###################################
1515 groups of orthologs
1662 in-paralogs from C.neoformans
1781 in-paralogs from S.invicta
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3755 bits
Score difference with first non-orthologous sequence - C.neoformans:3755 S.invicta:2395

Q5KFR9              	100.00%		E9IXU4              	100.00%
Bootstrap support for Q5KFR9 as seed ortholog is 100%.
Bootstrap support for E9IXU4 as seed ortholog is 100%.

Group of orthologs #2. Best score 2144 bits
Score difference with first non-orthologous sequence - C.neoformans:2144 S.invicta:2144

Q5KA63              	100.00%		E9IS98              	100.00%
Bootstrap support for Q5KA63 as seed ortholog is 100%.
Bootstrap support for E9IS98 as seed ortholog is 100%.

Group of orthologs #3. Best score 1985 bits
Score difference with first non-orthologous sequence - C.neoformans:1985 S.invicta:1985

Q5KA29              	100.00%		E9ILW4              	100.00%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for E9ILW4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1919 bits
Score difference with first non-orthologous sequence - C.neoformans:1107 S.invicta:911

Q5KET5              	100.00%		E9IWL3              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for E9IWL3 as seed ortholog is 100%.

Group of orthologs #5. Best score 1723 bits
Score difference with first non-orthologous sequence - C.neoformans:993 S.invicta:1723

Q5KGG3              	100.00%		E9IBL8              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for E9IBL8 as seed ortholog is 100%.

Group of orthologs #6. Best score 1695 bits
Score difference with first non-orthologous sequence - C.neoformans:1695 S.invicta:1695

P0CN26              	100.00%		E9IXS3              	100.00%
Bootstrap support for P0CN26 as seed ortholog is 100%.
Bootstrap support for E9IXS3 as seed ortholog is 100%.

Group of orthologs #7. Best score 1601 bits
Score difference with first non-orthologous sequence - C.neoformans:1601 S.invicta:1601

Q5KEY7              	100.00%		E9IGV3              	100.00%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for E9IGV3 as seed ortholog is 100%.

Group of orthologs #8. Best score 1321 bits
Score difference with first non-orthologous sequence - C.neoformans:1321 S.invicta:1321

Q5KFC9              	100.00%		E9I854              	100.00%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for E9I854 as seed ortholog is 100%.

Group of orthologs #9. Best score 1280 bits
Score difference with first non-orthologous sequence - C.neoformans:1280 S.invicta:1280

Q5KBW5              	100.00%		E9IZA5              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for E9IZA5 as seed ortholog is 100%.

Group of orthologs #10. Best score 1232 bits
Score difference with first non-orthologous sequence - C.neoformans:554 S.invicta:1232

Q5KC33              	100.00%		E9J5Y8              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for E9J5Y8 as seed ortholog is 100%.

Group of orthologs #11. Best score 1222 bits
Score difference with first non-orthologous sequence - C.neoformans:488 S.invicta:1222

Q5KJ25              	100.00%		E9IGS5              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for E9IGS5 as seed ortholog is 100%.

Group of orthologs #12. Best score 1221 bits
Score difference with first non-orthologous sequence - C.neoformans:1221 S.invicta:1221

Q5KEH7              	100.00%		E9JAW6              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for E9JAW6 as seed ortholog is 100%.

Group of orthologs #13. Best score 1184 bits
Score difference with first non-orthologous sequence - C.neoformans:725 S.invicta:790

Q5KA71              	100.00%		E9IAW4              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for E9IAW4 as seed ortholog is 100%.

Group of orthologs #14. Best score 1183 bits
Score difference with first non-orthologous sequence - C.neoformans:1183 S.invicta:1183

Q5KP97              	100.00%		E9J360              	100.00%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for E9J360 as seed ortholog is 100%.

Group of orthologs #15. Best score 1178 bits
Score difference with first non-orthologous sequence - C.neoformans:1178 S.invicta:1178

Q5KFT2              	100.00%		E9IEU1              	100.00%
Bootstrap support for Q5KFT2 as seed ortholog is 100%.
Bootstrap support for E9IEU1 as seed ortholog is 100%.

Group of orthologs #16. Best score 1166 bits
Score difference with first non-orthologous sequence - C.neoformans:541 S.invicta:1166

Q5KGT3              	100.00%		E9J412              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for E9J412 as seed ortholog is 100%.

Group of orthologs #17. Best score 1150 bits
Score difference with first non-orthologous sequence - C.neoformans:1150 S.invicta:1150

P0CR22              	100.00%		E9IIH8              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for E9IIH8 as seed ortholog is 100%.

Group of orthologs #18. Best score 1140 bits
Score difference with first non-orthologous sequence - C.neoformans:1140 S.invicta:1140

Q5K9W1              	100.00%		E9IA59              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for E9IA59 as seed ortholog is 100%.

Group of orthologs #19. Best score 1112 bits
Score difference with first non-orthologous sequence - C.neoformans:1112 S.invicta:1112

Q5KHJ9              	100.00%		E9JB57              	100.00%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for E9JB57 as seed ortholog is 100%.

Group of orthologs #20. Best score 1105 bits
Score difference with first non-orthologous sequence - C.neoformans:1105 S.invicta:1105

Q5KNL1              	100.00%		E9IS15              	100.00%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for E9IS15 as seed ortholog is 100%.

Group of orthologs #21. Best score 1101 bits
Score difference with first non-orthologous sequence - C.neoformans:1101 S.invicta:1017

Q5KIQ1              	100.00%		E9IPI9              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for E9IPI9 as seed ortholog is 100%.

Group of orthologs #22. Best score 1086 bits
Score difference with first non-orthologous sequence - C.neoformans:1086 S.invicta:1086

Q5KM99              	100.00%		E9IG54              	100.00%
Bootstrap support for Q5KM99 as seed ortholog is 100%.
Bootstrap support for E9IG54 as seed ortholog is 100%.

Group of orthologs #23. Best score 1066 bits
Score difference with first non-orthologous sequence - C.neoformans:810 S.invicta:979

Q5KPM2              	100.00%		E9IRZ2              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for E9IRZ2 as seed ortholog is 100%.

Group of orthologs #24. Best score 1049 bits
Score difference with first non-orthologous sequence - C.neoformans:1049 S.invicta:1049

Q5KEG6              	100.00%		E9ILQ9              	100.00%
Bootstrap support for Q5KEG6 as seed ortholog is 100%.
Bootstrap support for E9ILQ9 as seed ortholog is 100%.

Group of orthologs #25. Best score 1025 bits
Score difference with first non-orthologous sequence - C.neoformans:757 S.invicta:1025

Q5KCR8              	100.00%		E9J0E8              	100.00%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for E9J0E8 as seed ortholog is 100%.

Group of orthologs #26. Best score 1025 bits
Score difference with first non-orthologous sequence - C.neoformans:1025 S.invicta:1025

Q5KKH8              	100.00%		E9IWJ9              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for E9IWJ9 as seed ortholog is 100%.

Group of orthologs #27. Best score 1000 bits
Score difference with first non-orthologous sequence - C.neoformans:1000 S.invicta:1000

Q5KGK1              	100.00%		E9ISN2              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for E9ISN2 as seed ortholog is 100%.

Group of orthologs #28. Best score 988 bits
Score difference with first non-orthologous sequence - C.neoformans:156 S.invicta:790

Q5KIK6              	100.00%		E9J7N3              	100.00%
Bootstrap support for Q5KIK6 as seed ortholog is 99%.
Bootstrap support for E9J7N3 as seed ortholog is 100%.

Group of orthologs #29. Best score 968 bits
Score difference with first non-orthologous sequence - C.neoformans:243 S.invicta:175

Q5KKM4              	100.00%		E9JCP6              	100.00%
Q5KKP4              	79.58%		
Bootstrap support for Q5KKM4 as seed ortholog is 100%.
Bootstrap support for E9JCP6 as seed ortholog is 100%.

Group of orthologs #30. Best score 952 bits
Score difference with first non-orthologous sequence - C.neoformans:952 S.invicta:952

Q5K754              	100.00%		E9ID92              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for E9ID92 as seed ortholog is 100%.

Group of orthologs #31. Best score 930 bits
Score difference with first non-orthologous sequence - C.neoformans:930 S.invicta:930

Q5KL19              	100.00%		E9IDT3              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for E9IDT3 as seed ortholog is 100%.

Group of orthologs #32. Best score 921 bits
Score difference with first non-orthologous sequence - C.neoformans:237 S.invicta:173

Q5KP96              	100.00%		E9IKW3              	100.00%
Bootstrap support for Q5KP96 as seed ortholog is 99%.
Bootstrap support for E9IKW3 as seed ortholog is 99%.

Group of orthologs #33. Best score 908 bits
Score difference with first non-orthologous sequence - C.neoformans:544 S.invicta:908

Q5KEV8              	100.00%		E9IAZ0              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for E9IAZ0 as seed ortholog is 100%.

Group of orthologs #34. Best score 902 bits
Score difference with first non-orthologous sequence - C.neoformans:902 S.invicta:263

Q5KMH0              	100.00%		E9J5Z1              	100.00%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for E9J5Z1 as seed ortholog is 99%.

Group of orthologs #35. Best score 879 bits
Score difference with first non-orthologous sequence - C.neoformans:744 S.invicta:879

Q5KGV5              	100.00%		E9IUV8              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for E9IUV8 as seed ortholog is 100%.

Group of orthologs #36. Best score 870 bits
Score difference with first non-orthologous sequence - C.neoformans:870 S.invicta:870

Q5KLE4              	100.00%		E9IDU2              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for E9IDU2 as seed ortholog is 100%.

Group of orthologs #37. Best score 862 bits
Score difference with first non-orthologous sequence - C.neoformans:862 S.invicta:384

Q5KF97              	100.00%		E9J833              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for E9J833 as seed ortholog is 100%.

Group of orthologs #38. Best score 840 bits
Score difference with first non-orthologous sequence - C.neoformans:840 S.invicta:840

Q5K7U0              	100.00%		E9IMU6              	100.00%
                    	       		E9ICG4              	77.64%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for E9IMU6 as seed ortholog is 100%.

Group of orthologs #39. Best score 837 bits
Score difference with first non-orthologous sequence - C.neoformans:211 S.invicta:552

Q5KEX1              	100.00%		E9IJS9              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 99%.
Bootstrap support for E9IJS9 as seed ortholog is 100%.

Group of orthologs #40. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:171 S.invicta:230

Q5K6Z6              	100.00%		E9J3P4              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 99%.
Bootstrap support for E9J3P4 as seed ortholog is 100%.

Group of orthologs #41. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:709 S.invicta:829

Q5KMF6              	100.00%		E9JBF4              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for E9JBF4 as seed ortholog is 100%.

Group of orthologs #42. Best score 828 bits
Score difference with first non-orthologous sequence - C.neoformans:828 S.invicta:828

Q5KN88              	100.00%		E9IUL5              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for E9IUL5 as seed ortholog is 100%.

Group of orthologs #43. Best score 814 bits
Score difference with first non-orthologous sequence - C.neoformans:814 S.invicta:814

Q5KKQ6              	100.00%		E9J9M6              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for E9J9M6 as seed ortholog is 100%.

Group of orthologs #44. Best score 811 bits
Score difference with first non-orthologous sequence - C.neoformans:486 S.invicta:811

Q5KDY4              	100.00%		E9J603              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for E9J603 as seed ortholog is 100%.

Group of orthologs #45. Best score 809 bits
Score difference with first non-orthologous sequence - C.neoformans:603 S.invicta:809

Q5KIH7              	100.00%		E9J3C0              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for E9J3C0 as seed ortholog is 100%.

Group of orthologs #46. Best score 806 bits
Score difference with first non-orthologous sequence - C.neoformans:806 S.invicta:806

P0CN82              	100.00%		E9J576              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for E9J576 as seed ortholog is 100%.

Group of orthologs #47. Best score 799 bits
Score difference with first non-orthologous sequence - C.neoformans:799 S.invicta:799

Q5KBP7              	100.00%		E9JCU0              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for E9JCU0 as seed ortholog is 100%.

Group of orthologs #48. Best score 798 bits
Score difference with first non-orthologous sequence - C.neoformans:530 S.invicta:723

Q5KH77              	100.00%		E9IWG9              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for E9IWG9 as seed ortholog is 100%.

Group of orthologs #49. Best score 797 bits
Score difference with first non-orthologous sequence - C.neoformans:797 S.invicta:797

Q5K9G4              	100.00%		E9J3Y8              	100.00%
Bootstrap support for Q5K9G4 as seed ortholog is 100%.
Bootstrap support for E9J3Y8 as seed ortholog is 100%.

Group of orthologs #50. Best score 760 bits
Score difference with first non-orthologous sequence - C.neoformans:210 S.invicta:423

Q5KKE7              	100.00%		E9IRR1              	100.00%
                    	       		E9IYR4              	55.77%
                    	       		E9IYR5              	50.64%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for E9IRR1 as seed ortholog is 100%.

Group of orthologs #51. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:759 S.invicta:438

P0CN32              	100.00%		E9JBK2              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for E9JBK2 as seed ortholog is 100%.

Group of orthologs #52. Best score 758 bits
Score difference with first non-orthologous sequence - C.neoformans:412 S.invicta:99

Q5KM62              	100.00%		E9JAT9              	100.00%
                    	       		E9IZM7              	89.82%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for E9JAT9 as seed ortholog is 99%.

Group of orthologs #53. Best score 755 bits
Score difference with first non-orthologous sequence - C.neoformans:755 S.invicta:755

P0CR38              	100.00%		E9IPJ2              	100.00%
Bootstrap support for P0CR38 as seed ortholog is 100%.
Bootstrap support for E9IPJ2 as seed ortholog is 100%.

Group of orthologs #54. Best score 735 bits
Score difference with first non-orthologous sequence - C.neoformans:735 S.invicta:424

P0CN30              	100.00%		E9ILN0              	100.00%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for E9ILN0 as seed ortholog is 100%.

Group of orthologs #55. Best score 734 bits
Score difference with first non-orthologous sequence - C.neoformans:734 S.invicta:734

Q5KDU2              	100.00%		E9IR94              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for E9IR94 as seed ortholog is 100%.

Group of orthologs #56. Best score 728 bits
Score difference with first non-orthologous sequence - C.neoformans:421 S.invicta:728

Q5KJI1              	100.00%		E9IXR9              	100.00%
                    	       		E9J217              	11.30%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for E9IXR9 as seed ortholog is 100%.

Group of orthologs #57. Best score 724 bits
Score difference with first non-orthologous sequence - C.neoformans:46 S.invicta:724

Q5K906              	100.00%		E9J8K4              	100.00%
Q5KDA3              	99.60%		
Bootstrap support for Q5K906 as seed ortholog is 85%.
Bootstrap support for E9J8K4 as seed ortholog is 100%.

Group of orthologs #58. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:609 S.invicta:722

Q5KFB9              	100.00%		E9J3G5              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for E9J3G5 as seed ortholog is 100%.

Group of orthologs #59. Best score 720 bits
Score difference with first non-orthologous sequence - C.neoformans:720 S.invicta:720

Q5KQ47              	100.00%		E9ICL7              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for E9ICL7 as seed ortholog is 100%.

Group of orthologs #60. Best score 713 bits
Score difference with first non-orthologous sequence - C.neoformans:713 S.invicta:713

Q5KLX6              	100.00%		E9ILL5              	100.00%
Bootstrap support for Q5KLX6 as seed ortholog is 100%.
Bootstrap support for E9ILL5 as seed ortholog is 100%.

Group of orthologs #61. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:284 S.invicta:583

Q5KP06              	100.00%		E9I8G6              	100.00%
                    	       		E9JCX2              	69.64%
                    	       		E9J2L3              	53.57%
                    	       		E9JCX3              	30.36%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for E9I8G6 as seed ortholog is 100%.

Group of orthologs #62. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:706 S.invicta:706

Q5KNG1              	100.00%		E9IG45              	100.00%
Bootstrap support for Q5KNG1 as seed ortholog is 100%.
Bootstrap support for E9IG45 as seed ortholog is 100%.

Group of orthologs #63. Best score 705 bits
Score difference with first non-orthologous sequence - C.neoformans:212 S.invicta:705

Q5KBF6              	100.00%		E9IN58              	100.00%
Bootstrap support for Q5KBF6 as seed ortholog is 100%.
Bootstrap support for E9IN58 as seed ortholog is 100%.

Group of orthologs #64. Best score 703 bits
Score difference with first non-orthologous sequence - C.neoformans:703 S.invicta:703

P0CO10              	100.00%		E9IV64              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for E9IV64 as seed ortholog is 100%.

Group of orthologs #65. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 S.invicta:700

Q5KPQ9              	100.00%		E9J9S7              	100.00%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for E9J9S7 as seed ortholog is 100%.

Group of orthologs #66. Best score 696 bits
Score difference with first non-orthologous sequence - C.neoformans:696 S.invicta:696

Q5K7B4              	100.00%		E9ILC2              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for E9ILC2 as seed ortholog is 100%.

Group of orthologs #67. Best score 696 bits
Score difference with first non-orthologous sequence - C.neoformans:696 S.invicta:696

Q5KML2              	100.00%		E9J1P4              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for E9J1P4 as seed ortholog is 100%.

Group of orthologs #68. Best score 695 bits
Score difference with first non-orthologous sequence - C.neoformans:695 S.invicta:695

Q5K9S3              	100.00%		E9J064              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for E9J064 as seed ortholog is 100%.

Group of orthologs #69. Best score 693 bits
Score difference with first non-orthologous sequence - C.neoformans:693 S.invicta:693

Q5KK44              	100.00%		E9ILW1              	100.00%
Q5KK43              	44.46%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for E9ILW1 as seed ortholog is 100%.

Group of orthologs #70. Best score 693 bits
Score difference with first non-orthologous sequence - C.neoformans:693 S.invicta:693

Q5KMU3              	100.00%		E9IKN3              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for E9IKN3 as seed ortholog is 100%.

Group of orthologs #71. Best score 691 bits
Score difference with first non-orthologous sequence - C.neoformans:691 S.invicta:691

Q5K9B2              	100.00%		E9J843              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for E9J843 as seed ortholog is 100%.

Group of orthologs #72. Best score 691 bits
Score difference with first non-orthologous sequence - C.neoformans:691 S.invicta:691

Q5KP40              	100.00%		E9J0V0              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for E9J0V0 as seed ortholog is 100%.

Group of orthologs #73. Best score 690 bits
Score difference with first non-orthologous sequence - C.neoformans:690 S.invicta:690

Q5KNE3              	100.00%		E9ILL7              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for E9ILL7 as seed ortholog is 100%.

Group of orthologs #74. Best score 687 bits
Score difference with first non-orthologous sequence - C.neoformans:687 S.invicta:687

Q5KPI3              	100.00%		E9IQ54              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for E9IQ54 as seed ortholog is 100%.

Group of orthologs #75. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 S.invicta:686

Q5KDD4              	100.00%		E9J0X9              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for E9J0X9 as seed ortholog is 100%.

Group of orthologs #76. Best score 681 bits
Score difference with first non-orthologous sequence - C.neoformans:159 S.invicta:45

Q5KJN9              	100.00%		E9IEN2              	100.00%
Bootstrap support for Q5KJN9 as seed ortholog is 98%.
Bootstrap support for E9IEN2 as seed ortholog is 77%.

Group of orthologs #77. Best score 669 bits
Score difference with first non-orthologous sequence - C.neoformans:669 S.invicta:669

Q5KGH2              	100.00%		E9IBU7              	100.00%
Bootstrap support for Q5KGH2 as seed ortholog is 100%.
Bootstrap support for E9IBU7 as seed ortholog is 100%.

Group of orthologs #78. Best score 669 bits
Score difference with first non-orthologous sequence - C.neoformans:669 S.invicta:669

Q5KG64              	100.00%		E9IF19              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for E9IF19 as seed ortholog is 100%.

Group of orthologs #79. Best score 668 bits
Score difference with first non-orthologous sequence - C.neoformans:668 S.invicta:668

Q5K9H1              	100.00%		E9IDA8              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for E9IDA8 as seed ortholog is 100%.

Group of orthologs #80. Best score 665 bits
Score difference with first non-orthologous sequence - C.neoformans:665 S.invicta:665

Q5KLI4              	100.00%		E9I9M1              	100.00%
Bootstrap support for Q5KLI4 as seed ortholog is 100%.
Bootstrap support for E9I9M1 as seed ortholog is 100%.

Group of orthologs #81. Best score 663 bits
Score difference with first non-orthologous sequence - C.neoformans:344 S.invicta:663

Q5KIF1              	100.00%		E9IQ16              	100.00%
                    	       		E9J5D4              	16.40%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for E9IQ16 as seed ortholog is 100%.

Group of orthologs #82. Best score 662 bits
Score difference with first non-orthologous sequence - C.neoformans:386 S.invicta:662

Q5KLP9              	100.00%		E9J2F5              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for E9J2F5 as seed ortholog is 100%.

Group of orthologs #83. Best score 661 bits
Score difference with first non-orthologous sequence - C.neoformans:661 S.invicta:661

Q5KE94              	100.00%		E9IGN8              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for E9IGN8 as seed ortholog is 100%.

Group of orthologs #84. Best score 661 bits
Score difference with first non-orthologous sequence - C.neoformans:661 S.invicta:77

Q5KBA0              	100.00%		E9IMV1              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for E9IMV1 as seed ortholog is 91%.

Group of orthologs #85. Best score 661 bits
Score difference with first non-orthologous sequence - C.neoformans:583 S.invicta:661

Q5KH73              	100.00%		E9IZL5              	100.00%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for E9IZL5 as seed ortholog is 100%.

Group of orthologs #86. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:361 S.invicta:659

Q5KLG5              	100.00%		E9I9N9              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for E9I9N9 as seed ortholog is 100%.

Group of orthologs #87. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:561 S.invicta:656

Q5KLI3              	100.00%		E9IU82              	100.00%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for E9IU82 as seed ortholog is 100%.

Group of orthologs #88. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:380 S.invicta:453

P0CQ72              	100.00%		E9IZK2              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for E9IZK2 as seed ortholog is 100%.

Group of orthologs #89. Best score 652 bits
Score difference with first non-orthologous sequence - C.neoformans:652 S.invicta:652

Q5KB97              	100.00%		E9IHC3              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for E9IHC3 as seed ortholog is 100%.

Group of orthologs #90. Best score 651 bits
Score difference with first non-orthologous sequence - C.neoformans:651 S.invicta:651

Q5KI64              	100.00%		E9IUH0              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for E9IUH0 as seed ortholog is 100%.

Group of orthologs #91. Best score 650 bits
Score difference with first non-orthologous sequence - C.neoformans:650 S.invicta:222

Q5KJ87              	100.00%		E9IBV6              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for E9IBV6 as seed ortholog is 100%.

Group of orthologs #92. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 S.invicta:646

Q5KFG6              	100.00%		E9ISN0              	100.00%
Bootstrap support for Q5KFG6 as seed ortholog is 100%.
Bootstrap support for E9ISN0 as seed ortholog is 100%.

Group of orthologs #93. Best score 643 bits
Score difference with first non-orthologous sequence - C.neoformans:643 S.invicta:643

Q5KBI1              	100.00%		E9J585              	100.00%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for E9J585 as seed ortholog is 100%.

Group of orthologs #94. Best score 643 bits
Score difference with first non-orthologous sequence - C.neoformans:643 S.invicta:643

Q5KLA1              	100.00%		E9J604              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for E9J604 as seed ortholog is 100%.

Group of orthologs #95. Best score 642 bits
Score difference with first non-orthologous sequence - C.neoformans:642 S.invicta:434

Q5KM37              	100.00%		E9IDA9              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for E9IDA9 as seed ortholog is 100%.

Group of orthologs #96. Best score 640 bits
Score difference with first non-orthologous sequence - C.neoformans:458 S.invicta:640

Q5KN74              	100.00%		E9J531              	100.00%
Bootstrap support for Q5KN74 as seed ortholog is 100%.
Bootstrap support for E9J531 as seed ortholog is 100%.

Group of orthologs #97. Best score 638 bits
Score difference with first non-orthologous sequence - C.neoformans:638 S.invicta:638

P0CL88              	100.00%		E9IBY6              	100.00%
Bootstrap support for P0CL88 as seed ortholog is 100%.
Bootstrap support for E9IBY6 as seed ortholog is 100%.

Group of orthologs #98. Best score 638 bits
Score difference with first non-orthologous sequence - C.neoformans:294 S.invicta:468

Q5KDL3              	100.00%		E9IEV2              	100.00%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for E9IEV2 as seed ortholog is 100%.

Group of orthologs #99. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:636 S.invicta:636

Q5KI75              	100.00%		E9JAB4              	100.00%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for E9JAB4 as seed ortholog is 100%.

Group of orthologs #100. Best score 635 bits
Score difference with first non-orthologous sequence - C.neoformans:635 S.invicta:571

Q5K7B5              	100.00%		E9J743              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for E9J743 as seed ortholog is 100%.

Group of orthologs #101. Best score 633 bits
Score difference with first non-orthologous sequence - C.neoformans:329 S.invicta:633

Q5KFJ3              	100.00%		E9IKD1              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for E9IKD1 as seed ortholog is 100%.

Group of orthologs #102. Best score 627 bits
Score difference with first non-orthologous sequence - C.neoformans:561 S.invicta:627

P0CM96              	100.00%		E9IKV2              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for E9IKV2 as seed ortholog is 100%.

Group of orthologs #103. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:515 S.invicta:626

Q5KBB1              	100.00%		E9ISA6              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for E9ISA6 as seed ortholog is 100%.

Group of orthologs #104. Best score 625 bits
Score difference with first non-orthologous sequence - C.neoformans:163 S.invicta:158

Q5K7R6              	100.00%		E9IFE2              	100.00%
Bootstrap support for Q5K7R6 as seed ortholog is 99%.
Bootstrap support for E9IFE2 as seed ortholog is 99%.

Group of orthologs #105. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:624 S.invicta:624

Q5KEF7              	100.00%		E9IW16              	100.00%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for E9IW16 as seed ortholog is 100%.

Group of orthologs #106. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:624 S.invicta:624

Q5KJT2              	100.00%		E9J3K0              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for E9J3K0 as seed ortholog is 100%.

Group of orthologs #107. Best score 621 bits
Score difference with first non-orthologous sequence - C.neoformans:252 S.invicta:621

Q5KB11              	100.00%		E9IA98              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 99%.
Bootstrap support for E9IA98 as seed ortholog is 100%.

Group of orthologs #108. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:620 S.invicta:620

Q5KKR7              	100.00%		E9IFD4              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for E9IFD4 as seed ortholog is 100%.

Group of orthologs #109. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:617 S.invicta:481

Q5KGS9              	100.00%		E9J1S5              	100.00%
                    	       		E9J040              	17.31%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for E9J1S5 as seed ortholog is 100%.

Group of orthologs #110. Best score 616 bits
Score difference with first non-orthologous sequence - C.neoformans:616 S.invicta:616

Q5KLW7              	100.00%		E9J0F3              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for E9J0F3 as seed ortholog is 100%.

Group of orthologs #111. Best score 615 bits
Score difference with first non-orthologous sequence - C.neoformans:72 S.invicta:615

Q5KKV8              	100.00%		E9IY57              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 90%.
Bootstrap support for E9IY57 as seed ortholog is 100%.

Group of orthologs #112. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:613 S.invicta:613

Q5KDW0              	100.00%		E9J5F4              	100.00%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for E9J5F4 as seed ortholog is 100%.

Group of orthologs #113. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:329 S.invicta:356

Q5KE58              	100.00%		E9J702              	100.00%
Bootstrap support for Q5KE58 as seed ortholog is 100%.
Bootstrap support for E9J702 as seed ortholog is 100%.

Group of orthologs #114. Best score 612 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:355

Q5KKP2              	100.00%		E9IBM0              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 99%.
Bootstrap support for E9IBM0 as seed ortholog is 100%.

Group of orthologs #115. Best score 611 bits
Score difference with first non-orthologous sequence - C.neoformans:331 S.invicta:611

Q5K7N5              	100.00%		E9IUU4              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for E9IUU4 as seed ortholog is 100%.

Group of orthologs #116. Best score 608 bits
Score difference with first non-orthologous sequence - C.neoformans:608 S.invicta:608

P0CR28              	100.00%		E9IXY8              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for E9IXY8 as seed ortholog is 100%.

Group of orthologs #117. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:311 S.invicta:391

P0CQ70              	100.00%		E9IEB5              	100.00%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for E9IEB5 as seed ortholog is 100%.

Group of orthologs #118. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 S.invicta:601

Q5KB99              	100.00%		E9ICW3              	100.00%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for E9ICW3 as seed ortholog is 100%.

Group of orthologs #119. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 S.invicta:601

Q5KCZ2              	100.00%		E9IFP1              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for E9IFP1 as seed ortholog is 100%.

Group of orthologs #120. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:337 S.invicta:186

Q5KAU0              	100.00%		E9IX10              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 100%.
Bootstrap support for E9IX10 as seed ortholog is 99%.

Group of orthologs #121. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:597 S.invicta:597

P0CQ22              	100.00%		E9IMH2              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for E9IMH2 as seed ortholog is 100%.

Group of orthologs #122. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:596 S.invicta:596

P0CR26              	100.00%		E9IDT2              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for E9IDT2 as seed ortholog is 100%.

Group of orthologs #123. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:286 S.invicta:393

P0CQ84              	100.00%		E9IJQ2              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for E9IJQ2 as seed ortholog is 100%.

Group of orthologs #124. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:596 S.invicta:596

Q5KEV3              	100.00%		E9IV41              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for E9IV41 as seed ortholog is 100%.

Group of orthologs #125. Best score 595 bits
Score difference with first non-orthologous sequence - C.neoformans:595 S.invicta:595

Q5KD08              	100.00%		E9IPM8              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for E9IPM8 as seed ortholog is 100%.

Group of orthologs #126. Best score 595 bits
Score difference with first non-orthologous sequence - C.neoformans:595 S.invicta:595

Q5KMN3              	100.00%		E9ILR8              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for E9ILR8 as seed ortholog is 100%.

Group of orthologs #127. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:592 S.invicta:592

Q5KIN6              	100.00%		E9JC15              	100.00%
                    	       		E9IIE3              	19.64%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for E9JC15 as seed ortholog is 100%.

Group of orthologs #128. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:592 S.invicta:592

Q5KC69              	100.00%		E9IDS7              	100.00%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for E9IDS7 as seed ortholog is 100%.

Group of orthologs #129. Best score 591 bits
Score difference with first non-orthologous sequence - C.neoformans:591 S.invicta:591

Q5KQ62              	100.00%		E9IW59              	100.00%
Bootstrap support for Q5KQ62 as seed ortholog is 100%.
Bootstrap support for E9IW59 as seed ortholog is 100%.

Group of orthologs #130. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:514 S.invicta:154

Q5KHZ4              	100.00%		E9IK25              	100.00%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for E9IK25 as seed ortholog is 99%.

Group of orthologs #131. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:587 S.invicta:587

Q5K7K5              	100.00%		E9J0Q7              	100.00%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for E9J0Q7 as seed ortholog is 100%.

Group of orthologs #132. Best score 584 bits
Score difference with first non-orthologous sequence - C.neoformans:584 S.invicta:584

Q5KIH6              	100.00%		E9IJN7              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for E9IJN7 as seed ortholog is 100%.

Group of orthologs #133. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 S.invicta:582

Q5KP26              	100.00%		E9I8U4              	100.00%
Bootstrap support for Q5KP26 as seed ortholog is 100%.
Bootstrap support for E9I8U4 as seed ortholog is 100%.

Group of orthologs #134. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 S.invicta:323

Q5KIA2              	100.00%		E9IME8              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for E9IME8 as seed ortholog is 100%.

Group of orthologs #135. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:198 S.invicta:415

Q5KLV5              	100.00%		E9IK02              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for E9IK02 as seed ortholog is 100%.

Group of orthologs #136. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 S.invicta:579

Q5KCZ4              	100.00%		E9J0H9              	100.00%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for E9J0H9 as seed ortholog is 100%.

Group of orthologs #137. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 S.invicta:574

Q5KP44              	100.00%		E9J6Z2              	100.00%
                    	       		E9J067              	44.81%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for E9J6Z2 as seed ortholog is 100%.

Group of orthologs #138. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:243 S.invicta:419

Q5K7R3              	100.00%		E9IJK1              	100.00%
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for E9IJK1 as seed ortholog is 100%.

Group of orthologs #139. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 S.invicta:574

P0CO94              	100.00%		E9J1K8              	100.00%
Bootstrap support for P0CO94 as seed ortholog is 100%.
Bootstrap support for E9J1K8 as seed ortholog is 100%.

Group of orthologs #140. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 S.invicta:572

Q5KDF5              	100.00%		E9IUA0              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for E9IUA0 as seed ortholog is 100%.

Group of orthologs #141. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 S.invicta:572

Q5KKT5              	100.00%		E9IZL2              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for E9IZL2 as seed ortholog is 100%.

Group of orthologs #142. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:571 S.invicta:571

Q5KBV2              	100.00%		E9I8G5              	100.00%
Bootstrap support for Q5KBV2 as seed ortholog is 100%.
Bootstrap support for E9I8G5 as seed ortholog is 100%.

Group of orthologs #143. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:148 S.invicta:571

Q5KME1              	100.00%		E9IB51              	100.00%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for E9IB51 as seed ortholog is 100%.

Group of orthologs #144. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:571 S.invicta:571

Q5KMJ4              	100.00%		E9JAG6              	100.00%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for E9JAG6 as seed ortholog is 100%.

Group of orthologs #145. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:336 S.invicta:389

P0CQ96              	100.00%		E9IXM7              	100.00%
Bootstrap support for P0CQ96 as seed ortholog is 100%.
Bootstrap support for E9IXM7 as seed ortholog is 100%.

Group of orthologs #146. Best score 568 bits
Score difference with first non-orthologous sequence - C.neoformans:568 S.invicta:568

Q5KFS5              	100.00%		E9IRQ3              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for E9IRQ3 as seed ortholog is 100%.

Group of orthologs #147. Best score 568 bits
Score difference with first non-orthologous sequence - C.neoformans:568 S.invicta:568

Q5KDR3              	100.00%		E9J7N7              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for E9J7N7 as seed ortholog is 100%.

Group of orthologs #148. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:282 S.invicta:170

P0CQ98              	100.00%		E9IIN8              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 99%.
Bootstrap support for E9IIN8 as seed ortholog is 99%.

Group of orthologs #149. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 S.invicta:564

Q5KKE9              	100.00%		E9J671              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for E9J671 as seed ortholog is 100%.

Group of orthologs #150. Best score 563 bits
Score difference with first non-orthologous sequence - C.neoformans:291 S.invicta:189

P0CQ76              	100.00%		E9J4I7              	100.00%
Bootstrap support for P0CQ76 as seed ortholog is 100%.
Bootstrap support for E9J4I7 as seed ortholog is 100%.

Group of orthologs #151. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:138 S.invicta:562

Q5KGH3              	100.00%		E9IAY8              	100.00%
Bootstrap support for Q5KGH3 as seed ortholog is 100%.
Bootstrap support for E9IAY8 as seed ortholog is 100%.

Group of orthologs #152. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:458 S.invicta:562

Q5KIZ9              	100.00%		E9IJT9              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for E9IJT9 as seed ortholog is 100%.

Group of orthologs #153. Best score 559 bits
Score difference with first non-orthologous sequence - C.neoformans:559 S.invicta:559

Q5KMG4              	100.00%		E9IB56              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for E9IB56 as seed ortholog is 100%.

Group of orthologs #154. Best score 559 bits
Score difference with first non-orthologous sequence - C.neoformans:559 S.invicta:559

Q5KBL4              	100.00%		E9IUF9              	100.00%
Bootstrap support for Q5KBL4 as seed ortholog is 100%.
Bootstrap support for E9IUF9 as seed ortholog is 100%.

Group of orthologs #155. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 S.invicta:558

Q5KEN6              	100.00%		E9J4Q6              	100.00%
                    	       		E9IJ24              	33.20%
                    	       		E9IRN6              	25.27%
Bootstrap support for Q5KEN6 as seed ortholog is 100%.
Bootstrap support for E9J4Q6 as seed ortholog is 100%.

Group of orthologs #156. Best score 555 bits
Score difference with first non-orthologous sequence - C.neoformans:555 S.invicta:555

Q5K8D2              	100.00%		E9JD47              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for E9JD47 as seed ortholog is 100%.

Group of orthologs #157. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 S.invicta:549

Q5KII0              	100.00%		E9JD17              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for E9JD17 as seed ortholog is 100%.

Group of orthologs #158. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 S.invicta:545

Q5KL42              	100.00%		E9I962              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for E9I962 as seed ortholog is 100%.

Group of orthologs #159. Best score 544 bits
Score difference with first non-orthologous sequence - C.neoformans:544 S.invicta:22

Q5KC94              	100.00%		E9IQA5              	100.00%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for E9IQA5 as seed ortholog is 77%.

Group of orthologs #160. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:501 S.invicta:542

Q5KLT9              	100.00%		E9IGT7              	100.00%
Bootstrap support for Q5KLT9 as seed ortholog is 100%.
Bootstrap support for E9IGT7 as seed ortholog is 100%.

Group of orthologs #161. Best score 540 bits
Score difference with first non-orthologous sequence - C.neoformans:276 S.invicta:123

P0CQ74              	100.00%		E9IP05              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for E9IP05 as seed ortholog is 99%.

Group of orthologs #162. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:539 S.invicta:539

Q5KHN7              	100.00%		E9IVN8              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for E9IVN8 as seed ortholog is 100%.

Group of orthologs #163. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:534 S.invicta:534

P0CM88              	100.00%		E9J3A8              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for E9J3A8 as seed ortholog is 100%.

Group of orthologs #164. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 S.invicta:529

Q5KKU4              	100.00%		E9IIM6              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for E9IIM6 as seed ortholog is 100%.

Group of orthologs #165. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:524 S.invicta:524

Q5KKA5              	100.00%		E9J656              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for E9J656 as seed ortholog is 100%.

Group of orthologs #166. Best score 523 bits
Score difference with first non-orthologous sequence - C.neoformans:523 S.invicta:523

Q5K899              	100.00%		E9IGD4              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for E9IGD4 as seed ortholog is 100%.

Group of orthologs #167. Best score 522 bits
Score difference with first non-orthologous sequence - C.neoformans:394 S.invicta:153

Q5K745              	100.00%		E9IJF0              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for E9IJF0 as seed ortholog is 99%.

Group of orthologs #168. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:290 S.invicta:516

Q5KHV9              	100.00%		E9IAD3              	100.00%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for E9IAD3 as seed ortholog is 100%.

Group of orthologs #169. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:266 S.invicta:146

Q5KJ82              	100.00%		E9I9F3              	100.00%
Bootstrap support for Q5KJ82 as seed ortholog is 100%.
Bootstrap support for E9I9F3 as seed ortholog is 99%.

Group of orthologs #170. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 S.invicta:514

Q5KKB4              	100.00%		E9IM02              	100.00%
Bootstrap support for Q5KKB4 as seed ortholog is 100%.
Bootstrap support for E9IM02 as seed ortholog is 100%.

Group of orthologs #171. Best score 513 bits
Score difference with first non-orthologous sequence - C.neoformans:513 S.invicta:513

Q5KE01              	100.00%		E9IUG2              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for E9IUG2 as seed ortholog is 100%.

Group of orthologs #172. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:61 S.invicta:82

Q5KEX3              	100.00%		E9IRW6              	100.00%
                    	       		E9IF70              	9.98%
Bootstrap support for Q5KEX3 as seed ortholog is 93%.
Bootstrap support for E9IRW6 as seed ortholog is 97%.

Group of orthologs #173. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 S.invicta:512

P0CP00              	100.00%		E9IBH9              	100.00%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for E9IBH9 as seed ortholog is 100%.

Group of orthologs #174. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 S.invicta:509

Q5KLU5              	100.00%		E9J891              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for E9J891 as seed ortholog is 100%.

Group of orthologs #175. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 S.invicta:508

Q5KKG6              	100.00%		E9J2S7              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for E9J2S7 as seed ortholog is 100%.

Group of orthologs #176. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:421 S.invicta:458

Q5KII4              	100.00%		E9IED0              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for E9IED0 as seed ortholog is 100%.

Group of orthologs #177. Best score 506 bits
Score difference with first non-orthologous sequence - C.neoformans:348 S.invicta:330

Q5KBN2              	100.00%		E9IEU0              	100.00%
Q5KIR5              	17.44%		
Bootstrap support for Q5KBN2 as seed ortholog is 100%.
Bootstrap support for E9IEU0 as seed ortholog is 100%.

Group of orthologs #178. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:293 S.invicta:498

Q5KQ22              	100.00%		E9JCW8              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for E9JCW8 as seed ortholog is 100%.

Group of orthologs #179. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:368 S.invicta:496

Q5K8L8              	100.00%		E9IQD8              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for E9IQD8 as seed ortholog is 100%.

Group of orthologs #180. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 S.invicta:493

Q5KAU9              	100.00%		E9IAV6              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for E9IAV6 as seed ortholog is 100%.

Group of orthologs #181. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 S.invicta:309

Q5KKP9              	100.00%		E9IGS7              	100.00%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for E9IGS7 as seed ortholog is 99%.

Group of orthologs #182. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:142 S.invicta:491

Q5KHJ1              	100.00%		E9ICF4              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 99%.
Bootstrap support for E9ICF4 as seed ortholog is 100%.

Group of orthologs #183. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:156

Q5KFJ4              	100.00%		E9IBT7              	100.00%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for E9IBT7 as seed ortholog is 99%.

Group of orthologs #184. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:256 S.invicta:175

Q5K7X5              	100.00%		E9IDD8              	100.00%
Q5K826              	31.19%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for E9IDD8 as seed ortholog is 100%.

Group of orthologs #185. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:487 S.invicta:487

Q5K757              	100.00%		E9IQA9              	100.00%
Bootstrap support for Q5K757 as seed ortholog is 100%.
Bootstrap support for E9IQA9 as seed ortholog is 100%.

Group of orthologs #186. Best score 486 bits
Score difference with first non-orthologous sequence - C.neoformans:213 S.invicta:137

P0CR00              	100.00%		E9IMP0              	100.00%
Bootstrap support for P0CR00 as seed ortholog is 100%.
Bootstrap support for E9IMP0 as seed ortholog is 99%.

Group of orthologs #187. Best score 486 bits
Score difference with first non-orthologous sequence - C.neoformans:486 S.invicta:486

Q5KPT1              	100.00%		E9IN77              	100.00%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for E9IN77 as seed ortholog is 100%.

Group of orthologs #188. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:485 S.invicta:485

P0CR52              	100.00%		E9J2N4              	100.00%
                    	       		E9J6D0              	16.09%
Bootstrap support for P0CR52 as seed ortholog is 100%.
Bootstrap support for E9J2N4 as seed ortholog is 100%.

Group of orthologs #189. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:485 S.invicta:485

P0CS78              	100.00%		E9IMG1              	100.00%
Bootstrap support for P0CS78 as seed ortholog is 100%.
Bootstrap support for E9IMG1 as seed ortholog is 100%.

Group of orthologs #190. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 S.invicta:403

P0CS36              	100.00%		E9J5Q1              	100.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for E9J5Q1 as seed ortholog is 100%.

Group of orthologs #191. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:315 S.invicta:332

Q5KMR8              	100.00%		E9I8X0              	100.00%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for E9I8X0 as seed ortholog is 100%.

Group of orthologs #192. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:389 S.invicta:482

Q5KHQ8              	100.00%		E9J5F8              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for E9J5F8 as seed ortholog is 100%.

Group of orthologs #193. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 S.invicta:480

Q5KAU8              	100.00%		E9IPM9              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for E9IPM9 as seed ortholog is 100%.

Group of orthologs #194. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:11 S.invicta:101

Q5KCS8              	100.00%		E9IVN9              	100.00%
Bootstrap support for Q5KCS8 as seed ortholog is 65%.
Alternative seed ortholog is Q5KF65 (11 bits away from this cluster)
Bootstrap support for E9IVN9 as seed ortholog is 99%.

Group of orthologs #195. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:479 S.invicta:479

Q5KK90              	100.00%		E9JD23              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for E9JD23 as seed ortholog is 100%.

Group of orthologs #196. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 S.invicta:213

Q5KII9              	100.00%		E9I8E6              	100.00%
                    	       		E9IZA0              	16.16%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for E9I8E6 as seed ortholog is 100%.

Group of orthologs #197. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 S.invicta:476

P0CQ08              	100.00%		E9ITJ0              	100.00%
Bootstrap support for P0CQ08 as seed ortholog is 100%.
Bootstrap support for E9ITJ0 as seed ortholog is 100%.

Group of orthologs #198. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:215 S.invicta:386

Q5KB93              	100.00%		E9J4P6              	100.00%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for E9J4P6 as seed ortholog is 100%.

Group of orthologs #199. Best score 474 bits
Score difference with first non-orthologous sequence - C.neoformans:301 S.invicta:202

Q5KLJ0              	100.00%		E9IBS7              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for E9IBS7 as seed ortholog is 99%.

Group of orthologs #200. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:340 S.invicta:225

Q5KC30              	100.00%		E9JBA1              	100.00%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for E9JBA1 as seed ortholog is 100%.

Group of orthologs #201. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:187 S.invicta:471

Q5KDJ3              	100.00%		E9IVM5              	100.00%
Bootstrap support for Q5KDJ3 as seed ortholog is 99%.
Bootstrap support for E9IVM5 as seed ortholog is 100%.

Group of orthologs #202. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:471 S.invicta:471

Q5KH88              	100.00%		E9J4J5              	100.00%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for E9J4J5 as seed ortholog is 100%.

Group of orthologs #203. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 S.invicta:470

Q5KNM9              	100.00%		E9J5D8              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for E9J5D8 as seed ortholog is 100%.

Group of orthologs #204. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:333 S.invicta:243

Q5KE89              	100.00%		E9IYU5              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 100%.
Bootstrap support for E9IYU5 as seed ortholog is 100%.

Group of orthologs #205. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:108 S.invicta:468

Q5KKJ5              	100.00%		E9I8B0              	100.00%
Bootstrap support for Q5KKJ5 as seed ortholog is 99%.
Bootstrap support for E9I8B0 as seed ortholog is 100%.

Group of orthologs #206. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:464 S.invicta:104

Q5KKE3              	100.00%		E9IN60              	100.00%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for E9IN60 as seed ortholog is 98%.

Group of orthologs #207. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:463 S.invicta:463

Q5K8F7              	100.00%		E9IRV4              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for E9IRV4 as seed ortholog is 100%.

Group of orthologs #208. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:463 S.invicta:463

Q5KDP3              	100.00%		E9IPU8              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for E9IPU8 as seed ortholog is 100%.

Group of orthologs #209. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 S.invicta:462

Q5KJI8              	100.00%		E9J8K2              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for E9J8K2 as seed ortholog is 100%.

Group of orthologs #210. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 S.invicta:460

Q5KAB8              	100.00%		E9I8G4              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for E9I8G4 as seed ortholog is 100%.

Group of orthologs #211. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 S.invicta:210

Q5KLM1              	100.00%		E9I9K4              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 100%.
Bootstrap support for E9I9K4 as seed ortholog is 99%.

Group of orthologs #212. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:230 S.invicta:148

Q5KMR6              	100.00%		E9IEF5              	100.00%
Bootstrap support for Q5KMR6 as seed ortholog is 100%.
Bootstrap support for E9IEF5 as seed ortholog is 99%.

Group of orthologs #213. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:158 S.invicta:456

Q5K9A0              	100.00%		E9I9G8              	100.00%
Bootstrap support for Q5K9A0 as seed ortholog is 99%.
Bootstrap support for E9I9G8 as seed ortholog is 100%.

Group of orthologs #214. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:226 S.invicta:226

P0CQ92              	100.00%		E9INF8              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for E9INF8 as seed ortholog is 100%.

Group of orthologs #215. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:399 S.invicta:87

Q5KI86              	100.00%		E9IQ30              	100.00%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for E9IQ30 as seed ortholog is 99%.

Group of orthologs #216. Best score 455 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:359

Q5KI40              	100.00%		E9ICA5              	100.00%
Bootstrap support for Q5KI40 as seed ortholog is 99%.
Bootstrap support for E9ICA5 as seed ortholog is 100%.

Group of orthologs #217. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:170

Q5KLG6              	100.00%		E9IG17              	100.00%
Bootstrap support for Q5KLG6 as seed ortholog is 91%.
Bootstrap support for E9IG17 as seed ortholog is 99%.

Group of orthologs #218. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 S.invicta:452

Q5KQ06              	100.00%		E9J3C1              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for E9J3C1 as seed ortholog is 100%.

Group of orthologs #219. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 S.invicta:264

Q5KQ45              	100.00%		E9JAN5              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for E9JAN5 as seed ortholog is 100%.

Group of orthologs #220. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:341 S.invicta:354

P0CS48              	100.00%		E9ILL8              	100.00%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for E9ILL8 as seed ortholog is 100%.

Group of orthologs #221. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:450 S.invicta:450

Q5KI46              	100.00%		E9IDG4              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for E9IDG4 as seed ortholog is 100%.

Group of orthologs #222. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:450 S.invicta:141

Q5KDB7              	100.00%		E9IWJ4              	100.00%
Bootstrap support for Q5KDB7 as seed ortholog is 100%.
Bootstrap support for E9IWJ4 as seed ortholog is 99%.

Group of orthologs #223. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:450 S.invicta:450

Q5KAX5              	100.00%		E9J6J8              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for E9J6J8 as seed ortholog is 100%.

Group of orthologs #224. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:449 S.invicta:347

Q5KF83              	100.00%		E9IBI0              	100.00%
Bootstrap support for Q5KF83 as seed ortholog is 100%.
Bootstrap support for E9IBI0 as seed ortholog is 100%.

Group of orthologs #225. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:447 S.invicta:447

Q5KBH1              	100.00%		E9J123              	100.00%
Bootstrap support for Q5KBH1 as seed ortholog is 100%.
Bootstrap support for E9J123 as seed ortholog is 100%.

Group of orthologs #226. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:445 S.invicta:355

Q5KF96              	100.00%		E9IFD5              	100.00%
Bootstrap support for Q5KF96 as seed ortholog is 100%.
Bootstrap support for E9IFD5 as seed ortholog is 100%.

Group of orthologs #227. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:177 S.invicta:150

Q5KIV9              	100.00%		E9J0Z2              	100.00%
Q5KBZ0              	10.19%		
Bootstrap support for Q5KIV9 as seed ortholog is 99%.
Bootstrap support for E9J0Z2 as seed ortholog is 99%.

Group of orthologs #228. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:372 S.invicta:313

Q5KCJ8              	100.00%		E9IG50              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for E9IG50 as seed ortholog is 100%.

Group of orthologs #229. Best score 442 bits
Score difference with first non-orthologous sequence - C.neoformans:442 S.invicta:442

P0CQ34              	100.00%		E9I9P3              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for E9I9P3 as seed ortholog is 100%.

Group of orthologs #230. Best score 442 bits
Score difference with first non-orthologous sequence - C.neoformans:313 S.invicta:339

Q5KHS6              	100.00%		E9ILD0              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 100%.
Bootstrap support for E9ILD0 as seed ortholog is 100%.

Group of orthologs #231. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 S.invicta:441

Q5KKS9              	100.00%		E9ID19              	100.00%
Bootstrap support for Q5KKS9 as seed ortholog is 100%.
Bootstrap support for E9ID19 as seed ortholog is 100%.

Group of orthologs #232. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 S.invicta:111

Q5KLK8              	100.00%		E9IXM2              	100.00%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for E9IXM2 as seed ortholog is 90%.

Group of orthologs #233. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:315 S.invicta:438

Q5KH38              	100.00%		E9J0W5              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for E9J0W5 as seed ortholog is 100%.

Group of orthologs #234. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 S.invicta:438

Q5K9L0              	100.00%		E9JD41              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for E9JD41 as seed ortholog is 100%.

Group of orthologs #235. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:9 S.invicta:111

Q5KFY6              	100.00%		E9IKC7              	100.00%
Bootstrap support for Q5KFY6 as seed ortholog is 100%.
Bootstrap support for E9IKC7 as seed ortholog is 99%.

Group of orthologs #236. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 S.invicta:435

Q5KFJ7              	100.00%		E9ISZ5              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for E9ISZ5 as seed ortholog is 100%.

Group of orthologs #237. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:434 S.invicta:434

P0CN48              	100.00%		E9IXS1              	100.00%
Bootstrap support for P0CN48 as seed ortholog is 100%.
Bootstrap support for E9IXS1 as seed ortholog is 100%.

Group of orthologs #238. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 S.invicta:433

Q5KPL5              	100.00%		E9I9L9              	100.00%
Bootstrap support for Q5KPL5 as seed ortholog is 100%.
Bootstrap support for E9I9L9 as seed ortholog is 100%.

Group of orthologs #239. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 S.invicta:433

Q5KK89              	100.00%		E9IDW4              	100.00%
Bootstrap support for Q5KK89 as seed ortholog is 100%.
Bootstrap support for E9IDW4 as seed ortholog is 100%.

Group of orthologs #240. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:300 S.invicta:433

Q5KKM6              	100.00%		E9IE29              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for E9IE29 as seed ortholog is 100%.

Group of orthologs #241. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:233 S.invicta:135

Q5KMG1              	100.00%		E9J300              	100.00%
Q5K8R8              	18.75%		
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for E9J300 as seed ortholog is 99%.

Group of orthologs #242. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 S.invicta:431

Q5K9A9              	100.00%		E9ILG5              	100.00%
Bootstrap support for Q5K9A9 as seed ortholog is 100%.
Bootstrap support for E9ILG5 as seed ortholog is 100%.

Group of orthologs #243. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 S.invicta:431

Q5KKK6              	100.00%		E9IFM1              	100.00%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for E9IFM1 as seed ortholog is 100%.

Group of orthologs #244. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:90 S.invicta:79

Q5K960              	100.00%		E9IW37              	100.00%
Bootstrap support for Q5K960 as seed ortholog is 95%.
Bootstrap support for E9IW37 as seed ortholog is 93%.

Group of orthologs #245. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 S.invicta:431

Q5KMF5              	100.00%		E9IW97              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for E9IW97 as seed ortholog is 100%.

Group of orthologs #246. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:274 S.invicta:430

Q5K8I1              	100.00%		E9J7R1              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for E9J7R1 as seed ortholog is 100%.

Group of orthologs #247. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 S.invicta:428

Q5KER6              	100.00%		E9IVN3              	100.00%
Bootstrap support for Q5KER6 as seed ortholog is 100%.
Bootstrap support for E9IVN3 as seed ortholog is 100%.

Group of orthologs #248. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 S.invicta:427

Q5KH62              	100.00%		E9J850              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for E9J850 as seed ortholog is 100%.

Group of orthologs #249. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:227 S.invicta:159

Q5KP35              	100.00%		E9J5Z0              	100.00%
Bootstrap support for Q5KP35 as seed ortholog is 100%.
Bootstrap support for E9J5Z0 as seed ortholog is 99%.

Group of orthologs #250. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:427

Q5KNC3              	100.00%		E9JB81              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 99%.
Bootstrap support for E9JB81 as seed ortholog is 100%.

Group of orthologs #251. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 S.invicta:352

Q5KBU1              	100.00%		E9ILU2              	100.00%
Bootstrap support for Q5KBU1 as seed ortholog is 100%.
Bootstrap support for E9ILU2 as seed ortholog is 100%.

Group of orthologs #252. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:18 S.invicta:424

Q5KK83              	100.00%		E9IUQ4              	100.00%
Bootstrap support for Q5KK83 as seed ortholog is 56%.
Alternative seed ortholog is Q5KII1 (18 bits away from this cluster)
Bootstrap support for E9IUQ4 as seed ortholog is 100%.

Group of orthologs #253. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:235 S.invicta:157

Q5KP10              	100.00%		E9IDB6              	100.00%
Bootstrap support for Q5KP10 as seed ortholog is 100%.
Bootstrap support for E9IDB6 as seed ortholog is 99%.

Group of orthologs #254. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:352 S.invicta:422

Q5KED7              	100.00%		E9I894              	100.00%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for E9I894 as seed ortholog is 100%.

Group of orthologs #255. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 S.invicta:421

P0CR56              	100.00%		E9IMI9              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for E9IMI9 as seed ortholog is 100%.

Group of orthologs #256. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:230 S.invicta:229

P0CR06              	100.00%		E9J1K7              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 100%.
Bootstrap support for E9J1K7 as seed ortholog is 99%.

Group of orthologs #257. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 S.invicta:418

Q5KJ46              	100.00%		E9IB02              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for E9IB02 as seed ortholog is 100%.

Group of orthologs #258. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 S.invicta:418

Q5K749              	100.00%		E9JDB3              	100.00%
Bootstrap support for Q5K749 as seed ortholog is 100%.
Bootstrap support for E9JDB3 as seed ortholog is 100%.

Group of orthologs #259. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 S.invicta:356

Q5KLS1              	100.00%		E9IF10              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for E9IF10 as seed ortholog is 100%.

Group of orthologs #260. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 S.invicta:416

Q5KKG9              	100.00%		E9JC37              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for E9JC37 as seed ortholog is 100%.

Group of orthologs #261. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 S.invicta:415

Q5K6V0              	100.00%		E9IQB9              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for E9IQB9 as seed ortholog is 100%.

Group of orthologs #262. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 S.invicta:414

Q5KDT3              	100.00%		E9IVN5              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for E9IVN5 as seed ortholog is 100%.

Group of orthologs #263. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:322 S.invicta:413

Q5KML3              	100.00%		E9IRW2              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for E9IRW2 as seed ortholog is 100%.

Group of orthologs #264. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 S.invicta:413

Q5K9N8              	100.00%		E9JCX0              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for E9JCX0 as seed ortholog is 100%.

Group of orthologs #265. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:181 S.invicta:268

Q5KDX5              	100.00%		E9IME3              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for E9IME3 as seed ortholog is 100%.

Group of orthologs #266. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:265 S.invicta:248

Q5KNA9              	100.00%		E9ILC6              	100.00%
Bootstrap support for Q5KNA9 as seed ortholog is 100%.
Bootstrap support for E9ILC6 as seed ortholog is 100%.

Group of orthologs #267. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 S.invicta:410

Q5KIS9              	100.00%		E9IYL3              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for E9IYL3 as seed ortholog is 100%.

Group of orthologs #268. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:409 S.invicta:409

Q5K972              	100.00%		E9IK76              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for E9IK76 as seed ortholog is 100%.

Group of orthologs #269. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 S.invicta:236

Q5KIY3              	100.00%		E9II51              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for E9II51 as seed ortholog is 99%.

Group of orthologs #270. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 S.invicta:408

Q5KHN9              	100.00%		E9J4Y7              	100.00%
Bootstrap support for Q5KHN9 as seed ortholog is 100%.
Bootstrap support for E9J4Y7 as seed ortholog is 100%.

Group of orthologs #271. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:291 S.invicta:407

Q5KLS2              	100.00%		E9I891              	100.00%
Bootstrap support for Q5KLS2 as seed ortholog is 100%.
Bootstrap support for E9I891 as seed ortholog is 100%.

Group of orthologs #272. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 S.invicta:406

Q5KDR1              	100.00%		E9IZJ9              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for E9IZJ9 as seed ortholog is 100%.

Group of orthologs #273. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 S.invicta:404

Q5KH01              	100.00%		E9ICY6              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for E9ICY6 as seed ortholog is 100%.

Group of orthologs #274. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:299 S.invicta:284

Q5KG30              	100.00%		E9IGK0              	100.00%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for E9IGK0 as seed ortholog is 100%.

Group of orthologs #275. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:174 S.invicta:133

P0CO88              	100.00%		E9INW3              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 100%.
Bootstrap support for E9INW3 as seed ortholog is 99%.

Group of orthologs #276. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:340 S.invicta:401

Q5KFU0              	100.00%		E9J122              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for E9J122 as seed ortholog is 100%.

Group of orthologs #277. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:161 S.invicta:19

Q5KKV1              	100.00%		E9ISV0              	100.00%
Bootstrap support for Q5KKV1 as seed ortholog is 100%.
Bootstrap support for E9ISV0 as seed ortholog is 72%.
Alternative seed ortholog is E9J2G0 (19 bits away from this cluster)

Group of orthologs #278. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 S.invicta:400

Q5KQ25              	100.00%		E9J6E5              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for E9J6E5 as seed ortholog is 100%.

Group of orthologs #279. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 S.invicta:399

Q5KHB5              	100.00%		E9IW73              	100.00%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for E9IW73 as seed ortholog is 100%.

Group of orthologs #280. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:155 S.invicta:245

Q5KLZ4              	100.00%		E9J265              	100.00%
Bootstrap support for Q5KLZ4 as seed ortholog is 99%.
Bootstrap support for E9J265 as seed ortholog is 100%.

Group of orthologs #281. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 S.invicta:398

Q5KNU1              	100.00%		E9I9A8              	100.00%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for E9I9A8 as seed ortholog is 100%.

Group of orthologs #282. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:275 S.invicta:398

Q5KPN7              	100.00%		E9IJN8              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for E9IJN8 as seed ortholog is 100%.

Group of orthologs #283. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:262 S.invicta:294

Q5K9L7              	100.00%		E9IY68              	100.00%
Q5KMG8              	39.14%		
Bootstrap support for Q5K9L7 as seed ortholog is 100%.
Bootstrap support for E9IY68 as seed ortholog is 100%.

Group of orthologs #284. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:30 S.invicta:396

Q5K7X0              	100.00%		E9IER6              	100.00%
Bootstrap support for Q5K7X0 as seed ortholog is 51%.
Alternative seed ortholog is P0CR40 (30 bits away from this cluster)
Bootstrap support for E9IER6 as seed ortholog is 100%.

Group of orthologs #285. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:223 S.invicta:223

P0CQ90              	100.00%		E9INH2              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for E9INH2 as seed ortholog is 99%.

Group of orthologs #286. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 S.invicta:396

Q5KAU7              	100.00%		E9ILY2              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for E9ILY2 as seed ortholog is 100%.

Group of orthologs #287. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:395 S.invicta:395

P0CR86              	100.00%		E9IWH2              	100.00%
Bootstrap support for P0CR86 as seed ortholog is 100%.
Bootstrap support for E9IWH2 as seed ortholog is 100%.

Group of orthologs #288. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 S.invicta:394

P0CN44              	100.00%		E9IEG7              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for E9IEG7 as seed ortholog is 100%.

Group of orthologs #289. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:222 S.invicta:314

P0CO20              	100.00%		E9IB22              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for E9IB22 as seed ortholog is 100%.

Group of orthologs #290. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 S.invicta:393

Q5KKZ9              	100.00%		E9J8N0              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for E9J8N0 as seed ortholog is 100%.

Group of orthologs #291. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:341 S.invicta:346

F5HFW5              	100.00%		E9J108              	100.00%
Bootstrap support for F5HFW5 as seed ortholog is 100%.
Bootstrap support for E9J108 as seed ortholog is 100%.

Group of orthologs #292. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 S.invicta:391

Q5KPR1              	100.00%		E9INY1              	100.00%
Bootstrap support for Q5KPR1 as seed ortholog is 100%.
Bootstrap support for E9INY1 as seed ortholog is 100%.

Group of orthologs #293. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:104 S.invicta:391

P0CP26              	100.00%		E9J9R4              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 99%.
Bootstrap support for E9J9R4 as seed ortholog is 100%.

Group of orthologs #294. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 S.invicta:391

Q5KMS5              	100.00%		E9JD91              	100.00%
Bootstrap support for Q5KMS5 as seed ortholog is 100%.
Bootstrap support for E9JD91 as seed ortholog is 100%.

Group of orthologs #295. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 S.invicta:390

Q5K8H1              	100.00%		E9IFE6              	100.00%
Bootstrap support for Q5K8H1 as seed ortholog is 100%.
Bootstrap support for E9IFE6 as seed ortholog is 100%.

Group of orthologs #296. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:340 S.invicta:390

Q5KMP0              	100.00%		E9INR7              	100.00%
Bootstrap support for Q5KMP0 as seed ortholog is 100%.
Bootstrap support for E9INR7 as seed ortholog is 100%.

Group of orthologs #297. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:292 S.invicta:389

Q5KCK2              	100.00%		E9INW4              	100.00%
Bootstrap support for Q5KCK2 as seed ortholog is 100%.
Bootstrap support for E9INW4 as seed ortholog is 100%.

Group of orthologs #298. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 S.invicta:389

Q5KJH8              	100.00%		E9IY54              	100.00%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for E9IY54 as seed ortholog is 100%.

Group of orthologs #299. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 S.invicta:162

Q5KID8              	100.00%		E9IBE8              	100.00%
Bootstrap support for Q5KID8 as seed ortholog is 100%.
Bootstrap support for E9IBE8 as seed ortholog is 99%.

Group of orthologs #300. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:219 S.invicta:108

Q5K707              	100.00%		E9IU65              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 100%.
Bootstrap support for E9IU65 as seed ortholog is 99%.

Group of orthologs #301. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 S.invicta:388

Q5K8Z6              	100.00%		E9IT60              	100.00%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for E9IT60 as seed ortholog is 100%.

Group of orthologs #302. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 S.invicta:387

Q5KE15              	100.00%		E9J1L4              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for E9J1L4 as seed ortholog is 100%.

Group of orthologs #303. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 S.invicta:387

Q5KAF2              	100.00%		E9J724              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for E9J724 as seed ortholog is 100%.

Group of orthologs #304. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:385 S.invicta:385

Q5KGV7              	100.00%		E9IEX7              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for E9IEX7 as seed ortholog is 100%.

Group of orthologs #305. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 S.invicta:384

P0CN42              	100.00%		E9IYX5              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for E9IYX5 as seed ortholog is 100%.

Group of orthologs #306. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:69 S.invicta:267

Q5KDL9              	100.00%		E9IT62              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 98%.
Bootstrap support for E9IT62 as seed ortholog is 100%.

Group of orthologs #307. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 S.invicta:383

Q5KJP4              	100.00%		E9IS85              	100.00%
Bootstrap support for Q5KJP4 as seed ortholog is 100%.
Bootstrap support for E9IS85 as seed ortholog is 100%.

Group of orthologs #308. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 S.invicta:382

Q5KEY0              	100.00%		E9J3R2              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for E9J3R2 as seed ortholog is 100%.

Group of orthologs #309. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 S.invicta:382

Q5KNK2              	100.00%		E9J5Z4              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for E9J5Z4 as seed ortholog is 100%.

Group of orthologs #310. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 S.invicta:382

Q5KM29              	100.00%		E9J8N5              	100.00%
Bootstrap support for Q5KM29 as seed ortholog is 100%.
Bootstrap support for E9J8N5 as seed ortholog is 100%.

Group of orthologs #311. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 S.invicta:381

Q5K9K1              	100.00%		E9IQS5              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for E9IQS5 as seed ortholog is 100%.

Group of orthologs #312. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 S.invicta:380

Q5KDQ7              	100.00%		E9J8E6              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for E9J8E6 as seed ortholog is 100%.

Group of orthologs #313. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:231

P0CS42              	100.00%		E9ILC5              	100.00%
Bootstrap support for P0CS42 as seed ortholog is 100%.
Bootstrap support for E9ILC5 as seed ortholog is 100%.

Group of orthologs #314. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:96 S.invicta:279

Q5K8Q3              	100.00%		E9IZS4              	100.00%
                    	       		E9JAZ3              	40.20%
Bootstrap support for Q5K8Q3 as seed ortholog is 85%.
Bootstrap support for E9IZS4 as seed ortholog is 100%.

Group of orthologs #315. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 S.invicta:378

Q5KLA7              	100.00%		E9IYB3              	100.00%
Q5KG11              	17.47%		
Bootstrap support for Q5KLA7 as seed ortholog is 100%.
Bootstrap support for E9IYB3 as seed ortholog is 100%.

Group of orthologs #316. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 S.invicta:377

Q5KHT1              	100.00%		E9I9N4              	100.00%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for E9I9N4 as seed ortholog is 100%.

Group of orthologs #317. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 S.invicta:376

Q5KJX0              	100.00%		E9JB54              	100.00%
Q5KDV3              	73.97%		
Bootstrap support for Q5KJX0 as seed ortholog is 100%.
Bootstrap support for E9JB54 as seed ortholog is 100%.

Group of orthologs #318. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 S.invicta:376

Q5KEG3              	100.00%		E9J1K6              	100.00%
Bootstrap support for Q5KEG3 as seed ortholog is 100%.
Bootstrap support for E9J1K6 as seed ortholog is 100%.

Group of orthologs #319. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 S.invicta:375

Q5KBD0              	100.00%		E9IIR4              	100.00%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for E9IIR4 as seed ortholog is 100%.

Group of orthologs #320. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 S.invicta:375

Q5KGA8              	100.00%		E9IP68              	100.00%
Bootstrap support for Q5KGA8 as seed ortholog is 100%.
Bootstrap support for E9IP68 as seed ortholog is 100%.

Group of orthologs #321. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:218 S.invicta:375

Q5KEQ4              	100.00%		E9J1P6              	100.00%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for E9J1P6 as seed ortholog is 100%.

Group of orthologs #322. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 S.invicta:374

Q5KIJ9              	100.00%		E9IFD0              	100.00%
                    	       		E9J8G3              	87.86%
                    	       		E9JCU9              	79.60%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for E9IFD0 as seed ortholog is 100%.

Group of orthologs #323. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 S.invicta:374

P0CP90              	100.00%		E9IBN0              	100.00%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for E9IBN0 as seed ortholog is 100%.

Group of orthologs #324. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 S.invicta:372

P0CN46              	100.00%		E9IDW6              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for E9IDW6 as seed ortholog is 100%.

Group of orthologs #325. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 S.invicta:372

Q5KH85              	100.00%		E9J3Z3              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for E9J3Z3 as seed ortholog is 100%.

Group of orthologs #326. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:41 S.invicta:149

Q5KHE5              	100.00%		E9J3R4              	100.00%
P0CP66              	27.27%		
Bootstrap support for Q5KHE5 as seed ortholog is 86%.
Bootstrap support for E9J3R4 as seed ortholog is 99%.

Group of orthologs #327. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:254

Q5KC09              	100.00%		E9INK5              	100.00%
Bootstrap support for Q5KC09 as seed ortholog is 99%.
Bootstrap support for E9INK5 as seed ortholog is 100%.

Group of orthologs #328. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:136 S.invicta:369

Q5KJI7              	100.00%		E9IEK6              	100.00%
Bootstrap support for Q5KJI7 as seed ortholog is 99%.
Bootstrap support for E9IEK6 as seed ortholog is 100%.

Group of orthologs #329. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 S.invicta:33

Q5KES4              	100.00%		E9JB76              	100.00%
Bootstrap support for Q5KES4 as seed ortholog is 100%.
Bootstrap support for E9JB76 as seed ortholog is 83%.

Group of orthologs #330. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:170 S.invicta:368

Q5KFS1              	100.00%		E9J4H9              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 99%.
Bootstrap support for E9J4H9 as seed ortholog is 100%.

Group of orthologs #331. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 S.invicta:367

Q5KFH8              	100.00%		E9IFZ2              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for E9IFZ2 as seed ortholog is 100%.

Group of orthologs #332. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:280 S.invicta:366

Q5KFV6              	100.00%		E9IKW7              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 99%.
Bootstrap support for E9IKW7 as seed ortholog is 100%.

Group of orthologs #333. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:156 S.invicta:121

Q5KLT3              	100.00%		E9IH60              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 99%.
Bootstrap support for E9IH60 as seed ortholog is 99%.

Group of orthologs #334. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 S.invicta:366

Q5KA97              	100.00%		E9J2Z2              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for E9J2Z2 as seed ortholog is 100%.

Group of orthologs #335. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 S.invicta:278

Q5KB45              	100.00%		E9IFG8              	100.00%
Bootstrap support for Q5KB45 as seed ortholog is 100%.
Bootstrap support for E9IFG8 as seed ortholog is 100%.

Group of orthologs #336. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 S.invicta:365

Q5KIN5              	100.00%		E9JCK3              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for E9JCK3 as seed ortholog is 100%.

Group of orthologs #337. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 S.invicta:364

Q5KE08              	100.00%		E9I9V6              	100.00%
Bootstrap support for Q5KE08 as seed ortholog is 100%.
Bootstrap support for E9I9V6 as seed ortholog is 100%.

Group of orthologs #338. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:39 S.invicta:364

Q5K758              	100.00%		E9IHP3              	100.00%
Bootstrap support for Q5K758 as seed ortholog is 77%.
Bootstrap support for E9IHP3 as seed ortholog is 100%.

Group of orthologs #339. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 S.invicta:364

P0CP20              	100.00%		E9IQ13              	100.00%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for E9IQ13 as seed ortholog is 100%.

Group of orthologs #340. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 S.invicta:364

Q5KML5              	100.00%		E9ISU6              	100.00%
Bootstrap support for Q5KML5 as seed ortholog is 100%.
Bootstrap support for E9ISU6 as seed ortholog is 100%.

Group of orthologs #341. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 S.invicta:363

Q5KFJ6              	100.00%		E9IB23              	100.00%
Bootstrap support for Q5KFJ6 as seed ortholog is 100%.
Bootstrap support for E9IB23 as seed ortholog is 100%.

Group of orthologs #342. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:252 S.invicta:358

P0CP88              	100.00%		E9IIH4              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for E9IIH4 as seed ortholog is 100%.

Group of orthologs #343. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 S.invicta:358

P0CR70              	100.00%		E9IQE3              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for E9IQE3 as seed ortholog is 100%.

Group of orthologs #344. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 S.invicta:358

P0CM38              	100.00%		E9IRW1              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for E9IRW1 as seed ortholog is 100%.

Group of orthologs #345. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 S.invicta:358

Q5KF87              	100.00%		E9IKM8              	100.00%
Bootstrap support for Q5KF87 as seed ortholog is 100%.
Bootstrap support for E9IKM8 as seed ortholog is 100%.

Group of orthologs #346. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:150 S.invicta:151

Q5KP84              	100.00%		E9IFT9              	100.00%
Bootstrap support for Q5KP84 as seed ortholog is 100%.
Bootstrap support for E9IFT9 as seed ortholog is 99%.

Group of orthologs #347. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 S.invicta:148

P0CP02              	100.00%		E9IPR7              	100.00%
                    	       		E9IXP2              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for E9IPR7 as seed ortholog is 100%.
Bootstrap support for E9IXP2 as seed ortholog is 100%.

Group of orthologs #348. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 S.invicta:355

Q5KEK1              	100.00%		E9IIK5              	100.00%
Bootstrap support for Q5KEK1 as seed ortholog is 100%.
Bootstrap support for E9IIK5 as seed ortholog is 100%.

Group of orthologs #349. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 S.invicta:355

Q5K8Z3              	100.00%		E9IP06              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for E9IP06 as seed ortholog is 100%.

Group of orthologs #350. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 S.invicta:355

P0CP50              	100.00%		E9J1J2              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for E9J1J2 as seed ortholog is 100%.

Group of orthologs #351. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 S.invicta:354

Q5KGZ9              	100.00%		E9IVX0              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for E9IVX0 as seed ortholog is 100%.

Group of orthologs #352. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 S.invicta:354

Q5KQ20              	100.00%		E9J721              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for E9J721 as seed ortholog is 100%.

Group of orthologs #353. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:119 S.invicta:180

Q5KLR7              	100.00%		E9JCY6              	100.00%
Bootstrap support for Q5KLR7 as seed ortholog is 99%.
Bootstrap support for E9JCY6 as seed ortholog is 99%.

Group of orthologs #354. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:160 S.invicta:280

Q5KBC8              	100.00%		E9I9R9              	100.00%
Bootstrap support for Q5KBC8 as seed ortholog is 99%.
Bootstrap support for E9I9R9 as seed ortholog is 100%.

Group of orthologs #355. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:285 S.invicta:353

Q5KE74              	100.00%		E9J4Y5              	100.00%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for E9J4Y5 as seed ortholog is 100%.

Group of orthologs #356. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 S.invicta:353

Q5KH76              	100.00%		E9J2E8              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for E9J2E8 as seed ortholog is 100%.

Group of orthologs #357. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:295 S.invicta:263

Q5KHR9              	100.00%		E9IB39              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 100%.
Bootstrap support for E9IB39 as seed ortholog is 100%.

Group of orthologs #358. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 S.invicta:351

Q5KEV1              	100.00%		E9IFK4              	100.00%
                    	       		E9IL97              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for E9IFK4 as seed ortholog is 100%.
Bootstrap support for E9IL97 as seed ortholog is 100%.

Group of orthologs #359. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:271 S.invicta:230

Q5KMP3              	100.00%		E9INR1              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for E9INR1 as seed ortholog is 100%.

Group of orthologs #360. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 S.invicta:351

Q5KKQ4              	100.00%		E9IR20              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for E9IR20 as seed ortholog is 100%.

Group of orthologs #361. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 S.invicta:350

Q5KH75              	100.00%		E9IH46              	100.00%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for E9IH46 as seed ortholog is 100%.

Group of orthologs #362. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 S.invicta:350

P0CM62              	100.00%		E9ISL3              	100.00%
Bootstrap support for P0CM62 as seed ortholog is 100%.
Bootstrap support for E9ISL3 as seed ortholog is 100%.

Group of orthologs #363. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 S.invicta:112

Q5KEJ4              	100.00%		E9IZQ4              	100.00%
Bootstrap support for Q5KEJ4 as seed ortholog is 100%.
Bootstrap support for E9IZQ4 as seed ortholog is 98%.

Group of orthologs #364. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 S.invicta:348

P0CQ60              	100.00%		E9I9K7              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for E9I9K7 as seed ortholog is 100%.

Group of orthologs #365. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 S.invicta:348

Q5KGD7              	100.00%		E9IDW7              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for E9IDW7 as seed ortholog is 100%.

Group of orthologs #366. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 S.invicta:255

P0CQ18              	100.00%		E9J3A6              	100.00%
P0CQ20              	50.50%		
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for E9J3A6 as seed ortholog is 100%.

Group of orthologs #367. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 S.invicta:346

Q5KJ97              	100.00%		E9J798              	100.00%
Bootstrap support for Q5KJ97 as seed ortholog is 100%.
Bootstrap support for E9J798 as seed ortholog is 100%.

Group of orthologs #368. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 S.invicta:343

P0CS12              	100.00%		E9IYA3              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for E9IYA3 as seed ortholog is 100%.

Group of orthologs #369. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:294 S.invicta:342

Q5KEJ6              	100.00%		E9II14              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for E9II14 as seed ortholog is 100%.

Group of orthologs #370. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 S.invicta:260

Q5KGR5              	100.00%		E9ISX8              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 100%.
Bootstrap support for E9ISX8 as seed ortholog is 100%.

Group of orthologs #371. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 S.invicta:342

Q5K7Y1              	100.00%		E9J3E8              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 100%.
Bootstrap support for E9J3E8 as seed ortholog is 100%.

Group of orthologs #372. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 S.invicta:341

Q5K772              	100.00%		E9J3G9              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for E9J3G9 as seed ortholog is 100%.

Group of orthologs #373. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:225 S.invicta:341

Q5KLQ5              	100.00%		E9IQB7              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for E9IQB7 as seed ortholog is 100%.

Group of orthologs #374. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 S.invicta:247

Q5KJ20              	100.00%		E9IM87              	100.00%
                    	       		E9IM88              	42.00%
                    	       		E9IRC3              	23.62%
                    	       		E9IRC2              	22.50%
                    	       		E9IFX3              	21.75%
Bootstrap support for Q5KJ20 as seed ortholog is 100%.
Bootstrap support for E9IM87 as seed ortholog is 100%.

Group of orthologs #375. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 S.invicta:339

Q5KAS4              	100.00%		E9ILM5              	100.00%
Bootstrap support for Q5KAS4 as seed ortholog is 100%.
Bootstrap support for E9ILM5 as seed ortholog is 100%.

Group of orthologs #376. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 S.invicta:339

Q5KGD3              	100.00%		E9IHJ3              	100.00%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for E9IHJ3 as seed ortholog is 100%.

Group of orthologs #377. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 S.invicta:339

Q5KAS7              	100.00%		E9J331              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for E9J331 as seed ortholog is 100%.

Group of orthologs #378. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:248

Q5KJ99              	100.00%		E9JCN0              	100.00%
Bootstrap support for Q5KJ99 as seed ortholog is 99%.
Bootstrap support for E9JCN0 as seed ortholog is 100%.

Group of orthologs #379. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 S.invicta:235

Q5KAT1              	100.00%		E9IEW6              	100.00%
Q5KAU3              	67.36%		
Bootstrap support for Q5KAT1 as seed ortholog is 100%.
Bootstrap support for E9IEW6 as seed ortholog is 100%.

Group of orthologs #380. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:182 S.invicta:278

Q5KHS3              	100.00%		E9IT38              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 99%.
Bootstrap support for E9IT38 as seed ortholog is 100%.

Group of orthologs #381. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 S.invicta:336

Q5KHZ2              	100.00%		E9IEA5              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for E9IEA5 as seed ortholog is 100%.

Group of orthologs #382. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:266 S.invicta:336

Q5KL14              	100.00%		E9IE28              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for E9IE28 as seed ortholog is 100%.

Group of orthologs #383. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 S.invicta:335

Q5KQ43              	100.00%		E9IDJ2              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for E9IDJ2 as seed ortholog is 100%.

Group of orthologs #384. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:249 S.invicta:243

Q5KGN7              	100.00%		E9J8E7              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for E9J8E7 as seed ortholog is 100%.

Group of orthologs #385. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 S.invicta:334

Q5KPZ5              	100.00%		E9IJM9              	100.00%
Bootstrap support for Q5KPZ5 as seed ortholog is 100%.
Bootstrap support for E9IJM9 as seed ortholog is 100%.

Group of orthologs #386. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:167 S.invicta:35

Q5KAD7              	100.00%		E9IQS1              	100.00%
Bootstrap support for Q5KAD7 as seed ortholog is 99%.
Bootstrap support for E9IQS1 as seed ortholog is 82%.

Group of orthologs #387. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 S.invicta:331

Q5KCI3              	100.00%		E9IBK9              	100.00%
Bootstrap support for Q5KCI3 as seed ortholog is 100%.
Bootstrap support for E9IBK9 as seed ortholog is 100%.

Group of orthologs #388. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 S.invicta:331

Q5KMA6              	100.00%		E9I9Q0              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for E9I9Q0 as seed ortholog is 100%.

Group of orthologs #389. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:282 S.invicta:275

Q5KKN8              	100.00%		E9J0C8              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for E9J0C8 as seed ortholog is 100%.

Group of orthologs #390. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 S.invicta:330

Q5KIZ1              	100.00%		E9IPQ2              	100.00%
Q5KHK5              	7.13%		
Bootstrap support for Q5KIZ1 as seed ortholog is 100%.
Bootstrap support for E9IPQ2 as seed ortholog is 100%.

Group of orthologs #391. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 S.invicta:330

Q5KQ95              	100.00%		E9ICA6              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 100%.
Bootstrap support for E9ICA6 as seed ortholog is 100%.

Group of orthologs #392. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:176 S.invicta:326

Q5KNQ9              	100.00%		E9IL23              	100.00%
Bootstrap support for Q5KNQ9 as seed ortholog is 99%.
Bootstrap support for E9IL23 as seed ortholog is 100%.

Group of orthologs #393. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 S.invicta:326

Q5KAH4              	100.00%		E9JAX2              	100.00%
Bootstrap support for Q5KAH4 as seed ortholog is 100%.
Bootstrap support for E9JAX2 as seed ortholog is 100%.

Group of orthologs #394. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 S.invicta:325

Q5KMH4              	100.00%		E9I8H9              	100.00%
Bootstrap support for Q5KMH4 as seed ortholog is 100%.
Bootstrap support for E9I8H9 as seed ortholog is 100%.

Group of orthologs #395. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 S.invicta:325

Q5KP39              	100.00%		E9IAW9              	100.00%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for E9IAW9 as seed ortholog is 100%.

Group of orthologs #396. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:18

P0CM16              	100.00%		E9IB24              	100.00%
Bootstrap support for P0CM16 as seed ortholog is 100%.
Bootstrap support for E9IB24 as seed ortholog is 85%.

Group of orthologs #397. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 S.invicta:324

Q5KDP4              	100.00%		E9IK03              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for E9IK03 as seed ortholog is 100%.

Group of orthologs #398. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 S.invicta:324

Q5KKX9              	100.00%		E9IXY6              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 100%.
Bootstrap support for E9IXY6 as seed ortholog is 100%.

Group of orthologs #399. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 S.invicta:324

Q5KDL7              	100.00%		E9J5Y2              	100.00%
Bootstrap support for Q5KDL7 as seed ortholog is 100%.
Bootstrap support for E9J5Y2 as seed ortholog is 100%.

Group of orthologs #400. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:213 S.invicta:195

Q5K9V2              	100.00%		E9IRX8              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for E9IRX8 as seed ortholog is 100%.

Group of orthologs #401. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 S.invicta:323

P0CR16              	100.00%		E9J1R7              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 100%.
Bootstrap support for E9J1R7 as seed ortholog is 100%.

Group of orthologs #402. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 S.invicta:322

Q5KPC1              	100.00%		E9I8Z0              	100.00%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for E9I8Z0 as seed ortholog is 100%.

Group of orthologs #403. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 S.invicta:322

P0CS46              	100.00%		E9IXY7              	100.00%
Bootstrap support for P0CS46 as seed ortholog is 100%.
Bootstrap support for E9IXY7 as seed ortholog is 100%.

Group of orthologs #404. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 S.invicta:322

Q5KEZ5              	100.00%		E9J1B2              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for E9J1B2 as seed ortholog is 100%.

Group of orthologs #405. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 S.invicta:170

Q5KLS5              	100.00%		E9IRU9              	100.00%
                    	       		E9INR5              	6.54%
Bootstrap support for Q5KLS5 as seed ortholog is 100%.
Bootstrap support for E9IRU9 as seed ortholog is 99%.

Group of orthologs #406. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 S.invicta:321

Q5KD79              	100.00%		E9IWY2              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for E9IWY2 as seed ortholog is 100%.

Group of orthologs #407. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:249 S.invicta:321

Q5KK29              	100.00%		E9J3I1              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for E9J3I1 as seed ortholog is 100%.

Group of orthologs #408. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 S.invicta:320

Q5K8W1              	100.00%		E9IGV5              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for E9IGV5 as seed ortholog is 100%.

Group of orthologs #409. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 S.invicta:320

Q5KCC8              	100.00%		E9J713              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for E9J713 as seed ortholog is 100%.

Group of orthologs #410. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 S.invicta:320

Q5KHA6              	100.00%		E9JDH2              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for E9JDH2 as seed ortholog is 100%.

Group of orthologs #411. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 S.invicta:319

Q5KI12              	100.00%		E9IW52              	100.00%
                    	       		E9IW49              	16.74%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for E9IW52 as seed ortholog is 100%.

Group of orthologs #412. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 S.invicta:319

Q5KHS1              	100.00%		E9J4V8              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for E9J4V8 as seed ortholog is 100%.

Group of orthologs #413. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 S.invicta:319

Q5KJ58              	100.00%		E9J9M8              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for E9J9M8 as seed ortholog is 100%.

Group of orthologs #414. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 S.invicta:259

Q5KM94              	100.00%		E9J7A1              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for E9J7A1 as seed ortholog is 100%.

Group of orthologs #415. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:83 S.invicta:318

Q5KFU8              	100.00%		E9IP74              	100.00%
Bootstrap support for Q5KFU8 as seed ortholog is 99%.
Bootstrap support for E9IP74 as seed ortholog is 100%.

Group of orthologs #416. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 S.invicta:318

Q5KCX9              	100.00%		E9IS06              	100.00%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for E9IS06 as seed ortholog is 100%.

Group of orthologs #417. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 S.invicta:318

Q5KQ04              	100.00%		E9IKA1              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for E9IKA1 as seed ortholog is 100%.

Group of orthologs #418. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 S.invicta:317

Q5KC90              	100.00%		E9ITI0              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for E9ITI0 as seed ortholog is 100%.

Group of orthologs #419. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:58 S.invicta:147

Q5KD56              	100.00%		E9IM08              	100.00%
Bootstrap support for Q5KD56 as seed ortholog is 82%.
Bootstrap support for E9IM08 as seed ortholog is 99%.

Group of orthologs #420. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:187 S.invicta:314

Q5K9D3              	100.00%		E9J836              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 99%.
Bootstrap support for E9J836 as seed ortholog is 100%.

Group of orthologs #421. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:217

Q5KN48              	100.00%		E9IBT8              	100.00%
Bootstrap support for Q5KN48 as seed ortholog is 99%.
Bootstrap support for E9IBT8 as seed ortholog is 100%.

Group of orthologs #422. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 S.invicta:313

Q5KM85              	100.00%		E9J4Q3              	100.00%
Bootstrap support for Q5KM85 as seed ortholog is 100%.
Bootstrap support for E9J4Q3 as seed ortholog is 100%.

Group of orthologs #423. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:55

Q5KAN2              	100.00%		E9IG65              	100.00%
                    	       		E9JB08              	46.57%
Bootstrap support for Q5KAN2 as seed ortholog is 99%.
Bootstrap support for E9IG65 as seed ortholog is 93%.

Group of orthologs #424. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:246 S.invicta:242

P0CS32              	100.00%		E9I9N8              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for E9I9N8 as seed ortholog is 100%.

Group of orthologs #425. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 S.invicta:167

Q5K9S7              	100.00%		E9IKP8              	100.00%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for E9IKP8 as seed ortholog is 99%.

Group of orthologs #426. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 S.invicta:312

Q5KJU2              	100.00%		E9J1P1              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for E9J1P1 as seed ortholog is 100%.

Group of orthologs #427. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 S.invicta:311

Q5KMY7              	100.00%		E9J3W2              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for E9J3W2 as seed ortholog is 100%.

Group of orthologs #428. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 S.invicta:310

Q5KIQ7              	100.00%		E9IJF3              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for E9IJF3 as seed ortholog is 100%.

Group of orthologs #429. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 S.invicta:309

Q5KEF4              	100.00%		E9I9Z8              	100.00%
                    	       		E9J7N1              	16.37%
Bootstrap support for Q5KEF4 as seed ortholog is 100%.
Bootstrap support for E9I9Z8 as seed ortholog is 100%.

Group of orthologs #430. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 S.invicta:309

Q5KE92              	100.00%		E9ISP6              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for E9ISP6 as seed ortholog is 100%.

Group of orthologs #431. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 S.invicta:309

Q5KQ18              	100.00%		E9IQP9              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for E9IQP9 as seed ortholog is 100%.

Group of orthologs #432. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 S.invicta:309

Q5KJG7              	100.00%		E9IYN9              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for E9IYN9 as seed ortholog is 100%.

Group of orthologs #433. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 S.invicta:166

Q5KF69              	100.00%		E9JAJ2              	100.00%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for E9JAJ2 as seed ortholog is 100%.

Group of orthologs #434. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:307

Q5KIV1              	100.00%		E9IBI4              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for E9IBI4 as seed ortholog is 100%.

Group of orthologs #435. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 S.invicta:307

Q5KIV0              	100.00%		E9IF39              	100.00%
Bootstrap support for Q5KIV0 as seed ortholog is 100%.
Bootstrap support for E9IF39 as seed ortholog is 100%.

Group of orthologs #436. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 S.invicta:307

Q5KPZ1              	100.00%		E9J8I2              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for E9J8I2 as seed ortholog is 100%.

Group of orthologs #437. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:15 S.invicta:74

Q5KPS8              	100.00%		E9IY53              	100.00%
                    	       		E9IMD3              	27.93%
Bootstrap support for Q5KPS8 as seed ortholog is 68%.
Alternative seed ortholog is P0CN96 (15 bits away from this cluster)
Bootstrap support for E9IY53 as seed ortholog is 95%.

Group of orthologs #438. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 S.invicta:306

Q5KDK5              	100.00%		E9ILZ2              	100.00%
Bootstrap support for Q5KDK5 as seed ortholog is 100%.
Bootstrap support for E9ILZ2 as seed ortholog is 100%.

Group of orthologs #439. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:161 S.invicta:110

Q5K8I9              	100.00%		E9J264              	100.00%
Bootstrap support for Q5K8I9 as seed ortholog is 100%.
Bootstrap support for E9J264 as seed ortholog is 100%.

Group of orthologs #440. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:225 S.invicta:229

Q5KJJ1              	100.00%		E9IYY2              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for E9IYY2 as seed ortholog is 100%.

Group of orthologs #441. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:181 S.invicta:305

Q5KCK7              	100.00%		E9IFI5              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for E9IFI5 as seed ortholog is 100%.

Group of orthologs #442. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 S.invicta:305

Q5KH66              	100.00%		E9IDT4              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for E9IDT4 as seed ortholog is 100%.

Group of orthologs #443. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 S.invicta:77

Q5KDM0              	100.00%		E9IZA2              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for E9IZA2 as seed ortholog is 99%.

Group of orthologs #444. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 S.invicta:305

P0CN18              	100.00%		E9JB77              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 100%.
Bootstrap support for E9JB77 as seed ortholog is 100%.

Group of orthologs #445. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 S.invicta:304

Q5KJX8              	100.00%		E9IIK2              	100.00%
Bootstrap support for Q5KJX8 as seed ortholog is 100%.
Bootstrap support for E9IIK2 as seed ortholog is 100%.

Group of orthologs #446. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:95 S.invicta:72

Q5K6Z2              	100.00%		E9J0U2              	100.00%
Bootstrap support for Q5K6Z2 as seed ortholog is 99%.
Bootstrap support for E9J0U2 as seed ortholog is 98%.

Group of orthologs #447. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 S.invicta:303

Q5KA36              	100.00%		E9J3V7              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for E9J3V7 as seed ortholog is 100%.

Group of orthologs #448. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 S.invicta:302

Q5KGF3              	100.00%		E9I8J9              	100.00%
Bootstrap support for Q5KGF3 as seed ortholog is 100%.
Bootstrap support for E9I8J9 as seed ortholog is 100%.

Group of orthologs #449. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 S.invicta:302

P0CR50              	100.00%		E9ISD3              	100.00%
Bootstrap support for P0CR50 as seed ortholog is 100%.
Bootstrap support for E9ISD3 as seed ortholog is 100%.

Group of orthologs #450. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:234 S.invicta:302

Q5K6Y3              	100.00%		E9IZ72              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for E9IZ72 as seed ortholog is 100%.

Group of orthologs #451. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:136

P0CQ94              	100.00%		E9J3U5              	100.00%
Bootstrap support for P0CQ94 as seed ortholog is 95%.
Bootstrap support for E9J3U5 as seed ortholog is 98%.

Group of orthologs #452. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 S.invicta:181

Q5KI17              	100.00%		E9IRE2              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for E9IRE2 as seed ortholog is 99%.

Group of orthologs #453. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:256 S.invicta:300

Q5K809              	100.00%		E9JD64              	100.00%
Q5KNE6              	45.05%		E9IJP3              	18.31%
Bootstrap support for Q5K809 as seed ortholog is 100%.
Bootstrap support for E9JD64 as seed ortholog is 100%.

Group of orthologs #454. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 S.invicta:300

Q5KFT4              	100.00%		E9I9W5              	100.00%
Bootstrap support for Q5KFT4 as seed ortholog is 100%.
Bootstrap support for E9I9W5 as seed ortholog is 100%.

Group of orthologs #455. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:138 S.invicta:125

Q5KI67              	100.00%		E9IMQ6              	100.00%
Bootstrap support for Q5KI67 as seed ortholog is 99%.
Bootstrap support for E9IMQ6 as seed ortholog is 99%.

Group of orthologs #456. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 S.invicta:138

Q5KJY8              	100.00%		E9IW80              	100.00%
                    	       		E9J0Q8              	7.64%
                    	       		E9IXG0              	5.73%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for E9IW80 as seed ortholog is 99%.

Group of orthologs #457. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 S.invicta:299

Q5KJD4              	100.00%		E9IYP4              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for E9IYP4 as seed ortholog is 100%.

Group of orthologs #458. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:47

Q5K880              	100.00%		E9J4R7              	100.00%
Bootstrap support for Q5K880 as seed ortholog is 100%.
Bootstrap support for E9J4R7 as seed ortholog is 99%.

Group of orthologs #459. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 S.invicta:297

Q5K7J7              	100.00%		E9IAZ2              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 100%.
Bootstrap support for E9IAZ2 as seed ortholog is 100%.

Group of orthologs #460. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 S.invicta:297

Q5KGN0              	100.00%		E9IW50              	100.00%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for E9IW50 as seed ortholog is 100%.

Group of orthologs #461. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:171 S.invicta:296

Q5KJQ8              	100.00%		E9IMB0              	100.00%
Bootstrap support for Q5KJQ8 as seed ortholog is 99%.
Bootstrap support for E9IMB0 as seed ortholog is 100%.

Group of orthologs #462. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 S.invicta:296

Q5KQ94              	100.00%		E9J4I9              	100.00%
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for E9J4I9 as seed ortholog is 100%.

Group of orthologs #463. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 S.invicta:90

Q5KGF6              	100.00%		E9IE57              	100.00%
Q5K9H6              	9.11%		
Bootstrap support for Q5KGF6 as seed ortholog is 100%.
Bootstrap support for E9IE57 as seed ortholog is 96%.

Group of orthologs #464. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 S.invicta:295

Q5K7W5              	100.00%		E9IA09              	100.00%
Bootstrap support for Q5K7W5 as seed ortholog is 100%.
Bootstrap support for E9IA09 as seed ortholog is 100%.

Group of orthologs #465. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 S.invicta:90

Q5KCI0              	100.00%		E9IBP8              	100.00%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for E9IBP8 as seed ortholog is 100%.

Group of orthologs #466. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 S.invicta:295

Q5KCB2              	100.00%		E9J3H5              	100.00%
Bootstrap support for Q5KCB2 as seed ortholog is 100%.
Bootstrap support for E9J3H5 as seed ortholog is 100%.

Group of orthologs #467. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 S.invicta:295

Q5KH19              	100.00%		E9J3Q9              	100.00%
Bootstrap support for Q5KH19 as seed ortholog is 100%.
Bootstrap support for E9J3Q9 as seed ortholog is 100%.

Group of orthologs #468. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 S.invicta:294

P0CP58              	100.00%		E9IKA2              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for E9IKA2 as seed ortholog is 100%.

Group of orthologs #469. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 S.invicta:293

Q5KQ33              	100.00%		E9I9R1              	100.00%
Bootstrap support for Q5KQ33 as seed ortholog is 100%.
Bootstrap support for E9I9R1 as seed ortholog is 100%.

Group of orthologs #470. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:79 S.invicta:15

Q5KCA0              	100.00%		E9IXM1              	100.00%
Bootstrap support for Q5KCA0 as seed ortholog is 98%.
Bootstrap support for E9IXM1 as seed ortholog is 65%.
Alternative seed ortholog is E9J2G0 (15 bits away from this cluster)

Group of orthologs #471. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 S.invicta:292

Q5KC51              	100.00%		E9IDH5              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for E9IDH5 as seed ortholog is 100%.

Group of orthologs #472. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 S.invicta:292

Q5KGP1              	100.00%		E9IBJ7              	100.00%
Bootstrap support for Q5KGP1 as seed ortholog is 100%.
Bootstrap support for E9IBJ7 as seed ortholog is 100%.

Group of orthologs #473. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 S.invicta:292

Q5KGW0              	100.00%		E9IEG2              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for E9IEG2 as seed ortholog is 100%.

Group of orthologs #474. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 S.invicta:292

Q5KGG9              	100.00%		E9JAU8              	100.00%
Bootstrap support for Q5KGG9 as seed ortholog is 100%.
Bootstrap support for E9JAU8 as seed ortholog is 100%.

Group of orthologs #475. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 S.invicta:291

P0CN60              	100.00%		E9IDX6              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for E9IDX6 as seed ortholog is 100%.

Group of orthologs #476. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 S.invicta:291

Q5KI89              	100.00%		E9I8N9              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for E9I8N9 as seed ortholog is 100%.

Group of orthologs #477. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 S.invicta:141

P0CP12              	100.00%		E9J591              	100.00%
Bootstrap support for P0CP12 as seed ortholog is 100%.
Bootstrap support for E9J591 as seed ortholog is 99%.

Group of orthologs #478. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 S.invicta:291

Q5KKK5              	100.00%		E9IYV3              	100.00%
Bootstrap support for Q5KKK5 as seed ortholog is 100%.
Bootstrap support for E9IYV3 as seed ortholog is 100%.

Group of orthologs #479. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 S.invicta:290

Q5KIJ1              	100.00%		E9ID80              	100.00%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for E9ID80 as seed ortholog is 100%.

Group of orthologs #480. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:233 S.invicta:290

Q5KQ79              	100.00%		E9IAK6              	100.00%
Bootstrap support for Q5KQ79 as seed ortholog is 100%.
Bootstrap support for E9IAK6 as seed ortholog is 100%.

Group of orthologs #481. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 S.invicta:290

Q5K8Z2              	100.00%		E9J779              	100.00%
Bootstrap support for Q5K8Z2 as seed ortholog is 100%.
Bootstrap support for E9J779 as seed ortholog is 100%.

Group of orthologs #482. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:290

Q5K9A8              	100.00%		E9JDH9              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 99%.
Bootstrap support for E9JDH9 as seed ortholog is 100%.

Group of orthologs #483. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 S.invicta:289

Q5KDX8              	100.00%		E9J3I5              	100.00%
Q5KCA3              	7.34%		
Bootstrap support for Q5KDX8 as seed ortholog is 100%.
Bootstrap support for E9J3I5 as seed ortholog is 100%.

Group of orthologs #484. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 S.invicta:288

Q5KCG5              	100.00%		E9IBX6              	100.00%
Bootstrap support for Q5KCG5 as seed ortholog is 100%.
Bootstrap support for E9IBX6 as seed ortholog is 100%.

Group of orthologs #485. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:102

Q5KG83              	100.00%		E9IQC1              	100.00%
                    	       		E9ICP4              	59.35%
                    	       		E9ICP5              	40.88%
                    	       		E9J5F5              	36.72%
                    	       		E9J201              	33.72%
                    	       		E9ILC8              	25.87%
                    	       		E9ISI7              	20.32%
                    	       		E9ICT6              	20.09%
                    	       		E9J6I9              	18.01%
                    	       		E9IQU2              	9.24%
Bootstrap support for Q5KG83 as seed ortholog is 100%.
Bootstrap support for E9IQC1 as seed ortholog is 99%.

Group of orthologs #486. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:287

Q5KCS1              	100.00%		E9I8Z1              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for E9I8Z1 as seed ortholog is 100%.

Group of orthologs #487. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:287

Q5K9Y2              	100.00%		E9IBQ9              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for E9IBQ9 as seed ortholog is 100%.

Group of orthologs #488. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:287

Q5KK40              	100.00%		E9IIN7              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for E9IIN7 as seed ortholog is 100%.

Group of orthologs #489. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:201 S.invicta:287

Q5K9I3              	100.00%		E9ITW3              	100.00%
Bootstrap support for Q5K9I3 as seed ortholog is 99%.
Bootstrap support for E9ITW3 as seed ortholog is 100%.

Group of orthologs #490. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:287

Q5KB98              	100.00%		E9IZJ7              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for E9IZJ7 as seed ortholog is 100%.

Group of orthologs #491. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:287

Q5KNK5              	100.00%		E9IZ67              	100.00%
Bootstrap support for Q5KNK5 as seed ortholog is 93%.
Bootstrap support for E9IZ67 as seed ortholog is 100%.

Group of orthologs #492. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 S.invicta:287

Q5KJJ3              	100.00%		E9J635              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for E9J635 as seed ortholog is 100%.

Group of orthologs #493. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:286

Q5KFD9              	100.00%		E9IU49              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for E9IU49 as seed ortholog is 100%.

Group of orthologs #494. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:63 S.invicta:130

P0CR08              	100.00%		E9JAY7              	100.00%
Bootstrap support for P0CR08 as seed ortholog is 76%.
Bootstrap support for E9JAY7 as seed ortholog is 98%.

Group of orthologs #495. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 S.invicta:285

Q5K9U9              	100.00%		E9ISK2              	100.00%
Bootstrap support for Q5K9U9 as seed ortholog is 100%.
Bootstrap support for E9ISK2 as seed ortholog is 100%.

Group of orthologs #496. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 S.invicta:284

Q5KIJ7              	100.00%		E9IJG4              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for E9IJG4 as seed ortholog is 100%.

Group of orthologs #497. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 S.invicta:284

Q5K8P5              	100.00%		E9IVA9              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for E9IVA9 as seed ortholog is 100%.

Group of orthologs #498. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:223 S.invicta:284

Q5KG73              	100.00%		E9J1P2              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 100%.
Bootstrap support for E9J1P2 as seed ortholog is 100%.

Group of orthologs #499. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 S.invicta:90

Q5KP89              	100.00%		E9IW72              	100.00%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for E9IW72 as seed ortholog is 93%.

Group of orthologs #500. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 S.invicta:282

Q5KGE9              	100.00%		E9IGP1              	100.00%
Bootstrap support for Q5KGE9 as seed ortholog is 100%.
Bootstrap support for E9IGP1 as seed ortholog is 100%.

Group of orthologs #501. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:78

Q5KCR3              	100.00%		E9J899              	100.00%
Bootstrap support for Q5KCR3 as seed ortholog is 99%.
Bootstrap support for E9J899 as seed ortholog is 82%.

Group of orthologs #502. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 S.invicta:281

Q5K947              	100.00%		E9IB66              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for E9IB66 as seed ortholog is 100%.

Group of orthologs #503. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:18 S.invicta:153

Q5KLW0              	100.00%		E9IE37              	100.00%
Bootstrap support for Q5KLW0 as seed ortholog is 62%.
Alternative seed ortholog is Q5K7L0 (18 bits away from this cluster)
Bootstrap support for E9IE37 as seed ortholog is 99%.

Group of orthologs #504. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 S.invicta:281

Q5K9R5              	100.00%		E9IX00              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for E9IX00 as seed ortholog is 100%.

Group of orthologs #505. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 S.invicta:281

Q5KNI6              	100.00%		E9JDA4              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for E9JDA4 as seed ortholog is 100%.

Group of orthologs #506. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 S.invicta:280

P0CN50              	100.00%		E9IE19              	100.00%
Bootstrap support for P0CN50 as seed ortholog is 100%.
Bootstrap support for E9IE19 as seed ortholog is 100%.

Group of orthologs #507. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 S.invicta:280

Q5KGE3              	100.00%		E9IDF0              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for E9IDF0 as seed ortholog is 100%.

Group of orthologs #508. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 S.invicta:280

Q5KPS9              	100.00%		E9INC1              	100.00%
Bootstrap support for Q5KPS9 as seed ortholog is 100%.
Bootstrap support for E9INC1 as seed ortholog is 100%.

Group of orthologs #509. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 S.invicta:279

Q5KMY5              	100.00%		E9I8J3              	100.00%
Bootstrap support for Q5KMY5 as seed ortholog is 100%.
Bootstrap support for E9I8J3 as seed ortholog is 100%.

Group of orthologs #510. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 S.invicta:279

Q5KEX2              	100.00%		E9IL98              	100.00%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for E9IL98 as seed ortholog is 100%.

Group of orthologs #511. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:75 S.invicta:112

Q5KDV8              	100.00%		E9IY49              	100.00%
Bootstrap support for Q5KDV8 as seed ortholog is 99%.
Bootstrap support for E9IY49 as seed ortholog is 100%.

Group of orthologs #512. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:122 S.invicta:35

Q5KDT4              	100.00%		E9IMK3              	100.00%
Q5KD75              	7.62%		
Bootstrap support for Q5KDT4 as seed ortholog is 99%.
Bootstrap support for E9IMK3 as seed ortholog is 82%.

Group of orthologs #513. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 S.invicta:278

Q5K9K4              	100.00%		E9IE20              	100.00%
Bootstrap support for Q5K9K4 as seed ortholog is 100%.
Bootstrap support for E9IE20 as seed ortholog is 100%.

Group of orthologs #514. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 S.invicta:278

Q5K7Z7              	100.00%		E9J0W9              	100.00%
Bootstrap support for Q5K7Z7 as seed ortholog is 100%.
Bootstrap support for E9J0W9 as seed ortholog is 100%.

Group of orthologs #515. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:174 S.invicta:278

Q5KLL4              	100.00%		E9J1R8              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for E9J1R8 as seed ortholog is 100%.

Group of orthologs #516. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:157 S.invicta:278

Q5KAK1              	100.00%		E9JD25              	100.00%
Bootstrap support for Q5KAK1 as seed ortholog is 100%.
Bootstrap support for E9JD25 as seed ortholog is 100%.

Group of orthologs #517. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 S.invicta:277

Q5KPY7              	100.00%		E9IIE2              	100.00%
Q5KKM8              	21.98%		E9IID7              	14.91%
Bootstrap support for Q5KPY7 as seed ortholog is 100%.
Bootstrap support for E9IIE2 as seed ortholog is 100%.

Group of orthologs #518. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:202 S.invicta:277

Q5KDX3              	100.00%		E9IUF3              	100.00%
Bootstrap support for Q5KDX3 as seed ortholog is 100%.
Bootstrap support for E9IUF3 as seed ortholog is 100%.

Group of orthologs #519. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 S.invicta:277

Q5KM38              	100.00%		E9IRK7              	100.00%
Bootstrap support for Q5KM38 as seed ortholog is 100%.
Bootstrap support for E9IRK7 as seed ortholog is 100%.

Group of orthologs #520. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:26 S.invicta:48

Q5K854              	100.00%		E9JCL1              	100.00%
Q5KJY2              	15.08%		
Bootstrap support for Q5K854 as seed ortholog is 87%.
Bootstrap support for E9JCL1 as seed ortholog is 98%.

Group of orthologs #521. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 S.invicta:80

Q5KCX8              	100.00%		E9IAN7              	100.00%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for E9IAN7 as seed ortholog is 94%.

Group of orthologs #522. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 S.invicta:276

Q5KCK3              	100.00%		E9IEA4              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for E9IEA4 as seed ortholog is 100%.

Group of orthologs #523. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:140 S.invicta:232

P0CM04              	100.00%		E9J5G3              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 99%.
Bootstrap support for E9J5G3 as seed ortholog is 100%.

Group of orthologs #524. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:151 S.invicta:274

Q5KFG2              	100.00%		E9IBT3              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for E9IBT3 as seed ortholog is 100%.

Group of orthologs #525. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 S.invicta:274

Q5KMT6              	100.00%		E9IG42              	100.00%
Bootstrap support for Q5KMT6 as seed ortholog is 100%.
Bootstrap support for E9IG42 as seed ortholog is 100%.

Group of orthologs #526. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 S.invicta:274

Q5KBP8              	100.00%		E9IRS3              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for E9IRS3 as seed ortholog is 100%.

Group of orthologs #527. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 S.invicta:274

Q5KJ40              	100.00%		E9JD18              	100.00%
Bootstrap support for Q5KJ40 as seed ortholog is 100%.
Bootstrap support for E9JD18 as seed ortholog is 100%.

Group of orthologs #528. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 S.invicta:273

Q5KLV9              	100.00%		E9IJD6              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for E9IJD6 as seed ortholog is 100%.

Group of orthologs #529. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 S.invicta:215

Q5KD50              	100.00%		E9JD38              	100.00%
                    	       		E9ILW0              	14.78%
Bootstrap support for Q5KD50 as seed ortholog is 100%.
Bootstrap support for E9JD38 as seed ortholog is 100%.

Group of orthologs #530. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 S.invicta:190

Q5KN69              	100.00%		E9ID85              	100.00%
Bootstrap support for Q5KN69 as seed ortholog is 100%.
Bootstrap support for E9ID85 as seed ortholog is 100%.

Group of orthologs #531. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 S.invicta:271

Q5KHK1              	100.00%		E9I9I9              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for E9I9I9 as seed ortholog is 100%.

Group of orthologs #532. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 S.invicta:225

Q5KKE2              	100.00%		E9IKW0              	100.00%
Bootstrap support for Q5KKE2 as seed ortholog is 100%.
Bootstrap support for E9IKW0 as seed ortholog is 100%.

Group of orthologs #533. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:202

Q5KDC2              	100.00%		E9J3G3              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 99%.
Bootstrap support for E9J3G3 as seed ortholog is 100%.

Group of orthologs #534. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:161 S.invicta:271

Q5KLS0              	100.00%		E9IWN0              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for E9IWN0 as seed ortholog is 100%.

Group of orthologs #535. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:40 S.invicta:26

Q5KNV3              	100.00%		E9ILB5              	100.00%
Bootstrap support for Q5KNV3 as seed ortholog is 84%.
Bootstrap support for E9ILB5 as seed ortholog is 68%.
Alternative seed ortholog is E9IY55 (26 bits away from this cluster)

Group of orthologs #536. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 S.invicta:269

Q5KAQ7              	100.00%		E9IDH8              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for E9IDH8 as seed ortholog is 100%.

Group of orthologs #537. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 S.invicta:269

Q5KFC5              	100.00%		E9IZV0              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for E9IZV0 as seed ortholog is 100%.

Group of orthologs #538. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:269

Q5KKC2              	100.00%		E9J3A2              	100.00%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for E9J3A2 as seed ortholog is 100%.

Group of orthologs #539. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 S.invicta:269

Q5KIP3              	100.00%		E9J8R8              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for E9J8R8 as seed ortholog is 100%.

Group of orthologs #540. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 S.invicta:268

P0CP10              	100.00%		E9IIV5              	100.00%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for E9IIV5 as seed ortholog is 100%.

Group of orthologs #541. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 S.invicta:268

Q5KJ33              	100.00%		E9IAV8              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for E9IAV8 as seed ortholog is 100%.

Group of orthologs #542. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 S.invicta:134

Q5KB90              	100.00%		E9J1A7              	100.00%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for E9J1A7 as seed ortholog is 99%.

Group of orthologs #543. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 S.invicta:127

Q5KIM3              	100.00%		E9IW09              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for E9IW09 as seed ortholog is 99%.

Group of orthologs #544. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 S.invicta:268

Q5KCK0              	100.00%		E9J778              	100.00%
Bootstrap support for Q5KCK0 as seed ortholog is 100%.
Bootstrap support for E9J778 as seed ortholog is 100%.

Group of orthologs #545. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 S.invicta:267

Q5K917              	100.00%		E9IA56              	100.00%
Q5K8E2              	16.14%		
Bootstrap support for Q5K917 as seed ortholog is 100%.
Bootstrap support for E9IA56 as seed ortholog is 100%.

Group of orthologs #546. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 S.invicta:267

Q5KNA1              	100.00%		E9J651              	100.00%
                    	       		E9IS33              	76.44%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for E9J651 as seed ortholog is 100%.

Group of orthologs #547. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 S.invicta:267

Q5KIT6              	100.00%		E9ICA4              	100.00%
Bootstrap support for Q5KIT6 as seed ortholog is 100%.
Bootstrap support for E9ICA4 as seed ortholog is 100%.

Group of orthologs #548. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 S.invicta:267

Q5KFM4              	100.00%		E9ITG8              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for E9ITG8 as seed ortholog is 100%.

Group of orthologs #549. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:265

Q5KIW0              	100.00%		E9IBI5              	100.00%
                    	       		E9JAF8              	21.40%
Bootstrap support for Q5KIW0 as seed ortholog is 99%.
Bootstrap support for E9IBI5 as seed ortholog is 100%.

Group of orthologs #550. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 S.invicta:265

Q5K8J5              	100.00%		E9IV44              	100.00%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for E9IV44 as seed ortholog is 100%.

Group of orthologs #551. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 S.invicta:264

Q5K6T5              	100.00%		E9IA33              	100.00%
Bootstrap support for Q5K6T5 as seed ortholog is 100%.
Bootstrap support for E9IA33 as seed ortholog is 100%.

Group of orthologs #552. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 S.invicta:264

Q5K7E4              	100.00%		E9IA43              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 100%.
Bootstrap support for E9IA43 as seed ortholog is 100%.

Group of orthologs #553. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 S.invicta:264

Q5KN95              	100.00%		E9IZW6              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for E9IZW6 as seed ortholog is 100%.

Group of orthologs #554. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:17

Q5K705              	100.00%		E9IJU0              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 99%.
Bootstrap support for E9IJU0 as seed ortholog is 56%.
Alternative seed ortholog is E9IGM1 (17 bits away from this cluster)

Group of orthologs #555. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:158 S.invicta:184

Q5KH15              	100.00%		E9IW35              	100.00%
Bootstrap support for Q5KH15 as seed ortholog is 99%.
Bootstrap support for E9IW35 as seed ortholog is 100%.

Group of orthologs #556. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 S.invicta:262

Q5K902              	100.00%		E9IJM8              	100.00%
Bootstrap support for Q5K902 as seed ortholog is 100%.
Bootstrap support for E9IJM8 as seed ortholog is 100%.

Group of orthologs #557. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 S.invicta:219

Q5KJU9              	100.00%		E9IDA5              	100.00%
Bootstrap support for Q5KJU9 as seed ortholog is 100%.
Bootstrap support for E9IDA5 as seed ortholog is 100%.

Group of orthologs #558. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:152 S.invicta:155

P0CR30              	100.00%		E9IZM4              	100.00%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for E9IZM4 as seed ortholog is 100%.

Group of orthologs #559. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 S.invicta:118

P0CO42              	100.00%		E9J058              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 100%.
Bootstrap support for E9J058 as seed ortholog is 99%.

Group of orthologs #560. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:54 S.invicta:260

Q5KCE8              	100.00%		E9IJ22              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 96%.
Bootstrap support for E9IJ22 as seed ortholog is 100%.

Group of orthologs #561. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 S.invicta:260

Q5KB64              	100.00%		E9IMM7              	100.00%
Bootstrap support for Q5KB64 as seed ortholog is 100%.
Bootstrap support for E9IMM7 as seed ortholog is 100%.

Group of orthologs #562. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 S.invicta:260

Q5K955              	100.00%		E9IQ50              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for E9IQ50 as seed ortholog is 100%.

Group of orthologs #563. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:201 S.invicta:199

Q5KMX1              	100.00%		E9IGL3              	100.00%
Bootstrap support for Q5KMX1 as seed ortholog is 100%.
Bootstrap support for E9IGL3 as seed ortholog is 100%.

Group of orthologs #564. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 S.invicta:260

Q5KLA2              	100.00%		E9JAR7              	100.00%
Bootstrap support for Q5KLA2 as seed ortholog is 100%.
Bootstrap support for E9JAR7 as seed ortholog is 100%.

Group of orthologs #565. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 S.invicta:259

Q5KJN6              	100.00%		E9IBZ0              	100.00%
                    	       		E9J0Q9              	16.64%
Bootstrap support for Q5KJN6 as seed ortholog is 100%.
Bootstrap support for E9IBZ0 as seed ortholog is 100%.

Group of orthologs #566. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 S.invicta:259

P0CO82              	100.00%		E9IFJ1              	100.00%
Bootstrap support for P0CO82 as seed ortholog is 100%.
Bootstrap support for E9IFJ1 as seed ortholog is 100%.

Group of orthologs #567. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 S.invicta:259

Q5KIG6              	100.00%		E9J8L9              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for E9J8L9 as seed ortholog is 100%.

Group of orthologs #568. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 S.invicta:258

Q5KEA3              	100.00%		E9IBC8              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for E9IBC8 as seed ortholog is 100%.

Group of orthologs #569. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:148

Q5KC50              	100.00%		E9IFF6              	100.00%
Bootstrap support for Q5KC50 as seed ortholog is 99%.
Bootstrap support for E9IFF6 as seed ortholog is 100%.

Group of orthologs #570. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:69

Q5K6V5              	100.00%		E9IXE0              	100.00%
Bootstrap support for Q5K6V5 as seed ortholog is 99%.
Bootstrap support for E9IXE0 as seed ortholog is 99%.

Group of orthologs #571. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:171

Q5KLQ6              	100.00%		E9JDI7              	100.00%
                    	       		E9JCD9              	30.41%
                    	       		E9IWS6              	25.14%
                    	       		E9IUC6              	13.38%
Bootstrap support for Q5KLQ6 as seed ortholog is 99%.
Bootstrap support for E9JDI7 as seed ortholog is 99%.

Group of orthologs #572. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 S.invicta:257

Q5KK57              	100.00%		E9IX13              	100.00%
Q5KN19              	14.02%		
Bootstrap support for Q5KK57 as seed ortholog is 100%.
Bootstrap support for E9IX13 as seed ortholog is 100%.

Group of orthologs #573. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 S.invicta:257

Q5K8Q5              	100.00%		E9IBL9              	100.00%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for E9IBL9 as seed ortholog is 100%.

Group of orthologs #574. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:140 S.invicta:257

Q5KD80              	100.00%		E9IDY9              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 99%.
Bootstrap support for E9IDY9 as seed ortholog is 100%.

Group of orthologs #575. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 S.invicta:9

Q5KI33              	100.00%		E9IEH2              	100.00%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for E9IEH2 as seed ortholog is 57%.
Alternative seed ortholog is E9IGJ8 (9 bits away from this cluster)

Group of orthologs #576. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:183 S.invicta:257

P0CO48              	100.00%		E9IVE5              	100.00%
Bootstrap support for P0CO48 as seed ortholog is 99%.
Bootstrap support for E9IVE5 as seed ortholog is 100%.

Group of orthologs #577. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 S.invicta:257

P0CN92              	100.00%		E9IW57              	100.00%
Bootstrap support for P0CN92 as seed ortholog is 100%.
Bootstrap support for E9IW57 as seed ortholog is 100%.

Group of orthologs #578. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 S.invicta:257

P0CM24              	100.00%		E9J0B4              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for E9J0B4 as seed ortholog is 100%.

Group of orthologs #579. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 S.invicta:189

Q5KN41              	100.00%		E9IP14              	100.00%
Bootstrap support for Q5KN41 as seed ortholog is 100%.
Bootstrap support for E9IP14 as seed ortholog is 100%.

Group of orthologs #580. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 S.invicta:256

Q5KB65              	100.00%		E9J4W4              	100.00%
Bootstrap support for Q5KB65 as seed ortholog is 100%.
Bootstrap support for E9J4W4 as seed ortholog is 100%.

Group of orthologs #581. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 S.invicta:255

Q5KK62              	100.00%		E9IG07              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for E9IG07 as seed ortholog is 100%.

Group of orthologs #582. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:13 S.invicta:97

Q5KCH7              	100.00%		E9J581              	100.00%
Bootstrap support for Q5KCH7 as seed ortholog is 63%.
Alternative seed ortholog is Q5KB17 (13 bits away from this cluster)
Bootstrap support for E9J581 as seed ortholog is 99%.

Group of orthologs #583. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 S.invicta:255

Q5KJZ5              	100.00%		E9IZ80              	100.00%
Bootstrap support for Q5KJZ5 as seed ortholog is 100%.
Bootstrap support for E9IZ80 as seed ortholog is 100%.

Group of orthologs #584. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:138 S.invicta:212

Q5K7Y4              	100.00%		E9IKT0              	100.00%
Bootstrap support for Q5K7Y4 as seed ortholog is 99%.
Bootstrap support for E9IKT0 as seed ortholog is 100%.

Group of orthologs #585. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 S.invicta:198

Q5K8T0              	100.00%		E9J3G1              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for E9J3G1 as seed ortholog is 100%.

Group of orthologs #586. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:6 S.invicta:253

Q5KD15              	100.00%		E9ID57              	100.00%
Q5KEL5              	91.88%		
Q5K981              	56.68%		
Bootstrap support for Q5KD15 as seed ortholog is 56%.
Alternative seed ortholog is Q5KPZ2 (6 bits away from this cluster)
Bootstrap support for E9ID57 as seed ortholog is 100%.

Group of orthologs #587. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 S.invicta:253

Q5KHY1              	100.00%		E9IDS0              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for E9IDS0 as seed ortholog is 100%.

Group of orthologs #588. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:46

Q5KK41              	100.00%		E9IB81              	100.00%
                    	       		E9I9V7              	9.00%
Bootstrap support for Q5KK41 as seed ortholog is 100%.
Bootstrap support for E9IB81 as seed ortholog is 98%.

Group of orthologs #589. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 S.invicta:180

Q5KJS0              	100.00%		E9J980              	100.00%
Bootstrap support for Q5KJS0 as seed ortholog is 100%.
Bootstrap support for E9J980 as seed ortholog is 100%.

Group of orthologs #590. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 S.invicta:251

Q5KFT6              	100.00%		E9IJ02              	100.00%
                    	       		E9J4G6              	18.07%
Bootstrap support for Q5KFT6 as seed ortholog is 100%.
Bootstrap support for E9IJ02 as seed ortholog is 100%.

Group of orthologs #591. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 S.invicta:251

Q5KJQ1              	100.00%		E9IYU6              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for E9IYU6 as seed ortholog is 100%.

Group of orthologs #592. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 S.invicta:250

Q5KDI6              	100.00%		E9I8E9              	100.00%
Bootstrap support for Q5KDI6 as seed ortholog is 100%.
Bootstrap support for E9I8E9 as seed ortholog is 100%.

Group of orthologs #593. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 S.invicta:148

Q5K7H6              	100.00%		E9IY48              	100.00%
Bootstrap support for Q5K7H6 as seed ortholog is 100%.
Bootstrap support for E9IY48 as seed ortholog is 99%.

Group of orthologs #594. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 S.invicta:250

Q5KA19              	100.00%		E9J1U3              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for E9J1U3 as seed ortholog is 100%.

Group of orthologs #595. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 S.invicta:250

Q5KIN9              	100.00%		E9IV49              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for E9IV49 as seed ortholog is 100%.

Group of orthologs #596. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 S.invicta:250

Q5K8A2              	100.00%		E9J5G1              	100.00%
Bootstrap support for Q5K8A2 as seed ortholog is 100%.
Bootstrap support for E9J5G1 as seed ortholog is 100%.

Group of orthologs #597. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 S.invicta:250

Q5K8G6              	100.00%		E9JB10              	100.00%
Bootstrap support for Q5K8G6 as seed ortholog is 100%.
Bootstrap support for E9JB10 as seed ortholog is 100%.

Group of orthologs #598. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:249

Q5K833              	100.00%		E9IBM1              	100.00%
Q5K840              	77.33%		
Bootstrap support for Q5K833 as seed ortholog is 99%.
Bootstrap support for E9IBM1 as seed ortholog is 100%.

Group of orthologs #599. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:249

Q9HFU4              	100.00%		E9I9L0              	100.00%
Bootstrap support for Q9HFU4 as seed ortholog is 98%.
Bootstrap support for E9I9L0 as seed ortholog is 100%.

Group of orthologs #600. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 S.invicta:248

Q5KKR0              	100.00%		E9ILG4              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for E9ILG4 as seed ortholog is 100%.

Group of orthologs #601. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 S.invicta:84

Q5KEZ9              	100.00%		E9JAB2              	100.00%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for E9JAB2 as seed ortholog is 95%.

Group of orthologs #602. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 S.invicta:248

Q5KPW7              	100.00%		E9J3D7              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for E9J3D7 as seed ortholog is 100%.

Group of orthologs #603. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 S.invicta:247

Q5KLY2              	100.00%		E9J1S0              	100.00%
P0CN76              	38.02%		
Bootstrap support for Q5KLY2 as seed ortholog is 100%.
Bootstrap support for E9J1S0 as seed ortholog is 100%.

Group of orthologs #604. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 S.invicta:247

Q5KLY0              	100.00%		E9IFD1              	100.00%
Bootstrap support for Q5KLY0 as seed ortholog is 100%.
Bootstrap support for E9IFD1 as seed ortholog is 100%.

Group of orthologs #605. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 S.invicta:247

Q5KNU5              	100.00%		E9IT11              	100.00%
Bootstrap support for Q5KNU5 as seed ortholog is 100%.
Bootstrap support for E9IT11 as seed ortholog is 100%.

Group of orthologs #606. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:132 S.invicta:17

Q5KL88              	100.00%		E9IW46              	100.00%
Bootstrap support for Q5KL88 as seed ortholog is 99%.
Bootstrap support for E9IW46 as seed ortholog is 70%.
Alternative seed ortholog is E9ID32 (17 bits away from this cluster)

Group of orthologs #607. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 S.invicta:245

P0CS14              	100.00%		E9IFF2              	100.00%
Bootstrap support for P0CS14 as seed ortholog is 100%.
Bootstrap support for E9IFF2 as seed ortholog is 100%.

Group of orthologs #608. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:80 S.invicta:89

P0CP82              	100.00%		E9IM86              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 99%.
Bootstrap support for E9IM86 as seed ortholog is 99%.

Group of orthologs #609. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 S.invicta:245

P0CM56              	100.00%		E9IVA3              	100.00%
Bootstrap support for P0CM56 as seed ortholog is 100%.
Bootstrap support for E9IVA3 as seed ortholog is 100%.

Group of orthologs #610. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 S.invicta:245

Q5K7P6              	100.00%		E9IV06              	100.00%
Bootstrap support for Q5K7P6 as seed ortholog is 100%.
Bootstrap support for E9IV06 as seed ortholog is 100%.

Group of orthologs #611. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 S.invicta:245

Q5KJ01              	100.00%		E9J1S1              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for E9J1S1 as seed ortholog is 100%.

Group of orthologs #612. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 S.invicta:244

Q5K6Y9              	100.00%		E9IFN6              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for E9IFN6 as seed ortholog is 100%.

Group of orthologs #613. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 S.invicta:243

Q5KBS3              	100.00%		E9IG44              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for E9IG44 as seed ortholog is 100%.

Group of orthologs #614. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 S.invicta:243

Q5KPM6              	100.00%		E9IND1              	100.00%
Bootstrap support for Q5KPM6 as seed ortholog is 100%.
Bootstrap support for E9IND1 as seed ortholog is 100%.

Group of orthologs #615. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:242

P0CO04              	100.00%		E9IAQ7              	100.00%
Q5KMT3              	100.00%		E9IYV7              	100.00%
Bootstrap support for P0CO04 as seed ortholog is 99%.
Bootstrap support for Q5KMT3 as seed ortholog is 99%.
Bootstrap support for E9IAQ7 as seed ortholog is 100%.
Bootstrap support for E9IYV7 as seed ortholog is 100%.

Group of orthologs #616. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 S.invicta:125

Q5K9R8              	100.00%		E9IMA2              	100.00%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for E9IMA2 as seed ortholog is 99%.

Group of orthologs #617. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:166 S.invicta:154

Q5KDE0              	100.00%		E9IUS2              	100.00%
Bootstrap support for Q5KDE0 as seed ortholog is 99%.
Bootstrap support for E9IUS2 as seed ortholog is 99%.

Group of orthologs #618. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 S.invicta:242

Q5KP27              	100.00%		E9IKT6              	100.00%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for E9IKT6 as seed ortholog is 100%.

Group of orthologs #619. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:34

Q5KCQ7              	100.00%		E9IBE6              	100.00%
Bootstrap support for Q5KCQ7 as seed ortholog is 99%.
Bootstrap support for E9IBE6 as seed ortholog is 91%.

Group of orthologs #620. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 S.invicta:241

Q5K8D6              	100.00%		E9ILC0              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for E9ILC0 as seed ortholog is 100%.

Group of orthologs #621. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 S.invicta:241

Q5KFT0              	100.00%		E9JDH3              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for E9JDH3 as seed ortholog is 100%.

Group of orthologs #622. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 S.invicta:240

Q5KJJ4              	100.00%		E9I9K5              	100.00%
                    	       		E9J2I3              	6.47%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for E9I9K5 as seed ortholog is 100%.

Group of orthologs #623. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 S.invicta:240

Q5KBS2              	100.00%		E9IDE9              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for E9IDE9 as seed ortholog is 100%.

Group of orthologs #624. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 S.invicta:240

Q5KGP7              	100.00%		E9IAS5              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for E9IAS5 as seed ortholog is 100%.

Group of orthologs #625. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 S.invicta:240

Q5KHX7              	100.00%		E9II25              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 100%.
Bootstrap support for E9II25 as seed ortholog is 100%.

Group of orthologs #626. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 S.invicta:239

Q5KGL6              	100.00%		E9JD90              	100.00%
Bootstrap support for Q5KGL6 as seed ortholog is 100%.
Bootstrap support for E9JD90 as seed ortholog is 100%.

Group of orthologs #627. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:176 S.invicta:114

Q5K7W2              	100.00%		E9JCP9              	100.00%
Q5K7W1              	81.30%		
Bootstrap support for Q5K7W2 as seed ortholog is 100%.
Bootstrap support for E9JCP9 as seed ortholog is 99%.

Group of orthologs #628. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 S.invicta:116

Q5K6V6              	100.00%		E9IIK6              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for E9IIK6 as seed ortholog is 99%.

Group of orthologs #629. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 S.invicta:238

Q5KCD5              	100.00%		E9IDX8              	100.00%
Bootstrap support for Q5KCD5 as seed ortholog is 100%.
Bootstrap support for E9IDX8 as seed ortholog is 100%.

Group of orthologs #630. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 S.invicta:238

Q5KCK9              	100.00%		E9IW29              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for E9IW29 as seed ortholog is 100%.

Group of orthologs #631. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:120

P0CS16              	100.00%		E9JCV2              	100.00%
Bootstrap support for P0CS16 as seed ortholog is 100%.
Bootstrap support for E9JCV2 as seed ortholog is 100%.

Group of orthologs #632. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:42 S.invicta:237

Q5K7Y0              	100.00%		E9IKF8              	100.00%
                    	       		E9IKG5              	56.21%
                    	       		E9IKG3              	45.79%
                    	       		E9IKG4              	45.70%
                    	       		E9JDH0              	42.45%
                    	       		E9IKG7              	30.78%
                    	       		E9IPY7              	26.48%
                    	       		E9IKG6              	25.91%
                    	       		E9IVZ8              	24.47%
                    	       		E9IHX9              	23.90%
                    	       		E9IJ07              	20.84%
                    	       		E9J7B9              	20.08%
                    	       		E9J6C8              	19.60%
                    	       		E9J8D4              	19.41%
                    	       		E9IZ45              	15.87%
                    	       		E9IXG3              	15.30%
                    	       		E9IPH5              	14.24%
                    	       		E9IZ44              	13.19%
                    	       		E9IKG2              	11.28%
                    	       		E9IHK7              	9.94%
Bootstrap support for Q5K7Y0 as seed ortholog is 64%.
Alternative seed ortholog is Q5K918 (42 bits away from this cluster)
Bootstrap support for E9IKF8 as seed ortholog is 100%.

Group of orthologs #633. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 S.invicta:237

P0CQ56              	100.00%		E9II38              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for E9II38 as seed ortholog is 100%.

Group of orthologs #634. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:182 S.invicta:237

Q5KCG6              	100.00%		E9IDU0              	100.00%
Bootstrap support for Q5KCG6 as seed ortholog is 100%.
Bootstrap support for E9IDU0 as seed ortholog is 100%.

Group of orthologs #635. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 S.invicta:237

Q5KNJ6              	100.00%		E9I8L9              	100.00%
Bootstrap support for Q5KNJ6 as seed ortholog is 100%.
Bootstrap support for E9I8L9 as seed ortholog is 100%.

Group of orthologs #636. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 S.invicta:237

P0CN10              	100.00%		E9IW39              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for E9IW39 as seed ortholog is 100%.

Group of orthologs #637. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:60

Q5KQ29              	100.00%		E9ILM7              	100.00%
Bootstrap support for Q5KQ29 as seed ortholog is 94%.
Bootstrap support for E9ILM7 as seed ortholog is 87%.

Group of orthologs #638. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 S.invicta:237

Q5KLK2              	100.00%		E9IUG1              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for E9IUG1 as seed ortholog is 100%.

Group of orthologs #639. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:155 S.invicta:129

Q5KAP0              	100.00%		E9J9Q0              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 100%.
Bootstrap support for E9J9Q0 as seed ortholog is 100%.

Group of orthologs #640. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 S.invicta:237

Q5KNC5              	100.00%		E9JD35              	100.00%
Bootstrap support for Q5KNC5 as seed ortholog is 100%.
Bootstrap support for E9JD35 as seed ortholog is 100%.

Group of orthologs #641. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 S.invicta:236

Q5KF23              	100.00%		E9IK77              	100.00%
Bootstrap support for Q5KF23 as seed ortholog is 100%.
Bootstrap support for E9IK77 as seed ortholog is 100%.

Group of orthologs #642. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 S.invicta:236

P0CN40              	100.00%		E9J025              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for E9J025 as seed ortholog is 100%.

Group of orthologs #643. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:163

Q5KN75              	100.00%		E9IPG7              	100.00%
Bootstrap support for Q5KN75 as seed ortholog is 95%.
Bootstrap support for E9IPG7 as seed ortholog is 99%.

Group of orthologs #644. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 S.invicta:236

Q5KCT5              	100.00%		E9J2C7              	100.00%
Bootstrap support for Q5KCT5 as seed ortholog is 100%.
Bootstrap support for E9J2C7 as seed ortholog is 100%.

Group of orthologs #645. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 S.invicta:235

Q5KNJ8              	100.00%		E9IRS2              	100.00%
                    	       		E9J570              	85.93%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for E9IRS2 as seed ortholog is 100%.

Group of orthologs #646. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 S.invicta:235

Q5KJB8              	100.00%		E9IE30              	100.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for E9IE30 as seed ortholog is 100%.

Group of orthologs #647. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 S.invicta:235

Q5KBW9              	100.00%		E9ILH8              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for E9ILH8 as seed ortholog is 100%.

Group of orthologs #648. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:187 S.invicta:235

Q5KP95              	100.00%		E9ICR6              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for E9ICR6 as seed ortholog is 100%.

Group of orthologs #649. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:2 S.invicta:234

Q5KKN2              	100.00%		E9IRW4              	100.00%
                    	       		E9IWZ2              	16.63%
Bootstrap support for Q5KKN2 as seed ortholog is 52%.
Alternative seed ortholog is Q5KHY6 (2 bits away from this cluster)
Bootstrap support for E9IRW4 as seed ortholog is 100%.

Group of orthologs #650. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 S.invicta:234

Q5K9W9              	100.00%		E9J7T1              	100.00%
Bootstrap support for Q5K9W9 as seed ortholog is 100%.
Bootstrap support for E9J7T1 as seed ortholog is 100%.

Group of orthologs #651. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:233

P0CN94              	100.00%		E9IGV0              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 99%.
Bootstrap support for E9IGV0 as seed ortholog is 100%.

Group of orthologs #652. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 S.invicta:233

Q5KK81              	100.00%		E9IEY4              	100.00%
Bootstrap support for Q5KK81 as seed ortholog is 100%.
Bootstrap support for E9IEY4 as seed ortholog is 100%.

Group of orthologs #653. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:161

Q5KBK7              	100.00%		E9IYI6              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for E9IYI6 as seed ortholog is 100%.

Group of orthologs #654. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:125 S.invicta:233

Q5KJZ3              	100.00%		E9J2Y7              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 99%.
Bootstrap support for E9J2Y7 as seed ortholog is 100%.

Group of orthologs #655. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:48 S.invicta:69

Q5KMM0              	100.00%		E9IVQ3              	100.00%
Q5KML4              	45.26%		E9IU91              	19.27%
                    	       		E9J0Z3              	6.77%
Bootstrap support for Q5KMM0 as seed ortholog is 98%.
Bootstrap support for E9IVQ3 as seed ortholog is 99%.

Group of orthologs #656. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:140

Q5KHD3              	100.00%		E9I9J3              	100.00%
Bootstrap support for Q5KHD3 as seed ortholog is 99%.
Bootstrap support for E9I9J3 as seed ortholog is 99%.

Group of orthologs #657. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 S.invicta:69

Q5KEB3              	100.00%		E9IVD9              	100.00%
Bootstrap support for Q5KEB3 as seed ortholog is 100%.
Bootstrap support for E9IVD9 as seed ortholog is 99%.

Group of orthologs #658. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:68 S.invicta:232

Q5KA78              	100.00%		E9JB45              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 92%.
Bootstrap support for E9JB45 as seed ortholog is 100%.

Group of orthologs #659. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:229

Q5KEN3              	100.00%		E9IZD3              	100.00%
                    	       		E9IZD6              	11.40%
                    	       		E9IZD7              	11.23%
                    	       		E9JAB9              	9.50%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for E9IZD3 as seed ortholog is 100%.

Group of orthologs #660. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:229

Q5K7E0              	100.00%		E9IH97              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for E9IH97 as seed ortholog is 100%.

Group of orthologs #661. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:229

Q5KH08              	100.00%		E9IPX9              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for E9IPX9 as seed ortholog is 100%.

Group of orthologs #662. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 S.invicta:229

Q5K7E6              	100.00%		E9J7T3              	100.00%
Bootstrap support for Q5K7E6 as seed ortholog is 100%.
Bootstrap support for E9J7T3 as seed ortholog is 100%.

Group of orthologs #663. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 S.invicta:228

Q5KAD8              	100.00%		E9IDF5              	100.00%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for E9IDF5 as seed ortholog is 100%.

Group of orthologs #664. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 S.invicta:228

Q5KJ50              	100.00%		E9ICL0              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for E9ICL0 as seed ortholog is 100%.

Group of orthologs #665. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 S.invicta:228

Q5KFU4              	100.00%		E9IUY0              	100.00%
Bootstrap support for Q5KFU4 as seed ortholog is 100%.
Bootstrap support for E9IUY0 as seed ortholog is 100%.

Group of orthologs #666. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 S.invicta:228

Q5K8X8              	100.00%		E9J650              	100.00%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for E9J650 as seed ortholog is 100%.

Group of orthologs #667. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 S.invicta:227

Q5KP63              	100.00%		E9IA24              	100.00%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for E9IA24 as seed ortholog is 100%.

Group of orthologs #668. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 S.invicta:227

P0CR74              	100.00%		E9J1H7              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for E9J1H7 as seed ortholog is 100%.

Group of orthologs #669. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 S.invicta:169

Q5KJV0              	100.00%		E9IQF6              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 100%.
Bootstrap support for E9IQF6 as seed ortholog is 99%.

Group of orthologs #670. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:117 S.invicta:99

Q5KKS0              	100.00%		E9J573              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 98%.
Bootstrap support for E9J573 as seed ortholog is 96%.

Group of orthologs #671. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 S.invicta:225

Q5KIF8              	100.00%		E9J8P5              	100.00%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for E9J8P5 as seed ortholog is 100%.

Group of orthologs #672. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:142

Q5KEK2              	100.00%		E9I8L8              	100.00%
Bootstrap support for Q5KEK2 as seed ortholog is 99%.
Bootstrap support for E9I8L8 as seed ortholog is 99%.

Group of orthologs #673. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 S.invicta:224

Q5KGF9              	100.00%		E9IY58              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for E9IY58 as seed ortholog is 100%.

Group of orthologs #674. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:95 S.invicta:35

Q5KEJ1              	100.00%		E9J6A2              	100.00%
Bootstrap support for Q5KEJ1 as seed ortholog is 99%.
Bootstrap support for E9J6A2 as seed ortholog is 95%.

Group of orthologs #675. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 S.invicta:224

Q5KH61              	100.00%		E9JBW0              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for E9JBW0 as seed ortholog is 100%.

Group of orthologs #676. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 S.invicta:223

Q5KDB3              	100.00%		E9J358              	100.00%
Bootstrap support for Q5KDB3 as seed ortholog is 100%.
Bootstrap support for E9J358 as seed ortholog is 100%.

Group of orthologs #677. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:45 S.invicta:222

Q5KFI9              	100.00%		E9IF03              	100.00%
                    	       		E9IYK4              	16.46%
Bootstrap support for Q5KFI9 as seed ortholog is 85%.
Bootstrap support for E9IF03 as seed ortholog is 100%.

Group of orthologs #678. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 S.invicta:222

Q5K761              	100.00%		E9IPR1              	100.00%
Q5KD20              	5.40%		
Bootstrap support for Q5K761 as seed ortholog is 100%.
Bootstrap support for E9IPR1 as seed ortholog is 100%.

Group of orthologs #679. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 S.invicta:222

Q5KAE4              	100.00%		E9IB04              	100.00%
Bootstrap support for Q5KAE4 as seed ortholog is 100%.
Bootstrap support for E9IB04 as seed ortholog is 100%.

Group of orthologs #680. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:94

Q5KDH2              	100.00%		E9IKC8              	100.00%
Bootstrap support for Q5KDH2 as seed ortholog is 99%.
Bootstrap support for E9IKC8 as seed ortholog is 99%.

Group of orthologs #681. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:63 S.invicta:26

P0CQ42              	100.00%		E9JAU0              	100.00%
Bootstrap support for P0CQ42 as seed ortholog is 98%.
Bootstrap support for E9JAU0 as seed ortholog is 90%.

Group of orthologs #682. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 S.invicta:221

Q5K7Y2              	100.00%		E9IPB4              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for E9IPB4 as seed ortholog is 100%.

Group of orthologs #683. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 S.invicta:221

Q5K8R7              	100.00%		E9JB06              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for E9JB06 as seed ortholog is 100%.

Group of orthologs #684. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:35 S.invicta:220

Q5KEA0              	100.00%		E9I908              	100.00%
Q5KE99              	36.44%		E9IUQ7              	17.75%
Bootstrap support for Q5KEA0 as seed ortholog is 77%.
Bootstrap support for E9I908 as seed ortholog is 100%.

Group of orthologs #685. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 S.invicta:104

Q5KAH0              	100.00%		E9IQQ3              	100.00%
                    	       		E9IYI1              	9.95%
Bootstrap support for Q5KAH0 as seed ortholog is 100%.
Bootstrap support for E9IQQ3 as seed ortholog is 98%.

Group of orthologs #686. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 S.invicta:220

Q5KNH3              	100.00%		E9IAD4              	100.00%
Bootstrap support for Q5KNH3 as seed ortholog is 100%.
Bootstrap support for E9IAD4 as seed ortholog is 100%.

Group of orthologs #687. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:127 S.invicta:146

Q5KEU0              	100.00%		E9ITV6              	100.00%
Bootstrap support for Q5KEU0 as seed ortholog is 100%.
Bootstrap support for E9ITV6 as seed ortholog is 100%.

Group of orthologs #688. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:37 S.invicta:60

P0CQ66              	100.00%		E9J1L8              	100.00%
Bootstrap support for P0CQ66 as seed ortholog is 73%.
Alternative seed ortholog is P0CO18 (37 bits away from this cluster)
Bootstrap support for E9J1L8 as seed ortholog is 86%.

Group of orthologs #689. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 S.invicta:47

Q5KE11              	100.00%		E9J1M2              	100.00%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for E9J1M2 as seed ortholog is 96%.

Group of orthologs #690. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 S.invicta:220

Q5KDD6              	100.00%		E9J409              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for E9J409 as seed ortholog is 100%.

Group of orthologs #691. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 S.invicta:219

Q5KPC8              	100.00%		E9J2L2              	100.00%
                    	       		E9IZX1              	74.23%
Bootstrap support for Q5KPC8 as seed ortholog is 100%.
Bootstrap support for E9J2L2 as seed ortholog is 100%.

Group of orthologs #692. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 S.invicta:80

Q5KC64              	100.00%		E9II49              	100.00%
                    	       		E9ILC9              	13.88%
                    	       		E9IIF1              	6.05%
Bootstrap support for Q5KC64 as seed ortholog is 100%.
Bootstrap support for E9II49 as seed ortholog is 99%.

Group of orthologs #693. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 S.invicta:158

Q5KIB2              	100.00%		E9IAY7              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for E9IAY7 as seed ortholog is 99%.

Group of orthologs #694. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 S.invicta:218

Q5KAQ6              	100.00%		E9INF7              	100.00%
Bootstrap support for Q5KAQ6 as seed ortholog is 100%.
Bootstrap support for E9INF7 as seed ortholog is 100%.

Group of orthologs #695. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 S.invicta:218

Q5KA59              	100.00%		E9J3E0              	100.00%
Bootstrap support for Q5KA59 as seed ortholog is 100%.
Bootstrap support for E9J3E0 as seed ortholog is 100%.

Group of orthologs #696. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:35 S.invicta:37

P0CS76              	100.00%		E9JB03              	100.00%
Bootstrap support for P0CS76 as seed ortholog is 78%.
Bootstrap support for E9JB03 as seed ortholog is 81%.

Group of orthologs #697. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 S.invicta:218

Q5KA10              	100.00%		E9JD98              	100.00%
Bootstrap support for Q5KA10 as seed ortholog is 100%.
Bootstrap support for E9JD98 as seed ortholog is 100%.

Group of orthologs #698. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:55 S.invicta:217

Q5KLM8              	100.00%		E9J719              	100.00%
Q5KI95              	7.37%		E9J718              	20.14%
                    	       		E9I9P2              	5.28%
Bootstrap support for Q5KLM8 as seed ortholog is 93%.
Bootstrap support for E9J719 as seed ortholog is 100%.

Group of orthologs #699. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:48 S.invicta:217

Q5KBJ2              	100.00%		E9IQ04              	100.00%
Q5KBJ5              	44.50%		
Bootstrap support for Q5KBJ2 as seed ortholog is 88%.
Bootstrap support for E9IQ04 as seed ortholog is 100%.

Group of orthologs #700. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 S.invicta:217

P0CM34              	100.00%		E9IDK9              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for E9IDK9 as seed ortholog is 100%.

Group of orthologs #701. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 S.invicta:217

Q5KBY8              	100.00%		E9IWZ6              	100.00%
Bootstrap support for Q5KBY8 as seed ortholog is 100%.
Bootstrap support for E9IWZ6 as seed ortholog is 100%.

Group of orthologs #702. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 S.invicta:217

Q5KC07              	100.00%		E9J1P3              	100.00%
Bootstrap support for Q5KC07 as seed ortholog is 100%.
Bootstrap support for E9J1P3 as seed ortholog is 100%.

Group of orthologs #703. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:68 S.invicta:94

P0CP84              	100.00%		E9J9P4              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 99%.
Bootstrap support for E9J9P4 as seed ortholog is 99%.

Group of orthologs #704. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:102

Q5KGE7              	100.00%		E9IKM7              	100.00%
Bootstrap support for Q5KGE7 as seed ortholog is 99%.
Bootstrap support for E9IKM7 as seed ortholog is 100%.

Group of orthologs #705. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 S.invicta:216

Q5KDF6              	100.00%		E9IXK5              	100.00%
Bootstrap support for Q5KDF6 as seed ortholog is 100%.
Bootstrap support for E9IXK5 as seed ortholog is 100%.

Group of orthologs #706. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 S.invicta:216

Q5KIC5              	100.00%		E9IUR4              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for E9IUR4 as seed ortholog is 100%.

Group of orthologs #707. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 S.invicta:215

Q5KBH5              	100.00%		E9IBI2              	100.00%
Bootstrap support for Q5KBH5 as seed ortholog is 100%.
Bootstrap support for E9IBI2 as seed ortholog is 100%.

Group of orthologs #708. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 S.invicta:215

Q5KDS9              	100.00%		E9IHD0              	100.00%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for E9IHD0 as seed ortholog is 100%.

Group of orthologs #709. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 S.invicta:215

Q5KAQ3              	100.00%		E9IMP1              	100.00%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for E9IMP1 as seed ortholog is 100%.

Group of orthologs #710. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 S.invicta:215

Q5KEZ6              	100.00%		E9ISY2              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for E9ISY2 as seed ortholog is 100%.

Group of orthologs #711. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 S.invicta:215

Q5KG94              	100.00%		E9J4X7              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for E9J4X7 as seed ortholog is 100%.

Group of orthologs #712. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 S.invicta:214

Q5KE84              	100.00%		E9ILH7              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for E9ILH7 as seed ortholog is 100%.

Group of orthologs #713. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:99 S.invicta:69

Q5K7V8              	100.00%		E9IY21              	100.00%
Bootstrap support for Q5K7V8 as seed ortholog is 69%.
Alternative seed ortholog is Q5KQ46 (99 bits away from this cluster)
Bootstrap support for E9IY21 as seed ortholog is 98%.

Group of orthologs #714. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:72 S.invicta:134

Q5KDF7              	100.00%		E9IZZ2              	100.00%
Bootstrap support for Q5KDF7 as seed ortholog is 89%.
Bootstrap support for E9IZZ2 as seed ortholog is 99%.

Group of orthologs #715. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:143 S.invicta:125

Q5KG91              	100.00%		E9ID94              	100.00%
Bootstrap support for Q5KG91 as seed ortholog is 99%.
Bootstrap support for E9ID94 as seed ortholog is 99%.

Group of orthologs #716. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 S.invicta:213

Q5KLE6              	100.00%		E9IFF1              	100.00%
Bootstrap support for Q5KLE6 as seed ortholog is 100%.
Bootstrap support for E9IFF1 as seed ortholog is 100%.

Group of orthologs #717. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:55 S.invicta:33

P0CP78              	100.00%		E9IVJ0              	100.00%
Bootstrap support for P0CP78 as seed ortholog is 98%.
Bootstrap support for E9IVJ0 as seed ortholog is 88%.

Group of orthologs #718. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 S.invicta:213

Q5K8I4              	100.00%		E9J4R1              	100.00%
Bootstrap support for Q5K8I4 as seed ortholog is 100%.
Bootstrap support for E9J4R1 as seed ortholog is 100%.

Group of orthologs #719. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 S.invicta:212

Q5KQ44              	100.00%		E9J2D2              	100.00%
Q5KPV8              	45.75%		
Bootstrap support for Q5KQ44 as seed ortholog is 100%.
Bootstrap support for E9J2D2 as seed ortholog is 100%.

Group of orthologs #720. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 S.invicta:212

Q5KML9              	100.00%		E9JCQ0              	100.00%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for E9JCQ0 as seed ortholog is 100%.

Group of orthologs #721. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 S.invicta:211

Q5K8T6              	100.00%		E9IP94              	100.00%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for E9IP94 as seed ortholog is 100%.

Group of orthologs #722. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 S.invicta:211

Q5KMU2              	100.00%		E9IKS9              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for E9IKS9 as seed ortholog is 100%.

Group of orthologs #723. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 S.invicta:211

Q5KA31              	100.00%		E9J3Y0              	100.00%
Bootstrap support for Q5KA31 as seed ortholog is 100%.
Bootstrap support for E9J3Y0 as seed ortholog is 100%.

Group of orthologs #724. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 S.invicta:210

Q5KBW6              	100.00%		E9IAE5              	100.00%
                    	       		E9IBU3              	74.62%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for E9IAE5 as seed ortholog is 100%.

Group of orthologs #725. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 S.invicta:210

Q5KE33              	100.00%		E9IG51              	100.00%
Bootstrap support for Q5KE33 as seed ortholog is 100%.
Bootstrap support for E9IG51 as seed ortholog is 100%.

Group of orthologs #726. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 S.invicta:210

Q5KFB0              	100.00%		E9IZL7              	100.00%
Bootstrap support for Q5KFB0 as seed ortholog is 100%.
Bootstrap support for E9IZL7 as seed ortholog is 100%.

Group of orthologs #727. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:53 S.invicta:118

Q5K717              	100.00%		E9J8K6              	100.00%
Bootstrap support for Q5K717 as seed ortholog is 94%.
Bootstrap support for E9J8K6 as seed ortholog is 99%.

Group of orthologs #728. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 S.invicta:210

Q5KM82              	100.00%		E9IVX3              	100.00%
Bootstrap support for Q5KM82 as seed ortholog is 100%.
Bootstrap support for E9IVX3 as seed ortholog is 100%.

Group of orthologs #729. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 S.invicta:209

Q5K7Q2              	100.00%		E9IBW0              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for E9IBW0 as seed ortholog is 100%.

Group of orthologs #730. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 S.invicta:209

Q5KNU2              	100.00%		E9IB69              	100.00%
Bootstrap support for Q5KNU2 as seed ortholog is 100%.
Bootstrap support for E9IB69 as seed ortholog is 100%.

Group of orthologs #731. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 S.invicta:164

Q5KJI9              	100.00%		E9IHJ8              	100.00%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for E9IHJ8 as seed ortholog is 99%.

Group of orthologs #732. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 S.invicta:209

Q5KIE9              	100.00%		E9IJS8              	100.00%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for E9IJS8 as seed ortholog is 100%.

Group of orthologs #733. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 S.invicta:209

Q5KMU1              	100.00%		E9J6J3              	100.00%
Bootstrap support for Q5KMU1 as seed ortholog is 100%.
Bootstrap support for E9J6J3 as seed ortholog is 100%.

Group of orthologs #734. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 S.invicta:208

Q5KNS1              	100.00%		E9IH98              	100.00%
Bootstrap support for Q5KNS1 as seed ortholog is 100%.
Bootstrap support for E9IH98 as seed ortholog is 100%.

Group of orthologs #735. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:46 S.invicta:63

Q5KGS1              	100.00%		E9IRE0              	100.00%
Bootstrap support for Q5KGS1 as seed ortholog is 97%.
Bootstrap support for E9IRE0 as seed ortholog is 99%.

Group of orthologs #736. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:98 S.invicta:107

Q5KGB5              	100.00%		E9IXZ0              	100.00%
Bootstrap support for Q5KGB5 as seed ortholog is 99%.
Bootstrap support for E9IXZ0 as seed ortholog is 99%.

Group of orthologs #737. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:207

Q5KBW8              	100.00%		E9I8Z2              	100.00%
Bootstrap support for Q5KBW8 as seed ortholog is 100%.
Bootstrap support for E9I8Z2 as seed ortholog is 100%.

Group of orthologs #738. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:207

Q5KG39              	100.00%		E9IBU1              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for E9IBU1 as seed ortholog is 100%.

Group of orthologs #739. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:207

Q5KIM1              	100.00%		E9IUG9              	100.00%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for E9IUG9 as seed ortholog is 100%.

Group of orthologs #740. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:207

Q5KQ96              	100.00%		E9IPU7              	100.00%
Bootstrap support for Q5KQ96 as seed ortholog is 100%.
Bootstrap support for E9IPU7 as seed ortholog is 100%.

Group of orthologs #741. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:123

Q5KEY2              	100.00%		E9J6R0              	100.00%
Bootstrap support for Q5KEY2 as seed ortholog is 100%.
Bootstrap support for E9J6R0 as seed ortholog is 98%.

Group of orthologs #742. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:125

Q5KGN1              	100.00%		E9JBA0              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 99%.
Bootstrap support for E9JBA0 as seed ortholog is 100%.

Group of orthologs #743. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:207

Q5KP19              	100.00%		E9J5W3              	100.00%
Bootstrap support for Q5KP19 as seed ortholog is 100%.
Bootstrap support for E9J5W3 as seed ortholog is 100%.

Group of orthologs #744. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 S.invicta:207

Q5KLX2              	100.00%		E9JC10              	100.00%
Bootstrap support for Q5KLX2 as seed ortholog is 100%.
Bootstrap support for E9JC10 as seed ortholog is 100%.

Group of orthologs #745. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 S.invicta:204

Q5KDI9              	100.00%		E9IGK9              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for E9IGK9 as seed ortholog is 100%.

Group of orthologs #746. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 S.invicta:204

Q5K9W6              	100.00%		E9J1M7              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for E9J1M7 as seed ortholog is 100%.

Group of orthologs #747. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 S.invicta:204

Q5KCA4              	100.00%		E9J1W3              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for E9J1W3 as seed ortholog is 100%.

Group of orthologs #748. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 S.invicta:203

Q5K890              	100.00%		E9J1A5              	100.00%
                    	       		E9IMV3              	83.91%
Bootstrap support for Q5K890 as seed ortholog is 100%.
Bootstrap support for E9J1A5 as seed ortholog is 100%.

Group of orthologs #749. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 S.invicta:203

Q5KH84              	100.00%		E9J0W8              	100.00%
Bootstrap support for Q5KH84 as seed ortholog is 100%.
Bootstrap support for E9J0W8 as seed ortholog is 100%.

Group of orthologs #750. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:25 S.invicta:203

P0CM46              	100.00%		E9JD97              	100.00%
Bootstrap support for P0CM46 as seed ortholog is 62%.
Alternative seed ortholog is P0CM44 (25 bits away from this cluster)
Bootstrap support for E9JD97 as seed ortholog is 100%.

Group of orthologs #751. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 S.invicta:63

Q5KJM4              	100.00%		E9IH77              	100.00%
Bootstrap support for Q5KJM4 as seed ortholog is 100%.
Bootstrap support for E9IH77 as seed ortholog is 86%.

Group of orthologs #752. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 S.invicta:202

Q5KQ87              	100.00%		E9J4Y0              	100.00%
Bootstrap support for Q5KQ87 as seed ortholog is 100%.
Bootstrap support for E9J4Y0 as seed ortholog is 100%.

Group of orthologs #753. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 S.invicta:202

Q5KJ55              	100.00%		E9JD26              	100.00%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for E9JD26 as seed ortholog is 100%.

Group of orthologs #754. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 S.invicta:201

P0CQ64              	100.00%		E9ICQ4              	100.00%
Bootstrap support for P0CQ64 as seed ortholog is 100%.
Bootstrap support for E9ICQ4 as seed ortholog is 100%.

Group of orthologs #755. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 S.invicta:201

Q5KB37              	100.00%		E9IFT0              	100.00%
Bootstrap support for Q5KB37 as seed ortholog is 100%.
Bootstrap support for E9IFT0 as seed ortholog is 100%.

Group of orthologs #756. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:201

P0CS26              	100.00%		E9IKK7              	100.00%
Bootstrap support for P0CS26 as seed ortholog is 99%.
Bootstrap support for E9IKK7 as seed ortholog is 100%.

Group of orthologs #757. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:149 S.invicta:77

Q5KGJ0              	100.00%		E9IHP4              	100.00%
Bootstrap support for Q5KGJ0 as seed ortholog is 99%.
Bootstrap support for E9IHP4 as seed ortholog is 99%.

Group of orthologs #758. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:125 S.invicta:106

Q5KKH7              	100.00%		E9IGW1              	100.00%
Bootstrap support for Q5KKH7 as seed ortholog is 99%.
Bootstrap support for E9IGW1 as seed ortholog is 99%.

Group of orthologs #759. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:38 S.invicta:135

Q5KGR6              	100.00%		E9IUS3              	100.00%
Bootstrap support for Q5KGR6 as seed ortholog is 97%.
Bootstrap support for E9IUS3 as seed ortholog is 100%.

Group of orthologs #760. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 S.invicta:201

Q5KBT5              	100.00%		E9J4P0              	100.00%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for E9J4P0 as seed ortholog is 100%.

Group of orthologs #761. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 S.invicta:84

Q5KN42              	100.00%		E9JCZ3              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for E9JCZ3 as seed ortholog is 98%.

Group of orthologs #762. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 S.invicta:67

P0CP70              	100.00%		E9ID27              	100.00%
Bootstrap support for P0CP70 as seed ortholog is 100%.
Bootstrap support for E9ID27 as seed ortholog is 97%.

Group of orthologs #763. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:121

Q5KHU8              	100.00%		E9IN45              	100.00%
Bootstrap support for Q5KHU8 as seed ortholog is 99%.
Bootstrap support for E9IN45 as seed ortholog is 99%.

Group of orthologs #764. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 S.invicta:200

Q5KAG9              	100.00%		E9IX39              	100.00%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for E9IX39 as seed ortholog is 100%.

Group of orthologs #765. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 S.invicta:200

Q5KH26              	100.00%		E9J1M9              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for E9J1M9 as seed ortholog is 100%.

Group of orthologs #766. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 S.invicta:96

Q5KCE0              	100.00%		E9IB36              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for E9IB36 as seed ortholog is 99%.

Group of orthologs #767. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 S.invicta:199

Q5K8H5              	100.00%		E9IU67              	100.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for E9IU67 as seed ortholog is 100%.

Group of orthologs #768. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 S.invicta:199

Q5KGH4              	100.00%		E9IX18              	100.00%
Bootstrap support for Q5KGH4 as seed ortholog is 100%.
Bootstrap support for E9IX18 as seed ortholog is 100%.

Group of orthologs #769. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 S.invicta:199

Q5KL20              	100.00%		E9J841              	100.00%
Bootstrap support for Q5KL20 as seed ortholog is 100%.
Bootstrap support for E9J841 as seed ortholog is 100%.

Group of orthologs #770. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:68 S.invicta:198

Q5K9E7              	100.00%		E9IJU5              	100.00%
Q5KEY5              	8.93%		
Bootstrap support for Q5K9E7 as seed ortholog is 94%.
Bootstrap support for E9IJU5 as seed ortholog is 100%.

Group of orthologs #771. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:53 S.invicta:106

Q5KIX3              	100.00%		E9IDG7              	100.00%
Bootstrap support for Q5KIX3 as seed ortholog is 86%.
Bootstrap support for E9IDG7 as seed ortholog is 99%.

Group of orthologs #772. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 S.invicta:198

Q5K8I5              	100.00%		E9IS29              	100.00%
Bootstrap support for Q5K8I5 as seed ortholog is 100%.
Bootstrap support for E9IS29 as seed ortholog is 100%.

Group of orthologs #773. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 S.invicta:198

Q5KIZ8              	100.00%		E9IIT5              	100.00%
Bootstrap support for Q5KIZ8 as seed ortholog is 100%.
Bootstrap support for E9IIT5 as seed ortholog is 100%.

Group of orthologs #774. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 S.invicta:198

Q5K8C0              	100.00%		E9IZU5              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for E9IZU5 as seed ortholog is 100%.

Group of orthologs #775. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 S.invicta:198

Q5KFM2              	100.00%		E9ITG6              	100.00%
Bootstrap support for Q5KFM2 as seed ortholog is 100%.
Bootstrap support for E9ITG6 as seed ortholog is 100%.

Group of orthologs #776. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 S.invicta:197

Q5KIE6              	100.00%		E9IFJ0              	100.00%
Bootstrap support for Q5KIE6 as seed ortholog is 100%.
Bootstrap support for E9IFJ0 as seed ortholog is 100%.

Group of orthologs #777. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 S.invicta:197

Q5KAB2              	100.00%		E9ISK9              	100.00%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for E9ISK9 as seed ortholog is 100%.

Group of orthologs #778. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 S.invicta:197

Q5K979              	100.00%		E9IV57              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for E9IV57 as seed ortholog is 100%.

Group of orthologs #779. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:64

Q5K7V1              	100.00%		E9J660              	100.00%
Bootstrap support for Q5K7V1 as seed ortholog is 90%.
Bootstrap support for E9J660 as seed ortholog is 95%.

Group of orthologs #780. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 S.invicta:197

Q5KB01              	100.00%		E9J520              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for E9J520 as seed ortholog is 100%.

Group of orthologs #781. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:58 S.invicta:73

Q5KQ09              	100.00%		E9J9N5              	100.00%
Q5KA14              	22.62%		E9J2L5              	18.10%
Q5KCH2              	22.19%		E9IGW0              	8.45%
Q5KJA6              	21.97%		
Q5KJA2              	21.64%		
Q5KCB5              	21.31%		
Q5KD25              	20.77%		
Q5KDS2              	19.56%		
Bootstrap support for Q5KQ09 as seed ortholog is 81%.
Bootstrap support for E9J9N5 as seed ortholog is 90%.

Group of orthologs #782. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 S.invicta:196

P0CN20              	100.00%		E9IGJ7              	100.00%
Bootstrap support for P0CN20 as seed ortholog is 100%.
Bootstrap support for E9IGJ7 as seed ortholog is 100%.

Group of orthologs #783. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 S.invicta:196

Q5KC10              	100.00%		E9IMQ8              	100.00%
Bootstrap support for Q5KC10 as seed ortholog is 100%.
Bootstrap support for E9IMQ8 as seed ortholog is 100%.

Group of orthologs #784. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 S.invicta:196

Q5KPX1              	100.00%		E9IE59              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for E9IE59 as seed ortholog is 100%.

Group of orthologs #785. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:195

Q5KGM3              	100.00%		E9I986              	100.00%
Bootstrap support for Q5KGM3 as seed ortholog is 99%.
Bootstrap support for E9I986 as seed ortholog is 100%.

Group of orthologs #786. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 S.invicta:131

Q5KKS4              	100.00%		E9IFL9              	100.00%
Bootstrap support for Q5KKS4 as seed ortholog is 100%.
Bootstrap support for E9IFL9 as seed ortholog is 99%.

Group of orthologs #787. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 S.invicta:126

P0CM54              	100.00%		E9J302              	100.00%
Bootstrap support for P0CM54 as seed ortholog is 100%.
Bootstrap support for E9J302 as seed ortholog is 100%.

Group of orthologs #788. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:35 S.invicta:79

Q5KF72              	100.00%		E9J781              	100.00%
Bootstrap support for Q5KF72 as seed ortholog is 94%.
Bootstrap support for E9J781 as seed ortholog is 99%.

Group of orthologs #789. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 S.invicta:194

Q5KM78              	100.00%		E9J4T5              	100.00%
Q5KCL1              	12.63%		
Bootstrap support for Q5KM78 as seed ortholog is 100%.
Bootstrap support for E9J4T5 as seed ortholog is 100%.

Group of orthologs #790. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 S.invicta:194

P0CO06              	100.00%		E9IFJ4              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for E9IFJ4 as seed ortholog is 100%.

Group of orthologs #791. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:55 S.invicta:59

Q5K818              	100.00%		E9IES4              	100.00%
Bootstrap support for Q5K818 as seed ortholog is 98%.
Bootstrap support for E9IES4 as seed ortholog is 99%.

Group of orthologs #792. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 S.invicta:194

Q5KND0              	100.00%		E9IAZ1              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for E9IAZ1 as seed ortholog is 100%.

Group of orthologs #793. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:99 S.invicta:5

Q5KAX2              	100.00%		E9IKM9              	100.00%
Q5KG95              	12.57%		
Bootstrap support for Q5KAX2 as seed ortholog is 99%.
Bootstrap support for E9IKM9 as seed ortholog is 44%.
Alternative seed ortholog is E9J286 (5 bits away from this cluster)

Group of orthologs #794. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:193

Q5KIE0              	100.00%		E9IAK2              	100.00%
Bootstrap support for Q5KIE0 as seed ortholog is 100%.
Bootstrap support for E9IAK2 as seed ortholog is 100%.

Group of orthologs #795. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:60 S.invicta:193

Q5KJG5              	100.00%		E9IBS2              	100.00%
Bootstrap support for Q5KJG5 as seed ortholog is 92%.
Bootstrap support for E9IBS2 as seed ortholog is 100%.

Group of orthologs #796. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:193

Q5KHA1              	100.00%		E9IJZ3              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for E9IJZ3 as seed ortholog is 100%.

Group of orthologs #797. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:1

Q5KG79              	100.00%		E9IVZ0              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 100%.
Bootstrap support for E9IVZ0 as seed ortholog is 46%.
Alternative seed ortholog is E9IMN3 (1 bits away from this cluster)

Group of orthologs #798. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:193

Q5KGW5              	100.00%		E9J3Z9              	100.00%
Bootstrap support for Q5KGW5 as seed ortholog is 100%.
Bootstrap support for E9J3Z9 as seed ortholog is 100%.

Group of orthologs #799. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:193

Q5KNF9              	100.00%		E9J739              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for E9J739 as seed ortholog is 100%.

Group of orthologs #800. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 S.invicta:193

Q5KPJ7              	100.00%		E9JCU3              	100.00%
Bootstrap support for Q5KPJ7 as seed ortholog is 100%.
Bootstrap support for E9JCU3 as seed ortholog is 100%.

Group of orthologs #801. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 S.invicta:192

P0CO62              	100.00%		E9IIV7              	100.00%
Bootstrap support for P0CO62 as seed ortholog is 100%.
Bootstrap support for E9IIV7 as seed ortholog is 100%.

Group of orthologs #802. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 S.invicta:192

Q5KGY1              	100.00%		E9IV28              	100.00%
Bootstrap support for Q5KGY1 as seed ortholog is 100%.
Bootstrap support for E9IV28 as seed ortholog is 100%.

Group of orthologs #803. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 S.invicta:192

Q5KPF3              	100.00%		E9IQQ1              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for E9IQQ1 as seed ortholog is 100%.

Group of orthologs #804. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 S.invicta:192

Q5K8H7              	100.00%		E9JBD3              	100.00%
Bootstrap support for Q5K8H7 as seed ortholog is 100%.
Bootstrap support for E9JBD3 as seed ortholog is 100%.

Group of orthologs #805. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 S.invicta:191

Q5KLQ4              	100.00%		E9J2Z6              	100.00%
Q5KLR2              	51.60%		
Bootstrap support for Q5KLQ4 as seed ortholog is 100%.
Bootstrap support for E9J2Z6 as seed ortholog is 100%.

Group of orthologs #806. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 S.invicta:191

Q5KAZ2              	100.00%		E9ICB0              	100.00%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for E9ICB0 as seed ortholog is 100%.

Group of orthologs #807. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 S.invicta:191

P0CR48              	100.00%		E9IN43              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for E9IN43 as seed ortholog is 100%.

Group of orthologs #808. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:110

Q5KDR7              	100.00%		E9IHL8              	100.00%
Bootstrap support for Q5KDR7 as seed ortholog is 99%.
Bootstrap support for E9IHL8 as seed ortholog is 99%.

Group of orthologs #809. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 S.invicta:191

Q5KHT0              	100.00%		E9IJD5              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for E9IJD5 as seed ortholog is 100%.

Group of orthologs #810. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 S.invicta:191

Q5KNH2              	100.00%		E9J9H0              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for E9J9H0 as seed ortholog is 100%.

Group of orthologs #811. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:58 S.invicta:106

P0CN98              	100.00%		E9IYU3              	100.00%
                    	       		E9IU71              	98.08%
                    	       		E9IUX7              	63.46%
Bootstrap support for P0CN98 as seed ortholog is 99%.
Bootstrap support for E9IYU3 as seed ortholog is 100%.

Group of orthologs #812. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 S.invicta:189

Q5KJ16              	100.00%		E9IME5              	100.00%
Bootstrap support for Q5KJ16 as seed ortholog is 100%.
Bootstrap support for E9IME5 as seed ortholog is 100%.

Group of orthologs #813. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 S.invicta:189

Q5KL97              	100.00%		E9IZB1              	100.00%
Bootstrap support for Q5KL97 as seed ortholog is 100%.
Bootstrap support for E9IZB1 as seed ortholog is 100%.

Group of orthologs #814. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:59

Q5KLR5              	100.00%		E9J4D0              	100.00%
Q5K808              	28.69%		
Bootstrap support for Q5KLR5 as seed ortholog is 100%.
Bootstrap support for E9J4D0 as seed ortholog is 91%.

Group of orthologs #815. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:188

Q5K8L4              	100.00%		E9IAE6              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for E9IAE6 as seed ortholog is 100%.

Group of orthologs #816. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:188

Q5KBH4              	100.00%		E9IEP5              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for E9IEP5 as seed ortholog is 100%.

Group of orthologs #817. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:188

Q5K7W8              	100.00%		E9IQB6              	100.00%
Bootstrap support for Q5K7W8 as seed ortholog is 100%.
Bootstrap support for E9IQB6 as seed ortholog is 100%.

Group of orthologs #818. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:188

Q5KD38              	100.00%		E9IW45              	100.00%
Bootstrap support for Q5KD38 as seed ortholog is 100%.
Bootstrap support for E9IW45 as seed ortholog is 100%.

Group of orthologs #819. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:188

Q5KF53              	100.00%		E9IWY4              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for E9IWY4 as seed ortholog is 100%.

Group of orthologs #820. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:188

P0CM80              	100.00%		E9J7W7              	100.00%
Bootstrap support for P0CM80 as seed ortholog is 100%.
Bootstrap support for E9J7W7 as seed ortholog is 100%.

Group of orthologs #821. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 S.invicta:82

Q5KJK0              	100.00%		E9JAN1              	100.00%
Bootstrap support for Q5KJK0 as seed ortholog is 100%.
Bootstrap support for E9JAN1 as seed ortholog is 100%.

Group of orthologs #822. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:187

Q5KN70              	100.00%		E9IBW3              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 97%.
Bootstrap support for E9IBW3 as seed ortholog is 100%.

Group of orthologs #823. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 S.invicta:187

Q5KL10              	100.00%		E9ILT1              	100.00%
Bootstrap support for Q5KL10 as seed ortholog is 100%.
Bootstrap support for E9ILT1 as seed ortholog is 100%.

Group of orthologs #824. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 S.invicta:187

Q5KKW8              	100.00%		E9J9I3              	100.00%
Bootstrap support for Q5KKW8 as seed ortholog is 100%.
Bootstrap support for E9J9I3 as seed ortholog is 100%.

Group of orthologs #825. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 S.invicta:186

Q5KAJ6              	100.00%		E9IHB6              	100.00%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for E9IHB6 as seed ortholog is 100%.

Group of orthologs #826. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:186

Q5KFP2              	100.00%		E9IJS5              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 100%.
Bootstrap support for E9IJS5 as seed ortholog is 100%.

Group of orthologs #827. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 S.invicta:186

Q5KN51              	100.00%		E9IJA7              	100.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for E9IJA7 as seed ortholog is 100%.

Group of orthologs #828. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:186

Q5KGB2              	100.00%		E9J8P3              	100.00%
Bootstrap support for Q5KGB2 as seed ortholog is 99%.
Bootstrap support for E9J8P3 as seed ortholog is 100%.

Group of orthologs #829. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 S.invicta:118

Q5KIL7              	100.00%		E9JCN1              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for E9JCN1 as seed ortholog is 99%.

Group of orthologs #830. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:185

Q5KAI5              	100.00%		E9IGW6              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for E9IGW6 as seed ortholog is 100%.

Group of orthologs #831. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:185

Q5KJC9              	100.00%		E9ICX6              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for E9ICX6 as seed ortholog is 100%.

Group of orthologs #832. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:71

Q5K9B8              	100.00%		E9ISM4              	100.00%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for E9ISM4 as seed ortholog is 97%.

Group of orthologs #833. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:185

Q5KC49              	100.00%		E9IUX6              	100.00%
Bootstrap support for Q5KC49 as seed ortholog is 100%.
Bootstrap support for E9IUX6 as seed ortholog is 100%.

Group of orthologs #834. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:185

Q5KKD1              	100.00%		E9J1S6              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for E9J1S6 as seed ortholog is 100%.

Group of orthologs #835. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:185

Q5KPF9              	100.00%		E9IZM3              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for E9IZM3 as seed ortholog is 100%.

Group of orthologs #836. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 S.invicta:185

Q5KM68              	100.00%		E9J6A4              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for E9J6A4 as seed ortholog is 100%.

Group of orthologs #837. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KCD2              	100.00%		E9J2W6              	100.00%
                    	       		E9INQ2              	9.72%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for E9J2W6 as seed ortholog is 100%.

Group of orthologs #838. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KD00              	100.00%		E9IIJ2              	100.00%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for E9IIJ2 as seed ortholog is 100%.

Group of orthologs #839. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KL89              	100.00%		E9II53              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for E9II53 as seed ortholog is 100%.

Group of orthologs #840. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KI08              	100.00%		E9IP04              	100.00%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for E9IP04 as seed ortholog is 100%.

Group of orthologs #841. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:95 S.invicta:108

Q5KI70              	100.00%		E9IQT4              	100.00%
Bootstrap support for Q5KI70 as seed ortholog is 99%.
Bootstrap support for E9IQT4 as seed ortholog is 100%.

Group of orthologs #842. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KHZ6              	100.00%		E9IUC2              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for E9IUC2 as seed ortholog is 100%.

Group of orthologs #843. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KIZ3              	100.00%		E9J438              	100.00%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for E9J438 as seed ortholog is 100%.

Group of orthologs #844. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KP07              	100.00%		E9IZN2              	100.00%
Bootstrap support for Q5KP07 as seed ortholog is 100%.
Bootstrap support for E9IZN2 as seed ortholog is 100%.

Group of orthologs #845. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 S.invicta:184

Q5KFR3              	100.00%		E9JDH8              	100.00%
Bootstrap support for Q5KFR3 as seed ortholog is 100%.
Bootstrap support for E9JDH8 as seed ortholog is 100%.

Group of orthologs #846. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 S.invicta:183

Q5KGZ7              	100.00%		E9IQ38              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for E9IQ38 as seed ortholog is 100%.

Group of orthologs #847. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 S.invicta:183

Q5KC13              	100.00%		E9J363              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for E9J363 as seed ortholog is 100%.

Group of orthologs #848. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:129

Q5KLT0              	100.00%		E9IPJ4              	100.00%
Bootstrap support for Q5KLT0 as seed ortholog is 99%.
Bootstrap support for E9IPJ4 as seed ortholog is 99%.

Group of orthologs #849. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:26 S.invicta:57

Q5KMZ2              	100.00%		E9J4B0              	100.00%
Q5KC79              	100.00%		E9IQR3              	100.00%
Q5KKB7              	100.00%		E9IQR5              	29.00%
Q5KGQ4              	78.56%		E9IK55              	19.17%
Q5K8W0              	75.05%		E9IVK0              	16.14%
Q5KD28              	59.45%		E9J2F8              	15.31%
Q5KCC5              	24.13%		E9IHY7              	15.17%
Q5K6S8              	23.70%		E9IVK2              	14.21%
Q5KA16              	20.43%		E9IVK1              	12.69%
Q5KKF1              	7.60%		E9ISX3              	12.28%
Q5KHG7              	7.50%		E9IUU1              	11.59%
Q5KM76              	7.11%		E9ICR4              	7.45%
Q5K7D3              	7.01%		E9IP27              	5.93%
Q5KKT2              	6.61%		E9IP28              	5.83%
Q5K996              	6.41%		E9IK21              	5.58%
Q5KC74              	6.01%		
Q5KCB9              	5.51%		
Bootstrap support for Q5KMZ2 as seed ortholog is 70%.
Alternative seed ortholog is Q5KLV0 (26 bits away from this cluster)
Bootstrap support for Q5KC79 as seed ortholog is 73%.
Alternative seed ortholog is Q5KLV0 (26 bits away from this cluster)
Bootstrap support for Q5KKB7 as seed ortholog is 70%.
Alternative seed ortholog is Q5KLV0 (26 bits away from this cluster)
Bootstrap support for E9J4B0 as seed ortholog is 88%.
Bootstrap support for E9IQR3 as seed ortholog is 85%.

Group of orthologs #850. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 S.invicta:181

Q5KAM4              	100.00%		E9J2S2              	100.00%
                    	       		E9IA00              	50.25%
                    	       		E9J242              	44.42%
                    	       		E9IYP9              	30.84%
                    	       		E9JBH1              	26.27%
                    	       		E9IIA9              	11.93%
                    	       		E9IF04              	9.64%
Bootstrap support for Q5KAM4 as seed ortholog is 100%.
Bootstrap support for E9J2S2 as seed ortholog is 100%.

Group of orthologs #851. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 S.invicta:181

Q5KER8              	100.00%		E9ISK8              	100.00%
Q5KGW3              	17.28%		
Bootstrap support for Q5KER8 as seed ortholog is 100%.
Bootstrap support for E9ISK8 as seed ortholog is 100%.

Group of orthologs #852. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 S.invicta:181

Q5KK51              	100.00%		E9ILL0              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for E9ILL0 as seed ortholog is 100%.

Group of orthologs #853. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 S.invicta:181

Q5KQ70              	100.00%		E9IZD2              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for E9IZD2 as seed ortholog is 100%.

Group of orthologs #854. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:116

Q5KLA5              	100.00%		E9J837              	100.00%
Bootstrap support for Q5KLA5 as seed ortholog is 99%.
Bootstrap support for E9J837 as seed ortholog is 99%.

Group of orthologs #855. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5KGR3              	100.00%		E9INB0              	100.00%
                    	       		E9IPL1              	60.83%
                    	       		E9ICM6              	32.05%
                    	       		E9IJU9              	8.75%
Bootstrap support for Q5KGR3 as seed ortholog is 100%.
Bootstrap support for E9INB0 as seed ortholog is 100%.

Group of orthologs #856. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5K850              	100.00%		E9IA08              	100.00%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for E9IA08 as seed ortholog is 100%.

Group of orthologs #857. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5KL66              	100.00%		E9IDB9              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for E9IDB9 as seed ortholog is 100%.

Group of orthologs #858. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5KPB3              	100.00%		E9IBX0              	100.00%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for E9IBX0 as seed ortholog is 100%.

Group of orthologs #859. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5KBC4              	100.00%		E9IST7              	100.00%
Bootstrap support for Q5KBC4 as seed ortholog is 100%.
Bootstrap support for E9IST7 as seed ortholog is 100%.

Group of orthologs #860. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5KAL7              	100.00%		E9JAR8              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for E9JAR8 as seed ortholog is 100%.

Group of orthologs #861. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 S.invicta:180

Q5KMV8              	100.00%		E9J4Y1              	100.00%
Bootstrap support for Q5KMV8 as seed ortholog is 100%.
Bootstrap support for E9J4Y1 as seed ortholog is 100%.

Group of orthologs #862. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 S.invicta:107

P0CO86              	100.00%		E9IB52              	100.00%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for E9IB52 as seed ortholog is 99%.

Group of orthologs #863. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 S.invicta:179

Q5KKW5              	100.00%		E9I9P9              	100.00%
Bootstrap support for Q5KKW5 as seed ortholog is 100%.
Bootstrap support for E9I9P9 as seed ortholog is 100%.

Group of orthologs #864. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 S.invicta:179

Q5KJJ9              	100.00%		E9IBH8              	100.00%
Bootstrap support for Q5KJJ9 as seed ortholog is 100%.
Bootstrap support for E9IBH8 as seed ortholog is 100%.

Group of orthologs #865. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:32 S.invicta:179

Q5KKJ8              	100.00%		E9IIB4              	100.00%
Bootstrap support for Q5KKJ8 as seed ortholog is 82%.
Bootstrap support for E9IIB4 as seed ortholog is 100%.

Group of orthologs #866. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 S.invicta:85

Q5KHZ1              	100.00%		E9IML8              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for E9IML8 as seed ortholog is 99%.

Group of orthologs #867. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 S.invicta:178

Q5K7G5              	100.00%		E9IEU7              	100.00%
                    	       		E9JD42              	13.17%
Bootstrap support for Q5K7G5 as seed ortholog is 100%.
Bootstrap support for E9IEU7 as seed ortholog is 100%.

Group of orthologs #868. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 S.invicta:178

Q5KHZ3              	100.00%		E9JAY9              	100.00%
Bootstrap support for Q5KHZ3 as seed ortholog is 100%.
Bootstrap support for E9JAY9 as seed ortholog is 100%.

Group of orthologs #869. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 S.invicta:177

Q5K7R1              	100.00%		E9IBA8              	100.00%
Bootstrap support for Q5K7R1 as seed ortholog is 100%.
Bootstrap support for E9IBA8 as seed ortholog is 100%.

Group of orthologs #870. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 S.invicta:177

Q5KFF7              	100.00%		E9IAM5              	100.00%
Bootstrap support for Q5KFF7 as seed ortholog is 100%.
Bootstrap support for E9IAM5 as seed ortholog is 100%.

Group of orthologs #871. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 S.invicta:177

Q5K8H3              	100.00%		E9IIG2              	100.00%
Bootstrap support for Q5K8H3 as seed ortholog is 100%.
Bootstrap support for E9IIG2 as seed ortholog is 100%.

Group of orthologs #872. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 S.invicta:177

Q5KDF8              	100.00%		E9IT22              	100.00%
Bootstrap support for Q5KDF8 as seed ortholog is 100%.
Bootstrap support for E9IT22 as seed ortholog is 100%.

Group of orthologs #873. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 S.invicta:177

Q5KJT1              	100.00%		E9ISP1              	100.00%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for E9ISP1 as seed ortholog is 100%.

Group of orthologs #874. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 S.invicta:176

Q5K844              	100.00%		E9IBG5              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for E9IBG5 as seed ortholog is 100%.

Group of orthologs #875. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 S.invicta:176

Q5KPT7              	100.00%		E9IHE7              	100.00%
Bootstrap support for Q5KPT7 as seed ortholog is 100%.
Bootstrap support for E9IHE7 as seed ortholog is 100%.

Group of orthologs #876. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 S.invicta:176

Q5KLP4              	100.00%		E9IM12              	100.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for E9IM12 as seed ortholog is 100%.

Group of orthologs #877. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:100

Q5K756              	100.00%		E9I9J8              	100.00%
Q5KM34              	18.38%		
Bootstrap support for Q5K756 as seed ortholog is 99%.
Bootstrap support for E9I9J8 as seed ortholog is 99%.

Group of orthologs #878. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:175

P0CO36              	100.00%		E9IEE3              	100.00%
Bootstrap support for P0CO36 as seed ortholog is 100%.
Bootstrap support for E9IEE3 as seed ortholog is 100%.

Group of orthologs #879. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:78 S.invicta:103

P0CS30              	100.00%		E9IGK1              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 95%.
Bootstrap support for E9IGK1 as seed ortholog is 97%.

Group of orthologs #880. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:14

Q5K9Z8              	100.00%		E9IID8              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 100%.
Bootstrap support for E9IID8 as seed ortholog is 66%.
Alternative seed ortholog is E9IJP5 (14 bits away from this cluster)

Group of orthologs #881. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:175

Q5KB61              	100.00%		E9J1W8              	100.00%
Bootstrap support for Q5KB61 as seed ortholog is 100%.
Bootstrap support for E9J1W8 as seed ortholog is 100%.

Group of orthologs #882. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:175

Q5KD57              	100.00%		E9J060              	100.00%
Bootstrap support for Q5KD57 as seed ortholog is 100%.
Bootstrap support for E9J060 as seed ortholog is 100%.

Group of orthologs #883. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 S.invicta:126

Q5KMT0              	100.00%		E9IRI6              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for E9IRI6 as seed ortholog is 99%.

Group of orthologs #884. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:31

Q5KAW2              	100.00%		E9ILD9              	100.00%
Bootstrap support for Q5KAW2 as seed ortholog is 99%.
Bootstrap support for E9ILD9 as seed ortholog is 79%.

Group of orthologs #885. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:174

Q5KF20              	100.00%		E9J9M1              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 99%.
Bootstrap support for E9J9M1 as seed ortholog is 100%.

Group of orthologs #886. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 S.invicta:174

Q5KPS6              	100.00%		E9J589              	100.00%
Bootstrap support for Q5KPS6 as seed ortholog is 100%.
Bootstrap support for E9J589 as seed ortholog is 100%.

Group of orthologs #887. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 S.invicta:173

Q5KH36              	100.00%		E9J326              	100.00%
                    	       		E9J8L4              	24.94%
                    	       		E9J009              	23.33%
Bootstrap support for Q5KH36 as seed ortholog is 100%.
Bootstrap support for E9J326 as seed ortholog is 100%.

Group of orthologs #888. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:127 S.invicta:173

P0CQ12              	100.00%		E9IB35              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for E9IB35 as seed ortholog is 100%.

Group of orthologs #889. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 S.invicta:173

Q5KA01              	100.00%		E9I8J2              	100.00%
Bootstrap support for Q5KA01 as seed ortholog is 100%.
Bootstrap support for E9I8J2 as seed ortholog is 100%.

Group of orthologs #890. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 S.invicta:173

Q5KJN1              	100.00%		E9INE7              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for E9INE7 as seed ortholog is 100%.

Group of orthologs #891. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 S.invicta:173

Q5KJ08              	100.00%		E9IW66              	100.00%
Bootstrap support for Q5KJ08 as seed ortholog is 100%.
Bootstrap support for E9IW66 as seed ortholog is 100%.

Group of orthologs #892. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 S.invicta:173

Q5K8I0              	100.00%		E9J835              	100.00%
Bootstrap support for Q5K8I0 as seed ortholog is 100%.
Bootstrap support for E9J835 as seed ortholog is 100%.

Group of orthologs #893. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 S.invicta:173

Q5KAX8              	100.00%		E9J745              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for E9J745 as seed ortholog is 100%.

Group of orthologs #894. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:173

Q5KP45              	100.00%		E9J3S1              	100.00%
Bootstrap support for Q5KP45 as seed ortholog is 99%.
Bootstrap support for E9J3S1 as seed ortholog is 100%.

Group of orthologs #895. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 S.invicta:172

Q5KGJ8              	100.00%		E9IDD6              	100.00%
Bootstrap support for Q5KGJ8 as seed ortholog is 100%.
Bootstrap support for E9IDD6 as seed ortholog is 100%.

Group of orthologs #896. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 S.invicta:172

P0CM26              	100.00%		E9IWT8              	100.00%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for E9IWT8 as seed ortholog is 100%.

Group of orthologs #897. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:78 S.invicta:43

Q5KD66              	100.00%		E9IZK0              	100.00%
Bootstrap support for Q5KD66 as seed ortholog is 97%.
Bootstrap support for E9IZK0 as seed ortholog is 87%.

Group of orthologs #898. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 S.invicta:172

Q5K8W6              	100.00%		E9J5Y7              	100.00%
Bootstrap support for Q5K8W6 as seed ortholog is 100%.
Bootstrap support for E9J5Y7 as seed ortholog is 100%.

Group of orthologs #899. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 S.invicta:171

Q5KCU5              	100.00%		E9IA29              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for E9IA29 as seed ortholog is 100%.

Group of orthologs #900. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 S.invicta:171

Q5KIU7              	100.00%		E9IM07              	100.00%
Bootstrap support for Q5KIU7 as seed ortholog is 100%.
Bootstrap support for E9IM07 as seed ortholog is 100%.

Group of orthologs #901. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 S.invicta:171

Q5KF34              	100.00%		E9J498              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for E9J498 as seed ortholog is 100%.

Group of orthologs #902. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 S.invicta:171

Q5KGM8              	100.00%		E9JDA7              	100.00%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for E9JDA7 as seed ortholog is 100%.

Group of orthologs #903. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:72 S.invicta:20

Q5KDK0              	100.00%		E9ID72              	100.00%
Bootstrap support for Q5KDK0 as seed ortholog is 93%.
Bootstrap support for E9ID72 as seed ortholog is 85%.

Group of orthologs #904. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 S.invicta:170

P0CO14              	100.00%		E9J386              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for E9J386 as seed ortholog is 100%.

Group of orthologs #905. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 S.invicta:29

Q5K721              	100.00%		E9J377              	100.00%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for E9J377 as seed ortholog is 26%.
Alternative seed ortholog is E9IHK3 (29 bits away from this cluster)

Group of orthologs #906. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:169

P0CO02              	100.00%		E9IGQ6              	100.00%
                    	       		E9IU72              	98.55%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for E9IGQ6 as seed ortholog is 100%.

Group of orthologs #907. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:169

Q5K9P5              	100.00%		E9IAS9              	100.00%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for E9IAS9 as seed ortholog is 100%.

Group of orthologs #908. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:70

P0CL94              	100.00%		E9IUQ3              	100.00%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for E9IUQ3 as seed ortholog is 97%.

Group of orthologs #909. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:169

Q5KCQ4              	100.00%		E9IPQ1              	100.00%
Bootstrap support for Q5KCQ4 as seed ortholog is 100%.
Bootstrap support for E9IPQ1 as seed ortholog is 100%.

Group of orthologs #910. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:169

Q5KFF3              	100.00%		E9IQ81              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for E9IQ81 as seed ortholog is 100%.

Group of orthologs #911. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:112

P0CS50              	100.00%		E9J690              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 100%.
Bootstrap support for E9J690 as seed ortholog is 99%.

Group of orthologs #912. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:56 S.invicta:99

Q5KLH7              	100.00%		E9J464              	100.00%
Bootstrap support for Q5KLH7 as seed ortholog is 99%.
Bootstrap support for E9J464 as seed ortholog is 99%.

Group of orthologs #913. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 S.invicta:169

Q5KCI8              	100.00%		E9JCX7              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for E9JCX7 as seed ortholog is 100%.

Group of orthologs #914. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 S.invicta:168

Q5KNK4              	100.00%		E9ID66              	100.00%
Bootstrap support for Q5KNK4 as seed ortholog is 100%.
Bootstrap support for E9ID66 as seed ortholog is 100%.

Group of orthologs #915. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 S.invicta:168

Q5KK68              	100.00%		E9ILD1              	100.00%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for E9ILD1 as seed ortholog is 100%.

Group of orthologs #916. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 S.invicta:168

Q5KD06              	100.00%		E9J3J5              	100.00%
Bootstrap support for Q5KD06 as seed ortholog is 100%.
Bootstrap support for E9J3J5 as seed ortholog is 100%.

Group of orthologs #917. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 S.invicta:100

P0CQ06              	100.00%		E9IMH4              	100.00%
Bootstrap support for P0CQ06 as seed ortholog is 100%.
Bootstrap support for E9IMH4 as seed ortholog is 98%.

Group of orthologs #918. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:50 S.invicta:167

Q5KFS7              	100.00%		E9J2Y0              	100.00%
Bootstrap support for Q5KFS7 as seed ortholog is 95%.
Bootstrap support for E9J2Y0 as seed ortholog is 100%.

Group of orthologs #919. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:50 S.invicta:96

Q5K6W6              	100.00%		E9IS22              	100.00%
                    	       		E9J361              	71.61%
                    	       		E9J8J4              	21.15%
Bootstrap support for Q5K6W6 as seed ortholog is 99%.
Bootstrap support for E9IS22 as seed ortholog is 100%.

Group of orthologs #920. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:106

P0CR34              	100.00%		E9IW58              	100.00%
Bootstrap support for P0CR34 as seed ortholog is 99%.
Bootstrap support for E9IW58 as seed ortholog is 99%.

Group of orthologs #921. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:54 S.invicta:23

Q5KNZ3              	100.00%		E9IGN5              	100.00%
Bootstrap support for Q5KNZ3 as seed ortholog is 97%.
Bootstrap support for E9IGN5 as seed ortholog is 77%.

Group of orthologs #922. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:95 S.invicta:90

Q5KNK6              	100.00%		E9IUG3              	100.00%
Bootstrap support for Q5KNK6 as seed ortholog is 98%.
Bootstrap support for E9IUG3 as seed ortholog is 99%.

Group of orthologs #923. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 S.invicta:166

Q5K9V0              	100.00%		E9JDE2              	100.00%
Bootstrap support for Q5K9V0 as seed ortholog is 100%.
Bootstrap support for E9JDE2 as seed ortholog is 100%.

Group of orthologs #924. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 S.invicta:115

Q5KE51              	100.00%		E9JBG4              	100.00%
                    	       		E9I9P7              	9.10%
Bootstrap support for Q5KE51 as seed ortholog is 100%.
Bootstrap support for E9JBG4 as seed ortholog is 99%.

Group of orthologs #925. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 S.invicta:165

Q5KGQ8              	100.00%		E9IEA9              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for E9IEA9 as seed ortholog is 100%.

Group of orthologs #926. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 S.invicta:165

Q5KKY5              	100.00%		E9IDH6              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for E9IDH6 as seed ortholog is 100%.

Group of orthologs #927. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 S.invicta:165

Q5KH16              	100.00%		E9IIH6              	100.00%
Bootstrap support for Q5KH16 as seed ortholog is 100%.
Bootstrap support for E9IIH6 as seed ortholog is 100%.

Group of orthologs #928. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 S.invicta:165

Q5KLA9              	100.00%		E9J4S8              	100.00%
Bootstrap support for Q5KLA9 as seed ortholog is 100%.
Bootstrap support for E9J4S8 as seed ortholog is 100%.

Group of orthologs #929. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:165

Q5KLT5              	100.00%		E9JA75              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 99%.
Bootstrap support for E9JA75 as seed ortholog is 100%.

Group of orthologs #930. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 S.invicta:164

Q5KLL8              	100.00%		E9J3S9              	100.00%
Bootstrap support for Q5KLL8 as seed ortholog is 100%.
Bootstrap support for E9J3S9 as seed ortholog is 100%.

Group of orthologs #931. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:99 S.invicta:17

Q5KA58              	100.00%		E9J4X4              	100.00%
                    	       		E9IFM8              	8.92%
Bootstrap support for Q5KA58 as seed ortholog is 96%.
Bootstrap support for E9J4X4 as seed ortholog is 59%.
Alternative seed ortholog is E9IP07 (17 bits away from this cluster)

Group of orthologs #932. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 S.invicta:163

Q5KFS4              	100.00%		E9ILS8              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for E9ILS8 as seed ortholog is 100%.

Group of orthologs #933. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 S.invicta:163

Q5KB12              	100.00%		E9JB91              	100.00%
Bootstrap support for Q5KB12 as seed ortholog is 100%.
Bootstrap support for E9JB91 as seed ortholog is 100%.

Group of orthologs #934. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 S.invicta:106

Q5KKX5              	100.00%		E9J3D4              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for E9J3D4 as seed ortholog is 99%.

Group of orthologs #935. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:46

Q5KLY1              	100.00%		E9J2U3              	100.00%
Bootstrap support for Q5KLY1 as seed ortholog is 93%.
Bootstrap support for E9J2U3 as seed ortholog is 98%.

Group of orthologs #936. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 S.invicta:163

Q5KJX3              	100.00%		E9JD33              	100.00%
Bootstrap support for Q5KJX3 as seed ortholog is 100%.
Bootstrap support for E9JD33 as seed ortholog is 100%.

Group of orthologs #937. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 S.invicta:163

Q5KKV3              	100.00%		E9JD87              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for E9JD87 as seed ortholog is 100%.

Group of orthologs #938. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 S.invicta:162

Q5KJL6              	100.00%		E9IH81              	100.00%
                    	       		E9IUW6              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for E9IH81 as seed ortholog is 100%.
Bootstrap support for E9IUW6 as seed ortholog is 100%.

Group of orthologs #939. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 S.invicta:162

Q5KG66              	100.00%		E9II66              	100.00%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for E9II66 as seed ortholog is 100%.

Group of orthologs #940. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 S.invicta:161

Q5KEW0              	100.00%		E9IE66              	100.00%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for E9IE66 as seed ortholog is 100%.

Group of orthologs #941. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 S.invicta:161

Q5KIX0              	100.00%		E9IBV7              	100.00%
Bootstrap support for Q5KIX0 as seed ortholog is 100%.
Bootstrap support for E9IBV7 as seed ortholog is 100%.

Group of orthologs #942. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:60 S.invicta:74

Q5KNW3              	100.00%		E9ID55              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 97%.
Bootstrap support for E9ID55 as seed ortholog is 99%.

Group of orthologs #943. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 S.invicta:84

Q5KQ08              	100.00%		E9IAX5              	100.00%
Bootstrap support for Q5KQ08 as seed ortholog is 100%.
Bootstrap support for E9IAX5 as seed ortholog is 98%.

Group of orthologs #944. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 S.invicta:160

Q5KMC2              	100.00%		E9IS47              	100.00%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for E9IS47 as seed ortholog is 100%.

Group of orthologs #945. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 S.invicta:159

P0CN80              	100.00%		E9IA79              	100.00%
Bootstrap support for P0CN80 as seed ortholog is 100%.
Bootstrap support for E9IA79 as seed ortholog is 100%.

Group of orthologs #946. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 S.invicta:159

P0CN52              	100.00%		E9IPX0              	100.00%
Bootstrap support for P0CN52 as seed ortholog is 100%.
Bootstrap support for E9IPX0 as seed ortholog is 100%.

Group of orthologs #947. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 S.invicta:159

Q5KLL5              	100.00%		E9INW1              	100.00%
Bootstrap support for Q5KLL5 as seed ortholog is 100%.
Bootstrap support for E9INW1 as seed ortholog is 100%.

Group of orthologs #948. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 S.invicta:159

Q5KEQ0              	100.00%		E9J1N8              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for E9J1N8 as seed ortholog is 100%.

Group of orthologs #949. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 S.invicta:158

Q5KBE4              	100.00%		E9IYK0              	100.00%
Bootstrap support for Q5KBE4 as seed ortholog is 100%.
Bootstrap support for E9IYK0 as seed ortholog is 100%.

Group of orthologs #950. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:158

Q5KC60              	100.00%		E9J015              	100.00%
Bootstrap support for Q5KC60 as seed ortholog is 100%.
Bootstrap support for E9J015 as seed ortholog is 100%.

Group of orthologs #951. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 S.invicta:158

Q5KK73              	100.00%		E9IWH3              	100.00%
Bootstrap support for Q5KK73 as seed ortholog is 100%.
Bootstrap support for E9IWH3 as seed ortholog is 100%.

Group of orthologs #952. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:36 S.invicta:55

Q5KDX1              	100.00%		E9IKJ3              	100.00%
Bootstrap support for Q5KDX1 as seed ortholog is 92%.
Bootstrap support for E9IKJ3 as seed ortholog is 53%.
Alternative seed ortholog is E9IMV9 (55 bits away from this cluster)

Group of orthologs #953. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 S.invicta:157

P0CS66              	100.00%		E9JD72              	100.00%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for E9JD72 as seed ortholog is 100%.

Group of orthologs #954. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 S.invicta:157

Q5KIJ6              	100.00%		E9J2K1              	100.00%
Bootstrap support for Q5KIJ6 as seed ortholog is 100%.
Bootstrap support for E9J2K1 as seed ortholog is 100%.

Group of orthologs #955. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 S.invicta:157

Q5KK70              	100.00%		E9J7U2              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for E9J7U2 as seed ortholog is 100%.

Group of orthologs #956. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:55 S.invicta:8

Q5KJH5              	100.00%		E9IAY9              	100.00%
Bootstrap support for Q5KJH5 as seed ortholog is 93%.
Bootstrap support for E9IAY9 as seed ortholog is 41%.
Alternative seed ortholog is E9JCV5 (8 bits away from this cluster)

Group of orthologs #957. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:113 S.invicta:156

Q5KED8              	100.00%		E9IWV7              	100.00%
Bootstrap support for Q5KED8 as seed ortholog is 99%.
Bootstrap support for E9IWV7 as seed ortholog is 100%.

Group of orthologs #958. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 S.invicta:156

Q5KHY4              	100.00%		E9J0H6              	100.00%
Bootstrap support for Q5KHY4 as seed ortholog is 100%.
Bootstrap support for E9J0H6 as seed ortholog is 100%.

Group of orthologs #959. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:96 S.invicta:101

Q5KDH4              	100.00%		E9J587              	100.00%
Bootstrap support for Q5KDH4 as seed ortholog is 98%.
Bootstrap support for E9J587 as seed ortholog is 99%.

Group of orthologs #960. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:60

Q5KES1              	100.00%		E9IIR2              	100.00%
                    	       		E9J4Z0              	23.80%
                    	       		E9IJM4              	15.00%
Bootstrap support for Q5KES1 as seed ortholog is 96%.
Bootstrap support for E9IIR2 as seed ortholog is 91%.

Group of orthologs #961. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 S.invicta:155

Q5K710              	100.00%		E9IEG1              	100.00%
Bootstrap support for Q5K710 as seed ortholog is 100%.
Bootstrap support for E9IEG1 as seed ortholog is 100%.

Group of orthologs #962. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 S.invicta:155

Q5KIZ4              	100.00%		E9IK58              	100.00%
Bootstrap support for Q5KIZ4 as seed ortholog is 100%.
Bootstrap support for E9IK58 as seed ortholog is 100%.

Group of orthologs #963. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:155

Q5K8W2              	100.00%		E9IX29              	100.00%
Bootstrap support for Q5K8W2 as seed ortholog is 100%.
Bootstrap support for E9IX29 as seed ortholog is 100%.

Group of orthologs #964. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 S.invicta:155

Q5KAU4              	100.00%		E9IZM2              	100.00%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for E9IZM2 as seed ortholog is 100%.

Group of orthologs #965. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 S.invicta:155

Q5KL21              	100.00%		E9IR42              	100.00%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for E9IR42 as seed ortholog is 100%.

Group of orthologs #966. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5KIH4              	100.00%		E9ID71              	100.00%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for E9ID71 as seed ortholog is 100%.

Group of orthologs #967. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5KE04              	100.00%		E9IHH0              	100.00%
Bootstrap support for Q5KE04 as seed ortholog is 100%.
Bootstrap support for E9IHH0 as seed ortholog is 100%.

Group of orthologs #968. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5K9A1              	100.00%		E9IN79              	100.00%
Bootstrap support for Q5K9A1 as seed ortholog is 100%.
Bootstrap support for E9IN79 as seed ortholog is 100%.

Group of orthologs #969. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5K8G5              	100.00%		E9J0H0              	100.00%
Bootstrap support for Q5K8G5 as seed ortholog is 100%.
Bootstrap support for E9J0H0 as seed ortholog is 100%.

Group of orthologs #970. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5KJP2              	100.00%		E9IT23              	100.00%
Bootstrap support for Q5KJP2 as seed ortholog is 100%.
Bootstrap support for E9IT23 as seed ortholog is 100%.

Group of orthologs #971. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5KJE5              	100.00%		E9IVX7              	100.00%
Bootstrap support for Q5KJE5 as seed ortholog is 100%.
Bootstrap support for E9IVX7 as seed ortholog is 100%.

Group of orthologs #972. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:40 S.invicta:154

P0CS28              	100.00%		E9JBZ3              	100.00%
Bootstrap support for P0CS28 as seed ortholog is 85%.
Bootstrap support for E9JBZ3 as seed ortholog is 100%.

Group of orthologs #973. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5KAP5              	100.00%		E9J9G7              	100.00%
Bootstrap support for Q5KAP5 as seed ortholog is 100%.
Bootstrap support for E9J9G7 as seed ortholog is 100%.

Group of orthologs #974. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 S.invicta:154

Q5KN65              	100.00%		E9J610              	100.00%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for E9J610 as seed ortholog is 100%.

Group of orthologs #975. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 S.invicta:153

Q5K9N6              	100.00%		E9IM01              	100.00%
Bootstrap support for Q5K9N6 as seed ortholog is 100%.
Bootstrap support for E9IM01 as seed ortholog is 100%.

Group of orthologs #976. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 S.invicta:153

Q5KNA8              	100.00%		E9IB31              	100.00%
Bootstrap support for Q5KNA8 as seed ortholog is 100%.
Bootstrap support for E9IB31 as seed ortholog is 100%.

Group of orthologs #977. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:96 S.invicta:153

Q5KAB6              	100.00%		E9IPS8              	100.00%
Bootstrap support for Q5KAB6 as seed ortholog is 97%.
Bootstrap support for E9IPS8 as seed ortholog is 100%.

Group of orthologs #978. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 S.invicta:153

P0CP08              	100.00%		E9JC48              	100.00%
Bootstrap support for P0CP08 as seed ortholog is 100%.
Bootstrap support for E9JC48 as seed ortholog is 100%.

Group of orthologs #979. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 S.invicta:153

Q5KJ89              	100.00%		E9J266              	100.00%
Bootstrap support for Q5KJ89 as seed ortholog is 100%.
Bootstrap support for E9J266 as seed ortholog is 100%.

Group of orthologs #980. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 S.invicta:152

P0CQ50              	100.00%		E9IIU5              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for E9IIU5 as seed ortholog is 100%.

Group of orthologs #981. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 S.invicta:152

Q5KF78              	100.00%		E9IKZ1              	100.00%
Bootstrap support for Q5KF78 as seed ortholog is 100%.
Bootstrap support for E9IKZ1 as seed ortholog is 100%.

Group of orthologs #982. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 S.invicta:152

Q5KK42              	100.00%		E9IRE6              	100.00%
Bootstrap support for Q5KK42 as seed ortholog is 100%.
Bootstrap support for E9IRE6 as seed ortholog is 100%.

Group of orthologs #983. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 S.invicta:152

Q5KAQ1              	100.00%		E9J004              	100.00%
Bootstrap support for Q5KAQ1 as seed ortholog is 100%.
Bootstrap support for E9J004 as seed ortholog is 100%.

Group of orthologs #984. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 S.invicta:151

P0CR72              	100.00%		E9J2Z8              	100.00%
                    	       		E9J4N9              	76.96%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for E9J2Z8 as seed ortholog is 100%.

Group of orthologs #985. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 S.invicta:151

Q5KKU8              	100.00%		E9IJD9              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for E9IJD9 as seed ortholog is 100%.

Group of orthologs #986. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 S.invicta:151

Q5KA81              	100.00%		E9JCB4              	100.00%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for E9JCB4 as seed ortholog is 100%.

Group of orthologs #987. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:151

Q5KPN8              	100.00%		E9J188              	100.00%
Bootstrap support for Q5KPN8 as seed ortholog is 99%.
Bootstrap support for E9J188 as seed ortholog is 100%.

Group of orthologs #988. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 S.invicta:7

Q5KIW7              	100.00%		E9J9S0              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for E9J9S0 as seed ortholog is 61%.
Alternative seed ortholog is E9J9R9 (7 bits away from this cluster)

Group of orthologs #989. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:150

Q5KM35              	100.00%		E9IKQ8              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 99%.
Bootstrap support for E9IKQ8 as seed ortholog is 100%.

Group of orthologs #990. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 S.invicta:150

Q5KMY6              	100.00%		E9IPF9              	100.00%
Bootstrap support for Q5KMY6 as seed ortholog is 100%.
Bootstrap support for E9IPF9 as seed ortholog is 100%.

Group of orthologs #991. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 S.invicta:91

Q5KPH8              	100.00%		E9IY50              	100.00%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for E9IY50 as seed ortholog is 99%.

Group of orthologs #992. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 S.invicta:150

Q5KGI2              	100.00%		E9JD09              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for E9JD09 as seed ortholog is 100%.

Group of orthologs #993. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 S.invicta:149

Q5KBG5              	100.00%		E9IJF9              	100.00%
Bootstrap support for Q5KBG5 as seed ortholog is 100%.
Bootstrap support for E9IJF9 as seed ortholog is 100%.

Group of orthologs #994. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 S.invicta:82

Q5KGC6              	100.00%		E9J3H3              	100.00%
Bootstrap support for Q5KGC6 as seed ortholog is 100%.
Bootstrap support for E9J3H3 as seed ortholog is 98%.

Group of orthologs #995. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 S.invicta:58

Q5KGP8              	100.00%		E9JCT0              	100.00%
Bootstrap support for Q5KGP8 as seed ortholog is 100%.
Bootstrap support for E9JCT0 as seed ortholog is 95%.

Group of orthologs #996. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 S.invicta:87

Q5K766              	100.00%		E9I8B3              	100.00%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for E9I8B3 as seed ortholog is 99%.

Group of orthologs #997. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 S.invicta:148

Q5K9C7              	100.00%		E9IEH6              	100.00%
Bootstrap support for Q5K9C7 as seed ortholog is 100%.
Bootstrap support for E9IEH6 as seed ortholog is 100%.

Group of orthologs #998. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 S.invicta:148

Q5KFR2              	100.00%		E9I9W4              	100.00%
Bootstrap support for Q5KFR2 as seed ortholog is 100%.
Bootstrap support for E9I9W4 as seed ortholog is 100%.

Group of orthologs #999. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 S.invicta:148

Q5KHX0              	100.00%		E9IH41              	100.00%
Bootstrap support for Q5KHX0 as seed ortholog is 100%.
Bootstrap support for E9IH41 as seed ortholog is 100%.

Group of orthologs #1000. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 S.invicta:148

Q5KP56              	100.00%		E9JBA2              	100.00%
Bootstrap support for Q5KP56 as seed ortholog is 100%.
Bootstrap support for E9JBA2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:147

Q5KA56              	100.00%		E9IVD6              	100.00%
                    	       		E9IMV8              	17.38%
Bootstrap support for Q5KA56 as seed ortholog is 100%.
Bootstrap support for E9IVD6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:147

Q5KME8              	100.00%		E9I8U1              	100.00%
Bootstrap support for Q5KME8 as seed ortholog is 100%.
Bootstrap support for E9I8U1 as seed ortholog is 100%.

Group of orthologs #1003. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:24 S.invicta:147

Q5K8V6              	100.00%		E9IU73              	100.00%
Bootstrap support for Q5K8V6 as seed ortholog is 74%.
Alternative seed ortholog is Q5KKX6 (24 bits away from this cluster)
Bootstrap support for E9IU73 as seed ortholog is 100%.

Group of orthologs #1004. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:147

Q5K8L7              	100.00%		E9J3J1              	100.00%
Bootstrap support for Q5K8L7 as seed ortholog is 100%.
Bootstrap support for E9J3J1 as seed ortholog is 100%.

Group of orthologs #1005. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:147

Q5KAN9              	100.00%		E9J9M0              	100.00%
Bootstrap support for Q5KAN9 as seed ortholog is 100%.
Bootstrap support for E9J9M0 as seed ortholog is 100%.

Group of orthologs #1006. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:147

Q5KLJ6              	100.00%		E9J5K3              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for E9J5K3 as seed ortholog is 100%.

Group of orthologs #1007. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 S.invicta:147

Q5KIJ0              	100.00%		E9JAT4              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for E9JAT4 as seed ortholog is 100%.

Group of orthologs #1008. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KFL6              	100.00%		E9ICX1              	100.00%
Bootstrap support for Q5KFL6 as seed ortholog is 100%.
Bootstrap support for E9ICX1 as seed ortholog is 100%.

Group of orthologs #1009. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KIH1              	100.00%		E9IN48              	100.00%
Bootstrap support for Q5KIH1 as seed ortholog is 100%.
Bootstrap support for E9IN48 as seed ortholog is 100%.

Group of orthologs #1010. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KCC1              	100.00%		E9IVZ4              	100.00%
Bootstrap support for Q5KCC1 as seed ortholog is 100%.
Bootstrap support for E9IVZ4 as seed ortholog is 100%.

Group of orthologs #1011. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KGD6              	100.00%		E9ISS9              	100.00%
Bootstrap support for Q5KGD6 as seed ortholog is 100%.
Bootstrap support for E9ISS9 as seed ortholog is 100%.

Group of orthologs #1012. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KC23              	100.00%		E9J751              	100.00%
Bootstrap support for Q5KC23 as seed ortholog is 100%.
Bootstrap support for E9J751 as seed ortholog is 100%.

Group of orthologs #1013. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KNG3              	100.00%		E9IZS6              	100.00%
Bootstrap support for Q5KNG3 as seed ortholog is 100%.
Bootstrap support for E9IZS6 as seed ortholog is 100%.

Group of orthologs #1014. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KKQ0              	100.00%		E9J9G9              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for E9J9G9 as seed ortholog is 100%.

Group of orthologs #1015. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 S.invicta:146

Q5KI23              	100.00%		E9JCY5              	100.00%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for E9JCY5 as seed ortholog is 100%.

Group of orthologs #1016. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 S.invicta:145

Q5KCL9              	100.00%		E9IDA7              	100.00%
Bootstrap support for Q5KCL9 as seed ortholog is 100%.
Bootstrap support for E9IDA7 as seed ortholog is 100%.

Group of orthologs #1017. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 S.invicta:145

Q5KDS7              	100.00%		E9ILT7              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 100%.
Bootstrap support for E9ILT7 as seed ortholog is 100%.

Group of orthologs #1018. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:99

Q5KNW6              	100.00%		E9IG96              	100.00%
Q5KP01              	6.45%		
Bootstrap support for Q5KNW6 as seed ortholog is 100%.
Bootstrap support for E9IG96 as seed ortholog is 99%.

Group of orthologs #1019. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:144

Q5K7J1              	100.00%		E9I9S6              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for E9I9S6 as seed ortholog is 100%.

Group of orthologs #1020. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:144

Q5KBB3              	100.00%		E9IAN8              	100.00%
Bootstrap support for Q5KBB3 as seed ortholog is 100%.
Bootstrap support for E9IAN8 as seed ortholog is 100%.

Group of orthologs #1021. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:144

Q5K7B3              	100.00%		E9IW92              	100.00%
Bootstrap support for Q5K7B3 as seed ortholog is 100%.
Bootstrap support for E9IW92 as seed ortholog is 100%.

Group of orthologs #1022. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:144

Q5KHV3              	100.00%		E9IRP3              	100.00%
Bootstrap support for Q5KHV3 as seed ortholog is 100%.
Bootstrap support for E9IRP3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:144

Q5KQ34              	100.00%		E9INN8              	100.00%
Bootstrap support for Q5KQ34 as seed ortholog is 100%.
Bootstrap support for E9INN8 as seed ortholog is 100%.

Group of orthologs #1024. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 S.invicta:144

Q5KM44              	100.00%		E9J1R9              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for E9J1R9 as seed ortholog is 100%.

Group of orthologs #1025. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:31 S.invicta:143

Q5KAA2              	100.00%		E9J9H6              	100.00%
Q5KLV1              	16.36%		E9J9H8              	25.88%
                    	       		E9JCL7              	13.52%
                    	       		E9JCL6              	8.76%
Bootstrap support for Q5KAA2 as seed ortholog is 86%.
Bootstrap support for E9J9H6 as seed ortholog is 100%.

Group of orthologs #1026. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 S.invicta:143

Q5K9I0              	100.00%		E9IE23              	100.00%
Bootstrap support for Q5K9I0 as seed ortholog is 100%.
Bootstrap support for E9IE23 as seed ortholog is 100%.

Group of orthologs #1027. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 S.invicta:143

Q5KCL5              	100.00%		E9ID79              	100.00%
Bootstrap support for Q5KCL5 as seed ortholog is 100%.
Bootstrap support for E9ID79 as seed ortholog is 100%.

Group of orthologs #1028. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 S.invicta:143

Q5KPC0              	100.00%		E9IHE4              	100.00%
Bootstrap support for Q5KPC0 as seed ortholog is 100%.
Bootstrap support for E9IHE4 as seed ortholog is 100%.

Group of orthologs #1029. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:17 S.invicta:143

Q5KJK1              	100.00%		E9IXZ8              	100.00%
Bootstrap support for Q5KJK1 as seed ortholog is 66%.
Alternative seed ortholog is Q5KAN3 (17 bits away from this cluster)
Bootstrap support for E9IXZ8 as seed ortholog is 100%.

Group of orthologs #1030. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 S.invicta:142

Q5K7U3              	100.00%		E9IEE5              	100.00%
Bootstrap support for Q5K7U3 as seed ortholog is 100%.
Bootstrap support for E9IEE5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:72 S.invicta:20

Q5KAK0              	100.00%		E9IPG4              	100.00%
Bootstrap support for Q5KAK0 as seed ortholog is 98%.
Bootstrap support for E9IPG4 as seed ortholog is 69%.
Alternative seed ortholog is E9ICM5 (20 bits away from this cluster)

Group of orthologs #1032. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 S.invicta:142

Q5KG24              	100.00%		E9IQH7              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 100%.
Bootstrap support for E9IQH7 as seed ortholog is 100%.

Group of orthologs #1033. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 S.invicta:142

Q5KD44              	100.00%		E9IVX2              	100.00%
Bootstrap support for Q5KD44 as seed ortholog is 100%.
Bootstrap support for E9IVX2 as seed ortholog is 100%.

Group of orthologs #1034. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 S.invicta:142

Q5KKR2              	100.00%		E9IRQ7              	100.00%
Bootstrap support for Q5KKR2 as seed ortholog is 100%.
Bootstrap support for E9IRQ7 as seed ortholog is 100%.

Group of orthologs #1035. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 S.invicta:141

Q5KBJ3              	100.00%		E9I867              	100.00%
Bootstrap support for Q5KBJ3 as seed ortholog is 100%.
Bootstrap support for E9I867 as seed ortholog is 100%.

Group of orthologs #1036. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 S.invicta:141

Q5KFQ2              	100.00%		E9IDT8              	100.00%
Bootstrap support for Q5KFQ2 as seed ortholog is 100%.
Bootstrap support for E9IDT8 as seed ortholog is 100%.

Group of orthologs #1037. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 S.invicta:141

Q5KFQ4              	100.00%		E9IGK4              	100.00%
Bootstrap support for Q5KFQ4 as seed ortholog is 100%.
Bootstrap support for E9IGK4 as seed ortholog is 100%.

Group of orthologs #1038. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 S.invicta:141

Q5KPM8              	100.00%		E9I9K9              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for E9I9K9 as seed ortholog is 100%.

Group of orthologs #1039. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:140

Q5KG53              	100.00%		E9I8Q2              	100.00%
Q5KEM9              	10.83%		
Q5KLC1              	10.83%		
Q5KFZ8              	10.23%		
Bootstrap support for Q5KG53 as seed ortholog is 94%.
Bootstrap support for E9I8Q2 as seed ortholog is 100%.

Group of orthologs #1040. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 S.invicta:140

P0CN62              	100.00%		E9IBT5              	100.00%
Bootstrap support for P0CN62 as seed ortholog is 100%.
Bootstrap support for E9IBT5 as seed ortholog is 100%.

Group of orthologs #1041. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 S.invicta:140

Q5K760              	100.00%		E9IJI7              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for E9IJI7 as seed ortholog is 100%.

Group of orthologs #1042. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:139

Q5KIC8              	100.00%		E9IX71              	100.00%
                    	       		E9J9B0              	48.51%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for E9IX71 as seed ortholog is 100%.

Group of orthologs #1043. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:139

Q5KD76              	100.00%		E9ILG6              	100.00%
Bootstrap support for Q5KD76 as seed ortholog is 100%.
Bootstrap support for E9ILG6 as seed ortholog is 100%.

Group of orthologs #1044. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:139

Q5K9T5              	100.00%		E9IRX0              	100.00%
Bootstrap support for Q5K9T5 as seed ortholog is 100%.
Bootstrap support for E9IRX0 as seed ortholog is 100%.

Group of orthologs #1045. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:139

Q5KEW4              	100.00%		E9IRX5              	100.00%
Bootstrap support for Q5KEW4 as seed ortholog is 100%.
Bootstrap support for E9IRX5 as seed ortholog is 100%.

Group of orthologs #1046. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:139

Q5KFJ8              	100.00%		E9IUF0              	100.00%
Bootstrap support for Q5KFJ8 as seed ortholog is 100%.
Bootstrap support for E9IUF0 as seed ortholog is 100%.

Group of orthologs #1047. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:139

Q5KEG8              	100.00%		E9IVJ1              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for E9IVJ1 as seed ortholog is 100%.

Group of orthologs #1048. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 S.invicta:67

Q5KEP7              	100.00%		E9J335              	100.00%
Bootstrap support for Q5KEP7 as seed ortholog is 100%.
Bootstrap support for E9J335 as seed ortholog is 94%.

Group of orthologs #1049. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 S.invicta:138

Q5KN56              	100.00%		E9IHL1              	100.00%
Q5K6U5              	17.38%		
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for E9IHL1 as seed ortholog is 100%.

Group of orthologs #1050. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:64

Q5KDN6              	100.00%		E9IBC4              	100.00%
Bootstrap support for Q5KDN6 as seed ortholog is 89%.
Bootstrap support for E9IBC4 as seed ortholog is 94%.

Group of orthologs #1051. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 S.invicta:85

P0CP80              	100.00%		E9IKY2              	100.00%
Bootstrap support for P0CP80 as seed ortholog is 100%.
Bootstrap support for E9IKY2 as seed ortholog is 99%.

Group of orthologs #1052. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 S.invicta:138

Q5KKT8              	100.00%		E9IF25              	100.00%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for E9IF25 as seed ortholog is 100%.

Group of orthologs #1053. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:35 S.invicta:24

Q5KCL3              	100.00%		E9IEY0              	100.00%
Bootstrap support for Q5KCL3 as seed ortholog is 84%.
Bootstrap support for E9IEY0 as seed ortholog is 75%.

Group of orthologs #1054. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 S.invicta:137

Q5KBI4              	100.00%		E9ILA5              	100.00%
Bootstrap support for Q5KBI4 as seed ortholog is 100%.
Bootstrap support for E9ILA5 as seed ortholog is 100%.

Group of orthologs #1055. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 S.invicta:137

P0CO96              	100.00%		E9IU74              	100.00%
Bootstrap support for P0CO96 as seed ortholog is 100%.
Bootstrap support for E9IU74 as seed ortholog is 100%.

Group of orthologs #1056. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 S.invicta:137

Q5KNR2              	100.00%		E9IGV2              	100.00%
Bootstrap support for Q5KNR2 as seed ortholog is 100%.
Bootstrap support for E9IGV2 as seed ortholog is 100%.

Group of orthologs #1057. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 S.invicta:137

Q5K6W9              	100.00%		E9IYE5              	100.00%
Bootstrap support for Q5K6W9 as seed ortholog is 100%.
Bootstrap support for E9IYE5 as seed ortholog is 100%.

Group of orthologs #1058. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 S.invicta:137

Q5K7F0              	100.00%		E9J4I4              	100.00%
Bootstrap support for Q5K7F0 as seed ortholog is 100%.
Bootstrap support for E9J4I4 as seed ortholog is 100%.

Group of orthologs #1059. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 S.invicta:137

Q5KPH3              	100.00%		E9IUM1              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for E9IUM1 as seed ortholog is 100%.

Group of orthologs #1060. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:83 S.invicta:136

Q5KK58              	100.00%		E9IV40              	100.00%
                    	       		E9IZ63              	49.28%
Bootstrap support for Q5KK58 as seed ortholog is 99%.
Bootstrap support for E9IV40 as seed ortholog is 100%.

Group of orthologs #1061. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:57 S.invicta:136

Q5KCB7              	100.00%		E9IDS8              	100.00%
Bootstrap support for Q5KCB7 as seed ortholog is 93%.
Bootstrap support for E9IDS8 as seed ortholog is 100%.

Group of orthologs #1062. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 S.invicta:79

Q5KF95              	100.00%		E9IG18              	100.00%
Bootstrap support for Q5KF95 as seed ortholog is 100%.
Bootstrap support for E9IG18 as seed ortholog is 99%.

Group of orthologs #1063. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 S.invicta:136

Q5KI05              	100.00%		E9IP16              	100.00%
Bootstrap support for Q5KI05 as seed ortholog is 100%.
Bootstrap support for E9IP16 as seed ortholog is 100%.

Group of orthologs #1064. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 S.invicta:136

Q5KCY0              	100.00%		E9IYX4              	100.00%
Bootstrap support for Q5KCY0 as seed ortholog is 100%.
Bootstrap support for E9IYX4 as seed ortholog is 100%.

Group of orthologs #1065. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 S.invicta:136

Q5KME4              	100.00%		E9IV17              	100.00%
Bootstrap support for Q5KME4 as seed ortholog is 100%.
Bootstrap support for E9IV17 as seed ortholog is 100%.

Group of orthologs #1066. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 S.invicta:135

Q5KKG2              	100.00%		E9J3Y5              	100.00%
Q5KDQ6              	6.92%		E9J3Y7              	22.97%
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for E9J3Y5 as seed ortholog is 100%.

Group of orthologs #1067. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 S.invicta:135

P0CN04              	100.00%		E9IAX0              	100.00%
                    	       		E9J1H8              	41.83%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for E9IAX0 as seed ortholog is 100%.

Group of orthologs #1068. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 S.invicta:135

P0CS06              	100.00%		E9IVG3              	100.00%
Bootstrap support for P0CS06 as seed ortholog is 100%.
Bootstrap support for E9IVG3 as seed ortholog is 100%.

Group of orthologs #1069. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 S.invicta:135

Q5KPS7              	100.00%		E9IN75              	100.00%
Bootstrap support for Q5KPS7 as seed ortholog is 100%.
Bootstrap support for E9IN75 as seed ortholog is 100%.

Group of orthologs #1070. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:134

Q5K905              	100.00%		E9IMS8              	100.00%
                    	       		E9IAZ3              	10.29%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for E9IMS8 as seed ortholog is 100%.

Group of orthologs #1071. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:134

Q5KIE7              	100.00%		E9IGK8              	100.00%
Bootstrap support for Q5KIE7 as seed ortholog is 100%.
Bootstrap support for E9IGK8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:134

Q5KIK2              	100.00%		E9II57              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for E9II57 as seed ortholog is 100%.

Group of orthologs #1073. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:134

Q5KPB8              	100.00%		E9IE62              	100.00%
Bootstrap support for Q5KPB8 as seed ortholog is 100%.
Bootstrap support for E9IE62 as seed ortholog is 100%.

Group of orthologs #1074. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:134

P0CR82              	100.00%		E9J042              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for E9J042 as seed ortholog is 100%.

Group of orthologs #1075. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 S.invicta:134

Q5K9B3              	100.00%		E9J1N5              	100.00%
Bootstrap support for Q5K9B3 as seed ortholog is 100%.
Bootstrap support for E9J1N5 as seed ortholog is 100%.

Group of orthologs #1076. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:57 S.invicta:133

Q5K8Q2              	100.00%		E9JDG7              	100.00%
Q5KNM0              	5.48%		
Bootstrap support for Q5K8Q2 as seed ortholog is 88%.
Bootstrap support for E9JDG7 as seed ortholog is 100%.

Group of orthologs #1077. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 S.invicta:133

Q5K9C8              	100.00%		E9IR35              	100.00%
Bootstrap support for Q5K9C8 as seed ortholog is 100%.
Bootstrap support for E9IR35 as seed ortholog is 100%.

Group of orthologs #1078. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 S.invicta:83

Q5KMD1              	100.00%		E9IH76              	100.00%
Bootstrap support for Q5KMD1 as seed ortholog is 100%.
Bootstrap support for E9IH76 as seed ortholog is 99%.

Group of orthologs #1079. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 S.invicta:133

Q5KK13              	100.00%		E9IMT8              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for E9IMT8 as seed ortholog is 100%.

Group of orthologs #1080. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 S.invicta:133

Q5KFI3              	100.00%		E9ITT7              	100.00%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for E9ITT7 as seed ortholog is 100%.

Group of orthologs #1081. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 S.invicta:133

Q5KP23              	100.00%		E9IZ98              	100.00%
Bootstrap support for Q5KP23 as seed ortholog is 100%.
Bootstrap support for E9IZ98 as seed ortholog is 100%.

Group of orthologs #1082. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 S.invicta:133

Q5KN73              	100.00%		E9JBD2              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for E9JBD2 as seed ortholog is 100%.

Group of orthologs #1083. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 S.invicta:132

Q5KFY9              	100.00%		E9J3M5              	100.00%
                    	       		E9IN24              	23.34%
                    	       		E9IN25              	12.51%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for E9J3M5 as seed ortholog is 100%.

Group of orthologs #1084. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:1 S.invicta:132

Q5KJC7              	100.00%		E9ILT9              	100.00%
                    	       		E9IY44              	24.41%
Bootstrap support for Q5KJC7 as seed ortholog is 48%.
Alternative seed ortholog is Q5KNU9 (1 bits away from this cluster)
Bootstrap support for E9ILT9 as seed ortholog is 100%.

Group of orthologs #1085. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 S.invicta:131

Q5KFB3              	100.00%		E9IFJ8              	100.00%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for E9IFJ8 as seed ortholog is 100%.

Group of orthologs #1086. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 S.invicta:131

Q5KN72              	100.00%		E9IPH3              	100.00%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for E9IPH3 as seed ortholog is 100%.

Group of orthologs #1087. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:131

Q5KFU2              	100.00%		E9J8N2              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 99%.
Bootstrap support for E9J8N2 as seed ortholog is 100%.

Group of orthologs #1088. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 S.invicta:130

Q5KEX0              	100.00%		E9J8R6              	100.00%
Bootstrap support for Q5KEX0 as seed ortholog is 100%.
Bootstrap support for E9J8R6 as seed ortholog is 100%.

Group of orthologs #1089. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 S.invicta:129

Q5K6U7              	100.00%		E9IDG9              	100.00%
                    	       		E9J9P3              	100.00%
Bootstrap support for Q5K6U7 as seed ortholog is 100%.
Bootstrap support for E9IDG9 as seed ortholog is 100%.
Bootstrap support for E9J9P3 as seed ortholog is 100%.

Group of orthologs #1090. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:22 S.invicta:129

Q5KG67              	100.00%		E9IQH4              	100.00%
Bootstrap support for Q5KG67 as seed ortholog is 78%.
Bootstrap support for E9IQH4 as seed ortholog is 100%.

Group of orthologs #1091. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 S.invicta:129

Q5KCD9              	100.00%		E9J2S9              	100.00%
Bootstrap support for Q5KCD9 as seed ortholog is 100%.
Bootstrap support for E9J2S9 as seed ortholog is 100%.

Group of orthologs #1092. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:89 S.invicta:129

Q5KLG7              	100.00%		E9J0Y6              	100.00%
Bootstrap support for Q5KLG7 as seed ortholog is 100%.
Bootstrap support for E9J0Y6 as seed ortholog is 100%.

Group of orthologs #1093. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5KDN1              	100.00%		E9IK40              	100.00%
                    	       		E9IK41              	46.64%
Bootstrap support for Q5KDN1 as seed ortholog is 100%.
Bootstrap support for E9IK40 as seed ortholog is 100%.

Group of orthologs #1094. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5KPZ0              	100.00%		E9J9I0              	100.00%
Q5KK28              	7.94%		
Bootstrap support for Q5KPZ0 as seed ortholog is 100%.
Bootstrap support for E9J9I0 as seed ortholog is 100%.

Group of orthologs #1095. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5K9X5              	100.00%		E9IFZ1              	100.00%
Bootstrap support for Q5K9X5 as seed ortholog is 100%.
Bootstrap support for E9IFZ1 as seed ortholog is 100%.

Group of orthologs #1096. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5KAJ2              	100.00%		E9IKP1              	100.00%
Bootstrap support for Q5KAJ2 as seed ortholog is 100%.
Bootstrap support for E9IKP1 as seed ortholog is 100%.

Group of orthologs #1097. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5KIE3              	100.00%		E9IMS5              	100.00%
Bootstrap support for Q5KIE3 as seed ortholog is 100%.
Bootstrap support for E9IMS5 as seed ortholog is 100%.

Group of orthologs #1098. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5KEP5              	100.00%		E9IWS1              	100.00%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for E9IWS1 as seed ortholog is 100%.

Group of orthologs #1099. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5K864              	100.00%		E9J4P2              	100.00%
Bootstrap support for Q5K864 as seed ortholog is 100%.
Bootstrap support for E9J4P2 as seed ortholog is 100%.

Group of orthologs #1100. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 S.invicta:128

Q5KQ88              	100.00%		E9IUL6              	100.00%
Bootstrap support for Q5KQ88 as seed ortholog is 100%.
Bootstrap support for E9IUL6 as seed ortholog is 100%.

Group of orthologs #1101. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 S.invicta:127

Q5KHB8              	100.00%		E9I8E8              	100.00%
Q5K7D6              	100.00%		E9I832              	100.00%
Bootstrap support for Q5KHB8 as seed ortholog is 100%.
Bootstrap support for Q5K7D6 as seed ortholog is 100%.
Bootstrap support for E9I8E8 as seed ortholog is 100%.
Bootstrap support for E9I832 as seed ortholog is 100%.

Group of orthologs #1102. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:51 S.invicta:127

Q5KD55              	100.00%		E9IU06              	100.00%
Bootstrap support for Q5KD55 as seed ortholog is 68%.
Alternative seed ortholog is Q5KI63 (51 bits away from this cluster)
Bootstrap support for E9IU06 as seed ortholog is 100%.

Group of orthologs #1103. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 S.invicta:127

Q5KHF0              	100.00%		E9IQP2              	100.00%
Bootstrap support for Q5KHF0 as seed ortholog is 100%.
Bootstrap support for E9IQP2 as seed ortholog is 100%.

Group of orthologs #1104. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 S.invicta:127

Q5KDH7              	100.00%		E9J1W0              	100.00%
Bootstrap support for Q5KDH7 as seed ortholog is 100%.
Bootstrap support for E9J1W0 as seed ortholog is 100%.

Group of orthologs #1105. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:126

Q5KPH7              	100.00%		E9IYU4              	100.00%
                    	       		E9IBX8              	36.58%
Bootstrap support for Q5KPH7 as seed ortholog is 100%.
Bootstrap support for E9IYU4 as seed ortholog is 100%.

Group of orthologs #1106. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:126

Q5KKM7              	100.00%		E9J2Y8              	100.00%
                    	       		E9JAT8              	9.25%
Bootstrap support for Q5KKM7 as seed ortholog is 100%.
Bootstrap support for E9J2Y8 as seed ortholog is 100%.

Group of orthologs #1107. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:78 S.invicta:78

P0CS40              	100.00%		E9IJB1              	100.00%
Bootstrap support for P0CS40 as seed ortholog is 98%.
Bootstrap support for E9IJB1 as seed ortholog is 97%.

Group of orthologs #1108. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:126

Q5KA94              	100.00%		E9ILR5              	100.00%
Bootstrap support for Q5KA94 as seed ortholog is 100%.
Bootstrap support for E9ILR5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:126

Q5KLE1              	100.00%		E9IEY8              	100.00%
Bootstrap support for Q5KLE1 as seed ortholog is 100%.
Bootstrap support for E9IEY8 as seed ortholog is 100%.

Group of orthologs #1110. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:31

Q5KFV8              	100.00%		E9IKH5              	100.00%
Bootstrap support for Q5KFV8 as seed ortholog is 100%.
Bootstrap support for E9IKH5 as seed ortholog is 86%.

Group of orthologs #1111. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:126

Q5KMG9              	100.00%		E9IFM9              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for E9IFM9 as seed ortholog is 100%.

Group of orthologs #1112. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 S.invicta:126

Q5KMC3              	100.00%		E9II76              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for E9II76 as seed ortholog is 100%.

Group of orthologs #1113. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:28 S.invicta:35

Q5KIJ2              	100.00%		E9IWJ3              	100.00%
Bootstrap support for Q5KIJ2 as seed ortholog is 88%.
Bootstrap support for E9IWJ3 as seed ortholog is 94%.

Group of orthologs #1114. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 S.invicta:23

Q5K8Z0              	100.00%		E9JBX8              	100.00%
                    	       		E9IPG1              	85.09%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for E9JBX8 as seed ortholog is 78%.

Group of orthologs #1115. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:63

Q5KFL8              	100.00%		E9J6E1              	100.00%
Q5KLI6              	7.79%		E9J6D7              	73.33%
Bootstrap support for Q5KFL8 as seed ortholog is 100%.
Bootstrap support for E9J6E1 as seed ortholog is 86%.

Group of orthologs #1116. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:124

P0CN06              	100.00%		E9J110              	100.00%
                    	       		E9ITN6              	9.18%
Bootstrap support for P0CN06 as seed ortholog is 100%.
Bootstrap support for E9J110 as seed ortholog is 100%.

Group of orthologs #1117. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:124

Q5KDY6              	100.00%		E9ICQ3              	100.00%
Bootstrap support for Q5KDY6 as seed ortholog is 100%.
Bootstrap support for E9ICQ3 as seed ortholog is 100%.

Group of orthologs #1118. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:124

Q5KIE2              	100.00%		E9IFT3              	100.00%
Bootstrap support for Q5KIE2 as seed ortholog is 100%.
Bootstrap support for E9IFT3 as seed ortholog is 100%.

Group of orthologs #1119. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:59

Q5KD12              	100.00%		E9ILJ2              	100.00%
Bootstrap support for Q5KD12 as seed ortholog is 100%.
Bootstrap support for E9ILJ2 as seed ortholog is 99%.

Group of orthologs #1120. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:46

Q5KA73              	100.00%		E9IS93              	100.00%
Bootstrap support for Q5KA73 as seed ortholog is 99%.
Bootstrap support for E9IS93 as seed ortholog is 92%.

Group of orthologs #1121. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:124

Q5KGY5              	100.00%		E9ILL1              	100.00%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for E9ILL1 as seed ortholog is 100%.

Group of orthologs #1122. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 S.invicta:124

Q5KE85              	100.00%		E9J4Q5              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for E9J4Q5 as seed ortholog is 100%.

Group of orthologs #1123. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:10 S.invicta:11

Q5KMV5              	100.00%		E9IXL5              	100.00%
Bootstrap support for Q5KMV5 as seed ortholog is 59%.
Alternative seed ortholog is Q5KIP0 (10 bits away from this cluster)
Bootstrap support for E9IXL5 as seed ortholog is 71%.
Alternative seed ortholog is E9IYV8 (11 bits away from this cluster)

Group of orthologs #1124. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:123

Q5KM54              	100.00%		E9IF29              	100.00%
Bootstrap support for Q5KM54 as seed ortholog is 100%.
Bootstrap support for E9IF29 as seed ortholog is 100%.

Group of orthologs #1125. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:123

Q5KGG8              	100.00%		E9IL31              	100.00%
Bootstrap support for Q5KGG8 as seed ortholog is 100%.
Bootstrap support for E9IL31 as seed ortholog is 100%.

Group of orthologs #1126. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:123

Q5KN25              	100.00%		E9IIL0              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for E9IIL0 as seed ortholog is 100%.

Group of orthologs #1127. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:123

Q5KJ49              	100.00%		E9ITI5              	100.00%
Bootstrap support for Q5KJ49 as seed ortholog is 100%.
Bootstrap support for E9ITI5 as seed ortholog is 100%.

Group of orthologs #1128. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:28 S.invicta:123

Q5KE19              	100.00%		E9J3B2              	100.00%
Bootstrap support for Q5KE19 as seed ortholog is 85%.
Bootstrap support for E9J3B2 as seed ortholog is 100%.

Group of orthologs #1129. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:123

Q5KIC9              	100.00%		E9J046              	100.00%
Bootstrap support for Q5KIC9 as seed ortholog is 100%.
Bootstrap support for E9J046 as seed ortholog is 100%.

Group of orthologs #1130. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 S.invicta:123

Q5KIG9              	100.00%		E9JCP8              	100.00%
Bootstrap support for Q5KIG9 as seed ortholog is 100%.
Bootstrap support for E9JCP8 as seed ortholog is 100%.

Group of orthologs #1131. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 S.invicta:122

Q5KEP4              	100.00%		E9I9I1              	100.00%
Bootstrap support for Q5KEP4 as seed ortholog is 100%.
Bootstrap support for E9I9I1 as seed ortholog is 100%.

Group of orthologs #1132. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 S.invicta:122

Q5KIW3              	100.00%		E9IMM8              	100.00%
Bootstrap support for Q5KIW3 as seed ortholog is 100%.
Bootstrap support for E9IMM8 as seed ortholog is 100%.

Group of orthologs #1133. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:6 S.invicta:121

Q5KEP1              	100.00%		E9IK78              	100.00%
Q5KEP0              	55.63%		E9IX32              	39.08%
Q5KEN9              	51.88%		E9J1H2              	12.15%
Q5KEN8              	49.55%		
Q5KBZ7              	42.43%		
Bootstrap support for Q5KEP1 as seed ortholog is 65%.
Alternative seed ortholog is Q5KP52 (6 bits away from this cluster)
Bootstrap support for E9IK78 as seed ortholog is 100%.

Group of orthologs #1134. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:121

Q5KHL0              	100.00%		E9IN74              	100.00%
                    	       		E9IG15              	19.10%
                    	       		E9IEM6              	11.19%
Bootstrap support for Q5KHL0 as seed ortholog is 95%.
Bootstrap support for E9IN74 as seed ortholog is 100%.

Group of orthologs #1135. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:121

Q5K7S4              	100.00%		E9IBJ5              	100.00%
Bootstrap support for Q5K7S4 as seed ortholog is 100%.
Bootstrap support for E9IBJ5 as seed ortholog is 100%.

Group of orthologs #1136. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:121

Q5KDG7              	100.00%		E9I9V8              	100.00%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for E9I9V8 as seed ortholog is 100%.

Group of orthologs #1137. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:121

Q5KEC8              	100.00%		E9I9Q7              	100.00%
Bootstrap support for Q5KEC8 as seed ortholog is 100%.
Bootstrap support for E9I9Q7 as seed ortholog is 100%.

Group of orthologs #1138. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:121

Q5KK97              	100.00%		E9ID90              	100.00%
Bootstrap support for Q5KK97 as seed ortholog is 100%.
Bootstrap support for E9ID90 as seed ortholog is 100%.

Group of orthologs #1139. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 S.invicta:121

Q5KKH3              	100.00%		E9J0M8              	100.00%
Bootstrap support for Q5KKH3 as seed ortholog is 100%.
Bootstrap support for E9J0M8 as seed ortholog is 100%.

Group of orthologs #1140. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:120

Q5KAL4              	100.00%		E9ILE3              	100.00%
Bootstrap support for Q5KAL4 as seed ortholog is 100%.
Bootstrap support for E9ILE3 as seed ortholog is 100%.

Group of orthologs #1141. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:48

Q5KN37              	100.00%		E9IAQ4              	100.00%
Bootstrap support for Q5KN37 as seed ortholog is 100%.
Bootstrap support for E9IAQ4 as seed ortholog is 99%.

Group of orthologs #1142. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:120

P0CM76              	100.00%		E9ISC1              	100.00%
Bootstrap support for P0CM76 as seed ortholog is 100%.
Bootstrap support for E9ISC1 as seed ortholog is 100%.

Group of orthologs #1143. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:120

Q5KA82              	100.00%		E9ISE4              	100.00%
Bootstrap support for Q5KA82 as seed ortholog is 100%.
Bootstrap support for E9ISE4 as seed ortholog is 100%.

Group of orthologs #1144. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:120

Q5KKY7              	100.00%		E9IRU8              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for E9IRU8 as seed ortholog is 100%.

Group of orthologs #1145. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:120

P0CL96              	100.00%		E9J6U5              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 100%.
Bootstrap support for E9J6U5 as seed ortholog is 100%.

Group of orthologs #1146. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:33 S.invicta:120

Q5KJ65              	100.00%		E9IWF7              	100.00%
Bootstrap support for Q5KJ65 as seed ortholog is 86%.
Bootstrap support for E9IWF7 as seed ortholog is 100%.

Group of orthologs #1147. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 S.invicta:120

Q5KNG8              	100.00%		E9IYR1              	100.00%
Bootstrap support for Q5KNG8 as seed ortholog is 100%.
Bootstrap support for E9IYR1 as seed ortholog is 100%.

Group of orthologs #1148. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 S.invicta:119

Q5KL83              	100.00%		E9IYA4              	100.00%
                    	       		E9IGT2              	9.18%
Bootstrap support for Q5KL83 as seed ortholog is 100%.
Bootstrap support for E9IYA4 as seed ortholog is 100%.

Group of orthologs #1149. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 S.invicta:8

Q5K7E1              	100.00%		E9IIU7              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for E9IIU7 as seed ortholog is 62%.
Alternative seed ortholog is E9IBU8 (8 bits away from this cluster)

Group of orthologs #1150. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 S.invicta:119

Q5KCA1              	100.00%		E9IPD8              	100.00%
Bootstrap support for Q5KCA1 as seed ortholog is 100%.
Bootstrap support for E9IPD8 as seed ortholog is 100%.

Group of orthologs #1151. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 S.invicta:119

Q5KPJ3              	100.00%		E9J4W3              	100.00%
Bootstrap support for Q5KPJ3 as seed ortholog is 100%.
Bootstrap support for E9J4W3 as seed ortholog is 100%.

Group of orthologs #1152. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 S.invicta:118

Q5KFD2              	100.00%		E9ILW5              	100.00%
Bootstrap support for Q5KFD2 as seed ortholog is 100%.
Bootstrap support for E9ILW5 as seed ortholog is 100%.

Group of orthologs #1153. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:36 S.invicta:41

Q5KQ41              	100.00%		E9IGV1              	100.00%
Bootstrap support for Q5KQ41 as seed ortholog is 90%.
Bootstrap support for E9IGV1 as seed ortholog is 92%.

Group of orthologs #1154. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 S.invicta:118

Q5KL32              	100.00%		E9IPG3              	100.00%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for E9IPG3 as seed ortholog is 100%.

Group of orthologs #1155. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 S.invicta:118

P0CR68              	100.00%		E9J439              	100.00%
Bootstrap support for P0CR68 as seed ortholog is 100%.
Bootstrap support for E9J439 as seed ortholog is 100%.

Group of orthologs #1156. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 S.invicta:118

Q5KBQ4              	100.00%		E9J794              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for E9J794 as seed ortholog is 100%.

Group of orthologs #1157. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 S.invicta:117

Q5KH50              	100.00%		E9IUM5              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for E9IUM5 as seed ortholog is 100%.

Group of orthologs #1158. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:24 S.invicta:116

P0CP94              	100.00%		E9IW79              	100.00%
Bootstrap support for P0CP94 as seed ortholog is 90%.
Bootstrap support for E9IW79 as seed ortholog is 100%.

Group of orthologs #1159. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 S.invicta:116

Q5KKX2              	100.00%		E9IRW5              	100.00%
Bootstrap support for Q5KKX2 as seed ortholog is 100%.
Bootstrap support for E9IRW5 as seed ortholog is 100%.

Group of orthologs #1160. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 S.invicta:115

Q5KNZ5              	100.00%		E9IAS4              	100.00%
                    	       		E9IY00              	6.03%
Bootstrap support for Q5KNZ5 as seed ortholog is 100%.
Bootstrap support for E9IAS4 as seed ortholog is 100%.

Group of orthologs #1161. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 S.invicta:115

Q5KGD0              	100.00%		E9ILS0              	100.00%
Bootstrap support for Q5KGD0 as seed ortholog is 100%.
Bootstrap support for E9ILS0 as seed ortholog is 100%.

Group of orthologs #1162. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 S.invicta:115

Q5K8V4              	100.00%		E9IU83              	100.00%
Bootstrap support for Q5K8V4 as seed ortholog is 100%.
Bootstrap support for E9IU83 as seed ortholog is 100%.

Group of orthologs #1163. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 S.invicta:115

Q5KQ14              	100.00%		E9IFS5              	100.00%
Bootstrap support for Q5KQ14 as seed ortholog is 100%.
Bootstrap support for E9IFS5 as seed ortholog is 100%.

Group of orthologs #1164. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 S.invicta:115

Q5KLD3              	100.00%		E9IQ51              	100.00%
Bootstrap support for Q5KLD3 as seed ortholog is 100%.
Bootstrap support for E9IQ51 as seed ortholog is 100%.

Group of orthologs #1165. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 S.invicta:115

Q5KNW5              	100.00%		E9JCD1              	100.00%
Bootstrap support for Q5KNW5 as seed ortholog is 100%.
Bootstrap support for E9JCD1 as seed ortholog is 100%.

Group of orthologs #1166. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:114

Q5KHN0              	100.00%		E9ICQ7              	100.00%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for E9ICQ7 as seed ortholog is 100%.

Group of orthologs #1167. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:114

Q5KE79              	100.00%		E9ILJ1              	100.00%
Bootstrap support for Q5KE79 as seed ortholog is 100%.
Bootstrap support for E9ILJ1 as seed ortholog is 100%.

Group of orthologs #1168. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 S.invicta:114

Q5KJL3              	100.00%		E9J8K5              	100.00%
Bootstrap support for Q5KJL3 as seed ortholog is 100%.
Bootstrap support for E9J8K5 as seed ortholog is 100%.

Group of orthologs #1169. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:55 S.invicta:51

Q5K8L2              	100.00%		E9IUK5              	100.00%
                    	       		E9IEV6              	84.63%
                    	       		E9IMD8              	48.46%
                    	       		E9IMD9              	47.74%
                    	       		E9IMD7              	33.82%
                    	       		E9IMD6              	30.38%
                    	       		E9IEV7              	21.52%
                    	       		E9J8J2              	14.47%
                    	       		E9IT46              	12.12%
                    	       		E9JCD3              	7.23%
Bootstrap support for Q5K8L2 as seed ortholog is 94%.
Bootstrap support for E9IUK5 as seed ortholog is 89%.

Group of orthologs #1170. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 S.invicta:113

Q5KI55              	100.00%		E9IFV2              	100.00%
Bootstrap support for Q5KI55 as seed ortholog is 100%.
Bootstrap support for E9IFV2 as seed ortholog is 100%.

Group of orthologs #1171. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 S.invicta:63

Q5KGI3              	100.00%		E9IN39              	100.00%
Bootstrap support for Q5KGI3 as seed ortholog is 100%.
Bootstrap support for E9IN39 as seed ortholog is 98%.

Group of orthologs #1172. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 S.invicta:113

Q5KHL3              	100.00%		E9IPX5              	100.00%
Bootstrap support for Q5KHL3 as seed ortholog is 100%.
Bootstrap support for E9IPX5 as seed ortholog is 100%.

Group of orthologs #1173. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:23

Q5KBG0              	100.00%		E9IM47              	100.00%
                    	       		E9J3W7              	29.52%
Bootstrap support for Q5KBG0 as seed ortholog is 100%.
Bootstrap support for E9IM47 as seed ortholog is 51%.
Alternative seed ortholog is E9IHZ0 (23 bits away from this cluster)

Group of orthologs #1174. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:112

Q5KHE9              	100.00%		E9I8P9              	100.00%
Bootstrap support for Q5KHE9 as seed ortholog is 100%.
Bootstrap support for E9I8P9 as seed ortholog is 100%.

Group of orthologs #1175. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:112

Q5KAL3              	100.00%		E9IGS1              	100.00%
Bootstrap support for Q5KAL3 as seed ortholog is 100%.
Bootstrap support for E9IGS1 as seed ortholog is 100%.

Group of orthologs #1176. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:112

Q5KBT9              	100.00%		E9IJX2              	100.00%
Bootstrap support for Q5KBT9 as seed ortholog is 100%.
Bootstrap support for E9IJX2 as seed ortholog is 100%.

Group of orthologs #1177. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:18 S.invicta:112

P0CQ14              	100.00%		E9J2L7              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 67%.
Alternative seed ortholog is Q5KFY5 (18 bits away from this cluster)
Bootstrap support for E9J2L7 as seed ortholog is 100%.

Group of orthologs #1178. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:112

Q5KI04              	100.00%		E9IUH6              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for E9IUH6 as seed ortholog is 100%.

Group of orthologs #1179. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:14

Q5KBR9              	100.00%		E9J8K8              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for E9J8K8 as seed ortholog is 71%.
Alternative seed ortholog is E9IYV5 (14 bits away from this cluster)

Group of orthologs #1180. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 S.invicta:112

Q5KKD7              	100.00%		E9JBV7              	100.00%
Bootstrap support for Q5KKD7 as seed ortholog is 100%.
Bootstrap support for E9JBV7 as seed ortholog is 100%.

Group of orthologs #1181. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:49 S.invicta:60

P0CS54              	100.00%		E9IDJ5              	100.00%
Bootstrap support for P0CS54 as seed ortholog is 85%.
Bootstrap support for E9IDJ5 as seed ortholog is 90%.

Group of orthologs #1182. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KHC7              	100.00%		E9I9P5              	100.00%
Bootstrap support for Q5KHC7 as seed ortholog is 100%.
Bootstrap support for E9I9P5 as seed ortholog is 100%.

Group of orthologs #1183. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KDN0              	100.00%		E9IQA4              	100.00%
Bootstrap support for Q5KDN0 as seed ortholog is 100%.
Bootstrap support for E9IQA4 as seed ortholog is 100%.

Group of orthologs #1184. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5K8N6              	100.00%		E9IUZ2              	100.00%
Bootstrap support for Q5K8N6 as seed ortholog is 100%.
Bootstrap support for E9IUZ2 as seed ortholog is 100%.

Group of orthologs #1185. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KEY6              	100.00%		E9IUD9              	100.00%
Bootstrap support for Q5KEY6 as seed ortholog is 100%.
Bootstrap support for E9IUD9 as seed ortholog is 100%.

Group of orthologs #1186. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KJ00              	100.00%		E9IST8              	100.00%
Bootstrap support for Q5KJ00 as seed ortholog is 100%.
Bootstrap support for E9IST8 as seed ortholog is 100%.

Group of orthologs #1187. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KLZ3              	100.00%		E9IXZ1              	100.00%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for E9IXZ1 as seed ortholog is 100%.

Group of orthologs #1188. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KJP0              	100.00%		E9J0H8              	100.00%
Bootstrap support for Q5KJP0 as seed ortholog is 100%.
Bootstrap support for E9J0H8 as seed ortholog is 100%.

Group of orthologs #1189. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 S.invicta:111

Q5KP80              	100.00%		E9J5W2              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for E9J5W2 as seed ortholog is 100%.

Group of orthologs #1190. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:110

Q5KG49              	100.00%		E9IEL1              	100.00%
Q5KG50              	36.95%		
Bootstrap support for Q5KG49 as seed ortholog is 100%.
Bootstrap support for E9IEL1 as seed ortholog is 100%.

Group of orthologs #1191. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:110

Q5KA76              	100.00%		E9IIQ0              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for E9IIQ0 as seed ortholog is 100%.

Group of orthologs #1192. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:110

Q5KFE4              	100.00%		E9IWW3              	100.00%
Bootstrap support for Q5KFE4 as seed ortholog is 100%.
Bootstrap support for E9IWW3 as seed ortholog is 100%.

Group of orthologs #1193. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:110

Q5K8U2              	100.00%		E9J8Q1              	100.00%
Bootstrap support for Q5K8U2 as seed ortholog is 100%.
Bootstrap support for E9J8Q1 as seed ortholog is 100%.

Group of orthologs #1194. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 S.invicta:110

Q5KBW1              	100.00%		E9JC14              	100.00%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for E9JC14 as seed ortholog is 100%.

Group of orthologs #1195. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 S.invicta:109

Q5K7J8              	100.00%		E9JB12              	100.00%
Q5KGZ2              	13.33%		E9IBE5              	19.19%
Q5K6W3              	7.71%		
Bootstrap support for Q5K7J8 as seed ortholog is 100%.
Bootstrap support for E9JB12 as seed ortholog is 100%.

Group of orthologs #1196. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 S.invicta:109

P0CR80              	100.00%		E9IWH1              	100.00%
Bootstrap support for P0CR80 as seed ortholog is 100%.
Bootstrap support for E9IWH1 as seed ortholog is 100%.

Group of orthologs #1197. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 S.invicta:109

Q5KGL5              	100.00%		E9ITD8              	100.00%
Bootstrap support for Q5KGL5 as seed ortholog is 100%.
Bootstrap support for E9ITD8 as seed ortholog is 100%.

Group of orthologs #1198. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 S.invicta:109

Q5KHF1              	100.00%		E9JCT1              	100.00%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for E9JCT1 as seed ortholog is 100%.

Group of orthologs #1199. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 S.invicta:108

Q5KCK1              	100.00%		E9IK73              	100.00%
Q5K896              	5.96%		
Q5KLC4              	5.02%		
Bootstrap support for Q5KCK1 as seed ortholog is 100%.
Bootstrap support for E9IK73 as seed ortholog is 100%.

Group of orthologs #1200. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 S.invicta:108

Q5KIT3              	100.00%		E9IDT0              	100.00%
Bootstrap support for Q5KIT3 as seed ortholog is 100%.
Bootstrap support for E9IDT0 as seed ortholog is 100%.

Group of orthologs #1201. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 S.invicta:108

Q5KJC8              	100.00%		E9IWW5              	100.00%
Bootstrap support for Q5KJC8 as seed ortholog is 100%.
Bootstrap support for E9IWW5 as seed ortholog is 100%.

Group of orthologs #1202. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:26 S.invicta:108

Q5KFL2              	100.00%		E9J1U6              	100.00%
Bootstrap support for Q5KFL2 as seed ortholog is 75%.
Bootstrap support for E9J1U6 as seed ortholog is 100%.

Group of orthologs #1203. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 S.invicta:108

Q5KPG4              	100.00%		E9IWZ4              	100.00%
Bootstrap support for Q5KPG4 as seed ortholog is 100%.
Bootstrap support for E9IWZ4 as seed ortholog is 100%.

Group of orthologs #1204. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 S.invicta:107

Q5K958              	100.00%		E9IBF3              	100.00%
Bootstrap support for Q5K958 as seed ortholog is 100%.
Bootstrap support for E9IBF3 as seed ortholog is 100%.

Group of orthologs #1205. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 S.invicta:107

Q5KEG9              	100.00%		E9I8B2              	100.00%
Bootstrap support for Q5KEG9 as seed ortholog is 100%.
Bootstrap support for E9I8B2 as seed ortholog is 100%.

Group of orthologs #1206. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:46 S.invicta:51

Q5KEF1              	100.00%		E9IEF8              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 96%.
Bootstrap support for E9IEF8 as seed ortholog is 99%.

Group of orthologs #1207. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 S.invicta:39

Q5KIE5              	100.00%		E9IC58              	100.00%
Bootstrap support for Q5KIE5 as seed ortholog is 100%.
Bootstrap support for E9IC58 as seed ortholog is 98%.

Group of orthologs #1208. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 S.invicta:107

Q5KI13              	100.00%		E9IGT0              	100.00%
Bootstrap support for Q5KI13 as seed ortholog is 100%.
Bootstrap support for E9IGT0 as seed ortholog is 100%.

Group of orthologs #1209. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 S.invicta:107

Q5KFL9              	100.00%		E9JDA0              	100.00%
Bootstrap support for Q5KFL9 as seed ortholog is 100%.
Bootstrap support for E9JDA0 as seed ortholog is 100%.

Group of orthologs #1210. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:20 S.invicta:25

Q5KML8              	100.00%		E9J4W7              	100.00%
Q5KJT3              	27.64%		
Bootstrap support for Q5KML8 as seed ortholog is 76%.
Bootstrap support for E9J4W7 as seed ortholog is 76%.

Group of orthologs #1211. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 S.invicta:106

Q5K9N9              	100.00%		E9IC38              	100.00%
Bootstrap support for Q5K9N9 as seed ortholog is 100%.
Bootstrap support for E9IC38 as seed ortholog is 100%.

Group of orthologs #1212. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 S.invicta:106

Q5KPW9              	100.00%		E9IGR2              	100.00%
Bootstrap support for Q5KPW9 as seed ortholog is 100%.
Bootstrap support for E9IGR2 as seed ortholog is 100%.

Group of orthologs #1213. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 S.invicta:106

Q5KHE4              	100.00%		E9IU56              	100.00%
Bootstrap support for Q5KHE4 as seed ortholog is 100%.
Bootstrap support for E9IU56 as seed ortholog is 100%.

Group of orthologs #1214. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 S.invicta:106

Q5KJ67              	100.00%		E9J4H1              	100.00%
Bootstrap support for Q5KJ67 as seed ortholog is 100%.
Bootstrap support for E9J4H1 as seed ortholog is 100%.

Group of orthologs #1215. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 S.invicta:106

Q5KL68              	100.00%		E9J569              	100.00%
Bootstrap support for Q5KL68 as seed ortholog is 100%.
Bootstrap support for E9J569 as seed ortholog is 100%.

Group of orthologs #1216. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 S.invicta:19

Q5KLA0              	100.00%		E9JD24              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for E9JD24 as seed ortholog is 78%.

Group of orthologs #1217. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:105

P0CQ26              	100.00%		E9IE53              	100.00%
Bootstrap support for P0CQ26 as seed ortholog is 100%.
Bootstrap support for E9IE53 as seed ortholog is 100%.

Group of orthologs #1218. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:105

Q5K8J3              	100.00%		E9IKM0              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for E9IKM0 as seed ortholog is 100%.

Group of orthologs #1219. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:46

Q5K7A3              	100.00%		E9IQB0              	100.00%
Bootstrap support for Q5K7A3 as seed ortholog is 100%.
Bootstrap support for E9IQB0 as seed ortholog is 92%.

Group of orthologs #1220. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:105

Q5KEZ8              	100.00%		E9IIC4              	100.00%
Bootstrap support for Q5KEZ8 as seed ortholog is 100%.
Bootstrap support for E9IIC4 as seed ortholog is 100%.

Group of orthologs #1221. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:105

Q5KKN5              	100.00%		E9IIZ9              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for E9IIZ9 as seed ortholog is 100%.

Group of orthologs #1222. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 S.invicta:105

Q5KNT2              	100.00%		E9J706              	100.00%
Bootstrap support for Q5KNT2 as seed ortholog is 100%.
Bootstrap support for E9J706 as seed ortholog is 100%.

Group of orthologs #1223. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:0 S.invicta:104

Q5KHQ6              	100.00%		E9JCC0              	100.00%
                    	       		E9J7F6              	20.42%
                    	       		E9JC06              	11.36%
Bootstrap support for Q5KHQ6 as seed ortholog is 49%.
Alternative seed ortholog is P0CP68 (0 bits away from this cluster)
Bootstrap support for E9JCC0 as seed ortholog is 100%.

Group of orthologs #1224. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:48 S.invicta:64

Q5KCS6              	100.00%		E9J920              	100.00%
                    	       		E9IG52              	20.95%
Bootstrap support for Q5KCS6 as seed ortholog is 95%.
Bootstrap support for E9J920 as seed ortholog is 98%.

Group of orthologs #1225. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:23 S.invicta:104

P0CR36              	100.00%		E9IJB7              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 78%.
Bootstrap support for E9IJB7 as seed ortholog is 100%.

Group of orthologs #1226. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 S.invicta:104

Q5KGB9              	100.00%		E9IGR5              	100.00%
Bootstrap support for Q5KGB9 as seed ortholog is 100%.
Bootstrap support for E9IGR5 as seed ortholog is 100%.

Group of orthologs #1227. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 S.invicta:104

Q5KCD1              	100.00%		E9IQH2              	100.00%
Bootstrap support for Q5KCD1 as seed ortholog is 100%.
Bootstrap support for E9IQH2 as seed ortholog is 100%.

Group of orthologs #1228. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 S.invicta:104

Q5KKG8              	100.00%		E9J2E3              	100.00%
Bootstrap support for Q5KKG8 as seed ortholog is 100%.
Bootstrap support for E9J2E3 as seed ortholog is 100%.

Group of orthologs #1229. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:103

Q5KEW3              	100.00%		E9IPY4              	100.00%
                    	       		E9IPY5              	29.43%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for E9IPY4 as seed ortholog is 100%.

Group of orthologs #1230. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:103

Q5KBU2              	100.00%		E9IA48              	100.00%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for E9IA48 as seed ortholog is 100%.

Group of orthologs #1231. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:103

Q5K8Z9              	100.00%		E9IQ46              	100.00%
Bootstrap support for Q5K8Z9 as seed ortholog is 100%.
Bootstrap support for E9IQ46 as seed ortholog is 100%.

Group of orthologs #1232. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:103

Q5K889              	100.00%		E9IYN7              	100.00%
Bootstrap support for Q5K889 as seed ortholog is 100%.
Bootstrap support for E9IYN7 as seed ortholog is 100%.

Group of orthologs #1233. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:103

Q5KF35              	100.00%		E9IZJ6              	100.00%
Bootstrap support for Q5KF35 as seed ortholog is 100%.
Bootstrap support for E9IZJ6 as seed ortholog is 100%.

Group of orthologs #1234. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:26

Q5KCF9              	100.00%		E9J3X1              	100.00%
Bootstrap support for Q5KCF9 as seed ortholog is 100%.
Bootstrap support for E9J3X1 as seed ortholog is 59%.
Alternative seed ortholog is E9IXG6 (26 bits away from this cluster)

Group of orthologs #1235. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 S.invicta:103

Q5KF63              	100.00%		E9JDI6              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for E9JDI6 as seed ortholog is 100%.

Group of orthologs #1236. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 S.invicta:102

Q5KDD8              	100.00%		E9IPM2              	100.00%
                    	       		E9IG27              	16.48%
                    	       		E9IPM3              	14.10%
                    	       		E9IG26              	11.73%
                    	       		E9IG25              	10.94%
                    	       		E9J4W2              	9.19%
                    	       		E9IBG1              	8.40%
Bootstrap support for Q5KDD8 as seed ortholog is 100%.
Bootstrap support for E9IPM2 as seed ortholog is 100%.

Group of orthologs #1237. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:21 S.invicta:22

Q5KDM5              	100.00%		E9IA94              	100.00%
Q5KDM8              	100.00%		
Bootstrap support for Q5KDM5 as seed ortholog is 89%.
Bootstrap support for Q5KDM8 as seed ortholog is 87%.
Bootstrap support for E9IA94 as seed ortholog is 78%.

Group of orthologs #1238. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 S.invicta:102

Q5KAB9              	100.00%		E9IAX3              	100.00%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for E9IAX3 as seed ortholog is 100%.

Group of orthologs #1239. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 S.invicta:102

Q5KB50              	100.00%		E9IFC7              	100.00%
Bootstrap support for Q5KB50 as seed ortholog is 100%.
Bootstrap support for E9IFC7 as seed ortholog is 100%.

Group of orthologs #1240. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 S.invicta:102

Q5KCT3              	100.00%		E9IFU5              	100.00%
Bootstrap support for Q5KCT3 as seed ortholog is 100%.
Bootstrap support for E9IFU5 as seed ortholog is 100%.

Group of orthologs #1241. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 S.invicta:102

Q5KCI2              	100.00%		E9IUG4              	100.00%
Bootstrap support for Q5KCI2 as seed ortholog is 100%.
Bootstrap support for E9IUG4 as seed ortholog is 100%.

Group of orthologs #1242. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 S.invicta:102

Q5K8A9              	100.00%		E9JC43              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 100%.
Bootstrap support for E9JC43 as seed ortholog is 100%.

Group of orthologs #1243. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:43 S.invicta:102

Q5K9Z0              	100.00%		E9JD96              	100.00%
Bootstrap support for Q5K9Z0 as seed ortholog is 99%.
Bootstrap support for E9JD96 as seed ortholog is 100%.

Group of orthologs #1244. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:101

Q5KFU9              	100.00%		E9ICH6              	100.00%
Bootstrap support for Q5KFU9 as seed ortholog is 100%.
Bootstrap support for E9ICH6 as seed ortholog is 100%.

Group of orthologs #1245. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:101

Q5KEZ3              	100.00%		E9IFT7              	100.00%
Bootstrap support for Q5KEZ3 as seed ortholog is 100%.
Bootstrap support for E9IFT7 as seed ortholog is 100%.

Group of orthologs #1246. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:101

Q5KDJ4              	100.00%		E9IK04              	100.00%
Bootstrap support for Q5KDJ4 as seed ortholog is 100%.
Bootstrap support for E9IK04 as seed ortholog is 100%.

Group of orthologs #1247. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:101

Q5K8K6              	100.00%		E9J3I8              	100.00%
Bootstrap support for Q5K8K6 as seed ortholog is 100%.
Bootstrap support for E9J3I8 as seed ortholog is 100%.

Group of orthologs #1248. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:101

Q5K7Y3              	100.00%		E9J5Y4              	100.00%
Bootstrap support for Q5K7Y3 as seed ortholog is 100%.
Bootstrap support for E9J5Y4 as seed ortholog is 100%.

Group of orthologs #1249. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 S.invicta:101

Q5KA83              	100.00%		E9J7U3              	100.00%
Bootstrap support for Q5KA83 as seed ortholog is 100%.
Bootstrap support for E9J7U3 as seed ortholog is 100%.

Group of orthologs #1250. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 S.invicta:100

Q5K9C9              	100.00%		E9IHS0              	100.00%
Bootstrap support for Q5K9C9 as seed ortholog is 100%.
Bootstrap support for E9IHS0 as seed ortholog is 100%.

Group of orthologs #1251. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 S.invicta:100

Q5KKC0              	100.00%		E9I889              	100.00%
Bootstrap support for Q5KKC0 as seed ortholog is 100%.
Bootstrap support for E9I889 as seed ortholog is 100%.

Group of orthologs #1252. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:18 S.invicta:18

P0CR62              	100.00%		E9IRA8              	100.00%
Bootstrap support for P0CR62 as seed ortholog is 53%.
Alternative seed ortholog is P0CR64 (18 bits away from this cluster)
Bootstrap support for E9IRA8 as seed ortholog is 63%.
Alternative seed ortholog is E9IV11 (18 bits away from this cluster)

Group of orthologs #1253. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:100

Q5KBR8              	100.00%		E9IUW0              	100.00%
Bootstrap support for Q5KBR8 as seed ortholog is 99%.
Bootstrap support for E9IUW0 as seed ortholog is 100%.

Group of orthologs #1254. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 S.invicta:100

P0CP32              	100.00%		E9J7W1              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for E9J7W1 as seed ortholog is 100%.

Group of orthologs #1255. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 S.invicta:30

Q5KER1              	100.00%		E9IIZ5              	100.00%
Bootstrap support for Q5KER1 as seed ortholog is 100%.
Bootstrap support for E9IIZ5 as seed ortholog is 63%.
Alternative seed ortholog is E9IQG9 (30 bits away from this cluster)

Group of orthologs #1256. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 S.invicta:99

Q5KCS9              	100.00%		E9ISJ5              	100.00%
Bootstrap support for Q5KCS9 as seed ortholog is 100%.
Bootstrap support for E9ISJ5 as seed ortholog is 100%.

Group of orthologs #1257. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 S.invicta:99

P0CS10              	100.00%		E9J4K2              	100.00%
Bootstrap support for P0CS10 as seed ortholog is 100%.
Bootstrap support for E9J4K2 as seed ortholog is 100%.

Group of orthologs #1258. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 S.invicta:98

Q5KIB6              	100.00%		E9IR34              	100.00%
Bootstrap support for Q5KIB6 as seed ortholog is 100%.
Bootstrap support for E9IR34 as seed ortholog is 100%.

Group of orthologs #1259. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 S.invicta:98

Q5KLI5              	100.00%		E9IQA8              	100.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for E9IQA8 as seed ortholog is 100%.

Group of orthologs #1260. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 S.invicta:32

Q5KPK3              	100.00%		E9J3T0              	100.00%
Bootstrap support for Q5KPK3 as seed ortholog is 100%.
Bootstrap support for E9J3T0 as seed ortholog is 99%.

Group of orthologs #1261. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 S.invicta:98

Q5KMQ6              	100.00%		E9J678              	100.00%
Bootstrap support for Q5KMQ6 as seed ortholog is 100%.
Bootstrap support for E9J678 as seed ortholog is 100%.

Group of orthologs #1262. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 S.invicta:97

Q5KFG9              	100.00%		E9IR13              	100.00%
Bootstrap support for Q5KFG9 as seed ortholog is 100%.
Bootstrap support for E9IR13 as seed ortholog is 100%.

Group of orthologs #1263. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 S.invicta:97

Q5KB06              	100.00%		E9J3T6              	100.00%
Bootstrap support for Q5KB06 as seed ortholog is 100%.
Bootstrap support for E9J3T6 as seed ortholog is 100%.

Group of orthologs #1264. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:53 S.invicta:97

Q5KPV0              	100.00%		E9J2W9              	100.00%
Bootstrap support for Q5KPV0 as seed ortholog is 84%.
Bootstrap support for E9J2W9 as seed ortholog is 100%.

Group of orthologs #1265. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 S.invicta:96

Q5KA03              	100.00%		E9J2X4              	100.00%
Q5KPE0              	19.59%		
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for E9J2X4 as seed ortholog is 100%.

Group of orthologs #1266. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:19 S.invicta:96

Q5KH04              	100.00%		E9IAH3              	100.00%
Bootstrap support for Q5KH04 as seed ortholog is 77%.
Bootstrap support for E9IAH3 as seed ortholog is 100%.

Group of orthologs #1267. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 S.invicta:96

Q5K7C8              	100.00%		E9IPS0              	100.00%
Bootstrap support for Q5K7C8 as seed ortholog is 100%.
Bootstrap support for E9IPS0 as seed ortholog is 100%.

Group of orthologs #1268. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 S.invicta:96

Q5K9D0              	100.00%		E9ISS8              	100.00%
Bootstrap support for Q5K9D0 as seed ortholog is 100%.
Bootstrap support for E9ISS8 as seed ortholog is 100%.

Group of orthologs #1269. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:19 S.invicta:95

Q5KB03              	100.00%		E9I9F6              	100.00%
Bootstrap support for Q5KB03 as seed ortholog is 65%.
Alternative seed ortholog is Q5K978 (19 bits away from this cluster)
Bootstrap support for E9I9F6 as seed ortholog is 100%.

Group of orthologs #1270. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 S.invicta:95

Q5KN44              	100.00%		E9IUH7              	100.00%
Bootstrap support for Q5KN44 as seed ortholog is 100%.
Bootstrap support for E9IUH7 as seed ortholog is 100%.

Group of orthologs #1271. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 S.invicta:95

Q5KFH7              	100.00%		E9J4J2              	100.00%
Bootstrap support for Q5KFH7 as seed ortholog is 100%.
Bootstrap support for E9J4J2 as seed ortholog is 100%.

Group of orthologs #1272. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:94

Q5KMM2              	100.00%		E9IUU3              	100.00%
                    	       		E9J590              	10.18%
Bootstrap support for Q5KMM2 as seed ortholog is 100%.
Bootstrap support for E9IUU3 as seed ortholog is 100%.

Group of orthologs #1273. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:94

Q5KDD0              	100.00%		E9IFC1              	100.00%
Bootstrap support for Q5KDD0 as seed ortholog is 100%.
Bootstrap support for E9IFC1 as seed ortholog is 100%.

Group of orthologs #1274. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:94

P0CO54              	100.00%		E9IPV4              	100.00%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for E9IPV4 as seed ortholog is 100%.

Group of orthologs #1275. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:94

Q5KKN1              	100.00%		E9IDU5              	100.00%
Bootstrap support for Q5KKN1 as seed ortholog is 100%.
Bootstrap support for E9IDU5 as seed ortholog is 100%.

Group of orthologs #1276. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:94

Q5K8W3              	100.00%		E9IPQ6              	100.00%
Bootstrap support for Q5K8W3 as seed ortholog is 100%.
Bootstrap support for E9IPQ6 as seed ortholog is 100%.

Group of orthologs #1277. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:8 S.invicta:94

Q5KLM4              	100.00%		E9IL26              	100.00%
Bootstrap support for Q5KLM4 as seed ortholog is 64%.
Alternative seed ortholog is Q5K9C2 (8 bits away from this cluster)
Bootstrap support for E9IL26 as seed ortholog is 100%.

Group of orthologs #1278. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 S.invicta:14

Q5K9G6              	100.00%		E9JD22              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for E9JD22 as seed ortholog is 75%.

Group of orthologs #1279. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:8 S.invicta:16

Q5KJT6              	100.00%		E9J036              	100.00%
                    	       		E9INF9              	5.44%
Bootstrap support for Q5KJT6 as seed ortholog is 57%.
Alternative seed ortholog is Q5KMU8 (8 bits away from this cluster)
Bootstrap support for E9J036 as seed ortholog is 63%.
Alternative seed ortholog is E9IPY2 (16 bits away from this cluster)

Group of orthologs #1280. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 S.invicta:93

Q5KKJ3              	100.00%		E9ICC2              	100.00%
Bootstrap support for Q5KKJ3 as seed ortholog is 100%.
Bootstrap support for E9ICC2 as seed ortholog is 100%.

Group of orthologs #1281. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 S.invicta:93

Q5KDU5              	100.00%		E9IUT4              	100.00%
Bootstrap support for Q5KDU5 as seed ortholog is 100%.
Bootstrap support for E9IUT4 as seed ortholog is 100%.

Group of orthologs #1282. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 S.invicta:93

Q5KPA4              	100.00%		E9IQB8              	100.00%
Bootstrap support for Q5KPA4 as seed ortholog is 100%.
Bootstrap support for E9IQB8 as seed ortholog is 100%.

Group of orthologs #1283. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:10 S.invicta:19

Q5KHN2              	100.00%		E9J352              	29.88%
Q5KM91              	100.00%		E9J4F4              	100.00%
                    	       		E9JBJ6              	10.21%
Bootstrap support for Q5KHN2 as seed ortholog is 60%.
Alternative seed ortholog is Q5K7K2 (10 bits away from this cluster)
Bootstrap support for Q5KM91 as seed ortholog is 60%.
Alternative seed ortholog is Q5K7K2 (10 bits away from this cluster)
Bootstrap support for E9J4F4 as seed ortholog is 66%.
Alternative seed ortholog is E9J466 (19 bits away from this cluster)

Group of orthologs #1284. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:35

Q5KCA8              	100.00%		E9I8R7              	100.00%
Bootstrap support for Q5KCA8 as seed ortholog is 100%.
Bootstrap support for E9I8R7 as seed ortholog is 85%.

Group of orthologs #1285. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5KCS0              	100.00%		E9IB61              	100.00%
Bootstrap support for Q5KCS0 as seed ortholog is 100%.
Bootstrap support for E9IB61 as seed ortholog is 100%.

Group of orthologs #1286. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5KPR9              	100.00%		E9IBV9              	100.00%
Bootstrap support for Q5KPR9 as seed ortholog is 100%.
Bootstrap support for E9IBV9 as seed ortholog is 100%.

Group of orthologs #1287. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5K845              	100.00%		E9IYH9              	100.00%
Bootstrap support for Q5K845 as seed ortholog is 100%.
Bootstrap support for E9IYH9 as seed ortholog is 100%.

Group of orthologs #1288. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5KE53              	100.00%		E9IY43              	100.00%
Bootstrap support for Q5KE53 as seed ortholog is 100%.
Bootstrap support for E9IY43 as seed ortholog is 100%.

Group of orthologs #1289. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5KGZ5              	100.00%		E9J0I8              	100.00%
Bootstrap support for Q5KGZ5 as seed ortholog is 100%.
Bootstrap support for E9J0I8 as seed ortholog is 100%.

Group of orthologs #1290. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:8 S.invicta:92

Q5KJM2              	100.00%		E9IYI2              	100.00%
Bootstrap support for Q5KJM2 as seed ortholog is 62%.
Alternative seed ortholog is Q5KP11 (8 bits away from this cluster)
Bootstrap support for E9IYI2 as seed ortholog is 100%.

Group of orthologs #1291. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5K8A6              	100.00%		E9J939              	100.00%
Bootstrap support for Q5K8A6 as seed ortholog is 100%.
Bootstrap support for E9J939 as seed ortholog is 100%.

Group of orthologs #1292. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 S.invicta:92

Q5KKF2              	100.00%		E9JAB6              	100.00%
Bootstrap support for Q5KKF2 as seed ortholog is 100%.
Bootstrap support for E9JAB6 as seed ortholog is 100%.

Group of orthologs #1293. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 S.invicta:91

Q5KA93              	100.00%		E9ICG8              	100.00%
                    	       		E9ICG5              	50.18%
Bootstrap support for Q5KA93 as seed ortholog is 100%.
Bootstrap support for E9ICG8 as seed ortholog is 100%.

Group of orthologs #1294. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 S.invicta:91

Q5KLS9              	100.00%		E9J902              	100.00%
                    	       		E9IRY0              	36.30%
Bootstrap support for Q5KLS9 as seed ortholog is 100%.
Bootstrap support for E9J902 as seed ortholog is 100%.

Group of orthologs #1295. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 S.invicta:91

P0CN54              	100.00%		E9IWY3              	100.00%
Bootstrap support for P0CN54 as seed ortholog is 100%.
Bootstrap support for E9IWY3 as seed ortholog is 100%.

Group of orthologs #1296. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 S.invicta:91

Q5K6X0              	100.00%		E9IXP8              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 100%.
Bootstrap support for E9IXP8 as seed ortholog is 100%.

Group of orthologs #1297. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 S.invicta:91

Q5KPD3              	100.00%		E9ILY3              	100.00%
Bootstrap support for Q5KPD3 as seed ortholog is 100%.
Bootstrap support for E9ILY3 as seed ortholog is 100%.

Group of orthologs #1298. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 S.invicta:91

Q5KKT3              	100.00%		E9IUN5              	100.00%
Bootstrap support for Q5KKT3 as seed ortholog is 100%.
Bootstrap support for E9IUN5 as seed ortholog is 100%.

Group of orthologs #1299. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:19 S.invicta:28

Q5KK19              	100.00%		E9J092              	100.00%
                    	       		E9JBX4              	49.15%
                    	       		E9IMX5              	41.97%
                    	       		E9IKB9              	36.26%
                    	       		E9JBX3              	30.97%
                    	       		E9IEY9              	27.59%
                    	       		E9IRU6              	24.74%
                    	       		E9IDU4              	23.89%
                    	       		E9IRU5              	22.20%
                    	       		E9J2P7              	21.78%
                    	       		E9ILP1              	20.40%
                    	       		E9JD51              	19.56%
                    	       		E9ILP2              	19.56%
                    	       		E9IRU2              	19.56%
                    	       		E9IRU0              	18.92%
                    	       		E9IAK7              	17.34%
                    	       		E9IVV5              	17.34%
                    	       		E9JD49              	17.34%
                    	       		E9IBU5              	16.70%
                    	       		E9IBU6              	16.60%
                    	       		E9IL06              	14.69%
                    	       		E9IP97              	14.48%
                    	       		E9ITQ7              	14.27%
                    	       		E9JCN6              	5.92%
Bootstrap support for Q5KK19 as seed ortholog is 66%.
Alternative seed ortholog is Q5KQ65 (19 bits away from this cluster)
Bootstrap support for E9J092 as seed ortholog is 75%.

Group of orthologs #1300. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 S.invicta:90

Q5KMJ0              	100.00%		E9IFW8              	100.00%
Bootstrap support for Q5KMJ0 as seed ortholog is 100%.
Bootstrap support for E9IFW8 as seed ortholog is 100%.

Group of orthologs #1301. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 S.invicta:90

Q5KIY8              	100.00%		E9IMF5              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for E9IMF5 as seed ortholog is 100%.

Group of orthologs #1302. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 S.invicta:90

Q5KLZ6              	100.00%		E9IK56              	100.00%
Bootstrap support for Q5KLZ6 as seed ortholog is 100%.
Bootstrap support for E9IK56 as seed ortholog is 100%.

Group of orthologs #1303. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 S.invicta:90

Q5KLV4              	100.00%		E9IRQ5              	100.00%
Bootstrap support for Q5KLV4 as seed ortholog is 100%.
Bootstrap support for E9IRQ5 as seed ortholog is 100%.

Group of orthologs #1304. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 S.invicta:90

Q5KHA3              	100.00%		E9IZ70              	100.00%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for E9IZ70 as seed ortholog is 100%.

Group of orthologs #1305. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 S.invicta:89

Q5KDJ5              	100.00%		E9ILI6              	100.00%
                    	       		E9IU68              	66.16%
                    	       		E9JAV4              	37.75%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for E9ILI6 as seed ortholog is 100%.

Group of orthologs #1306. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 S.invicta:89

P0CN70              	100.00%		E9IFU4              	100.00%
Bootstrap support for P0CN70 as seed ortholog is 100%.
Bootstrap support for E9IFU4 as seed ortholog is 100%.

Group of orthologs #1307. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 S.invicta:89

Q5KFF8              	100.00%		E9IUT5              	100.00%
Bootstrap support for Q5KFF8 as seed ortholog is 100%.
Bootstrap support for E9IUT5 as seed ortholog is 100%.

Group of orthologs #1308. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 S.invicta:89

Q5KKH4              	100.00%		E9IT77              	100.00%
Bootstrap support for Q5KKH4 as seed ortholog is 100%.
Bootstrap support for E9IT77 as seed ortholog is 100%.

Group of orthologs #1309. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 S.invicta:4

Q5KLB1              	100.00%		E9J1I3              	100.00%
Bootstrap support for Q5KLB1 as seed ortholog is 100%.
Bootstrap support for E9J1I3 as seed ortholog is 52%.
Alternative seed ortholog is E9ILP7 (4 bits away from this cluster)

Group of orthologs #1310. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:17 S.invicta:88

Q5K883              	100.00%		E9ICQ2              	100.00%
Q5KC67              	33.18%		
Q5KEQ8              	15.96%		
Bootstrap support for Q5K883 as seed ortholog is 70%.
Alternative seed ortholog is Q5KFZ5 (17 bits away from this cluster)
Bootstrap support for E9ICQ2 as seed ortholog is 100%.

Group of orthologs #1311. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:88

P0CM06              	100.00%		E9IFT6              	100.00%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for E9IFT6 as seed ortholog is 100%.

Group of orthologs #1312. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:88

Q5KCM4              	100.00%		E9IIJ1              	100.00%
Bootstrap support for Q5KCM4 as seed ortholog is 100%.
Bootstrap support for E9IIJ1 as seed ortholog is 100%.

Group of orthologs #1313. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:88

Q5KAQ5              	100.00%		E9IXM6              	100.00%
Bootstrap support for Q5KAQ5 as seed ortholog is 100%.
Bootstrap support for E9IXM6 as seed ortholog is 100%.

Group of orthologs #1314. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:88

Q5K900              	100.00%		E9J1S2              	100.00%
Bootstrap support for Q5K900 as seed ortholog is 100%.
Bootstrap support for E9J1S2 as seed ortholog is 100%.

Group of orthologs #1315. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:88

Q5KIT8              	100.00%		E9J504              	100.00%
Bootstrap support for Q5KIT8 as seed ortholog is 100%.
Bootstrap support for E9J504 as seed ortholog is 100%.

Group of orthologs #1316. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 S.invicta:88

Q5KMB4              	100.00%		E9J3R3              	100.00%
Bootstrap support for Q5KMB4 as seed ortholog is 100%.
Bootstrap support for E9J3R3 as seed ortholog is 100%.

Group of orthologs #1317. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:14 S.invicta:87

Q5K856              	100.00%		E9IDH3              	100.00%
Q5KLZ1              	8.25%		
Bootstrap support for Q5K856 as seed ortholog is 48%.
Alternative seed ortholog is Q5K9C2 (14 bits away from this cluster)
Bootstrap support for E9IDH3 as seed ortholog is 100%.

Group of orthologs #1318. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:14 S.invicta:87

P0CN72              	100.00%		E9IBD7              	100.00%
Bootstrap support for P0CN72 as seed ortholog is 67%.
Alternative seed ortholog is Q5KHV8 (14 bits away from this cluster)
Bootstrap support for E9IBD7 as seed ortholog is 100%.

Group of orthologs #1319. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 S.invicta:87

P0CO30              	100.00%		E9IJS6              	100.00%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for E9IJS6 as seed ortholog is 100%.

Group of orthologs #1320. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:40 S.invicta:87

Q5KC84              	100.00%		E9IK26              	100.00%
Bootstrap support for Q5KC84 as seed ortholog is 89%.
Bootstrap support for E9IK26 as seed ortholog is 100%.

Group of orthologs #1321. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:33 S.invicta:87

Q5KLI2              	100.00%		E9IE08              	100.00%
Bootstrap support for Q5KLI2 as seed ortholog is 51%.
Alternative seed ortholog is Q5KAX6 (33 bits away from this cluster)
Bootstrap support for E9IE08 as seed ortholog is 100%.

Group of orthologs #1322. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 S.invicta:87

Q5KJY3              	100.00%		E9IGV4              	100.00%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for E9IGV4 as seed ortholog is 100%.

Group of orthologs #1323. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 S.invicta:87

Q5K811              	100.00%		E9J1A9              	100.00%
Bootstrap support for Q5K811 as seed ortholog is 100%.
Bootstrap support for E9J1A9 as seed ortholog is 100%.

Group of orthologs #1324. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 S.invicta:87

Q5KI10              	100.00%		E9J4W6              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for E9J4W6 as seed ortholog is 100%.

Group of orthologs #1325. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:86

Q5K7N6              	100.00%		E9IH01              	100.00%
Bootstrap support for Q5K7N6 as seed ortholog is 100%.
Bootstrap support for E9IH01 as seed ortholog is 100%.

Group of orthologs #1326. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:86

Q5KL91              	100.00%		E9IDI0              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for E9IDI0 as seed ortholog is 100%.

Group of orthologs #1327. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:86

Q5KMS8              	100.00%		E9IVU8              	100.00%
Bootstrap support for Q5KMS8 as seed ortholog is 100%.
Bootstrap support for E9IVU8 as seed ortholog is 100%.

Group of orthologs #1328. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 S.invicta:86

Q5KMX2              	100.00%		E9J9R8              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 100%.
Bootstrap support for E9J9R8 as seed ortholog is 100%.

Group of orthologs #1329. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 S.invicta:85

Q5KEY9              	100.00%		E9J6D8              	100.00%
                    	       		E9IAI2              	66.54%
                    	       		E9IAI1              	65.97%
                    	       		E9IAI0              	65.21%
                    	       		E9J7W6              	33.84%
                    	       		E9J0E2              	31.37%
                    	       		E9J846              	26.62%
                    	       		E9IH96              	24.52%
                    	       		E9J6A7              	14.26%
                    	       		E9ITX2              	11.60%
                    	       		E9J8G5              	10.65%
                    	       		E9IIS6              	8.37%
Bootstrap support for Q5KEY9 as seed ortholog is 100%.
Bootstrap support for E9J6D8 as seed ortholog is 100%.

Group of orthologs #1330. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 S.invicta:85

Q5K9E5              	100.00%		E9IZB2              	100.00%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for E9IZB2 as seed ortholog is 100%.

Group of orthologs #1331. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:14 S.invicta:32

Q5KQ67              	100.00%		E9JB38              	100.00%
Bootstrap support for Q5KQ67 as seed ortholog is 68%.
Alternative seed ortholog is Q5K8L0 (14 bits away from this cluster)
Bootstrap support for E9JB38 as seed ortholog is 84%.

Group of orthologs #1332. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

P0CM42              	100.00%		E9IL79              	100.00%
Bootstrap support for P0CM42 as seed ortholog is 100%.
Bootstrap support for E9IL79 as seed ortholog is 100%.

Group of orthologs #1333. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

P0CS68              	100.00%		E9IMW7              	100.00%
Bootstrap support for P0CS68 as seed ortholog is 100%.
Bootstrap support for E9IMW7 as seed ortholog is 100%.

Group of orthologs #1334. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

Q5KJZ8              	100.00%		E9IBB7              	100.00%
Bootstrap support for Q5KJZ8 as seed ortholog is 100%.
Bootstrap support for E9IBB7 as seed ortholog is 100%.

Group of orthologs #1335. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

P0CR88              	100.00%		E9IRW3              	100.00%
Bootstrap support for P0CR88 as seed ortholog is 100%.
Bootstrap support for E9IRW3 as seed ortholog is 100%.

Group of orthologs #1336. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

Q5KIY1              	100.00%		E9IIK3              	100.00%
Bootstrap support for Q5KIY1 as seed ortholog is 100%.
Bootstrap support for E9IIK3 as seed ortholog is 100%.

Group of orthologs #1337. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

Q5KIV2              	100.00%		E9IWP2              	100.00%
Bootstrap support for Q5KIV2 as seed ortholog is 100%.
Bootstrap support for E9IWP2 as seed ortholog is 100%.

Group of orthologs #1338. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

Q5KMD5              	100.00%		E9IWP9              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for E9IWP9 as seed ortholog is 100%.

Group of orthologs #1339. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

P0CS00              	100.00%		E9JD81              	100.00%
Bootstrap support for P0CS00 as seed ortholog is 100%.
Bootstrap support for E9JD81 as seed ortholog is 100%.

Group of orthologs #1340. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 S.invicta:84

Q5KLV6              	100.00%		E9J4X3              	100.00%
Bootstrap support for Q5KLV6 as seed ortholog is 100%.
Bootstrap support for E9J4X3 as seed ortholog is 100%.

Group of orthologs #1341. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 S.invicta:83

Q5KQ66              	100.00%		E9IK68              	100.00%
                    	       		E9J2M9              	10.30%
                    	       		E9IWN7              	5.99%
Bootstrap support for Q5KQ66 as seed ortholog is 100%.
Bootstrap support for E9IK68 as seed ortholog is 100%.

Group of orthologs #1342. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 S.invicta:83

Q5KID6              	100.00%		E9IMJ1              	100.00%
Bootstrap support for Q5KID6 as seed ortholog is 100%.
Bootstrap support for E9IMJ1 as seed ortholog is 100%.

Group of orthologs #1343. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 S.invicta:83

Q5KDF1              	100.00%		E9IVH1              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for E9IVH1 as seed ortholog is 100%.

Group of orthologs #1344. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:82

Q5KE91              	100.00%		E9IHP2              	100.00%
                    	       		E9J136              	28.57%
                    	       		E9J4B5              	27.36%
Bootstrap support for Q5KE91 as seed ortholog is 100%.
Bootstrap support for E9IHP2 as seed ortholog is 100%.

Group of orthologs #1345. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:82

Q5K7D5              	100.00%		E9IJA1              	100.00%
                    	       		E9ISG7              	76.23%
Bootstrap support for Q5K7D5 as seed ortholog is 100%.
Bootstrap support for E9IJA1 as seed ortholog is 100%.

Group of orthologs #1346. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:82

Q5K8D9              	100.00%		E9IK37              	100.00%
Bootstrap support for Q5K8D9 as seed ortholog is 100%.
Bootstrap support for E9IK37 as seed ortholog is 100%.

Group of orthologs #1347. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:7 S.invicta:82

Q5KLT4              	100.00%		E9I8Q3              	100.00%
Bootstrap support for Q5KLT4 as seed ortholog is 52%.
Alternative seed ortholog is Q5KJZ1 (7 bits away from this cluster)
Bootstrap support for E9I8Q3 as seed ortholog is 100%.

Group of orthologs #1348. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:82

Q5KL25              	100.00%		E9IE65              	100.00%
Bootstrap support for Q5KL25 as seed ortholog is 100%.
Bootstrap support for E9IE65 as seed ortholog is 100%.

Group of orthologs #1349. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:82

Q5KNF1              	100.00%		E9IYQ6              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for E9IYQ6 as seed ortholog is 100%.

Group of orthologs #1350. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 S.invicta:82

Q5KGD9              	100.00%		E9J5Y5              	100.00%
Bootstrap support for Q5KGD9 as seed ortholog is 100%.
Bootstrap support for E9J5Y5 as seed ortholog is 100%.

Group of orthologs #1351. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:81

Q5KF12              	100.00%		E9IEB9              	100.00%
Bootstrap support for Q5KF12 as seed ortholog is 100%.
Bootstrap support for E9IEB9 as seed ortholog is 100%.

Group of orthologs #1352. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:81

Q5KBN5              	100.00%		E9IJM2              	100.00%
Bootstrap support for Q5KBN5 as seed ortholog is 100%.
Bootstrap support for E9IJM2 as seed ortholog is 100%.

Group of orthologs #1353. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:81

Q5KK48              	100.00%		E9II28              	100.00%
Bootstrap support for Q5KK48 as seed ortholog is 100%.
Bootstrap support for E9II28 as seed ortholog is 100%.

Group of orthologs #1354. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:81

P0CP46              	100.00%		E9J5K5              	100.00%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for E9J5K5 as seed ortholog is 100%.

Group of orthologs #1355. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:81

Q5KEV9              	100.00%		E9J279              	100.00%
Bootstrap support for Q5KEV9 as seed ortholog is 100%.
Bootstrap support for E9J279 as seed ortholog is 100%.

Group of orthologs #1356. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 S.invicta:81

Q5KPQ5              	100.00%		E9J8J5              	100.00%
Bootstrap support for Q5KPQ5 as seed ortholog is 100%.
Bootstrap support for E9J8J5 as seed ortholog is 100%.

Group of orthologs #1357. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 S.invicta:36

Q5K7H9              	100.00%		E9IAR1              	100.00%
                    	       		E9IBL2              	21.03%
Bootstrap support for Q5K7H9 as seed ortholog is 100%.
Bootstrap support for E9IAR1 as seed ortholog is 86%.

Group of orthologs #1358. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:26 S.invicta:80

Q5KLT2              	100.00%		E9IL25              	100.00%
                    	       		E9IFF4              	42.75%
Bootstrap support for Q5KLT2 as seed ortholog is 93%.
Bootstrap support for E9IL25 as seed ortholog is 100%.

Group of orthologs #1359. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:10 S.invicta:80

Q5KL07              	100.00%		E9IEF1              	100.00%
Bootstrap support for Q5KL07 as seed ortholog is 67%.
Alternative seed ortholog is Q5KK55 (10 bits away from this cluster)
Bootstrap support for E9IEF1 as seed ortholog is 100%.

Group of orthologs #1360. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 S.invicta:80

Q5KMP1              	100.00%		E9IDE6              	100.00%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for E9IDE6 as seed ortholog is 100%.

Group of orthologs #1361. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 S.invicta:79

P0CS04              	100.00%		E9IJM0              	100.00%
P0CS02              	57.07%		
Bootstrap support for P0CS04 as seed ortholog is 100%.
Bootstrap support for E9IJM0 as seed ortholog is 100%.

Group of orthologs #1362. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 S.invicta:79

Q5KA95              	100.00%		E9IDM3              	100.00%
Bootstrap support for Q5KA95 as seed ortholog is 100%.
Bootstrap support for E9IDM3 as seed ortholog is 100%.

Group of orthologs #1363. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:27 S.invicta:79

Q5KF26              	100.00%		E9IT01              	100.00%
Bootstrap support for Q5KF26 as seed ortholog is 74%.
Alternative seed ortholog is Q5K7V7 (27 bits away from this cluster)
Bootstrap support for E9IT01 as seed ortholog is 100%.

Group of orthologs #1364. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 S.invicta:79

Q5KD61              	100.00%		E9IWP1              	100.00%
Bootstrap support for Q5KD61 as seed ortholog is 100%.
Bootstrap support for E9IWP1 as seed ortholog is 100%.

Group of orthologs #1365. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 S.invicta:79

Q5KF28              	100.00%		E9IX25              	100.00%
Bootstrap support for Q5KF28 as seed ortholog is 100%.
Bootstrap support for E9IX25 as seed ortholog is 100%.

Group of orthologs #1366. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 S.invicta:79

Q5KGT2              	100.00%		E9J5E8              	100.00%
Bootstrap support for Q5KGT2 as seed ortholog is 100%.
Bootstrap support for E9J5E8 as seed ortholog is 100%.

Group of orthologs #1367. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 S.invicta:78

Q5K7J0              	100.00%		E9IB67              	100.00%
Bootstrap support for Q5K7J0 as seed ortholog is 100%.
Bootstrap support for E9IB67 as seed ortholog is 100%.

Group of orthologs #1368. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 S.invicta:78

Q5K8Y4              	100.00%		E9ISY9              	100.00%
Bootstrap support for Q5K8Y4 as seed ortholog is 100%.
Bootstrap support for E9ISY9 as seed ortholog is 100%.

Group of orthologs #1369. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:11 S.invicta:78

Q5KKK4              	100.00%		E9IKT2              	100.00%
Bootstrap support for Q5KKK4 as seed ortholog is 51%.
Alternative seed ortholog is Q5KP22 (11 bits away from this cluster)
Bootstrap support for E9IKT2 as seed ortholog is 100%.

Group of orthologs #1370. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 S.invicta:78

Q5KLV3              	100.00%		E9IJW3              	100.00%
Bootstrap support for Q5KLV3 as seed ortholog is 100%.
Bootstrap support for E9IJW3 as seed ortholog is 100%.

Group of orthologs #1371. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 S.invicta:77

P0CR32              	100.00%		E9IA50              	100.00%
Bootstrap support for P0CR32 as seed ortholog is 100%.
Bootstrap support for E9IA50 as seed ortholog is 100%.

Group of orthologs #1372. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 S.invicta:77

Q5K8X7              	100.00%		E9IN17              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for E9IN17 as seed ortholog is 100%.

Group of orthologs #1373. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 S.invicta:77

Q5KHC1              	100.00%		E9J588              	100.00%
Bootstrap support for Q5KHC1 as seed ortholog is 100%.
Bootstrap support for E9J588 as seed ortholog is 100%.

Group of orthologs #1374. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 S.invicta:77

Q5KF36              	100.00%		E9JBS7              	100.00%
Bootstrap support for Q5KF36 as seed ortholog is 100%.
Bootstrap support for E9JBS7 as seed ortholog is 100%.

Group of orthologs #1375. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 S.invicta:77

Q5KDU9              	100.00%		E9JDA9              	100.00%
Bootstrap support for Q5KDU9 as seed ortholog is 100%.
Bootstrap support for E9JDA9 as seed ortholog is 100%.

Group of orthologs #1376. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 S.invicta:77

Q5KN02              	100.00%		E9J903              	100.00%
Bootstrap support for Q5KN02 as seed ortholog is 100%.
Bootstrap support for E9J903 as seed ortholog is 100%.

Group of orthologs #1377. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KJP3              	100.00%		E9IAA1              	100.00%
Bootstrap support for Q5KJP3 as seed ortholog is 100%.
Bootstrap support for E9IAA1 as seed ortholog is 100%.

Group of orthologs #1378. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KL85              	100.00%		E9IBL4              	100.00%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for E9IBL4 as seed ortholog is 100%.

Group of orthologs #1379. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KL55              	100.00%		E9IQ53              	100.00%
Bootstrap support for Q5KL55 as seed ortholog is 100%.
Bootstrap support for E9IQ53 as seed ortholog is 100%.

Group of orthologs #1380. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5K8Y9              	100.00%		E9J4J6              	100.00%
Bootstrap support for Q5K8Y9 as seed ortholog is 100%.
Bootstrap support for E9J4J6 as seed ortholog is 100%.

Group of orthologs #1381. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KJ70              	100.00%		E9IW74              	100.00%
Bootstrap support for Q5KJ70 as seed ortholog is 100%.
Bootstrap support for E9IW74 as seed ortholog is 100%.

Group of orthologs #1382. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:13 S.invicta:76

Q5KMJ1              	100.00%		E9J0X7              	100.00%
Bootstrap support for Q5KMJ1 as seed ortholog is 40%.
Alternative seed ortholog is Q5KCX6 (13 bits away from this cluster)
Bootstrap support for E9J0X7 as seed ortholog is 100%.

Group of orthologs #1383. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KK86              	100.00%		E9J600              	100.00%
Bootstrap support for Q5KK86 as seed ortholog is 100%.
Bootstrap support for E9J600 as seed ortholog is 100%.

Group of orthologs #1384. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KHN8              	100.00%		E9JCP7              	100.00%
Bootstrap support for Q5KHN8 as seed ortholog is 100%.
Bootstrap support for E9JCP7 as seed ortholog is 100%.

Group of orthologs #1385. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 S.invicta:76

Q5KI50              	100.00%		E9JDI0              	100.00%
Bootstrap support for Q5KI50 as seed ortholog is 100%.
Bootstrap support for E9JDI0 as seed ortholog is 100%.

Group of orthologs #1386. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 S.invicta:75

P0CO24              	100.00%		E9II64              	100.00%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for E9II64 as seed ortholog is 100%.

Group of orthologs #1387. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 S.invicta:75

P0CN38              	100.00%		E9J398              	100.00%
Bootstrap support for P0CN38 as seed ortholog is 100%.
Bootstrap support for E9J398 as seed ortholog is 100%.

Group of orthologs #1388. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 S.invicta:75

P0CP72              	100.00%		E9JBC5              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for E9JBC5 as seed ortholog is 100%.

Group of orthologs #1389. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:74

Q5KGT0              	100.00%		E9IS27              	100.00%
Q5K977              	49.42%		E9IWT2              	13.56%
Bootstrap support for Q5KGT0 as seed ortholog is 100%.
Bootstrap support for E9IS27 as seed ortholog is 100%.

Group of orthologs #1390. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:74

Q5KA20              	100.00%		E9ICB7              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 100%.
Bootstrap support for E9ICB7 as seed ortholog is 100%.

Group of orthologs #1391. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:74

Q5KBY4              	100.00%		E9ILF0              	100.00%
Bootstrap support for Q5KBY4 as seed ortholog is 100%.
Bootstrap support for E9ILF0 as seed ortholog is 100%.

Group of orthologs #1392. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 S.invicta:74

Q5KGC9              	100.00%		E9IN26              	100.00%
Bootstrap support for Q5KGC9 as seed ortholog is 100%.
Bootstrap support for E9IN26 as seed ortholog is 100%.

Group of orthologs #1393. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:14 S.invicta:20

P0CQ38              	100.00%		E9J559              	100.00%
Bootstrap support for P0CQ38 as seed ortholog is 68%.
Alternative seed ortholog is Q5K8I2 (14 bits away from this cluster)
Bootstrap support for E9J559 as seed ortholog is 83%.

Group of orthologs #1394. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 S.invicta:73

Q5K7L4              	100.00%		E9IHE6              	100.00%
Q5KI02              	100.00%		E9IPF4              	100.00%
Q5KHX6              	100.00%		E9IED7              	100.00%
Q5K984              	100.00%		E9IVV3              	100.00%
Q5KEI1              	100.00%		E9IA65              	100.00%
Q5KHF5              	71.28%		E9J662              	32.00%
Q5KNB7              	25.89%		E9IV65              	26.29%
Q5K9X4              	23.43%		E9J4V4              	24.50%
Q5KG03              	21.46%		E9ILU0              	23.55%
Q5KAT7              	20.18%		E9IVY5              	9.90%
Q5KNP3              	19.78%		
Q5KKU1              	19.38%		
Q5KQ74              	18.91%		
Q5K7A1              	17.82%		
Q5KPG5              	15.87%		
Q5KBM4              	15.36%		
Q5K9T2              	15.00%		
Q5KKS6              	14.80%		
Q5KA87              	14.56%		
Q5K875              	14.51%		
Q5K7F5              	14.05%		
Q5K886              	13.95%		
Q5KBE7              	13.05%		
Q5KC55              	12.85%		
Q5KN93              	10.03%		
Q5K860              	9.54%		
Q5KEM4              	9.15%		
Q5KA09              	8.96%		
Q5KNV0              	8.96%		
Q5K928              	8.57%		
Q5KGY8              	5.72%		
Bootstrap support for Q5K7L4 as seed ortholog is 100%.
Bootstrap support for Q5KI02 as seed ortholog is 100%.
Bootstrap support for Q5KHX6 as seed ortholog is 100%.
Bootstrap support for Q5K984 as seed ortholog is 100%.
Bootstrap support for Q5KEI1 as seed ortholog is 100%.
Bootstrap support for E9IHE6 as seed ortholog is 100%.
Bootstrap support for E9IPF4 as seed ortholog is 100%.
Bootstrap support for E9IED7 as seed ortholog is 100%.
Bootstrap support for E9IVV3 as seed ortholog is 100%.
Bootstrap support for E9IA65 as seed ortholog is 100%.

Group of orthologs #1395. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 S.invicta:73

Q5KJS3              	100.00%		E9J8X1              	100.00%
Q5KEM2              	29.93%		E9IIG1              	11.11%
Q5K9K0              	5.10%		
Bootstrap support for Q5KJS3 as seed ortholog is 100%.
Bootstrap support for E9J8X1 as seed ortholog is 100%.

Group of orthologs #1396. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 S.invicta:73

Q5KKY6              	100.00%		E9IF49              	100.00%
                    	       		E9IMW4              	9.98%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for E9IF49 as seed ortholog is 100%.

Group of orthologs #1397. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 S.invicta:73

Q5KP66              	100.00%		E9INA5              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for E9INA5 as seed ortholog is 100%.

Group of orthologs #1398. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 S.invicta:72

Q5KHU0              	100.00%		E9IM33              	100.00%
Q5KHX8              	100.00%		
Bootstrap support for Q5KHU0 as seed ortholog is 100%.
Bootstrap support for Q5KHX8 as seed ortholog is 100%.
Bootstrap support for E9IM33 as seed ortholog is 100%.

Group of orthologs #1399. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 S.invicta:72

Q5KHE7              	100.00%		E9J689              	100.00%
Q5KEI5              	41.09%		
Bootstrap support for Q5KHE7 as seed ortholog is 100%.
Bootstrap support for E9J689 as seed ortholog is 100%.

Group of orthologs #1400. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

Q5KCL2              	100.00%		E9ITL8              	100.00%
                    	       		E9JA85              	28.25%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for E9ITL8 as seed ortholog is 100%.

Group of orthologs #1401. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

P0CL90              	100.00%		E9IRN5              	100.00%
Bootstrap support for P0CL90 as seed ortholog is 100%.
Bootstrap support for E9IRN5 as seed ortholog is 100%.

Group of orthologs #1402. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

Q5KQ37              	100.00%		E9I9G9              	100.00%
Bootstrap support for Q5KQ37 as seed ortholog is 100%.
Bootstrap support for E9I9G9 as seed ortholog is 100%.

Group of orthologs #1403. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

Q5KDG2              	100.00%		E9INK9              	100.00%
Bootstrap support for Q5KDG2 as seed ortholog is 100%.
Bootstrap support for E9INK9 as seed ortholog is 100%.

Group of orthologs #1404. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

Q5KNI8              	100.00%		E9IMM5              	100.00%
Bootstrap support for Q5KNI8 as seed ortholog is 100%.
Bootstrap support for E9IMM5 as seed ortholog is 100%.

Group of orthologs #1405. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:30

Q5KM51              	100.00%		E9IW27              	100.00%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for E9IW27 as seed ortholog is 74%.
Alternative seed ortholog is E9IE77 (30 bits away from this cluster)

Group of orthologs #1406. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

Q5KKF3              	100.00%		E9IYY0              	100.00%
Bootstrap support for Q5KKF3 as seed ortholog is 100%.
Bootstrap support for E9IYY0 as seed ortholog is 100%.

Group of orthologs #1407. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 S.invicta:71

Q5KJE8              	100.00%		E9J2L0              	100.00%
Bootstrap support for Q5KJE8 as seed ortholog is 100%.
Bootstrap support for E9J2L0 as seed ortholog is 100%.

Group of orthologs #1408. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KD71              	100.00%		E9ICR0              	100.00%
Bootstrap support for Q5KD71 as seed ortholog is 100%.
Bootstrap support for E9ICR0 as seed ortholog is 100%.

Group of orthologs #1409. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KFZ6              	100.00%		E9IAB9              	100.00%
Bootstrap support for Q5KFZ6 as seed ortholog is 100%.
Bootstrap support for E9IAB9 as seed ortholog is 100%.

Group of orthologs #1410. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KCR0              	100.00%		E9IET0              	100.00%
Bootstrap support for Q5KCR0 as seed ortholog is 100%.
Bootstrap support for E9IET0 as seed ortholog is 100%.

Group of orthologs #1411. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KMV9              	100.00%		E9I937              	100.00%
Bootstrap support for Q5KMV9 as seed ortholog is 100%.
Bootstrap support for E9I937 as seed ortholog is 100%.

Group of orthologs #1412. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KPF0              	100.00%		E9IEN0              	100.00%
Bootstrap support for Q5KPF0 as seed ortholog is 100%.
Bootstrap support for E9IEN0 as seed ortholog is 100%.

Group of orthologs #1413. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

P0CR98              	100.00%		E9J336              	100.00%
Bootstrap support for P0CR98 as seed ortholog is 100%.
Bootstrap support for E9J336 as seed ortholog is 100%.

Group of orthologs #1414. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KGS8              	100.00%		E9IUQ2              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for E9IUQ2 as seed ortholog is 100%.

Group of orthologs #1415. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 S.invicta:70

Q5KCH4              	100.00%		E9IZ62              	100.00%
Bootstrap support for Q5KCH4 as seed ortholog is 100%.
Bootstrap support for E9IZ62 as seed ortholog is 100%.

Group of orthologs #1416. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:23 S.invicta:70

Q5KAA3              	100.00%		E9J270              	100.00%
Bootstrap support for Q5KAA3 as seed ortholog is 75%.
Bootstrap support for E9J270 as seed ortholog is 100%.

Group of orthologs #1417. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 S.invicta:69

Q5KFB2              	100.00%		E9I8D3              	100.00%
Bootstrap support for Q5KFB2 as seed ortholog is 100%.
Bootstrap support for E9I8D3 as seed ortholog is 100%.

Group of orthologs #1418. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 S.invicta:69

P0CN88              	100.00%		E9J1L5              	100.00%
Bootstrap support for P0CN88 as seed ortholog is 100%.
Bootstrap support for E9J1L5 as seed ortholog is 100%.

Group of orthologs #1419. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 S.invicta:69

Q5KNH1              	100.00%		E9IPN1              	100.00%
Bootstrap support for Q5KNH1 as seed ortholog is 100%.
Bootstrap support for E9IPN1 as seed ortholog is 100%.

Group of orthologs #1420. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 S.invicta:68

Q5K9W5              	100.00%		E9J609              	100.00%
Bootstrap support for Q5K9W5 as seed ortholog is 100%.
Bootstrap support for E9J609 as seed ortholog is 100%.

Group of orthologs #1421. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 S.invicta:68

Q5KPM7              	100.00%		E9J1W2              	100.00%
Bootstrap support for Q5KPM7 as seed ortholog is 100%.
Bootstrap support for E9J1W2 as seed ortholog is 100%.

Group of orthologs #1422. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5K7Z6              	100.00%		E9JA77              	100.00%
                    	       		E9I8J5              	19.97%
                    	       		E9IUJ4              	16.04%
                    	       		E9II35              	13.21%
                    	       		E9IKI3              	12.74%
                    	       		E9J7D8              	11.95%
                    	       		E9J895              	9.59%
Bootstrap support for Q5K7Z6 as seed ortholog is 100%.
Bootstrap support for E9JA77 as seed ortholog is 100%.

Group of orthologs #1423. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:11 S.invicta:67

Q5KK76              	100.00%		E9IK31              	100.00%
Q5KDS4              	16.20%		
Q5KBM7              	9.88%		
Bootstrap support for Q5KK76 as seed ortholog is 70%.
Alternative seed ortholog is Q5KA86 (11 bits away from this cluster)
Bootstrap support for E9IK31 as seed ortholog is 100%.

Group of orthologs #1424. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

P0CM94              	100.00%		E9ID28              	100.00%
Bootstrap support for P0CM94 as seed ortholog is 100%.
Bootstrap support for E9ID28 as seed ortholog is 100%.

Group of orthologs #1425. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5K8K2              	100.00%		E9IGR3              	100.00%
Bootstrap support for Q5K8K2 as seed ortholog is 100%.
Bootstrap support for E9IGR3 as seed ortholog is 100%.

Group of orthologs #1426. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KJN7              	100.00%		E9IBS8              	100.00%
Bootstrap support for Q5KJN7 as seed ortholog is 100%.
Bootstrap support for E9IBS8 as seed ortholog is 100%.

Group of orthologs #1427. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KBI3              	100.00%		E9IL11              	100.00%
Bootstrap support for Q5KBI3 as seed ortholog is 100%.
Bootstrap support for E9IL11 as seed ortholog is 100%.

Group of orthologs #1428. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KAI3              	100.00%		E9IVB5              	100.00%
Bootstrap support for Q5KAI3 as seed ortholog is 100%.
Bootstrap support for E9IVB5 as seed ortholog is 100%.

Group of orthologs #1429. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KLY9              	100.00%		E9IQK9              	100.00%
Bootstrap support for Q5KLY9 as seed ortholog is 100%.
Bootstrap support for E9IQK9 as seed ortholog is 100%.

Group of orthologs #1430. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5K727              	100.00%		E9JCV6              	100.00%
Bootstrap support for Q5K727 as seed ortholog is 100%.
Bootstrap support for E9JCV6 as seed ortholog is 100%.

Group of orthologs #1431. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KKV0              	100.00%		E9J1N6              	100.00%
Bootstrap support for Q5KKV0 as seed ortholog is 100%.
Bootstrap support for E9J1N6 as seed ortholog is 100%.

Group of orthologs #1432. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KFM1              	100.00%		E9J7U0              	100.00%
Bootstrap support for Q5KFM1 as seed ortholog is 100%.
Bootstrap support for E9J7U0 as seed ortholog is 100%.

Group of orthologs #1433. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 S.invicta:67

Q5KE76              	100.00%		E9J9G8              	100.00%
Bootstrap support for Q5KE76 as seed ortholog is 100%.
Bootstrap support for E9J9G8 as seed ortholog is 100%.

Group of orthologs #1434. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

Q5K878              	100.00%		E9IRX3              	100.00%
Q5KNL0              	47.29%		
Bootstrap support for Q5K878 as seed ortholog is 100%.
Bootstrap support for E9IRX3 as seed ortholog is 100%.

Group of orthologs #1435. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

Q5K7S6              	100.00%		E9IC06              	100.00%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for E9IC06 as seed ortholog is 100%.

Group of orthologs #1436. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

Q5K7P3              	100.00%		E9IG93              	100.00%
Bootstrap support for Q5K7P3 as seed ortholog is 100%.
Bootstrap support for E9IG93 as seed ortholog is 100%.

Group of orthologs #1437. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

Q5KCK6              	100.00%		E9IG06              	100.00%
Bootstrap support for Q5KCK6 as seed ortholog is 100%.
Bootstrap support for E9IG06 as seed ortholog is 100%.

Group of orthologs #1438. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

Q5KLL3              	100.00%		E9IAW1              	100.00%
Bootstrap support for Q5KLL3 as seed ortholog is 100%.
Bootstrap support for E9IAW1 as seed ortholog is 100%.

Group of orthologs #1439. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

Q5KIX6              	100.00%		E9IKQ2              	100.00%
Bootstrap support for Q5KIX6 as seed ortholog is 100%.
Bootstrap support for E9IKQ2 as seed ortholog is 100%.

Group of orthologs #1440. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 S.invicta:66

P0CM36              	100.00%		E9J914              	100.00%
Bootstrap support for P0CM36 as seed ortholog is 100%.
Bootstrap support for E9J914 as seed ortholog is 100%.

Group of orthologs #1441. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 S.invicta:65

Q5KJ09              	100.00%		E9IVA6              	100.00%
Bootstrap support for Q5KJ09 as seed ortholog is 100%.
Bootstrap support for E9IVA6 as seed ortholog is 100%.

Group of orthologs #1442. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:64

Q5KEW1              	100.00%		E9IZ71              	100.00%
Q5KBN1              	28.53%		
Bootstrap support for Q5KEW1 as seed ortholog is 100%.
Bootstrap support for E9IZ71 as seed ortholog is 100%.

Group of orthologs #1443. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:64

Q5KFF0              	100.00%		E9IIV6              	100.00%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for E9IIV6 as seed ortholog is 100%.

Group of orthologs #1444. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:64

Q5KH14              	100.00%		E9IPJ8              	100.00%
Bootstrap support for Q5KH14 as seed ortholog is 100%.
Bootstrap support for E9IPJ8 as seed ortholog is 100%.

Group of orthologs #1445. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:64

P0CQ28              	100.00%		E9J3C3              	100.00%
Bootstrap support for P0CQ28 as seed ortholog is 100%.
Bootstrap support for E9J3C3 as seed ortholog is 100%.

Group of orthologs #1446. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:64

Q5KMT7              	100.00%		E9IYF9              	100.00%
Bootstrap support for Q5KMT7 as seed ortholog is 100%.
Bootstrap support for E9IYF9 as seed ortholog is 100%.

Group of orthologs #1447. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 S.invicta:64

Q5KK46              	100.00%		E9J8N4              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for E9J8N4 as seed ortholog is 100%.

Group of orthologs #1448. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 S.invicta:63

Q5K9P1              	100.00%		E9IE55              	100.00%
Bootstrap support for Q5K9P1 as seed ortholog is 100%.
Bootstrap support for E9IE55 as seed ortholog is 100%.

Group of orthologs #1449. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 S.invicta:11

Q5KAZ1              	100.00%		E9J624              	100.00%
                    	       		E9J625              	33.33%
                    	       		E9J623              	17.59%
Bootstrap support for Q5KAZ1 as seed ortholog is 100%.
Bootstrap support for E9J624 as seed ortholog is 65%.
Alternative seed ortholog is E9IFA0 (11 bits away from this cluster)

Group of orthologs #1450. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 S.invicta:62

P0CQ32              	100.00%		E9ILY8              	100.00%
Bootstrap support for P0CQ32 as seed ortholog is 100%.
Bootstrap support for E9ILY8 as seed ortholog is 100%.

Group of orthologs #1451. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 S.invicta:62

Q5KP88              	100.00%		E9IFL8              	100.00%
Bootstrap support for Q5KP88 as seed ortholog is 100%.
Bootstrap support for E9IFL8 as seed ortholog is 100%.

Group of orthologs #1452. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 S.invicta:62

Q5KL57              	100.00%		E9IMY5              	100.00%
Bootstrap support for Q5KL57 as seed ortholog is 100%.
Bootstrap support for E9IMY5 as seed ortholog is 100%.

Group of orthologs #1453. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:2 S.invicta:62

Q5KCV8              	100.00%		E9IZI1              	100.00%
Bootstrap support for Q5KCV8 as seed ortholog is 65%.
Alternative seed ortholog is Q5KL61 (2 bits away from this cluster)
Bootstrap support for E9IZI1 as seed ortholog is 100%.

Group of orthologs #1454. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 S.invicta:61

Q5KJ07              	100.00%		E9I8E1              	100.00%
                    	       		E9IFY8              	12.11%
Bootstrap support for Q5KJ07 as seed ortholog is 100%.
Bootstrap support for E9I8E1 as seed ortholog is 100%.

Group of orthologs #1455. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 S.invicta:61

Q5KI76              	100.00%		E9IZA7              	100.00%
Q5KGW6              	14.67%		
Bootstrap support for Q5KI76 as seed ortholog is 100%.
Bootstrap support for E9IZA7 as seed ortholog is 100%.

Group of orthologs #1456. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 S.invicta:61

Q5K9H8              	100.00%		E9IAB1              	100.00%
Bootstrap support for Q5K9H8 as seed ortholog is 100%.
Bootstrap support for E9IAB1 as seed ortholog is 100%.

Group of orthologs #1457. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 S.invicta:61

Q5KBB0              	100.00%		E9JCD2              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for E9JCD2 as seed ortholog is 100%.

Group of orthologs #1458. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 S.invicta:61

Q5KJT0              	100.00%		E9J940              	100.00%
Bootstrap support for Q5KJT0 as seed ortholog is 100%.
Bootstrap support for E9J940 as seed ortholog is 100%.

Group of orthologs #1459. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 S.invicta:60

Q5KPM5              	100.00%		E9I9T2              	100.00%
Q5KAF6              	37.42%		
Bootstrap support for Q5KPM5 as seed ortholog is 100%.
Bootstrap support for E9I9T2 as seed ortholog is 100%.

Group of orthologs #1460. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 S.invicta:60

Q5K823              	100.00%		E9ITG2              	100.00%
Bootstrap support for Q5K823 as seed ortholog is 100%.
Bootstrap support for E9ITG2 as seed ortholog is 100%.

Group of orthologs #1461. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 S.invicta:60

Q5KPN1              	100.00%		E9IPP3              	100.00%
Bootstrap support for Q5KPN1 as seed ortholog is 100%.
Bootstrap support for E9IPP3 as seed ortholog is 100%.

Group of orthologs #1462. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:59

Q5KJ61              	100.00%		E9JAQ6              	100.00%
                    	       		E9IW34              	50.71%
                    	       		E9IJV3              	43.05%
                    	       		E9IR19              	30.21%
                    	       		E9JAQ7              	27.18%
                    	       		E9IH55              	25.13%
                    	       		E9IVB9              	17.20%
                    	       		E9J1J0              	11.41%
Bootstrap support for Q5KJ61 as seed ortholog is 100%.
Bootstrap support for E9JAQ6 as seed ortholog is 100%.

Group of orthologs #1463. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:59

Q5KBI9              	100.00%		E9I970              	100.00%
Bootstrap support for Q5KBI9 as seed ortholog is 100%.
Bootstrap support for E9I970 as seed ortholog is 100%.

Group of orthologs #1464. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:59

Q5KGP9              	100.00%		E9ILH2              	100.00%
Bootstrap support for Q5KGP9 as seed ortholog is 100%.
Bootstrap support for E9ILH2 as seed ortholog is 100%.

Group of orthologs #1465. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:59

Q5KI51              	100.00%		E9IM55              	100.00%
Bootstrap support for Q5KI51 as seed ortholog is 100%.
Bootstrap support for E9IM55 as seed ortholog is 100%.

Group of orthologs #1466. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:8

Q5KLA4              	100.00%		E9INR8              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for E9INR8 as seed ortholog is 66%.
Alternative seed ortholog is E9IQJ7 (8 bits away from this cluster)

Group of orthologs #1467. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 S.invicta:59

Q5KPT6              	100.00%		E9IMR2              	100.00%
Bootstrap support for Q5KPT6 as seed ortholog is 100%.
Bootstrap support for E9IMR2 as seed ortholog is 100%.

Group of orthologs #1468. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 S.invicta:58

P0CO12              	100.00%		E9IBA9              	100.00%
Bootstrap support for P0CO12 as seed ortholog is 100%.
Bootstrap support for E9IBA9 as seed ortholog is 100%.

Group of orthologs #1469. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 S.invicta:58

Q5KF90              	100.00%		E9I8C7              	100.00%
Bootstrap support for Q5KF90 as seed ortholog is 100%.
Bootstrap support for E9I8C7 as seed ortholog is 100%.

Group of orthologs #1470. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 S.invicta:58

Q5KDP7              	100.00%		E9IQT3              	100.00%
Bootstrap support for Q5KDP7 as seed ortholog is 100%.
Bootstrap support for E9IQT3 as seed ortholog is 100%.

Group of orthologs #1471. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 S.invicta:57

Q5K9S1              	100.00%		E9IKL4              	100.00%
Bootstrap support for Q5K9S1 as seed ortholog is 100%.
Bootstrap support for E9IKL4 as seed ortholog is 100%.

Group of orthologs #1472. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 S.invicta:56

Q5KEU2              	100.00%		E9IXI2              	100.00%
Q5KGD8              	11.52%		
Bootstrap support for Q5KEU2 as seed ortholog is 100%.
Bootstrap support for E9IXI2 as seed ortholog is 100%.

Group of orthologs #1473. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 S.invicta:56

Q5KBV8              	100.00%		E9J4H4              	100.00%
Bootstrap support for Q5KBV8 as seed ortholog is 100%.
Bootstrap support for E9J4H4 as seed ortholog is 100%.

Group of orthologs #1474. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 S.invicta:55

Q5KP02              	100.00%		E9IQ09              	100.00%
Bootstrap support for Q5KP02 as seed ortholog is 100%.
Bootstrap support for E9IQ09 as seed ortholog is 100%.

Group of orthologs #1475. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 S.invicta:54

Q5KDE2              	100.00%		E9ILT6              	100.00%
Q5KBI5              	12.78%		
Bootstrap support for Q5KDE2 as seed ortholog is 100%.
Bootstrap support for E9ILT6 as seed ortholog is 100%.

Group of orthologs #1476. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 S.invicta:52

Q5KI44              	100.00%		E9IC03              	100.00%
Bootstrap support for Q5KI44 as seed ortholog is 100%.
Bootstrap support for E9IC03 as seed ortholog is 100%.

Group of orthologs #1477. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 S.invicta:52

Q5K9B7              	100.00%		E9J166              	100.00%
Bootstrap support for Q5K9B7 as seed ortholog is 100%.
Bootstrap support for E9J166 as seed ortholog is 100%.

Group of orthologs #1478. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 S.invicta:52

Q5KN43              	100.00%		E9JAV0              	100.00%
Bootstrap support for Q5KN43 as seed ortholog is 100%.
Bootstrap support for E9JAV0 as seed ortholog is 100%.

Group of orthologs #1479. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 S.invicta:51

Q5KB57              	100.00%		E9ICP6              	100.00%
Bootstrap support for Q5KB57 as seed ortholog is 100%.
Bootstrap support for E9ICP6 as seed ortholog is 100%.

Group of orthologs #1480. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 S.invicta:51

Q5KI28              	100.00%		E9I8S4              	100.00%
Bootstrap support for Q5KI28 as seed ortholog is 100%.
Bootstrap support for E9I8S4 as seed ortholog is 100%.

Group of orthologs #1481. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 S.invicta:51

Q5KBR2              	100.00%		E9ISR2              	100.00%
Bootstrap support for Q5KBR2 as seed ortholog is 100%.
Bootstrap support for E9ISR2 as seed ortholog is 100%.

Group of orthologs #1482. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 S.invicta:51

Q5KNV5              	100.00%		E9IPH4              	100.00%
Bootstrap support for Q5KNV5 as seed ortholog is 100%.
Bootstrap support for E9IPH4 as seed ortholog is 100%.

Group of orthologs #1483. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 S.invicta:51

Q5KMR1              	100.00%		E9J8L3              	100.00%
Bootstrap support for Q5KMR1 as seed ortholog is 100%.
Bootstrap support for E9J8L3 as seed ortholog is 100%.

Group of orthologs #1484. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 S.invicta:50

Q5KAI0              	100.00%		E9IIH9              	100.00%
Bootstrap support for Q5KAI0 as seed ortholog is 100%.
Bootstrap support for E9IIH9 as seed ortholog is 100%.

Group of orthologs #1485. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 S.invicta:50

Q5KCT6              	100.00%		E9J0U8              	100.00%
Bootstrap support for Q5KCT6 as seed ortholog is 100%.
Bootstrap support for E9J0U8 as seed ortholog is 100%.

Group of orthologs #1486. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 S.invicta:49

Q5KPJ0              	100.00%		E9IKY4              	100.00%
Q5KJD9              	22.05%		
Q5KFL3              	16.23%		
Bootstrap support for Q5KPJ0 as seed ortholog is 100%.
Bootstrap support for E9IKY4 as seed ortholog is 100%.

Group of orthologs #1487. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 S.invicta:49

P0CR96              	100.00%		E9IXV7              	100.00%
Bootstrap support for P0CR96 as seed ortholog is 100%.
Bootstrap support for E9IXV7 as seed ortholog is 100%.

Group of orthologs #1488. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 S.invicta:49

Q5KF85              	100.00%		E9J9T8              	100.00%
Bootstrap support for Q5KF85 as seed ortholog is 100%.
Bootstrap support for E9J9T8 as seed ortholog is 100%.

Group of orthologs #1489. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 S.invicta:48

P0CM84              	100.00%		E9IFE9              	100.00%
Bootstrap support for P0CM84 as seed ortholog is 100%.
Bootstrap support for E9IFE9 as seed ortholog is 100%.

Group of orthologs #1490. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 S.invicta:48

Q5K827              	100.00%		E9JCL2              	100.00%
Bootstrap support for Q5K827 as seed ortholog is 100%.
Bootstrap support for E9JCL2 as seed ortholog is 100%.

Group of orthologs #1491. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KB75              	100.00%		E9IDJ4              	100.00%
                    	       		E9IDT6              	8.87%
Bootstrap support for Q5KB75 as seed ortholog is 100%.
Bootstrap support for E9IDJ4 as seed ortholog is 100%.

Group of orthologs #1492. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KIM9              	100.00%		E9IBI3              	100.00%
Bootstrap support for Q5KIM9 as seed ortholog is 100%.
Bootstrap support for E9IBI3 as seed ortholog is 100%.

Group of orthologs #1493. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5K973              	100.00%		E9IQ01              	100.00%
Bootstrap support for Q5K973 as seed ortholog is 100%.
Bootstrap support for E9IQ01 as seed ortholog is 100%.

Group of orthologs #1494. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KAA9              	100.00%		E9IPP4              	100.00%
Bootstrap support for Q5KAA9 as seed ortholog is 100%.
Bootstrap support for E9IPP4 as seed ortholog is 100%.

Group of orthologs #1495. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KE80              	100.00%		E9ILP8              	100.00%
Bootstrap support for Q5KE80 as seed ortholog is 100%.
Bootstrap support for E9ILP8 as seed ortholog is 100%.

Group of orthologs #1496. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KMS1              	100.00%		E9IN50              	100.00%
Bootstrap support for Q5KMS1 as seed ortholog is 100%.
Bootstrap support for E9IN50 as seed ortholog is 100%.

Group of orthologs #1497. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KNB6              	100.00%		E9IXL9              	100.00%
Bootstrap support for Q5KNB6 as seed ortholog is 100%.
Bootstrap support for E9IXL9 as seed ortholog is 100%.

Group of orthologs #1498. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 S.invicta:47

Q5KPM9              	100.00%		E9J353              	100.00%
Bootstrap support for Q5KPM9 as seed ortholog is 100%.
Bootstrap support for E9J353 as seed ortholog is 100%.

Group of orthologs #1499. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 S.invicta:45

Q5K9Q9              	100.00%		E9IIN1              	9.09%
Q5KG59              	100.00%		E9J8W0              	100.00%
                    	       		E9J1C1              	7.58%
                    	       		E9J4M6              	6.57%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for E9J8W0 as seed ortholog is 100%.

Group of orthologs #1500. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 S.invicta:45

Q5K946              	100.00%		E9IL34              	100.00%
Bootstrap support for Q5K946 as seed ortholog is 100%.
Bootstrap support for E9IL34 as seed ortholog is 100%.

Group of orthologs #1501. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 S.invicta:45

P0CO72              	100.00%		E9J3B9              	100.00%
Bootstrap support for P0CO72 as seed ortholog is 100%.
Bootstrap support for E9J3B9 as seed ortholog is 100%.

Group of orthologs #1502. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 S.invicta:45

Q5KEH4              	100.00%		E9J6Y6              	100.00%
Bootstrap support for Q5KEH4 as seed ortholog is 100%.
Bootstrap support for E9J6Y6 as seed ortholog is 100%.

Group of orthologs #1503. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 S.invicta:45

Q5KD81              	100.00%		E9JB66              	100.00%
Bootstrap support for Q5KD81 as seed ortholog is 100%.
Bootstrap support for E9JB66 as seed ortholog is 100%.

Group of orthologs #1504. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:44

Q5KFK1              	100.00%		E9IEC1              	100.00%
Q5KFK2              	85.15%		
Q5KER3              	61.18%		
Q5KC83              	23.97%		
Q5K9A2              	23.50%		
Q5KFM8              	16.45%		
Q5KB76              	15.98%		
Q5KH82              	15.70%		
Q5KJE6              	7.24%		
Q5KL40              	7.05%		
Bootstrap support for Q5KFK1 as seed ortholog is 100%.
Bootstrap support for E9IEC1 as seed ortholog is 100%.

Group of orthologs #1505. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:44

Q5K8Y3              	100.00%		E9ITW4              	100.00%
                    	       		E9I8D5              	9.18%
                    	       		E9J0C9              	8.98%
                    	       		E9IH52              	7.97%
                    	       		E9JBN9              	7.37%
                    	       		E9IE45              	5.85%
Bootstrap support for Q5K8Y3 as seed ortholog is 100%.
Bootstrap support for E9ITW4 as seed ortholog is 100%.

Group of orthologs #1506. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:44

Q5K9S0              	100.00%		E9IHL3              	100.00%
Bootstrap support for Q5K9S0 as seed ortholog is 100%.
Bootstrap support for E9IHL3 as seed ortholog is 100%.

Group of orthologs #1507. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:44

Q5K9K3              	100.00%		E9IW65              	100.00%
Bootstrap support for Q5K9K3 as seed ortholog is 100%.
Bootstrap support for E9IW65 as seed ortholog is 100%.

Group of orthologs #1508. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 S.invicta:44

Q5KCZ3              	100.00%		E9J4G0              	100.00%
Bootstrap support for Q5KCZ3 as seed ortholog is 100%.
Bootstrap support for E9J4G0 as seed ortholog is 100%.

Group of orthologs #1509. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 S.invicta:43

Q5KPF2              	100.00%		E9JA86              	100.00%
                    	       		E9J348              	16.93%
Bootstrap support for Q5KPF2 as seed ortholog is 100%.
Bootstrap support for E9JA86 as seed ortholog is 100%.

Group of orthologs #1510. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 S.invicta:43

Q5KGX3              	100.00%		E9IFD7              	100.00%
Bootstrap support for Q5KGX3 as seed ortholog is 100%.
Bootstrap support for E9IFD7 as seed ortholog is 100%.

Group of orthologs #1511. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 S.invicta:43

Q5KBV9              	100.00%		E9JCR3              	100.00%
Bootstrap support for Q5KBV9 as seed ortholog is 100%.
Bootstrap support for E9JCR3 as seed ortholog is 100%.

Group of orthologs #1512. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 S.invicta:42

Q5KPB4              	100.00%		E9IS54              	100.00%
Bootstrap support for Q5KPB4 as seed ortholog is 100%.
Bootstrap support for E9IS54 as seed ortholog is 100%.

Group of orthologs #1513. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 S.invicta:41

Q5KNZ7              	100.00%		E9IHP7              	100.00%
Bootstrap support for Q5KNZ7 as seed ortholog is 100%.
Bootstrap support for E9IHP7 as seed ortholog is 100%.

Group of orthologs #1514. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 S.invicta:41

Q5KM56              	100.00%		E9INN5              	100.00%
Bootstrap support for Q5KM56 as seed ortholog is 100%.
Bootstrap support for E9INN5 as seed ortholog is 100%.

Group of orthologs #1515. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 S.invicta:41

Q5KAA4              	100.00%		E9JBM7              	100.00%
Bootstrap support for Q5KAA4 as seed ortholog is 100%.
Bootstrap support for E9JBM7 as seed ortholog is 100%.