###################################
398 groups of orthologs
511 in-paralogs from C.neoformans
446 in-paralogs from Synechocystis.sp.
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1453 bits
Score difference with first non-orthologous sequence - C.neoformans:1453 Synechocystis.sp.:295

Q5KA63              	100.00%		P55037              	100.00%
Bootstrap support for Q5KA63 as seed ortholog is 100%.
Bootstrap support for P55037 as seed ortholog is 99%.

Group of orthologs #2. Best score 1081 bits
Score difference with first non-orthologous sequence - C.neoformans:460 Synechocystis.sp.:1032

Q5KA04              	100.00%		P74690              	100.00%
Bootstrap support for Q5KA04 as seed ortholog is 100%.
Bootstrap support for P74690 as seed ortholog is 100%.

Group of orthologs #3. Best score 943 bits
Score difference with first non-orthologous sequence - C.neoformans:943 Synechocystis.sp.:943

Q5KL19              	100.00%		P74416              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for P74416 as seed ortholog is 100%.

Group of orthologs #4. Best score 802 bits
Score difference with first non-orthologous sequence - C.neoformans:375 Synechocystis.sp.:802

Q5KH79              	100.00%		Q55959              	100.00%
Bootstrap support for Q5KH79 as seed ortholog is 100%.
Bootstrap support for Q55959 as seed ortholog is 100%.

Group of orthologs #5. Best score 781 bits
Score difference with first non-orthologous sequence - C.neoformans:781 Synechocystis.sp.:781

Q5K7V3              	100.00%		Q55756              	100.00%
Bootstrap support for Q5K7V3 as seed ortholog is 100%.
Bootstrap support for Q55756 as seed ortholog is 100%.

Group of orthologs #6. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:24 Synechocystis.sp.:188

Q5KPH0              	100.00%		P74361              	100.00%
                    	       		P74459              	37.58%
Bootstrap support for Q5KPH0 as seed ortholog is 63%.
Alternative seed ortholog is Q5KDZ1 (24 bits away from this cluster)
Bootstrap support for P74361 as seed ortholog is 99%.

Group of orthologs #7. Best score 708 bits
Score difference with first non-orthologous sequence - C.neoformans:708 Synechocystis.sp.:708

P0CS22              	100.00%		P73061              	100.00%
Bootstrap support for P0CS22 as seed ortholog is 100%.
Bootstrap support for P73061 as seed ortholog is 100%.

Group of orthologs #8. Best score 693 bits
Score difference with first non-orthologous sequence - C.neoformans:693 Synechocystis.sp.:693

Q5KF07              	100.00%		P73511              	100.00%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for P73511 as seed ortholog is 100%.

Group of orthologs #9. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:381 Synechocystis.sp.:594

Q5K6Z8              	100.00%		P73505              	100.00%
Bootstrap support for Q5K6Z8 as seed ortholog is 100%.
Bootstrap support for P73505 as seed ortholog is 100%.

Group of orthologs #10. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:93 Synechocystis.sp.:659

Q5K8W5              	100.00%		P22358              	100.00%
                    	       		P73098              	18.99%
Bootstrap support for Q5K8W5 as seed ortholog is 99%.
Bootstrap support for P22358 as seed ortholog is 100%.

Group of orthologs #11. Best score 649 bits
Score difference with first non-orthologous sequence - C.neoformans:119 Synechocystis.sp.:577

Q5KJ21              	100.00%		P73282              	100.00%
Bootstrap support for Q5KJ21 as seed ortholog is 99%.
Bootstrap support for P73282 as seed ortholog is 100%.

Group of orthologs #12. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:457 Synechocystis.sp.:507

Q5KMF6              	100.00%		Q55522              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for Q55522 as seed ortholog is 100%.

Group of orthologs #13. Best score 611 bits
Score difference with first non-orthologous sequence - C.neoformans:458 Synechocystis.sp.:611

Q5KFU0              	100.00%		P26527              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for P26527 as seed ortholog is 100%.

Group of orthologs #14. Best score 607 bits
Score difference with first non-orthologous sequence - C.neoformans:471 Synechocystis.sp.:607

Q5KN48              	100.00%		Q55404              	100.00%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for Q55404 as seed ortholog is 100%.

Group of orthologs #15. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 Synechocystis.sp.:445

Q5K8D2              	100.00%		P74751              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for P74751 as seed ortholog is 100%.

Group of orthologs #16. Best score 573 bits
Score difference with first non-orthologous sequence - C.neoformans:388 Synechocystis.sp.:307

P0CN32              	100.00%		P74228              	100.00%
                    	       		P28371              	14.78%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for P74228 as seed ortholog is 100%.

Group of orthologs #17. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:565 Synechocystis.sp.:565

Q5KKV6              	100.00%		Q55674              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for Q55674 as seed ortholog is 100%.

Group of orthologs #18. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:445 Synechocystis.sp.:558

Q5KFB9              	100.00%		P27179              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for P27179 as seed ortholog is 100%.

Group of orthologs #19. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:437 Synechocystis.sp.:534

Q5KLW7              	100.00%		Q05972              	100.00%
                    	       		P22034              	25.20%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for Q05972 as seed ortholog is 100%.

Group of orthologs #20. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:272 Synechocystis.sp.:530

Q5KCL8              	100.00%		P74689              	100.00%
Bootstrap support for Q5KCL8 as seed ortholog is 100%.
Bootstrap support for P74689 as seed ortholog is 100%.

Group of orthologs #21. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:55 Synechocystis.sp.:339

Q5KCV6              	100.00%		Q59999              	100.00%
                    	       		P74062              	37.27%
Bootstrap support for Q5KCV6 as seed ortholog is 80%.
Bootstrap support for Q59999 as seed ortholog is 100%.

Group of orthologs #22. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 Synechocystis.sp.:514

Q5KF97              	100.00%		P74423              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for P74423 as seed ortholog is 100%.

Group of orthologs #23. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:351 Synechocystis.sp.:512

Q5KDQ7              	100.00%		P74227              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for P74227 as seed ortholog is 100%.

Group of orthologs #24. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:397 Synechocystis.sp.:503

Q5K9M8              	100.00%		P73375              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for P73375 as seed ortholog is 100%.

Group of orthologs #25. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:101 Synechocystis.sp.:482

Q5KLI4              	100.00%		P73437              	100.00%
                    	       		P72991              	8.66%
                    	       		P73179              	5.01%
                    	       		Q55700              	5.01%
Bootstrap support for Q5KLI4 as seed ortholog is 98%.
Bootstrap support for P73437 as seed ortholog is 100%.

Group of orthologs #26. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 Synechocystis.sp.:475

Q5K9E9              	100.00%		P49057              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for P49057 as seed ortholog is 100%.

Group of orthologs #27. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:318 Synechocystis.sp.:473

Q5KPM3              	100.00%		P54384              	100.00%
Bootstrap support for Q5KPM3 as seed ortholog is 100%.
Bootstrap support for P54384 as seed ortholog is 100%.

Group of orthologs #28. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:324 Synechocystis.sp.:200

Q5K722              	100.00%		P73241              	100.00%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for P73241 as seed ortholog is 99%.

Group of orthologs #29. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:346 Synechocystis.sp.:220

Q5KBA0              	100.00%		P73479              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for P73479 as seed ortholog is 100%.

Group of orthologs #30. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 Synechocystis.sp.:462

Q5KLA1              	100.00%		P74208              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for P74208 as seed ortholog is 100%.

Group of orthologs #31. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:375 Synechocystis.sp.:191

Q5KPJ5              	100.00%		P73913              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 100%.
Bootstrap support for P73913 as seed ortholog is 99%.

Group of orthologs #32. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:356 Synechocystis.sp.:447

Q5K7P9              	100.00%		P73138              	100.00%
Bootstrap support for Q5K7P9 as seed ortholog is 100%.
Bootstrap support for P73138 as seed ortholog is 100%.

Group of orthologs #33. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:443 Synechocystis.sp.:443

Q5KNJ3              	100.00%		Q59992              	100.00%
Bootstrap support for Q5KNJ3 as seed ortholog is 100%.
Bootstrap support for Q59992 as seed ortholog is 100%.

Group of orthologs #34. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 Synechocystis.sp.:441

Q5K9R3              	100.00%		P52208              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for P52208 as seed ortholog is 100%.

Group of orthologs #35. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 Synechocystis.sp.:422

Q5K9Y3              	100.00%		P74507              	100.00%
Bootstrap support for Q5K9Y3 as seed ortholog is 100%.
Bootstrap support for P74507 as seed ortholog is 100%.

Group of orthologs #36. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 Synechocystis.sp.:417

Q5KKT5              	100.00%		Q55160              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for Q55160 as seed ortholog is 100%.

Group of orthologs #37. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 Synechocystis.sp.:394

Q5KMU3              	100.00%		Q55806              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for Q55806 as seed ortholog is 100%.

Group of orthologs #38. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:202 Synechocystis.sp.:391

Q5KNR0              	100.00%		P72689              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for P72689 as seed ortholog is 100%.

Group of orthologs #39. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 Synechocystis.sp.:388

Q5KP62              	100.00%		P72871              	100.00%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for P72871 as seed ortholog is 100%.

Group of orthologs #40. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 Synechocystis.sp.:387

Q5KNE7              	100.00%		Q55528              	100.00%
Bootstrap support for Q5KNE7 as seed ortholog is 100%.
Bootstrap support for Q55528 as seed ortholog is 100%.

Group of orthologs #41. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:85 Synechocystis.sp.:93

P0CN74              	100.00%		P49433              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 99%.
Bootstrap support for P49433 as seed ortholog is 99%.

Group of orthologs #42. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:143 Synechocystis.sp.:384

Q5K8F5              	100.00%		P72662              	100.00%
Bootstrap support for Q5K8F5 as seed ortholog is 99%.
Bootstrap support for P72662 as seed ortholog is 100%.

Group of orthologs #43. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 Synechocystis.sp.:379

Q5KLA7              	100.00%		P77972              	100.00%
Q5KG11              	17.30%		
Bootstrap support for Q5KLA7 as seed ortholog is 100%.
Bootstrap support for P77972 as seed ortholog is 100%.

Group of orthologs #44. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 Synechocystis.sp.:371

Q5KCY4              	100.00%		P23353              	100.00%
Bootstrap support for Q5KCY4 as seed ortholog is 100%.
Bootstrap support for P23353 as seed ortholog is 100%.

Group of orthologs #45. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:370 Synechocystis.sp.:370

Q5KK33              	100.00%		P73257              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for P73257 as seed ortholog is 100%.

Group of orthologs #46. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 Synechocystis.sp.:359

P0CQ34              	100.00%		P73290              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for P73290 as seed ortholog is 100%.

Group of orthologs #47. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:265 Synechocystis.sp.:358

Q5KBB1              	100.00%		P73443              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for P73443 as seed ortholog is 100%.

Group of orthologs #48. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 Synechocystis.sp.:227

Q5K8C0              	100.00%		P54902              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for P54902 as seed ortholog is 100%.

Group of orthologs #49. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:250 Synechocystis.sp.:346

Q5K920              	100.00%		P73043              	100.00%
Bootstrap support for Q5K920 as seed ortholog is 100%.
Bootstrap support for P73043 as seed ortholog is 100%.

Group of orthologs #50. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 Synechocystis.sp.:343

Q5KAU8              	100.00%		P77962              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for P77962 as seed ortholog is 100%.

Group of orthologs #51. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 Synechocystis.sp.:342

Q5K7B4              	100.00%		P74232              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for P74232 as seed ortholog is 100%.

Group of orthologs #52. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 Synechocystis.sp.:340

Q5K952              	100.00%		P72797              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for P72797 as seed ortholog is 100%.

Group of orthologs #53. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 Synechocystis.sp.:339

Q5KE01              	100.00%		P74421              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for P74421 as seed ortholog is 100%.

Group of orthologs #54. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 Synechocystis.sp.:336

Q5KJ87              	100.00%		P74008              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for P74008 as seed ortholog is 100%.

Group of orthologs #55. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:209 Synechocystis.sp.:327

Q5KN13              	100.00%		P74586              	100.00%
Bootstrap support for Q5KN13 as seed ortholog is 100%.
Bootstrap support for P74586 as seed ortholog is 100%.

Group of orthologs #56. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 Synechocystis.sp.:325

Q5KNE3              	100.00%		P74741              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for P74741 as seed ortholog is 100%.

Group of orthologs #57. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 Synechocystis.sp.:314

Q5KII0              	100.00%		P72720              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for P72720 as seed ortholog is 100%.

Group of orthologs #58. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:180 Synechocystis.sp.:307

Q5K9D3              	100.00%		P73851              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 99%.
Bootstrap support for P73851 as seed ortholog is 100%.

Group of orthologs #59. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 Synechocystis.sp.:305

Q5KDP3              	100.00%		P73411              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for P73411 as seed ortholog is 100%.

Group of orthologs #60. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 Synechocystis.sp.:304

Q5KI64              	100.00%		P74024              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for P74024 as seed ortholog is 100%.

Group of orthologs #61. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 Synechocystis.sp.:303

Q5KJ46              	100.00%		P77973              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for P77973 as seed ortholog is 100%.

Group of orthologs #62. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 Synechocystis.sp.:302

Q5KKG6              	100.00%		Q55863              	100.00%
                    	       		P73534              	12.23%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for Q55863 as seed ortholog is 100%.

Group of orthologs #63. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 Synechocystis.sp.:93

Q5KF19              	100.00%		P20170              	100.00%
Bootstrap support for Q5KF19 as seed ortholog is 100%.
Bootstrap support for P20170 as seed ortholog is 98%.

Group of orthologs #64. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 Synechocystis.sp.:296

Q5KQ80              	100.00%		P74072              	100.00%
Bootstrap support for Q5KQ80 as seed ortholog is 100%.
Bootstrap support for P74072 as seed ortholog is 100%.

Group of orthologs #65. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 Synechocystis.sp.:295

Q5K9D4              	100.00%		P74752              	100.00%
Q5K9D8              	44.62%		
Bootstrap support for Q5K9D4 as seed ortholog is 100%.
Bootstrap support for P74752 as seed ortholog is 100%.

Group of orthologs #66. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 Synechocystis.sp.:292

Q5KCZ2              	100.00%		P27724              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for P27724 as seed ortholog is 100%.

Group of orthologs #67. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:130 Synechocystis.sp.:289

Q5KI80              	100.00%		P52276              	100.00%
Bootstrap support for Q5KI80 as seed ortholog is 99%.
Bootstrap support for P52276 as seed ortholog is 100%.

Group of orthologs #68. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 Synechocystis.sp.:287

Q5KCC3              	100.00%		P73071              	100.00%
Bootstrap support for Q5KCC3 as seed ortholog is 100%.
Bootstrap support for P73071 as seed ortholog is 100%.

Group of orthologs #69. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:193 Synechocystis.sp.:285

Q5KHW3              	100.00%		P74686              	100.00%
Q5KBF6              	14.57%		
Bootstrap support for Q5KHW3 as seed ortholog is 99%.
Bootstrap support for P74686 as seed ortholog is 100%.

Group of orthologs #70. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 Synechocystis.sp.:242

Q5K955              	100.00%		P73556              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for P73556 as seed ortholog is 100%.

Group of orthologs #71. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:56 Synechocystis.sp.:284

Q5KNM0              	100.00%		P73133              	100.00%
Bootstrap support for Q5KNM0 as seed ortholog is 91%.
Bootstrap support for P73133 as seed ortholog is 100%.

Group of orthologs #72. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:15 Synechocystis.sp.:282

Q5K9A8              	100.00%		P73769              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 73%.
Alternative seed ortholog is Q5K9J9 (15 bits away from this cluster)
Bootstrap support for P73769 as seed ortholog is 100%.

Group of orthologs #73. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:96 Synechocystis.sp.:279

Q5K8I1              	100.00%		P73405              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 99%.
Bootstrap support for P73405 as seed ortholog is 100%.

Group of orthologs #74. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:3 Synechocystis.sp.:279

Q5KDF5              	100.00%		P73340              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 99%.
Bootstrap support for P73340 as seed ortholog is 100%.

Group of orthologs #75. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:99 Synechocystis.sp.:274

Q5KAU0              	100.00%		P73758              	100.00%
Q5KJ82              	9.23%		P74317              	5.26%
Bootstrap support for Q5KAU0 as seed ortholog is 97%.
Bootstrap support for P73758 as seed ortholog is 100%.

Group of orthologs #76. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 Synechocystis.sp.:273

Q5KH76              	100.00%		P72848              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for P72848 as seed ortholog is 100%.

Group of orthologs #77. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 Synechocystis.sp.:33

Q5KHR6              	100.00%		Q6ZEV8              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for Q6ZEV8 as seed ortholog is 80%.

Group of orthologs #78. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:87 Synechocystis.sp.:273

Q5KP37              	100.00%		P73960              	100.00%
Bootstrap support for Q5KP37 as seed ortholog is 98%.
Bootstrap support for P73960 as seed ortholog is 100%.

Group of orthologs #79. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 Synechocystis.sp.:271

Q5KJY4              	100.00%		P73886              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for P73886 as seed ortholog is 100%.

Group of orthologs #80. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:182 Synechocystis.sp.:135

Q5KHX7              	100.00%		P73558              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 99%.
Bootstrap support for P73558 as seed ortholog is 99%.

Group of orthologs #81. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:27 Synechocystis.sp.:267

Q5KJV0              	100.00%		P73825              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 76%.
Bootstrap support for P73825 as seed ortholog is 100%.

Group of orthologs #82. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 Synechocystis.sp.:163

Q5KJH7              	100.00%		P73465              	100.00%
Bootstrap support for Q5KJH7 as seed ortholog is 100%.
Bootstrap support for P73465 as seed ortholog is 99%.

Group of orthologs #83. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 Synechocystis.sp.:265

Q5KK07              	100.00%		Q55621              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for Q55621 as seed ortholog is 100%.

Group of orthologs #84. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 Synechocystis.sp.:265

Q5KQ48              	100.00%		P74324              	100.00%
Bootstrap support for Q5KQ48 as seed ortholog is 100%.
Bootstrap support for P74324 as seed ortholog is 100%.

Group of orthologs #85. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 Synechocystis.sp.:263

Q5KGK1              	100.00%		P74240              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for P74240 as seed ortholog is 100%.

Group of orthologs #86. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:95 Synechocystis.sp.:43

Q5KHN7              	100.00%		P72740              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 97%.
Bootstrap support for P72740 as seed ortholog is 83%.

Group of orthologs #87. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 Synechocystis.sp.:262

Q5KEG8              	100.00%		P74215              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for P74215 as seed ortholog is 100%.

Group of orthologs #88. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:1 Synechocystis.sp.:260

P0CQ72              	100.00%		Q55804              	100.00%
P0CQ70              	53.10%		
Bootstrap support for P0CQ72 as seed ortholog is 82%.
Bootstrap support for Q55804 as seed ortholog is 100%.

Group of orthologs #89. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:86 Synechocystis.sp.:260

Q5K833              	100.00%		Q55811              	100.00%
Q5K840              	77.02%		
Bootstrap support for Q5K833 as seed ortholog is 97%.
Bootstrap support for Q55811 as seed ortholog is 100%.

Group of orthologs #90. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 Synechocystis.sp.:97

P0CL92              	100.00%		P73239              	100.00%
Q5KCX7              	7.51%		P73278              	5.20%
Bootstrap support for P0CL92 as seed ortholog is 100%.
Bootstrap support for P73239 as seed ortholog is 98%.

Group of orthologs #91. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 Synechocystis.sp.:120

Q5KMG1              	100.00%		P73400              	100.00%
Q5K8R8              	31.34%		P73533              	100.00%
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for P73400 as seed ortholog is 99%.
Bootstrap support for P73533 as seed ortholog is 99%.

Group of orthologs #92. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 Synechocystis.sp.:254

Q5KHK8              	100.00%		P73058              	100.00%
Bootstrap support for Q5KHK8 as seed ortholog is 100%.
Bootstrap support for P73058 as seed ortholog is 100%.

Group of orthologs #93. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 Synechocystis.sp.:253

Q5KIB7              	100.00%		P77965              	100.00%
Q5KC33              	18.51%		
Q5KEV8              	5.84%		
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for P77965 as seed ortholog is 100%.

Group of orthologs #94. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:204 Synechocystis.sp.:252

Q5KBQ7              	100.00%		P72580              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for P72580 as seed ortholog is 100%.

Group of orthologs #95. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 Synechocystis.sp.:250

Q5KK44              	100.00%		P74257              	100.00%
Q5KK43              	62.39%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for P74257 as seed ortholog is 100%.

Group of orthologs #96. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 Synechocystis.sp.:242

Q5KDX8              	100.00%		Q55848              	100.00%
Q5KCA3              	18.20%		
Bootstrap support for Q5KDX8 as seed ortholog is 100%.
Bootstrap support for Q55848 as seed ortholog is 100%.

Group of orthologs #97. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:82 Synechocystis.sp.:242

Q5KHS3              	100.00%		P73201              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 96%.
Bootstrap support for P73201 as seed ortholog is 100%.

Group of orthologs #98. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:100 Synechocystis.sp.:241

Q5KJQ8              	100.00%		P74468              	100.00%
Bootstrap support for Q5KJQ8 as seed ortholog is 96%.
Bootstrap support for P74468 as seed ortholog is 100%.

Group of orthologs #99. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:65 Synechocystis.sp.:240

Q5KKS0              	100.00%		Q55505              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 93%.
Bootstrap support for Q55505 as seed ortholog is 100%.

Group of orthologs #100. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 Synechocystis.sp.:239

Q5K899              	100.00%		P72834              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for P72834 as seed ortholog is 100%.

Group of orthologs #101. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 Synechocystis.sp.:238

Q5KNG6              	100.00%		P72955              	100.00%
Bootstrap support for Q5KNG6 as seed ortholog is 100%.
Bootstrap support for P72955 as seed ortholog is 100%.

Group of orthologs #102. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:32 Synechocystis.sp.:233

Q5KEX3              	100.00%		Q55585              	100.00%
Q5K8N2              	38.37%		
Q5KIR2              	31.51%		
Q5KBZ0              	7.50%		
Q5KIV9              	6.61%		
Bootstrap support for Q5KEX3 as seed ortholog is 78%.
Bootstrap support for Q55585 as seed ortholog is 100%.

Group of orthologs #103. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 Synechocystis.sp.:231

P0CO58              	100.00%		P73572              	100.00%
                    	       		P72980              	5.61%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for P73572 as seed ortholog is 100%.

Group of orthologs #104. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:60 Synechocystis.sp.:223

Q5K975              	100.00%		P74721              	100.00%
Bootstrap support for Q5K975 as seed ortholog is 93%.
Bootstrap support for P74721 as seed ortholog is 100%.

Group of orthologs #105. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 Synechocystis.sp.:222

Q5KCW4              	100.00%		P74275              	100.00%
Bootstrap support for Q5KCW4 as seed ortholog is 100%.
Bootstrap support for P74275 as seed ortholog is 100%.

Group of orthologs #106. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 Synechocystis.sp.:222

Q5KGH1              	100.00%		P74214              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for P74214 as seed ortholog is 100%.

Group of orthologs #107. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 Synechocystis.sp.:219

P0CM20              	100.00%		P74122              	100.00%
Bootstrap support for P0CM20 as seed ortholog is 100%.
Bootstrap support for P74122 as seed ortholog is 100%.

Group of orthologs #108. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 Synechocystis.sp.:218

Q5K9Z8              	100.00%		P73348              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 100%.
Bootstrap support for P73348 as seed ortholog is 100%.

Group of orthologs #109. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 Synechocystis.sp.:218

Q5KD59              	100.00%		P74258              	100.00%
Bootstrap support for Q5KD59 as seed ortholog is 100%.
Bootstrap support for P74258 as seed ortholog is 100%.

Group of orthologs #110. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 Synechocystis.sp.:216

Q5K7P6              	100.00%		P73137              	100.00%
Bootstrap support for Q5K7P6 as seed ortholog is 100%.
Bootstrap support for P73137 as seed ortholog is 100%.

Group of orthologs #111. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 Synechocystis.sp.:216

P0CN04              	100.00%		P74241              	100.00%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for P74241 as seed ortholog is 100%.

Group of orthologs #112. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 Synechocystis.sp.:82

Q5K726              	100.00%		Q59993              	100.00%
                    	       		P54416              	32.47%
                    	       		P74467              	6.06%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for Q59993 as seed ortholog is 99%.

Group of orthologs #113. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:58 Synechocystis.sp.:153

Q5KH94              	100.00%		P74308              	100.00%
Q5KI95              	48.58%		
Q5K9D1              	5.42%		
Bootstrap support for Q5KH94 as seed ortholog is 94%.
Bootstrap support for P74308 as seed ortholog is 99%.

Group of orthologs #114. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 Synechocystis.sp.:214

Q5KPU2              	100.00%		P0DJF8              	100.00%
Bootstrap support for Q5KPU2 as seed ortholog is 100%.
Bootstrap support for P0DJF8 as seed ortholog is 100%.

Group of orthologs #115. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 Synechocystis.sp.:214

Q5KP99              	100.00%		P77969              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for P77969 as seed ortholog is 100%.

Group of orthologs #116. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 Synechocystis.sp.:45

Q5KLT3              	100.00%		P53579              	100.00%
                    	       		P53580              	39.87%
Bootstrap support for Q5KLT3 as seed ortholog is 100%.
Bootstrap support for P53579 as seed ortholog is 94%.

Group of orthologs #117. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 Synechocystis.sp.:212

Q5KFH8              	100.00%		P54225              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for P54225 as seed ortholog is 100%.

Group of orthologs #118. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:104 Synechocystis.sp.:37

Q5KPU6              	100.00%		Q55493              	100.00%
Bootstrap support for Q5KPU6 as seed ortholog is 99%.
Bootstrap support for Q55493 as seed ortholog is 82%.

Group of orthologs #119. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:88 Synechocystis.sp.:211

Q5KFP5              	100.00%		Q55665              	100.00%
Bootstrap support for Q5KFP5 as seed ortholog is 98%.
Bootstrap support for Q55665 as seed ortholog is 100%.

Group of orthologs #120. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:18 Synechocystis.sp.:210

Q5KC79              	100.00%		P15729              	100.00%
Q5KGQ4              	50.26%		
Q5KKB7              	49.95%		
Q5KD28              	48.91%		
Q5K8W0              	46.72%		
Q5K6S8              	14.78%		
Q5KMZ2              	13.63%		
Q5KCC5              	13.32%		
Q5KA16              	11.03%		
Bootstrap support for Q5KC79 as seed ortholog is 64%.
Alternative seed ortholog is Q5KQ09 (18 bits away from this cluster)
Bootstrap support for P15729 as seed ortholog is 100%.

Group of orthologs #121. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 Synechocystis.sp.:210

Q5K7R6              	100.00%		P74702              	100.00%
Q5KH58              	18.28%		
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for P74702 as seed ortholog is 100%.

Group of orthologs #122. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:15 Synechocystis.sp.:158

Q5KMM0              	100.00%		P73789              	100.00%
Q5KML4              	52.83%		
Bootstrap support for Q5KMM0 as seed ortholog is 72%.
Alternative seed ortholog is P0CP82 (15 bits away from this cluster)
Bootstrap support for P73789 as seed ortholog is 100%.

Group of orthologs #123. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 Synechocystis.sp.:210

Q5K968              	100.00%		P74236              	100.00%
Bootstrap support for Q5K968 as seed ortholog is 100%.
Bootstrap support for P74236 as seed ortholog is 100%.

Group of orthologs #124. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 Synechocystis.sp.:209

P0CN82              	100.00%		P52981              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for P52981 as seed ortholog is 100%.

Group of orthologs #125. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 Synechocystis.sp.:208

Q5KMY7              	100.00%		P54224              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for P54224 as seed ortholog is 100%.

Group of orthologs #126. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 Synechocystis.sp.:207

P0CN40              	100.00%		P74497              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for P74497 as seed ortholog is 100%.

Group of orthologs #127. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 Synechocystis.sp.:207

Q5KK40              	100.00%		P54261              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for P54261 as seed ortholog is 100%.

Group of orthologs #128. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:70 Synechocystis.sp.:207

Q5KIM3              	100.00%		P74510              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 92%.
Bootstrap support for P74510 as seed ortholog is 100%.

Group of orthologs #129. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:52 Synechocystis.sp.:206

Q5KNK5              	100.00%		P73410              	100.00%
Bootstrap support for Q5KNK5 as seed ortholog is 72%.
Alternative seed ortholog is Q5KCX2 (52 bits away from this cluster)
Bootstrap support for P73410 as seed ortholog is 100%.

Group of orthologs #130. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:43 Synechocystis.sp.:204

Q5KQ29              	100.00%		P72770              	100.00%
Bootstrap support for Q5KQ29 as seed ortholog is 82%.
Bootstrap support for P72770 as seed ortholog is 100%.

Group of orthologs #131. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 Synechocystis.sp.:203

Q5KJ01              	100.00%		P74344              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for P74344 as seed ortholog is 100%.

Group of orthologs #132. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 Synechocystis.sp.:111

Q5KIJ3              	100.00%		Q79EF1              	100.00%
Bootstrap support for Q5KIJ3 as seed ortholog is 100%.
Bootstrap support for Q79EF1 as seed ortholog is 98%.

Group of orthologs #133. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:19 Synechocystis.sp.:200

Q5KCV4              	100.00%		Q6ZES0              	100.00%
Q5KDZ8              	22.58%		P73035              	18.71%
                    	       		P73828              	15.93%
                    	       		P73926              	7.64%
Bootstrap support for Q5KCV4 as seed ortholog is 66%.
Alternative seed ortholog is Q5KQ00 (19 bits away from this cluster)
Bootstrap support for Q6ZES0 as seed ortholog is 100%.

Group of orthologs #134. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 Synechocystis.sp.:200

Q5K9R5              	100.00%		Q55778              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for Q55778 as seed ortholog is 100%.

Group of orthologs #135. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 Synechocystis.sp.:67

Q5K9P5              	100.00%		P74707              	100.00%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for P74707 as seed ortholog is 97%.

Group of orthologs #136. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 Synechocystis.sp.:198

Q5KI52              	100.00%		P72926              	100.00%
Bootstrap support for Q5KI52 as seed ortholog is 100%.
Bootstrap support for P72926 as seed ortholog is 100%.

Group of orthologs #137. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:88 Synechocystis.sp.:198

Q5KES4              	100.00%		P74490              	100.00%
Bootstrap support for Q5KES4 as seed ortholog is 99%.
Bootstrap support for P74490 as seed ortholog is 100%.

Group of orthologs #138. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:43 Synechocystis.sp.:198

Q5KN70              	100.00%		P73821              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 89%.
Bootstrap support for P73821 as seed ortholog is 100%.

Group of orthologs #139. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 Synechocystis.sp.:195

Q5KK89              	100.00%		Q55774              	100.00%
Q5KNJ1              	20.93%		
Bootstrap support for Q5KK89 as seed ortholog is 100%.
Bootstrap support for Q55774 as seed ortholog is 100%.

Group of orthologs #140. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 Synechocystis.sp.:194

Q5KJ10              	100.00%		P74587              	100.00%
Bootstrap support for Q5KJ10 as seed ortholog is 100%.
Bootstrap support for P74587 as seed ortholog is 100%.

Group of orthologs #141. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:48 Synechocystis.sp.:193

Q5KJC6              	100.00%		P74770              	100.00%
Bootstrap support for Q5KJC6 as seed ortholog is 86%.
Bootstrap support for P74770 as seed ortholog is 100%.

Group of orthologs #142. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:17 Synechocystis.sp.:135

Q5KGY4              	100.00%		P53383              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 69%.
Alternative seed ortholog is P0CO88 (17 bits away from this cluster)
Bootstrap support for P53383 as seed ortholog is 99%.

Group of orthologs #143. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 Synechocystis.sp.:192

Q5KKQ0              	100.00%		P73660              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for P73660 as seed ortholog is 100%.

Group of orthologs #144. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 Synechocystis.sp.:76

P0CQ36              	100.00%		P74724              	100.00%
Bootstrap support for P0CQ36 as seed ortholog is 100%.
Bootstrap support for P74724 as seed ortholog is 96%.

Group of orthologs #145. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 Synechocystis.sp.:191

Q5KEW6              	100.00%		P73538              	100.00%
Bootstrap support for Q5KEW6 as seed ortholog is 100%.
Bootstrap support for P73538 as seed ortholog is 100%.

Group of orthologs #146. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 Synechocystis.sp.:191

Q5KNB0              	100.00%		P74438              	100.00%
Bootstrap support for Q5KNB0 as seed ortholog is 100%.
Bootstrap support for P74438 as seed ortholog is 100%.

Group of orthologs #147. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 Synechocystis.sp.:187

Q5KPM5              	100.00%		P54147              	100.00%
Q5KAF6              	29.33%		P72935              	18.02%
                    	       		P54148              	10.40%
Bootstrap support for Q5KPM5 as seed ortholog is 100%.
Bootstrap support for P54147 as seed ortholog is 100%.

Group of orthologs #148. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 Synechocystis.sp.:187

Q5KCH8              	100.00%		P74211              	100.00%
Bootstrap support for Q5KCH8 as seed ortholog is 100%.
Bootstrap support for P74211 as seed ortholog is 100%.

Group of orthologs #149. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:30 Synechocystis.sp.:187

Q5KGR6              	100.00%		P74494              	100.00%
Bootstrap support for Q5KGR6 as seed ortholog is 95%.
Bootstrap support for P74494 as seed ortholog is 100%.

Group of orthologs #150. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 Synechocystis.sp.:184

Q5KA07              	100.00%		P74311              	100.00%
Bootstrap support for Q5KA07 as seed ortholog is 100%.
Bootstrap support for P74311 as seed ortholog is 100%.

Group of orthologs #151. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 Synechocystis.sp.:183

Q5K7G9              	100.00%		Q55598              	100.00%
Bootstrap support for Q5K7G9 as seed ortholog is 100%.
Bootstrap support for Q55598 as seed ortholog is 100%.

Group of orthologs #152. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:137 Synechocystis.sp.:91

Q5KEB3              	100.00%		Q55624              	100.00%
Bootstrap support for Q5KEB3 as seed ortholog is 100%.
Bootstrap support for Q55624 as seed ortholog is 99%.

Group of orthologs #153. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:54 Synechocystis.sp.:178

Q5KP10              	100.00%		P80046              	100.00%
Q5KAD7              	21.53%		
Bootstrap support for Q5KP10 as seed ortholog is 73%.
Alternative seed ortholog is Q5KBZ1 (54 bits away from this cluster)
Bootstrap support for P80046 as seed ortholog is 100%.

Group of orthologs #154. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:14 Synechocystis.sp.:176

Q5K9L7              	100.00%		Q55124              	100.00%
Q5KMG8              	54.15%		
Bootstrap support for Q5K9L7 as seed ortholog is 63%.
Alternative seed ortholog is Q5KJD3 (14 bits away from this cluster)
Bootstrap support for Q55124 as seed ortholog is 100%.

Group of orthologs #155. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 Synechocystis.sp.:176

Q5KE92              	100.00%		Q55486              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for Q55486 as seed ortholog is 100%.

Group of orthologs #156. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 Synechocystis.sp.:172

P0CQ18              	100.00%		P74571              	100.00%
P0CQ20              	56.79%		
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for P74571 as seed ortholog is 100%.

Group of orthologs #157. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 Synechocystis.sp.:171

Q5KA58              	100.00%		Q6ZE69              	100.00%
Bootstrap support for Q5KA58 as seed ortholog is 100%.
Bootstrap support for Q6ZE69 as seed ortholog is 100%.

Group of orthologs #158. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:94 Synechocystis.sp.:119

Q5KNE6              	100.00%		P72903              	100.00%
Q5K809              	58.70%		
Bootstrap support for Q5KNE6 as seed ortholog is 98%.
Bootstrap support for P72903 as seed ortholog is 99%.

Group of orthologs #159. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 Synechocystis.sp.:169

Q5K9H6              	100.00%		P74477              	100.00%
Q5KGF6              	16.57%		
Bootstrap support for Q5K9H6 as seed ortholog is 100%.
Bootstrap support for P74477 as seed ortholog is 100%.

Group of orthologs #160. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 Synechocystis.sp.:99

Q5KIL7              	100.00%		P72933              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for P72933 as seed ortholog is 99%.

Group of orthologs #161. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 Synechocystis.sp.:168

P0CL98              	100.00%		P73162              	100.00%
Bootstrap support for P0CL98 as seed ortholog is 100%.
Bootstrap support for P73162 as seed ortholog is 100%.

Group of orthologs #162. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:25 Synechocystis.sp.:168

Q5KC09              	100.00%		P73004              	100.00%
Bootstrap support for Q5KC09 as seed ortholog is 73%.
Alternative seed ortholog is Q5KH65 (25 bits away from this cluster)
Bootstrap support for P73004 as seed ortholog is 100%.

Group of orthologs #163. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 Synechocystis.sp.:168

Q5KFA0              	100.00%		P29107              	100.00%
Bootstrap support for Q5KFA0 as seed ortholog is 100%.
Bootstrap support for P29107 as seed ortholog is 100%.

Group of orthologs #164. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:78 Synechocystis.sp.:167

Q5K7V8              	100.00%		P50027              	100.00%
                    	       		P73097              	9.98%
Bootstrap support for Q5K7V8 as seed ortholog is 63%.
Alternative seed ortholog is Q5KLR7 (78 bits away from this cluster)
Bootstrap support for P50027 as seed ortholog is 100%.

Group of orthologs #165. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:30 Synechocystis.sp.:37

Q5KHB8              	100.00%		P74250              	100.00%
Bootstrap support for Q5KHB8 as seed ortholog is 86%.
Bootstrap support for P74250 as seed ortholog is 91%.

Group of orthologs #166. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 Synechocystis.sp.:167

Q5KK78              	100.00%		P74301              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for P74301 as seed ortholog is 100%.

Group of orthologs #167. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 Synechocystis.sp.:167

Q5KN34              	100.00%		P73617              	100.00%
Bootstrap support for Q5KN34 as seed ortholog is 100%.
Bootstrap support for P73617 as seed ortholog is 100%.

Group of orthologs #168. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 Synechocystis.sp.:167

Q5KK62              	100.00%		P74782              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for P74782 as seed ortholog is 100%.

Group of orthologs #169. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 Synechocystis.sp.:163

Q5KFV9              	100.00%		P73334              	100.00%
Q5KGG3              	19.91%		
Q5KIF6              	13.02%		
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for P73334 as seed ortholog is 100%.

Group of orthologs #170. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:81 Synechocystis.sp.:163

Q5K6T2              	100.00%		P73623              	100.00%
Bootstrap support for Q5K6T2 as seed ortholog is 99%.
Bootstrap support for P73623 as seed ortholog is 100%.

Group of orthologs #171. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 Synechocystis.sp.:109

Q5KK45              	100.00%		Q55497              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for Q55497 as seed ortholog is 99%.

Group of orthologs #172. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:64 Synechocystis.sp.:161

Q5KD02              	100.00%		Q6ZE58              	100.00%
Bootstrap support for Q5KD02 as seed ortholog is 93%.
Bootstrap support for Q6ZE58 as seed ortholog is 100%.

Group of orthologs #173. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 Synechocystis.sp.:160

Q5KHQ9              	100.00%		Q55074              	100.00%
Bootstrap support for Q5KHQ9 as seed ortholog is 100%.
Bootstrap support for Q55074 as seed ortholog is 100%.

Group of orthologs #174. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 Synechocystis.sp.:157

Q5KGP7              	100.00%		P19050              	100.00%
                    	       		P17062              	39.71%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for P19050 as seed ortholog is 100%.

Group of orthologs #175. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 Synechocystis.sp.:157

P0CO22              	100.00%		P48054              	100.00%
Bootstrap support for P0CO22 as seed ortholog is 100%.
Bootstrap support for P48054 as seed ortholog is 100%.

Group of orthologs #176. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 Synechocystis.sp.:155

Q5KFS4              	100.00%		P74572              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for P74572 as seed ortholog is 100%.

Group of orthologs #177. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 Synechocystis.sp.:154

Q5KDR3              	100.00%		P74384              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for P74384 as seed ortholog is 100%.

Group of orthologs #178. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 Synechocystis.sp.:154

Q5KIL6              	100.00%		P73914              	100.00%
Bootstrap support for Q5KIL6 as seed ortholog is 100%.
Bootstrap support for P73914 as seed ortholog is 100%.

Group of orthologs #179. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:9 Synechocystis.sp.:68

Q5KPY2              	100.00%		P73574              	100.00%
Bootstrap support for Q5KPY2 as seed ortholog is 60%.
Alternative seed ortholog is Q5KLC5 (9 bits away from this cluster)
Bootstrap support for P73574 as seed ortholog is 97%.

Group of orthologs #180. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:107 Synechocystis.sp.:153

Q5K6X0              	100.00%		P74230              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 100%.
Bootstrap support for P74230 as seed ortholog is 100%.

Group of orthologs #181. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 Synechocystis.sp.:153

Q5KLU5              	100.00%		P52983              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for P52983 as seed ortholog is 100%.

Group of orthologs #182. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 Synechocystis.sp.:153

Q5KG36              	100.00%		Q59994              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for Q59994 as seed ortholog is 100%.

Group of orthologs #183. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 Synechocystis.sp.:152

Q5KDJ5              	100.00%		P73855              	100.00%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for P73855 as seed ortholog is 100%.

Group of orthologs #184. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 Synechocystis.sp.:152

Q5KL32              	100.00%		P54386              	100.00%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for P54386 as seed ortholog is 100%.

Group of orthologs #185. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:64 Synechocystis.sp.:151

Q5KN49              	100.00%		P73220              	100.00%
Q5KMN9              	14.11%		
Bootstrap support for Q5KN49 as seed ortholog is 89%.
Bootstrap support for P73220 as seed ortholog is 100%.

Group of orthologs #186. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 Synechocystis.sp.:151

Q5KLK0              	100.00%		P72779              	100.00%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for P72779 as seed ortholog is 100%.

Group of orthologs #187. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 Synechocystis.sp.:150

Q5KGJ6              	100.00%		P72940              	100.00%
Bootstrap support for Q5KGJ6 as seed ortholog is 100%.
Bootstrap support for P72940 as seed ortholog is 100%.

Group of orthologs #188. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:22 Synechocystis.sp.:150

Q5KLT5              	100.00%		P55175              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 72%.
Alternative seed ortholog is Q5KJU9 (22 bits away from this cluster)
Bootstrap support for P55175 as seed ortholog is 100%.

Group of orthologs #189. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:92 Synechocystis.sp.:150

Q5KNA0              	100.00%		P74106              	100.00%
Bootstrap support for Q5KNA0 as seed ortholog is 99%.
Bootstrap support for P74106 as seed ortholog is 100%.

Group of orthologs #190. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 Synechocystis.sp.:149

P0CR18              	100.00%		Q55766              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for Q55766 as seed ortholog is 100%.

Group of orthologs #191. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:40 Synechocystis.sp.:149

Q5KIZ5              	100.00%		P48576              	100.00%
Bootstrap support for Q5KIZ5 as seed ortholog is 85%.
Bootstrap support for P48576 as seed ortholog is 100%.

Group of orthologs #192. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:29 Synechocystis.sp.:147

Q5KCY2              	100.00%		P73842              	100.00%
Bootstrap support for Q5KCY2 as seed ortholog is 73%.
Alternative seed ortholog is Q5KJZ3 (29 bits away from this cluster)
Bootstrap support for P73842 as seed ortholog is 100%.

Group of orthologs #193. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 Synechocystis.sp.:146

Q5K8J3              	100.00%		P74281              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for P74281 as seed ortholog is 100%.

Group of orthologs #194. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:43 Synechocystis.sp.:146

Q5KGY0              	100.00%		P73317              	100.00%
Bootstrap support for Q5KGY0 as seed ortholog is 86%.
Bootstrap support for P73317 as seed ortholog is 100%.

Group of orthologs #195. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 Synechocystis.sp.:146

Q5KNF9              	100.00%		P74061              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for P74061 as seed ortholog is 100%.

Group of orthologs #196. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 Synechocystis.sp.:145

Q5KG66              	100.00%		P52876              	100.00%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for P52876 as seed ortholog is 100%.

Group of orthologs #197. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:5 Synechocystis.sp.:144

Q5KAM1              	100.00%		P73637              	100.00%
Bootstrap support for Q5KAM1 as seed ortholog is 54%.
Alternative seed ortholog is Q5KJF0 (5 bits away from this cluster)
Bootstrap support for P73637 as seed ortholog is 100%.

Group of orthologs #198. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:83 Synechocystis.sp.:47

P0CO20              	100.00%		Q55689              	100.00%
Q5KDW3              	12.16%		
Bootstrap support for P0CO20 as seed ortholog is 99%.
Bootstrap support for Q55689 as seed ortholog is 87%.

Group of orthologs #199. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:86 Synechocystis.sp.:72

Q5K8F4              	100.00%		Q55629              	100.00%
Bootstrap support for Q5K8F4 as seed ortholog is 93%.
Bootstrap support for Q55629 as seed ortholog is 98%.

Group of orthologs #200. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 Synechocystis.sp.:143

Q5KBM8              	100.00%		P74569              	100.00%
Bootstrap support for Q5KBM8 as seed ortholog is 100%.
Bootstrap support for P74569 as seed ortholog is 100%.

Group of orthologs #201. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 Synechocystis.sp.:143

Q5KK70              	100.00%		Q55515              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for Q55515 as seed ortholog is 100%.

Group of orthologs #202. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 Synechocystis.sp.:142

Q5KEN3              	100.00%		Q55956              	100.00%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for Q55956 as seed ortholog is 100%.

Group of orthologs #203. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 Synechocystis.sp.:140

Q5K850              	100.00%		P73755              	100.00%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for P73755 as seed ortholog is 100%.

Group of orthologs #204. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 Synechocystis.sp.:140

Q5KA28              	100.00%		P73374              	100.00%
Bootstrap support for Q5KA28 as seed ortholog is 100%.
Bootstrap support for P73374 as seed ortholog is 100%.

Group of orthologs #205. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 Synechocystis.sp.:140

Q5KBD4              	100.00%		P73646              	100.00%
Bootstrap support for Q5KBD4 as seed ortholog is 100%.
Bootstrap support for P73646 as seed ortholog is 100%.

Group of orthologs #206. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 Synechocystis.sp.:140

Q5KGQ8              	100.00%		P73320              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for P73320 as seed ortholog is 100%.

Group of orthologs #207. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 Synechocystis.sp.:140

Q5KHX0              	100.00%		P73935              	100.00%
Bootstrap support for Q5KHX0 as seed ortholog is 100%.
Bootstrap support for P73935 as seed ortholog is 100%.

Group of orthologs #208. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:27 Synechocystis.sp.:139

Q5KJK5              	100.00%		P73990              	100.00%
Q5KKI9              	10.87%		
Q5KN11              	10.52%		
Q5KLD5              	9.27%		
Bootstrap support for Q5KJK5 as seed ortholog is 84%.
Bootstrap support for P73990 as seed ortholog is 100%.

Group of orthologs #209. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 Synechocystis.sp.:138

Q5KHZ1              	100.00%		P72648              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for P72648 as seed ortholog is 100%.

Group of orthologs #210. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 Synechocystis.sp.:2

Q5KDF1              	100.00%		P72800              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for P72800 as seed ortholog is 57%.
Alternative seed ortholog is P72622 (2 bits away from this cluster)

Group of orthologs #211. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:27 Synechocystis.sp.:135

Q5KGX1              	100.00%		P72753              	100.00%
Bootstrap support for Q5KGX1 as seed ortholog is 82%.
Bootstrap support for P72753 as seed ortholog is 100%.

Group of orthologs #212. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:29 Synechocystis.sp.:134

Q5KKM6              	100.00%		P73349              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 73%.
Alternative seed ortholog is Q5KIU9 (29 bits away from this cluster)
Bootstrap support for P73349 as seed ortholog is 100%.

Group of orthologs #213. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:70 Synechocystis.sp.:134

Q5KKY6              	100.00%		Q6ZEN7              	100.00%
Bootstrap support for Q5KKY6 as seed ortholog is 91%.
Bootstrap support for Q6ZEN7 as seed ortholog is 100%.

Group of orthologs #214. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:61 Synechocystis.sp.:133

Q5K8I0              	100.00%		P72931              	100.00%
Bootstrap support for Q5K8I0 as seed ortholog is 91%.
Bootstrap support for P72931 as seed ortholog is 100%.

Group of orthologs #215. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 Synechocystis.sp.:133

Q5K716              	100.00%		Q55141              	100.00%
Bootstrap support for Q5K716 as seed ortholog is 100%.
Bootstrap support for Q55141 as seed ortholog is 100%.

Group of orthologs #216. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:45 Synechocystis.sp.:133

Q5KLF1              	100.00%		P52761              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 98%.
Bootstrap support for P52761 as seed ortholog is 100%.

Group of orthologs #217. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 Synechocystis.sp.:133

Q5KKU8              	100.00%		Q55500              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for Q55500 as seed ortholog is 100%.

Group of orthologs #218. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 Synechocystis.sp.:132

Q5KMA3              	100.00%		P54004              	100.00%
Bootstrap support for Q5KMA3 as seed ortholog is 100%.
Bootstrap support for P54004 as seed ortholog is 100%.

Group of orthologs #219. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:41 Synechocystis.sp.:81

Q5KQ79              	100.00%		Q55128              	100.00%
Bootstrap support for Q5KQ79 as seed ortholog is 86%.
Bootstrap support for Q55128 as seed ortholog is 97%.

Group of orthologs #220. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:85 Synechocystis.sp.:130

Q5KGD2              	100.00%		P74618              	100.00%
Q5KID2              	29.40%		
Bootstrap support for Q5KGD2 as seed ortholog is 99%.
Bootstrap support for P74618 as seed ortholog is 100%.

Group of orthologs #221. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:1 Synechocystis.sp.:62

Q5KJU4              	100.00%		Q6ZEQ1              	100.00%
Bootstrap support for Q5KJU4 as seed ortholog is 49%.
Alternative seed ortholog is Q5KMV5 (1 bits away from this cluster)
Bootstrap support for Q6ZEQ1 as seed ortholog is 96%.

Group of orthologs #222. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 Synechocystis.sp.:129

Q5KI33              	100.00%		P73863              	100.00%
                    	       		P74393              	6.78%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for P73863 as seed ortholog is 100%.

Group of orthologs #223. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:3 Synechocystis.sp.:129

Q5KHG2              	100.00%		P74756              	100.00%
Bootstrap support for Q5KHG2 as seed ortholog is 71%.
Alternative seed ortholog is Q5KH86 (3 bits away from this cluster)
Bootstrap support for P74756 as seed ortholog is 100%.

Group of orthologs #224. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 Synechocystis.sp.:128

Q5KA36              	100.00%		P73141              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for P73141 as seed ortholog is 100%.

Group of orthologs #225. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 Synechocystis.sp.:128

Q5KE15              	100.00%		P74286              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for P74286 as seed ortholog is 100%.

Group of orthologs #226. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:39 Synechocystis.sp.:126

Q5KKZ0              	100.00%		P74696              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 86%.
Bootstrap support for P74696 as seed ortholog is 100%.

Group of orthologs #227. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:20 Synechocystis.sp.:124

P0CO42              	100.00%		P73302              	100.00%
                    	       		P72641              	5.26%
Bootstrap support for P0CO42 as seed ortholog is 75%.
Bootstrap support for P73302 as seed ortholog is 100%.

Group of orthologs #228. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 Synechocystis.sp.:124

Q5KBS3              	100.00%		P77968              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for P77968 as seed ortholog is 100%.

Group of orthologs #229. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:14 Synechocystis.sp.:57

Q5KCJ8              	100.00%		P74598              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 66%.
Alternative seed ortholog is Q5KGF2 (14 bits away from this cluster)
Bootstrap support for P74598 as seed ortholog is 94%.

Group of orthologs #230. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 Synechocystis.sp.:63

Q5KKG2              	100.00%		P74158              	100.00%
Q5KDQ6              	9.70%		
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for P74158 as seed ortholog is 97%.

Group of orthologs #231. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 Synechocystis.sp.:123

P0CP96              	100.00%		P73037              	100.00%
Bootstrap support for P0CP96 as seed ortholog is 100%.
Bootstrap support for P73037 as seed ortholog is 100%.

Group of orthologs #232. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:9 Synechocystis.sp.:123

Q5KAB8              	100.00%		Q55187              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 47%.
Alternative seed ortholog is Q5KJG7 (9 bits away from this cluster)
Bootstrap support for Q55187 as seed ortholog is 100%.

Group of orthologs #233. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 Synechocystis.sp.:123

Q5KGD7              	100.00%		P73197              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for P73197 as seed ortholog is 100%.

Group of orthologs #234. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 Synechocystis.sp.:122

Q5K8R7              	100.00%		Q79EF2              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for Q79EF2 as seed ortholog is 100%.

Group of orthologs #235. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 Synechocystis.sp.:122

Q5KHX3              	100.00%		P74369              	100.00%
Bootstrap support for Q5KHX3 as seed ortholog is 100%.
Bootstrap support for P74369 as seed ortholog is 100%.

Group of orthologs #236. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 Synechocystis.sp.:121

Q5KAT0              	100.00%		Q55477              	100.00%
Bootstrap support for Q5KAT0 as seed ortholog is 100%.
Bootstrap support for Q55477 as seed ortholog is 100%.

Group of orthologs #237. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 Synechocystis.sp.:121

Q5KLW1              	100.00%		P72794              	100.00%
Bootstrap support for Q5KLW1 as seed ortholog is 100%.
Bootstrap support for P72794 as seed ortholog is 100%.

Group of orthologs #238. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 Synechocystis.sp.:120

Q5KH63              	100.00%		Q55953              	100.00%
Bootstrap support for Q5KH63 as seed ortholog is 100%.
Bootstrap support for Q55953 as seed ortholog is 100%.

Group of orthologs #239. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 Synechocystis.sp.:119

Q5KND5              	100.00%		P77961              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for P77961 as seed ortholog is 100%.

Group of orthologs #240. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 Synechocystis.sp.:118

P0CN02              	100.00%		Q55367              	100.00%
Bootstrap support for P0CN02 as seed ortholog is 100%.
Bootstrap support for Q55367 as seed ortholog is 100%.

Group of orthologs #241. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:72 Synechocystis.sp.:118

Q5KLM7              	100.00%		P73056              	100.00%
Bootstrap support for Q5KLM7 as seed ortholog is 99%.
Bootstrap support for P73056 as seed ortholog is 100%.

Group of orthologs #242. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 Synechocystis.sp.:117

Q5KMF3              	100.00%		P36237              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 100%.
Bootstrap support for P36237 as seed ortholog is 100%.

Group of orthologs #243. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 Synechocystis.sp.:116

P0CM24              	100.00%		Q55794              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for Q55794 as seed ortholog is 100%.

Group of orthologs #244. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 Synechocystis.sp.:116

Q5KEW3              	100.00%		Q55910              	100.00%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for Q55910 as seed ortholog is 100%.

Group of orthologs #245. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 Synechocystis.sp.:115

Q5KN95              	100.00%		P72927              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for P72927 as seed ortholog is 100%.

Group of orthologs #246. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:63 Synechocystis.sp.:114

Q5KB25              	100.00%		P72835              	100.00%
Bootstrap support for Q5KB25 as seed ortholog is 89%.
Bootstrap support for P72835 as seed ortholog is 100%.

Group of orthologs #247. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:22 Synechocystis.sp.:113

Q5KIW0              	100.00%		P74181              	100.00%
Q5KJX7              	14.07%		
Bootstrap support for Q5KIW0 as seed ortholog is 64%.
Alternative seed ortholog is Q5KDD7 (22 bits away from this cluster)
Bootstrap support for P74181 as seed ortholog is 100%.

Group of orthologs #248. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 Synechocystis.sp.:113

Q5KDM0              	100.00%		P73723              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for P73723 as seed ortholog is 100%.

Group of orthologs #249. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:8 Synechocystis.sp.:112

P0CQ14              	100.00%		P74034              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 56%.
Alternative seed ortholog is Q5KFY5 (8 bits away from this cluster)
Bootstrap support for P74034 as seed ortholog is 100%.

Group of orthologs #250. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 Synechocystis.sp.:112

Q5KAU9              	100.00%		P73810              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for P73810 as seed ortholog is 100%.

Group of orthologs #251. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 Synechocystis.sp.:112

Q5KM46              	100.00%		P73807              	100.00%
Bootstrap support for Q5KM46 as seed ortholog is 100%.
Bootstrap support for P73807 as seed ortholog is 100%.

Group of orthologs #252. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 Synechocystis.sp.:111

Q5KNV5              	100.00%		P73313              	100.00%
Bootstrap support for Q5KNV5 as seed ortholog is 100%.
Bootstrap support for P73313 as seed ortholog is 100%.

Group of orthologs #253. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 Synechocystis.sp.:110

Q5KK01              	100.00%		P74430              	100.00%
Bootstrap support for Q5KK01 as seed ortholog is 100%.
Bootstrap support for P74430 as seed ortholog is 100%.

Group of orthologs #254. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:15 Synechocystis.sp.:109

Q5KEY9              	100.00%		Q59990              	100.00%
Bootstrap support for Q5KEY9 as seed ortholog is 59%.
Alternative seed ortholog is Q5KFL8 (15 bits away from this cluster)
Bootstrap support for Q59990 as seed ortholog is 100%.

Group of orthologs #255. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 Synechocystis.sp.:108

Q5KED7              	100.00%		Q55159              	100.00%
Q5KG73              	8.86%		P73670              	17.29%
                    	       		P73669              	6.57%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for Q55159 as seed ortholog is 100%.

Group of orthologs #256. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 Synechocystis.sp.:108

Q5KAF1              	100.00%		P73015              	100.00%
Q5KHK5              	20.73%		
Q5KIZ1              	14.09%		
Bootstrap support for Q5KAF1 as seed ortholog is 100%.
Bootstrap support for P73015 as seed ortholog is 100%.

Group of orthologs #257. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:29 Synechocystis.sp.:108

Q5K7E4              	100.00%		P73757              	100.00%
Q5KFT6              	10.09%		
Bootstrap support for Q5K7E4 as seed ortholog is 65%.
Alternative seed ortholog is Q5KPY6 (29 bits away from this cluster)
Bootstrap support for P73757 as seed ortholog is 100%.

Group of orthologs #258. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 Synechocystis.sp.:108

Q5KC95              	100.00%		P72861              	100.00%
Bootstrap support for Q5KC95 as seed ortholog is 100%.
Bootstrap support for P72861 as seed ortholog is 100%.

Group of orthologs #259. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 Synechocystis.sp.:108

Q5KHA1              	100.00%		P17253              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for P17253 as seed ortholog is 100%.

Group of orthologs #260. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 Synechocystis.sp.:46

Q5KIC1              	100.00%		P73270              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for P73270 as seed ortholog is 86%.

Group of orthologs #261. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 Synechocystis.sp.:107

Q5K7B2              	100.00%		P73560              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for P73560 as seed ortholog is 100%.

Group of orthologs #262. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 Synechocystis.sp.:107

Q5KNF1              	100.00%		P74590              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for P74590 as seed ortholog is 100%.

Group of orthologs #263. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 Synechocystis.sp.:106

Q5KAX6              	100.00%		P72666              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for P72666 as seed ortholog is 100%.

Group of orthologs #264. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 Synechocystis.sp.:106

Q5KDQ4              	100.00%		P73306              	100.00%
Bootstrap support for Q5KDQ4 as seed ortholog is 100%.
Bootstrap support for P73306 as seed ortholog is 100%.

Group of orthologs #265. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 Synechocystis.sp.:106

Q5KIY3              	100.00%		Q55318              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for Q55318 as seed ortholog is 100%.

Group of orthologs #266. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 Synechocystis.sp.:105

Q5KQ45              	100.00%		Q59977              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for Q59977 as seed ortholog is 100%.

Group of orthologs #267. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 Synechocystis.sp.:104

Q5KB97              	100.00%		P72644              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for P72644 as seed ortholog is 100%.

Group of orthologs #268. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:55 Synechocystis.sp.:104

Q5KM48              	100.00%		P73294              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 99%.
Bootstrap support for P73294 as seed ortholog is 100%.

Group of orthologs #269. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 Synechocystis.sp.:104

Q5KJL2              	100.00%		Q55532              	100.00%
Bootstrap support for Q5KJL2 as seed ortholog is 100%.
Bootstrap support for Q55532 as seed ortholog is 100%.

Group of orthologs #270. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 Synechocystis.sp.:102

Q5K7R3              	100.00%		Q55174              	100.00%
Q5KGN2              	24.97%		
Q5KAP2              	23.26%		
Q5KDL3              	22.03%		
Q5KA27              	21.30%		
Q5KLV5              	20.69%		
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for Q55174 as seed ortholog is 100%.

Group of orthologs #271. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 Synechocystis.sp.:35

Q5KQ18              	100.00%		P72754              	100.00%
Q5KQ94              	100.00%		
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for P72754 as seed ortholog is 90%.

Group of orthologs #272. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 Synechocystis.sp.:102

Q5KE42              	100.00%		P74514              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for P74514 as seed ortholog is 100%.

Group of orthologs #273. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 Synechocystis.sp.:100

Q5KEY3              	100.00%		P72661              	100.00%
Q5KBK5              	33.30%		
Q5K758              	19.79%		
Bootstrap support for Q5KEY3 as seed ortholog is 100%.
Bootstrap support for P72661 as seed ortholog is 100%.

Group of orthologs #274. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:45 Synechocystis.sp.:100

Q5KL09              	100.00%		P73688              	100.00%
Bootstrap support for Q5KL09 as seed ortholog is 88%.
Bootstrap support for P73688 as seed ortholog is 100%.

Group of orthologs #275. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 Synechocystis.sp.:98

Q5KC50              	100.00%		P73495              	100.00%
Q5KPC4              	10.51%		
Bootstrap support for Q5KC50 as seed ortholog is 100%.
Bootstrap support for P73495 as seed ortholog is 100%.

Group of orthologs #276. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 Synechocystis.sp.:98

Q5KDL9              	100.00%		Q55383              	100.00%
Q5KDR0              	39.46%		
Bootstrap support for Q5KDL9 as seed ortholog is 100%.
Bootstrap support for Q55383 as seed ortholog is 100%.

Group of orthologs #277. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 Synechocystis.sp.:97

Q5KN57              	100.00%		P74614              	100.00%
Bootstrap support for Q5KN57 as seed ortholog is 100%.
Bootstrap support for P74614 as seed ortholog is 100%.

Group of orthologs #278. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 Synechocystis.sp.:97

Q5KNX1              	100.00%		Q55695              	100.00%
Bootstrap support for Q5KNX1 as seed ortholog is 100%.
Bootstrap support for Q55695 as seed ortholog is 100%.

Group of orthologs #279. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 Synechocystis.sp.:96

Q5KBT3              	100.00%		P52056              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for P52056 as seed ortholog is 100%.

Group of orthologs #280. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 Synechocystis.sp.:96

Q5KCU5              	100.00%		P74046              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for P74046 as seed ortholog is 100%.

Group of orthologs #281. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 Synechocystis.sp.:43

Q5KM94              	100.00%		P74336              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for P74336 as seed ortholog is 86%.

Group of orthologs #282. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 Synechocystis.sp.:94

Q5KKM8              	100.00%		P73033              	100.00%
Q5KPY7              	39.71%		
Bootstrap support for Q5KKM8 as seed ortholog is 100%.
Bootstrap support for P73033 as seed ortholog is 100%.

Group of orthologs #283. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 Synechocystis.sp.:94

Q5KK04              	100.00%		P73949              	100.00%
Q5KL75              	15.58%		
Bootstrap support for Q5KK04 as seed ortholog is 100%.
Bootstrap support for P73949 as seed ortholog is 100%.

Group of orthologs #284. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 Synechocystis.sp.:94

Q5KPB1              	100.00%		P74040              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for P74040 as seed ortholog is 100%.

Group of orthologs #285. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 Synechocystis.sp.:91

Q5KN42              	100.00%		P72945              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for P72945 as seed ortholog is 100%.

Group of orthologs #286. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 Synechocystis.sp.:90

Q5KF03              	100.00%		Q55924              	100.00%
Bootstrap support for Q5KF03 as seed ortholog is 100%.
Bootstrap support for Q55924 as seed ortholog is 100%.

Group of orthologs #287. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 Synechocystis.sp.:90

Q5KIC8              	100.00%		Q55482              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for Q55482 as seed ortholog is 100%.

Group of orthologs #288. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 Synechocystis.sp.:89

Q5K9A9              	100.00%		P74732              	100.00%
Q5K9L8              	48.74%		
Bootstrap support for Q5K9A9 as seed ortholog is 100%.
Bootstrap support for P74732 as seed ortholog is 100%.

Group of orthologs #289. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:12 Synechocystis.sp.:89

Q5KJU6              	100.00%		P73310              	100.00%
Bootstrap support for Q5KJU6 as seed ortholog is 66%.
Alternative seed ortholog is Q5K959 (12 bits away from this cluster)
Bootstrap support for P73310 as seed ortholog is 100%.

Group of orthologs #290. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 Synechocystis.sp.:27

Q5K9Q9              	100.00%		Q55196              	100.00%
                    	       		Q55195              	62.11%
                    	       		P73788              	48.68%
                    	       		P73721              	7.93%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for Q55196 as seed ortholog is 81%.

Group of orthologs #291. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:44 Synechocystis.sp.:88

Q5KB94              	100.00%		Q55813              	100.00%
Bootstrap support for Q5KB94 as seed ortholog is 95%.
Bootstrap support for Q55813 as seed ortholog is 100%.

Group of orthologs #292. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 Synechocystis.sp.:88

Q5KL73              	100.00%		Q57456              	100.00%
Bootstrap support for Q5KL73 as seed ortholog is 100%.
Bootstrap support for Q57456 as seed ortholog is 100%.

Group of orthologs #293. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 Synechocystis.sp.:87

Q5KPX1              	100.00%		P72818              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for P72818 as seed ortholog is 100%.

Group of orthologs #294. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 Synechocystis.sp.:86

Q5KAD9              	100.00%		P52986              	100.00%
Bootstrap support for Q5KAD9 as seed ortholog is 100%.
Bootstrap support for P52986 as seed ortholog is 100%.

Group of orthologs #295. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 Synechocystis.sp.:86

Q5KFI1              	100.00%		Q55736              	100.00%
Bootstrap support for Q5KFI1 as seed ortholog is 100%.
Bootstrap support for Q55736 as seed ortholog is 100%.

Group of orthologs #296. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:9 Synechocystis.sp.:86

Q5KKU0              	100.00%		Q55664              	100.00%
Bootstrap support for Q5KKU0 as seed ortholog is 61%.
Alternative seed ortholog is Q5KMW2 (9 bits away from this cluster)
Bootstrap support for Q55664 as seed ortholog is 100%.

Group of orthologs #297. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 Synechocystis.sp.:86

Q5KPK7              	100.00%		Q55512              	100.00%
Bootstrap support for Q5KPK7 as seed ortholog is 100%.
Bootstrap support for Q55512 as seed ortholog is 100%.

Group of orthologs #298. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:13 Synechocystis.sp.:85

Q5KP75              	100.00%		P74745              	100.00%
Q5KD75              	9.96%		
Bootstrap support for Q5KP75 as seed ortholog is 80%.
Bootstrap support for P74745 as seed ortholog is 100%.

Group of orthologs #299. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:33 Synechocystis.sp.:85

Q5KKW4              	100.00%		P73308              	100.00%
Bootstrap support for Q5KKW4 as seed ortholog is 90%.
Bootstrap support for P73308 as seed ortholog is 100%.

Group of orthologs #300. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 Synechocystis.sp.:85

Q5KKF6              	100.00%		P74153              	100.00%
Bootstrap support for Q5KKF6 as seed ortholog is 100%.
Bootstrap support for P74153 as seed ortholog is 100%.

Group of orthologs #301. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 Synechocystis.sp.:84

Q5KFN0              	100.00%		P74133              	100.00%
                    	       		P72849              	38.10%
Bootstrap support for Q5KFN0 as seed ortholog is 100%.
Bootstrap support for P74133 as seed ortholog is 100%.

Group of orthologs #302. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 Synechocystis.sp.:84

Q5KF86              	100.00%		P73527              	100.00%
Bootstrap support for Q5KF86 as seed ortholog is 100%.
Bootstrap support for P73527 as seed ortholog is 100%.

Group of orthologs #303. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 Synechocystis.sp.:84

Q5KGC2              	100.00%		Q55163              	100.00%
Bootstrap support for Q5KGC2 as seed ortholog is 100%.
Bootstrap support for Q55163 as seed ortholog is 100%.

Group of orthologs #304. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 Synechocystis.sp.:83

Q5KEQ7              	100.00%		Q6ZEP4              	100.00%
Q5KM31              	44.52%		
Q5KM49              	17.83%		
Q5KFI9              	6.64%		
Bootstrap support for Q5KEQ7 as seed ortholog is 100%.
Bootstrap support for Q6ZEP4 as seed ortholog is 100%.

Group of orthologs #305. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 Synechocystis.sp.:83

Q5KKG7              	100.00%		P36236              	100.00%
Bootstrap support for Q5KKG7 as seed ortholog is 100%.
Bootstrap support for P36236 as seed ortholog is 100%.

Group of orthologs #306. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 Synechocystis.sp.:83

Q5KGK3              	100.00%		Q55132              	100.00%
Bootstrap support for Q5KGK3 as seed ortholog is 100%.
Bootstrap support for Q55132 as seed ortholog is 100%.

Group of orthologs #307. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:9 Synechocystis.sp.:37

P0CR36              	100.00%		Q55596              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 60%.
Alternative seed ortholog is Q5KML8 (9 bits away from this cluster)
Bootstrap support for Q55596 as seed ortholog is 91%.

Group of orthologs #308. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 Synechocystis.sp.:82

Q5KGD0              	100.00%		P72731              	100.00%
Bootstrap support for Q5KGD0 as seed ortholog is 100%.
Bootstrap support for P72731 as seed ortholog is 100%.

Group of orthologs #309. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 Synechocystis.sp.:81

Q5KB67              	100.00%		Q55595              	100.00%
Bootstrap support for Q5KB67 as seed ortholog is 100%.
Bootstrap support for Q55595 as seed ortholog is 100%.

Group of orthologs #310. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:37 Synechocystis.sp.:81

Q5KDS6              	100.00%		Q57014              	100.00%
Bootstrap support for Q5KDS6 as seed ortholog is 93%.
Bootstrap support for Q57014 as seed ortholog is 100%.

Group of orthologs #311. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 Synechocystis.sp.:80

Q5KF65              	100.00%		P72702              	100.00%
Q5KD72              	47.42%		
Q5KKR8              	45.29%		
Q5KCS8              	41.37%		
Q5K8L3              	9.42%		
Bootstrap support for Q5KF65 as seed ortholog is 100%.
Bootstrap support for P72702 as seed ortholog is 100%.

Group of orthologs #312. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 Synechocystis.sp.:80

Q5KI67              	100.00%		Q55589              	100.00%
Q5KC30              	14.60%		
Bootstrap support for Q5KI67 as seed ortholog is 100%.
Bootstrap support for Q55589 as seed ortholog is 100%.

Group of orthologs #313. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 Synechocystis.sp.:80

Q5KK61              	100.00%		Q55172              	100.00%
Bootstrap support for Q5KK61 as seed ortholog is 100%.
Bootstrap support for Q55172 as seed ortholog is 100%.

Group of orthologs #314. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 Synechocystis.sp.:79

Q5KM39              	100.00%		P74388              	100.00%
                    	       		Q55809              	13.17%
Bootstrap support for Q5KM39 as seed ortholog is 100%.
Bootstrap support for P74388 as seed ortholog is 100%.

Group of orthologs #315. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:12 Synechocystis.sp.:79

Q5K7B5              	100.00%		P74643              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 61%.
Alternative seed ortholog is Q5KH62 (12 bits away from this cluster)
Bootstrap support for P74643 as seed ortholog is 100%.

Group of orthologs #316. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 Synechocystis.sp.:79

Q5KBB0              	100.00%		P73303              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for P73303 as seed ortholog is 100%.

Group of orthologs #317. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 Synechocystis.sp.:22

Q5KAS2              	100.00%		Q55907              	100.00%
Bootstrap support for Q5KAS2 as seed ortholog is 100%.
Bootstrap support for Q55907 as seed ortholog is 81%.

Group of orthologs #318. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 Synechocystis.sp.:79

Q5KN26              	100.00%		P72808              	100.00%
Bootstrap support for Q5KN26 as seed ortholog is 100%.
Bootstrap support for P72808 as seed ortholog is 100%.

Group of orthologs #319. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 Synechocystis.sp.:79

Q5KND2              	100.00%		P73685              	100.00%
Bootstrap support for Q5KND2 as seed ortholog is 100%.
Bootstrap support for P73685 as seed ortholog is 100%.

Group of orthologs #320. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:23 Synechocystis.sp.:79

Q5KK88              	100.00%		Q55702              	100.00%
Bootstrap support for Q5KK88 as seed ortholog is 71%.
Alternative seed ortholog is Q5KPJ0 (23 bits away from this cluster)
Bootstrap support for Q55702 as seed ortholog is 100%.

Group of orthologs #321. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 Synechocystis.sp.:78

P0CO18              	100.00%		Q6YRV7              	100.00%
Q5K960              	12.27%		
Q5KCX1              	9.36%		
Q5KII1              	7.02%		
Q5KHC6              	5.13%		
Bootstrap support for P0CO18 as seed ortholog is 100%.
Bootstrap support for Q6YRV7 as seed ortholog is 100%.

Group of orthologs #322. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 Synechocystis.sp.:78

Q5KPF3              	100.00%		P74432              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for P74432 as seed ortholog is 100%.

Group of orthologs #323. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:11 Synechocystis.sp.:77

Q5KK76              	100.00%		Q55513              	100.00%
Q5KDS4              	14.89%		
Q5KBM7              	8.46%		
Bootstrap support for Q5KK76 as seed ortholog is 63%.
Alternative seed ortholog is Q5KA86 (11 bits away from this cluster)
Bootstrap support for Q55513 as seed ortholog is 100%.

Group of orthologs #324. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 Synechocystis.sp.:77

Q5KI10              	100.00%		P74071              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for P74071 as seed ortholog is 100%.

Group of orthologs #325. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:23 Synechocystis.sp.:76

Q5K862              	100.00%		P74041              	100.00%
Q5KD32              	100.00%		
Q5KD31              	61.82%		
Q5K861              	61.21%		
Q5KJE2              	52.58%		
Q5KH90              	35.15%		
Bootstrap support for Q5K862 as seed ortholog is 69%.
Alternative seed ortholog is Q5K8E7 (23 bits away from this cluster)
Bootstrap support for Q5KD32 as seed ortholog is 71%.
Alternative seed ortholog is Q5K8E7 (23 bits away from this cluster)
Bootstrap support for P74041 as seed ortholog is 100%.

Group of orthologs #326. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 Synechocystis.sp.:76

P0CM88              	100.00%		Q55470              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for Q55470 as seed ortholog is 100%.

Group of orthologs #327. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 Synechocystis.sp.:76

Q5K8Y7              	100.00%		Q55478              	100.00%
Bootstrap support for Q5K8Y7 as seed ortholog is 100%.
Bootstrap support for Q55478 as seed ortholog is 100%.

Group of orthologs #328. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 Synechocystis.sp.:76

Q5KJJ0              	100.00%		P74003              	100.00%
Bootstrap support for Q5KJJ0 as seed ortholog is 100%.
Bootstrap support for P74003 as seed ortholog is 100%.

Group of orthologs #329. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 Synechocystis.sp.:76

Q5KIG1              	100.00%		Q55575              	100.00%
Bootstrap support for Q5KIG1 as seed ortholog is 100%.
Bootstrap support for Q55575 as seed ortholog is 100%.

Group of orthologs #330. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 Synechocystis.sp.:75

Q5KCH7              	100.00%		P54735              	100.00%
Q5KB17              	16.15%		
Q5KCS4              	10.66%		
Q5KPY0              	9.89%		
Q5KI66              	7.58%		
Q5KM47              	6.26%		
Q5KDH2              	5.05%		
Q5KP84              	5.05%		
Bootstrap support for Q5KCH7 as seed ortholog is 100%.
Bootstrap support for P54735 as seed ortholog is 100%.

Group of orthologs #331. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 Synechocystis.sp.:75

Q5KGU9              	100.00%		P74074              	100.00%
                    	       		Q55727              	50.79%
Bootstrap support for Q5KGU9 as seed ortholog is 100%.
Bootstrap support for P74074 as seed ortholog is 100%.

Group of orthologs #332. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 Synechocystis.sp.:23

Q5K8Z0              	100.00%		P72655              	100.00%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for P72655 as seed ortholog is 82%.

Group of orthologs #333. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 Synechocystis.sp.:74

Q5KK52              	100.00%		Q54735              	100.00%
Q5K8R3              	20.28%		
Bootstrap support for Q5KK52 as seed ortholog is 100%.
Bootstrap support for Q54735 as seed ortholog is 100%.

Group of orthologs #334. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 Synechocystis.sp.:74

Q5KCL3              	100.00%		Q9FAB3              	100.00%
Bootstrap support for Q5KCL3 as seed ortholog is 100%.
Bootstrap support for Q9FAB3 as seed ortholog is 100%.

Group of orthologs #335. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 Synechocystis.sp.:17

Q5KG59              	100.00%		Q55816              	100.00%
                    	       		P22040              	15.38%
                    	       		P72626              	14.55%
                    	       		Q55619              	13.88%
                    	       		P73329              	8.53%
                    	       		Q55614              	6.35%
                    	       		Q55740              	5.52%
                    	       		Q79EE4              	5.35%
                    	       		P72710              	5.18%
                    	       		Q55281              	5.18%
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for Q55816 as seed ortholog is 67%.
Alternative seed ortholog is P73898 (17 bits away from this cluster)

Group of orthologs #336. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:24 Synechocystis.sp.:73

Q5K8L2              	100.00%		Q59987              	100.00%
Bootstrap support for Q5K8L2 as seed ortholog is 74%.
Alternative seed ortholog is Q5KMV5 (24 bits away from this cluster)
Bootstrap support for Q59987 as seed ortholog is 100%.

Group of orthologs #337. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 Synechocystis.sp.:73

Q5KFT0              	100.00%		P73298              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for P73298 as seed ortholog is 100%.

Group of orthologs #338. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 Synechocystis.sp.:73

Q5KP80              	100.00%		P74125              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for P74125 as seed ortholog is 100%.

Group of orthologs #339. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 Synechocystis.sp.:72

P0CR26              	100.00%		Q57396              	100.00%
P0CR28              	32.45%		
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for Q57396 as seed ortholog is 100%.

Group of orthologs #340. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 Synechocystis.sp.:72

Q5K813              	100.00%		P73679              	100.00%
Bootstrap support for Q5K813 as seed ortholog is 100%.
Bootstrap support for P73679 as seed ortholog is 100%.

Group of orthologs #341. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 Synechocystis.sp.:20

Q5KL07              	100.00%		P52232              	100.00%
Bootstrap support for Q5KL07 as seed ortholog is 100%.
Bootstrap support for P52232 as seed ortholog is 87%.

Group of orthologs #342. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 Synechocystis.sp.:71

Q5KGH8              	100.00%		P73212              	100.00%
Q5KGH9              	76.40%		
Q5KGH7              	48.33%		
Q5KE39              	8.93%		
Bootstrap support for Q5KGH8 as seed ortholog is 100%.
Bootstrap support for P73212 as seed ortholog is 100%.

Group of orthologs #343. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:19 Synechocystis.sp.:71

Q5K9H2              	100.00%		P73316              	100.00%
Bootstrap support for Q5K9H2 as seed ortholog is 85%.
Bootstrap support for P73316 as seed ortholog is 100%.

Group of orthologs #344. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 Synechocystis.sp.:71

Q5KEN0              	100.00%		Q55548              	100.00%
Bootstrap support for Q5KEN0 as seed ortholog is 100%.
Bootstrap support for Q55548 as seed ortholog is 100%.

Group of orthologs #345. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 Synechocystis.sp.:71

Q5KLY6              	100.00%		Q55535              	100.00%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for Q55535 as seed ortholog is 100%.

Group of orthologs #346. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 Synechocystis.sp.:70

Q5KH50              	100.00%		P73335              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for P73335 as seed ortholog is 100%.

Group of orthologs #347. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:15 Synechocystis.sp.:69

Q5KFU2              	100.00%		P73717              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 72%.
Alternative seed ortholog is Q5KB08 (15 bits away from this cluster)
Bootstrap support for P73717 as seed ortholog is 100%.

Group of orthologs #348. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 Synechocystis.sp.:69

Q5KI93              	100.00%		Q55364              	100.00%
Bootstrap support for Q5KI93 as seed ortholog is 100%.
Bootstrap support for Q55364 as seed ortholog is 100%.

Group of orthologs #349. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:8 Synechocystis.sp.:68

Q5KBU4              	100.00%		P72953              	100.00%
Bootstrap support for Q5KBU4 as seed ortholog is 59%.
Alternative seed ortholog is Q5K7G1 (8 bits away from this cluster)
Bootstrap support for P72953 as seed ortholog is 100%.

Group of orthologs #350. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 Synechocystis.sp.:68

Q5K6V6              	100.00%		Q55480              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for Q55480 as seed ortholog is 100%.

Group of orthologs #351. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 Synechocystis.sp.:67

Q5KK55              	100.00%		P52231              	100.00%
                    	       		P73263              	15.23%
Bootstrap support for Q5KK55 as seed ortholog is 100%.
Bootstrap support for P52231 as seed ortholog is 100%.

Group of orthologs #352. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 Synechocystis.sp.:66

Q5KC34              	100.00%		P73469              	100.00%
Q5KHE5              	33.54%		P74297              	15.55%
P0CP66              	32.19%		
P0CP68              	28.62%		
Q5KKV1              	13.02%		
Q5KCA0              	13.02%		
Q5KAZ9              	12.53%		
Q5KP65              	12.29%		
Q5K6Z2              	12.04%		
Q5KMR8              	10.93%		
Q5KF69              	7.74%		
P0CS76              	7.74%		
Bootstrap support for Q5KC34 as seed ortholog is 100%.
Bootstrap support for P73469 as seed ortholog is 100%.

Group of orthologs #353. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 Synechocystis.sp.:66

Q5KGM0              	100.00%		P74654              	100.00%
                    	       		P54984              	25.51%
Bootstrap support for Q5KGM0 as seed ortholog is 100%.
Bootstrap support for P74654 as seed ortholog is 100%.

Group of orthologs #354. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 Synechocystis.sp.:66

Q5KCC7              	100.00%		P74290              	100.00%
Bootstrap support for Q5KCC7 as seed ortholog is 100%.
Bootstrap support for P74290 as seed ortholog is 100%.

Group of orthologs #355. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 Synechocystis.sp.:65

Q5K761              	100.00%		P54691              	100.00%
Q5KD20              	23.85%		
Bootstrap support for Q5K761 as seed ortholog is 100%.
Bootstrap support for P54691 as seed ortholog is 100%.

Group of orthologs #356. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 Synechocystis.sp.:65

P0CL94              	100.00%		P73192              	100.00%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for P73192 as seed ortholog is 100%.

Group of orthologs #357. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 Synechocystis.sp.:64

Q5KJY3              	100.00%		Q6ZEM3              	100.00%
                    	       		Q6YRX0              	98.24%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for Q6ZEM3 as seed ortholog is 100%.

Group of orthologs #358. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 Synechocystis.sp.:64

Q5KFR7              	100.00%		P72649              	100.00%
Bootstrap support for Q5KFR7 as seed ortholog is 100%.
Bootstrap support for P72649 as seed ortholog is 100%.

Group of orthologs #359. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 Synechocystis.sp.:64

Q5KK13              	100.00%		Q55593              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for Q55593 as seed ortholog is 100%.

Group of orthologs #360. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 Synechocystis.sp.:63

P0CS18              	100.00%		P74805              	100.00%
Bootstrap support for P0CS18 as seed ortholog is 100%.
Bootstrap support for P74805 as seed ortholog is 100%.

Group of orthologs #361. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 Synechocystis.sp.:62

Q5KGT0              	100.00%		P73784              	100.00%
Q5K977              	50.00%		
Bootstrap support for Q5KGT0 as seed ortholog is 100%.
Bootstrap support for P73784 as seed ortholog is 100%.

Group of orthologs #362. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 Synechocystis.sp.:62

Q5KC84              	100.00%		P73728              	100.00%
Bootstrap support for Q5KC84 as seed ortholog is 100%.
Bootstrap support for P73728 as seed ortholog is 100%.

Group of orthologs #363. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 Synechocystis.sp.:61

Q5K9R1              	100.00%		P73504              	100.00%
Bootstrap support for Q5K9R1 as seed ortholog is 100%.
Bootstrap support for P73504 as seed ortholog is 100%.

Group of orthologs #364. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 Synechocystis.sp.:60

P0CN38              	100.00%		P74070              	100.00%
Bootstrap support for P0CN38 as seed ortholog is 100%.
Bootstrap support for P74070 as seed ortholog is 100%.

Group of orthologs #365. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 Synechocystis.sp.:60

Q5K905              	100.00%		P74498              	100.00%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for P74498 as seed ortholog is 100%.

Group of orthologs #366. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 Synechocystis.sp.:60

Q5KJX2              	100.00%		P73125              	100.00%
Bootstrap support for Q5KJX2 as seed ortholog is 100%.
Bootstrap support for P73125 as seed ortholog is 100%.

Group of orthologs #367. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 Synechocystis.sp.:57

Q5KJW8              	100.00%		P73557              	100.00%
                    	       		Q55765              	5.36%
Bootstrap support for Q5KJW8 as seed ortholog is 100%.
Bootstrap support for P73557 as seed ortholog is 100%.

Group of orthologs #368. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 Synechocystis.sp.:57

Q5K8M7              	100.00%		P73299              	100.00%
Bootstrap support for Q5K8M7 as seed ortholog is 100%.
Bootstrap support for P73299 as seed ortholog is 100%.

Group of orthologs #369. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 Synechocystis.sp.:57

Q5KJI8              	100.00%		Q55653              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for Q55653 as seed ortholog is 100%.

Group of orthologs #370. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:11 Synechocystis.sp.:56

Q5KAZ1              	100.00%		Q55139              	100.00%
Bootstrap support for Q5KAZ1 as seed ortholog is 63%.
Alternative seed ortholog is Q5K7H9 (11 bits away from this cluster)
Bootstrap support for Q55139 as seed ortholog is 100%.

Group of orthologs #371. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 Synechocystis.sp.:56

Q5KLA4              	100.00%		P73481              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for P73481 as seed ortholog is 100%.

Group of orthologs #372. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 Synechocystis.sp.:54

Q5K7N9              	100.00%		P74737              	100.00%
Q5KNC3              	42.37%		
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for P74737 as seed ortholog is 100%.

Group of orthologs #373. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 Synechocystis.sp.:54

Q5KI56              	100.00%		P20804              	100.00%
Q5KI30              	14.41%		
Bootstrap support for Q5KI56 as seed ortholog is 100%.
Bootstrap support for P20804 as seed ortholog is 100%.

Group of orthologs #374. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 Synechocystis.sp.:54

P0CS95              	100.00%		Q55574              	100.00%
Bootstrap support for P0CS95 as seed ortholog is 100%.
Bootstrap support for Q55574 as seed ortholog is 100%.

Group of orthologs #375. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 Synechocystis.sp.:54

Q5K9T9              	100.00%		P74746              	100.00%
Bootstrap support for Q5K9T9 as seed ortholog is 100%.
Bootstrap support for P74746 as seed ortholog is 100%.

Group of orthologs #376. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 Synechocystis.sp.:54

Q5KNI1              	100.00%		P73163              	100.00%
Bootstrap support for Q5KNI1 as seed ortholog is 100%.
Bootstrap support for P73163 as seed ortholog is 100%.

Group of orthologs #377. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 Synechocystis.sp.:53

Q5KHF9              	100.00%		P80507              	100.00%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for P80507 as seed ortholog is 100%.

Group of orthologs #378. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 Synechocystis.sp.:52

P0CS80              	100.00%		P73161              	100.00%
Bootstrap support for P0CS80 as seed ortholog is 100%.
Bootstrap support for P73161 as seed ortholog is 100%.

Group of orthologs #379. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 Synechocystis.sp.:52

Q5K9S4              	100.00%		P72896              	100.00%
Bootstrap support for Q5K9S4 as seed ortholog is 100%.
Bootstrap support for P72896 as seed ortholog is 100%.

Group of orthologs #380. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 Synechocystis.sp.:52

Q5KCT3              	100.00%		P74331              	100.00%
Bootstrap support for Q5KCT3 as seed ortholog is 100%.
Bootstrap support for P74331 as seed ortholog is 100%.

Group of orthologs #381. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 Synechocystis.sp.:52

Q5KJ42              	100.00%		P72934              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 100%.
Bootstrap support for P72934 as seed ortholog is 100%.

Group of orthologs #382. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 Synechocystis.sp.:51

Q5KJZ1              	100.00%		P72660              	100.00%
                    	       		P73157              	34.18%
Bootstrap support for Q5KJZ1 as seed ortholog is 100%.
Bootstrap support for P72660 as seed ortholog is 100%.

Group of orthologs #383. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 Synechocystis.sp.:49

Q5KCZ5              	100.00%		P36239              	100.00%
Bootstrap support for Q5KCZ5 as seed ortholog is 100%.
Bootstrap support for P36239 as seed ortholog is 100%.

Group of orthologs #384. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 Synechocystis.sp.:49

Q5KJR0              	100.00%		Q55474              	100.00%
Bootstrap support for Q5KJR0 as seed ortholog is 100%.
Bootstrap support for Q55474 as seed ortholog is 100%.

Group of orthologs #385. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 Synechocystis.sp.:49

Q5KJY8              	100.00%		Q55484              	100.00%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for Q55484 as seed ortholog is 100%.

Group of orthologs #386. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 Synechocystis.sp.:49

Q5KNB6              	100.00%		P74068              	100.00%
Bootstrap support for Q5KNB6 as seed ortholog is 100%.
Bootstrap support for P74068 as seed ortholog is 100%.

Group of orthologs #387. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 Synechocystis.sp.:48

Q5KA70              	100.00%		P72658              	100.00%
Bootstrap support for Q5KA70 as seed ortholog is 100%.
Bootstrap support for P72658 as seed ortholog is 100%.

Group of orthologs #388. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 Synechocystis.sp.:47

Q5KI15              	100.00%		P73377              	100.00%
Bootstrap support for Q5KI15 as seed ortholog is 100%.
Bootstrap support for P73377 as seed ortholog is 100%.

Group of orthologs #389. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 Synechocystis.sp.:46

Q5KBH4              	100.00%		P72657              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for P72657 as seed ortholog is 100%.

Group of orthologs #390. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 Synechocystis.sp.:45

Q5K947              	100.00%		P74229              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for P74229 as seed ortholog is 100%.

Group of orthologs #391. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 Synechocystis.sp.:45

Q5KEZ0              	100.00%		Q55626              	100.00%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for Q55626 as seed ortholog is 100%.

Group of orthologs #392. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 Synechocystis.sp.:45

Q5KNH2              	100.00%		P73311              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for P73311 as seed ortholog is 100%.

Group of orthologs #393. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 Synechocystis.sp.:45

Q5KKY5              	100.00%		P74226              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for P74226 as seed ortholog is 100%.

Group of orthologs #394. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 Synechocystis.sp.:43

Q5KDX5              	100.00%		P74389              	100.00%
Q5K796              	27.78%		
Q5KCE8              	20.06%		
Q5KLQ5              	10.49%		
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for P74389 as seed ortholog is 100%.

Group of orthologs #395. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 Synechocystis.sp.:43

P0CM52              	100.00%		Q55712              	100.00%
Bootstrap support for P0CM52 as seed ortholog is 100%.
Bootstrap support for Q55712 as seed ortholog is 100%.

Group of orthologs #396. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 Synechocystis.sp.:43

Q5K9B2              	100.00%		P74292              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for P74292 as seed ortholog is 100%.

Group of orthologs #397. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 Synechocystis.sp.:42

Q5KGS8              	100.00%		P73521              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for P73521 as seed ortholog is 100%.

Group of orthologs #398. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 Synechocystis.sp.:42

Q5KJX4              	100.00%		Q55764              	100.00%
Bootstrap support for Q5KJX4 as seed ortholog is 100%.
Bootstrap support for Q55764 as seed ortholog is 100%.