.00%
Q5KDY8              	98.37%		H2UUX2              	21.55%
Q5K7K2              	97.74%		H2U6S4              	18.97%
Q5KL71              	85.34%		
Q5K820              	13.03%		
Bootstrap support for Q5KCL6 as seed ortholog is 100%.
Bootstrap support for H2V8P3 as seed ortholog is 100%.

Group of orthologs #1998. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:39

P0CR42              	100.00%		H2U7Z8              	100.00%
                    	       		H2SS29              	14.21%
                    	       		H2TAT1              	13.02%
                    	       		H2UFB7              	12.38%
Bootstrap support for P0CR42 as seed ortholog is 100%.
Bootstrap support for H2U7Z8 as seed ortholog is 82%.

Group of orthologs #1999. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

P0CO24              	100.00%		H2RWP3              	100.00%
                    	       		H2TJ64              	100.00%
                    	       		H2SHY5              	51.43%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for H2RWP3 as seed ortholog is 100%.
Bootstrap support for H2TJ64 as seed ortholog is 100%.

Group of orthologs #2000. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KCL2              	100.00%		H2SAQ1              	100.00%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for H2SAQ1 as seed ortholog is 100%.

Group of orthologs #2001. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:17

Q5KDU9              	100.00%		H2SE22              	100.00%
Bootstrap support for Q5KDU9 as seed ortholog is 100%.
Bootstrap support for H2SE22 as seed ortholog is 74%.
Alternative seed ortholog is H2U6P1 (17 bits away from this cluster)

Group of orthologs #2002. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KLY9              	100.00%		H2RZC0              	100.00%
Bootstrap support for Q5KLY9 as seed ortholog is 100%.
Bootstrap support for H2RZC0 as seed ortholog is 100%.

Group of orthologs #2003. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5K904              	100.00%		H2TNI4              	100.00%
Bootstrap support for Q5K904 as seed ortholog is 100%.
Bootstrap support for H2TNI4 as seed ortholog is 100%.

Group of orthologs #2004. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KLV4              	100.00%		H2SP35              	100.00%
Bootstrap support for Q5KLV4 as seed ortholog is 100%.
Bootstrap support for H2SP35 as seed ortholog is 100%.

Group of orthologs #2005. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:20

Q5KLL3              	100.00%		H2SS06              	100.00%
Bootstrap support for Q5KLL3 as seed ortholog is 100%.
Bootstrap support for H2SS06 as seed ortholog is 75%.

Group of orthologs #2006. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KK86              	100.00%		H2T3F1              	100.00%
Bootstrap support for Q5KK86 as seed ortholog is 100%.
Bootstrap support for H2T3F1 as seed ortholog is 100%.

Group of orthologs #2007. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KL57              	100.00%		H2TD78              	100.00%
Bootstrap support for Q5KL57 as seed ortholog is 100%.
Bootstrap support for H2TD78 as seed ortholog is 100%.

Group of orthologs #2008. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:31

Q5KP88              	100.00%		H2TIJ5              	100.00%
Bootstrap support for Q5KP88 as seed ortholog is 100%.
Bootstrap support for H2TIJ5 as seed ortholog is 79%.

Group of orthologs #2009. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5K957              	100.00%		H2UQS7              	100.00%
Bootstrap support for Q5K957 as seed ortholog is 100%.
Bootstrap support for H2UQS7 as seed ortholog is 100%.

Group of orthologs #2010. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KBY4              	100.00%		H2UN75              	100.00%
Bootstrap support for Q5KBY4 as seed ortholog is 100%.
Bootstrap support for H2UN75 as seed ortholog is 100%.

Group of orthologs #2011. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KPJ2              	100.00%		H2TQD3              	100.00%
Bootstrap support for Q5KPJ2 as seed ortholog is 100%.
Bootstrap support for H2TQD3 as seed ortholog is 100%.

Group of orthologs #2012. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KCE2              	100.00%		H2UPY4              	100.00%
Bootstrap support for Q5KCE2 as seed ortholog is 100%.
Bootstrap support for H2UPY4 as seed ortholog is 100%.

Group of orthologs #2013. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KM48              	100.00%		H2U2E4              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 100%.
Bootstrap support for H2U2E4 as seed ortholog is 100%.

Group of orthologs #2014. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KL90              	100.00%		H2UD68              	100.00%
Bootstrap support for Q5KL90 as seed ortholog is 100%.
Bootstrap support for H2UD68 as seed ortholog is 100%.

Group of orthologs #2015. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubripes:86

Q5KI10              	100.00%		H2VEA6              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for H2VEA6 as seed ortholog is 100%.

Group of orthologs #2016. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubripes:85

Q5KC60              	100.00%		H2TQ60              	100.00%
                    	       		H2UAJ1              	22.14%
                    	       		H2UAI1              	17.21%
                    	       		H2SN85              	8.18%
Bootstrap support for Q5KC60 as seed ortholog is 100%.
Bootstrap support for H2TQ60 as seed ortholog is 100%.

Group of orthologs #2017. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubripes:40

Q5KHN2              	100.00%		H2SUZ6              	100.00%
Q5KM91              	100.00%		H2SXZ3              	12.83%
Bootstrap support for Q5KHN2 as seed ortholog is 100%.
Bootstrap support for Q5KM91 as seed ortholog is 100%.
Bootstrap support for H2SUZ6 as seed ortholog is 87%.

Group of orthologs #2018. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:8 T.rubripes:85

Q5KE10              	100.00%		H2TNG8              	100.00%
                    	       		H2RJL9              	53.75%
                    	       		H2V6H8              	49.35%
Bootstrap support for Q5KE10 as seed ortholog is 68%.
Alternative seed ortholog is Q5KF39 (8 bits away from this cluster)
Bootstrap support for H2TNG8 as seed ortholog is 100%.

Group of orthologs #2019. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubripes:20

F5HFW5              	100.00%		H2SDY8              	100.00%
Bootstrap support for F5HFW5 as seed ortholog is 100%.
Bootstrap support for H2SDY8 as seed ortholog is 67%.
Alternative seed ortholog is H2SY93 (20 bits away from this cluster)

Group of orthologs #2020. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubripes:85

Q5KHW9              	100.00%		H2TCN9              	100.00%
Bootstrap support for Q5KHW9 as seed ortholog is 100%.
Bootstrap support for H2TCN9 as seed ortholog is 100%.

Group of orthologs #2021. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubripes:85

Q5KDB8              	100.00%		H2UZ11              	100.00%
Bootstrap support for Q5KDB8 as seed ortholog is 100%.
Bootstrap support for H2UZ11 as seed ortholog is 100%.

Group of orthologs #2022. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubripes:85

Q5KGC7              	100.00%		H2V4Y8              	100.00%
Bootstrap support for Q5KGC7 as seed ortholog is 100%.
Bootstrap support for H2V4Y8 as seed ortholog is 100%.

Group of orthologs #2023. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KIX2              	100.00%		H2RST2              	100.00%
                    	       		H2THK5              	15.62%
                    	       		H2TKW9              	11.09%
                    	       		H2TH95              	10.80%
                    	       		H2UMV5              	8.03%
                    	       		H2S6J1              	5.99%
Bootstrap support for Q5KIX2 as seed ortholog is 100%.
Bootstrap support for H2RST2 as seed ortholog is 100%.

Group of orthologs #2024. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KHZ8              	100.00%		H2SYV4              	100.00%
                    	       		H2TVI2              	49.38%
                    	       		H2SVX2              	35.03%
                    	       		H2UGQ6              	31.64%
                    	       		H2SVH1              	12.50%
Bootstrap support for Q5KHZ8 as seed ortholog is 100%.
Bootstrap support for H2SYV4 as seed ortholog is 100%.

Group of orthologs #2025. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KI35              	100.00%		H2STQ7              	100.00%
                    	       		H2TH68              	12.96%
Bootstrap support for Q5KI35 as seed ortholog is 100%.
Bootstrap support for H2STQ7 as seed ortholog is 100%.

Group of orthologs #2026. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5K8Z8              	100.00%		H2RSG7              	100.00%
Bootstrap support for Q5K8Z8 as seed ortholog is 100%.
Bootstrap support for H2RSG7 as seed ortholog is 100%.

Group of orthologs #2027. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5K7T8              	100.00%		H2SSJ5              	100.00%
Bootstrap support for Q5K7T8 as seed ortholog is 100%.
Bootstrap support for H2SSJ5 as seed ortholog is 100%.

Group of orthologs #2028. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KEE4              	100.00%		H2STN1              	100.00%
Bootstrap support for Q5KEE4 as seed ortholog is 100%.
Bootstrap support for H2STN1 as seed ortholog is 100%.

Group of orthologs #2029. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KNN4              	100.00%		H2S436              	100.00%
Bootstrap support for Q5KNN4 as seed ortholog is 100%.
Bootstrap support for H2S436 as seed ortholog is 100%.

Group of orthologs #2030. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KG40              	100.00%		H2THS0              	100.00%
Bootstrap support for Q5KG40 as seed ortholog is 100%.
Bootstrap support for H2THS0 as seed ortholog is 100%.

Group of orthologs #2031. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubripes:84

Q5KKZ0              	100.00%		H2URS1              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 100%.
Bootstrap support for H2URS1 as seed ortholog is 100%.

Group of orthologs #2032. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubripes:83

Q5KJX4              	100.00%		H2V7Q2              	100.00%
                    	       		H2RKU5              	11.31%
Bootstrap support for Q5KJX4 as seed ortholog is 100%.
Bootstrap support for H2V7Q2 as seed ortholog is 100%.

Group of orthologs #2033. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubripes:83

P0CR88              	100.00%		H2RU10              	100.00%
Bootstrap support for P0CR88 as seed ortholog is 100%.
Bootstrap support for H2RU10 as seed ortholog is 100%.

Group of orthologs #2034. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubripes:83

Q5KMP9              	100.00%		H2SY21              	100.00%
Bootstrap support for Q5KMP9 as seed ortholog is 100%.
Bootstrap support for H2SY21 as seed ortholog is 100%.

Group of orthologs #2035. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubripes:83

Q5K8K2              	100.00%		H2U345              	100.00%
Bootstrap support for Q5K8K2 as seed ortholog is 100%.
Bootstrap support for H2U345 as seed ortholog is 100%.

Group of orthologs #2036. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubripes:83

Q5KAA1              	100.00%		H2UEL2              	100.00%
Bootstrap support for Q5KAA1 as seed ortholog is 100%.
Bootstrap support for H2UEL2 as seed ortholog is 100%.

Group of orthologs #2037. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:14

Q5K9W5              	100.00%		H2SHD4              	100.00%
                    	       		H2SCG2              	58.30%
Bootstrap support for Q5K9W5 as seed ortholog is 100%.
Bootstrap support for H2SHD4 as seed ortholog is 71%.
Alternative seed ortholog is H2SKI6 (14 bits away from this cluster)

Group of orthologs #2038. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:6 T.rubripes:82

Q5KEH1              	100.00%		H2S9K9              	100.00%
                    	       		H2TDE5              	32.64%
Bootstrap support for Q5KEH1 as seed ortholog is 69%.
Alternative seed ortholog is Q5KN38 (6 bits away from this cluster)
Bootstrap support for H2S9K9 as seed ortholog is 100%.

Group of orthologs #2039. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:82

Q5K878              	100.00%		H2T6L1              	100.00%
Q5KNL0              	43.80%		
Bootstrap support for Q5K878 as seed ortholog is 100%.
Bootstrap support for H2T6L1 as seed ortholog is 100%.

Group of orthologs #2040. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:82

Q5KL63              	100.00%		H2TEY5              	100.00%
                    	       		H2SKZ8              	67.40%
Bootstrap support for Q5KL63 as seed ortholog is 100%.
Bootstrap support for H2TEY5 as seed ortholog is 100%.

Group of orthologs #2041. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:82

Q5K9V6              	100.00%		H2RM89              	100.00%
Bootstrap support for Q5K9V6 as seed ortholog is 100%.
Bootstrap support for H2RM89 as seed ortholog is 100%.

Group of orthologs #2042. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:82

Q5K9P1              	100.00%		H2SS41              	100.00%
Bootstrap support for Q5K9P1 as seed ortholog is 100%.
Bootstrap support for H2SS41 as seed ortholog is 100%.

Group of orthologs #2043. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:82

Q5KBQ0              	100.00%		H2T7W0              	100.00%
Bootstrap support for Q5KBQ0 as seed ortholog is 100%.
Bootstrap support for H2T7W0 as seed ortholog is 100%.

Group of orthologs #2044. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubripes:4

Q5KN92              	100.00%		H2VAQ8              	100.00%
Bootstrap support for Q5KN92 as seed ortholog is 100%.
Bootstrap support for H2VAQ8 as seed ortholog is 67%.
Alternative seed ortholog is H2T4V0 (4 bits away from this cluster)

Group of orthologs #2045. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KLS9              	100.00%		H2U2S8              	100.00%
                    	       		H2V3W4              	39.14%
Bootstrap support for Q5KLS9 as seed ortholog is 100%.
Bootstrap support for H2U2S8 as seed ortholog is 100%.

Group of orthologs #2046. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KFM9              	100.00%		H2V733              	100.00%
                    	       		H2RXH0              	9.91%
Bootstrap support for Q5KFM9 as seed ortholog is 100%.
Bootstrap support for H2V733 as seed ortholog is 100%.

Group of orthologs #2047. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KAI3              	100.00%		H2SAS7              	100.00%
Bootstrap support for Q5KAI3 as seed ortholog is 100%.
Bootstrap support for H2SAS7 as seed ortholog is 100%.

Group of orthologs #2048. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KFF8              	100.00%		H2T632              	100.00%
Bootstrap support for Q5KFF8 as seed ortholog is 100%.
Bootstrap support for H2T632 as seed ortholog is 100%.

Group of orthologs #2049. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KAI0              	100.00%		H2TSY1              	100.00%
Bootstrap support for Q5KAI0 as seed ortholog is 100%.
Bootstrap support for H2TSY1 as seed ortholog is 100%.

Group of orthologs #2050. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KDZ7              	100.00%		H2TNE7              	100.00%
Bootstrap support for Q5KDZ7 as seed ortholog is 100%.
Bootstrap support for H2TNE7 as seed ortholog is 100%.

Group of orthologs #2051. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KI30              	100.00%		H2TIZ1              	100.00%
Bootstrap support for Q5KI30 as seed ortholog is 100%.
Bootstrap support for H2TIZ1 as seed ortholog is 100%.

Group of orthologs #2052. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KHQ2              	100.00%		H2TRP9              	100.00%
Bootstrap support for Q5KHQ2 as seed ortholog is 100%.
Bootstrap support for H2TRP9 as seed ortholog is 100%.

Group of orthologs #2053. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KGD9              	100.00%		H2UNU7              	100.00%
Bootstrap support for Q5KGD9 as seed ortholog is 100%.
Bootstrap support for H2UNU7 as seed ortholog is 100%.

Group of orthologs #2054. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubripes:81

Q5KLT2              	100.00%		H2V6S1              	100.00%
Bootstrap support for Q5KLT2 as seed ortholog is 100%.
Bootstrap support for H2V6S1 as seed ortholog is 100%.

Group of orthologs #2055. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

Q5KJ70              	100.00%		H2SNG9              	100.00%
                    	       		H2UME9              	10.00%
Bootstrap support for Q5KJ70 as seed ortholog is 100%.
Bootstrap support for H2SNG9 as seed ortholog is 100%.

Group of orthologs #2056. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

P0CM06              	100.00%		H2U377              	100.00%
                    	       		H2T3Z2              	66.54%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for H2U377 as seed ortholog is 100%.

Group of orthologs #2057. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

Q5KPR0              	100.00%		H2U523              	100.00%
                    	       		H2V082              	5.66%
Bootstrap support for Q5KPR0 as seed ortholog is 100%.
Bootstrap support for H2U523 as seed ortholog is 100%.

Group of orthologs #2058. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

P0CM90              	100.00%		H2SSK7              	100.00%
Bootstrap support for P0CM90 as seed ortholog is 100%.
Bootstrap support for H2SSK7 as seed ortholog is 100%.

Group of orthologs #2059. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

Q5KEZ4              	100.00%		H2T0G0              	100.00%
Bootstrap support for Q5KEZ4 as seed ortholog is 100%.
Bootstrap support for H2T0G0 as seed ortholog is 100%.

Group of orthologs #2060. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

Q5KIS8              	100.00%		H2TIP4              	100.00%
Bootstrap support for Q5KIS8 as seed ortholog is 100%.
Bootstrap support for H2TIP4 as seed ortholog is 100%.

Group of orthologs #2061. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

Q5K8M0              	100.00%		H2V482              	100.00%
Bootstrap support for Q5K8M0 as seed ortholog is 100%.
Bootstrap support for H2V482 as seed ortholog is 100%.

Group of orthologs #2062. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubripes:80

Q5KLY6              	100.00%		H2UMG4              	100.00%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for H2UMG4 as seed ortholog is 100%.

Group of orthologs #2063. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubripes:79

Q5KG37              	100.00%		H2SE44              	100.00%
Q5KLT0              	6.70%		H2T358              	100.00%
Bootstrap support for Q5KG37 as seed ortholog is 100%.
Bootstrap support for H2SE44 as seed ortholog is 100%.
Bootstrap support for H2T358 as seed ortholog is 100%.

Group of orthologs #2064. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:34 T.rubripes:79

Q5KGT0              	100.00%		H2TX60              	100.00%
Q5K977              	49.17%		H2U4T4              	26.65%
Bootstrap support for Q5KGT0 as seed ortholog is 66%.
Alternative seed ortholog is Q5K7U4 (34 bits away from this cluster)
Bootstrap support for H2TX60 as seed ortholog is 100%.

Group of orthologs #2065. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubripes:79

Q5K9F3              	100.00%		H2RU31              	100.00%
                    	       		H2RNT7              	17.24%
Bootstrap support for Q5K9F3 as seed ortholog is 100%.
Bootstrap support for H2RU31 as seed ortholog is 100%.

Group of orthologs #2066. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubripes:79

Q5KNF3              	100.00%		H2TZ11              	100.00%
Bootstrap support for Q5KNF3 as seed ortholog is 100%.
Bootstrap support for H2TZ11 as seed ortholog is 100%.

Group of orthologs #2067. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubripes:79

Q5KJK6              	100.00%		H2UJG4              	100.00%
Bootstrap support for Q5KJK6 as seed ortholog is 100%.
Bootstrap support for H2UJG4 as seed ortholog is 100%.

Group of orthologs #2068. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KDK7              	100.00%		H2UXF4              	100.00%
                    	       		H2T748              	30.47%
                    	       		H2SR73              	28.49%
                    	       		H2US64              	21.98%
                    	       		H2S6X9              	6.51%
                    	       		H2SVM8              	6.16%
Bootstrap support for Q5KDK7 as seed ortholog is 100%.
Bootstrap support for H2UXF4 as seed ortholog is 100%.

Group of orthologs #2069. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KMT7              	100.00%		H2TF68              	100.00%
                    	       		Q1KKR9              	82.51%
                    	       		H2V6X4              	43.91%
                    	       		Q1KKT4              	41.71%
Bootstrap support for Q5KMT7 as seed ortholog is 100%.
Bootstrap support for H2TF68 as seed ortholog is 100%.

Group of orthologs #2070. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KL85              	100.00%		H2RJL1              	100.00%
                    	       		H2TCL6              	10.08%
                    	       		H2TWH7              	7.75%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for H2RJL1 as seed ortholog is 100%.

Group of orthologs #2071. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KQ66              	100.00%		H2TUC1              	100.00%
                    	       		H2TIA2              	24.12%
                    	       		H2T2Q8              	7.32%
Bootstrap support for Q5KQ66 as seed ortholog is 100%.
Bootstrap support for H2TUC1 as seed ortholog is 100%.

Group of orthologs #2072. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KL07              	100.00%		H2SE36              	100.00%
Bootstrap support for Q5KL07 as seed ortholog is 100%.
Bootstrap support for H2SE36 as seed ortholog is 100%.

Group of orthologs #2073. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KNX9              	100.00%		H2SE99              	100.00%
Bootstrap support for Q5KNX9 as seed ortholog is 100%.
Bootstrap support for H2SE99 as seed ortholog is 100%.

Group of orthologs #2074. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubripes:78

Q5KND5              	100.00%		H2TC29              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for H2TC29 as seed ortholog is 100%.

Group of orthologs #2075. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5KLI5              	100.00%		H2UES3              	100.00%
                    	       		H2UWE1              	7.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for H2UES3 as seed ortholog is 100%.

Group of orthologs #2076. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5K8K8              	100.00%		H2RMA7              	100.00%
Bootstrap support for Q5K8K8 as seed ortholog is 100%.
Bootstrap support for H2RMA7 as seed ortholog is 100%.

Group of orthologs #2077. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5KHC1              	100.00%		H2T115              	100.00%
Bootstrap support for Q5KHC1 as seed ortholog is 100%.
Bootstrap support for H2T115 as seed ortholog is 100%.

Group of orthologs #2078. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubripes:77

Q5K9Z0              	100.00%		H2TMK0              	100.00%
Bootstrap support for Q5K9Z0 as seed ortholog is 73%.
Alternative seed ortholog is Q5KIL3 (19 bits away from this cluster)
Bootstrap support for H2TMK0 as seed ortholog is 100%.

Group of orthologs #2079. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5KPR9              	100.00%		H2SJH5              	100.00%
Bootstrap support for Q5KPR9 as seed ortholog is 100%.
Bootstrap support for H2SJH5 as seed ortholog is 100%.

Group of orthologs #2080. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5K827              	100.00%		H2U1U3              	100.00%
Bootstrap support for Q5K827 as seed ortholog is 100%.
Bootstrap support for H2U1U3 as seed ortholog is 100%.

Group of orthologs #2081. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5K764              	100.00%		H2UK14              	100.00%
Bootstrap support for Q5K764 as seed ortholog is 100%.
Bootstrap support for H2UK14 as seed ortholog is 100%.

Group of orthologs #2082. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5K9G7              	100.00%		H2V137              	100.00%
Bootstrap support for Q5K9G7 as seed ortholog is 100%.
Bootstrap support for H2V137 as seed ortholog is 100%.

Group of orthologs #2083. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubripes:77

Q5KPR2              	100.00%		H2U240              	100.00%
Bootstrap support for Q5KPR2 as seed ortholog is 100%.
Bootstrap support for H2U240 as seed ortholog is 100%.

Group of orthologs #2084. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

Q5KKZ1              	100.00%		H2VAM0              	100.00%
                    	       		H2RMD7              	9.74%
Bootstrap support for Q5KKZ1 as seed ortholog is 100%.
Bootstrap support for H2VAM0 as seed ortholog is 100%.

Group of orthologs #2085. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

P0CN38              	100.00%		H2S473              	100.00%
Bootstrap support for P0CN38 as seed ortholog is 100%.
Bootstrap support for H2S473 as seed ortholog is 100%.

Group of orthologs #2086. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

Q5KGY0              	100.00%		H2RPT8              	100.00%
Bootstrap support for Q5KGY0 as seed ortholog is 100%.
Bootstrap support for H2RPT8 as seed ortholog is 100%.

Group of orthologs #2087. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

P0CN88              	100.00%		H2U4R4              	100.00%
Bootstrap support for P0CN88 as seed ortholog is 100%.
Bootstrap support for H2U4R4 as seed ortholog is 100%.

Group of orthologs #2088. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

Q5KLI2              	100.00%		H2TIH3              	100.00%
Bootstrap support for Q5KLI2 as seed ortholog is 100%.
Bootstrap support for H2TIH3 as seed ortholog is 100%.

Group of orthologs #2089. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

Q5KFZ6              	100.00%		H2U0K3              	100.00%
Bootstrap support for Q5KFZ6 as seed ortholog is 100%.
Bootstrap support for H2U0K3 as seed ortholog is 100%.

Group of orthologs #2090. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubripes:76

Q5KIN2              	100.00%		H2VCA5              	100.00%
Bootstrap support for Q5KIN2 as seed ortholog is 100%.
Bootstrap support for H2VCA5 as seed ortholog is 100%.

Group of orthologs #2091. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5K7N1              	100.00%		H2U571              	100.00%
Q5KMW9              	12.13%		H2RVG2              	48.15%
Q5KKK7              	12.13%		
Q5KBZ5              	7.19%		
Bootstrap support for Q5K7N1 as seed ortholog is 100%.
Bootstrap support for H2U571 as seed ortholog is 100%.

Group of orthologs #2092. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5K9S2              	100.00%		H2VE85              	100.00%
                    	       		H2VDP9              	29.51%
                    	       		H2TE04              	12.45%
Bootstrap support for Q5K9S2 as seed ortholog is 100%.
Bootstrap support for H2VE85 as seed ortholog is 100%.

Group of orthologs #2093. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KA20              	100.00%		H2SB02              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 100%.
Bootstrap support for H2SB02 as seed ortholog is 100%.

Group of orthologs #2094. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KFM1              	100.00%		H2SF67              	100.00%
Bootstrap support for Q5KFM1 as seed ortholog is 100%.
Bootstrap support for H2SF67 as seed ortholog is 100%.

Group of orthologs #2095. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KJL1              	100.00%		H2S4P1              	100.00%
Bootstrap support for Q5KJL1 as seed ortholog is 100%.
Bootstrap support for H2S4P1 as seed ortholog is 100%.

Group of orthologs #2096. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KCE1              	100.00%		H2SUR3              	100.00%
Bootstrap support for Q5KCE1 as seed ortholog is 100%.
Bootstrap support for H2SUR3 as seed ortholog is 100%.

Group of orthologs #2097. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KK55              	100.00%		H2SB55              	100.00%
Bootstrap support for Q5KK55 as seed ortholog is 100%.
Bootstrap support for H2SB55 as seed ortholog is 100%.

Group of orthologs #2098. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

P0CS00              	100.00%		H2U5E5              	100.00%
Bootstrap support for P0CS00 as seed ortholog is 100%.
Bootstrap support for H2U5E5 as seed ortholog is 100%.

Group of orthologs #2099. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KDI4              	100.00%		H2ULS1              	100.00%
Bootstrap support for Q5KDI4 as seed ortholog is 100%.
Bootstrap support for H2ULS1 as seed ortholog is 100%.

Group of orthologs #2100. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubripes:75

Q5KK48              	100.00%		H2U5Y3              	100.00%
Bootstrap support for Q5KK48 as seed ortholog is 100%.
Bootstrap support for H2U5Y3 as seed ortholog is 100%.

Group of orthologs #2101. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:6

Q5KFN8              	100.00%		H2U4I7              	100.00%
                    	       		H2TZ36              	29.04%
                    	       		H2T500              	8.71%
                    	       		H2T0M4              	8.08%
                    	       		H2UGV2              	7.83%
                    	       		H2TWT4              	7.45%
                    	       		H2VBK8              	7.45%
                    	       		H2RY70              	7.20%
                    	       		H2S8G4              	7.20%
                    	       		H2TV22              	6.69%
Bootstrap support for Q5KFN8 as seed ortholog is 100%.
Bootstrap support for H2U4I7 as seed ortholog is 62%.
Alternative seed ortholog is H2SY57 (6 bits away from this cluster)

Group of orthologs #2102. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:26

Q5KDM4              	100.00%		H2SBI0              	100.00%
                    	       		Q1KKV2              	50.95%
                    	       		I6L6Z9              	29.60%
                    	       		H2V6T9              	29.41%
                    	       		H2UQE4              	25.33%
                    	       		Q1KL17              	13.95%
Bootstrap support for Q5KDM4 as seed ortholog is 100%.
Bootstrap support for H2SBI0 as seed ortholog is 63%.
Alternative seed ortholog is Q1KKU6 (26 bits away from this cluster)

Group of orthologs #2103. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KJ61              	100.00%		H2TVI8              	100.00%
                    	       		H2SCV4              	45.17%
                    	       		H2TSN4              	43.79%
                    	       		H2T5T5              	42.73%
                    	       		H2S7P8              	41.67%
                    	       		H2TPZ0              	41.35%
Bootstrap support for Q5KJ61 as seed ortholog is 100%.
Bootstrap support for H2TVI8 as seed ortholog is 100%.

Group of orthologs #2104. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

P0CO44              	100.00%		H2U0K6              	100.00%
                    	       		H2UTK2              	30.40%
                    	       		H2UBH5              	26.99%
                    	       		H2U0Y4              	5.40%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for H2U0K6 as seed ortholog is 100%.

Group of orthologs #2105. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:12 T.rubripes:74

Q5K8W4              	100.00%		H2UB95              	100.00%
                    	       		H2UWP8              	12.91%
                    	       		H2UFE9              	12.38%
                    	       		H2U3Z3              	5.71%
Bootstrap support for Q5K8W4 as seed ortholog is 53%.
Alternative seed ortholog is Q5K6U6 (12 bits away from this cluster)
Bootstrap support for H2UB95 as seed ortholog is 100%.

Group of orthologs #2106. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KIY1              	100.00%		H2S424              	100.00%
                    	       		H2UNQ8              	8.06%
Bootstrap support for Q5KIY1 as seed ortholog is 100%.
Bootstrap support for H2S424 as seed ortholog is 100%.

Group of orthologs #2107. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5K7C2              	100.00%		H2TC01              	100.00%
                    	       		H2UWE7              	18.34%
Bootstrap support for Q5K7C2 as seed ortholog is 100%.
Bootstrap support for H2TC01 as seed ortholog is 100%.

Group of orthologs #2108. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KPT6              	100.00%		H2RJW6              	100.00%
Bootstrap support for Q5KPT6 as seed ortholog is 100%.
Bootstrap support for H2RJW6 as seed ortholog is 100%.

Group of orthologs #2109. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KCB1              	100.00%		H2SZ22              	100.00%
Bootstrap support for Q5KCB1 as seed ortholog is 100%.
Bootstrap support for H2SZ22 as seed ortholog is 100%.

Group of orthologs #2110. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KCA2              	100.00%		H2T577              	100.00%
Bootstrap support for Q5KCA2 as seed ortholog is 100%.
Bootstrap support for H2T577 as seed ortholog is 100%.

Group of orthologs #2111. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5K7J0              	100.00%		H2TMC3              	100.00%
Bootstrap support for Q5K7J0 as seed ortholog is 100%.
Bootstrap support for H2TMC3 as seed ortholog is 100%.

Group of orthologs #2112. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KKG0              	100.00%		H2TDV0              	100.00%
Bootstrap support for Q5KKG0 as seed ortholog is 100%.
Bootstrap support for H2TDV0 as seed ortholog is 100%.

Group of orthologs #2113. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5K8F3              	100.00%		H2UES5              	100.00%
Bootstrap support for Q5K8F3 as seed ortholog is 100%.
Bootstrap support for H2UES5 as seed ortholog is 100%.

Group of orthologs #2114. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubripes:74

Q5KLV8              	100.00%		H2TZ84              	100.00%
Bootstrap support for Q5KLV8 as seed ortholog is 100%.
Bootstrap support for H2TZ84 as seed ortholog is 100%.

Group of orthologs #2115. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:73

Q5K7Z6              	100.00%		H2TIX0              	100.00%
                    	       		H2SY92              	10.74%
                    	       		H2U2M3              	9.21%
                    	       		H2S5I3              	9.07%
                    	       		H2T1T4              	5.58%
Bootstrap support for Q5K7Z6 as seed ortholog is 100%.
Bootstrap support for H2TIX0 as seed ortholog is 100%.

Group of orthologs #2116. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:73

Q5KLD2              	100.00%		H2SYG2              	100.00%
                    	       		Q800B3              	100.00%
                    	       		H2SQ57              	31.71%
Bootstrap support for Q5KLD2 as seed ortholog is 100%.
Bootstrap support for H2SYG2 as seed ortholog is 100%.
Bootstrap support for Q800B3 as seed ortholog is 100%.

Group of orthologs #2117. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:73

Q5KMN2              	100.00%		H2TP13              	100.00%
                    	       		H2TNM5              	26.21%
Bootstrap support for Q5KMN2 as seed ortholog is 100%.
Bootstrap support for H2TP13 as seed ortholog is 100%.

Group of orthologs #2118. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:73

P0CM28              	100.00%		H2SRC2              	100.00%
Bootstrap support for P0CM28 as seed ortholog is 100%.
Bootstrap support for H2SRC2 as seed ortholog is 100%.

Group of orthologs #2119. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:73

Q5KEZ2              	100.00%		H2TJA6              	100.00%
Bootstrap support for Q5KEZ2 as seed ortholog is 100%.
Bootstrap support for H2TJA6 as seed ortholog is 100%.

Group of orthologs #2120. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubripes:73

Q5KDZ6              	100.00%		H2UE63              	100.00%
Bootstrap support for Q5KDZ6 as seed ortholog is 100%.
Bootstrap support for H2UE63 as seed ortholog is 100%.

Group of orthologs #2121. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubripes:20

Q5K8Y3              	100.00%		H2RQC7              	100.00%
                    	       		H2T8I6              	27.60%
                    	       		H2RXQ0              	18.80%
                    	       		H2RN57              	17.40%
                    	       		H2RW49              	14.40%
Bootstrap support for Q5K8Y3 as seed ortholog is 100%.
Bootstrap support for H2RQC7 as seed ortholog is 70%.
Alternative seed ortholog is H2T1Z6 (20 bits away from this cluster)

Group of orthologs #2122. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubripes:72

Q5KBR3              	100.00%		B3Y064              	100.00%
                    	       		H2RUG9              	92.23%
                    	       		H2TIJ3              	57.51%
Bootstrap support for Q5KBR3 as seed ortholog is 100%.
Bootstrap support for B3Y064 as seed ortholog is 100%.

Group of orthologs #2123. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubripes:72

Q5KCH4              	100.00%		H2SSB3              	100.00%
Bootstrap support for Q5KCH4 as seed ortholog is 100%.
Bootstrap support for H2SSB3 as seed ortholog is 100%.

Group of orthologs #2124. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubripes:72

Q5KFV7              	100.00%		H2U825              	100.00%
Bootstrap support for Q5KFV7 as seed ortholog is 100%.
Bootstrap support for H2U825 as seed ortholog is 100%.

Group of orthologs #2125. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubripes:72

Q5KNX8              	100.00%		H2TSZ0              	100.00%
Bootstrap support for Q5KNX8 as seed ortholog is 100%.
Bootstrap support for H2TSZ0 as seed ortholog is 100%.

Group of orthologs #2126. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubripes:72

Q5KPF0              	100.00%		H2U3W8              	100.00%
Bootstrap support for Q5KPF0 as seed ortholog is 100%.
Bootstrap support for H2U3W8 as seed ortholog is 100%.

Group of orthologs #2127. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:71

Q5KE72              	100.00%		H2TLC1              	100.00%
                    	       		H2UMN7              	16.92%
                    	       		H2SUG7              	16.07%
                    	       		H2UIZ9              	13.64%
Bootstrap support for Q5KE72 as seed ortholog is 100%.
Bootstrap support for H2TLC1 as seed ortholog is 100%.

Group of orthologs #2128. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:71

Q5KIG8              	100.00%		H2TTL7              	100.00%
                    	       		H2VCQ5              	61.98%
Bootstrap support for Q5KIG8 as seed ortholog is 100%.
Bootstrap support for H2TTL7 as seed ortholog is 100%.

Group of orthologs #2129. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:71

Q5KEH4              	100.00%		H2RMC1              	100.00%
Bootstrap support for Q5KEH4 as seed ortholog is 100%.
Bootstrap support for H2RMC1 as seed ortholog is 100%.

Group of orthologs #2130. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubripes:71

Q5KI28              	100.00%		H2TQ87              	100.00%
Bootstrap support for Q5KI28 as seed ortholog is 100%.
Bootstrap support for H2TQ87 as seed ortholog is 100%.

Group of orthologs #2131. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

Q5KPJ0              	100.00%		H2U046              	100.00%
Q5KJD9              	19.05%		
Q5KFL3              	13.00%		
Bootstrap support for Q5KPJ0 as seed ortholog is 100%.
Bootstrap support for H2U046 as seed ortholog is 100%.

Group of orthologs #2132. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

Q5KD64              	100.00%		H2UTT2              	100.00%
                    	       		H2TVE0              	18.11%
Bootstrap support for Q5KD64 as seed ortholog is 100%.
Bootstrap support for H2UTT2 as seed ortholog is 100%.

Group of orthologs #2133. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

Q5KNC9              	100.00%		H2VAR1              	100.00%
                    	       		H2SBF7              	22.26%
Bootstrap support for Q5KNC9 as seed ortholog is 100%.
Bootstrap support for H2VAR1 as seed ortholog is 100%.

Group of orthologs #2134. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

P0CP04              	100.00%		H2TKH6              	100.00%
Bootstrap support for P0CP04 as seed ortholog is 100%.
Bootstrap support for H2TKH6 as seed ortholog is 100%.

Group of orthologs #2135. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

Q5K9N4              	100.00%		H2UPQ9              	100.00%
Bootstrap support for Q5K9N4 as seed ortholog is 100%.
Bootstrap support for H2UPQ9 as seed ortholog is 100%.

Group of orthologs #2136. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

P0CR32              	100.00%		H2V518              	100.00%
Bootstrap support for P0CR32 as seed ortholog is 100%.
Bootstrap support for H2V518 as seed ortholog is 100%.

Group of orthologs #2137. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

Q5KCT7              	100.00%		H2UUT9              	100.00%
Bootstrap support for Q5KCT7 as seed ortholog is 100%.
Bootstrap support for H2UUT9 as seed ortholog is 100%.

Group of orthologs #2138. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubripes:70

Q5KCR0              	100.00%		H2VAX0              	100.00%
Bootstrap support for Q5KCR0 as seed ortholog is 100%.
Bootstrap support for H2VAX0 as seed ortholog is 100%.

Group of orthologs #2139. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:9 T.rubripes:13

Q5KEH8              	100.00%		H2USG7              	100.00%
                    	       		H2U9W7              	26.71%
Bootstrap support for Q5KEH8 as seed ortholog is 61%.
Alternative seed ortholog is Q5KD14 (9 bits away from this cluster)
Bootstrap support for H2USG7 as seed ortholog is 70%.
Alternative seed ortholog is H2SLN6 (13 bits away from this cluster)

Group of orthologs #2140. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5K7S6              	100.00%		H2U7W9              	100.00%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for H2U7W9 as seed ortholog is 100%.

Group of orthologs #2141. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5K6Y1              	100.00%		H2UBP1              	100.00%
Bootstrap support for Q5K6Y1 as seed ortholog is 100%.
Bootstrap support for H2UBP1 as seed ortholog is 100%.

Group of orthologs #2142. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5KHX8              	100.00%		H2TI45              	100.00%
Bootstrap support for Q5KHX8 as seed ortholog is 100%.
Bootstrap support for H2TI45 as seed ortholog is 100%.

Group of orthologs #2143. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5KG35              	100.00%		H2U4Y1              	100.00%
Bootstrap support for Q5KG35 as seed ortholog is 100%.
Bootstrap support for H2U4Y1 as seed ortholog is 100%.

Group of orthologs #2144. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5KJK7              	100.00%		H2VCF1              	100.00%
Bootstrap support for Q5KJK7 as seed ortholog is 100%.
Bootstrap support for H2VCF1 as seed ortholog is 100%.

Group of orthologs #2145. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5KLF0              	100.00%		H2VAR2              	100.00%
Bootstrap support for Q5KLF0 as seed ortholog is 100%.
Bootstrap support for H2VAR2 as seed ortholog is 100%.

Group of orthologs #2146. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubripes:69

Q5KMV9              	100.00%		H2VAT0              	100.00%
Bootstrap support for Q5KMV9 as seed ortholog is 100%.
Bootstrap support for H2VAT0 as seed ortholog is 100%.

Group of orthologs #2147. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

Q5KNH9              	100.00%		H2RNJ2              	100.00%
                    	       		H2SML2              	10.86%
Bootstrap support for Q5KNH9 as seed ortholog is 100%.
Bootstrap support for H2RNJ2 as seed ortholog is 100%.

Group of orthologs #2148. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

Q5KAA3              	100.00%		H2SBY3              	100.00%
Bootstrap support for Q5KAA3 as seed ortholog is 100%.
Bootstrap support for H2SBY3 as seed ortholog is 100%.

Group of orthologs #2149. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

P0CM00              	100.00%		H2SQ74              	100.00%
Bootstrap support for P0CM00 as seed ortholog is 100%.
Bootstrap support for H2SQ74 as seed ortholog is 100%.

Group of orthologs #2150. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

Q5KP22              	100.00%		H2RT07              	100.00%
Bootstrap support for Q5KP22 as seed ortholog is 100%.
Bootstrap support for H2RT07 as seed ortholog is 100%.

Group of orthologs #2151. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

Q5KH89              	100.00%		H2UUK4              	100.00%
Bootstrap support for Q5KH89 as seed ortholog is 100%.
Bootstrap support for H2UUK4 as seed ortholog is 100%.

Group of orthologs #2152. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubripes:68

Q5KIX6              	100.00%		H2VF30              	100.00%
Bootstrap support for Q5KIX6 as seed ortholog is 100%.
Bootstrap support for H2VF30 as seed ortholog is 100%.

Group of orthologs #2153. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:67

Q5KLI8              	100.00%		H2V272              	100.00%
                    	       		H2RUV6              	49.28%
                    	       		H2URM2              	32.00%
                    	       		H2UHE7              	27.47%
                    	       		H2V9U3              	22.53%
                    	       		H2U372              	22.33%
                    	       		H2SEL2              	7.92%
                    	       		H2TQT7              	7.82%
                    	       		H2T4H2              	7.41%
                    	       		H2RM74              	6.69%
Bootstrap support for Q5KLI8 as seed ortholog is 100%.
Bootstrap support for H2V272 as seed ortholog is 100%.

Group of orthologs #2154. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:24

Q5K9Q9              	100.00%		H2TXW4              	100.00%
Q5KG59              	100.00%		H2S080              	8.01%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for H2TXW4 as seed ortholog is 75%.

Group of orthologs #2155. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:67

Q5KPM9              	100.00%		H2RLB3              	100.00%
Bootstrap support for Q5KPM9 as seed ortholog is 100%.
Bootstrap support for H2RLB3 as seed ortholog is 100%.

Group of orthologs #2156. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:11

Q5KIC6              	100.00%		H2SCM4              	100.00%
Bootstrap support for Q5KIC6 as seed ortholog is 100%.
Bootstrap support for H2SCM4 as seed ortholog is 64%.
Alternative seed ortholog is H2U3J8 (11 bits away from this cluster)

Group of orthologs #2157. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:67

P0CR98              	100.00%		H2ULG1              	100.00%
Bootstrap support for P0CR98 as seed ortholog is 100%.
Bootstrap support for H2ULG1 as seed ortholog is 100%.

Group of orthologs #2158. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubripes:67

Q5KK46              	100.00%		H2U2R8              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for H2U2R8 as seed ortholog is 100%.

Group of orthologs #2159. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

P0CS58              	100.00%		H2RSA1              	100.00%
Bootstrap support for P0CS58 as seed ortholog is 100%.
Bootstrap support for H2RSA1 as seed ortholog is 100%.

Group of orthologs #2160. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

Q5K7I1              	100.00%		H2SIY8              	100.00%
Bootstrap support for Q5K7I1 as seed ortholog is 100%.
Bootstrap support for H2SIY8 as seed ortholog is 100%.

Group of orthologs #2161. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

Q5KM94              	100.00%		H2RT67              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for H2RT67 as seed ortholog is 100%.

Group of orthologs #2162. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

Q5KJN7              	100.00%		H2ST60              	100.00%
Bootstrap support for Q5KJN7 as seed ortholog is 100%.
Bootstrap support for H2ST60 as seed ortholog is 100%.

Group of orthologs #2163. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

Q5KIV8              	100.00%		H2TNN6              	100.00%
Bootstrap support for Q5KIV8 as seed ortholog is 100%.
Bootstrap support for H2TNN6 as seed ortholog is 100%.

Group of orthologs #2164. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

Q5K9K3              	100.00%		H2UKM5              	100.00%
Bootstrap support for Q5K9K3 as seed ortholog is 100%.
Bootstrap support for H2UKM5 as seed ortholog is 100%.

Group of orthologs #2165. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubripes:66

Q5KHW4              	100.00%		H2VAH6              	100.00%
Bootstrap support for Q5KHW4 as seed ortholog is 100%.
Bootstrap support for H2VAH6 as seed ortholog is 100%.

Group of orthologs #2166. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:65

Q5KBG2              	100.00%		H2RLA2              	100.00%
                    	       		H2SFP2              	13.90%
                    	       		H2TKP8              	12.26%
Bootstrap support for Q5KBG2 as seed ortholog is 100%.
Bootstrap support for H2RLA2 as seed ortholog is 100%.

Group of orthologs #2167. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:65

Q5KH14              	100.00%		H2USC0              	100.00%
                    	       		H2UQ53              	55.13%
                    	       		H2UP98              	26.97%
Bootstrap support for Q5KH14 as seed ortholog is 100%.
Bootstrap support for H2USC0 as seed ortholog is 100%.

Group of orthologs #2168. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:65

Q5KPL1              	100.00%		H2S671              	100.00%
Bootstrap support for Q5KPL1 as seed ortholog is 100%.
Bootstrap support for H2S671 as seed ortholog is 100%.

Group of orthologs #2169. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubripes:65

Q5KNI8              	100.00%		H2T2W7              	100.00%
Bootstrap support for Q5KNI8 as seed ortholog is 100%.
Bootstrap support for H2T2W7 as seed ortholog is 100%.

Group of orthologs #2170. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5KKS6              	100.00%		H2U7Y5              	100.00%
Q5KI02              	100.00%		H2STT4              	100.00%
Q5KHX6              	62.62%		H2U1G4              	73.81%
Q5KBE7              	50.35%		H2V4Y0              	71.65%
Q5K9T2              	22.69%		H2T1G0              	65.60%
Q5KNP3              	21.20%		H2SQR9              	41.56%
Q5KKU1              	20.81%		H2SJM1              	9.77%
Q5KBM4              	20.40%		
Q5KA87              	19.90%		
Q5K7A1              	19.23%		
Q5KC55              	18.91%		
Q5KHF5              	16.57%		
Q5K7L4              	16.57%		
Q5KEM4              	15.52%		
Q5KPG5              	15.09%		
Q5K886              	14.79%		
Q5K875              	14.69%		
Q5K7F5              	12.92%		
Q5K9X4              	12.03%		
Q5KQ74              	12.03%		
Q5KN93              	11.54%		
Q5KG03              	10.75%		
Q5KNB7              	10.06%		
Q5KFM8              	9.76%		
Q5KA09              	9.57%		
Q5K928              	9.37%		
Q5KEI1              	9.07%		
Q5K984              	8.88%		
Q5KB76              	8.88%		
Q5KJE6              	8.78%		
Q5K9A2              	8.68%		
Q5KNV0              	7.66%		
Q5KFK2              	7.59%		
Q5K860              	7.59%		
Q5KFK1              	7.50%		
Q5KER3              	7.50%		
Q5KL40              	7.50%		
Q5KAT7              	7.40%		
Q5KC83              	7.40%		
Q5KGY8              	7.40%		
Q5KH82              	5.92%		
Bootstrap support for Q5KKS6 as seed ortholog is 100%.
Bootstrap support for Q5KI02 as seed ortholog is 100%.
Bootstrap support for H2U7Y5 as seed ortholog is 100%.
Bootstrap support for H2STT4 as seed ortholog is 100%.

Group of orthologs #2171. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5K8G5              	100.00%		H2TJP7              	100.00%
                    	       		H2TLF7              	48.38%
                    	       		H2SPF5              	12.24%
                    	       		H2ST80              	12.10%
                    	       		H2T9P1              	11.81%
                    	       		H2UD77              	9.70%
                    	       		H2S677              	7.17%
Bootstrap support for Q5K8G5 as seed ortholog is 100%.
Bootstrap support for H2TJP7 as seed ortholog is 100%.

Group of orthologs #2172. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5K8N5              	100.00%		H2RK59              	100.00%
Q5K7F4              	8.59%		
Bootstrap support for Q5K8N5 as seed ortholog is 100%.
Bootstrap support for H2RK59 as seed ortholog is 100%.

Group of orthologs #2173. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5KHD2              	100.00%		H2S7H0              	100.00%
                    	       		H2SRW2              	15.93%
Bootstrap support for Q5KHD2 as seed ortholog is 100%.
Bootstrap support for H2S7H0 as seed ortholog is 100%.

Group of orthologs #2174. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5KIU3              	100.00%		H2T6Q1              	100.00%
                    	       		H2TG98              	100.00%
Bootstrap support for Q5KIU3 as seed ortholog is 100%.
Bootstrap support for H2T6Q1 as seed ortholog is 100%.
Bootstrap support for H2TG98 as seed ortholog is 100%.

Group of orthologs #2175. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5KFI5              	100.00%		H2S959              	100.00%
Bootstrap support for Q5KFI5 as seed ortholog is 100%.
Bootstrap support for H2S959 as seed ortholog is 100%.

Group of orthologs #2176. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:14 T.rubripes:64

Q5KL61              	100.00%		H2SBG0              	100.00%
Bootstrap support for Q5KL61 as seed ortholog is 84%.
Bootstrap support for H2SBG0 as seed ortholog is 100%.

Group of orthologs #2177. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:21

Q5KLA4              	100.00%		H2TJM3              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for H2TJM3 as seed ortholog is 76%.

Group of orthologs #2178. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5KMP7              	100.00%		H2TSR3              	100.00%
Bootstrap support for Q5KMP7 as seed ortholog is 100%.
Bootstrap support for H2TSR3 as seed ortholog is 100%.

Group of orthologs #2179. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubripes:64

Q5KFY1              	100.00%		H2UEV9              	100.00%
Bootstrap support for Q5KFY1 as seed ortholog is 100%.
Bootstrap support for H2UEV9 as seed ortholog is 100%.

Group of orthologs #2180. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubripes:63

Q5K8Y9              	100.00%		H2SVH0              	100.00%
Bootstrap support for Q5K8Y9 as seed ortholog is 100%.
Bootstrap support for H2SVH0 as seed ortholog is 100%.

Group of orthologs #2181. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubripes:63

Q5KIF0              	100.00%		H2SUB0              	100.00%
Bootstrap support for Q5KIF0 as seed ortholog is 100%.
Bootstrap support for H2SUB0 as seed ortholog is 100%.

Group of orthologs #2182. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:13 T.rubripes:63

Q5KGK8              	100.00%		H2TXH0              	100.00%
Bootstrap support for Q5KGK8 as seed ortholog is 89%.
Bootstrap support for H2TXH0 as seed ortholog is 100%.

Group of orthologs #2183. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubripes:63

Q5KM81              	100.00%		H2UZ47              	100.00%
Bootstrap support for Q5KM81 as seed ortholog is 100%.
Bootstrap support for H2UZ47 as seed ortholog is 100%.

Group of orthologs #2184. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5K9K0              	100.00%		H2TMM3              	100.00%
Q5KJS3              	6.00%		
Q5KEM2              	5.35%		
Bootstrap support for Q5K9K0 as seed ortholog is 100%.
Bootstrap support for H2TMM3 as seed ortholog is 100%.

Group of orthologs #2185. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5KGP9              	100.00%		H2TTV9              	100.00%
                    	       		H2V8M4              	35.40%
Bootstrap support for Q5KGP9 as seed ortholog is 100%.
Bootstrap support for H2TTV9 as seed ortholog is 100%.

Group of orthologs #2186. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5KAK3              	100.00%		H2V3H0              	100.00%
                    	       		H2SD18              	12.49%
Bootstrap support for Q5KAK3 as seed ortholog is 100%.
Bootstrap support for H2V3H0 as seed ortholog is 100%.

Group of orthologs #2187. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5KI44              	100.00%		H2UXB8              	100.00%
                    	       		H2U7F4              	24.63%
Bootstrap support for Q5KI44 as seed ortholog is 100%.
Bootstrap support for H2UXB8 as seed ortholog is 100%.

Group of orthologs #2188. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5KIM9              	100.00%		H2SBN1              	100.00%
Bootstrap support for Q5KIM9 as seed ortholog is 100%.
Bootstrap support for H2SBN1 as seed ortholog is 100%.

Group of orthologs #2189. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5KAN1              	100.00%		H2T7L3              	100.00%
Bootstrap support for Q5KAN1 as seed ortholog is 100%.
Bootstrap support for H2T7L3 as seed ortholog is 100%.

Group of orthologs #2190. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5K9F0              	100.00%		H2UK34              	100.00%
Bootstrap support for Q5K9F0 as seed ortholog is 100%.
Bootstrap support for H2UK34 as seed ortholog is 100%.

Group of orthologs #2191. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubripes:62

Q5KCJ7              	100.00%		H2VB72              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for H2VB72 as seed ortholog is 100%.

Group of orthologs #2192. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5KBV8              	100.00%		H2V255              	100.00%
                    	       		H2TVH0              	57.60%
                    	       		H2V1L8              	34.67%
Bootstrap support for Q5KBV8 as seed ortholog is 100%.
Bootstrap support for H2V255 as seed ortholog is 100%.

Group of orthologs #2193. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5KDG0              	100.00%		H2VEB9              	100.00%
Q5KQ68              	67.60%		H2UMV9              	67.57%
Bootstrap support for Q5KDG0 as seed ortholog is 100%.
Bootstrap support for H2VEB9 as seed ortholog is 100%.

Group of orthologs #2194. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5KAJ0              	100.00%		H2S6N4              	100.00%
                    	       		H2UYB5              	14.00%
Bootstrap support for Q5KAJ0 as seed ortholog is 100%.
Bootstrap support for H2S6N4 as seed ortholog is 100%.

Group of orthologs #2195. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

P0CR94              	100.00%		H2U391              	100.00%
                    	       		Q90YI5              	23.39%
Bootstrap support for P0CR94 as seed ortholog is 100%.
Bootstrap support for H2U391 as seed ortholog is 100%.

Group of orthologs #2196. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5K768              	100.00%		H2RNQ0              	100.00%
Bootstrap support for Q5K768 as seed ortholog is 100%.
Bootstrap support for H2RNQ0 as seed ortholog is 100%.

Group of orthologs #2197. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5K8B3              	100.00%		H2TFH2              	100.00%
Bootstrap support for Q5K8B3 as seed ortholog is 100%.
Bootstrap support for H2TFH2 as seed ortholog is 100%.

Group of orthologs #2198. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5KF64              	100.00%		H2T0Z3              	100.00%
Bootstrap support for Q5KF64 as seed ortholog is 100%.
Bootstrap support for H2T0Z3 as seed ortholog is 100%.

Group of orthologs #2199. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubripes:61

Q5KJ14              	100.00%		H2SQK0              	100.00%
Bootstrap support for Q5KJ14 as seed ortholog is 100%.
Bootstrap support for H2SQK0 as seed ortholog is 100%.

Group of orthologs #2200. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:60

P0CM36              	100.00%		H2RL07              	100.00%
Bootstrap support for P0CM36 as seed ortholog is 100%.
Bootstrap support for H2RL07 as seed ortholog is 100%.

Group of orthologs #2201. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:60

Q5KLA8              	100.00%		H2RUE2              	100.00%
Bootstrap support for Q5KLA8 as seed ortholog is 100%.
Bootstrap support for H2RUE2 as seed ortholog is 100%.

Group of orthologs #2202. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:60

Q5K9B7              	100.00%		H2TEH6              	100.00%
Bootstrap support for Q5K9B7 as seed ortholog is 100%.
Bootstrap support for H2TEH6 as seed ortholog is 100%.

Group of orthologs #2203. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:60

Q5KKH5              	100.00%		H2SJG2              	100.00%
Bootstrap support for Q5KKH5 as seed ortholog is 100%.
Bootstrap support for H2SJG2 as seed ortholog is 100%.

Group of orthologs #2204. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubripes:60

Q5KG96              	100.00%		H2T9G8              	100.00%
Bootstrap support for Q5KG96 as seed ortholog is 100%.
Bootstrap support for H2T9G8 as seed ortholog is 100%.

Group of orthologs #2205. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:59

Q5KJ78              	100.00%		H2V210              	100.00%
Q5KE36              	16.59%		Q6QQT1              	90.33%
Q5KE37              	16.15%		H2TW98              	16.58%
Bootstrap support for Q5KJ78 as seed ortholog is 100%.
Bootstrap support for H2V210 as seed ortholog is 100%.

Group of orthologs #2206. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:59

Q5KG38              	100.00%		H2RLE5              	100.00%
Bootstrap support for Q5KG38 as seed ortholog is 100%.
Bootstrap support for H2RLE5 as seed ortholog is 100%.

Group of orthologs #2207. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:59

P0CR96              	100.00%		H2SJJ4              	100.00%
Bootstrap support for P0CR96 as seed ortholog is 100%.
Bootstrap support for H2SJJ4 as seed ortholog is 100%.

Group of orthologs #2208. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:2

Q5KKV7              	100.00%		H2T3R1              	100.00%
Bootstrap support for Q5KKV7 as seed ortholog is 100%.
Bootstrap support for H2T3R1 as seed ortholog is 48%.
Alternative seed ortholog is H2S5Q5 (2 bits away from this cluster)

Group of orthologs #2209. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubripes:59

Q5KH95              	100.00%		H2UCM0              	100.00%
Bootstrap support for Q5KH95 as seed ortholog is 100%.
Bootstrap support for H2UCM0 as seed ortholog is 100%.

Group of orthologs #2210. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubripes:58

Q5KMK7              	100.00%		H2STA6              	100.00%
Bootstrap support for Q5KMK7 as seed ortholog is 100%.
Bootstrap support for H2STA6 as seed ortholog is 100%.

Group of orthologs #2211. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubripes:58

Q5K930              	100.00%		H2UXL0              	100.00%
Bootstrap support for Q5K930 as seed ortholog is 100%.
Bootstrap support for H2UXL0 as seed ortholog is 100%.

Group of orthologs #2212. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubripes:58

Q5KJJ6              	100.00%		H2UR03              	100.00%
Bootstrap support for Q5KJJ6 as seed ortholog is 100%.
Bootstrap support for H2UR03 as seed ortholog is 100%.

Group of orthologs #2213. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubripes:57

Q5K954              	100.00%		H2V732              	100.00%
                    	       		H2U6B6              	63.27%
Bootstrap support for Q5K954 as seed ortholog is 100%.
Bootstrap support for H2V732 as seed ortholog is 100%.

Group of orthologs #2214. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubripes:57

P0CS72              	100.00%		H2SE38              	100.00%
Bootstrap support for P0CS72 as seed ortholog is 100%.
Bootstrap support for H2SE38 as seed ortholog is 100%.

Group of orthologs #2215. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubripes:57

Q5KDT6              	100.00%		H2TCU6              	100.00%
Bootstrap support for Q5KDT6 as seed ortholog is 100%.
Bootstrap support for H2TCU6 as seed ortholog is 100%.

Group of orthologs #2216. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubripes:56

Q5K788              	100.00%		H2UK71              	100.00%
                    	       		H2SYA3              	7.31%
Bootstrap support for Q5K788 as seed ortholog is 100%.
Bootstrap support for H2UK71 as seed ortholog is 100%.

Group of orthologs #2217. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubripes:56

Q5KE76              	100.00%		H2S930              	100.00%
Bootstrap support for Q5KE76 as seed ortholog is 100%.
Bootstrap support for H2S930 as seed ortholog is 100%.

Group of orthologs #2218. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubripes:56

Q5KLG2              	100.00%		H2TVA8              	100.00%
Bootstrap support for Q5KLG2 as seed ortholog is 100%.
Bootstrap support for H2TVA8 as seed ortholog is 100%.

Group of orthologs #2219. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubripes:56

Q5KLZ5              	100.00%		H2TU40              	100.00%
Bootstrap support for Q5KLZ5 as seed ortholog is 100%.
Bootstrap support for H2TU40 as seed ortholog is 100%.

Group of orthologs #2220. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubripes:56

Q5KBN3              	100.00%		H2V2Y1              	100.00%
Bootstrap support for Q5KBN3 as seed ortholog is 100%.
Bootstrap support for H2V2Y1 as seed ortholog is 100%.

Group of orthologs #2221. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubripes:55

Q5KEZ0              	100.00%		H2TLP4              	100.00%
                    	       		H2V0M9              	100.00%
                    	       		H2SIZ8              	25.16%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for H2TLP4 as seed ortholog is 100%.
Bootstrap support for H2V0M9 as seed ortholog is 100%.

Group of orthologs #2222. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubripes:55

Q5KFB2              	100.00%		H2SIL8              	100.00%
Bootstrap support for Q5KFB2 as seed ortholog is 100%.
Bootstrap support for H2SIL8 as seed ortholog is 100%.

Group of orthologs #2223. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubripes:55

Q5K762              	100.00%		H2UZV6              	100.00%
Bootstrap support for Q5K762 as seed ortholog is 100%.
Bootstrap support for H2UZV6 as seed ortholog is 100%.

Group of orthologs #2224. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:54

Q5KK26              	100.00%		H2SEJ9              	100.00%
Bootstrap support for Q5KK26 as seed ortholog is 100%.
Bootstrap support for H2SEJ9 as seed ortholog is 100%.

Group of orthologs #2225. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:54

Q5KAA4              	100.00%		H2U3M3              	100.00%
Bootstrap support for Q5KAA4 as seed ortholog is 100%.
Bootstrap support for H2U3M3 as seed ortholog is 100%.

Group of orthologs #2226. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:54

Q5K9K5              	100.00%		H2UAC5              	100.00%
Bootstrap support for Q5K9K5 as seed ortholog is 100%.
Bootstrap support for H2UAC5 as seed ortholog is 100%.

Group of orthologs #2227. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubripes:54

Q5KK23              	100.00%		H2UWX0              	100.00%
Bootstrap support for Q5KK23 as seed ortholog is 100%.
Bootstrap support for H2UWX0 as seed ortholog is 100%.

Group of orthologs #2228. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubripes:53

Q5KCT6              	100.00%		H2SF26              	100.00%
Bootstrap support for Q5KCT6 as seed ortholog is 100%.
Bootstrap support for H2SF26 as seed ortholog is 100%.

Group of orthologs #2229. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubripes:53

Q5KF36              	100.00%		H2SQV3              	100.00%
Bootstrap support for Q5KF36 as seed ortholog is 100%.
Bootstrap support for H2SQV3 as seed ortholog is 100%.

Group of orthologs #2230. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubripes:53

Q5KJY5              	100.00%		H2SYB7              	100.00%
Bootstrap support for Q5KJY5 as seed ortholog is 100%.
Bootstrap support for H2SYB7 as seed ortholog is 100%.

Group of orthologs #2231. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubripes:11

Q5KAZ1              	100.00%		H2ULP4              	100.00%
Bootstrap support for Q5KAZ1 as seed ortholog is 100%.
Bootstrap support for H2ULP4 as seed ortholog is 62%.
Alternative seed ortholog is H2UFC5 (11 bits away from this cluster)

Group of orthologs #2232. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubripes:52

Q5KBN1              	100.00%		H2SZF7              	100.00%
Q5KEW1              	31.66%		H2SL40              	40.85%
Bootstrap support for Q5KBN1 as seed ortholog is 100%.
Bootstrap support for H2SZF7 as seed ortholog is 100%.

Group of orthologs #2233. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:10 T.rubripes:52

Q5KMX0              	100.00%		H2TGG3              	100.00%
Q5KJN2              	41.86%		
Q5K874              	6.80%		
Bootstrap support for Q5KMX0 as seed ortholog is 48%.
Alternative seed ortholog is Q5KLZ2 (10 bits away from this cluster)
Bootstrap support for H2TGG3 as seed ortholog is 100%.

Group of orthologs #2234. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubripes:52

Q5KKV0              	100.00%		H2RP32              	100.00%
Bootstrap support for Q5KKV0 as seed ortholog is 100%.
Bootstrap support for H2RP32 as seed ortholog is 100%.

Group of orthologs #2235. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubripes:52

Q5KL26              	100.00%		H2SZH3              	100.00%
Bootstrap support for Q5KL26 as seed ortholog is 100%.
Bootstrap support for H2SZH3 as seed ortholog is 100%.

Group of orthologs #2236. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubripes:52

Q5KGX3              	100.00%		H2TX34              	100.00%
Bootstrap support for Q5KGX3 as seed ortholog is 100%.
Bootstrap support for H2TX34 as seed ortholog is 100%.

Group of orthologs #2237. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubripes:52

Q5KMR1              	100.00%		H2U3F7              	100.00%
Bootstrap support for Q5KMR1 as seed ortholog is 100%.
Bootstrap support for H2U3F7 as seed ortholog is 100%.

Group of orthologs #2238. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubripes:51

Q5KQ12              	100.00%		H2SQZ5              	100.00%
Q5KN14              	100.00%		H2S5G5              	100.00%
                    	       		H2SA28              	96.51%
Bootstrap support for Q5KQ12 as seed ortholog is 100%.
Bootstrap support for Q5KN14 as seed ortholog is 100%.
Bootstrap support for H2SQZ5 as seed ortholog is 100%.
Bootstrap support for H2S5G5 as seed ortholog is 100%.

Group of orthologs #2239. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubripes:51

Q5KEL7              	100.00%		H2SF95              	100.00%
                    	       		H2SYF1              	14.24%
                    	       		H2T0H6              	12.61%
Bootstrap support for Q5KEL7 as seed ortholog is 100%.
Bootstrap support for H2SF95 as seed ortholog is 100%.

Group of orthologs #2240. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubripes:51

Q5K8M3              	100.00%		H2T3G3              	100.00%
Bootstrap support for Q5K8M3 as seed ortholog is 100%.
Bootstrap support for H2T3G3 as seed ortholog is 100%.

Group of orthologs #2241. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubripes:51

Q5KNU7              	100.00%		H2SD53              	100.00%
Bootstrap support for Q5KNU7 as seed ortholog is 100%.
Bootstrap support for H2SD53 as seed ortholog is 100%.

Group of orthologs #2242. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubripes:51

Q5KJE9              	100.00%		H2UUB5              	100.00%
Bootstrap support for Q5KJE9 as seed ortholog is 100%.
Bootstrap support for H2UUB5 as seed ortholog is 100%.

Group of orthologs #2243. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:3

Q5KPB4              	100.00%		H2S939              	100.00%
                    	       		H2SJM9              	14.78%
Bootstrap support for Q5KPB4 as seed ortholog is 100%.
Bootstrap support for H2S939 as seed ortholog is 74%.
Alternative seed ortholog is H2UCL0 (3 bits away from this cluster)

Group of orthologs #2244. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

Q5KK49              	100.00%		H2T879              	100.00%
                    	       		H2SYK2              	47.34%
Bootstrap support for Q5KK49 as seed ortholog is 100%.
Bootstrap support for H2T879 as seed ortholog is 100%.

Group of orthologs #2245. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

Q5K8B9              	100.00%		I6L700              	100.00%
                    	       		O73747              	97.67%
Bootstrap support for Q5K8B9 as seed ortholog is 100%.
Bootstrap support for I6L700 as seed ortholog is 100%.

Group of orthologs #2246. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

Q5KGS8              	100.00%		H2SRH7              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for H2SRH7 as seed ortholog is 100%.

Group of orthologs #2247. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

P0CM84              	100.00%		H2TVZ5              	100.00%
Bootstrap support for P0CM84 as seed ortholog is 100%.
Bootstrap support for H2TVZ5 as seed ortholog is 100%.

Group of orthologs #2248. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

Q5KKA0              	100.00%		H2T126              	100.00%
Bootstrap support for Q5KKA0 as seed ortholog is 100%.
Bootstrap support for H2T126 as seed ortholog is 100%.

Group of orthologs #2249. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

Q5KCZ3              	100.00%		H2U460              	100.00%
Bootstrap support for Q5KCZ3 as seed ortholog is 100%.
Bootstrap support for H2U460 as seed ortholog is 100%.

Group of orthologs #2250. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubripes:50

Q5KGI7              	100.00%		H2VBZ4              	100.00%
Bootstrap support for Q5KGI7 as seed ortholog is 100%.
Bootstrap support for H2VBZ4 as seed ortholog is 100%.

Group of orthologs #2251. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:49

Q5KJJ5              	100.00%		H2U141              	100.00%
                    	       		H2U585              	38.50%
                    	       		H2U5Y9              	22.73%
                    	       		H2TNP9              	22.47%
                    	       		H2TMC1              	21.81%
                    	       		H2RS17              	19.32%
Bootstrap support for Q5KJJ5 as seed ortholog is 100%.
Bootstrap support for H2U141 as seed ortholog is 100%.

Group of orthologs #2252. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:49

Q5KPN1              	100.00%		H2T2P0              	100.00%
                    	       		H2SGA1              	39.22%
Bootstrap support for Q5KPN1 as seed ortholog is 100%.
Bootstrap support for H2T2P0 as seed ortholog is 100%.

Group of orthologs #2253. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:49

Q5K7R2              	100.00%		H2STB0              	100.00%
Bootstrap support for Q5K7R2 as seed ortholog is 100%.
Bootstrap support for H2STB0 as seed ortholog is 100%.

Group of orthologs #2254. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:49

P0CN68              	100.00%		H2T6W5              	100.00%
Bootstrap support for P0CN68 as seed ortholog is 100%.
Bootstrap support for H2T6W5 as seed ortholog is 100%.

Group of orthologs #2255. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:49

Q5KE46              	100.00%		H2TQ31              	100.00%
Bootstrap support for Q5KE46 as seed ortholog is 100%.
Bootstrap support for H2TQ31 as seed ortholog is 100%.

Group of orthologs #2256. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubripes:49

Q5KB75              	100.00%		H2UBW4              	100.00%
Bootstrap support for Q5KB75 as seed ortholog is 100%.
Bootstrap support for H2UBW4 as seed ortholog is 100%.

Group of orthologs #2257. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:48

Q5KC66              	100.00%		H2TFW4              	100.00%
                    	       		H2THD2              	35.50%
                    	       		H2THX2              	10.17%
Bootstrap support for Q5KC66 as seed ortholog is 100%.
Bootstrap support for H2TFW4 as seed ortholog is 100%.

Group of orthologs #2258. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:48

Q5KPI7              	100.00%		H2S1R8              	100.00%
                    	       		H2T6V2              	49.35%
Bootstrap support for Q5KPI7 as seed ortholog is 100%.
Bootstrap support for H2S1R8 as seed ortholog is 100%.

Group of orthologs #2259. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:48

Q5K6Z4              	100.00%		H2SJ52              	100.00%
Bootstrap support for Q5K6Z4 as seed ortholog is 100%.
Bootstrap support for H2SJ52 as seed ortholog is 100%.

Group of orthologs #2260. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubripes:48

Q5K779              	100.00%		H2TVI1              	100.00%
Bootstrap support for Q5K779 as seed ortholog is 100%.
Bootstrap support for H2TVI1 as seed ortholog is 100%.

Group of orthologs #2261. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubripes:47

Q5KM61              	100.00%		Q1KL18              	100.00%
                    	       		Q1KKZ9              	89.21%
                    	       		H2RRN4              	5.07%
Bootstrap support for Q5KM61 as seed ortholog is 100%.
Bootstrap support for Q1KL18 as seed ortholog is 100%.

Group of orthologs #2262. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubripes:47

Q5KNZ7              	100.00%		H2UCK1              	100.00%
Bootstrap support for Q5KNZ7 as seed ortholog is 100%.
Bootstrap support for H2UCK1 as seed ortholog is 100%.

Group of orthologs #2263. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubripes:47

Q5KH42              	100.00%		H2VB81              	100.00%
Bootstrap support for Q5KH42 as seed ortholog is 100%.
Bootstrap support for H2VB81 as seed ortholog is 100%.

Group of orthologs #2264. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubripes:46

Q5KPE2              	100.00%		H2U1X1              	100.00%
Bootstrap support for Q5KPE2 as seed ortholog is 100%.
Bootstrap support for H2U1X1 as seed ortholog is 100%.

Group of orthologs #2265. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubripes:45

Q5KF56              	100.00%		H2UXH8              	100.00%
                    	       		H2T8R6              	34.78%
Bootstrap support for Q5KF56 as seed ortholog is 100%.
Bootstrap support for H2UXH8 as seed ortholog is 100%.

Group of orthologs #2266. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubripes:45

Q5KKL9              	100.00%		H2RKJ8              	100.00%
Bootstrap support for Q5KKL9 as seed ortholog is 100%.
Bootstrap support for H2RKJ8 as seed ortholog is 100%.

Group of orthologs #2267. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubripes:45

Q5K848              	100.00%		H2SV42              	100.00%
Bootstrap support for Q5K848 as seed ortholog is 100%.
Bootstrap support for H2SV42 as seed ortholog is 100%.

Group of orthologs #2268. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:44

Q5KDW2              	100.00%		H2TC57              	100.00%
                    	       		H2TQA5              	11.69%
Bootstrap support for Q5KDW2 as seed ortholog is 100%.
Bootstrap support for H2TC57 as seed ortholog is 100%.

Group of orthologs #2269. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:44

Q5K7U9              	100.00%		H2U1Y6              	100.00%
                    	       		H2UFA4              	6.87%
Bootstrap support for Q5K7U9 as seed ortholog is 100%.
Bootstrap support for H2U1Y6 as seed ortholog is 100%.

Group of orthologs #2270. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:44

Q5KB46              	100.00%		H2SG76              	100.00%
Bootstrap support for Q5KB46 as seed ortholog is 100%.
Bootstrap support for H2SG76 as seed ortholog is 100%.

Group of orthologs #2271. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubripes:44

Q5KHR4              	100.00%		H2SFV1              	100.00%
Bootstrap support for Q5KHR4 as seed ortholog is 100%.
Bootstrap support for H2SFV1 as seed ortholog is 100%.

Group of orthologs #2272. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubripes:43

Q5KJT0              	100.00%		H2UXH9              	100.00%
                    	       		H2T338              	45.83%
Bootstrap support for Q5KJT0 as seed ortholog is 100%.
Bootstrap support for H2UXH9 as seed ortholog is 100%.

Group of orthologs #2273. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubripes:43

Q5KPW0              	100.00%		H2UL77              	100.00%
                    	       		H2RUE8              	27.21%
Bootstrap support for Q5KPW0 as seed ortholog is 100%.
Bootstrap support for H2UL77 as seed ortholog is 100%.

Group of orthologs #2274. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:42

Q5KK75              	100.00%		H2T4Z5              	100.00%
Bootstrap support for Q5KK75 as seed ortholog is 100%.
Bootstrap support for H2T4Z5 as seed ortholog is 100%.

Group of orthologs #2275. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:42

Q5KNJ4              	100.00%		H2TH79              	100.00%
Bootstrap support for Q5KNJ4 as seed ortholog is 100%.
Bootstrap support for H2TH79 as seed ortholog is 100%.

Group of orthologs #2276. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:42

Q5K7P3              	100.00%		H2URP2              	100.00%
Bootstrap support for Q5K7P3 as seed ortholog is 100%.
Bootstrap support for H2URP2 as seed ortholog is 100%.

Group of orthologs #2277. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubripes:42

Q5KG14              	100.00%		H2UQD4              	100.00%
Bootstrap support for Q5KG14 as seed ortholog is 100%.
Bootstrap support for H2UQD4 as seed ortholog is 100%.