###################################
2258 groups of orthologs
2428 in-paralogs from C.neoformans
3683 in-paralogs from P.troglodytes
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4823 bits
Score difference with first non-orthologous sequence - C.neoformans:4823 P.troglodytes:3290

Q5KFR9              	100.00%		H2R961              	100.00%
Bootstrap support for Q5KFR9 as seed ortholog is 100%.
Bootstrap support for H2R961 as seed ortholog is 100%.

Group of orthologs #2. Best score 2173 bits
Score difference with first non-orthologous sequence - C.neoformans:1327 P.troglodytes:840

Q5KET5              	100.00%		H2QIC8              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for H2QIC8 as seed ortholog is 100%.

Group of orthologs #3. Best score 2134 bits
Score difference with first non-orthologous sequence - C.neoformans:2134 P.troglodytes:693

Q5KNM2              	100.00%		H2QHM0              	100.00%
Bootstrap support for Q5KNM2 as seed ortholog is 100%.
Bootstrap support for H2QHM0 as seed ortholog is 100%.

Group of orthologs #4. Best score 1974 bits
Score difference with first non-orthologous sequence - C.neoformans:1974 P.troglodytes:1974

Q5KA29              	100.00%		H2QZP7              	100.00%
                    	       		H2QL83              	62.71%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for H2QZP7 as seed ortholog is 100%.

Group of orthologs #5. Best score 1909 bits
Score difference with first non-orthologous sequence - C.neoformans:1909 P.troglodytes:1909

Q5KAK5              	100.00%		H2QTE8              	100.00%
Bootstrap support for Q5KAK5 as seed ortholog is 100%.
Bootstrap support for H2QTE8 as seed ortholog is 100%.

Group of orthologs #6. Best score 1836 bits
Score difference with first non-orthologous sequence - C.neoformans:1836 P.troglodytes:1836

Q5KFC9              	100.00%		H2R9M5              	100.00%
                    	       		H2Q6U2              	58.50%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for H2R9M5 as seed ortholog is 100%.

Group of orthologs #7. Best score 1737 bits
Score difference with first non-orthologous sequence - C.neoformans:1737 P.troglodytes:1737

Q5KGG3              	100.00%		H2R1J6              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for H2R1J6 as seed ortholog is 100%.

Group of orthologs #8. Best score 1677 bits
Score difference with first non-orthologous sequence - C.neoformans:1677 P.troglodytes:1677

Q5KEY7              	100.00%		H2PY03              	100.00%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for H2PY03 as seed ortholog is 100%.

Group of orthologs #9. Best score 1343 bits
Score difference with first non-orthologous sequence - C.neoformans:1343 P.troglodytes:1343

Q5KC33              	100.00%		H2Q6S4              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for H2Q6S4 as seed ortholog is 100%.

Group of orthologs #10. Best score 1287 bits
Score difference with first non-orthologous sequence - C.neoformans:1287 P.troglodytes:1287

Q5KIB7              	100.00%		H2QPI8              	100.00%
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for H2QPI8 as seed ortholog is 100%.

Group of orthologs #11. Best score 1278 bits
Score difference with first non-orthologous sequence - C.neoformans:1278 P.troglodytes:1278

Q5KBW5              	100.00%		H2QJ69              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for H2QJ69 as seed ortholog is 100%.

Group of orthologs #12. Best score 1266 bits
Score difference with first non-orthologous sequence - C.neoformans:1266 P.troglodytes:1266

Q5KEH7              	100.00%		H2Q0E3              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for H2Q0E3 as seed ortholog is 100%.

Group of orthologs #13. Best score 1258 bits
Score difference with first non-orthologous sequence - C.neoformans:838 P.troglodytes:726

Q5KJ25              	100.00%		H2QD51              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for H2QD51 as seed ortholog is 100%.

Group of orthologs #14. Best score 1257 bits
Score difference with first non-orthologous sequence - C.neoformans:1257 P.troglodytes:1257

Q5KFV9              	100.00%		H2Q251              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for H2Q251 as seed ortholog is 100%.

Group of orthologs #15. Best score 1226 bits
Score difference with first non-orthologous sequence - C.neoformans:1226 P.troglodytes:1226

Q5KNL1              	100.00%		H2R3W0              	100.00%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for H2R3W0 as seed ortholog is 100%.

Group of orthologs #16. Best score 1205 bits
Score difference with first non-orthologous sequence - C.neoformans:1205 P.troglodytes:1205

Q5KP97              	100.00%		H2QM73              	100.00%
                    	       		H2QCW5              	23.28%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for H2QM73 as seed ortholog is 100%.

Group of orthologs #17. Best score 1193 bits
Score difference with first non-orthologous sequence - C.neoformans:738 P.troglodytes:792

Q5KA71              	100.00%		H2QX75              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for H2QX75 as seed ortholog is 100%.

Group of orthologs #18. Best score 1177 bits
Score difference with first non-orthologous sequence - C.neoformans:791 P.troglodytes:885

Q5KGT3              	100.00%		H2QBH8              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for H2QBH8 as seed ortholog is 100%.

Group of orthologs #19. Best score 1161 bits
Score difference with first non-orthologous sequence - C.neoformans:1161 P.troglodytes:1161

P0CR22              	100.00%		H2QBG5              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for H2QBG5 as seed ortholog is 100%.

Group of orthologs #20. Best score 1161 bits
Score difference with first non-orthologous sequence - C.neoformans:1161 P.troglodytes:1161

Q5KE57              	100.00%		H2R0K9              	100.00%
Bootstrap support for Q5KE57 as seed ortholog is 100%.
Bootstrap support for H2R0K9 as seed ortholog is 100%.

Group of orthologs #21. Best score 1151 bits
Score difference with first non-orthologous sequence - C.neoformans:1151 P.troglodytes:1151

Q5KPM2              	100.00%		H2R6L5              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for H2R6L5 as seed ortholog is 100%.

Group of orthologs #22. Best score 1148 bits
Score difference with first non-orthologous sequence - C.neoformans:1148 P.troglodytes:1148

Q5KFT2              	100.00%		H2R399              	100.00%
Bootstrap support for Q5KFT2 as seed ortholog is 100%.
Bootstrap support for H2R399 as seed ortholog is 100%.

Group of orthologs #23. Best score 1142 bits
Score difference with first non-orthologous sequence - C.neoformans:1142 P.troglodytes:1042

Q5KIQ1              	100.00%		H2QD78              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for H2QD78 as seed ortholog is 100%.

Group of orthologs #24. Best score 1137 bits
Score difference with first non-orthologous sequence - C.neoformans:1137 P.troglodytes:1137

Q5KKH8              	100.00%		H2QFU1              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for H2QFU1 as seed ortholog is 100%.

Group of orthologs #25. Best score 1136 bits
Score difference with first non-orthologous sequence - C.neoformans:1136 P.troglodytes:1136

Q5KGK1              	100.00%		H2Q2Y0              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for H2Q2Y0 as seed ortholog is 100%.

Group of orthologs #26. Best score 1099 bits
Score difference with first non-orthologous sequence - C.neoformans:1099 P.troglodytes:1099

Q5KM99              	100.00%		H2Q702              	100.00%
Bootstrap support for Q5KM99 as seed ortholog is 100%.
Bootstrap support for H2Q702 as seed ortholog is 100%.

Group of orthologs #27. Best score 1092 bits
Score difference with first non-orthologous sequence - C.neoformans:683 P.troglodytes:675

Q5KD67              	100.00%		H2R1C2              	100.00%
                    	       		H2QKK9              	45.78%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for H2R1C2 as seed ortholog is 100%.

Group of orthologs #28. Best score 1092 bits
Score difference with first non-orthologous sequence - C.neoformans:1092 P.troglodytes:1092

Q5KAR2              	100.00%		H2R314              	100.00%
Bootstrap support for Q5KAR2 as seed ortholog is 100%.
Bootstrap support for H2R314 as seed ortholog is 100%.

Group of orthologs #29. Best score 1074 bits
Score difference with first non-orthologous sequence - C.neoformans:1074 P.troglodytes:1074

Q5KHW3              	100.00%		H2QQX1              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for H2QQX1 as seed ortholog is 100%.

Group of orthologs #30. Best score 1068 bits
Score difference with first non-orthologous sequence - C.neoformans:1068 P.troglodytes:1068

Q5KG64              	100.00%		H2Q297              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for H2Q297 as seed ortholog is 100%.

Group of orthologs #31. Best score 1059 bits
Score difference with first non-orthologous sequence - C.neoformans:1059 P.troglodytes:1059

Q5KIF6              	100.00%		H2QIA1              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for H2QIA1 as seed ortholog is 100%.

Group of orthologs #32. Best score 1038 bits
Score difference with first non-orthologous sequence - C.neoformans:390 P.troglodytes:1038

Q5KH79              	100.00%		H2R0H4              	100.00%
Bootstrap support for Q5KH79 as seed ortholog is 100%.
Bootstrap support for H2R0H4 as seed ortholog is 100%.

Group of orthologs #33. Best score 1029 bits
Score difference with first non-orthologous sequence - C.neoformans:808 P.troglodytes:585

Q5KCR8              	100.00%		H2QQ80              	100.00%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for H2QQ80 as seed ortholog is 100%.

Group of orthologs #34. Best score 1008 bits
Score difference with first non-orthologous sequence - C.neoformans:660 P.troglodytes:645

Q5KCV6              	100.00%		H2Q6V4              	100.00%
                    	       		H2QAV0              	53.08%
                    	       		H2R240              	44.78%
Bootstrap support for Q5KCV6 as seed ortholog is 100%.
Bootstrap support for H2Q6V4 as seed ortholog is 100%.

Group of orthologs #35. Best score 1007 bits
Score difference with first non-orthologous sequence - C.neoformans:1007 P.troglodytes:1007

Q5KEV8              	100.00%		H2R8N5              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for H2R8N5 as seed ortholog is 100%.

Group of orthologs #36. Best score 994 bits
Score difference with first non-orthologous sequence - C.neoformans:994 P.troglodytes:994

Q5KEG6              	100.00%		H2Q8G3              	100.00%
Bootstrap support for Q5KEG6 as seed ortholog is 100%.
Bootstrap support for H2Q8G3 as seed ortholog is 100%.

Group of orthologs #37. Best score 989 bits
Score difference with first non-orthologous sequence - C.neoformans:989 P.troglodytes:989

Q5K754              	100.00%		H2Q3E3              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for H2Q3E3 as seed ortholog is 100%.

Group of orthologs #38. Best score 989 bits
Score difference with first non-orthologous sequence - C.neoformans:586 P.troglodytes:455

Q5KKN7              	100.00%		Q7YR39              	100.00%
Bootstrap support for Q5KKN7 as seed ortholog is 100%.
Bootstrap support for Q7YR39 as seed ortholog is 100%.

Group of orthologs #39. Best score 981 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:186

Q5KJN9              	100.00%		H2RDA1              	100.00%
                    	       		H2QDF7              	16.25%
                    	       		H2QAM9              	7.62%
Bootstrap support for Q5KJN9 as seed ortholog is 98%.
Bootstrap support for H2RDA1 as seed ortholog is 99%.

Group of orthologs #40. Best score 980 bits
Score difference with first non-orthologous sequence - C.neoformans:980 P.troglodytes:980

Q5KL19              	100.00%		H2R6T5              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for H2R6T5 as seed ortholog is 100%.

Group of orthologs #41. Best score 975 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.troglodytes:775

Q5KIK6              	100.00%		H2QLS4              	100.00%
Bootstrap support for Q5KIK6 as seed ortholog is 99%.
Bootstrap support for H2QLS4 as seed ortholog is 100%.

Group of orthologs #42. Best score 963 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.troglodytes:203

Q5KP96              	100.00%		H2QPE0              	100.00%
                    	       		H2R475              	47.19%
Bootstrap support for Q5KP96 as seed ortholog is 99%.
Bootstrap support for H2QPE0 as seed ortholog is 99%.

Group of orthologs #43. Best score 957 bits
Score difference with first non-orthologous sequence - C.neoformans:957 P.troglodytes:212

Q5KMF6              	100.00%		H2QSM5              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for H2QSM5 as seed ortholog is 99%.

Group of orthologs #44. Best score 947 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.troglodytes:630

Q5KKM4              	100.00%		H2RF71              	100.00%
Q5KKP4              	80.97%		H2R7H0              	57.32%
                    	       		H2Q500              	40.76%
Bootstrap support for Q5KKM4 as seed ortholog is 100%.
Bootstrap support for H2RF71 as seed ortholog is 100%.

Group of orthologs #45. Best score 945 bits
Score difference with first non-orthologous sequence - C.neoformans:945 P.troglodytes:945

Q5K7U0              	100.00%		H2QRQ2              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for H2QRQ2 as seed ortholog is 100%.

Group of orthologs #46. Best score 939 bits
Score difference with first non-orthologous sequence - C.neoformans:939 P.troglodytes:349

Q5KMH0              	100.00%		H2QUI7              	100.00%
                    	       		H2Q1W4              	39.01%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for H2QUI7 as seed ortholog is 100%.

Group of orthologs #47. Best score 936 bits
Score difference with first non-orthologous sequence - C.neoformans:936 P.troglodytes:503

Q5KJI1              	100.00%		H2QC84              	100.00%
                    	       		H2QAM8              	67.76%
                    	       		H2QLK6              	60.98%
                    	       		H2R5W8              	57.37%
                    	       		H2QC98              	16.30%
                    	       		H2R9J3              	15.71%
                    	       		H2QK88              	15.50%
                    	       		H2QCA0              	15.43%
                    	       		H2R2N7              	15.32%
                    	       		H2QC97              	15.22%
                    	       		H2QC99              	14.25%
                    	       		H2QCA2              	13.48%
                    	       		H2QN23              	11.67%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for H2QC84 as seed ortholog is 100%.

Group of orthologs #48. Best score 936 bits
Score difference with first non-orthologous sequence - C.neoformans:936 P.troglodytes:936

Q5KA48              	100.00%		H2PZG8              	100.00%
Bootstrap support for Q5KA48 as seed ortholog is 100%.
Bootstrap support for H2PZG8 as seed ortholog is 100%.

Group of orthologs #49. Best score 931 bits
Score difference with first non-orthologous sequence - C.neoformans:517 P.troglodytes:276

Q5K7R6              	100.00%		H2QT34              	100.00%
                    	       		H2RD80              	66.93%
                    	       		A5A6K9              	66.33%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for H2QT34 as seed ortholog is 100%.

Group of orthologs #50. Best score 928 bits
Score difference with first non-orthologous sequence - C.neoformans:391 P.troglodytes:670

Q5KN49              	100.00%		H2QUV7              	100.00%
                    	       		H2R3D1              	62.42%
                    	       		H2QU87              	30.37%
                    	       		H2QIX8              	22.97%
Bootstrap support for Q5KN49 as seed ortholog is 100%.
Bootstrap support for H2QUV7 as seed ortholog is 100%.

Group of orthologs #51. Best score 926 bits
Score difference with first non-orthologous sequence - C.neoformans:926 P.troglodytes:926

P0CR38              	100.00%		H2QK08              	100.00%
                    	       		H2Q876              	65.88%
Bootstrap support for P0CR38 as seed ortholog is 100%.
Bootstrap support for H2QK08 as seed ortholog is 100%.

Group of orthologs #52. Best score 908 bits
Score difference with first non-orthologous sequence - C.neoformans:908 P.troglodytes:908

Q5KLE4              	100.00%		H2QNH0              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for H2QNH0 as seed ortholog is 100%.

Group of orthologs #53. Best score 899 bits
Score difference with first non-orthologous sequence - C.neoformans:899 P.troglodytes:899

Q5KIL9              	100.00%		H2QKJ3              	100.00%
                    	       		H2QW96              	65.47%
Bootstrap support for Q5KIL9 as seed ortholog is 100%.
Bootstrap support for H2QKJ3 as seed ortholog is 100%.

Group of orthologs #54. Best score 883 bits
Score difference with first non-orthologous sequence - C.neoformans:883 P.troglodytes:883

Q5KDU2              	100.00%		H2Q377              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for H2Q377 as seed ortholog is 100%.

Group of orthologs #55. Best score 875 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.troglodytes:577

Q5K6Z6              	100.00%		H2PYQ3              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 100%.
Bootstrap support for H2PYQ3 as seed ortholog is 100%.

Group of orthologs #56. Best score 874 bits
Score difference with first non-orthologous sequence - C.neoformans:874 P.troglodytes:604

Q5KDY4              	100.00%		H2QNA7              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for H2QNA7 as seed ortholog is 100%.

Group of orthologs #57. Best score 873 bits
Score difference with first non-orthologous sequence - C.neoformans:873 P.troglodytes:873

Q5KH77              	100.00%		H2R3G0              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for H2R3G0 as seed ortholog is 100%.

Group of orthologs #58. Best score 870 bits
Score difference with first non-orthologous sequence - C.neoformans:870 P.troglodytes:762

Q5K8Q4              	100.00%		H2QFV7              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for H2QFV7 as seed ortholog is 100%.

Group of orthologs #59. Best score 867 bits
Score difference with first non-orthologous sequence - C.neoformans:867 P.troglodytes:648

Q5KNR6              	100.00%		G2HHJ3              	100.00%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for G2HHJ3 as seed ortholog is 100%.

Group of orthologs #60. Best score 867 bits
Score difference with first non-orthologous sequence - C.neoformans:867 P.troglodytes:711

Q5KHJ9              	100.00%		H2QF02              	100.00%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for H2QF02 as seed ortholog is 100%.

Group of orthologs #61. Best score 867 bits
Score difference with first non-orthologous sequence - C.neoformans:867 P.troglodytes:867

Q5KDF5              	100.00%		H2QXM0              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for H2QXM0 as seed ortholog is 100%.

Group of orthologs #62. Best score 865 bits
Score difference with first non-orthologous sequence - C.neoformans:756 P.troglodytes:865

Q5KBA0              	100.00%		H2R5Q6              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for H2R5Q6 as seed ortholog is 100%.

Group of orthologs #63. Best score 864 bits
Score difference with first non-orthologous sequence - C.neoformans:864 P.troglodytes:256

Q5KF97              	100.00%		H2RA23              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for H2RA23 as seed ortholog is 99%.

Group of orthologs #64. Best score 861 bits
Score difference with first non-orthologous sequence - C.neoformans:861 P.troglodytes:861

Q5KGV5              	100.00%		H2QN48              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for H2QN48 as seed ortholog is 100%.

Group of orthologs #65. Best score 860 bits
Score difference with first non-orthologous sequence - C.neoformans:860 P.troglodytes:860

Q5K9A5              	100.00%		P0CG64              	100.00%
Bootstrap support for Q5K9A5 as seed ortholog is 100%.
Bootstrap support for P0CG64 as seed ortholog is 100%.

Group of orthologs #66. Best score 851 bits
Score difference with first non-orthologous sequence - C.neoformans:449 P.troglodytes:355

Q5KEX1              	100.00%		H2QPA3              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 100%.
Bootstrap support for H2QPA3 as seed ortholog is 100%.

Group of orthologs #67. Best score 846 bits
Score difference with first non-orthologous sequence - C.neoformans:846 P.troglodytes:786

Q5KN88              	100.00%		G2HF28              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for G2HF28 as seed ortholog is 100%.

Group of orthologs #68. Best score 842 bits
Score difference with first non-orthologous sequence - C.neoformans:842 P.troglodytes:777

Q5KBF6              	100.00%		H2R4B1              	100.00%
Bootstrap support for Q5KBF6 as seed ortholog is 100%.
Bootstrap support for H2R4B1 as seed ortholog is 100%.

Group of orthologs #69. Best score 838 bits
Score difference with first non-orthologous sequence - C.neoformans:838 P.troglodytes:838

Q5KLX6              	100.00%		H2QTK5              	100.00%
Bootstrap support for Q5KLX6 as seed ortholog is 100%.
Bootstrap support for H2QTK5 as seed ortholog is 100%.

Group of orthologs #70. Best score 831 bits
Score difference with first non-orthologous sequence - C.neoformans:831 P.troglodytes:831

Q5K9S3              	100.00%		H2QVY7              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for H2QVY7 as seed ortholog is 100%.

Group of orthologs #71. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.troglodytes:572

Q5K8W5              	100.00%		H2QRK8              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 100%.
Bootstrap support for H2QRK8 as seed ortholog is 100%.

Group of orthologs #72. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:829 P.troglodytes:829

Q5KIH7              	100.00%		H2R1R2              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for H2R1R2 as seed ortholog is 100%.

Group of orthologs #73. Best score 825 bits
Score difference with first non-orthologous sequence - C.neoformans:825 P.troglodytes:825

Q5K9G4              	100.00%		H2QFC8              	100.00%
Bootstrap support for Q5K9G4 as seed ortholog is 100%.
Bootstrap support for H2QFC8 as seed ortholog is 100%.

Group of orthologs #74. Best score 823 bits
Score difference with first non-orthologous sequence - C.neoformans:823 P.troglodytes:823

P0CN82              	100.00%		H2QMY2              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for H2QMY2 as seed ortholog is 100%.

Group of orthologs #75. Best score 812 bits
Score difference with first non-orthologous sequence - C.neoformans:812 P.troglodytes:812

Q5KBP7              	100.00%		H2QM84              	100.00%
                    	       		G2HEN1              	6.31%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for H2QM84 as seed ortholog is 100%.

Group of orthologs #76. Best score 810 bits
Score difference with first non-orthologous sequence - C.neoformans:685 P.troglodytes:810

Q5KIS3              	100.00%		H2QE16              	100.00%
Bootstrap support for Q5KIS3 as seed ortholog is 100%.
Bootstrap support for H2QE16 as seed ortholog is 100%.

Group of orthologs #77. Best score 804 bits
Score difference with first non-orthologous sequence - C.neoformans:804 P.troglodytes:804

Q5KAX5              	100.00%		H2QNV3              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for H2QNV3 as seed ortholog is 100%.

Group of orthologs #78. Best score 801 bits
Score difference with first non-orthologous sequence - C.neoformans:801 P.troglodytes:801

Q5KH73              	100.00%		H2QR21              	100.00%
                    	       		H2R0R8              	75.02%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for H2QR21 as seed ortholog is 100%.

Group of orthologs #79. Best score 797 bits
Score difference with first non-orthologous sequence - C.neoformans:797 P.troglodytes:797

Q5KQ25              	100.00%		H2QKT9              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for H2QKT9 as seed ortholog is 100%.

Group of orthologs #80. Best score 795 bits
Score difference with first non-orthologous sequence - C.neoformans:795 P.troglodytes:795

Q5KMN3              	100.00%		H2R8P2              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for H2R8P2 as seed ortholog is 100%.

Group of orthologs #81. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:591 P.troglodytes:497

P0CO16              	100.00%		H2R3P6              	100.00%
Bootstrap support for P0CO16 as seed ortholog is 100%.
Bootstrap support for H2R3P6 as seed ortholog is 100%.

Group of orthologs #82. Best score 789 bits
Score difference with first non-orthologous sequence - C.neoformans:789 P.troglodytes:163

Q5KMU3              	100.00%		H2QQQ4              	100.00%
                    	       		H2QA60              	42.29%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for H2QQQ4 as seed ortholog is 99%.

Group of orthologs #83. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:786 P.troglodytes:419

P0CN32              	100.00%		H2R7Y8              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for H2R7Y8 as seed ortholog is 100%.

Group of orthologs #84. Best score 785 bits
Score difference with first non-orthologous sequence - C.neoformans:785 P.troglodytes:222

Q5KBX3              	100.00%		H2QA45              	100.00%
                    	       		H2QR99              	40.34%
Bootstrap support for Q5KBX3 as seed ortholog is 100%.
Bootstrap support for H2QA45 as seed ortholog is 100%.

Group of orthologs #85. Best score 773 bits
Score difference with first non-orthologous sequence - C.neoformans:773 P.troglodytes:595

Q5KQ62              	100.00%		H2Q9Y7              	100.00%
Bootstrap support for Q5KQ62 as seed ortholog is 100%.
Bootstrap support for H2Q9Y7 as seed ortholog is 100%.

Group of orthologs #86. Best score 770 bits
Score difference with first non-orthologous sequence - C.neoformans:538 P.troglodytes:615

Q5KQ47              	100.00%		H2QQM7              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for H2QQM7 as seed ortholog is 100%.

Group of orthologs #87. Best score 768 bits
Score difference with first non-orthologous sequence - C.neoformans:421 P.troglodytes:111

Q5KM62              	100.00%		G2HFQ0              	100.00%
                    	       		H2QIR0              	93.55%
                    	       		A5A6J1              	89.68%
                    	       		Q5R1W4              	84.52%
                    	       		H2Q5V0              	83.87%
                    	       		H2QJG6              	72.26%
                    	       		H2QL76              	47.10%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for G2HFQ0 as seed ortholog is 99%.

Group of orthologs #88. Best score 765 bits
Score difference with first non-orthologous sequence - C.neoformans:765 P.troglodytes:298

Q5KJ33              	100.00%		H2RA29              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for H2RA29 as seed ortholog is 99%.

Group of orthologs #89. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.troglodytes:79

Q5KKE7              	100.00%		G2HHT2              	100.00%
                    	       		Q7JJU6              	87.67%
                    	       		H2QS82              	86.99%
                    	       		H2QF52              	76.03%
                    	       		H2QBS3              	61.64%
                    	       		H2QS81              	57.53%
                    	       		Q8WP14              	48.63%
                    	       		H2QEA0              	48.63%
                    	       		H2R7W0              	46.58%
                    	       		H2Q189              	16.44%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for G2HHT2 as seed ortholog is 99%.

Group of orthologs #90. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:763 P.troglodytes:346

Q5KHP4              	100.00%		H2R1F1              	100.00%
                    	       		H2QEI7              	52.39%
                    	       		H2Q9G6              	35.02%
Bootstrap support for Q5KHP4 as seed ortholog is 100%.
Bootstrap support for H2R1F1 as seed ortholog is 100%.

Group of orthologs #91. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:763 P.troglodytes:763

Q5K9B2              	100.00%		H2Q4B9              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for H2Q4B9 as seed ortholog is 100%.

Group of orthologs #92. Best score 757 bits
Score difference with first non-orthologous sequence - C.neoformans:757 P.troglodytes:757

Q5KII0              	100.00%		H2R176              	100.00%
                    	       		H2QS64              	44.22%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for H2R176 as seed ortholog is 100%.

Group of orthologs #93. Best score 756 bits
Score difference with first non-orthologous sequence - C.neoformans:756 P.troglodytes:338

P0CN30              	100.00%		Q5R1X2              	100.00%
                    	       		H2RCV2              	97.71%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for Q5R1X2 as seed ortholog is 100%.

Group of orthologs #94. Best score 752 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.troglodytes:349

Q5K8Q3              	100.00%		H2QND5              	100.00%
                    	       		H2QBM4              	37.43%
Bootstrap support for Q5K8Q3 as seed ortholog is 100%.
Bootstrap support for H2QND5 as seed ortholog is 100%.

Group of orthologs #95. Best score 751 bits
Score difference with first non-orthologous sequence - C.neoformans:751 P.troglodytes:751

Q5KML2              	100.00%		Q0MQG2              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for Q0MQG2 as seed ortholog is 100%.

Group of orthologs #96. Best score 743 bits
Score difference with first non-orthologous sequence - C.neoformans:743 P.troglodytes:743

Q5KFB9              	100.00%		A5A6H5              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for A5A6H5 as seed ortholog is 100%.

Group of orthologs #97. Best score 740 bits
Score difference with first non-orthologous sequence - C.neoformans:740 P.troglodytes:740

Q5KBW0              	100.00%		H2QVT8              	100.00%
                    	       		H2QI31              	44.20%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for H2QVT8 as seed ortholog is 100%.

Group of orthologs #98. Best score 738 bits
Score difference with first non-orthologous sequence - C.neoformans:738 P.troglodytes:738

Q5KFU0              	100.00%		H2Q695              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for H2Q695 as seed ortholog is 100%.

Group of orthologs #99. Best score 735 bits
Score difference with first non-orthologous sequence - C.neoformans:735 P.troglodytes:735

Q5KID7              	100.00%		H2QJB6              	100.00%
Bootstrap support for Q5KID7 as seed ortholog is 100%.
Bootstrap support for H2QJB6 as seed ortholog is 100%.

Group of orthologs #100. Best score 734 bits
Score difference with first non-orthologous sequence - C.neoformans:734 P.troglodytes:734

Q5KGH2              	100.00%		H2QNI6              	100.00%
Bootstrap support for Q5KGH2 as seed ortholog is 100%.
Bootstrap support for H2QNI6 as seed ortholog is 100%.

Group of orthologs #101. Best score 733 bits
Score difference with first non-orthologous sequence - C.neoformans:513 P.troglodytes:622

Q5KPI3              	100.00%		H2QI45              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for H2QI45 as seed ortholog is 100%.

Group of orthologs #102. Best score 731 bits
Score difference with first non-orthologous sequence - C.neoformans:731 P.troglodytes:731

Q5K7B4              	100.00%		H2R3B3              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for H2R3B3 as seed ortholog is 100%.

Group of orthologs #103. Best score 729 bits
Score difference with first non-orthologous sequence - C.neoformans:729 P.troglodytes:174

P0CP00              	100.00%		H2Q9I8              	100.00%
                    	       		H2R6E1              	37.05%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for H2Q9I8 as seed ortholog is 98%.

Group of orthologs #104. Best score 729 bits
Score difference with first non-orthologous sequence - C.neoformans:729 P.troglodytes:729

Q5KJT2              	100.00%		H2QB87              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for H2QB87 as seed ortholog is 100%.

Group of orthologs #105. Best score 728 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.troglodytes:441

Q5K906              	100.00%		H2QLG0              	100.00%
Q5KDA3              	99.60%		H2R1D0              	74.38%
Bootstrap support for Q5K906 as seed ortholog is 89%.
Bootstrap support for H2QLG0 as seed ortholog is 100%.

Group of orthologs #106. Best score 725 bits
Score difference with first non-orthologous sequence - C.neoformans:725 P.troglodytes:394

P0CO18              	100.00%		H2RA84              	100.00%
Bootstrap support for P0CO18 as seed ortholog is 100%.
Bootstrap support for H2RA84 as seed ortholog is 100%.

Group of orthologs #107. Best score 725 bits
Score difference with first non-orthologous sequence - C.neoformans:725 P.troglodytes:725

Q5KNE3              	100.00%		H2R0X5              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for H2R0X5 as seed ortholog is 100%.

Group of orthologs #108. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:571 P.troglodytes:606

Q5KIF1              	100.00%		H2QP02              	100.00%
                    	       		H2QNZ7              	15.72%
                    	       		H2QNZ6              	8.72%
                    	       		H2PY55              	6.02%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for H2QP02 as seed ortholog is 100%.

Group of orthologs #109. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:722 P.troglodytes:722

Q5K7P1              	100.00%		G2HJQ1              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for G2HJQ1 as seed ortholog is 100%.

Group of orthologs #110. Best score 717 bits
Score difference with first non-orthologous sequence - C.neoformans:717 P.troglodytes:717

Q5KMW1              	100.00%		H2QA19              	100.00%
Bootstrap support for Q5KMW1 as seed ortholog is 100%.
Bootstrap support for H2QA19 as seed ortholog is 100%.

Group of orthologs #111. Best score 716 bits
Score difference with first non-orthologous sequence - C.neoformans:716 P.troglodytes:716

Q5KAT3              	100.00%		H2Q5L0              	100.00%
                    	       		H2R1A4              	37.18%
Bootstrap support for Q5KAT3 as seed ortholog is 100%.
Bootstrap support for H2Q5L0 as seed ortholog is 100%.

Group of orthologs #112. Best score 716 bits
Score difference with first non-orthologous sequence - C.neoformans:716 P.troglodytes:716

Q5KI75              	100.00%		H2QNC0              	100.00%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for H2QNC0 as seed ortholog is 100%.

Group of orthologs #113. Best score 712 bits
Score difference with first non-orthologous sequence - C.neoformans:712 P.troglodytes:712

Q5KF07              	100.00%		H2Q8A4              	100.00%
                    	       		H2Q405              	65.83%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for H2Q8A4 as seed ortholog is 100%.

Group of orthologs #114. Best score 711 bits
Score difference with first non-orthologous sequence - C.neoformans:711 P.troglodytes:711

Q5KKE9              	100.00%		H2QB13              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for H2QB13 as seed ortholog is 100%.

Group of orthologs #115. Best score 707 bits
Score difference with first non-orthologous sequence - C.neoformans:707 P.troglodytes:623

P0CO10              	100.00%		H2R934              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for H2R934 as seed ortholog is 100%.

Group of orthologs #116. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:706 P.troglodytes:17

Q5KPX3              	100.00%		H2QPJ4              	100.00%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for H2QPJ4 as seed ortholog is 64%.
Alternative seed ortholog is H2QMM5 (17 bits away from this cluster)

Group of orthologs #117. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:706 P.troglodytes:706

Q5KGM7              	100.00%		H2R801              	100.00%
Bootstrap support for Q5KGM7 as seed ortholog is 100%.
Bootstrap support for H2R801 as seed ortholog is 100%.

Group of orthologs #118. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.troglodytes:207

Q5KMH9              	100.00%		H2R8Y8              	100.00%
Bootstrap support for Q5KMH9 as seed ortholog is 100%.
Bootstrap support for H2R8Y8 as seed ortholog is 99%.

Group of orthologs #119. Best score 705 bits
Score difference with first non-orthologous sequence - C.neoformans:705 P.troglodytes:705

P0CL88              	100.00%		H2QK18              	100.00%
Bootstrap support for P0CL88 as seed ortholog is 100%.
Bootstrap support for H2QK18 as seed ortholog is 100%.

Group of orthologs #120. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:637 P.troglodytes:53

Q5KP06              	100.00%		Q5R1X3              	100.00%
                    	       		H2Q943              	32.14%
                    	       		H2Q1A9              	25.00%
                    	       		H2QE24              	17.86%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for Q5R1X3 as seed ortholog is 98%.

Group of orthologs #121. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:479 P.troglodytes:578

Q5KL42              	100.00%		G2HIL6              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for G2HIL6 as seed ortholog is 100%.

Group of orthologs #122. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:704 P.troglodytes:417

Q5KLP9              	100.00%		H2QIR9              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for H2QIR9 as seed ortholog is 100%.

Group of orthologs #123. Best score 703 bits
Score difference with first non-orthologous sequence - C.neoformans:703 P.troglodytes:703

Q5KK44              	100.00%		H2R361              	100.00%
Q5KK43              	43.85%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for H2R361 as seed ortholog is 100%.

Group of orthologs #124. Best score 703 bits
Score difference with first non-orthologous sequence - C.neoformans:507 P.troglodytes:568

Q5KP40              	100.00%		G2HH56              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for G2HH56 as seed ortholog is 100%.

Group of orthologs #125. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 P.troglodytes:470

Q5KPQ9              	100.00%		H2QBH5              	100.00%
                    	       		H2R2T6              	25.39%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for H2QBH5 as seed ortholog is 100%.

Group of orthologs #126. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:455 P.troglodytes:324

P0CQ98              	100.00%		H2QRI3              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for H2QRI3 as seed ortholog is 100%.

Group of orthologs #127. Best score 697 bits
Score difference with first non-orthologous sequence - C.neoformans:697 P.troglodytes:222

Q5KLI4              	100.00%		H2RIK6              	100.00%
Bootstrap support for Q5KLI4 as seed ortholog is 100%.
Bootstrap support for H2RIK6 as seed ortholog is 100%.

Group of orthologs #128. Best score 696 bits
Score difference with first non-orthologous sequence - C.neoformans:696 P.troglodytes:696

Q5KB97              	100.00%		H2QC76              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for H2QC76 as seed ortholog is 100%.

Group of orthologs #129. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.troglodytes:540

Q5KE94              	100.00%		H2QHY8              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for H2QHY8 as seed ortholog is 100%.

Group of orthologs #130. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 P.troglodytes:236

Q5K8H1              	100.00%		H2R7K5              	100.00%
Bootstrap support for Q5K8H1 as seed ortholog is 100%.
Bootstrap support for H2R7K5 as seed ortholog is 100%.

Group of orthologs #131. Best score 681 bits
Score difference with first non-orthologous sequence - C.neoformans:681 P.troglodytes:681

Q5KLA1              	100.00%		H2PYS9              	100.00%
                    	       		H2R3J0              	44.57%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for H2PYS9 as seed ortholog is 100%.

Group of orthologs #132. Best score 680 bits
Score difference with first non-orthologous sequence - C.neoformans:680 P.troglodytes:589

Q5KGS9              	100.00%		H2QEC5              	100.00%
                    	       		H2R5C0              	10.97%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for H2QEC5 as seed ortholog is 100%.

Group of orthologs #133. Best score 678 bits
Score difference with first non-orthologous sequence - C.neoformans:678 P.troglodytes:411

Q5KLG5              	100.00%		H2QLK2              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for H2QLK2 as seed ortholog is 100%.

Group of orthologs #134. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:676 P.troglodytes:520

Q5KGN2              	100.00%		H2Q8S2              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 100%.
Bootstrap support for H2Q8S2 as seed ortholog is 100%.

Group of orthologs #135. Best score 675 bits
Score difference with first non-orthologous sequence - C.neoformans:675 P.troglodytes:675

Q5KFG6              	100.00%		H2QCM0              	100.00%
Bootstrap support for Q5KFG6 as seed ortholog is 100%.
Bootstrap support for H2QCM0 as seed ortholog is 100%.

Group of orthologs #136. Best score 675 bits
Score difference with first non-orthologous sequence - C.neoformans:675 P.troglodytes:203

P0CQ16              	100.00%		H2R2P6              	100.00%
Bootstrap support for P0CQ16 as seed ortholog is 100%.
Bootstrap support for H2R2P6 as seed ortholog is 99%.

Group of orthologs #137. Best score 675 bits
Score difference with first non-orthologous sequence - C.neoformans:675 P.troglodytes:398

Q5KQ07              	100.00%		H2QT66              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for H2QT66 as seed ortholog is 100%.

Group of orthologs #138. Best score 674 bits
Score difference with first non-orthologous sequence - C.neoformans:674 P.troglodytes:674

P0CO08              	100.00%		H2QZR1              	100.00%
Bootstrap support for P0CO08 as seed ortholog is 100%.
Bootstrap support for H2QZR1 as seed ortholog is 100%.

Group of orthologs #139. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 P.troglodytes:672

Q5K9W1              	100.00%		H2QGX7              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for H2QGX7 as seed ortholog is 100%.

Group of orthologs #140. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:671 P.troglodytes:671

Q5KIN6              	100.00%		H2R9Q4              	100.00%
                    	       		H2QVG4              	36.93%
                    	       		H2Q764              	20.89%
                    	       		H2Q498              	8.16%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for H2R9Q4 as seed ortholog is 100%.

Group of orthologs #141. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:450 P.troglodytes:539

Q5K9H1              	100.00%		G2HJ25              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for G2HJ25 as seed ortholog is 100%.

Group of orthologs #142. Best score 668 bits
Score difference with first non-orthologous sequence - C.neoformans:668 P.troglodytes:230

Q5KJ87              	100.00%		H2QK78              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for H2QK78 as seed ortholog is 100%.

Group of orthologs #143. Best score 667 bits
Score difference with first non-orthologous sequence - C.neoformans:667 P.troglodytes:391

Q5K7N5              	100.00%		H2QW49              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for H2QW49 as seed ortholog is 100%.

Group of orthologs #144. Best score 667 bits
Score difference with first non-orthologous sequence - C.neoformans:667 P.troglodytes:667

Q5KI64              	100.00%		Q0MQI6              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for Q0MQI6 as seed ortholog is 100%.

Group of orthologs #145. Best score 665 bits
Score difference with first non-orthologous sequence - C.neoformans:665 P.troglodytes:390

Q5KFJ3              	100.00%		H2QV16              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for H2QV16 as seed ortholog is 100%.

Group of orthologs #146. Best score 664 bits
Score difference with first non-orthologous sequence - C.neoformans:664 P.troglodytes:578

Q5KKR7              	100.00%		H2QKJ4              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for H2QKJ4 as seed ortholog is 100%.

Group of orthologs #147. Best score 662 bits
Score difference with first non-orthologous sequence - C.neoformans:471 P.troglodytes:562

Q5KBI1              	100.00%		H2QUL9              	100.00%
                    	       		G2HJ75              	64.75%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for H2QUL9 as seed ortholog is 100%.

Group of orthologs #148. Best score 661 bits
Score difference with first non-orthologous sequence - C.neoformans:566 P.troglodytes:661

Q5KLI3              	100.00%		H2Q3W1              	100.00%
                    	       		H2Q992              	21.31%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for H2Q3W1 as seed ortholog is 100%.

Group of orthologs #149. Best score 661 bits
Score difference with first non-orthologous sequence - C.neoformans:661 P.troglodytes:661

P0CM96              	100.00%		H2QJ27              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for H2QJ27 as seed ortholog is 100%.

Group of orthologs #150. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 P.troglodytes:54

Q5KKP9              	100.00%		H2R6M5              	100.00%
                    	       		H2Q9J6              	18.54%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for H2R6M5 as seed ortholog is 78%.

Group of orthologs #151. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:563 P.troglodytes:577

Q5K8L8              	100.00%		H2PZS4              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for H2PZS4 as seed ortholog is 100%.

Group of orthologs #152. Best score 658 bits
Score difference with first non-orthologous sequence - C.neoformans:658 P.troglodytes:658

Q5KKV6              	100.00%		H2Q1E9              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for H2Q1E9 as seed ortholog is 100%.

Group of orthologs #153. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:602 P.troglodytes:657

Q5KEF7              	100.00%		H2R0B2              	100.00%
                    	       		H2Q2W5              	57.84%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for H2R0B2 as seed ortholog is 100%.

Group of orthologs #154. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:657 P.troglodytes:657

Q5KM37              	100.00%		H2R6R5              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for H2R6R5 as seed ortholog is 100%.

Group of orthologs #155. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:656 P.troglodytes:656

Q5KBL4              	100.00%		H2R005              	100.00%
Bootstrap support for Q5KBL4 as seed ortholog is 100%.
Bootstrap support for H2R005 as seed ortholog is 100%.

Group of orthologs #156. Best score 652 bits
Score difference with first non-orthologous sequence - C.neoformans:652 P.troglodytes:652

Q5KEU7              	100.00%		H2QD95              	100.00%
Bootstrap support for Q5KEU7 as seed ortholog is 100%.
Bootstrap support for H2QD95 as seed ortholog is 100%.

Group of orthologs #157. Best score 647 bits
Score difference with first non-orthologous sequence - C.neoformans:647 P.troglodytes:647

Q5KDR3              	100.00%		H2QLR3              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for H2QLR3 as seed ortholog is 100%.

Group of orthologs #158. Best score 644 bits
Score difference with first non-orthologous sequence - C.neoformans:458 P.troglodytes:448

P0CQ72              	100.00%		H2QE09              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for H2QE09 as seed ortholog is 100%.

Group of orthologs #159. Best score 643 bits
Score difference with first non-orthologous sequence - C.neoformans:643 P.troglodytes:516

Q5KDL3              	100.00%		H2QV66              	100.00%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for H2QV66 as seed ortholog is 100%.

Group of orthologs #160. Best score 642 bits
Score difference with first non-orthologous sequence - C.neoformans:642 P.troglodytes:642

Q5KP26              	100.00%		H2RB83              	100.00%
Bootstrap support for Q5KP26 as seed ortholog is 100%.
Bootstrap support for H2RB83 as seed ortholog is 100%.

Group of orthologs #161. Best score 641 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.troglodytes:374

Q5K9Z4              	100.00%		H2QD29              	100.00%
                    	       		H2QD30              	93.70%
Bootstrap support for Q5K9Z4 as seed ortholog is 100%.
Bootstrap support for H2QD29 as seed ortholog is 100%.

Group of orthologs #162. Best score 639 bits
Score difference with first non-orthologous sequence - C.neoformans:639 P.troglodytes:639

Q5KMJ4              	100.00%		H2QIP7              	100.00%
                    	       		H2Q7Q4              	42.99%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for H2QIP7 as seed ortholog is 100%.

Group of orthologs #163. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:636 P.troglodytes:636

Q5KAN4              	100.00%		H2R059              	100.00%
                    	       		H2RBN9              	45.56%
                    	       		H2Q1J5              	41.85%
Bootstrap support for Q5KAN4 as seed ortholog is 100%.
Bootstrap support for H2R059 as seed ortholog is 100%.

Group of orthologs #164. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:636 P.troglodytes:636

Q5KIL6              	100.00%		H2R1N5              	100.00%
Bootstrap support for Q5KIL6 as seed ortholog is 100%.
Bootstrap support for H2R1N5 as seed ortholog is 100%.

Group of orthologs #165. Best score 635 bits
Score difference with first non-orthologous sequence - C.neoformans:635 P.troglodytes:635

Q5KC69              	100.00%		H2QNA9              	100.00%
                    	       		H2R7U3              	82.32%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for H2QNA9 as seed ortholog is 100%.

Group of orthologs #166. Best score 632 bits
Score difference with first non-orthologous sequence - C.neoformans:632 P.troglodytes:484

Q5K8D2              	100.00%		H2QPE2              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for H2QPE2 as seed ortholog is 100%.

Group of orthologs #167. Best score 632 bits
Score difference with first non-orthologous sequence - C.neoformans:550 P.troglodytes:36

Q5KN48              	100.00%		H2QK41              	100.00%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for H2QK41 as seed ortholog is 83%.

Group of orthologs #168. Best score 631 bits
Score difference with first non-orthologous sequence - C.neoformans:445 P.troglodytes:224

Q5K745              	100.00%		G2HEC7              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for G2HEC7 as seed ortholog is 100%.

Group of orthologs #169. Best score 631 bits
Score difference with first non-orthologous sequence - C.neoformans:423 P.troglodytes:358

Q5KE58              	100.00%		H2QS42              	100.00%
Bootstrap support for Q5KE58 as seed ortholog is 100%.
Bootstrap support for H2QS42 as seed ortholog is 100%.

Group of orthologs #170. Best score 630 bits
Score difference with first non-orthologous sequence - C.neoformans:630 P.troglodytes:630

Q5KD08              	100.00%		H2RAD7              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for H2RAD7 as seed ortholog is 100%.

Group of orthologs #171. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 P.troglodytes:628

P0CQ22              	100.00%		H2Q7Y1              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for H2Q7Y1 as seed ortholog is 100%.

Group of orthologs #172. Best score 627 bits
Score difference with first non-orthologous sequence - C.neoformans:627 P.troglodytes:487

Q5K6Z8              	100.00%		H2Q157              	100.00%
Bootstrap support for Q5K6Z8 as seed ortholog is 100%.
Bootstrap support for H2Q157 as seed ortholog is 100%.

Group of orthologs #173. Best score 625 bits
Score difference with first non-orthologous sequence - C.neoformans:625 P.troglodytes:92

Q5KCZ4              	100.00%		H2QT14              	100.00%
                    	       		H2Q8X8              	34.41%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for H2QT14 as seed ortholog is 98%.

Group of orthologs #174. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:444 P.troglodytes:192

Q5KAU0              	100.00%		H2QNU9              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 100%.
Bootstrap support for H2QNU9 as seed ortholog is 99%.

Group of orthologs #175. Best score 621 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:439

Q5KB11              	100.00%		H2QGQ5              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for H2QGQ5 as seed ortholog is 100%.

Group of orthologs #176. Best score 618 bits
Score difference with first non-orthologous sequence - C.neoformans:334 P.troglodytes:370

P0CQ88              	100.00%		H2Q5T8              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 100%.
Bootstrap support for H2Q5T8 as seed ortholog is 100%.

Group of orthologs #177. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:617 P.troglodytes:441

Q5KAP2              	100.00%		H2RBT3              	100.00%
Bootstrap support for Q5KAP2 as seed ortholog is 100%.
Bootstrap support for H2RBT3 as seed ortholog is 100%.

Group of orthologs #178. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:617

P0CO92              	100.00%		H2RI28              	100.00%
Bootstrap support for P0CO92 as seed ortholog is 100%.
Bootstrap support for H2RI28 as seed ortholog is 100%.

Group of orthologs #179. Best score 612 bits
Score difference with first non-orthologous sequence - C.neoformans:612 P.troglodytes:612

P0CR28              	100.00%		H2QGT6              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for H2QGT6 as seed ortholog is 100%.

Group of orthologs #180. Best score 611 bits
Score difference with first non-orthologous sequence - C.neoformans:611 P.troglodytes:611

P0CR26              	100.00%		G2HJD7              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for G2HJD7 as seed ortholog is 100%.

Group of orthologs #181. Best score 611 bits
Score difference with first non-orthologous sequence - C.neoformans:611 P.troglodytes:611

Q5KCZ2              	100.00%		Q0MQG5              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for Q0MQG5 as seed ortholog is 100%.

Group of orthologs #182. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:609 P.troglodytes:609

Q5K9K1              	100.00%		H2QND4              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for H2QND4 as seed ortholog is 100%.

Group of orthologs #183. Best score 608 bits
Score difference with first non-orthologous sequence - C.neoformans:401 P.troglodytes:409

P0CQ84              	100.00%		H2QIL6              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for H2QIL6 as seed ortholog is 100%.

Group of orthologs #184. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:407 P.troglodytes:406

P0CQ70              	100.00%		G2HFF4              	100.00%
                    	       		A5A6N4              	64.42%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for G2HFF4 as seed ortholog is 100%.

Group of orthologs #185. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:601

Q5KF65              	100.00%		H2R700              	100.00%
                    	       		H2RGL2              	40.26%
Bootstrap support for Q5KF65 as seed ortholog is 98%.
Bootstrap support for H2R700 as seed ortholog is 100%.

Group of orthologs #186. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:386 P.troglodytes:460

Q5KLV5              	100.00%		H2QGB8              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for H2QGB8 as seed ortholog is 100%.

Group of orthologs #187. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:600 P.troglodytes:600

Q5K7K5              	100.00%		H2QH17              	100.00%
                    	       		H2Q4R4              	72.50%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for H2QH17 as seed ortholog is 100%.

Group of orthologs #188. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:600 P.troglodytes:600

Q5KP44              	100.00%		H2QVB7              	100.00%
                    	       		H2R178              	47.40%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for H2QVB7 as seed ortholog is 100%.

Group of orthologs #189. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:408 P.troglodytes:407

Q5KII1              	100.00%		H2PYY5              	100.00%
Bootstrap support for Q5KII1 as seed ortholog is 100%.
Bootstrap support for H2PYY5 as seed ortholog is 100%.

Group of orthologs #190. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:600 P.troglodytes:600

Q5KIZ9              	100.00%		H2QDA3              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for H2QDA3 as seed ortholog is 100%.

Group of orthologs #191. Best score 599 bits
Score difference with first non-orthologous sequence - C.neoformans:599 P.troglodytes:557

Q5K7B5              	100.00%		H2PZ62              	100.00%
                    	       		H2QXB7              	38.94%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for H2PZ62 as seed ortholog is 100%.

Group of orthologs #192. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:597 P.troglodytes:405

Q5KDW0              	100.00%		H2QFP2              	100.00%
                    	       		H2QFC2              	34.40%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for H2QFP2 as seed ortholog is 100%.

Group of orthologs #193. Best score 594 bits
Score difference with first non-orthologous sequence - C.neoformans:594 P.troglodytes:594

Q5KFS5              	100.00%		H2R5E9              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for H2R5E9 as seed ortholog is 100%.

Group of orthologs #194. Best score 590 bits
Score difference with first non-orthologous sequence - C.neoformans:491 P.troglodytes:590

Q5KBB1              	100.00%		H2QBJ3              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for H2QBJ3 as seed ortholog is 100%.

Group of orthologs #195. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:399 P.troglodytes:221

P0CQ76              	100.00%		H2R7C9              	100.00%
                    	       		A5A6J2              	23.26%
Bootstrap support for P0CQ76 as seed ortholog is 100%.
Bootstrap support for H2R7C9 as seed ortholog is 100%.

Group of orthologs #196. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 P.troglodytes:137

Q5KKT5              	100.00%		H2QNT3              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for H2QNT3 as seed ortholog is 99%.

Group of orthologs #197. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 P.troglodytes:589

Q5KMG4              	100.00%		H2QQZ6              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for H2QQZ6 as seed ortholog is 100%.

Group of orthologs #198. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 P.troglodytes:589

Q5KIH6              	100.00%		H2QZB5              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for H2QZB5 as seed ortholog is 100%.

Group of orthologs #199. Best score 588 bits
Score difference with first non-orthologous sequence - C.neoformans:588 P.troglodytes:588

Q5KE09              	100.00%		H2R5G4              	100.00%
Bootstrap support for Q5KE09 as seed ortholog is 100%.
Bootstrap support for H2R5G4 as seed ortholog is 100%.

Group of orthologs #200. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:586 P.troglodytes:586

Q5KEV3              	100.00%		H2QYF2              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for H2QYF2 as seed ortholog is 100%.

Group of orthologs #201. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 P.troglodytes:585

Q5KLU5              	100.00%		H2R306              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for H2R306 as seed ortholog is 100%.

Group of orthologs #202. Best score 584 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:584

Q5KAC2              	100.00%		H2QPY6              	100.00%
                    	       		H2Q237              	62.08%
                    	       		H2QVV0              	56.14%
Bootstrap support for Q5KAC2 as seed ortholog is 100%.
Bootstrap support for H2QPY6 as seed ortholog is 100%.

Group of orthologs #203. Best score 584 bits
Score difference with first non-orthologous sequence - C.neoformans:584 P.troglodytes:218

Q5KNG1              	100.00%		H2QZJ7              	100.00%
                    	       		H2QSC4              	41.17%
Bootstrap support for Q5KNG1 as seed ortholog is 100%.
Bootstrap support for H2QZJ7 as seed ortholog is 99%.

Group of orthologs #204. Best score 584 bits
Score difference with first non-orthologous sequence - C.neoformans:584 P.troglodytes:584

Q5K899              	100.00%		H2QPC9              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for H2QPC9 as seed ortholog is 100%.

Group of orthologs #205. Best score 583 bits
Score difference with first non-orthologous sequence - C.neoformans:424 P.troglodytes:391

P0CQ96              	100.00%		P60024              	100.00%
                    	       		H2QFK3              	23.79%
Bootstrap support for P0CQ96 as seed ortholog is 100%.
Bootstrap support for P60024 as seed ortholog is 100%.

Group of orthologs #206. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 P.troglodytes:240

Q5KB93              	100.00%		H2QHZ9              	100.00%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for H2QHZ9 as seed ortholog is 100%.

Group of orthologs #207. Best score 581 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.troglodytes:337

Q5K7L0              	100.00%		H2QRH2              	100.00%
                    	       		H2QQ54              	46.45%
                    	       		H2Q7D9              	46.18%
Bootstrap support for Q5K7L0 as seed ortholog is 100%.
Bootstrap support for H2QRH2 as seed ortholog is 100%.

Group of orthologs #208. Best score 581 bits
Score difference with first non-orthologous sequence - C.neoformans:581 P.troglodytes:581

Q5KJR9              	100.00%		H2QRK7              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for H2QRK7 as seed ortholog is 100%.

Group of orthologs #209. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.troglodytes:318

Q5KIC0              	100.00%		H2R0E4              	100.00%
                    	       		H2R244              	74.44%
                    	       		H2R410              	46.96%
                    	       		H2QZ95              	23.18%
Bootstrap support for Q5KIC0 as seed ortholog is 99%.
Bootstrap support for H2R0E4 as seed ortholog is 99%.

Group of orthologs #210. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:580

Q5KME1              	100.00%		H2QHP3              	100.00%
                    	       		H2Q6V7              	16.35%
                    	       		H2Q6V8              	13.46%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for H2QHP3 as seed ortholog is 100%.

Group of orthologs #211. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 P.troglodytes:580

Q5KM80              	100.00%		H2R1Q9              	100.00%
                    	       		H2QYN1              	22.26%
Bootstrap support for Q5KM80 as seed ortholog is 100%.
Bootstrap support for H2R1Q9 as seed ortholog is 100%.

Group of orthologs #212. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 P.troglodytes:579

Q5KI16              	100.00%		H2QHI2              	100.00%
                    	       		H2QWN8              	25.47%
Bootstrap support for Q5KI16 as seed ortholog is 100%.
Bootstrap support for H2QHI2 as seed ortholog is 100%.

Group of orthologs #213. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 P.troglodytes:434

Q5K7R3              	100.00%		H2Q3J1              	100.00%
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for H2Q3J1 as seed ortholog is 100%.

Group of orthologs #214. Best score 578 bits
Score difference with first non-orthologous sequence - C.neoformans:578 P.troglodytes:578

Q5K7C3              	100.00%		H2QT77              	100.00%
Bootstrap support for Q5K7C3 as seed ortholog is 100%.
Bootstrap support for H2QT77 as seed ortholog is 100%.

Group of orthologs #215. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:576 P.troglodytes:402

Q5KA27              	100.00%		H2Q8B6              	100.00%
Bootstrap support for Q5KA27 as seed ortholog is 100%.
Bootstrap support for H2Q8B6 as seed ortholog is 100%.

Group of orthologs #216. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:576 P.troglodytes:376

Q5KHR6              	100.00%		H2QK98              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for H2QK98 as seed ortholog is 100%.

Group of orthologs #217. Best score 575 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:133

Q5KK89              	100.00%		H2Q5Q0              	100.00%
Bootstrap support for Q5KK89 as seed ortholog is 99%.
Bootstrap support for H2Q5Q0 as seed ortholog is 99%.

Group of orthologs #218. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 P.troglodytes:574

Q5K6X3              	100.00%		H2Q1J0              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for H2Q1J0 as seed ortholog is 100%.

Group of orthologs #219. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 P.troglodytes:574

Q5KBH1              	100.00%		H2QUG3              	100.00%
Bootstrap support for Q5KBH1 as seed ortholog is 100%.
Bootstrap support for H2QUG3 as seed ortholog is 100%.

Group of orthologs #220. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 P.troglodytes:408

Q5KHN7              	100.00%		H2QV83              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for H2QV83 as seed ortholog is 100%.

Group of orthologs #221. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.troglodytes:171

P0CQ74              	100.00%		Q6GVM6              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for Q6GVM6 as seed ortholog is 99%.

Group of orthologs #222. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 P.troglodytes:574

Q5KMQ2              	100.00%		H2R5M8              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for H2R5M8 as seed ortholog is 100%.

Group of orthologs #223. Best score 573 bits
Score difference with first non-orthologous sequence - C.neoformans:573 P.troglodytes:118

Q5KHZ4              	100.00%		H2PYJ7              	100.00%
                    	       		H2QTM3              	68.85%
                    	       		H2QN78              	60.25%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for H2PYJ7 as seed ortholog is 99%.

Group of orthologs #224. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:479

Q5KLA7              	100.00%		G2HFA5              	100.00%
                    	       		H2QBZ4              	56.06%
Bootstrap support for Q5KLA7 as seed ortholog is 99%.
Bootstrap support for G2HFA5 as seed ortholog is 100%.

Group of orthologs #225. Best score 568 bits
Score difference with first non-orthologous sequence - C.neoformans:568 P.troglodytes:477

Q5KDZ3              	100.00%		H2QTJ6              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 100%.
Bootstrap support for H2QTJ6 as seed ortholog is 100%.

Group of orthologs #226. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:398 P.troglodytes:347

P0CQ80              	100.00%		H2R2Z3              	100.00%
Bootstrap support for P0CQ80 as seed ortholog is 100%.
Bootstrap support for H2R2Z3 as seed ortholog is 100%.

Group of orthologs #227. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:567 P.troglodytes:567

Q5KIW8              	100.00%		H2RAZ2              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for H2RAZ2 as seed ortholog is 100%.

Group of orthologs #228. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 P.troglodytes:564

Q5K9Q6              	100.00%		H2Q6F1              	100.00%
                    	       		H2QM32              	53.49%
Bootstrap support for Q5K9Q6 as seed ortholog is 100%.
Bootstrap support for H2Q6F1 as seed ortholog is 100%.

Group of orthologs #229. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 P.troglodytes:564

P0CP36              	100.00%		H2QF65              	100.00%
                    	       		H2QY85              	39.20%
Bootstrap support for P0CP36 as seed ortholog is 100%.
Bootstrap support for H2QF65 as seed ortholog is 100%.

Group of orthologs #230. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 P.troglodytes:31

Q5KC94              	100.00%		H2RCB1              	100.00%
                    	       		H2Q9H4              	28.89%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for H2RCB1 as seed ortholog is 67%.
Alternative seed ortholog is H2QWD9 (31 bits away from this cluster)

Group of orthologs #231. Best score 563 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:132

Q5KE28              	100.00%		H2QQ49              	100.00%
Bootstrap support for Q5KE28 as seed ortholog is 99%.
Bootstrap support for H2QQ49 as seed ortholog is 99%.

Group of orthologs #232. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:562 P.troglodytes:236

Q5KIA2              	100.00%		H2QJK1              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for H2QJK1 as seed ortholog is 99%.

Group of orthologs #233. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 P.troglodytes:415

Q5K722              	100.00%		H2Q7L5              	100.00%
                    	       		H2R298              	42.86%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for H2Q7L5 as seed ortholog is 100%.

Group of orthologs #234. Best score 556 bits
Score difference with first non-orthologous sequence - C.neoformans:556 P.troglodytes:556

Q5KLT9              	100.00%		H2QJB5              	100.00%
                    	       		H2QA29              	10.84%
Bootstrap support for Q5KLT9 as seed ortholog is 100%.
Bootstrap support for H2QJB5 as seed ortholog is 100%.

Group of orthologs #235. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 P.troglodytes:181

P0CP46              	100.00%		H2QZS4              	100.00%
                    	       		H2R0X7              	43.37%
                    	       		H2QKE9              	31.83%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for H2QZS4 as seed ortholog is 99%.

Group of orthologs #236. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:451

Q5KGH3              	100.00%		H2QRH7              	100.00%
Bootstrap support for Q5KGH3 as seed ortholog is 100%.
Bootstrap support for H2QRH7 as seed ortholog is 100%.

Group of orthologs #237. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 P.troglodytes:216

Q5KAU9              	100.00%		H2R419              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for H2R419 as seed ortholog is 100%.

Group of orthologs #238. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 P.troglodytes:549

Q5KP62              	100.00%		H2QI93              	100.00%
                    	       		H2Q259              	59.76%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for H2QI93 as seed ortholog is 100%.

Group of orthologs #239. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 P.troglodytes:547

Q5KB99              	100.00%		H2QKC9              	100.00%
                    	       		A9Q1D5              	30.36%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for H2QKC9 as seed ortholog is 100%.

Group of orthologs #240. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:12

Q5KKV8              	100.00%		H2R7B1              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 90%.
Bootstrap support for H2R7B1 as seed ortholog is 59%.
Alternative seed ortholog is H2RC08 (12 bits away from this cluster)

Group of orthologs #241. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 P.troglodytes:545

Q5KE01              	100.00%		A5A6K4              	100.00%
                    	       		H2QT58              	70.57%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for A5A6K4 as seed ortholog is 100%.

Group of orthologs #242. Best score 544 bits
Score difference with first non-orthologous sequence - C.neoformans:544 P.troglodytes:544

P0CM88              	100.00%		G2HFH0              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for G2HFH0 as seed ortholog is 100%.

Group of orthologs #243. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:482 P.troglodytes:297

Q5KHV9              	100.00%		H2QVN4              	100.00%
                    	       		H2QIL4              	81.39%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for H2QVN4 as seed ortholog is 100%.

Group of orthologs #244. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:542 P.troglodytes:542

Q5KNE7              	100.00%		H2Q9U1              	100.00%
Bootstrap support for Q5KNE7 as seed ortholog is 100%.
Bootstrap support for H2Q9U1 as seed ortholog is 100%.

Group of orthologs #245. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:542 P.troglodytes:438

Q5K749              	100.00%		H2QRG6              	100.00%
Bootstrap support for Q5K749 as seed ortholog is 100%.
Bootstrap support for H2QRG6 as seed ortholog is 100%.

Group of orthologs #246. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:329

Q5KGF6              	100.00%		H2QQF0              	100.00%
                    	       		H2R0Q0              	51.71%
                    	       		H2QYA0              	21.45%
Bootstrap support for Q5KGF6 as seed ortholog is 72%.
Alternative seed ortholog is Q5K9H6 (44 bits away from this cluster)
Bootstrap support for H2QQF0 as seed ortholog is 100%.

Group of orthologs #247. Best score 540 bits
Score difference with first non-orthologous sequence - C.neoformans:540 P.troglodytes:540

Q5KKA5              	100.00%		H2RC86              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for H2RC86 as seed ortholog is 100%.

Group of orthologs #248. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:241 P.troglodytes:168

P0CR00              	100.00%		G2HGR8              	100.00%
Bootstrap support for P0CR00 as seed ortholog is 100%.
Bootstrap support for G2HGR8 as seed ortholog is 100%.

Group of orthologs #249. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:118

Q5KLG6              	100.00%		H2QHS5              	100.00%
                    	       		H2QNM0              	5.80%
Bootstrap support for Q5KLG6 as seed ortholog is 90%.
Bootstrap support for H2QHS5 as seed ortholog is 97%.

Group of orthologs #250. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:450 P.troglodytes:534

Q5KI46              	100.00%		H2Q6B5              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for H2Q6B5 as seed ortholog is 100%.

Group of orthologs #251. Best score 533 bits
Score difference with first non-orthologous sequence - C.neoformans:533 P.troglodytes:493

Q5KF37              	100.00%		H2RCR7              	100.00%
                    	       		H2R9V8              	67.89%
                    	       		H2Q2S6              	65.01%
                    	       		H2QP63              	64.23%
Bootstrap support for Q5KF37 as seed ortholog is 100%.
Bootstrap support for H2RCR7 as seed ortholog is 100%.

Group of orthologs #252. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:532 P.troglodytes:532

Q5KHN4              	100.00%		H2Q0X2              	100.00%
                    	       		H2RBQ9              	40.79%
                    	       		Q5XUN4              	29.03%
                    	       		H2QZD0              	16.07%
Bootstrap support for Q5KHN4 as seed ortholog is 100%.
Bootstrap support for H2Q0X2 as seed ortholog is 100%.

Group of orthologs #253. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 P.troglodytes:530

Q5KII4              	100.00%		H2QRB0              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for H2QRB0 as seed ortholog is 100%.

Group of orthologs #254. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 P.troglodytes:302

Q5KKU4              	100.00%		H2QR16              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for H2QR16 as seed ortholog is 100%.

Group of orthologs #255. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 P.troglodytes:530

Q5KCT5              	100.00%		H2R760              	100.00%
Bootstrap support for Q5KCT5 as seed ortholog is 100%.
Bootstrap support for H2R760 as seed ortholog is 100%.

Group of orthologs #256. Best score 528 bits
Score difference with first non-orthologous sequence - C.neoformans:528 P.troglodytes:528

Q5KK90              	100.00%		G2HDY3              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for G2HDY3 as seed ortholog is 100%.

Group of orthologs #257. Best score 528 bits
Score difference with first non-orthologous sequence - C.neoformans:528 P.troglodytes:528

Q5KFJ7              	100.00%		H2Q1L9              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for H2Q1L9 as seed ortholog is 100%.

Group of orthologs #258. Best score 526 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:95

Q5KEX3              	100.00%		H2Q9I2              	100.00%
                    	       		G2HJM2              	45.81%
                    	       		H2QA58              	43.27%
                    	       		H2QXA8              	34.70%
                    	       		H2Q6W4              	17.15%
Bootstrap support for Q5KEX3 as seed ortholog is 98%.
Bootstrap support for H2Q9I2 as seed ortholog is 99%.

Group of orthologs #259. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:525 P.troglodytes:525

Q5KGK2              	100.00%		G2HGR6              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 100%.
Bootstrap support for G2HGR6 as seed ortholog is 100%.

Group of orthologs #260. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:525 P.troglodytes:525

Q5KG72              	100.00%		H2QMA1              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for H2QMA1 as seed ortholog is 100%.

Group of orthologs #261. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:386 P.troglodytes:524

Q5KH38              	100.00%		G2HEW3              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for G2HEW3 as seed ortholog is 100%.

Group of orthologs #262. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:524 P.troglodytes:524

Q5KEN6              	100.00%		H2QR35              	100.00%
Bootstrap support for Q5KEN6 as seed ortholog is 100%.
Bootstrap support for H2QR35 as seed ortholog is 100%.

Group of orthologs #263. Best score 523 bits
Score difference with first non-orthologous sequence - C.neoformans:523 P.troglodytes:523

Q5KHJ1              	100.00%		H2QIS1              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 100%.
Bootstrap support for H2QIS1 as seed ortholog is 100%.

Group of orthologs #264. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.troglodytes:361

Q5KHQ8              	100.00%		G2HJD3              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for G2HJD3 as seed ortholog is 100%.

Group of orthologs #265. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:519 P.troglodytes:519

Q5KK33              	100.00%		H2RBX6              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for H2RBX6 as seed ortholog is 100%.

Group of orthologs #266. Best score 518 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:122

Q5K7X5              	100.00%		H2QB89              	100.00%
Q5K826              	25.71%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for H2QB89 as seed ortholog is 99%.

Group of orthologs #267. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 P.troglodytes:517

Q5K9R3              	100.00%		H2RF90              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for H2RF90 as seed ortholog is 100%.

Group of orthologs #268. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:516 P.troglodytes:148

Q5K960              	100.00%		H2Q2A9              	100.00%
Bootstrap support for Q5K960 as seed ortholog is 100%.
Bootstrap support for H2Q2A9 as seed ortholog is 98%.

Group of orthologs #269. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 P.troglodytes:514

P0CO94              	100.00%		H2QT39              	100.00%
Bootstrap support for P0CO94 as seed ortholog is 100%.
Bootstrap support for H2QT39 as seed ortholog is 100%.

Group of orthologs #270. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:514

Q5KCS8              	100.00%		H2QRN6              	100.00%
Bootstrap support for Q5KCS8 as seed ortholog is 96%.
Bootstrap support for H2QRN6 as seed ortholog is 100%.

Group of orthologs #271. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 P.troglodytes:253

Q5KC30              	100.00%		H2QEN0              	100.00%
                    	       		H2RA25              	55.23%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for H2QEN0 as seed ortholog is 100%.

Group of orthologs #272. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 P.troglodytes:512

P0CR40              	100.00%		H2QQ07              	100.00%
                    	       		H2R5C3              	35.80%
Bootstrap support for P0CR40 as seed ortholog is 100%.
Bootstrap support for H2QQ07 as seed ortholog is 100%.

Group of orthologs #273. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 P.troglodytes:510

Q5KJN5              	100.00%		H2R491              	100.00%
                    	       		H2Q9U2              	31.07%
Bootstrap support for Q5KJN5 as seed ortholog is 100%.
Bootstrap support for H2R491 as seed ortholog is 100%.

Group of orthologs #274. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 P.troglodytes:508

Q5KAU8              	100.00%		H2QCE4              	100.00%
                    	       		H2Q6A8              	19.87%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for H2QCE4 as seed ortholog is 100%.

Group of orthologs #275. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 P.troglodytes:508

P0CR52              	100.00%		H2QRX9              	100.00%
Bootstrap support for P0CR52 as seed ortholog is 100%.
Bootstrap support for H2QRX9 as seed ortholog is 100%.

Group of orthologs #276. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 P.troglodytes:507

Q5KGD7              	100.00%		H2Q1Z5              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for H2Q1Z5 as seed ortholog is 100%.

Group of orthologs #277. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 P.troglodytes:347

Q5KDQ7              	100.00%		H2QAU9              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for H2QAU9 as seed ortholog is 100%.

Group of orthologs #278. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 P.troglodytes:507

Q5KGH1              	100.00%		H2Q862              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for H2Q862 as seed ortholog is 100%.

Group of orthologs #279. Best score 504 bits
Score difference with first non-orthologous sequence - C.neoformans:504 P.troglodytes:504

Q5KMC0              	100.00%		H2R7K6              	100.00%
Bootstrap support for Q5KMC0 as seed ortholog is 100%.
Bootstrap support for H2R7K6 as seed ortholog is 100%.

Group of orthologs #280. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 P.troglodytes:501

Q5KKB8              	100.00%		H2Q364              	100.00%
                    	       		H2PZQ6              	39.82%
                    	       		H2PZL1              	20.92%
Bootstrap support for Q5KKB8 as seed ortholog is 100%.
Bootstrap support for H2Q364 as seed ortholog is 100%.

Group of orthologs #281. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 P.troglodytes:178

Q5KKS9              	100.00%		H2Q1R6              	100.00%
Bootstrap support for Q5KKS9 as seed ortholog is 100%.
Bootstrap support for H2Q1R6 as seed ortholog is 100%.

Group of orthologs #282. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:427 P.troglodytes:117

Q5KJ82              	100.00%		H2QVM9              	100.00%
Bootstrap support for Q5KJ82 as seed ortholog is 100%.
Bootstrap support for H2QVM9 as seed ortholog is 99%.

Group of orthologs #283. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 P.troglodytes:500

Q5KKG6              	100.00%		H2Q9R0              	100.00%
                    	       		H2RBP4              	34.12%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for H2Q9R0 as seed ortholog is 100%.

Group of orthologs #284. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:405 P.troglodytes:92

Q5KPW4              	100.00%		H2Q2H7              	100.00%
                    	       		H2QIE2              	100.00%
Bootstrap support for Q5KPW4 as seed ortholog is 100%.
Bootstrap support for H2Q2H7 as seed ortholog is 99%.
Bootstrap support for H2QIE2 as seed ortholog is 99%.

Group of orthologs #285. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.troglodytes:45

Q5KI40              	100.00%		H2QE47              	100.00%
                    	       		H2R0C8              	58.02%
Bootstrap support for Q5KI40 as seed ortholog is 100%.
Bootstrap support for H2QE47 as seed ortholog is 91%.

Group of orthologs #286. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 P.troglodytes:498

Q5KGI0              	100.00%		H2QIJ4              	100.00%
Bootstrap support for Q5KGI0 as seed ortholog is 100%.
Bootstrap support for H2QIJ4 as seed ortholog is 100%.

Group of orthologs #287. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 P.troglodytes:497

Q5KEK9              	100.00%		H2R4A9              	100.00%
                    	       		P60028              	76.31%
Bootstrap support for Q5KEK9 as seed ortholog is 100%.
Bootstrap support for H2R4A9 as seed ortholog is 100%.

Group of orthologs #288. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:365 P.troglodytes:361

Q5KCW4              	100.00%		H2PY66              	100.00%
Bootstrap support for Q5KCW4 as seed ortholog is 100%.
Bootstrap support for H2PY66 as seed ortholog is 100%.

Group of orthologs #289. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:495

Q5KAF1              	100.00%		H2Q8P3              	100.00%
Bootstrap support for Q5KAF1 as seed ortholog is 82%.
Bootstrap support for H2Q8P3 as seed ortholog is 100%.

Group of orthologs #290. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 P.troglodytes:339

P0CQ82              	100.00%		H2Q4Q4              	100.00%
Bootstrap support for P0CQ82 as seed ortholog is 100%.
Bootstrap support for H2Q4Q4 as seed ortholog is 100%.

Group of orthologs #291. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:61

Q5K9A0              	100.00%		H2Q2K1              	100.00%
Bootstrap support for Q5K9A0 as seed ortholog is 99%.
Bootstrap support for H2Q2K1 as seed ortholog is 89%.

Group of orthologs #292. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 P.troglodytes:493

Q5KCK2              	100.00%		H2R287              	100.00%
Bootstrap support for Q5KCK2 as seed ortholog is 100%.
Bootstrap support for H2R287 as seed ortholog is 100%.

Group of orthologs #293. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 P.troglodytes:493

Q5KKQ6              	100.00%		H2R7Q8              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for H2R7Q8 as seed ortholog is 100%.

Group of orthologs #294. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:155

Q5KMG1              	100.00%		H2Q1B1              	100.00%
Q5K8R8              	13.24%		
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for H2Q1B1 as seed ortholog is 99%.

Group of orthologs #295. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 P.troglodytes:492

Q5KAB8              	100.00%		G2HG47              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for G2HG47 as seed ortholog is 100%.

Group of orthologs #296. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 P.troglodytes:492

P0CS78              	100.00%		H2QDN5              	100.00%
Bootstrap support for P0CS78 as seed ortholog is 100%.
Bootstrap support for H2QDN5 as seed ortholog is 100%.

Group of orthologs #297. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:492

Q5KQ22              	100.00%		H2QMK8              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for H2QMK8 as seed ortholog is 100%.

Group of orthologs #298. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.troglodytes:333

Q5KP72              	100.00%		H2RA87              	100.00%
Bootstrap support for Q5KP72 as seed ortholog is 99%.
Bootstrap support for H2RA87 as seed ortholog is 100%.

Group of orthologs #299. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.troglodytes:53

P0CN74              	100.00%		H2Q5A6              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 100%.
Bootstrap support for H2Q5A6 as seed ortholog is 96%.

Group of orthologs #300. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:490 P.troglodytes:490

Q5KKJ5              	100.00%		H2QLI6              	100.00%
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for H2QLI6 as seed ortholog is 100%.

Group of orthologs #301. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:488 P.troglodytes:488

Q5K9E3              	100.00%		H2QAB5              	100.00%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for H2QAB5 as seed ortholog is 100%.

Group of orthologs #302. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:487 P.troglodytes:356

Q5KF83              	100.00%		H2R7K4              	100.00%
                    	       		H2QNS7              	44.66%
Bootstrap support for Q5KF83 as seed ortholog is 100%.
Bootstrap support for H2R7K4 as seed ortholog is 100%.

Group of orthologs #303. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:487 P.troglodytes:487

Q5K972              	100.00%		H2Q5A5              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for H2Q5A5 as seed ortholog is 100%.

Group of orthologs #304. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:485 P.troglodytes:485

Q5KPT1              	100.00%		G2HGZ3              	100.00%
                    	       		H2QEQ1              	9.98%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for G2HGZ3 as seed ortholog is 100%.

Group of orthologs #305. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:273 P.troglodytes:324

Q5K9A8              	100.00%		H2QHW0              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 99%.
Bootstrap support for H2QHW0 as seed ortholog is 100%.

Group of orthologs #306. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.troglodytes:332

Q5KHS6              	100.00%		H2QCP3              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 100%.
Bootstrap support for H2QCP3 as seed ortholog is 100%.

Group of orthologs #307. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:401 P.troglodytes:349

Q5KJC6              	100.00%		H2Q8P9              	100.00%
                    	       		H2RCY8              	44.85%
Bootstrap support for Q5KJC6 as seed ortholog is 100%.
Bootstrap support for H2Q8P9 as seed ortholog is 100%.

Group of orthologs #308. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:483 P.troglodytes:388

Q5KNC3              	100.00%		H2Q966              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for H2Q966 as seed ortholog is 100%.

Group of orthologs #309. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:424 P.troglodytes:348

Q5KCJ8              	100.00%		H2QZD6              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for H2QZD6 as seed ortholog is 100%.

Group of orthologs #310. Best score 481 bits
Score difference with first non-orthologous sequence - C.neoformans:481 P.troglodytes:243

Q5KII9              	100.00%		G2HHT4              	100.00%
                    	       		H2R0L8              	81.53%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for G2HHT4 as seed ortholog is 100%.

Group of orthologs #311. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:340 P.troglodytes:338

Q5KF69              	100.00%		H2QJS7              	100.00%
                    	       		H2RA57              	16.24%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for H2QJS7 as seed ortholog is 100%.

Group of orthologs #312. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:323 P.troglodytes:312

Q5KMR8              	100.00%		H2QGF9              	100.00%
                    	       		H2QN60              	25.05%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for H2QGF9 as seed ortholog is 100%.

Group of orthologs #313. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:478

Q5K8Q9              	100.00%		H2PY11              	100.00%
Bootstrap support for Q5K8Q9 as seed ortholog is 96%.
Bootstrap support for H2PY11 as seed ortholog is 100%.

Group of orthologs #314. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 P.troglodytes:120

Q5KI86              	100.00%		H2QV39              	100.00%
                    	       		H2QNS5              	75.22%
                    	       		H2R3A6              	43.36%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for H2QV39 as seed ortholog is 99%.

Group of orthologs #315. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 P.troglodytes:476

Q5KM85              	100.00%		H2R5M9              	100.00%
                    	       		H2QA32              	51.25%
                    	       		H2R8K2              	27.56%
Bootstrap support for Q5KM85 as seed ortholog is 100%.
Bootstrap support for H2R5M9 as seed ortholog is 100%.

Group of orthologs #316. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 P.troglodytes:198

Q5KH19              	100.00%		H2QVZ8              	100.00%
Bootstrap support for Q5KH19 as seed ortholog is 100%.
Bootstrap support for H2QVZ8 as seed ortholog is 100%.

Group of orthologs #317. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 P.troglodytes:186

Q5KH88              	100.00%		H2QK60              	100.00%
                    	       		H2Q7R2              	8.74%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for H2QK60 as seed ortholog is 99%.

Group of orthologs #318. Best score 474 bits
Score difference with first non-orthologous sequence - C.neoformans:388 P.troglodytes:289

Q5KDR8              	100.00%		H2QFH5              	100.00%
Bootstrap support for Q5KDR8 as seed ortholog is 100%.
Bootstrap support for H2QFH5 as seed ortholog is 100%.

Group of orthologs #319. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 P.troglodytes:473

P0CP26              	100.00%		H2QJ92              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for H2QJ92 as seed ortholog is 100%.

Group of orthologs #320. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.troglodytes:231

P0CQ92              	100.00%		H2QKJ5              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for H2QKJ5 as seed ortholog is 100%.

Group of orthologs #321. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:419 P.troglodytes:473

Q5KMP0              	100.00%		H2QE69              	100.00%
Bootstrap support for Q5KMP0 as seed ortholog is 100%.
Bootstrap support for H2QE69 as seed ortholog is 100%.

Group of orthologs #322. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:378 P.troglodytes:125

Q5K7P9              	100.00%		H2QPX5              	100.00%
                    	       		H2QPX7              	8.77%
                    	       		Q5R1W2              	7.72%
                    	       		H2QPX4              	7.37%
Bootstrap support for Q5K7P9 as seed ortholog is 100%.
Bootstrap support for H2QPX5 as seed ortholog is 99%.

Group of orthologs #323. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:472 P.troglodytes:472

Q5KL04              	100.00%		H2Q973              	100.00%
Bootstrap support for Q5KL04 as seed ortholog is 100%.
Bootstrap support for H2Q973 as seed ortholog is 100%.

Group of orthologs #324. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:472 P.troglodytes:472

Q5KHJ8              	100.00%		H2R566              	100.00%
Bootstrap support for Q5KHJ8 as seed ortholog is 100%.
Bootstrap support for H2R566 as seed ortholog is 100%.

Group of orthologs #325. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:308 P.troglodytes:274

Q5KBN2              	100.00%		H2Q8L3              	100.00%
Q5KIR5              	22.15%		
Bootstrap support for Q5KBN2 as seed ortholog is 100%.
Bootstrap support for H2Q8L3 as seed ortholog is 100%.

Group of orthologs #326. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:471

Q5K8Q2              	100.00%		H2Q2Q6              	100.00%
Bootstrap support for Q5K8Q2 as seed ortholog is 100%.
Bootstrap support for H2Q2Q6 as seed ortholog is 100%.

Group of orthologs #327. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 P.troglodytes:470

Q5KIA5              	100.00%		H2QBG8              	100.00%
Bootstrap support for Q5KIA5 as seed ortholog is 100%.
Bootstrap support for H2QBG8 as seed ortholog is 100%.

Group of orthologs #328. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 P.troglodytes:404

P0CS36              	100.00%		H2R4T3              	100.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for H2R4T3 as seed ortholog is 100%.

Group of orthologs #329. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:468 P.troglodytes:468

Q5KML3              	100.00%		H2PZW0              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for H2PZW0 as seed ortholog is 100%.

Group of orthologs #330. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.troglodytes:205

Q5KDB7              	100.00%		H2QJJ1              	100.00%
Bootstrap support for Q5KDB7 as seed ortholog is 99%.
Bootstrap support for H2QJJ1 as seed ortholog is 99%.

Group of orthologs #331. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:467 P.troglodytes:467

Q5KJ46              	100.00%		H2QY18              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for H2QY18 as seed ortholog is 100%.

Group of orthologs #332. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:467 P.troglodytes:467

Q5KJX8              	100.00%		H2QZW2              	100.00%
Bootstrap support for Q5KJX8 as seed ortholog is 100%.
Bootstrap support for H2QZW2 as seed ortholog is 100%.

Group of orthologs #333. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 P.troglodytes:466

Q5KJI8              	100.00%		G2HG51              	100.00%
                    	       		H2QRM9              	51.78%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for G2HG51 as seed ortholog is 100%.

Group of orthologs #334. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:291 P.troglodytes:385

Q5KK83              	100.00%		H2QWF8              	100.00%
Bootstrap support for Q5KK83 as seed ortholog is 100%.
Bootstrap support for H2QWF8 as seed ortholog is 100%.

Group of orthologs #335. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:464 P.troglodytes:464

Q5KER6              	100.00%		H2QHR2              	100.00%
                    	       		H2Q852              	41.84%
Bootstrap support for Q5KER6 as seed ortholog is 100%.
Bootstrap support for H2QHR2 as seed ortholog is 100%.

Group of orthologs #336. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:463 P.troglodytes:463

P0CM38              	100.00%		H2QM24              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for H2QM24 as seed ortholog is 100%.

Group of orthologs #337. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 P.troglodytes:462

Q5K8F7              	100.00%		H2QQT8              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for H2QQT8 as seed ortholog is 100%.

Group of orthologs #338. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 P.troglodytes:462

Q5KH62              	100.00%		H2QTC0              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for H2QTC0 as seed ortholog is 100%.

Group of orthologs #339. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 P.troglodytes:343

Q5KQ06              	100.00%		H2R1G1              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for H2R1G1 as seed ortholog is 100%.

Group of orthologs #340. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 P.troglodytes:459

Q5KN95              	100.00%		H2Q7J7              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for H2Q7J7 as seed ortholog is 100%.

Group of orthologs #341. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 P.troglodytes:459

Q5KF96              	100.00%		H2QRD5              	100.00%
Bootstrap support for Q5KF96 as seed ortholog is 100%.
Bootstrap support for H2QRD5 as seed ortholog is 100%.

Group of orthologs #342. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 P.troglodytes:459

Q5KMS5              	100.00%		H2QJU9              	100.00%
Bootstrap support for Q5KMS5 as seed ortholog is 100%.
Bootstrap support for H2QJU9 as seed ortholog is 100%.

Group of orthologs #343. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 P.troglodytes:90

Q5KKE3              	100.00%		H2Q8F2              	100.00%
                    	       		H2QHV0              	47.15%
                    	       		H2QDQ1              	10.67%
                    	       		H2QAS6              	9.12%
                    	       		H2R0T5              	8.70%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for H2Q8F2 as seed ortholog is 96%.

Group of orthologs #344. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 P.troglodytes:258

Q5KMF5              	100.00%		H2QNU8              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for H2QNU8 as seed ortholog is 100%.

Group of orthologs #345. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:456 P.troglodytes:400

Q5KLM1              	100.00%		H2QLP1              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 100%.
Bootstrap support for H2QLP1 as seed ortholog is 100%.

Group of orthologs #346. Best score 455 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:250

Q5K8L9              	100.00%		H2R3U6              	100.00%
Bootstrap support for Q5K8L9 as seed ortholog is 91%.
Bootstrap support for H2R3U6 as seed ortholog is 100%.

Group of orthologs #347. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:454 P.troglodytes:454

Q5KMM8              	100.00%		H2R130              	100.00%
Bootstrap support for Q5KMM8 as seed ortholog is 100%.
Bootstrap support for H2R130 as seed ortholog is 100%.

Group of orthologs #348. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.troglodytes:120

Q5KMR6              	100.00%		H2R425              	100.00%
                    	       		H2Q6B6              	61.73%
                    	       		H2QIT3              	56.53%
Bootstrap support for Q5KMR6 as seed ortholog is 99%.
Bootstrap support for H2R425 as seed ortholog is 99%.

Group of orthologs #349. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:15 P.troglodytes:453

Q5KCX7              	100.00%		H2R647              	100.00%
Bootstrap support for Q5KCX7 as seed ortholog is 63%.
Alternative seed ortholog is P0CL92 (15 bits away from this cluster)
Bootstrap support for H2R647 as seed ortholog is 100%.

Group of orthologs #350. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 P.troglodytes:452

Q5K9L0              	100.00%		H2QNN7              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for H2QNN7 as seed ortholog is 100%.

Group of orthologs #351. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 P.troglodytes:452

Q5KLR9              	100.00%		H2QZ30              	100.00%
Bootstrap support for Q5KLR9 as seed ortholog is 100%.
Bootstrap support for H2QZ30 as seed ortholog is 100%.

Group of orthologs #352. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:192

Q5KP35              	100.00%		H2Q963              	100.00%
Bootstrap support for Q5KP35 as seed ortholog is 100%.
Bootstrap support for H2Q963 as seed ortholog is 100%.

Group of orthologs #353. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:449

Q5K9A9              	100.00%		H2QWI9              	100.00%
Bootstrap support for Q5K9A9 as seed ortholog is 96%.
Bootstrap support for H2QWI9 as seed ortholog is 100%.

Group of orthologs #354. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.troglodytes:448

P0CQ34              	100.00%		H2Q1F7              	100.00%
                    	       		H2Q900              	38.84%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for H2Q1F7 as seed ortholog is 100%.

Group of orthologs #355. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.troglodytes:169

Q5KLJ0              	100.00%		H2R1L2              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for H2R1L2 as seed ortholog is 99%.

Group of orthologs #356. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 P.troglodytes:446

Q5KFB7              	100.00%		H2R407              	100.00%
                    	       		H2R8G7              	100.00%
                    	       		H2QLX2              	37.14%
Bootstrap support for Q5KFB7 as seed ortholog is 100%.
Bootstrap support for H2R407 as seed ortholog is 100%.
Bootstrap support for H2R8G7 as seed ortholog is 100%.

Group of orthologs #357. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.troglodytes:202

Q5KEJ1              	100.00%		H2Q5N0              	100.00%
                    	       		H2QSW7              	76.05%
Bootstrap support for Q5KEJ1 as seed ortholog is 100%.
Bootstrap support for H2Q5N0 as seed ortholog is 100%.

Group of orthologs #358. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 P.troglodytes:446

Q5KKK6              	100.00%		H2QIZ2              	100.00%
                    	       		H2QUZ0              	67.26%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for H2QIZ2 as seed ortholog is 100%.

Group of orthologs #359. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.troglodytes:197

Q5KE89              	100.00%		H2Q299              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 100%.
Bootstrap support for H2Q299 as seed ortholog is 100%.

Group of orthologs #360. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 P.troglodytes:446

Q5K9N8              	100.00%		H2QPC6              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for H2QPC6 as seed ortholog is 100%.

Group of orthologs #361. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.troglodytes:445

Q5KGZ3              	100.00%		H2QAJ4              	100.00%
Q5KIR4              	14.13%		
Bootstrap support for Q5KGZ3 as seed ortholog is 100%.
Bootstrap support for H2QAJ4 as seed ortholog is 100%.

Group of orthologs #362. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 P.troglodytes:444

Q5KKM6              	100.00%		H2QU53              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for H2QU53 as seed ortholog is 100%.

Group of orthologs #363. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 P.troglodytes:444

Q5KMA4              	100.00%		H2QZI6              	100.00%
Bootstrap support for Q5KMA4 as seed ortholog is 100%.
Bootstrap support for H2QZI6 as seed ortholog is 100%.

Group of orthologs #364. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:154

Q5KIV9              	100.00%		Q6A2H0              	100.00%
Q5KBZ0              	10.19%		
Bootstrap support for Q5KIV9 as seed ortholog is 99%.
Bootstrap support for Q6A2H0 as seed ortholog is 99%.

Group of orthologs #365. Best score 442 bits
Score difference with first non-orthologous sequence - C.neoformans:442 P.troglodytes:442

Q5KHN9              	100.00%		H2RFP7              	100.00%
                    	       		H2QES6              	73.03%
Bootstrap support for Q5KHN9 as seed ortholog is 100%.
Bootstrap support for H2RFP7 as seed ortholog is 100%.

Group of orthologs #366. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.troglodytes:284

P0CS42              	100.00%		H2QBV7              	100.00%
                    	       		Q5IS43              	99.27%
Bootstrap support for P0CS42 as seed ortholog is 100%.
Bootstrap support for H2QBV7 as seed ortholog is 100%.

Group of orthologs #367. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 P.troglodytes:441

P0CN84              	100.00%		H2Q0Q5              	100.00%
Bootstrap support for P0CN84 as seed ortholog is 100%.
Bootstrap support for H2Q0Q5 as seed ortholog is 100%.

Group of orthologs #368. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.troglodytes:441

Q5K8E2              	100.00%		H2Q3E5              	100.00%
Bootstrap support for Q5K8E2 as seed ortholog is 71%.
Alternative seed ortholog is Q5K917 (25 bits away from this cluster)
Bootstrap support for H2Q3E5 as seed ortholog is 100%.

Group of orthologs #369. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 P.troglodytes:440

Q5KJ97              	100.00%		H2R3L8              	100.00%
Bootstrap support for Q5KJ97 as seed ortholog is 100%.
Bootstrap support for H2R3L8 as seed ortholog is 100%.

Group of orthologs #370. Best score 439 bits
Score difference with first non-orthologous sequence - C.neoformans:382 P.troglodytes:308

P0CS48              	100.00%		G2HFK3              	100.00%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for G2HFK3 as seed ortholog is 100%.

Group of orthologs #371. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.troglodytes:268

Q5KG30              	100.00%		H2R3P3              	100.00%
                    	       		H2QV71              	34.13%
                    	       		H2R450              	22.46%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for H2R3P3 as seed ortholog is 100%.

Group of orthologs #372. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.troglodytes:438

Q5KGA8              	100.00%		H2R9X9              	100.00%
                    	       		H2R0S3              	63.40%
Bootstrap support for Q5KGA8 as seed ortholog is 100%.
Bootstrap support for H2R9X9 as seed ortholog is 100%.

Group of orthologs #373. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.troglodytes:438

P0CQ14              	100.00%		H2Q7W2              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for H2Q7W2 as seed ortholog is 100%.

Group of orthologs #374. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.troglodytes:438

Q5KPL5              	100.00%		H2R212              	100.00%
Bootstrap support for Q5KPL5 as seed ortholog is 100%.
Bootstrap support for H2R212 as seed ortholog is 100%.

Group of orthologs #375. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 P.troglodytes:94

Q5KLK8              	100.00%		H2QDA2              	100.00%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for H2QDA2 as seed ortholog is 90%.

Group of orthologs #376. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 P.troglodytes:437

Q5KDX5              	100.00%		H2QUR2              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for H2QUR2 as seed ortholog is 100%.

Group of orthologs #377. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 P.troglodytes:436

Q5KJP4              	100.00%		H2R0P2              	100.00%
Bootstrap support for Q5KJP4 as seed ortholog is 100%.
Bootstrap support for H2R0P2 as seed ortholog is 100%.

Group of orthologs #378. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 P.troglodytes:435

Q5KGV7              	100.00%		H2QBV3              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for H2QBV3 as seed ortholog is 100%.

Group of orthologs #379. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:377 P.troglodytes:312

Q5KED7              	100.00%		H2R518              	100.00%
                    	       		H2QMJ6              	14.34%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for H2R518 as seed ortholog is 100%.

Group of orthologs #380. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:434 P.troglodytes:434

Q5K8I1              	100.00%		G2HF91              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for G2HF91 as seed ortholog is 100%.

Group of orthologs #381. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:434 P.troglodytes:434

Q5K6V0              	100.00%		H2QDF5              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for H2QDF5 as seed ortholog is 100%.

Group of orthologs #382. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:299 P.troglodytes:207

Q5KEQ4              	100.00%		H2R5J1              	100.00%
                    	       		H2PZ45              	55.45%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for H2R5J1 as seed ortholog is 99%.

Group of orthologs #383. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.troglodytes:343

F5HFW5              	100.00%		H2QIH9              	100.00%
Bootstrap support for F5HFW5 as seed ortholog is 100%.
Bootstrap support for H2QIH9 as seed ortholog is 100%.

Group of orthologs #384. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:152

Q5KDT4              	100.00%		H2R4B7              	100.00%
                    	       		H2RA15              	40.84%
                    	       		H2QZ44              	28.07%
Bootstrap support for Q5KDT4 as seed ortholog is 100%.
Bootstrap support for H2R4B7 as seed ortholog is 100%.

Group of orthologs #385. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 P.troglodytes:191

Q5KHB5              	100.00%		H2QS56              	100.00%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for H2QS56 as seed ortholog is 100%.

Group of orthologs #386. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 P.troglodytes:430

P0CO20              	100.00%		H2QMM2              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for H2QMM2 as seed ortholog is 100%.

Group of orthologs #387. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 P.troglodytes:429

Q5KA00              	100.00%		H2QGB6              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for H2QGB6 as seed ortholog is 100%.

Group of orthologs #388. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 P.troglodytes:127

Q5KCX1              	100.00%		H2QZE1              	100.00%
Bootstrap support for Q5KCX1 as seed ortholog is 100%.
Bootstrap support for H2QZE1 as seed ortholog is 99%.

Group of orthologs #389. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.troglodytes:428

P0CN44              	100.00%		H2QU35              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for H2QU35 as seed ortholog is 100%.

Group of orthologs #390. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.troglodytes:428

Q5KH01              	100.00%		H2QTJ4              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for H2QTJ4 as seed ortholog is 100%.

Group of orthologs #391. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 P.troglodytes:86

Q5KDK0              	100.00%		H2QML3              	100.00%
                    	       		H2Q6D4              	43.22%
Bootstrap support for Q5KDK0 as seed ortholog is 100%.
Bootstrap support for H2QML3 as seed ortholog is 98%.

Group of orthologs #392. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 P.troglodytes:426

Q5KH27              	100.00%		H2R1L6              	100.00%
                    	       		H2QBY9              	34.07%
Bootstrap support for Q5KH27 as seed ortholog is 100%.
Bootstrap support for H2R1L6 as seed ortholog is 100%.

Group of orthologs #393. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 P.troglodytes:426

P0CN42              	100.00%		H2Q2N4              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for H2Q2N4 as seed ortholog is 100%.

Group of orthologs #394. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 P.troglodytes:426

Q5KNR0              	100.00%		H2QHX3              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for H2QHX3 as seed ortholog is 100%.

Group of orthologs #395. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 P.troglodytes:425

Q5KDR1              	100.00%		H2Q457              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for H2Q457 as seed ortholog is 100%.

Group of orthologs #396. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 P.troglodytes:139

Q5KJV0              	100.00%		H2Q4P9              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 100%.
Bootstrap support for H2Q4P9 as seed ortholog is 99%.

Group of orthologs #397. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 P.troglodytes:425

Q5KIS9              	100.00%		H2Q9E2              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for H2Q9E2 as seed ortholog is 100%.

Group of orthologs #398. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 P.troglodytes:425

Q5KAU7              	100.00%		H2R965              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for H2R965 as seed ortholog is 100%.

Group of orthologs #399. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 P.troglodytes:342

Q5KB45              	100.00%		H2QMP6              	100.00%
                    	       		H2QV90              	48.25%
                    	       		H2Q2R7              	20.26%
                    	       		H2QVX1              	19.17%
                    	       		H2QRZ4              	19.06%
Bootstrap support for Q5KB45 as seed ortholog is 100%.
Bootstrap support for H2QMP6 as seed ortholog is 100%.

Group of orthologs #400. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:81

Q5KHP3              	100.00%		Q7YQL4              	100.00%
Q5KFY6              	100.00%		H2QP14              	100.00%
                    	       		H2Q4G3              	44.70%
Bootstrap support for Q5KHP3 as seed ortholog is 100%.
Bootstrap support for Q5KFY6 as seed ortholog is 100%.
Bootstrap support for Q7YQL4 as seed ortholog is 99%.
Bootstrap support for H2QP14 as seed ortholog is 97%.

Group of orthologs #401. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 P.troglodytes:315

Q5KBU1              	100.00%		H2R155              	100.00%
                    	       		H2QUY9              	66.89%
Bootstrap support for Q5KBU1 as seed ortholog is 100%.
Bootstrap support for H2R155 as seed ortholog is 100%.

Group of orthologs #402. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:422

Q5KJN4              	100.00%		H2RAE4              	100.00%
Bootstrap support for Q5KJN4 as seed ortholog is 100%.
Bootstrap support for H2RAE4 as seed ortholog is 100%.

Group of orthologs #403. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.troglodytes:421

Q5KJH8              	100.00%		H2RAJ6              	100.00%
                    	       		H2QTY6              	26.40%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for H2RAJ6 as seed ortholog is 100%.

Group of orthologs #404. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 P.troglodytes:421

P0CR56              	100.00%		H2Q8Q1              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for H2Q8Q1 as seed ortholog is 100%.

Group of orthologs #405. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:333 P.troglodytes:421

Q5KDT3              	100.00%		H2Q6M7              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for H2Q6M7 as seed ortholog is 100%.

Group of orthologs #406. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 P.troglodytes:418

Q5KAH4              	100.00%		H2QNI7              	100.00%
                    	       		H2Q7J2              	65.82%
                    	       		H2QZ12              	61.96%
Bootstrap support for Q5KAH4 as seed ortholog is 100%.
Bootstrap support for H2QNI7 as seed ortholog is 100%.

Group of orthologs #407. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 P.troglodytes:418

Q5K7P2              	100.00%		H2Q956              	100.00%
Bootstrap support for Q5K7P2 as seed ortholog is 100%.
Bootstrap support for H2Q956 as seed ortholog is 100%.

Group of orthologs #408. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 P.troglodytes:418

P0CS46              	100.00%		H2QIP3              	100.00%
Bootstrap support for P0CS46 as seed ortholog is 100%.
Bootstrap support for H2QIP3 as seed ortholog is 100%.

Group of orthologs #409. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 P.troglodytes:416

Q5KHA6              	100.00%		H2Q4K5              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for H2Q4K5 as seed ortholog is 100%.

Group of orthologs #410. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.troglodytes:413

Q5KAB5              	100.00%		H2R0M7              	100.00%
                    	       		H2Q2F5              	23.83%
Bootstrap support for Q5KAB5 as seed ortholog is 100%.
Bootstrap support for H2R0M7 as seed ortholog is 100%.

Group of orthologs #411. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.troglodytes:413

P0CO78              	100.00%		H2R9L5              	100.00%
                    	       		H2QA78              	31.01%
Bootstrap support for P0CO78 as seed ortholog is 100%.
Bootstrap support for H2R9L5 as seed ortholog is 100%.

Group of orthologs #412. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.troglodytes:173

Q5KP10              	100.00%		H2Q9W0              	100.00%
Bootstrap support for Q5KP10 as seed ortholog is 100%.
Bootstrap support for H2Q9W0 as seed ortholog is 100%.

Group of orthologs #413. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.troglodytes:174

Q5KP01              	100.00%		H2QMA8              	100.00%
Bootstrap support for Q5KP01 as seed ortholog is 100%.
Bootstrap support for H2QMA8 as seed ortholog is 99%.

Group of orthologs #414. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 P.troglodytes:233

P0CR06              	100.00%		H2Q6X5              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 100%.
Bootstrap support for H2Q6X5 as seed ortholog is 99%.

Group of orthologs #415. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 P.troglodytes:412

Q5KJY4              	100.00%		G2HGE5              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for G2HGE5 as seed ortholog is 100%.

Group of orthologs #416. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:411 P.troglodytes:411

P0CN56              	100.00%		A5A6M4              	100.00%
Bootstrap support for P0CN56 as seed ortholog is 100%.
Bootstrap support for A5A6M4 as seed ortholog is 100%.

Group of orthologs #417. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:411 P.troglodytes:411

P0CS60              	100.00%		H2Q3U7              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for H2Q3U7 as seed ortholog is 100%.

Group of orthologs #418. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:411 P.troglodytes:411

Q5KK29              	100.00%		H2Q7Z6              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for H2Q7Z6 as seed ortholog is 100%.

Group of orthologs #419. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:156

Q5KLT3              	100.00%		H2QPX3              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 100%.
Bootstrap support for H2QPX3 as seed ortholog is 99%.

Group of orthologs #420. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 P.troglodytes:408

Q5KF32              	100.00%		H2QCD9              	100.00%
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for H2QCD9 as seed ortholog is 100%.

Group of orthologs #421. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.troglodytes:237

P0CR10              	100.00%		H2QUI5              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 100%.
Bootstrap support for H2QUI5 as seed ortholog is 100%.

Group of orthologs #422. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:408

Q5KHS2              	100.00%		H2R2K5              	100.00%
Bootstrap support for Q5KHS2 as seed ortholog is 99%.
Bootstrap support for H2R2K5 as seed ortholog is 100%.

Group of orthologs #423. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:407

Q5KBB6              	100.00%		H2QT13              	100.00%
Bootstrap support for Q5KBB6 as seed ortholog is 99%.
Bootstrap support for H2QT13 as seed ortholog is 100%.

Group of orthologs #424. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 P.troglodytes:407

P0CR70              	100.00%		H2R1F9              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for H2R1F9 as seed ortholog is 100%.

Group of orthologs #425. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.troglodytes:406

P0CN48              	100.00%		G2HHB2              	100.00%
Bootstrap support for P0CN48 as seed ortholog is 100%.
Bootstrap support for G2HHB2 as seed ortholog is 100%.

Group of orthologs #426. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.troglodytes:185

Q5KLS2              	100.00%		H2QMR0              	100.00%
Bootstrap support for Q5KLS2 as seed ortholog is 100%.
Bootstrap support for H2QMR0 as seed ortholog is 100%.

Group of orthologs #427. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 P.troglodytes:404

Q5KH75              	100.00%		H2RBY6              	100.00%
                    	       		H2R2D4              	11.24%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for H2RBY6 as seed ortholog is 100%.

Group of orthologs #428. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 P.troglodytes:404

Q5KPN7              	100.00%		H2QIW0              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for H2QIW0 as seed ortholog is 100%.

Group of orthologs #429. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.troglodytes:403

Q5KDV3              	100.00%		H2QQU5              	100.00%
Q5KJX0              	74.41%		H2PZT1              	40.68%
Bootstrap support for Q5KDV3 as seed ortholog is 100%.
Bootstrap support for H2QQU5 as seed ortholog is 100%.

Group of orthologs #430. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.troglodytes:16

Q5KKV1              	100.00%		H2QDX1              	100.00%
                    	       		H2Q670              	30.23%
Bootstrap support for Q5KKV1 as seed ortholog is 100%.
Bootstrap support for H2QDX1 as seed ortholog is 70%.
Alternative seed ortholog is H2R7P8 (16 bits away from this cluster)

Group of orthologs #431. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:149

Q5KDX8              	100.00%		H2QYZ4              	100.00%
                    	       		H2QYA6              	57.96%
Bootstrap support for Q5KDX8 as seed ortholog is 98%.
Bootstrap support for H2QYZ4 as seed ortholog is 100%.

Group of orthologs #432. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.troglodytes:403

P0CS38              	100.00%		H2QL84              	100.00%
Bootstrap support for P0CS38 as seed ortholog is 100%.
Bootstrap support for H2QL84 as seed ortholog is 100%.

Group of orthologs #433. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 P.troglodytes:402

Q5K7L9              	100.00%		H2Q0R0              	100.00%
Bootstrap support for Q5K7L9 as seed ortholog is 100%.
Bootstrap support for H2Q0R0 as seed ortholog is 100%.

Group of orthologs #434. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 P.troglodytes:402

P0CN28              	100.00%		H2QF35              	100.00%
Bootstrap support for P0CN28 as seed ortholog is 100%.
Bootstrap support for H2QF35 as seed ortholog is 100%.

Group of orthologs #435. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 P.troglodytes:402

Q5KKS5              	100.00%		H2R294              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for H2R294 as seed ortholog is 100%.

Group of orthologs #436. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:401 P.troglodytes:147

Q5KNW6              	100.00%		H2QEI6              	100.00%
Bootstrap support for Q5KNW6 as seed ortholog is 100%.
Bootstrap support for H2QEI6 as seed ortholog is 99%.

Group of orthologs #437. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.troglodytes:69

Q5KFU8              	100.00%		Q5R1W1              	100.00%
Bootstrap support for Q5KFU8 as seed ortholog is 99%.
Bootstrap support for Q5R1W1 as seed ortholog is 98%.

Group of orthologs #438. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 P.troglodytes:400

Q5KGR5              	100.00%		A5A6H9              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 100%.
Bootstrap support for A5A6H9 as seed ortholog is 100%.

Group of orthologs #439. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.troglodytes:75

Q5KLZ4              	100.00%		H2Q581              	100.00%
Bootstrap support for Q5KLZ4 as seed ortholog is 100%.
Bootstrap support for H2Q581 as seed ortholog is 99%.

Group of orthologs #440. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 P.troglodytes:400

Q5KM38              	100.00%		H2QP47              	100.00%
Bootstrap support for Q5KM38 as seed ortholog is 100%.
Bootstrap support for H2QP47 as seed ortholog is 100%.

Group of orthologs #441. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 P.troglodytes:281

Q5KKX9              	100.00%		H2R7V1              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 100%.
Bootstrap support for H2R7V1 as seed ortholog is 100%.

Group of orthologs #442. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 P.troglodytes:399

Q5KFH8              	100.00%		Q3YA36              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for Q3YA36 as seed ortholog is 100%.

Group of orthologs #443. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:397 P.troglodytes:397

Q5K7X0              	100.00%		H2Q241              	100.00%
Bootstrap support for Q5K7X0 as seed ortholog is 100%.
Bootstrap support for H2Q241 as seed ortholog is 100%.

Group of orthologs #444. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:397 P.troglodytes:397

Q5KLQ5              	100.00%		H2Q7E8              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for H2Q7E8 as seed ortholog is 100%.

Group of orthologs #445. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.troglodytes:396

Q5KB65              	100.00%		H2Q113              	100.00%
                    	       		H2Q1L1              	47.60%
                    	       		H2QMJ4              	40.54%
Bootstrap support for Q5KB65 as seed ortholog is 99%.
Bootstrap support for H2Q113 as seed ortholog is 100%.

Group of orthologs #446. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 P.troglodytes:396

Q5KIJ9              	100.00%		H2QBU7              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for H2QBU7 as seed ortholog is 100%.

Group of orthologs #447. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.troglodytes:70

Q5KIM3              	100.00%		H2Q4S0              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for H2Q4S0 as seed ortholog is 94%.

Group of orthologs #448. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:395 P.troglodytes:172

Q5KIY3              	100.00%		H2QUS7              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for H2QUS7 as seed ortholog is 99%.

Group of orthologs #449. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.troglodytes:131

P0CO88              	100.00%		H2QAK2              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 100%.
Bootstrap support for H2QAK2 as seed ortholog is 99%.

Group of orthologs #450. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 P.troglodytes:394

Q5KLF5              	100.00%		H2QHF7              	100.00%
Bootstrap support for Q5KLF5 as seed ortholog is 100%.
Bootstrap support for H2QHF7 as seed ortholog is 100%.

Group of orthologs #451. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 P.troglodytes:394

Q5KPS9              	100.00%		H2QIF3              	100.00%
Bootstrap support for Q5KPS9 as seed ortholog is 100%.
Bootstrap support for H2QIF3 as seed ortholog is 100%.

Group of orthologs #452. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 P.troglodytes:394

Q5K7Q2              	100.00%		H2R2Z8              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for H2R2Z8 as seed ortholog is 100%.

Group of orthologs #453. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.troglodytes:316

Q5KMG8              	100.00%		H2QJS0              	100.00%
Q5K9L7              	36.29%		
Bootstrap support for Q5KMG8 as seed ortholog is 100%.
Bootstrap support for H2QJS0 as seed ortholog is 100%.

Group of orthologs #454. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.troglodytes:393

P0CR72              	100.00%		H2QCI6              	100.00%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for H2QCI6 as seed ortholog is 100%.

Group of orthologs #455. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.troglodytes:174

Q5KCX8              	100.00%		H2QX77              	100.00%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for H2QX77 as seed ortholog is 99%.

Group of orthologs #456. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.troglodytes:393

Q5KKG9              	100.00%		H2R4V9              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for H2R4V9 as seed ortholog is 100%.

Group of orthologs #457. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:391

Q5KE74              	100.00%		H2QB17              	100.00%
                    	       		H2QZJ9              	42.35%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for H2QB17 as seed ortholog is 100%.

Group of orthologs #458. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 P.troglodytes:391

Q5KP39              	100.00%		H2QBB6              	100.00%
                    	       		H2QWD7              	18.16%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for H2QBB6 as seed ortholog is 100%.

Group of orthologs #459. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 P.troglodytes:13

Q5KID8              	100.00%		H2Q7R6              	100.00%
Bootstrap support for Q5KID8 as seed ortholog is 100%.
Bootstrap support for H2Q7R6 as seed ortholog is 60%.
Alternative seed ortholog is H2R1N2 (13 bits away from this cluster)

Group of orthologs #460. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 P.troglodytes:298

Q5KL44              	100.00%		H2Q7T6              	100.00%
Bootstrap support for Q5KL44 as seed ortholog is 100%.
Bootstrap support for H2Q7T6 as seed ortholog is 100%.

Group of orthologs #461. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 P.troglodytes:389

Q5KAS4              	100.00%		H2PZ49              	100.00%
Bootstrap support for Q5KAS4 as seed ortholog is 100%.
Bootstrap support for H2PZ49 as seed ortholog is 100%.

Group of orthologs #462. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.troglodytes:389

P0CN18              	100.00%		H2QBU9              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 100%.
Bootstrap support for H2QBU9 as seed ortholog is 100%.

Group of orthologs #463. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 P.troglodytes:115

Q5KBD0              	100.00%		H2Q9R3              	100.00%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for H2Q9R3 as seed ortholog is 99%.

Group of orthologs #464. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 P.troglodytes:389

Q5KH85              	100.00%		H2QEV8              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for H2QEV8 as seed ortholog is 100%.

Group of orthologs #465. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.troglodytes:264

Q5KHR9              	100.00%		H2QXQ4              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 100%.
Bootstrap support for H2QXQ4 as seed ortholog is 100%.

Group of orthologs #466. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 P.troglodytes:388

Q5KE15              	100.00%		H2QI84              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for H2QI84 as seed ortholog is 100%.

Group of orthologs #467. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.troglodytes:196

Q5KJQ2              	100.00%		H2R7N8              	100.00%
Bootstrap support for Q5KJQ2 as seed ortholog is 100%.
Bootstrap support for H2R7N8 as seed ortholog is 100%.

Group of orthologs #468. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:227

Q5KJE3              	100.00%		H2QGM7              	100.00%
Bootstrap support for Q5KJE3 as seed ortholog is 100%.
Bootstrap support for H2QGM7 as seed ortholog is 100%.

Group of orthologs #469. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 P.troglodytes:387

Q5KB64              	100.00%		H2QZJ2              	100.00%
Bootstrap support for Q5KB64 as seed ortholog is 100%.
Bootstrap support for H2QZJ2 as seed ortholog is 100%.

Group of orthologs #470. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 P.troglodytes:79

Q5K8Z6              	100.00%		G2HI54              	100.00%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for G2HI54 as seed ortholog is 99%.

Group of orthologs #471. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 P.troglodytes:330

Q5KKZ9              	100.00%		H2QI99              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for H2QI99 as seed ortholog is 100%.

Group of orthologs #472. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 P.troglodytes:386

Q5KP99              	100.00%		H2QXQ8              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for H2QXQ8 as seed ortholog is 100%.

Group of orthologs #473. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:385 P.troglodytes:385

P0CO58              	100.00%		H2QPC8              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for H2QPC8 as seed ortholog is 100%.

Group of orthologs #474. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.troglodytes:211

Q5KLR7              	100.00%		H2QB18              	100.00%
                    	       		G2HHH7              	13.68%
                    	       		H2Q9W2              	8.12%
Bootstrap support for Q5KLR7 as seed ortholog is 99%.
Bootstrap support for H2QB18 as seed ortholog is 100%.

Group of orthologs #475. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.troglodytes:45

Q5KNT3              	100.00%		H2RAT8              	100.00%
                    	       		H2Q9K7              	52.06%
                    	       		H2QEV4              	15.56%
Bootstrap support for Q5KNT3 as seed ortholog is 99%.
Bootstrap support for H2RAT8 as seed ortholog is 87%.

Group of orthologs #476. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.troglodytes:250

Q5K9B8              	100.00%		G2HFG8              	100.00%
                    	       		H2QQY0              	7.68%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for G2HFG8 as seed ortholog is 100%.

Group of orthologs #477. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 P.troglodytes:384

P0CR16              	100.00%		H2Q6Y4              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 100%.
Bootstrap support for H2Q6Y4 as seed ortholog is 100%.

Group of orthologs #478. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:303 P.troglodytes:384

Q5KCC8              	100.00%		H2Q220              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for H2Q220 as seed ortholog is 100%.

Group of orthologs #479. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:251 P.troglodytes:213

P0CQ86              	100.00%		H2QBG0              	100.00%
                    	       		H2QBG1              	100.00%
                    	       		G2HIP9              	42.75%
Bootstrap support for P0CQ86 as seed ortholog is 100%.
Bootstrap support for H2QBG0 as seed ortholog is 100%.
Bootstrap support for H2QBG1 as seed ortholog is 100%.

Group of orthologs #480. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 P.troglodytes:139

Q5KEJ4              	100.00%		H2QDX0              	100.00%
                    	       		H2QMV1              	16.88%
Bootstrap support for Q5KEJ4 as seed ortholog is 100%.
Bootstrap support for H2QDX0 as seed ortholog is 99%.

Group of orthologs #481. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.troglodytes:381

Q5KGD3              	100.00%		H2QMI4              	100.00%
                    	       		H2Q680              	47.99%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for H2QMI4 as seed ortholog is 100%.

Group of orthologs #482. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 P.troglodytes:36

Q5KFJ4              	100.00%		H2QAL3              	100.00%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for H2QAL3 as seed ortholog is 86%.

Group of orthologs #483. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 P.troglodytes:380

P0CP90              	100.00%		H2QLB3              	100.00%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for H2QLB3 as seed ortholog is 100%.

Group of orthologs #484. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 P.troglodytes:380

Q5KIN5              	100.00%		H2QYB7              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for H2QYB7 as seed ortholog is 100%.

Group of orthologs #485. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.troglodytes:147

Q5KHE5              	100.00%		H2QLB4              	100.00%
P0CP66              	25.93%		H2RA86              	61.77%
Bootstrap support for Q5KHE5 as seed ortholog is 94%.
Bootstrap support for H2QLB4 as seed ortholog is 99%.

Group of orthologs #486. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 P.troglodytes:297

Q5KMH4              	100.00%		H2QAS4              	100.00%
                    	       		H2QDP0              	29.10%
Bootstrap support for Q5KMH4 as seed ortholog is 100%.
Bootstrap support for H2QAS4 as seed ortholog is 100%.

Group of orthologs #487. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 P.troglodytes:379

Q5KCI3              	100.00%		H2R3M8              	100.00%
                    	       		H2R439              	5.57%
Bootstrap support for Q5KCI3 as seed ortholog is 100%.
Bootstrap support for H2R3M8 as seed ortholog is 100%.

Group of orthologs #488. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 P.troglodytes:378

Q5KNK2              	100.00%		H2QYT0              	100.00%
                    	       		H2RB54              	93.08%
                    	       		Q6GVM7              	82.39%
                    	       		Q861U9              	79.87%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for H2QYT0 as seed ortholog is 100%.

Group of orthologs #489. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 P.troglodytes:263

Q5KG46              	100.00%		H2Q766              	100.00%
Bootstrap support for Q5KG46 as seed ortholog is 100%.
Bootstrap support for H2Q766 as seed ortholog is 100%.

Group of orthologs #490. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 P.troglodytes:377

Q5KA97              	100.00%		H2QFG3              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for H2QFG3 as seed ortholog is 100%.

Group of orthologs #491. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.troglodytes:376

P0CS12              	100.00%		G2HEY4              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for G2HEY4 as seed ortholog is 100%.

Group of orthologs #492. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.troglodytes:376

Q5KLS1              	100.00%		G2HE55              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for G2HE55 as seed ortholog is 100%.

Group of orthologs #493. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.troglodytes:376

Q5KK64              	100.00%		H2R1H7              	100.00%
Bootstrap support for Q5KK64 as seed ortholog is 100%.
Bootstrap support for H2R1H7 as seed ortholog is 100%.

Group of orthologs #494. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:375

Q5KFJ6              	100.00%		H2Q0H7              	100.00%
                    	       		H2R601              	29.81%
Bootstrap support for Q5KFJ6 as seed ortholog is 100%.
Bootstrap support for H2Q0H7 as seed ortholog is 100%.

Group of orthologs #495. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:96

Q5K8W1              	100.00%		H2PXZ4              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for H2PXZ4 as seed ortholog is 94%.

Group of orthologs #496. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:125

Q5KGZ9              	100.00%		H2Q742              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for H2Q742 as seed ortholog is 99%.

Group of orthologs #497. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.troglodytes:375

P0CP50              	100.00%		H2RA81              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for H2RA81 as seed ortholog is 100%.

Group of orthologs #498. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.troglodytes:374

P0CP20              	100.00%		H2QD84              	100.00%
                    	       		H2RC22              	100.00%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for H2QD84 as seed ortholog is 100%.
Bootstrap support for H2RC22 as seed ortholog is 100%.

Group of orthologs #499. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.troglodytes:321

Q5KHT1              	100.00%		H2Q557              	100.00%
                    	       		H2Q203              	31.00%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for H2Q557 as seed ortholog is 100%.

Group of orthologs #500. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.troglodytes:53

P0CP02              	100.00%		H2Q441              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for H2Q441 as seed ortholog is 88%.

Group of orthologs #501. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.troglodytes:374

Q5KFV6              	100.00%		H2Q847              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for H2Q847 as seed ortholog is 100%.

Group of orthologs #502. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.troglodytes:28

Q5KP84              	100.00%		H2R1G3              	100.00%
                    	       		H2QFK0              	60.67%
                    	       		H2QXB9              	44.94%
Bootstrap support for Q5KP84 as seed ortholog is 76%.
Bootstrap support for H2R1G3 as seed ortholog is 84%.

Group of orthologs #503. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 P.troglodytes:170

Q5KLS5              	100.00%		H2QNV1              	100.00%
                    	       		H2R1S0              	42.82%
                    	       		H2PXV3              	9.95%
                    	       		H2QNM2              	7.57%
                    	       		H2R604              	6.38%
                    	       		H2QYE4              	5.68%
Bootstrap support for Q5KLS5 as seed ortholog is 100%.
Bootstrap support for H2QNV1 as seed ortholog is 99%.

Group of orthologs #504. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 P.troglodytes:372

Q5K758              	100.00%		H2QTC2              	100.00%
                    	       		H2Q4I4              	62.05%
Bootstrap support for Q5K758 as seed ortholog is 100%.
Bootstrap support for H2QTC2 as seed ortholog is 100%.

Group of orthologs #505. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 P.troglodytes:257

P0CP22              	100.00%		H2QPR6              	100.00%
                    	       		H2QS65              	68.41%
Bootstrap support for P0CP22 as seed ortholog is 100%.
Bootstrap support for H2QPR6 as seed ortholog is 100%.

Group of orthologs #506. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:107

P0CP68              	100.00%		Q95NE7              	100.00%
                    	       		Q9N272              	17.53%
Bootstrap support for P0CP68 as seed ortholog is 97%.
Bootstrap support for Q95NE7 as seed ortholog is 99%.

Group of orthologs #507. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 P.troglodytes:371

P0CQ60              	100.00%		G2HHG5              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for G2HHG5 as seed ortholog is 100%.

Group of orthologs #508. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 P.troglodytes:371

Q5KHZ2              	100.00%		H2QHN7              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for H2QHN7 as seed ortholog is 100%.

Group of orthologs #509. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 P.troglodytes:320

Q5K8Z3              	100.00%		H2QWY1              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for H2QWY1 as seed ortholog is 100%.

Group of orthologs #510. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:232

Q5KJI7              	100.00%		H2Q9Z2              	100.00%
                    	       		H2QR49              	51.21%
Bootstrap support for Q5KJI7 as seed ortholog is 98%.
Bootstrap support for H2Q9Z2 as seed ortholog is 99%.

Group of orthologs #511. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:370 P.troglodytes:370

Q5KPZ5              	100.00%		H2R708              	100.00%
Bootstrap support for Q5KPZ5 as seed ortholog is 100%.
Bootstrap support for H2R708 as seed ortholog is 100%.

Group of orthologs #512. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.troglodytes:369

Q5K8K4              	100.00%		H2QX34              	100.00%
Bootstrap support for Q5K8K4 as seed ortholog is 100%.
Bootstrap support for H2QX34 as seed ortholog is 100%.

Group of orthologs #513. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.troglodytes:308

Q5KJ58              	100.00%		H2QQS6              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for H2QQS6 as seed ortholog is 100%.

Group of orthologs #514. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.troglodytes:368

Q5KGF8              	100.00%		H2R0H6              	100.00%
                    	       		H2QRA2              	47.19%
Bootstrap support for Q5KGF8 as seed ortholog is 100%.
Bootstrap support for H2R0H6 as seed ortholog is 100%.

Group of orthologs #515. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 P.troglodytes:367

Q5KNU1              	100.00%		H2Q8W4              	100.00%
                    	       		H2QHY1              	43.32%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for H2Q8W4 as seed ortholog is 100%.

Group of orthologs #516. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:271 P.troglodytes:367

Q5K952              	100.00%		H2Q2V7              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for H2Q2V7 as seed ortholog is 100%.

Group of orthologs #517. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 P.troglodytes:367

Q5KI73              	100.00%		H2R8Y9              	100.00%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for H2R8Y9 as seed ortholog is 100%.

Group of orthologs #518. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.troglodytes:366

Q5KES4              	100.00%		A5A6L0              	100.00%
                    	       		H2QPX0              	72.90%
Bootstrap support for Q5KES4 as seed ortholog is 100%.
Bootstrap support for A5A6L0 as seed ortholog is 100%.

Group of orthologs #519. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.troglodytes:267

Q5KJ20              	100.00%		H2QUK8              	100.00%
                    	       		H2Q9E8              	27.45%
Bootstrap support for Q5KJ20 as seed ortholog is 100%.
Bootstrap support for H2QUK8 as seed ortholog is 100%.

Group of orthologs #520. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.troglodytes:366

Q5KAS7              	100.00%		H2QK92              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for H2QK92 as seed ortholog is 100%.

Group of orthologs #521. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.troglodytes:191

Q5KD79              	100.00%		H2QV72              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for H2QV72 as seed ortholog is 99%.

Group of orthologs #522. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 P.troglodytes:365

Q5KBY0              	100.00%		H2Q4A6              	100.00%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for H2Q4A6 as seed ortholog is 100%.

Group of orthologs #523. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 P.troglodytes:365

Q5KHI3              	100.00%		H2R1T4              	100.00%
Bootstrap support for Q5KHI3 as seed ortholog is 100%.
Bootstrap support for H2R1T4 as seed ortholog is 100%.

Group of orthologs #524. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.troglodytes:364

Q5KCX4              	100.00%		H2QTB9              	100.00%
                    	       		H2QL00              	24.07%
Bootstrap support for Q5KCX4 as seed ortholog is 100%.
Bootstrap support for H2QTB9 as seed ortholog is 100%.

Group of orthologs #525. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.troglodytes:364

Q5KJI4              	100.00%		H2QFT4              	100.00%
Bootstrap support for Q5KJI4 as seed ortholog is 100%.
Bootstrap support for H2QFT4 as seed ortholog is 100%.

Group of orthologs #526. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.troglodytes:297

Q5KAX6              	100.00%		H2QQY8              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for H2QQY8 as seed ortholog is 100%.

Group of orthologs #527. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 P.troglodytes:363

P0CP58              	100.00%		G2HFP5              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for G2HFP5 as seed ortholog is 100%.

Group of orthologs #528. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:362

Q5KLL2              	100.00%		H2QHH7              	100.00%
                    	       		H2PYI5              	70.83%
Bootstrap support for Q5KLL2 as seed ortholog is 99%.
Bootstrap support for H2QHH7 as seed ortholog is 100%.

Group of orthologs #529. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 P.troglodytes:360

Q5KEY3              	100.00%		H2QEJ4              	100.00%
Q5KBK5              	13.75%		
Bootstrap support for Q5KEY3 as seed ortholog is 100%.
Bootstrap support for H2QEJ4 as seed ortholog is 100%.

Group of orthologs #530. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 P.troglodytes:360

Q5KH76              	100.00%		H2QMZ9              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for H2QMZ9 as seed ortholog is 100%.

Group of orthologs #531. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.troglodytes:359

Q5KMY7              	100.00%		H2PYW8              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for H2PYW8 as seed ortholog is 100%.

Group of orthologs #532. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.troglodytes:260

P0CP88              	100.00%		H2QTW3              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for H2QTW3 as seed ortholog is 100%.

Group of orthologs #533. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 P.troglodytes:358

P0CO14              	100.00%		H2Q1E3              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for H2Q1E3 as seed ortholog is 100%.

Group of orthologs #534. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 P.troglodytes:358

Q5KPW6              	100.00%		H2PYL0              	100.00%
Bootstrap support for Q5KPW6 as seed ortholog is 100%.
Bootstrap support for H2PYL0 as seed ortholog is 100%.

Group of orthologs #535. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 P.troglodytes:358

Q5KBP8              	100.00%		H2QHR5              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for H2QHR5 as seed ortholog is 100%.

Group of orthologs #536. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.troglodytes:287

Q5KDL9              	100.00%		H2QUS9              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 91%.
Bootstrap support for H2QUS9 as seed ortholog is 100%.

Group of orthologs #537. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.troglodytes:358

Q5KEY0              	100.00%		H2R0F5              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for H2R0F5 as seed ortholog is 100%.

Group of orthologs #538. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:26 P.troglodytes:65

Q5KPS8              	100.00%		H2QMN4              	100.00%
                    	       		H2QUU5              	76.67%
                    	       		H2PZK9              	75.00%
                    	       		H2RBI6              	43.89%
                    	       		H2PZL0              	42.78%
                    	       		H2QB45              	40.56%
                    	       		H2QMN3              	36.11%
                    	       		H2QLC1              	34.72%
Bootstrap support for Q5KPS8 as seed ortholog is 79%.
Bootstrap support for H2QMN4 as seed ortholog is 97%.

Group of orthologs #539. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 P.troglodytes:218

Q5KAU3              	100.00%		H2QWS0              	100.00%
Q5KAT1              	100.00%		H2PYM8              	100.00%
                    	       		H2PYM7              	81.41%
                    	       		H2R2M1              	76.51%
Bootstrap support for Q5KAU3 as seed ortholog is 100%.
Bootstrap support for Q5KAT1 as seed ortholog is 100%.
Bootstrap support for H2QWS0 as seed ortholog is 99%.
Bootstrap support for H2PYM8 as seed ortholog is 99%.

Group of orthologs #540. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 P.troglodytes:253

Q5K9S7              	100.00%		H2QSX7              	100.00%
                    	       		H2QLX0              	41.90%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for H2QSX7 as seed ortholog is 100%.

Group of orthologs #541. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 P.troglodytes:312

Q5KJJ1              	100.00%		H2QP80              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for H2QP80 as seed ortholog is 100%.

Group of orthologs #542. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 P.troglodytes:356

Q5KP83              	100.00%		H2QTB5              	100.00%
Bootstrap support for Q5KP83 as seed ortholog is 100%.
Bootstrap support for H2QTB5 as seed ortholog is 100%.

Group of orthologs #543. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 P.troglodytes:256

Q5K7N9              	100.00%		H2QLN6              	100.00%
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for H2QLN6 as seed ortholog is 100%.

Group of orthologs #544. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 P.troglodytes:354

Q5KQ04              	100.00%		H2QQV5              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for H2QQV5 as seed ortholog is 100%.

Group of orthologs #545. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 P.troglodytes:354

Q5KM29              	100.00%		H2QUG9              	100.00%
Bootstrap support for Q5KM29 as seed ortholog is 100%.
Bootstrap support for H2QUG9 as seed ortholog is 100%.

Group of orthologs #546. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.troglodytes:353

Q5KHU9              	100.00%		H2QE76              	100.00%
                    	       		H2QHG2              	34.76%
                    	       		H2QKD2              	30.20%
Bootstrap support for Q5KHU9 as seed ortholog is 100%.
Bootstrap support for H2QE76 as seed ortholog is 100%.

Group of orthologs #547. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.troglodytes:353

Q5K796              	100.00%		H2Q6Z3              	100.00%
Bootstrap support for Q5K796 as seed ortholog is 100%.
Bootstrap support for H2Q6Z3 as seed ortholog is 100%.

Group of orthologs #548. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.troglodytes:353

Q5KAF2              	100.00%		H2Q9N4              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for H2Q9N4 as seed ortholog is 100%.

Group of orthologs #549. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.troglodytes:136

Q5KCX9              	100.00%		H2QGK4              	100.00%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for H2QGK4 as seed ortholog is 99%.

Group of orthologs #550. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:271 P.troglodytes:198

Q5KMP3              	100.00%		H2Q8M1              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for H2Q8M1 as seed ortholog is 99%.

Group of orthologs #551. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.troglodytes:353

Q5KFR0              	100.00%		H2R168              	100.00%
Bootstrap support for Q5KFR0 as seed ortholog is 100%.
Bootstrap support for H2R168 as seed ortholog is 100%.

Group of orthologs #552. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.troglodytes:352

P0CO32              	100.00%		H2RCS7              	100.00%
Bootstrap support for P0CO32 as seed ortholog is 100%.
Bootstrap support for H2RCS7 as seed ortholog is 100%.

Group of orthologs #553. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.troglodytes:352

Q5KEZ5              	100.00%		H2R3H4              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for H2R3H4 as seed ortholog is 100%.

Group of orthologs #554. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:39 P.troglodytes:352

Q5KIZ1              	100.00%		H2R2U5              	100.00%
Bootstrap support for Q5KIZ1 as seed ortholog is 74%.
Alternative seed ortholog is Q5KHK5 (39 bits away from this cluster)
Bootstrap support for H2R2U5 as seed ortholog is 100%.

Group of orthologs #555. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 P.troglodytes:351

Q5KQ43              	100.00%		G2HF36              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for G2HF36 as seed ortholog is 100%.

Group of orthologs #556. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:67

Q5KAD7              	100.00%		H2QJU4              	100.00%
Bootstrap support for Q5KAD7 as seed ortholog is 100%.
Bootstrap support for H2QJU4 as seed ortholog is 98%.

Group of orthologs #557. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 P.troglodytes:351

Q5KLE9              	100.00%		H2QH35              	100.00%
Bootstrap support for Q5KLE9 as seed ortholog is 100%.
Bootstrap support for H2QH35 as seed ortholog is 100%.

Group of orthologs #558. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 P.troglodytes:351

Q5KKQ4              	100.00%		H2QJF1              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for H2QJF1 as seed ortholog is 100%.

Group of orthologs #559. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 P.troglodytes:351

Q5KIQ7              	100.00%		H2R079              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for H2R079 as seed ortholog is 100%.

Group of orthologs #560. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:351

Q5KJ99              	100.00%		H2RE00              	100.00%
Bootstrap support for Q5KJ99 as seed ortholog is 99%.
Bootstrap support for H2RE00 as seed ortholog is 100%.

Group of orthologs #561. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.troglodytes:350

Q5KFS1              	100.00%		H2QG08              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 100%.
Bootstrap support for H2QG08 as seed ortholog is 100%.

Group of orthologs #562. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.troglodytes:350

Q5KDL7              	100.00%		H2QNG1              	100.00%
Bootstrap support for Q5KDL7 as seed ortholog is 100%.
Bootstrap support for H2QNG1 as seed ortholog is 100%.

Group of orthologs #563. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.troglodytes:350

Q5KAI7              	100.00%		H2QVP1              	100.00%
Bootstrap support for Q5KAI7 as seed ortholog is 100%.
Bootstrap support for H2QVP1 as seed ortholog is 100%.

Group of orthologs #564. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.troglodytes:189

Q5KE92              	100.00%		H2QTD5              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for H2QTD5 as seed ortholog is 99%.

Group of orthologs #565. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.troglodytes:350

Q5KN58              	100.00%		H2RDJ5              	100.00%
Bootstrap support for Q5KN58 as seed ortholog is 100%.
Bootstrap support for H2RDJ5 as seed ortholog is 100%.

Group of orthologs #566. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 P.troglodytes:349

Q5KPY7              	100.00%		H2Q5W6              	100.00%
Q5KKM8              	5.11%		
Bootstrap support for Q5KPY7 as seed ortholog is 100%.
Bootstrap support for H2Q5W6 as seed ortholog is 100%.

Group of orthologs #567. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 P.troglodytes:250

Q5K8U2              	100.00%		H2R452              	100.00%
Bootstrap support for Q5K8U2 as seed ortholog is 100%.
Bootstrap support for H2R452 as seed ortholog is 100%.

Group of orthologs #568. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 P.troglodytes:349

Q5KBY3              	100.00%		H2RCF9              	100.00%
Bootstrap support for Q5KBY3 as seed ortholog is 100%.
Bootstrap support for H2RCF9 as seed ortholog is 100%.

Group of orthologs #569. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.troglodytes:348

P0CN46              	100.00%		H2QAU7              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for H2QAU7 as seed ortholog is 100%.

Group of orthologs #570. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 P.troglodytes:347

Q5KFQ5              	100.00%		H2QV00              	100.00%
                    	       		H2QV01              	48.58%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for H2QV00 as seed ortholog is 100%.

Group of orthologs #571. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:251

Q5KGN7              	100.00%		H2Q775              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for H2Q775 as seed ortholog is 100%.

Group of orthologs #572. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 P.troglodytes:347

Q5KIT6              	100.00%		H2QI59              	100.00%
Bootstrap support for Q5KIT6 as seed ortholog is 100%.
Bootstrap support for H2QI59 as seed ortholog is 100%.

Group of orthologs #573. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:79

Q5K8T9              	100.00%		H2QPZ3              	100.00%
Bootstrap support for Q5K8T9 as seed ortholog is 95%.
Bootstrap support for H2QPZ3 as seed ortholog is 84%.

Group of orthologs #574. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:346

Q5K7Y1              	100.00%		H2R8C3              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 99%.
Bootstrap support for H2R8C3 as seed ortholog is 100%.

Group of orthologs #575. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 P.troglodytes:209

Q5KDK5              	100.00%		H2QHJ1              	100.00%
                    	       		H2RAJ0              	52.55%
Bootstrap support for Q5KDK5 as seed ortholog is 100%.
Bootstrap support for H2QHJ1 as seed ortholog is 100%.

Group of orthologs #576. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 P.troglodytes:109

Q5KJY8              	100.00%		H2QHF6              	100.00%
                    	       		H2QWJ3              	16.22%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for H2QHF6 as seed ortholog is 99%.

Group of orthologs #577. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 P.troglodytes:344

Q5KDU8              	100.00%		H2QJK6              	100.00%
                    	       		H2Q7K4              	58.05%
Bootstrap support for Q5KDU8 as seed ortholog is 100%.
Bootstrap support for H2QJK6 as seed ortholog is 100%.

Group of orthologs #578. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 P.troglodytes:344

Q5KEJ6              	100.00%		H2Q703              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for H2Q703 as seed ortholog is 100%.

Group of orthologs #579. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 P.troglodytes:344

Q5KH10              	100.00%		H2R0Q8              	100.00%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for H2R0Q8 as seed ortholog is 100%.

Group of orthologs #580. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 P.troglodytes:343

Q5K772              	100.00%		H2QCM9              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for H2QCM9 as seed ortholog is 100%.

Group of orthologs #581. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:39

Q5KG79              	100.00%		H2QY80              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 99%.
Bootstrap support for H2QY80 as seed ortholog is 76%.

Group of orthologs #582. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 P.troglodytes:343

Q5KIH5              	100.00%		H2R643              	100.00%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for H2R643 as seed ortholog is 100%.

Group of orthologs #583. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.troglodytes:167

Q5K721              	100.00%		H2R124              	100.00%
                    	       		H2QIW2              	39.92%
                    	       		H2QIL5              	10.84%
                    	       		Q5IS50              	7.01%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for H2R124 as seed ortholog is 99%.

Group of orthologs #584. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.troglodytes:342

P0CQ24              	100.00%		H2R2B4              	100.00%
Bootstrap support for P0CQ24 as seed ortholog is 100%.
Bootstrap support for H2R2B4 as seed ortholog is 100%.

Group of orthologs #585. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.troglodytes:235

Q5KN69              	100.00%		H2QR27              	100.00%
Bootstrap support for Q5KN69 as seed ortholog is 100%.
Bootstrap support for H2QR27 as seed ortholog is 100%.

Group of orthologs #586. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.troglodytes:342

Q5KHK9              	100.00%		H2QWP8              	100.00%
Bootstrap support for Q5KHK9 as seed ortholog is 100%.
Bootstrap support for H2QWP8 as seed ortholog is 100%.

Group of orthologs #587. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:265

Q5KHS3              	100.00%		H2R8T9              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 99%.
Bootstrap support for H2R8T9 as seed ortholog is 100%.

Group of orthologs #588. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.troglodytes:341

Q5KJG7              	100.00%		G2HF49              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for G2HF49 as seed ortholog is 100%.

Group of orthologs #589. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.troglodytes:341

Q5K8P5              	100.00%		H2QBQ1              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for H2QBQ1 as seed ortholog is 100%.

Group of orthologs #590. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.troglodytes:341

Q5KPQ4              	100.00%		H2QEZ3              	100.00%
Bootstrap support for Q5KPQ4 as seed ortholog is 100%.
Bootstrap support for H2QEZ3 as seed ortholog is 100%.

Group of orthologs #591. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.troglodytes:341

Q5KKT0              	100.00%		H2QR97              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for H2QR97 as seed ortholog is 100%.

Group of orthologs #592. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 P.troglodytes:267

Q5KM94              	100.00%		H2QKK7              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for H2QKK7 as seed ortholog is 100%.

Group of orthologs #593. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 P.troglodytes:240

Q5KDP4              	100.00%		H2QWZ3              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for H2QWZ3 as seed ortholog is 100%.

Group of orthologs #594. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.troglodytes:169

P0CQ90              	100.00%		H2Q8U7              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for H2Q8U7 as seed ortholog is 99%.

Group of orthologs #595. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:338 P.troglodytes:338

Q5KPH3              	100.00%		H2Q4U0              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for H2Q4U0 as seed ortholog is 100%.

Group of orthologs #596. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:159

P0CR08              	100.00%		H2Q761              	100.00%
Bootstrap support for P0CR08 as seed ortholog is 99%.
Bootstrap support for H2Q761 as seed ortholog is 99%.

Group of orthologs #597. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.troglodytes:337

Q5KEG3              	100.00%		H2PZY7              	100.00%
Bootstrap support for Q5KEG3 as seed ortholog is 100%.
Bootstrap support for H2PZY7 as seed ortholog is 100%.

Group of orthologs #598. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.troglodytes:337

Q5K7I8              	100.00%		H2QVP0              	100.00%
Bootstrap support for Q5K7I8 as seed ortholog is 100%.
Bootstrap support for H2QVP0 as seed ortholog is 100%.

Group of orthologs #599. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.troglodytes:144

P0CP12              	100.00%		H2R066              	100.00%
Bootstrap support for P0CP12 as seed ortholog is 100%.
Bootstrap support for H2R066 as seed ortholog is 99%.

Group of orthologs #600. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.troglodytes:66

Q5KCY3              	100.00%		H2R1B0              	100.00%
                    	       		H2QF27              	42.81%
                    	       		H2PYV2              	38.54%
Bootstrap support for Q5KCY3 as seed ortholog is 100%.
Bootstrap support for H2R1B0 as seed ortholog is 93%.

Group of orthologs #601. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.troglodytes:336

Q5KK57              	100.00%		G2HF99              	100.00%
Q5KN19              	5.73%		
Bootstrap support for Q5KK57 as seed ortholog is 100%.
Bootstrap support for G2HF99 as seed ortholog is 100%.

Group of orthologs #602. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.troglodytes:336

P0CM24              	100.00%		H2QFG6              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for H2QFG6 as seed ortholog is 100%.

Group of orthologs #603. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.troglodytes:336

Q5KDW3              	100.00%		H2QJH1              	100.00%
Bootstrap support for Q5KDW3 as seed ortholog is 100%.
Bootstrap support for H2QJH1 as seed ortholog is 100%.

Group of orthologs #604. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.troglodytes:68

Q5KEN3              	100.00%		H2QPV5              	100.00%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for H2QPV5 as seed ortholog is 95%.

Group of orthologs #605. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 P.troglodytes:335

Q5KCG6              	100.00%		H2Q2I6              	100.00%
Bootstrap support for Q5KCG6 as seed ortholog is 100%.
Bootstrap support for H2Q2I6 as seed ortholog is 100%.

Group of orthologs #606. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 P.troglodytes:335

P0CR86              	100.00%		H2R433              	100.00%
Bootstrap support for P0CR86 as seed ortholog is 100%.
Bootstrap support for H2R433 as seed ortholog is 100%.

Group of orthologs #607. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.troglodytes:168

Q5KI66              	100.00%		H2QC74              	100.00%
                    	       		H2QH96              	39.67%
                    	       		G2HFJ0              	19.29%
Bootstrap support for Q5KI66 as seed ortholog is 100%.
Bootstrap support for H2QC74 as seed ortholog is 100%.

Group of orthologs #608. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:170

Q5KL60              	100.00%		H2R2B0              	100.00%
                    	       		H2QQI4              	46.54%
                    	       		H2R189              	43.13%
Bootstrap support for Q5KL60 as seed ortholog is 99%.
Bootstrap support for H2R2B0 as seed ortholog is 99%.

Group of orthologs #609. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.troglodytes:222

Q5KNA1              	100.00%		G2HE98              	100.00%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for G2HE98 as seed ortholog is 100%.

Group of orthologs #610. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.troglodytes:232

Q5KKN8              	100.00%		H2Q3T2              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for H2Q3T2 as seed ortholog is 100%.

Group of orthologs #611. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.troglodytes:202

P0CN08              	100.00%		H2R1R7              	100.00%
Bootstrap support for P0CN08 as seed ortholog is 99%.
Bootstrap support for H2R1R7 as seed ortholog is 99%.

Group of orthologs #612. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.troglodytes:54

Q5K707              	100.00%		H2R3G8              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 100%.
Bootstrap support for H2R3G8 as seed ortholog is 95%.

Group of orthologs #613. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.troglodytes:178

Q5KC09              	100.00%		H2QJI4              	100.00%
                    	       		H2QZ01              	56.84%
Bootstrap support for Q5KC09 as seed ortholog is 100%.
Bootstrap support for H2QJI4 as seed ortholog is 99%.

Group of orthologs #614. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 P.troglodytes:330

Q5KIJ7              	100.00%		H2QX54              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for H2QX54 as seed ortholog is 100%.

Group of orthologs #615. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 P.troglodytes:329

Q5KI89              	100.00%		H2Q620              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for H2Q620 as seed ortholog is 100%.

Group of orthologs #616. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 P.troglodytes:328

Q5K8T6              	100.00%		H2RHZ2              	100.00%
                    	       		G2HED2              	47.49%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for H2RHZ2 as seed ortholog is 100%.

Group of orthologs #617. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:7 P.troglodytes:105

Q5KDJ3              	100.00%		H2PYU8              	100.00%
Bootstrap support for Q5KDJ3 as seed ortholog is 56%.
Alternative seed ortholog is Q5KAZ7 (7 bits away from this cluster)
Bootstrap support for H2PYU8 as seed ortholog is 99%.

Group of orthologs #618. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 P.troglodytes:328

Q5KG83              	100.00%		H2Q079              	100.00%
Bootstrap support for Q5KG83 as seed ortholog is 100%.
Bootstrap support for H2Q079 as seed ortholog is 100%.

Group of orthologs #619. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 P.troglodytes:328

Q5KFT4              	100.00%		H2QWV8              	100.00%
Bootstrap support for Q5KFT4 as seed ortholog is 100%.
Bootstrap support for H2QWV8 as seed ortholog is 100%.

Group of orthologs #620. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:327

Q5K761              	100.00%		H2Q5L8              	100.00%
                    	       		H2QGS7              	23.04%
Bootstrap support for Q5K761 as seed ortholog is 99%.
Bootstrap support for H2Q5L8 as seed ortholog is 100%.

Group of orthologs #621. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:169

P0CQ18              	100.00%		H2Q7A5              	100.00%
P0CQ20              	51.28%		
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for H2Q7A5 as seed ortholog is 99%.

Group of orthologs #622. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:327

Q5KLY2              	100.00%		H2QX69              	100.00%
P0CN76              	27.58%		
Bootstrap support for Q5KLY2 as seed ortholog is 100%.
Bootstrap support for H2QX69 as seed ortholog is 100%.

Group of orthologs #623. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:327

Q5KQ48              	100.00%		H2QXI2              	100.00%
                    	       		H2QXI1              	58.91%
Bootstrap support for Q5KQ48 as seed ortholog is 100%.
Bootstrap support for H2QXI2 as seed ortholog is 100%.

Group of orthologs #624. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:327

Q5KHY1              	100.00%		H2PYR9              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for H2PYR9 as seed ortholog is 100%.

Group of orthologs #625. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.troglodytes:214

Q5KIV0              	100.00%		H2PZ92              	100.00%
Bootstrap support for Q5KIV0 as seed ortholog is 100%.
Bootstrap support for H2PZ92 as seed ortholog is 100%.

Group of orthologs #626. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:92

Q5K6Z2              	100.00%		H2QR08              	100.00%
Bootstrap support for Q5K6Z2 as seed ortholog is 99%.
Bootstrap support for H2QR08 as seed ortholog is 99%.

Group of orthologs #627. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.troglodytes:326

Q5K7W5              	100.00%		H2QRP1              	100.00%
                    	       		H2QPE3              	67.79%
Bootstrap support for Q5K7W5 as seed ortholog is 100%.
Bootstrap support for H2QRP1 as seed ortholog is 100%.

Group of orthologs #628. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:198

Q5KD56              	100.00%		H2QQA2              	100.00%
Bootstrap support for Q5KD56 as seed ortholog is 82%.
Bootstrap support for H2QQA2 as seed ortholog is 99%.

Group of orthologs #629. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.troglodytes:326

Q5K8A2              	100.00%		H2R0C2              	100.00%
Bootstrap support for Q5K8A2 as seed ortholog is 100%.
Bootstrap support for H2R0C2 as seed ortholog is 100%.

Group of orthologs #630. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.troglodytes:325

Q5KAW7              	100.00%		H2Q7L6              	100.00%
Bootstrap support for Q5KAW7 as seed ortholog is 100%.
Bootstrap support for H2Q7L6 as seed ortholog is 100%.

Group of orthologs #631. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.troglodytes:325

Q5KI12              	100.00%		H2Q9L9              	100.00%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for H2Q9L9 as seed ortholog is 100%.

Group of orthologs #632. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.troglodytes:325

Q5KEG8              	100.00%		H2QQA1              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for H2QQA1 as seed ortholog is 100%.

Group of orthologs #633. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.troglodytes:325

P0CQ58              	100.00%		H2RD77              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for H2RD77 as seed ortholog is 100%.

Group of orthologs #634. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:35

Q5KCA0              	100.00%		H2Q6N5              	100.00%
                    	       		H2QYI7              	53.98%
                    	       		H2QUW8              	6.87%
Bootstrap support for Q5KCA0 as seed ortholog is 99%.
Bootstrap support for H2Q6N5 as seed ortholog is 87%.

Group of orthologs #635. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:23

P0CM16              	100.00%		G2HIU2              	100.00%
Bootstrap support for P0CM16 as seed ortholog is 100%.
Bootstrap support for G2HIU2 as seed ortholog is 91%.

Group of orthologs #636. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 P.troglodytes:84

Q5KP89              	100.00%		H2QYP9              	100.00%
                    	       		H2Q7B1              	34.81%
                    	       		H2QVS8              	32.95%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for H2QYP9 as seed ortholog is 92%.

Group of orthologs #637. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:80

Q5KC86              	100.00%		H2PY98              	100.00%
Q5KFY4              	8.33%		
Bootstrap support for Q5KC86 as seed ortholog is 100%.
Bootstrap support for H2PY98 as seed ortholog is 99%.

Group of orthologs #638. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:10

Q5KAN2              	100.00%		H2QKD7              	100.00%
                    	       		H2QW93              	32.81%
                    	       		H2R6X6              	31.24%
Bootstrap support for Q5KAN2 as seed ortholog is 99%.
Bootstrap support for H2QKD7 as seed ortholog is 59%.
Alternative seed ortholog is H2QDK7 (10 bits away from this cluster)

Group of orthologs #639. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 P.troglodytes:321

Q5KIV1              	100.00%		H2QKQ2              	100.00%
                    	       		H2QED5              	57.23%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for H2QKQ2 as seed ortholog is 100%.

Group of orthologs #640. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:62

Q5KHY6              	100.00%		H2QLT3              	100.00%
                    	       		H2QAI5              	18.67%
Bootstrap support for Q5KHY6 as seed ortholog is 99%.
Bootstrap support for H2QLT3 as seed ortholog is 97%.

Group of orthologs #641. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 P.troglodytes:321

Q5KGG9              	100.00%		H2R7A6              	100.00%
                    	       		H2Q9A0              	38.82%
Bootstrap support for Q5KGG9 as seed ortholog is 100%.
Bootstrap support for H2R7A6 as seed ortholog is 100%.

Group of orthologs #642. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.troglodytes:108

Q5K8I9              	100.00%		H2QHZ8              	100.00%
                    	       		H2Q460              	60.87%
Bootstrap support for Q5K8I9 as seed ortholog is 100%.
Bootstrap support for H2QHZ8 as seed ortholog is 100%.

Group of orthologs #643. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.troglodytes:320

P0CM56              	100.00%		H2QUY3              	100.00%
Bootstrap support for P0CM56 as seed ortholog is 100%.
Bootstrap support for H2QUY3 as seed ortholog is 100%.

Group of orthologs #644. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.troglodytes:320

Q5KQ60              	100.00%		H2QBI1              	100.00%
Bootstrap support for Q5KQ60 as seed ortholog is 100%.
Bootstrap support for H2QBI1 as seed ortholog is 100%.

Group of orthologs #645. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.troglodytes:318

Q5K6Y3              	100.00%		H2QS96              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for H2QS96 as seed ortholog is 100%.

Group of orthologs #646. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.troglodytes:318

Q5KJQ1              	100.00%		H2QRK2              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for H2QRK2 as seed ortholog is 100%.

Group of orthologs #647. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.troglodytes:114

Q5K9V2              	100.00%		H2QNB3              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for H2QNB3 as seed ortholog is 100%.

Group of orthologs #648. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.troglodytes:317

Q5KIG6              	100.00%		H2QT27              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for H2QT27 as seed ortholog is 100%.

Group of orthologs #649. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.troglodytes:317

Q5K9D3              	100.00%		H2R3I4              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 100%.
Bootstrap support for H2R3I4 as seed ortholog is 100%.

Group of orthologs #650. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.troglodytes:316

Q5KGP1              	100.00%		H2QZA9              	100.00%
                    	       		H2R7N9              	37.85%
Bootstrap support for Q5KGP1 as seed ortholog is 100%.
Bootstrap support for H2QZA9 as seed ortholog is 100%.

Group of orthologs #651. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.troglodytes:316

P0CM80              	100.00%		H2Q7G3              	100.00%
Bootstrap support for P0CM80 as seed ortholog is 100%.
Bootstrap support for H2Q7G3 as seed ortholog is 100%.

Group of orthologs #652. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.troglodytes:316

Q5KJU2              	100.00%		H2PZE6              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for H2PZE6 as seed ortholog is 100%.

Group of orthologs #653. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.troglodytes:316

Q5KI80              	100.00%		H2Q4H3              	100.00%
Bootstrap support for Q5KI80 as seed ortholog is 100%.
Bootstrap support for H2Q4H3 as seed ortholog is 100%.

Group of orthologs #654. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.troglodytes:316

Q5KFZ3              	100.00%		H2QHW9              	100.00%
Bootstrap support for Q5KFZ3 as seed ortholog is 100%.
Bootstrap support for H2QHW9 as seed ortholog is 100%.

Group of orthologs #655. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.troglodytes:218

Q5KQ65              	100.00%		H2QUX0              	100.00%
Bootstrap support for Q5KQ65 as seed ortholog is 100%.
Bootstrap support for H2QUX0 as seed ortholog is 100%.

Group of orthologs #656. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.troglodytes:315

Q5KMA6              	100.00%		H2Q886              	100.00%
                    	       		H2R6C7              	78.26%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for H2Q886 as seed ortholog is 100%.

Group of orthologs #657. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.troglodytes:315

Q5KK35              	100.00%		H2QA33              	100.00%
Bootstrap support for Q5KK35 as seed ortholog is 100%.
Bootstrap support for H2QA33 as seed ortholog is 100%.

Group of orthologs #658. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.troglodytes:315

Q5KCE8              	100.00%		H2QNX4              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 100%.
Bootstrap support for H2QNX4 as seed ortholog is 100%.

Group of orthologs #659. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:315

Q5KE88              	100.00%		H2QTI4              	100.00%
Bootstrap support for Q5KE88 as seed ortholog is 99%.
Bootstrap support for H2QTI4 as seed ortholog is 100%.

Group of orthologs #660. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.troglodytes:240

Q5KC90              	100.00%		H2R208              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for H2R208 as seed ortholog is 100%.

Group of orthologs #661. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.troglodytes:314

Q5KG75              	100.00%		H2Q6N3              	100.00%
                    	       		H2Q0W4              	7.06%
Bootstrap support for Q5KG75 as seed ortholog is 100%.
Bootstrap support for H2Q6N3 as seed ortholog is 100%.

Group of orthologs #662. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.troglodytes:314

Q5KC64              	100.00%		H2Q1D7              	100.00%
Bootstrap support for Q5KC64 as seed ortholog is 100%.
Bootstrap support for H2Q1D7 as seed ortholog is 100%.

Group of orthologs #663. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 P.troglodytes:313

Q5KJQ8              	100.00%		H2QLR7              	100.00%
Bootstrap support for Q5KJQ8 as seed ortholog is 100%.
Bootstrap support for H2QLR7 as seed ortholog is 100%.

Group of orthologs #664. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.troglodytes:312

Q5K950              	100.00%		H2Q0S0              	100.00%
Bootstrap support for Q5K950 as seed ortholog is 100%.
Bootstrap support for H2Q0S0 as seed ortholog is 100%.

Group of orthologs #665. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.troglodytes:312

P0CS70              	100.00%		H2QGZ5              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for H2QGZ5 as seed ortholog is 100%.

Group of orthologs #666. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.troglodytes:312

Q5KHS1              	100.00%		H2Q6I1              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for H2Q6I1 as seed ortholog is 100%.

Group of orthologs #667. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.troglodytes:312

Q5KNF4              	100.00%		H2QAJ3              	100.00%
Bootstrap support for Q5KNF4 as seed ortholog is 100%.
Bootstrap support for H2QAJ3 as seed ortholog is 100%.

Group of orthologs #668. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.troglodytes:312

Q5KL14              	100.00%		H2QGR2              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for H2QGR2 as seed ortholog is 100%.

Group of orthologs #669. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 P.troglodytes:311

P0CN50              	100.00%		H2QWK6              	100.00%
Bootstrap support for P0CN50 as seed ortholog is 100%.
Bootstrap support for H2QWK6 as seed ortholog is 100%.

Group of orthologs #670. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 P.troglodytes:311

Q5KP54              	100.00%		H2R9B8              	100.00%
Bootstrap support for Q5KP54 as seed ortholog is 100%.
Bootstrap support for H2R9B8 as seed ortholog is 100%.

Group of orthologs #671. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

Q5K995              	100.00%		H2Q159              	100.00%
                    	       		H2R138              	51.84%
                    	       		H2QL36              	35.53%
Bootstrap support for Q5K995 as seed ortholog is 100%.
Bootstrap support for H2Q159 as seed ortholog is 100%.

Group of orthologs #672. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.troglodytes:154

Q5KIW0              	100.00%		H2R716              	100.00%
                    	       		H2QLD6              	8.25%
Bootstrap support for Q5KIW0 as seed ortholog is 99%.
Bootstrap support for H2R716 as seed ortholog is 99%.

Group of orthologs #673. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.troglodytes:310

Q5K9Y2              	100.00%		H2QMW3              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for H2QMW3 as seed ortholog is 100%.

Group of orthologs #674. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.troglodytes:310

Q5KKE2              	100.00%		H2QLA2              	100.00%
Bootstrap support for Q5KKE2 as seed ortholog is 100%.
Bootstrap support for H2QLA2 as seed ortholog is 100%.

Group of orthologs #675. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.troglodytes:309

Q5KQ33              	100.00%		H2QGN3              	100.00%
                    	       		H2Q850              	29.51%
                    	       		H2R1X9              	25.89%
Bootstrap support for Q5KQ33 as seed ortholog is 100%.
Bootstrap support for H2QGN3 as seed ortholog is 100%.

Group of orthologs #676. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 P.troglodytes:308

P0CP10              	100.00%		H2QA85              	100.00%
                    	       		H2QE54              	7.58%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for H2QA85 as seed ortholog is 100%.

Group of orthologs #677. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 P.troglodytes:196

Q5KJD3              	100.00%		H2QBI7              	100.00%
Bootstrap support for Q5KJD3 as seed ortholog is 100%.
Bootstrap support for H2QBI7 as seed ortholog is 99%.

Group of orthologs #678. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 P.troglodytes:308

Q5K9Y4              	100.00%		H2R3F6              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for H2R3F6 as seed ortholog is 100%.

Group of orthologs #679. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:95

Q5KPZ0              	100.00%		H2Q178              	100.00%
                    	       		H2Q420              	17.32%
Bootstrap support for Q5KPZ0 as seed ortholog is 99%.
Bootstrap support for H2Q178 as seed ortholog is 97%.

Group of orthologs #680. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 P.troglodytes:307

Q5KH66              	100.00%		H2QIQ2              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for H2QIQ2 as seed ortholog is 100%.

Group of orthologs #681. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.troglodytes:149

P0CS50              	100.00%		H2QM22              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 100%.
Bootstrap support for H2QM22 as seed ortholog is 99%.

Group of orthologs #682. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.troglodytes:306

Q5KBN7              	100.00%		H2QHQ7              	100.00%
Bootstrap support for Q5KBN7 as seed ortholog is 100%.
Bootstrap support for H2QHQ7 as seed ortholog is 100%.

Group of orthologs #683. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.troglodytes:306

Q5KPC1              	100.00%		H2QBT0              	100.00%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for H2QBT0 as seed ortholog is 100%.

Group of orthologs #684. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.troglodytes:306

Q5KK40              	100.00%		H2QML6              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for H2QML6 as seed ortholog is 100%.

Group of orthologs #685. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.troglodytes:306

Q5K7E6              	100.00%		H2R025              	100.00%
Bootstrap support for Q5K7E6 as seed ortholog is 100%.
Bootstrap support for H2R025 as seed ortholog is 100%.

Group of orthologs #686. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.troglodytes:149

Q5KKK5              	100.00%		H2QP40              	100.00%
Bootstrap support for Q5KKK5 as seed ortholog is 100%.
Bootstrap support for H2QP40 as seed ortholog is 99%.

Group of orthologs #687. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:160

Q5KNU2              	100.00%		H2QSP2              	100.00%
Bootstrap support for Q5KNU2 as seed ortholog is 99%.
Bootstrap support for H2QSP2 as seed ortholog is 99%.

Group of orthologs #688. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:95

Q5KM47              	100.00%		H2RDK3              	100.00%
                    	       		H2Q2T0              	40.15%
                    	       		H2RAC1              	39.39%
Bootstrap support for Q5KM47 as seed ortholog is 99%.
Bootstrap support for H2RDK3 as seed ortholog is 99%.

Group of orthologs #689. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.troglodytes:247

Q5K809              	100.00%		H2PYB2              	100.00%
Q5KNE6              	44.47%		
Bootstrap support for Q5K809 as seed ortholog is 100%.
Bootstrap support for H2PYB2 as seed ortholog is 100%.

Group of orthologs #690. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.troglodytes:305

Q5KC51              	100.00%		H2Q8H4              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for H2Q8H4 as seed ortholog is 100%.

Group of orthologs #691. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:305

Q5KNK5              	100.00%		H2QL34              	100.00%
Bootstrap support for Q5KNK5 as seed ortholog is 99%.
Bootstrap support for H2QL34 as seed ortholog is 100%.

Group of orthologs #692. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.troglodytes:305

Q5KJR0              	100.00%		H2QVR6              	100.00%
Bootstrap support for Q5KJR0 as seed ortholog is 100%.
Bootstrap support for H2QVR6 as seed ortholog is 100%.

Group of orthologs #693. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:97

Q5KQ09              	100.00%		H2Q5Q3              	100.00%
Q5KA14              	12.27%		
Q5KCH2              	11.77%		
Q5KJA6              	11.52%		
Q5KJA2              	11.15%		
Q5KCB5              	10.78%		
Q5KD25              	10.16%		
Q5KDS2              	8.80%		
Bootstrap support for Q5KQ09 as seed ortholog is 97%.
Bootstrap support for H2Q5Q3 as seed ortholog is 98%.

Group of orthologs #694. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 P.troglodytes:132

Q5KBD9              	100.00%		H2Q3R2              	100.00%
                    	       		H2QLH9              	47.41%
Bootstrap support for Q5KBD9 as seed ortholog is 100%.
Bootstrap support for H2Q3R2 as seed ortholog is 99%.

Group of orthologs #695. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 P.troglodytes:304

Q5KGN0              	100.00%		H2QUS3              	100.00%
                    	       		H2Q750              	37.26%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for H2QUS3 as seed ortholog is 100%.

Group of orthologs #696. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 P.troglodytes:304

Q5K955              	100.00%		H2Q9D6              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for H2Q9D6 as seed ortholog is 100%.

Group of orthologs #697. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:168

Q5KKX6              	100.00%		H2QK95              	100.00%
Bootstrap support for Q5KKX6 as seed ortholog is 99%.
Bootstrap support for H2QK95 as seed ortholog is 99%.

Group of orthologs #698. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 P.troglodytes:206

Q5KD50              	100.00%		H2QAW8              	100.00%
                    	       		H2Q487              	55.47%
                    	       		H2Q6T6              	53.59%
                    	       		H2QCK8              	52.19%
                    	       		H2Q9P6              	15.62%
                    	       		H2QXK0              	14.69%
Bootstrap support for Q5KD50 as seed ortholog is 100%.
Bootstrap support for H2QAW8 as seed ortholog is 100%.

Group of orthologs #699. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 P.troglodytes:303

Q5KMT6              	100.00%		H2QST0              	100.00%
Bootstrap support for Q5KMT6 as seed ortholog is 100%.
Bootstrap support for H2QST0 as seed ortholog is 100%.

Group of orthologs #700. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.troglodytes:222

Q5KB90              	100.00%		H2QL08              	100.00%
                    	       		H2QGB5              	31.02%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for H2QL08 as seed ortholog is 100%.

Group of orthologs #701. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.troglodytes:302

Q5K9R5              	100.00%		H2QAR9              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for H2QAR9 as seed ortholog is 100%.

Group of orthologs #702. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.troglodytes:302

Q5K9U9              	100.00%		H2QQK7              	100.00%
Bootstrap support for Q5K9U9 as seed ortholog is 100%.
Bootstrap support for H2QQK7 as seed ortholog is 100%.

Group of orthologs #703. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:140

P0CQ94              	100.00%		H2R3Z1              	100.00%
Bootstrap support for P0CQ94 as seed ortholog is 99%.
Bootstrap support for H2R3Z1 as seed ortholog is 99%.

Group of orthologs #704. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.troglodytes:227

Q5KKC2              	100.00%		H2QXV4              	100.00%
                    	       		H2R3I7              	10.67%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for H2QXV4 as seed ortholog is 100%.

Group of orthologs #705. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.troglodytes:301

Q5KJ16              	100.00%		H2R943              	100.00%
                    	       		H2RHA6              	67.87%
Bootstrap support for Q5KJ16 as seed ortholog is 100%.
Bootstrap support for H2R943 as seed ortholog is 100%.

Group of orthologs #706. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.troglodytes:126

P0CR04              	100.00%		H2QCS3              	100.00%
Bootstrap support for P0CR04 as seed ortholog is 99%.
Bootstrap support for H2QCS3 as seed ortholog is 99%.

Group of orthologs #707. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:34 P.troglodytes:301

Q5KQ18              	100.00%		G2HHK9              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 91%.
Bootstrap support for G2HHK9 as seed ortholog is 100%.

Group of orthologs #708. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.troglodytes:234

Q5KJS0              	100.00%		H2Q6P4              	100.00%
Bootstrap support for Q5KJS0 as seed ortholog is 100%.
Bootstrap support for H2Q6P4 as seed ortholog is 100%.

Group of orthologs #709. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.troglodytes:301

P0CP92              	100.00%		H2QQZ4              	100.00%
Bootstrap support for P0CP92 as seed ortholog is 100%.
Bootstrap support for H2QQZ4 as seed ortholog is 100%.

Group of orthologs #710. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.troglodytes:301

P0CR50              	100.00%		H2QRT5              	100.00%
Bootstrap support for P0CR50 as seed ortholog is 100%.
Bootstrap support for H2QRT5 as seed ortholog is 100%.

Group of orthologs #711. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.troglodytes:301

Q5KIY7              	100.00%		H2QQS5              	100.00%
Bootstrap support for Q5KIY7 as seed ortholog is 100%.
Bootstrap support for H2QQS5 as seed ortholog is 100%.

Group of orthologs #712. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.troglodytes:77

Q5KKP1              	100.00%		Q9XT09              	100.00%
                    	       		H2QF06              	65.58%
Bootstrap support for Q5KKP1 as seed ortholog is 100%.
Bootstrap support for Q9XT09 as seed ortholog is 95%.

Group of orthologs #713. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.troglodytes:300

Q5KCS1              	100.00%		G2HI89              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for G2HI89 as seed ortholog is 100%.

Group of orthologs #714. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.troglodytes:300

Q5KLS0              	100.00%		H2R5C6              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for H2R5C6 as seed ortholog is 100%.

Group of orthologs #715. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:175

Q5K833              	100.00%		H2QCF4              	100.00%
Q5K840              	75.85%		H2R9K6              	49.11%
                    	       		H2R571              	17.41%
Bootstrap support for Q5K833 as seed ortholog is 99%.
Bootstrap support for H2QCF4 as seed ortholog is 100%.

Group of orthologs #716. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 P.troglodytes:299

Q5K9V4              	100.00%		H2QE60              	100.00%
Bootstrap support for Q5K9V4 as seed ortholog is 100%.
Bootstrap support for H2QE60 as seed ortholog is 100%.

Group of orthologs #717. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 P.troglodytes:299

Q5KF16              	100.00%		H2QNW1              	100.00%
Bootstrap support for Q5KF16 as seed ortholog is 100%.
Bootstrap support for H2QNW1 as seed ortholog is 100%.

Group of orthologs #718. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:69

Q5KFU4              	100.00%		H2Q4F4              	100.00%
                    	       		H2QJI3              	20.72%
                    	       		H2Q4F5              	7.16%
Bootstrap support for Q5KFU4 as seed ortholog is 100%.
Bootstrap support for H2Q4F4 as seed ortholog is 97%.

Group of orthologs #719. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:126

Q5KI67              	100.00%		H2Q278              	100.00%
Bootstrap support for Q5KI67 as seed ortholog is 100%.
Bootstrap support for H2Q278 as seed ortholog is 99%.

Group of orthologs #720. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:298

Q5KN85              	100.00%		H2Q9F0              	100.00%
Bootstrap support for Q5KN85 as seed ortholog is 99%.
Bootstrap support for H2Q9F0 as seed ortholog is 100%.

Group of orthologs #721. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:298

Q5KJD4              	100.00%		H2QM70              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for H2QM70 as seed ortholog is 100%.

Group of orthologs #722. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:298

Q5KPZ1              	100.00%		H2QNU6              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for H2QNU6 as seed ortholog is 100%.

Group of orthologs #723. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.troglodytes:298

Q5KE08              	100.00%		H2R400              	100.00%
Bootstrap support for Q5KE08 as seed ortholog is 100%.
Bootstrap support for H2R400 as seed ortholog is 100%.

Group of orthologs #724. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 P.troglodytes:129

Q5KPG1              	100.00%		H2Q3K5              	100.00%
                    	       		H2Q4J4              	62.67%
                    	       		H2Q417              	12.95%
Bootstrap support for Q5KPG1 as seed ortholog is 100%.
Bootstrap support for H2Q3K5 as seed ortholog is 98%.

Group of orthologs #725. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 P.troglodytes:215

Q5KAM3              	100.00%		H2QNE0              	100.00%
                    	       		H2Q6W3              	29.53%
Bootstrap support for Q5KAM3 as seed ortholog is 100%.
Bootstrap support for H2QNE0 as seed ortholog is 100%.

Group of orthologs #726. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 P.troglodytes:216

Q5K8T0              	100.00%		H2PZV8              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for H2PZV8 as seed ortholog is 100%.

Group of orthologs #727. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 P.troglodytes:297

Q5KDM0              	100.00%		H2PY56              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for H2PY56 as seed ortholog is 100%.

Group of orthologs #728. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.troglodytes:296

Q5K8X8              	100.00%		G2HH32              	100.00%
                    	       		H2QSC2              	46.41%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for G2HH32 as seed ortholog is 100%.

Group of orthologs #729. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.troglodytes:296

Q5KHF9              	100.00%		H2Q212              	100.00%
                    	       		H2QPZ6              	27.95%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for H2Q212 as seed ortholog is 100%.

Group of orthologs #730. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.troglodytes:296

Q5KAT4              	100.00%		H2QTH0              	100.00%
Q5KAV3              	59.42%		
Bootstrap support for Q5KAT4 as seed ortholog is 100%.
Bootstrap support for H2QTH0 as seed ortholog is 100%.

Group of orthologs #731. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:57

Q5KNV3              	100.00%		H2QY07              	100.00%
                    	       		H2RAF8              	18.37%
Bootstrap support for Q5KNV3 as seed ortholog is 90%.
Bootstrap support for H2QY07 as seed ortholog is 83%.

Group of orthologs #732. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.troglodytes:296

P0CO12              	100.00%		H2Q3D6              	100.00%
Bootstrap support for P0CO12 as seed ortholog is 100%.
Bootstrap support for H2Q3D6 as seed ortholog is 100%.

Group of orthologs #733. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.troglodytes:296

Q5K8C0              	100.00%		H2Q2B5              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for H2Q2B5 as seed ortholog is 100%.

Group of orthologs #734. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:296

Q9HFU4              	100.00%		A5A6K3              	100.00%
Bootstrap support for Q9HFU4 as seed ortholog is 99%.
Bootstrap support for A5A6K3 as seed ortholog is 100%.

Group of orthologs #735. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:132 P.troglodytes:39

Q5KNQ9              	100.00%		H2R344              	100.00%
                    	       		H2R5D9              	21.68%
                    	       		H2Q3T7              	19.34%
                    	       		H2QSZ6              	11.91%
                    	       		H2R5W4              	7.81%
Bootstrap support for Q5KNQ9 as seed ortholog is 99%.
Bootstrap support for H2R344 as seed ortholog is 85%.

Group of orthologs #736. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.troglodytes:52

Q5K880              	100.00%		H2Q894              	100.00%
Bootstrap support for Q5K880 as seed ortholog is 100%.
Bootstrap support for H2Q894 as seed ortholog is 99%.

Group of orthologs #737. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.troglodytes:295

Q5KCD2              	100.00%		H2R7P1              	100.00%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for H2R7P1 as seed ortholog is 100%.

Group of orthologs #738. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.troglodytes:166

Q5KCI0              	100.00%		A6H907              	100.00%
                    	       		H2RD22              	100.00%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for A6H907 as seed ortholog is 100%.
Bootstrap support for H2RD22 as seed ortholog is 100%.

Group of orthologs #739. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:294

Q5KEF4              	100.00%		H2Q4W7              	100.00%
Bootstrap support for Q5KEF4 as seed ortholog is 99%.
Bootstrap support for H2Q4W7 as seed ortholog is 100%.

Group of orthologs #740. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.troglodytes:294

Q5KK62              	100.00%		H2QBH6              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for H2QBH6 as seed ortholog is 100%.

Group of orthologs #741. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.troglodytes:294

Q5KGW0              	100.00%		H2QH38              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for H2QH38 as seed ortholog is 100%.

Group of orthologs #742. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:39

Q5K854              	100.00%		H2R207              	100.00%
Bootstrap support for Q5K854 as seed ortholog is 99%.
Bootstrap support for H2R207 as seed ortholog is 93%.

Group of orthologs #743. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.troglodytes:161

P0CM04              	100.00%		H2Q6P3              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 100%.
Bootstrap support for H2Q6P3 as seed ortholog is 99%.

Group of orthologs #744. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.troglodytes:292

P0CQ56              	100.00%		H2QMC2              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for H2QMC2 as seed ortholog is 100%.

Group of orthologs #745. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.troglodytes:99

Q5KDP3              	100.00%		H2QZB3              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for H2QZB3 as seed ortholog is 99%.

Group of orthologs #746. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.troglodytes:203

Q5KDC2              	100.00%		P60051              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 100%.
Bootstrap support for P60051 as seed ortholog is 99%.

Group of orthologs #747. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.troglodytes:171

Q5KPE3              	100.00%		H2RA03              	100.00%
Bootstrap support for Q5KPE3 as seed ortholog is 100%.
Bootstrap support for H2RA03 as seed ortholog is 100%.

Group of orthologs #748. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 P.troglodytes:291

P0CS80              	100.00%		H2Q6C5              	100.00%
Bootstrap support for P0CS80 as seed ortholog is 100%.
Bootstrap support for H2Q6C5 as seed ortholog is 100%.

Group of orthologs #749. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:23

Q5KD75              	100.00%		H2QWH8              	100.00%
                    	       		A4K2N7              	66.86%
Bootstrap support for Q5KD75 as seed ortholog is 100%.
Bootstrap support for H2QWH8 as seed ortholog is 93%.

Group of orthologs #750. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:290

Q5KBK6              	100.00%		H2QJR5              	100.00%
Bootstrap support for Q5KBK6 as seed ortholog is 99%.
Bootstrap support for H2QJR5 as seed ortholog is 100%.

Group of orthologs #751. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.troglodytes:290

Q5KKU8              	100.00%		H2QPT4              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for H2QPT4 as seed ortholog is 100%.

Group of orthologs #752. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:168

Q5K7W2              	100.00%		G2HGB9              	100.00%
Q5K7W1              	78.44%		H2QQI6              	40.99%
                    	       		H2RG37              	10.17%
Bootstrap support for Q5K7W2 as seed ortholog is 100%.
Bootstrap support for G2HGB9 as seed ortholog is 100%.

Group of orthologs #753. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 P.troglodytes:174

Q5K7J7              	100.00%		G2HJ78              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 100%.
Bootstrap support for G2HJ78 as seed ortholog is 99%.

Group of orthologs #754. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 P.troglodytes:289

P0CN24              	100.00%		H2Q891              	100.00%
Bootstrap support for P0CN24 as seed ortholog is 100%.
Bootstrap support for H2Q891 as seed ortholog is 100%.

Group of orthologs #755. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 P.troglodytes:289

Q5KBR5              	100.00%		H2QR13              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for H2QR13 as seed ortholog is 100%.

Group of orthologs #756. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 P.troglodytes:288

Q5KHK1              	100.00%		H2Q204              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for H2Q204 as seed ortholog is 100%.

Group of orthologs #757. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 P.troglodytes:288

Q5KEA3              	100.00%		H2R3N9              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for H2R3N9 as seed ortholog is 100%.

Group of orthologs #758. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.troglodytes:287

Q5K8J5              	100.00%		H2QIK2              	100.00%
                    	       		H2QW37              	43.79%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for H2QIK2 as seed ortholog is 100%.

Group of orthologs #759. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.troglodytes:215

P0CO44              	100.00%		H2Q406              	100.00%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for H2Q406 as seed ortholog is 100%.

Group of orthologs #760. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.troglodytes:287

Q5KB98              	100.00%		H2Q432              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for H2Q432 as seed ortholog is 100%.

Group of orthologs #761. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.troglodytes:287

Q5KA36              	100.00%		H2Q5P6              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for H2Q5P6 as seed ortholog is 100%.

Group of orthologs #762. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.troglodytes:287

Q5KCA4              	100.00%		H2QNK8              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for H2QNK8 as seed ortholog is 100%.

Group of orthologs #763. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.troglodytes:285

Q5KLL4              	100.00%		G2HIX7              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for G2HIX7 as seed ortholog is 100%.

Group of orthologs #764. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.troglodytes:285

Q5KIJ1              	100.00%		H2RGA7              	100.00%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for H2RGA7 as seed ortholog is 100%.

Group of orthologs #765. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.troglodytes:285

Q5KGP7              	100.00%		Q0MQI0              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for Q0MQI0 as seed ortholog is 100%.

Group of orthologs #766. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:284

Q5K8Z2              	100.00%		H2Q8S6              	100.00%
                    	       		H2QHX6              	68.00%
Bootstrap support for Q5K8Z2 as seed ortholog is 100%.
Bootstrap support for H2Q8S6 as seed ortholog is 100%.

Group of orthologs #767. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:35 P.troglodytes:284

Q5KIR0              	100.00%		H2QJY2              	100.00%
                    	       		H2R3B2              	9.64%
Bootstrap support for Q5KIR0 as seed ortholog is 81%.
Bootstrap support for H2QJY2 as seed ortholog is 100%.

Group of orthologs #768. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:284

Q5K6V3              	100.00%		H2PYE5              	100.00%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for H2PYE5 as seed ortholog is 100%.

Group of orthologs #769. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:72

Q5KEQ3              	100.00%		H2PZ20              	100.00%
Bootstrap support for Q5KEQ3 as seed ortholog is 95%.
Bootstrap support for H2PZ20 as seed ortholog is 86%.

Group of orthologs #770. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:284

Q5KJJ3              	100.00%		G2HJ63              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for G2HJ63 as seed ortholog is 100%.

Group of orthologs #771. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.troglodytes:284

Q5KAL7              	100.00%		H2Q6S9              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for H2Q6S9 as seed ortholog is 100%.

Group of orthologs #772. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:284

Q5KH84              	100.00%		H2Q2C9              	100.00%
Bootstrap support for Q5KH84 as seed ortholog is 100%.
Bootstrap support for H2Q2C9 as seed ortholog is 100%.

Group of orthologs #773. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:82

Q5KMN8              	100.00%		H2PZS1              	100.00%
Bootstrap support for Q5KMN8 as seed ortholog is 99%.
Bootstrap support for H2PZS1 as seed ortholog is 97%.

Group of orthologs #774. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:284

Q5K947              	100.00%		H2QHB9              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for H2QHB9 as seed ortholog is 100%.

Group of orthologs #775. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.troglodytes:284

Q5KBX4              	100.00%		H2QWH6              	100.00%
Bootstrap support for Q5KBX4 as seed ortholog is 100%.
Bootstrap support for H2QWH6 as seed ortholog is 100%.

Group of orthologs #776. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 P.troglodytes:283

Q5KFC5              	100.00%		H2QW04              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for H2QW04 as seed ortholog is 100%.

Group of orthologs #777. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 P.troglodytes:283

Q5K9W9              	100.00%		H2R1Y3              	100.00%
Bootstrap support for Q5K9W9 as seed ortholog is 100%.
Bootstrap support for H2R1Y3 as seed ortholog is 100%.

Group of orthologs #778. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 P.troglodytes:283

Q5KPK4              	100.00%		H2QUQ0              	100.00%
Bootstrap support for Q5KPK4 as seed ortholog is 100%.
Bootstrap support for H2QUQ0 as seed ortholog is 100%.

Group of orthologs #779. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.troglodytes:282

Q5KCG5              	100.00%		H2QUZ4              	100.00%
Bootstrap support for Q5KCG5 as seed ortholog is 100%.
Bootstrap support for H2QUZ4 as seed ortholog is 100%.

Group of orthologs #780. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 P.troglodytes:281

Q5KN41              	100.00%		H2QX14              	100.00%
                    	       		H2R4Q2              	92.75%
Bootstrap support for Q5KN41 as seed ortholog is 100%.
Bootstrap support for H2QX14 as seed ortholog is 100%.

Group of orthologs #781. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 P.troglodytes:281

Q5KNX1              	100.00%		H2Q4Z5              	100.00%
Bootstrap support for Q5KNX1 as seed ortholog is 100%.
Bootstrap support for H2Q4Z5 as seed ortholog is 100%.

Group of orthologs #782. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 P.troglodytes:48

Q5KFD9              	100.00%		H2QSR8              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for H2QSR8 as seed ortholog is 93%.

Group of orthologs #783. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.troglodytes:280

Q5KKJ1              	100.00%		H2Q9L3              	100.00%
Q5KCW7              	5.19%		
Bootstrap support for Q5KKJ1 as seed ortholog is 100%.
Bootstrap support for H2Q9L3 as seed ortholog is 100%.

Group of orthologs #784. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.troglodytes:280

P0CN94              	100.00%		H2Q6V5              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for H2Q6V5 as seed ortholog is 100%.

Group of orthologs #785. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.troglodytes:280

P0CN60              	100.00%		H2Q9V0              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for H2Q9V0 as seed ortholog is 100%.

Group of orthologs #786. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.troglodytes:201

Q5KMX1              	100.00%		H2Q5J4              	100.00%
Bootstrap support for Q5KMX1 as seed ortholog is 100%.
Bootstrap support for H2Q5J4 as seed ortholog is 100%.

Group of orthologs #787. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.troglodytes:62

Q5KI33              	100.00%		H2QNJ1              	100.00%
                    	       		H2QYI2              	42.91%
                    	       		H2R4I7              	41.64%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for H2QNJ1 as seed ortholog is 89%.

Group of orthologs #788. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:25

Q5K7H6              	100.00%		G2HF11              	100.00%
Bootstrap support for Q5K7H6 as seed ortholog is 100%.
Bootstrap support for G2HF11 as seed ortholog is 69%.
Alternative seed ortholog is G2HFN6 (25 bits away from this cluster)

Group of orthologs #789. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.troglodytes:279

Q5KEZ6              	100.00%		H2PZI0              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for H2PZI0 as seed ortholog is 100%.

Group of orthologs #790. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.troglodytes:279

Q5K7Z7              	100.00%		H2R085              	100.00%
Bootstrap support for Q5K7Z7 as seed ortholog is 100%.
Bootstrap support for H2R085 as seed ortholog is 100%.

Group of orthologs #791. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.troglodytes:279

Q5KGE3              	100.00%		H2QSV7              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for H2QSV7 as seed ortholog is 100%.

Group of orthologs #792. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.troglodytes:279

Q5KCK3              	100.00%		H2R0B1              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for H2R0B1 as seed ortholog is 100%.

Group of orthologs #793. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:233 P.troglodytes:224

Q5KJU9              	100.00%		H2R851              	100.00%
Bootstrap support for Q5KJU9 as seed ortholog is 100%.
Bootstrap support for H2R851 as seed ortholog is 100%.

Group of orthologs #794. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.troglodytes:179

Q5KQ20              	100.00%		H2R3Q5              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for H2R3Q5 as seed ortholog is 99%.

Group of orthologs #795. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:114

Q5KLQ6              	100.00%		H2QBP5              	100.00%
                    	       		H2Q804              	36.08%
                    	       		H2QBE0              	28.40%
                    	       		H2Q7Z2              	27.02%
                    	       		H2QQ63              	26.34%
                    	       		H2QG01              	24.97%
                    	       		H2QFZ3              	19.07%
Bootstrap support for Q5KLQ6 as seed ortholog is 99%.
Bootstrap support for H2QBP5 as seed ortholog is 99%.

Group of orthologs #796. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:67

Q5KGZ4              	100.00%		H2Q9M8              	100.00%
                    	       		H2QF84              	100.00%
Bootstrap support for Q5KGZ4 as seed ortholog is 100%.
Bootstrap support for H2Q9M8 as seed ortholog is 99%.
Bootstrap support for H2QF84 as seed ortholog is 99%.

Group of orthologs #797. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 P.troglodytes:278

Q5K6Y9              	100.00%		H2PZ82              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for H2PZ82 as seed ortholog is 100%.

Group of orthologs #798. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:278

P0CO48              	100.00%		H2R7Z3              	100.00%
Bootstrap support for P0CO48 as seed ortholog is 100%.
Bootstrap support for H2R7Z3 as seed ortholog is 100%.

Group of orthologs #799. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.troglodytes:277

Q5KIP3              	100.00%		H2Q8T2              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for H2Q8T2 as seed ortholog is 100%.

Group of orthologs #800. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.troglodytes:277

Q5K8K0              	100.00%		H2QPG1              	100.00%
Bootstrap support for Q5K8K0 as seed ortholog is 100%.
Bootstrap support for H2QPG1 as seed ortholog is 100%.

Group of orthologs #801. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.troglodytes:196

Q5KNJ6              	100.00%		H2QWX8              	100.00%
Bootstrap support for Q5KNJ6 as seed ortholog is 100%.
Bootstrap support for H2QWX8 as seed ortholog is 100%.

Group of orthologs #802. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.troglodytes:277

Q5KCP8              	100.00%		H2RAD0              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for H2RAD0 as seed ortholog is 100%.

Group of orthologs #803. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 P.troglodytes:276

Q5KPL0              	100.00%		H2QI39              	100.00%
                    	       		H2R0K2              	63.76%
Bootstrap support for Q5KPL0 as seed ortholog is 100%.
Bootstrap support for H2QI39 as seed ortholog is 100%.

Group of orthologs #804. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 P.troglodytes:276

Q5KML9              	100.00%		H2QPF9              	100.00%
                    	       		H2RA71              	57.86%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for H2QPF9 as seed ortholog is 100%.

Group of orthologs #805. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.troglodytes:207

Q5KA61              	100.00%		H2Q1Z0              	100.00%
Bootstrap support for Q5KA61 as seed ortholog is 100%.
Bootstrap support for H2Q1Z0 as seed ortholog is 100%.

Group of orthologs #806. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.troglodytes:275

P0CO52              	100.00%		H2QIS6              	100.00%
Bootstrap support for P0CO52 as seed ortholog is 100%.
Bootstrap support for H2QIS6 as seed ortholog is 100%.

Group of orthologs #807. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.troglodytes:275

Q5KFG2              	100.00%		H2Q9W6              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for H2Q9W6 as seed ortholog is 100%.

Group of orthologs #808. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.troglodytes:209

Q5KPG7              	100.00%		H2Q2T5              	100.00%
Bootstrap support for Q5KPG7 as seed ortholog is 100%.
Bootstrap support for H2Q2T5 as seed ortholog is 99%.

Group of orthologs #809. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:24

Q5KP65              	100.00%		H2QBR7              	100.00%
Bootstrap support for Q5KP65 as seed ortholog is 99%.
Bootstrap support for H2QBR7 as seed ortholog is 77%.

Group of orthologs #810. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.troglodytes:275

Q5KPE8              	100.00%		H2QDA0              	100.00%
Bootstrap support for Q5KPE8 as seed ortholog is 100%.
Bootstrap support for H2QDA0 as seed ortholog is 100%.

Group of orthologs #811. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.troglodytes:274

Q5KJZ5              	100.00%		H2QJF2              	100.00%
                    	       		H2R8D8              	29.48%
                    	       		H2QM57              	18.32%
                    	       		H2Q5K1              	18.16%
                    	       		H2QJ75              	15.96%
                    	       		H2QKD0              	9.20%
                    	       		H2QBL0              	8.18%
                    	       		H2QJY5              	6.76%
                    	       		H2QJY4              	5.58%
                    	       		H2Q961              	5.19%
Bootstrap support for Q5KJZ5 as seed ortholog is 100%.
Bootstrap support for H2QJF2 as seed ortholog is 100%.

Group of orthologs #812. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:76

Q5KDV8              	100.00%		H2QML4              	100.00%
                    	       		H2PZP2              	78.69%
                    	       		H2RH27              	52.46%
Bootstrap support for Q5KDV8 as seed ortholog is 99%.
Bootstrap support for H2QML4 as seed ortholog is 99%.

Group of orthologs #813. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.troglodytes:274

Q5KCK0              	100.00%		H2Q424              	100.00%
Bootstrap support for Q5KCK0 as seed ortholog is 100%.
Bootstrap support for H2Q424 as seed ortholog is 100%.

Group of orthologs #814. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.troglodytes:212

Q5KEL5              	100.00%		H2Q9C4              	100.00%
Q5KD15              	91.57%		
Q5K981              	56.37%		
Bootstrap support for Q5KEL5 as seed ortholog is 61%.
Alternative seed ortholog is Q5KPZ2 (11 bits away from this cluster)
Bootstrap support for H2Q9C4 as seed ortholog is 100%.

Group of orthologs #815. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.troglodytes:191

Q5KQ79              	100.00%		H2PZC7              	100.00%
                    	       		H2QY00              	30.20%
Bootstrap support for Q5KQ79 as seed ortholog is 100%.
Bootstrap support for H2PZC7 as seed ortholog is 100%.

Group of orthologs #816. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:272

Q5K9R8              	100.00%		H2PZE5              	100.00%
                    	       		H2QF73              	55.54%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for H2PZE5 as seed ortholog is 100%.

Group of orthologs #817. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:123

Q5KH15              	100.00%		H2QPG6              	100.00%
                    	       		H2Q7B8              	83.33%
Bootstrap support for Q5KH15 as seed ortholog is 100%.
Bootstrap support for H2QPG6 as seed ortholog is 99%.

Group of orthologs #818. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:272

Q5KEH0              	100.00%		H2QTR0              	100.00%
                    	       		H2Q8H7              	33.51%
Bootstrap support for Q5KEH0 as seed ortholog is 100%.
Bootstrap support for H2QTR0 as seed ortholog is 100%.

Group of orthologs #819. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:182

Q5KJK3              	100.00%		H2Q176              	100.00%
Bootstrap support for Q5KJK3 as seed ortholog is 100%.
Bootstrap support for H2Q176 as seed ortholog is 100%.

Group of orthologs #820. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.troglodytes:272

Q5KGF3              	100.00%		H2Q7U8              	100.00%
Bootstrap support for Q5KGF3 as seed ortholog is 100%.
Bootstrap support for H2Q7U8 as seed ortholog is 100%.

Group of orthologs #821. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:271

Q5KB78              	100.00%		H2QC62              	100.00%
Bootstrap support for Q5KB78 as seed ortholog is 99%.
Bootstrap support for H2QC62 as seed ortholog is 100%.

Group of orthologs #822. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:115

Q5KKF5              	100.00%		H2RD50              	100.00%
Bootstrap support for Q5KKF5 as seed ortholog is 99%.
Bootstrap support for H2RD50 as seed ortholog is 99%.

Group of orthologs #823. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.troglodytes:270

Q5KBH5              	100.00%		H2Q2A6              	100.00%
Bootstrap support for Q5KBH5 as seed ortholog is 100%.
Bootstrap support for H2Q2A6 as seed ortholog is 100%.

Group of orthologs #824. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.troglodytes:270

Q5KD80              	100.00%		H2Q8D7              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for H2Q8D7 as seed ortholog is 100%.

Group of orthologs #825. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.troglodytes:270

Q5K9E9              	100.00%		H2QNM5              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for H2QNM5 as seed ortholog is 100%.

Group of orthologs #826. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.troglodytes:270

Q5KAP5              	100.00%		H2R0M9              	100.00%
Bootstrap support for Q5KAP5 as seed ortholog is 100%.
Bootstrap support for H2R0M9 as seed ortholog is 100%.

Group of orthologs #827. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.troglodytes:270

Q5KKJ4              	100.00%		H2QRW8              	100.00%
Bootstrap support for Q5KKJ4 as seed ortholog is 100%.
Bootstrap support for H2QRW8 as seed ortholog is 100%.

Group of orthologs #828. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.troglodytes:269

Q5K936              	100.00%		H2R4J9              	100.00%
                    	       		H2R981              	33.05%
Bootstrap support for Q5K936 as seed ortholog is 100%.
Bootstrap support for H2R4J9 as seed ortholog is 100%.

Group of orthologs #829. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.troglodytes:170

Q5K7V7              	100.00%		H2QAC7              	100.00%
Bootstrap support for Q5K7V7 as seed ortholog is 100%.
Bootstrap support for H2QAC7 as seed ortholog is 99%.

Group of orthologs #830. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.troglodytes:269

Q5KFQ7              	100.00%		H2Q4R5              	100.00%
Bootstrap support for Q5KFQ7 as seed ortholog is 100%.
Bootstrap support for H2Q4R5 as seed ortholog is 100%.

Group of orthologs #831. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.troglodytes:269

Q5KAQ7              	100.00%		H2QK87              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for H2QK87 as seed ortholog is 100%.

Group of orthologs #832. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 P.troglodytes:268

Q5KC89              	100.00%		H2QLS6              	100.00%
                    	       		H2QAJ6              	27.00%
Bootstrap support for Q5KC89 as seed ortholog is 100%.
Bootstrap support for H2QLS6 as seed ortholog is 100%.

Group of orthologs #833. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 P.troglodytes:83

Q5KLG9              	100.00%		H2QV38              	100.00%
                    	       		H2R190              	100.00%
Bootstrap support for Q5KLG9 as seed ortholog is 100%.
Bootstrap support for H2QV38 as seed ortholog is 93%.
Bootstrap support for H2R190 as seed ortholog is 95%.

Group of orthologs #834. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:122

P0CO42              	100.00%		H2PYL4              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 99%.
Bootstrap support for H2PYL4 as seed ortholog is 99%.

Group of orthologs #835. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 P.troglodytes:268

P0CP80              	100.00%		H2QQC9              	100.00%
Bootstrap support for P0CP80 as seed ortholog is 100%.
Bootstrap support for H2QQC9 as seed ortholog is 100%.

Group of orthologs #836. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.troglodytes:267

Q5KL48              	100.00%		H2QYK1              	100.00%
                    	       		H2QLX7              	10.92%
Bootstrap support for Q5KL48 as seed ortholog is 100%.
Bootstrap support for H2QYK1 as seed ortholog is 100%.

Group of orthologs #837. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.troglodytes:267

P0CR74              	100.00%		H2Q3N7              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for H2Q3N7 as seed ortholog is 100%.

Group of orthologs #838. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:267

P0CQ02              	100.00%		H2R667              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 99%.
Bootstrap support for H2R667 as seed ortholog is 100%.

Group of orthologs #839. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.troglodytes:69

Q5KQ59              	100.00%		H2QYF0              	100.00%
Q5KAY9              	64.11%		H2QIZ6              	52.77%
                    	       		H2QDE4              	51.04%
                    	       		G2HER8              	44.46%
Bootstrap support for Q5KQ59 as seed ortholog is 100%.
Bootstrap support for H2QYF0 as seed ortholog is 95%.

Group of orthologs #840. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.troglodytes:266

Q5KCD5              	100.00%		H2Q990              	100.00%
Bootstrap support for Q5KCD5 as seed ortholog is 100%.
Bootstrap support for H2Q990 as seed ortholog is 100%.

Group of orthologs #841. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.troglodytes:109

Q5KEY2              	100.00%		H2QCF9              	100.00%
                    	       		H2QYP4              	53.48%
Bootstrap support for Q5KEY2 as seed ortholog is 100%.
Bootstrap support for H2QCF9 as seed ortholog is 98%.

Group of orthologs #842. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.troglodytes:265

Q5KCL1              	100.00%		H2R278              	100.00%
                    	       		H2Q205              	30.28%
Bootstrap support for Q5KCL1 as seed ortholog is 100%.
Bootstrap support for H2R278 as seed ortholog is 100%.

Group of orthologs #843. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:84

Q5K9W3              	100.00%		A5A6I0              	100.00%
Bootstrap support for Q5K9W3 as seed ortholog is 99%.
Bootstrap support for A5A6I0 as seed ortholog is 99%.

Group of orthologs #844. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.troglodytes:265

Q5K7P6              	100.00%		H2Q7J5              	100.00%
Bootstrap support for Q5K7P6 as seed ortholog is 100%.
Bootstrap support for H2Q7J5 as seed ortholog is 100%.

Group of orthologs #845. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.troglodytes:265

Q5KBV2              	100.00%		H2R4Q5              	100.00%
Bootstrap support for Q5KBV2 as seed ortholog is 100%.
Bootstrap support for H2R4Q5 as seed ortholog is 100%.

Group of orthologs #846. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:138

Q5K9I3              	100.00%		H2QKC7              	100.00%
Bootstrap support for Q5K9I3 as seed ortholog is 100%.
Bootstrap support for H2QKC7 as seed ortholog is 99%.

Group of orthologs #847. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.troglodytes:56

Q5KCH7              	100.00%		H2QM08              	100.00%
                    	       		H2Q1M3              	56.74%
                    	       		H2Q120              	37.22%
                    	       		H2QZ96              	25.55%
                    	       		H2QMM7              	8.85%
Bootstrap support for Q5KCH7 as seed ortholog is 75%.
Bootstrap support for H2QM08 as seed ortholog is 94%.

Group of orthologs #848. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.troglodytes:263

Q5KC15              	100.00%		H2PY94              	100.00%
Bootstrap support for Q5KC15 as seed ortholog is 100%.
Bootstrap support for H2PY94 as seed ortholog is 100%.

Group of orthologs #849. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.troglodytes:263

Q5KIM1              	100.00%		H2Q965              	100.00%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for H2Q965 as seed ortholog is 100%.

Group of orthologs #850. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.troglodytes:263

Q5KL73              	100.00%		H2QHR6              	100.00%
Bootstrap support for Q5KL73 as seed ortholog is 100%.
Bootstrap support for H2QHR6 as seed ortholog is 100%.

Group of orthologs #851. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.troglodytes:263

Q5KGH4              	100.00%		H2R3Z6              	100.00%
Bootstrap support for Q5KGH4 as seed ortholog is 100%.
Bootstrap support for H2R3Z6 as seed ortholog is 100%.

Group of orthologs #852. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.troglodytes:263

Q5KG36              	100.00%		P60175              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for P60175 as seed ortholog is 100%.

Group of orthologs #853. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.troglodytes:154

Q5KBQ7              	100.00%		H2Q1R4              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for H2Q1R4 as seed ortholog is 99%.

Group of orthologs #854. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.troglodytes:262

Q5KPW7              	100.00%		H2QJZ3              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for H2QJZ3 as seed ortholog is 100%.

Group of orthologs #855. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:156

Q5KNZ3              	100.00%		H2QMK3              	100.00%
Bootstrap support for Q5KNZ3 as seed ortholog is 99%.
Bootstrap support for H2QMK3 as seed ortholog is 99%.

Group of orthologs #856. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 P.troglodytes:261

Q5KE84              	100.00%		G2HE47              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for G2HE47 as seed ortholog is 100%.

Group of orthologs #857. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.troglodytes:61

Q5KPT5              	100.00%		H2Q3C0              	100.00%
Bootstrap support for Q5KPT5 as seed ortholog is 93%.
Bootstrap support for H2Q3C0 as seed ortholog is 93%.

Group of orthologs #858. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 P.troglodytes:184

Q5K8A5              	100.00%		H2R517              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for H2R517 as seed ortholog is 99%.

Group of orthologs #859. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:260

Q5KFI9              	100.00%		H2QQF3              	100.00%
Bootstrap support for Q5KFI9 as seed ortholog is 90%.
Bootstrap support for H2QQF3 as seed ortholog is 100%.

Group of orthologs #860. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:216

Q5K7Y4              	100.00%		H2R8U6              	100.00%
Bootstrap support for Q5K7Y4 as seed ortholog is 99%.
Bootstrap support for H2R8U6 as seed ortholog is 100%.

Group of orthologs #861. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:45

Q5K810              	100.00%		H2RE59              	100.00%
Bootstrap support for Q5K810 as seed ortholog is 100%.
Bootstrap support for H2RE59 as seed ortholog is 96%.

Group of orthologs #862. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:259

Q5K8Q5              	100.00%		H2QGR1              	100.00%
                    	       		H2QLN5              	39.53%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for H2QGR1 as seed ortholog is 100%.

Group of orthologs #863. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:163

Q5KLY0              	100.00%		H2R420              	100.00%
                    	       		H2QW32              	83.13%
Bootstrap support for Q5KLY0 as seed ortholog is 100%.
Bootstrap support for H2R420 as seed ortholog is 99%.

Group of orthologs #864. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:185

Q5KDE0              	100.00%		H2QG94              	100.00%
Bootstrap support for Q5KDE0 as seed ortholog is 100%.
Bootstrap support for H2QG94 as seed ortholog is 100%.

Group of orthologs #865. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:259

Q5K890              	100.00%		H2QN92              	100.00%
Bootstrap support for Q5K890 as seed ortholog is 100%.
Bootstrap support for H2QN92 as seed ortholog is 100%.

Group of orthologs #866. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:199

Q5KJ01              	100.00%		H2QKK8              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for H2QKK8 as seed ortholog is 100%.

Group of orthologs #867. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:73

Q5KFC1              	100.00%		H2QST6              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 100%.
Bootstrap support for H2QST6 as seed ortholog is 67%.
Alternative seed ortholog is H2QB76 (73 bits away from this cluster)

Group of orthologs #868. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:259

Q5KJC9              	100.00%		H2QZG4              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for H2QZG4 as seed ortholog is 100%.

Group of orthologs #869. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.troglodytes:259

Q5KPM6              	100.00%		H2QV80              	100.00%
Bootstrap support for Q5KPM6 as seed ortholog is 100%.
Bootstrap support for H2QV80 as seed ortholog is 100%.

Group of orthologs #870. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:56

Q5KK41              	100.00%		G2HFP6              	100.00%
                    	       		H2RF85              	18.99%
                    	       		H2QHK2              	12.66%
                    	       		H2Q047              	5.06%
Bootstrap support for Q5KK41 as seed ortholog is 100%.
Bootstrap support for G2HFP6 as seed ortholog is 99%.

Group of orthologs #871. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:119

Q5K9K6              	100.00%		H2Q4R3              	100.00%
                    	       		H2QL37              	18.04%
                    	       		H2R4Y2              	10.63%
Bootstrap support for Q5K9K6 as seed ortholog is 99%.
Bootstrap support for H2Q4R3 as seed ortholog is 99%.

Group of orthologs #872. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.troglodytes:258

Q5KG91              	100.00%		H2Q6I3              	100.00%
                    	       		H2Q6I4              	43.81%
Bootstrap support for Q5KG91 as seed ortholog is 100%.
Bootstrap support for H2Q6I3 as seed ortholog is 100%.

Group of orthologs #873. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.troglodytes:182

Q5KM42              	100.00%		H2QBY8              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 100%.
Bootstrap support for H2QBY8 as seed ortholog is 100%.

Group of orthologs #874. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.troglodytes:257

Q5K8A1              	100.00%		H2PZJ4              	100.00%
                    	       		H2R6A8              	29.18%
                    	       		H2QF68              	25.99%
Bootstrap support for Q5K8A1 as seed ortholog is 100%.
Bootstrap support for H2PZJ4 as seed ortholog is 100%.

Group of orthologs #875. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.troglodytes:257

P0CO82              	100.00%		H2QMM9              	100.00%
                    	       		H2QBJ6              	14.45%
Bootstrap support for P0CO82 as seed ortholog is 100%.
Bootstrap support for H2QMM9 as seed ortholog is 100%.

Group of orthologs #876. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.troglodytes:257

Q5K7J8              	100.00%		H2PYY9              	100.00%
Bootstrap support for Q5K7J8 as seed ortholog is 77%.
Bootstrap support for H2PYY9 as seed ortholog is 100%.

Group of orthologs #877. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.troglodytes:257

Q5KKR0              	100.00%		H2Q8Y7              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for H2Q8Y7 as seed ortholog is 100%.

Group of orthologs #878. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.troglodytes:64

Q5K7E1              	100.00%		H2QVC5              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for H2QVC5 as seed ortholog is 85%.

Group of orthologs #879. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.troglodytes:257

Q5K737              	100.00%		H2QW76              	100.00%
Bootstrap support for Q5K737 as seed ortholog is 100%.
Bootstrap support for H2QW76 as seed ortholog is 100%.

Group of orthologs #880. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:256

Q5KNJ8              	100.00%		H2Q174              	100.00%
                    	       		H2Q8X2              	52.09%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for H2Q174 as seed ortholog is 100%.

Group of orthologs #881. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:50

Q5KF72              	100.00%		H2QRL6              	100.00%
                    	       		H2Q1X5              	54.24%
Bootstrap support for Q5KF72 as seed ortholog is 100%.
Bootstrap support for H2QRL6 as seed ortholog is 99%.

Group of orthologs #882. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:256

Q5KDH9              	100.00%		H2R1J8              	100.00%
                    	       		H2Q8B5              	49.22%
Bootstrap support for Q5KDH9 as seed ortholog is 100%.
Bootstrap support for H2R1J8 as seed ortholog is 100%.

Group of orthologs #883. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:256

Q5KA78              	100.00%		H2Q8Q2              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 91%.
Bootstrap support for H2Q8Q2 as seed ortholog is 100%.

Group of orthologs #884. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:256

Q5KH08              	100.00%		H2QQR2              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for H2QQR2 as seed ortholog is 100%.

Group of orthologs #885. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.troglodytes:256

Q5KIF8              	100.00%		H2QTK2              	100.00%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for H2QTK2 as seed ortholog is 100%.

Group of orthologs #886. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.troglodytes:255

Q5KAJ1              	100.00%		H2QS60              	100.00%
                    	       		H2QQ74              	42.47%
                    	       		H2QYZ1              	21.48%
Bootstrap support for Q5KAJ1 as seed ortholog is 100%.
Bootstrap support for H2QS60 as seed ortholog is 100%.

Group of orthologs #887. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.troglodytes:255

P0CM40              	100.00%		H2R2P4              	100.00%
                    	       		H2R4V3              	27.20%
Bootstrap support for P0CM40 as seed ortholog is 100%.
Bootstrap support for H2R2P4 as seed ortholog is 100%.

Group of orthologs #888. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.troglodytes:255

P0CN40              	100.00%		H2QFI8              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for H2QFI8 as seed ortholog is 100%.

Group of orthologs #889. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.troglodytes:37

Q5KMM7              	100.00%		H2QIB1              	100.00%
Bootstrap support for Q5KMM7 as seed ortholog is 100%.
Bootstrap support for H2QIB1 as seed ortholog is 76%.

Group of orthologs #890. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.troglodytes:255

Q5KLK7              	100.00%		H2RBI2              	100.00%
Bootstrap support for Q5KLK7 as seed ortholog is 100%.
Bootstrap support for H2RBI2 as seed ortholog is 100%.

Group of orthologs #891. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 P.troglodytes:254

Q5KJB8              	100.00%		Q0MQI9              	100.00%
                    	       		H2RBN7              	90.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for Q0MQI9 as seed ortholog is 100%.

Group of orthologs #892. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 P.troglodytes:254

Q5K9K4              	100.00%		H2QJ41              	100.00%
Bootstrap support for Q5K9K4 as seed ortholog is 100%.
Bootstrap support for H2QJ41 as seed ortholog is 100%.

Group of orthologs #893. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:60

Q5KAK1              	100.00%		H2QRW4              	100.00%
                    	       		H2QPF3              	23.66%
                    	       		H2RHR8              	15.67%
Bootstrap support for Q5KAK1 as seed ortholog is 99%.
Bootstrap support for H2QRW4 as seed ortholog is 96%.

Group of orthologs #894. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.troglodytes:253

Q5KEX2              	100.00%		H2R0E8              	100.00%
                    	       		H2R7D5              	44.22%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for H2R0E8 as seed ortholog is 100%.

Group of orthologs #895. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.troglodytes:253

Q5KDJ7              	100.00%		H2PYW3              	100.00%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for H2PYW3 as seed ortholog is 100%.

Group of orthologs #896. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.troglodytes:253

P0CP30              	100.00%		H2QE26              	100.00%
Bootstrap support for P0CP30 as seed ortholog is 100%.
Bootstrap support for H2QE26 as seed ortholog is 100%.

Group of orthologs #897. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.troglodytes:253

Q5K8G6              	100.00%		Q0MQI3              	100.00%
Bootstrap support for Q5K8G6 as seed ortholog is 100%.
Bootstrap support for Q0MQI3 as seed ortholog is 100%.

Group of orthologs #898. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:152

P0CR30              	100.00%		H2QRI1              	100.00%
                    	       		H2Q211              	80.67%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for H2QRI1 as seed ortholog is 100%.

Group of orthologs #899. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:98

Q5KJK0              	100.00%		H2QHV8              	100.00%
                    	       		H2Q1K5              	24.44%
Bootstrap support for Q5KJK0 as seed ortholog is 100%.
Bootstrap support for H2QHV8 as seed ortholog is 100%.

Group of orthologs #900. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.troglodytes:252

Q5KDI9              	100.00%		H2Q0G1              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for H2Q0G1 as seed ortholog is 100%.

Group of orthologs #901. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.troglodytes:119

Q5KK51              	100.00%		H2Q155              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for H2Q155 as seed ortholog is 70%.
Alternative seed ortholog is H2Q133 (119 bits away from this cluster)

Group of orthologs #902. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.troglodytes:252

Q5K902              	100.00%		H2QMB2              	100.00%
Bootstrap support for Q5K902 as seed ortholog is 100%.
Bootstrap support for H2QMB2 as seed ortholog is 100%.

Group of orthologs #903. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.troglodytes:252

Q5KFT0              	100.00%		H2QRT3              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for H2QRT3 as seed ortholog is 100%.

Group of orthologs #904. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:113

P0CP78              	100.00%		H2Q9K6              	100.00%
                    	       		H2QRE2              	15.68%
Bootstrap support for P0CP78 as seed ortholog is 99%.
Bootstrap support for H2Q9K6 as seed ortholog is 99%.

Group of orthologs #905. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:109

P0CP82              	100.00%		H2PYT6              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 99%.
Bootstrap support for H2PYT6 as seed ortholog is 99%.

Group of orthologs #906. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 P.troglodytes:251

Q5KBS3              	100.00%		Q8HXP7              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for Q8HXP7 as seed ortholog is 100%.

Group of orthologs #907. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.troglodytes:250

Q5KQ30              	100.00%		H2R1Z1              	100.00%
Bootstrap support for Q5KQ30 as seed ortholog is 100%.
Bootstrap support for H2R1Z1 as seed ortholog is 100%.

Group of orthologs #908. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.troglodytes:250

Q5KF23              	100.00%		Q0MQG8              	100.00%
Bootstrap support for Q5KF23 as seed ortholog is 100%.
Bootstrap support for Q0MQG8 as seed ortholog is 100%.

Group of orthologs #909. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.troglodytes:249

Q5KLE7              	100.00%		H2Q378              	100.00%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for H2Q378 as seed ortholog is 100%.

Group of orthologs #910. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:26 P.troglodytes:148

Q5K7E4              	100.00%		H2QHU4              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 66%.
Alternative seed ortholog is Q5KFT6 (26 bits away from this cluster)
Bootstrap support for H2QHU4 as seed ortholog is 99%.

Group of orthologs #911. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 P.troglodytes:163

P0CS32              	100.00%		H2REW6              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for H2REW6 as seed ortholog is 100%.

Group of orthologs #912. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.troglodytes:247

Q5KKT3              	100.00%		H2QN04              	100.00%
Bootstrap support for Q5KKT3 as seed ortholog is 100%.
Bootstrap support for H2QN04 as seed ortholog is 100%.

Group of orthologs #913. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.troglodytes:246

Q5KMB5              	100.00%		H2Q5C3              	100.00%
                    	       		H2QNS8              	14.11%
Bootstrap support for Q5KMB5 as seed ortholog is 91%.
Bootstrap support for H2Q5C3 as seed ortholog is 100%.

Group of orthologs #914. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.troglodytes:199

Q5KCK7              	100.00%		H2PZK3              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for H2PZK3 as seed ortholog is 100%.

Group of orthologs #915. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.troglodytes:246

Q5KLE6              	100.00%		G2HH83              	100.00%
Bootstrap support for Q5KLE6 as seed ortholog is 100%.
Bootstrap support for G2HH83 as seed ortholog is 100%.

Group of orthologs #916. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.troglodytes:246

P0CM46              	100.00%		H2QM96              	100.00%
Bootstrap support for P0CM46 as seed ortholog is 100%.
Bootstrap support for H2QM96 as seed ortholog is 100%.

Group of orthologs #917. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.troglodytes:246

Q5KHA2              	100.00%		H2QK76              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for H2QK76 as seed ortholog is 100%.

Group of orthologs #918. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:141

P0CO04              	100.00%		G2HIR8              	100.00%
Q5KMT3              	100.00%		H2R5Q1              	100.00%
                    	       		H2QSJ2              	91.30%
Bootstrap support for P0CO04 as seed ortholog is 100%.
Bootstrap support for Q5KMT3 as seed ortholog is 99%.
Bootstrap support for G2HIR8 as seed ortholog is 100%.
Bootstrap support for H2R5Q1 as seed ortholog is 100%.

Group of orthologs #919. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 P.troglodytes:245

Q5KGF9              	100.00%		H2Q8L8              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for H2Q8L8 as seed ortholog is 100%.

Group of orthologs #920. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 P.troglodytes:245

Q5KFZ1              	100.00%		Q9GL72              	100.00%
Bootstrap support for Q5KFZ1 as seed ortholog is 100%.
Bootstrap support for Q9GL72 as seed ortholog is 100%.

Group of orthologs #921. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:105

Q5KCQ7              	100.00%		H2QI57              	100.00%
                    	       		H2RCF2              	88.12%
Bootstrap support for Q5KCQ7 as seed ortholog is 99%.
Bootstrap support for H2QI57 as seed ortholog is 99%.

Group of orthologs #922. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.troglodytes:244

Q5KAQ6              	100.00%		H2RCA5              	100.00%
                    	       		H2Q7E5              	66.04%
Bootstrap support for Q5KAQ6 as seed ortholog is 100%.
Bootstrap support for H2RCA5 as seed ortholog is 100%.

Group of orthologs #923. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.troglodytes:244

Q5KBP2              	100.00%		H2Q8F0              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for H2Q8F0 as seed ortholog is 100%.

Group of orthologs #924. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.troglodytes:107

Q5KN42              	100.00%		H2Q6X9              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for H2Q6X9 as seed ortholog is 99%.

Group of orthologs #925. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.troglodytes:176

Q5KIB2              	100.00%		H2QJR3              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for H2QJR3 as seed ortholog is 100%.

Group of orthologs #926. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.troglodytes:244

P0CM14              	100.00%		H2RCT5              	100.00%
Bootstrap support for P0CM14 as seed ortholog is 100%.
Bootstrap support for H2RCT5 as seed ortholog is 100%.

Group of orthologs #927. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.troglodytes:243

Q5KJD1              	100.00%		H2QF50              	100.00%
                    	       		H2R699              	56.34%
                    	       		H2R1R3              	52.51%
                    	       		H2QF49              	18.44%
Bootstrap support for Q5KJD1 as seed ortholog is 99%.
Bootstrap support for H2QF50 as seed ortholog is 100%.

Group of orthologs #928. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.troglodytes:243

P0CS66              	100.00%		H2Q6I7              	100.00%
                    	       		H2R5I8              	34.51%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for H2Q6I7 as seed ortholog is 100%.

Group of orthologs #929. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.troglodytes:243

Q5KJN6              	100.00%		G2HIU8              	100.00%
                    	       		H2QBD4              	53.36%
Bootstrap support for Q5KJN6 as seed ortholog is 100%.
Bootstrap support for G2HIU8 as seed ortholog is 100%.

Group of orthologs #930. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:53

P0CS76              	100.00%		H2QTK0              	100.00%
                    	       		H2Q7B5              	67.35%
Bootstrap support for P0CS76 as seed ortholog is 99%.
Bootstrap support for H2QTK0 as seed ortholog is 90%.

Group of orthologs #931. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.troglodytes:243

Q5KMR3              	100.00%		G2HH55              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for G2HH55 as seed ortholog is 100%.

Group of orthologs #932. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:145

Q5KHD3              	100.00%		H2QVW5              	100.00%
                    	       		H2Q2E6              	40.32%
Bootstrap support for Q5KHD3 as seed ortholog is 99%.
Bootstrap support for H2QVW5 as seed ortholog is 99%.

Group of orthologs #933. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.troglodytes:242

Q5KA10              	100.00%		H2QIY3              	100.00%
Bootstrap support for Q5KA10 as seed ortholog is 100%.
Bootstrap support for H2QIY3 as seed ortholog is 100%.

Group of orthologs #934. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.troglodytes:242

Q5K9I2              	100.00%		H2R146              	100.00%
Bootstrap support for Q5K9I2 as seed ortholog is 100%.
Bootstrap support for H2R146 as seed ortholog is 100%.

Group of orthologs #935. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.troglodytes:242

Q5KNG3              	100.00%		H2QPA0              	100.00%
Bootstrap support for Q5KNG3 as seed ortholog is 100%.
Bootstrap support for H2QPA0 as seed ortholog is 100%.

Group of orthologs #936. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:161

Q5KBI5              	100.00%		H2QQ04              	100.00%
Bootstrap support for Q5KBI5 as seed ortholog is 98%.
Bootstrap support for H2QQ04 as seed ortholog is 100%.

Group of orthologs #937. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.troglodytes:196

Q5K974              	100.00%		H2PZZ0              	100.00%
Bootstrap support for Q5K974 as seed ortholog is 100%.
Bootstrap support for H2PZZ0 as seed ortholog is 100%.

Group of orthologs #938. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.troglodytes:240

Q5KND4              	100.00%		G2HEG8              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for G2HEG8 as seed ortholog is 100%.

Group of orthologs #939. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.troglodytes:131

Q5KCK9              	100.00%		H2QHC5              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for H2QHC5 as seed ortholog is 100%.

Group of orthologs #940. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.troglodytes:240

Q5KK45              	100.00%		H2QYG7              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for H2QYG7 as seed ortholog is 100%.

Group of orthologs #941. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.troglodytes:240

Q5KI18              	100.00%		H2R8F3              	100.00%
Bootstrap support for Q5KI18 as seed ortholog is 100%.
Bootstrap support for H2R8F3 as seed ortholog is 100%.

Group of orthologs #942. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:122

P0CS16              	100.00%		H2QZ18              	100.00%
                    	       		H2R5C5              	81.82%
Bootstrap support for P0CS16 as seed ortholog is 100%.
Bootstrap support for H2QZ18 as seed ortholog is 100%.

Group of orthologs #943. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:238

Q5KGT7              	100.00%		H2Q6Y2              	100.00%
Q5K9Z3              	37.23%		H2Q6Y1              	36.60%
Bootstrap support for Q5KGT7 as seed ortholog is 99%.
Bootstrap support for H2Q6Y2 as seed ortholog is 100%.

Group of orthologs #944. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:26

P0CQ42              	100.00%		H2Q376              	100.00%
                    	       		H2QGV8              	13.71%
Bootstrap support for P0CQ42 as seed ortholog is 99%.
Bootstrap support for H2Q376 as seed ortholog is 90%.

Group of orthologs #945. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.troglodytes:238

Q5KB12              	100.00%		H2Q0Q1              	100.00%
Bootstrap support for Q5KB12 as seed ortholog is 100%.
Bootstrap support for H2Q0Q1 as seed ortholog is 100%.

Group of orthologs #946. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:63

Q5KBE3              	100.00%		H2Q134              	100.00%
Bootstrap support for Q5KBE3 as seed ortholog is 99%.
Bootstrap support for H2Q134 as seed ortholog is 93%.

Group of orthologs #947. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.troglodytes:238

Q5KBW9              	100.00%		H2QCU0              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for H2QCU0 as seed ortholog is 100%.

Group of orthologs #948. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.troglodytes:238

Q5KL66              	100.00%		H2Q8H3              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for H2Q8H3 as seed ortholog is 100%.

Group of orthologs #949. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.troglodytes:192

Q5KIE9              	100.00%		H2R2J5              	100.00%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for H2R2J5 as seed ortholog is 99%.

Group of orthologs #950. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.troglodytes:238

Q5KL20              	100.00%		H2R0Y5              	100.00%
Bootstrap support for Q5KL20 as seed ortholog is 100%.
Bootstrap support for H2R0Y5 as seed ortholog is 100%.

Group of orthologs #951. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 P.troglodytes:237

Q5KNH3              	100.00%		H2QBS2              	100.00%
Bootstrap support for Q5KNH3 as seed ortholog is 100%.
Bootstrap support for H2QBS2 as seed ortholog is 100%.

Group of orthologs #952. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.troglodytes:236

Q5KEB2              	100.00%		H2R9Q9              	100.00%
                    	       		H2QD42              	57.50%
                    	       		H2R2M5              	21.47%
Bootstrap support for Q5KEB2 as seed ortholog is 100%.
Bootstrap support for H2R9Q9 as seed ortholog is 100%.

Group of orthologs #953. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.troglodytes:236

P0CS14              	100.00%		H2PY38              	100.00%
Bootstrap support for P0CS14 as seed ortholog is 100%.
Bootstrap support for H2PY38 as seed ortholog is 100%.

Group of orthologs #954. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.troglodytes:140

Q5KEK2              	100.00%		H2PYI7              	100.00%
Bootstrap support for Q5KEK2 as seed ortholog is 99%.
Bootstrap support for H2PYI7 as seed ortholog is 99%.

Group of orthologs #955. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.troglodytes:236

Q5KFT1              	100.00%		H2Q908              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for H2Q908 as seed ortholog is 100%.

Group of orthologs #956. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.troglodytes:235

Q5KBT6              	100.00%		H2Q4C7              	100.00%
                    	       		H2QG40              	48.34%
Bootstrap support for Q5KBT6 as seed ortholog is 100%.
Bootstrap support for H2Q4C7 as seed ortholog is 100%.

Group of orthologs #957. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.troglodytes:235

Q5KP63              	100.00%		H2Q3V7              	100.00%
                    	       		H2RH61              	24.64%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for H2Q3V7 as seed ortholog is 100%.

Group of orthologs #958. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.troglodytes:235

Q5KCD9              	100.00%		H2QXD5              	100.00%
Bootstrap support for Q5KCD9 as seed ortholog is 100%.
Bootstrap support for H2QXD5 as seed ortholog is 100%.

Group of orthologs #959. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:112

Q5KGY4              	100.00%		H2R457              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 98%.
Bootstrap support for H2R457 as seed ortholog is 99%.

Group of orthologs #960. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.troglodytes:235

Q5KJR4              	100.00%		H2R1U8              	100.00%
Bootstrap support for Q5KJR4 as seed ortholog is 100%.
Bootstrap support for H2R1U8 as seed ortholog is 100%.

Group of orthologs #961. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.troglodytes:234

Q5KBE8              	100.00%		H2Q0Z9              	100.00%
Q5KPG2              	57.35%		
Q5KLQ1              	12.93%		
Q5KE59              	9.07%		
Q5K8B7              	5.94%		
Bootstrap support for Q5KBE8 as seed ortholog is 100%.
Bootstrap support for H2Q0Z9 as seed ortholog is 100%.

Group of orthologs #962. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.troglodytes:234

Q5KG94              	100.00%		H2QJE2              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for H2QJE2 as seed ortholog is 100%.

Group of orthologs #963. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.troglodytes:234

Q5K9U5              	100.00%		H2R4E3              	100.00%
Bootstrap support for Q5K9U5 as seed ortholog is 100%.
Bootstrap support for H2R4E3 as seed ortholog is 100%.

Group of orthologs #964. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 P.troglodytes:233

Q5KEB3              	100.00%		H2QFG9              	100.00%
                    	       		H2PYX4              	57.23%
                    	       		H2Q2N6              	20.23%
Bootstrap support for Q5KEB3 as seed ortholog is 100%.
Bootstrap support for H2QFG9 as seed ortholog is 100%.

Group of orthologs #965. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:232

Q5KH94              	100.00%		H2PYX5              	100.00%
Q5KI95              	46.31%		H2QVE6              	22.55%
                    	       		H2QVE7              	18.45%
                    	       		H2RD68              	10.48%
                    	       		H2QVG1              	8.88%
                    	       		H2Q1J9              	7.52%
                    	       		H2Q1J8              	6.38%
                    	       		H2Q1K0              	5.69%
Bootstrap support for Q5KH94 as seed ortholog is 96%.
Bootstrap support for H2PYX5 as seed ortholog is 100%.

Group of orthologs #966. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.troglodytes:232

Q5KNZ4              	100.00%		H2R046              	100.00%
                    	       		H2R3T7              	30.33%
Bootstrap support for Q5KNZ4 as seed ortholog is 100%.
Bootstrap support for H2R046 as seed ortholog is 100%.

Group of orthologs #967. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.troglodytes:232

Q5K6V6              	100.00%		H2Q247              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for H2Q247 as seed ortholog is 100%.

Group of orthologs #968. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.troglodytes:232

Q5KKH6              	100.00%		G2HGL9              	100.00%
Bootstrap support for Q5KKH6 as seed ortholog is 100%.
Bootstrap support for G2HGL9 as seed ortholog is 100%.

Group of orthologs #969. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.troglodytes:232

P0CO46              	100.00%		H2QI04              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for H2QI04 as seed ortholog is 100%.

Group of orthologs #970. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.troglodytes:181

P40909              	100.00%		H2RFH8              	100.00%
Bootstrap support for P40909 as seed ortholog is 100%.
Bootstrap support for H2RFH8 as seed ortholog is 100%.

Group of orthologs #971. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.troglodytes:231

Q5KQ44              	100.00%		H2QRQ5              	100.00%
Q5KPV8              	45.05%		
Bootstrap support for Q5KQ44 as seed ortholog is 100%.
Bootstrap support for H2QRQ5 as seed ortholog is 100%.

Group of orthologs #972. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.troglodytes:231

Q5K726              	100.00%		H2QF44              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for H2QF44 as seed ortholog is 100%.

Group of orthologs #973. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.troglodytes:231

Q5KK42              	100.00%		H2QB59              	100.00%
Bootstrap support for Q5KK42 as seed ortholog is 100%.
Bootstrap support for H2QB59 as seed ortholog is 100%.

Group of orthologs #974. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.troglodytes:231

Q5KPS5              	100.00%		H2RBF6              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for H2RBF6 as seed ortholog is 100%.

Group of orthologs #975. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.troglodytes:129

Q5KHU8              	100.00%		H2QZV4              	100.00%
                    	       		H2R1C4              	60.37%
Bootstrap support for Q5KHU8 as seed ortholog is 100%.
Bootstrap support for H2QZV4 as seed ortholog is 99%.

Group of orthologs #976. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.troglodytes:230

Q5K760              	100.00%		H2R3N5              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for H2R3N5 as seed ortholog is 100%.

Group of orthologs #977. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.troglodytes:230

Q5KPS6              	100.00%		H2QP35              	100.00%
Bootstrap support for Q5KPS6 as seed ortholog is 100%.
Bootstrap support for H2QP35 as seed ortholog is 100%.

Group of orthologs #978. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.troglodytes:230

Q5K7F0              	100.00%		H2R8B4              	100.00%
Bootstrap support for Q5K7F0 as seed ortholog is 100%.
Bootstrap support for H2R8B4 as seed ortholog is 100%.

Group of orthologs #979. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:103

Q5KKS0              	100.00%		H2R2N0              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 96%.
Bootstrap support for H2R2N0 as seed ortholog is 99%.

Group of orthologs #980. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.troglodytes:117

Q5KLH7              	100.00%		H2PYY0              	100.00%
                    	       		H2QFH2              	55.18%
                    	       		H2QFS5              	45.51%
Bootstrap support for Q5KLH7 as seed ortholog is 100%.
Bootstrap support for H2PYY0 as seed ortholog is 99%.

Group of orthologs #981. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.troglodytes:229

Q5K9C7              	100.00%		H2QYH9              	100.00%
                    	       		Q6B4Z3              	54.01%
                    	       		H2RGZ4              	20.74%
Bootstrap support for Q5K9C7 as seed ortholog is 100%.
Bootstrap support for H2QYH9 as seed ortholog is 100%.

Group of orthologs #982. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.troglodytes:70

P0CS28              	100.00%		H2QU47              	100.00%
                    	       		H2QDR0              	36.99%
Bootstrap support for P0CS28 as seed ortholog is 100%.
Bootstrap support for H2QU47 as seed ortholog is 94%.

Group of orthologs #983. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.troglodytes:229

Q5KA21              	100.00%		H2Q3X4              	100.00%
Bootstrap support for Q5KA21 as seed ortholog is 100%.
Bootstrap support for H2Q3X4 as seed ortholog is 100%.

Group of orthologs #984. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:229

Q5KHX7              	100.00%		H2QTH5              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 99%.
Bootstrap support for H2QTH5 as seed ortholog is 100%.

Group of orthologs #985. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.troglodytes:228

Q5KMB8              	100.00%		H2QX08              	100.00%
                    	       		H2R935              	31.94%
Bootstrap support for Q5KMB8 as seed ortholog is 100%.
Bootstrap support for H2QX08 as seed ortholog is 100%.

Group of orthologs #986. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.troglodytes:228

P0CM44              	100.00%		H2QMI1              	100.00%
Bootstrap support for P0CM44 as seed ortholog is 100%.
Bootstrap support for H2QMI1 as seed ortholog is 100%.

Group of orthologs #987. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.troglodytes:228

Q5KGU0              	100.00%		H2QSN4              	100.00%
Bootstrap support for Q5KGU0 as seed ortholog is 83%.
Bootstrap support for H2QSN4 as seed ortholog is 100%.

Group of orthologs #988. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.troglodytes:228

Q5KK07              	100.00%		H2QPI4              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for H2QPI4 as seed ortholog is 100%.

Group of orthologs #989. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:34 P.troglodytes:91

Q5KMM0              	100.00%		H2PYR1              	100.00%
Q5KML4              	47.18%		H2Q253              	100.00%
                    	       		Q0ZQL1              	22.00%
Bootstrap support for Q5KMM0 as seed ortholog is 92%.
Bootstrap support for H2PYR1 as seed ortholog is 99%.
Bootstrap support for H2Q253 as seed ortholog is 99%.

Group of orthologs #990. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.troglodytes:227

Q5KKJ2              	100.00%		H2PZA5              	100.00%
Bootstrap support for Q5KKJ2 as seed ortholog is 100%.
Bootstrap support for H2PZA5 as seed ortholog is 100%.

Group of orthologs #991. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.troglodytes:227

Q5K8R7              	100.00%		H2QCB0              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for H2QCB0 as seed ortholog is 100%.

Group of orthologs #992. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.troglodytes:227

Q5KEQ0              	100.00%		H2R9E3              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for H2R9E3 as seed ortholog is 100%.

Group of orthologs #993. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.troglodytes:227

Q5KQ17              	100.00%		H2R662              	100.00%
Bootstrap support for Q5KQ17 as seed ortholog is 100%.
Bootstrap support for H2R662 as seed ortholog is 100%.

Group of orthologs #994. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.troglodytes:227

Q5KLV9              	100.00%		H2R9E0              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for H2R9E0 as seed ortholog is 100%.

Group of orthologs #995. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.troglodytes:226

P0CN10              	100.00%		H2QEY6              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for H2QEY6 as seed ortholog is 100%.

Group of orthologs #996. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:145

Q5KBK7              	100.00%		H2QA97              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for H2QA97 as seed ortholog is 100%.

Group of orthologs #997. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.troglodytes:226

Q5KBW6              	100.00%		H2QHD4              	100.00%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for H2QHD4 as seed ortholog is 100%.

Group of orthologs #998. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.troglodytes:226

Q5KK15              	100.00%		H2QV64              	100.00%
Bootstrap support for Q5KK15 as seed ortholog is 81%.
Bootstrap support for H2QV64 as seed ortholog is 100%.

Group of orthologs #999. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.troglodytes:225

Q5KPJ7              	100.00%		H2Q1J2              	100.00%
                    	       		H2Q1J1              	25.00%
Bootstrap support for Q5KPJ7 as seed ortholog is 100%.
Bootstrap support for H2Q1J2 as seed ortholog is 100%.

Group of orthologs #1000. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.troglodytes:225

Q5KJG1              	100.00%		H2RD64              	100.00%
                    	       		H2RCC5              	45.51%
Bootstrap support for Q5KJG1 as seed ortholog is 100%.
Bootstrap support for H2RD64 as seed ortholog is 100%.

Group of orthologs #1001. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.troglodytes:224

Q5KBJ2              	100.00%		H2PXU3              	100.00%
Q5KBJ5              	44.05%		
Bootstrap support for Q5KBJ2 as seed ortholog is 87%.
Bootstrap support for H2PXU3 as seed ortholog is 100%.

Group of orthologs #1002. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.troglodytes:224

Q5K7E0              	100.00%		H2QH41              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for H2QH41 as seed ortholog is 100%.

Group of orthologs #1003. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.troglodytes:223

Q5KNS1              	100.00%		H2RER5              	100.00%
                    	       		H2QMK2              	46.27%
Bootstrap support for Q5KNS1 as seed ortholog is 100%.
Bootstrap support for H2RER5 as seed ortholog is 100%.

Group of orthologs #1004. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.troglodytes:223

Q5KJ50              	100.00%		G2HGD0              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for G2HGD0 as seed ortholog is 100%.

Group of orthologs #1005. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.troglodytes:223

Q5KAQ3              	100.00%		H2QY45              	100.00%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for H2QY45 as seed ortholog is 100%.

Group of orthologs #1006. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.troglodytes:222

Q5KGU5              	100.00%		H2QFY2              	100.00%
                    	       		Q69BK5              	100.00%
                    	       		H2QLR0              	98.14%
Bootstrap support for Q5KGU5 as seed ortholog is 100%.
Bootstrap support for H2QFY2 as seed ortholog is 100%.
Bootstrap support for Q69BK5 as seed ortholog is 100%.

Group of orthologs #1007. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.troglodytes:222

Q5KJ08              	100.00%		H2Q592              	100.00%
                    	       		Q0MQB4              	99.63%
Bootstrap support for Q5KJ08 as seed ortholog is 99%.
Bootstrap support for H2Q592 as seed ortholog is 100%.

Group of orthologs #1008. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.troglodytes:222

Q5KQ96              	100.00%		H2QVC9              	100.00%
                    	       		H2PZL9              	63.72%
Bootstrap support for Q5KQ96 as seed ortholog is 100%.
Bootstrap support for H2QVC9 as seed ortholog is 100%.

Group of orthologs #1009. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:222

Q5K959              	100.00%		H2QCT6              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 100%.
Bootstrap support for H2QCT6 as seed ortholog is 100%.

Group of orthologs #1010. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.troglodytes:222

Q5K7Y2              	100.00%		H2QJX3              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for H2QJX3 as seed ortholog is 100%.

Group of orthologs #1011. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:46

Q5KG52              	100.00%		H2QRK1              	100.00%
Bootstrap support for Q5KG52 as seed ortholog is 97%.
Bootstrap support for H2QRK1 as seed ortholog is 97%.

Group of orthologs #1012. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.troglodytes:221

Q5KDS9              	100.00%		H2Q5W5              	100.00%
                    	       		H2QDN6              	100.00%
                    	       		H2QVN0              	58.34%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for H2Q5W5 as seed ortholog is 100%.
Bootstrap support for H2QDN6 as seed ortholog is 100%.

Group of orthologs #1013. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.troglodytes:221

Q5K8Q8              	100.00%		H2QYK4              	100.00%
                    	       		H2PZG9              	15.36%
                    	       		H2R738              	8.78%
Bootstrap support for Q5K8Q8 as seed ortholog is 100%.
Bootstrap support for H2QYK4 as seed ortholog is 100%.

Group of orthologs #1014. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.troglodytes:44

Q5KL88              	100.00%		G2HF14              	100.00%
Bootstrap support for Q5KL88 as seed ortholog is 99%.
Bootstrap support for G2HF14 as seed ortholog is 82%.

Group of orthologs #1015. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.troglodytes:132

Q5K938              	100.00%		H2QAD7              	100.00%
Bootstrap support for Q5K938 as seed ortholog is 99%.
Bootstrap support for H2QAD7 as seed ortholog is 100%.

Group of orthologs #1016. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:51 P.troglodytes:14

Q5KI42              	100.00%		H2Q6P9              	100.00%
Bootstrap support for Q5KI42 as seed ortholog is 97%.
Bootstrap support for H2Q6P9 as seed ortholog is 66%.
Alternative seed ortholog is H2QVB1 (14 bits away from this cluster)

Group of orthologs #1017. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.troglodytes:221

Q5KP27              	100.00%		H2QFE0              	100.00%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for H2QFE0 as seed ortholog is 100%.

Group of orthologs #1018. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.troglodytes:102

Q5KC50              	100.00%		H2R120              	100.00%
Bootstrap support for Q5KC50 as seed ortholog is 100%.
Bootstrap support for H2R120 as seed ortholog is 99%.

Group of orthologs #1019. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.troglodytes:221

Q5KKM0              	100.00%		H2QV79              	100.00%
Bootstrap support for Q5KKM0 as seed ortholog is 100%.
Bootstrap support for H2QV79 as seed ortholog is 100%.

Group of orthologs #1020. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:221

Q5KNK4              	100.00%		Q7YR35              	100.00%
Bootstrap support for Q5KNK4 as seed ortholog is 99%.
Bootstrap support for Q7YR35 as seed ortholog is 100%.

Group of orthologs #1021. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:91

Q5K7V8              	100.00%		H2PZ99              	100.00%
                    	       		H2QX73              	52.01%
                    	       		H2QFK5              	50.32%
Bootstrap support for Q5K7V8 as seed ortholog is 65%.
Alternative seed ortholog is Q5K913 (101 bits away from this cluster)
Bootstrap support for H2PZ99 as seed ortholog is 96%.

Group of orthologs #1022. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.troglodytes:220

Q5KLA2              	100.00%		H2PYB3              	100.00%
                    	       		H2RBE6              	34.86%
Bootstrap support for Q5KLA2 as seed ortholog is 99%.
Bootstrap support for H2PYB3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5K7I5              	100.00%		H2QGV2              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for H2QGV2 as seed ortholog is 100%.

Group of orthologs #1024. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5KB01              	100.00%		H2QER0              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for H2QER0 as seed ortholog is 100%.

Group of orthologs #1025. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:121

Q5K8L0              	100.00%		H2QHI8              	100.00%
Bootstrap support for Q5K8L0 as seed ortholog is 100%.
Bootstrap support for H2QHI8 as seed ortholog is 99%.

Group of orthologs #1026. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5KFF7              	100.00%		H2QGM1              	100.00%
Bootstrap support for Q5KFF7 as seed ortholog is 100%.
Bootstrap support for H2QGM1 as seed ortholog is 100%.

Group of orthologs #1027. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5KQ88              	100.00%		H2QDU0              	100.00%
Bootstrap support for Q5KQ88 as seed ortholog is 100%.
Bootstrap support for H2QDU0 as seed ortholog is 100%.

Group of orthologs #1028. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5K9W6              	100.00%		H2QUN6              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for H2QUN6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5KNW3              	100.00%		H2QNU5              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 100%.
Bootstrap support for H2QNU5 as seed ortholog is 100%.

Group of orthologs #1030. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.troglodytes:220

Q5KAG9              	100.00%		H2RDP4              	100.00%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for H2RDP4 as seed ortholog is 100%.

Group of orthologs #1031. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.troglodytes:219

Q5KGJ7              	100.00%		H2Q7Q8              	100.00%
                    	       		H2R6T7              	80.09%
Bootstrap support for Q5KGJ7 as seed ortholog is 100%.
Bootstrap support for H2Q7Q8 as seed ortholog is 100%.

Group of orthologs #1032. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.troglodytes:219

Q5K7R1              	100.00%		H2QBG4              	100.00%
Bootstrap support for Q5K7R1 as seed ortholog is 100%.
Bootstrap support for H2QBG4 as seed ortholog is 100%.

Group of orthologs #1033. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.troglodytes:219

Q5KFP2              	100.00%		H2QU28              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 100%.
Bootstrap support for H2QU28 as seed ortholog is 100%.

Group of orthologs #1034. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.troglodytes:218

Q5KN72              	100.00%		H2QZE6              	100.00%
                    	       		H2QFH9              	30.41%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for H2QZE6 as seed ortholog is 100%.

Group of orthologs #1035. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.troglodytes:218

Q5KEY4              	100.00%		H2QQM9              	100.00%
Bootstrap support for Q5KEY4 as seed ortholog is 100%.
Bootstrap support for H2QQM9 as seed ortholog is 100%.

Group of orthologs #1036. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.troglodytes:218

Q5KHA1              	100.00%		H2R2Y8              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for H2R2Y8 as seed ortholog is 100%.

Group of orthologs #1037. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.troglodytes:163

Q5KKF8              	100.00%		H2RCM9              	100.00%
Bootstrap support for Q5KKF8 as seed ortholog is 100%.
Bootstrap support for H2RCM9 as seed ortholog is 99%.

Group of orthologs #1038. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:79

Q5KA58              	100.00%		H2QNP1              	100.00%
                    	       		H2R3Y8              	37.21%
                    	       		H2R3R1              	10.67%
                    	       		H2R0H2              	9.81%
                    	       		H2QYS2              	8.56%
                    	       		H2QB44              	5.96%
                    	       		H2QBA6              	5.48%
Bootstrap support for Q5KA58 as seed ortholog is 97%.
Bootstrap support for H2QNP1 as seed ortholog is 91%.

Group of orthologs #1039. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.troglodytes:217

Q5KP78              	100.00%		H2PY91              	100.00%
Q5KP94              	100.00%		H2QNV4              	100.00%
Bootstrap support for Q5KP78 as seed ortholog is 100%.
Bootstrap support for Q5KP94 as seed ortholog is 100%.
Bootstrap support for H2PY91 as seed ortholog is 100%.
Bootstrap support for H2QNV4 as seed ortholog is 100%.

Group of orthologs #1040. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:110

P0CP84              	100.00%		G2HDU7              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 99%.
Bootstrap support for G2HDU7 as seed ortholog is 100%.

Group of orthologs #1041. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.troglodytes:217

Q5KDF6              	100.00%		G2HEK6              	100.00%
Bootstrap support for Q5KDF6 as seed ortholog is 100%.
Bootstrap support for G2HEK6 as seed ortholog is 100%.

Group of orthologs #1042. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:135

Q5KDR7              	100.00%		H2QMW7              	100.00%
Bootstrap support for Q5KDR7 as seed ortholog is 99%.
Bootstrap support for H2QMW7 as seed ortholog is 99%.

Group of orthologs #1043. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.troglodytes:217

Q5KG31              	100.00%		H2QVA9              	100.00%
Bootstrap support for Q5KG31 as seed ortholog is 100%.
Bootstrap support for H2QVA9 as seed ortholog is 100%.

Group of orthologs #1044. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.troglodytes:217

Q5KG39              	100.00%		H2R9J0              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for H2R9J0 as seed ortholog is 100%.

Group of orthologs #1045. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.troglodytes:216

Q5KK16              	100.00%		H2QDZ7              	100.00%
Bootstrap support for Q5KK16 as seed ortholog is 100%.
Bootstrap support for H2QDZ7 as seed ortholog is 100%.

Group of orthologs #1046. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.troglodytes:216

Q5KDB3              	100.00%		H2QUE4              	100.00%
Bootstrap support for Q5KDB3 as seed ortholog is 100%.
Bootstrap support for H2QUE4 as seed ortholog is 100%.

Group of orthologs #1047. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.troglodytes:216

Q5KA46              	100.00%		H2RE42              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for H2RE42 as seed ortholog is 100%.

Group of orthologs #1048. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.troglodytes:215

Q5KJ55              	100.00%		H2Q098              	100.00%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for H2Q098 as seed ortholog is 100%.

Group of orthologs #1049. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.troglodytes:215

Q5KDX3              	100.00%		H2QLI7              	100.00%
Bootstrap support for Q5KDX3 as seed ortholog is 99%.
Bootstrap support for H2QLI7 as seed ortholog is 100%.

Group of orthologs #1050. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.troglodytes:214

Q5KA31              	100.00%		H2Q8Q7              	100.00%
                    	       		H2R0B5              	30.48%
Bootstrap support for Q5KA31 as seed ortholog is 100%.
Bootstrap support for H2Q8Q7 as seed ortholog is 100%.

Group of orthologs #1051. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.troglodytes:214

P0CQ64              	100.00%		H2QZ23              	100.00%
                    	       		H2Q7R0              	54.04%
Bootstrap support for P0CQ64 as seed ortholog is 100%.
Bootstrap support for H2QZ23 as seed ortholog is 100%.

Group of orthologs #1052. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:7

Q5KGS1              	100.00%		H2QXT2              	100.00%
Bootstrap support for Q5KGS1 as seed ortholog is 100%.
Bootstrap support for H2QXT2 as seed ortholog is 66%.
Alternative seed ortholog is H2RDR2 (7 bits away from this cluster)

Group of orthologs #1053. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.troglodytes:213

Q5KGW3              	100.00%		H2QTX2              	100.00%
Q5KER8              	12.29%		
Bootstrap support for Q5KGW3 as seed ortholog is 100%.
Bootstrap support for H2QTX2 as seed ortholog is 100%.

Group of orthologs #1054. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.troglodytes:77

Q5KLR5              	100.00%		H2RDN7              	100.00%
Q5K808              	26.76%		
Bootstrap support for Q5KLR5 as seed ortholog is 100%.
Bootstrap support for H2RDN7 as seed ortholog is 95%.

Group of orthologs #1055. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.troglodytes:146

Q5KFB0              	100.00%		H2Q8G7              	100.00%
Bootstrap support for Q5KFB0 as seed ortholog is 100%.
Bootstrap support for H2Q8G7 as seed ortholog is 99%.

Group of orthologs #1056. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.troglodytes:213

Q5KKV3              	100.00%		H2Q762              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for H2Q762 as seed ortholog is 100%.

Group of orthologs #1057. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.troglodytes:162

Q5KAB6              	100.00%		H2QMQ3              	100.00%
Bootstrap support for Q5KAB6 as seed ortholog is 100%.
Bootstrap support for H2QMQ3 as seed ortholog is 99%.

Group of orthologs #1058. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.troglodytes:77

Q5KKY7              	100.00%		H2QCS0              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for H2QCS0 as seed ortholog is 91%.

Group of orthologs #1059. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:66

Q5KGE7              	100.00%		H2Q6L8              	100.00%
                    	       		H2R4I1              	64.65%
Bootstrap support for Q5KGE7 as seed ortholog is 99%.
Bootstrap support for H2Q6L8 as seed ortholog is 99%.

Group of orthologs #1060. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.troglodytes:212

Q5KCL9              	100.00%		H2QBF0              	100.00%
Bootstrap support for Q5KCL9 as seed ortholog is 100%.
Bootstrap support for H2QBF0 as seed ortholog is 100%.

Group of orthologs #1061. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.troglodytes:212

Q5K8Y6              	100.00%		H2QV02              	100.00%
Bootstrap support for Q5K8Y6 as seed ortholog is 100%.
Bootstrap support for H2QV02 as seed ortholog is 100%.

Group of orthologs #1062. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.troglodytes:212

Q5KCU5              	100.00%		H2QXP6              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for H2QXP6 as seed ortholog is 100%.

Group of orthologs #1063. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.troglodytes:212

P0CN64              	100.00%		H2R7H3              	100.00%
Bootstrap support for P0CN64 as seed ortholog is 100%.
Bootstrap support for H2R7H3 as seed ortholog is 100%.

Group of orthologs #1064. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:211

Q5KGK6              	100.00%		H2QH77              	100.00%
                    	       		H2QCF1              	17.07%
Bootstrap support for Q5KGK6 as seed ortholog is 91%.
Bootstrap support for H2QH77 as seed ortholog is 100%.

Group of orthologs #1065. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.troglodytes:211

Q5K8I4              	100.00%		H2Q1B6              	100.00%
Bootstrap support for Q5K8I4 as seed ortholog is 100%.
Bootstrap support for H2Q1B6 as seed ortholog is 100%.

Group of orthologs #1066. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.troglodytes:211

P0CM34              	100.00%		H2QN39              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for H2QN39 as seed ortholog is 100%.

Group of orthologs #1067. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.troglodytes:211

Q5KJJ4              	100.00%		H2QA99              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for H2QA99 as seed ortholog is 100%.

Group of orthologs #1068. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:29 P.troglodytes:131

Q5KDF7              	100.00%		H2QWJ5              	100.00%
Bootstrap support for Q5KDF7 as seed ortholog is 81%.
Bootstrap support for H2QWJ5 as seed ortholog is 99%.

Group of orthologs #1069. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.troglodytes:211

Q5KGW5              	100.00%		H2QYT7              	100.00%
Bootstrap support for Q5KGW5 as seed ortholog is 100%.
Bootstrap support for H2QYT7 as seed ortholog is 100%.

Group of orthologs #1070. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.troglodytes:210

Q5KAA5              	100.00%		H2R1Y0              	100.00%
                    	       		H2R267              	60.13%
                    	       		H2Q7M3              	9.28%
                    	       		H2R1G5              	8.80%
                    	       		H2Q5V7              	7.94%
                    	       		H2RB20              	6.50%
                    	       		H2QD88              	5.81%
Bootstrap support for Q5KAA5 as seed ortholog is 100%.
Bootstrap support for H2R1Y0 as seed ortholog is 100%.

Group of orthologs #1071. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.troglodytes:210

Q5KHZ3              	100.00%		H2Q4P4              	100.00%
Bootstrap support for Q5KHZ3 as seed ortholog is 100%.
Bootstrap support for H2Q4P4 as seed ortholog is 100%.

Group of orthologs #1072. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.troglodytes:210

P0CR18              	100.00%		H2QIB4              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for H2QIB4 as seed ortholog is 100%.

Group of orthologs #1073. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:160

Q5KLT0              	100.00%		H2QKI3              	100.00%
Bootstrap support for Q5KLT0 as seed ortholog is 99%.
Bootstrap support for H2QKI3 as seed ortholog is 100%.

Group of orthologs #1074. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:210

Q5KAM1              	100.00%		H2R9Y3              	100.00%
Bootstrap support for Q5KAM1 as seed ortholog is 99%.
Bootstrap support for H2R9Y3 as seed ortholog is 100%.

Group of orthologs #1075. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:209

Q5KGD8              	100.00%		H2QN96              	100.00%
                    	       		H2QM85              	44.21%
                    	       		H2R4E8              	23.32%
Bootstrap support for Q5KGD8 as seed ortholog is 94%.
Bootstrap support for H2QN96 as seed ortholog is 100%.

Group of orthologs #1076. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.troglodytes:76

Q5KPB8              	100.00%		H2QHE6              	100.00%
                    	       		H2R2B9              	39.72%
Bootstrap support for Q5KPB8 as seed ortholog is 100%.
Bootstrap support for H2QHE6 as seed ortholog is 95%.

Group of orthologs #1077. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:39 P.troglodytes:129

Q5K717              	100.00%		H2QL82              	100.00%
Bootstrap support for Q5K717 as seed ortholog is 88%.
Bootstrap support for H2QL82 as seed ortholog is 99%.

Group of orthologs #1078. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.troglodytes:209

Q5KH21              	100.00%		H2QFZ7              	100.00%
Bootstrap support for Q5KH21 as seed ortholog is 100%.
Bootstrap support for H2QFZ7 as seed ortholog is 100%.

Group of orthologs #1079. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.troglodytes:209

Q5K9I8              	100.00%		H2QYB9              	100.00%
Bootstrap support for Q5K9I8 as seed ortholog is 100%.
Bootstrap support for H2QYB9 as seed ortholog is 100%.

Group of orthologs #1080. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.troglodytes:209

Q5KND0              	100.00%		H2QW58              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for H2QW58 as seed ortholog is 100%.

Group of orthologs #1081. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.troglodytes:209

Q5K9Z8              	100.00%		H2RFX7              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 100%.
Bootstrap support for H2RFX7 as seed ortholog is 100%.

Group of orthologs #1082. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:13

Q5KE11              	100.00%		G2HG33              	100.00%
                    	       		H2PYL2              	100.00%
                    	       		H2QWI8              	81.18%
                    	       		H2QHG8              	37.63%
                    	       		H2PYR0              	34.62%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for G2HG33 as seed ortholog is 77%.
Bootstrap support for H2PYL2 as seed ortholog is 77%.

Group of orthologs #1083. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:208

Q5KN33              	100.00%		H2QV21              	100.00%
                    	       		H2QZ32              	40.17%
                    	       		H2QZ33              	21.09%
Bootstrap support for Q5KN33 as seed ortholog is 100%.
Bootstrap support for H2QV21 as seed ortholog is 100%.

Group of orthologs #1084. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.troglodytes:114

Q5KGB5              	100.00%		H2QLZ6              	100.00%
                    	       		H2Q0W7              	43.17%
Bootstrap support for Q5KGB5 as seed ortholog is 100%.
Bootstrap support for H2QLZ6 as seed ortholog is 100%.

Group of orthologs #1085. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.troglodytes:51

Q5KD66              	100.00%		H2Q1Z6              	100.00%
Bootstrap support for Q5KD66 as seed ortholog is 75%.
Bootstrap support for H2Q1Z6 as seed ortholog is 92%.

Group of orthologs #1086. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:79

P0CM54              	100.00%		H2QI05              	100.00%
Bootstrap support for P0CM54 as seed ortholog is 100%.
Bootstrap support for H2QI05 as seed ortholog is 99%.

Group of orthologs #1087. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:36 P.troglodytes:208

Q5K7Y0              	100.00%		H2QMT1              	100.00%
Bootstrap support for Q5K7Y0 as seed ortholog is 74%.
Alternative seed ortholog is Q5K918 (36 bits away from this cluster)
Bootstrap support for H2QMT1 as seed ortholog is 100%.

Group of orthologs #1088. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:208

Q5K7M8              	100.00%		H2QZT6              	100.00%
Bootstrap support for Q5K7M8 as seed ortholog is 100%.
Bootstrap support for H2QZT6 as seed ortholog is 100%.

Group of orthologs #1089. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:208

Q5KGM0              	100.00%		H2QTE2              	100.00%
Bootstrap support for Q5KGM0 as seed ortholog is 100%.
Bootstrap support for H2QTE2 as seed ortholog is 100%.

Group of orthologs #1090. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.troglodytes:208

Q5KLK2              	100.00%		H2R5P6              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for H2R5P6 as seed ortholog is 100%.

Group of orthologs #1091. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:110

P0CP14              	100.00%		H2Q0X6              	100.00%
                    	       		H2QLU4              	42.01%
                    	       		H2Q341              	35.87%
Bootstrap support for P0CP14 as seed ortholog is 98%.
Bootstrap support for H2Q0X6 as seed ortholog is 99%.

Group of orthologs #1092. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:207

Q5KAX2              	100.00%		H2Q9I7              	100.00%
Q5KG95              	11.14%		H2QR05              	33.28%
Bootstrap support for Q5KAX2 as seed ortholog is 99%.
Bootstrap support for H2Q9I7 as seed ortholog is 100%.

Group of orthologs #1093. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 P.troglodytes:207

Q5K6T5              	100.00%		H2QY82              	100.00%
Bootstrap support for Q5K6T5 as seed ortholog is 100%.
Bootstrap support for H2QY82 as seed ortholog is 100%.

Group of orthologs #1094. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 P.troglodytes:103

Q5KGI2              	100.00%		H2QUP2              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for H2QUP2 as seed ortholog is 97%.

Group of orthologs #1095. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 P.troglodytes:207

Q5KF90              	100.00%		H2QX51              	100.00%
Bootstrap support for Q5KF90 as seed ortholog is 100%.
Bootstrap support for H2QX51 as seed ortholog is 100%.

Group of orthologs #1096. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.troglodytes:206

Q5KCN0              	100.00%		H2QHQ4              	100.00%
                    	       		H2R0E9              	12.66%
                    	       		H2QIW6              	6.53%
Bootstrap support for Q5KCN0 as seed ortholog is 100%.
Bootstrap support for H2QHQ4 as seed ortholog is 100%.

Group of orthologs #1097. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:132 P.troglodytes:126

Q5K756              	100.00%		H2Q6N9              	100.00%
Q5KM34              	13.45%		
Bootstrap support for Q5K756 as seed ortholog is 99%.
Bootstrap support for H2Q6N9 as seed ortholog is 99%.

Group of orthologs #1098. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:206

Q5KB25              	100.00%		H2Q8L0              	100.00%
Bootstrap support for Q5KB25 as seed ortholog is 99%.
Bootstrap support for H2Q8L0 as seed ortholog is 100%.

Group of orthologs #1099. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.troglodytes:206

Q5KIC5              	100.00%		H2QGR8              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for H2QGR8 as seed ortholog is 100%.

Group of orthologs #1100. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:130

Q5KH36              	100.00%		H2Q235              	100.00%
                    	       		H2QI17              	13.66%
                    	       		H2R217              	13.53%
                    	       		H2RCZ5              	12.16%
                    	       		A5A6L7              	12.16%
                    	       		Q5R1W0              	12.03%
                    	       		H2QPR8              	10.65%
                    	       		A5A6M2              	9.15%
                    	       		H2Q258              	8.27%
                    	       		H2R8D1              	7.52%
Bootstrap support for Q5KH36 as seed ortholog is 100%.
Bootstrap support for H2Q235 as seed ortholog is 99%.

Group of orthologs #1101. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:205

Q5K9E2              	100.00%		H2R2M6              	100.00%
                    	       		H2QQM1              	29.57%
Bootstrap support for Q5K9E2 as seed ortholog is 100%.
Bootstrap support for H2R2M6 as seed ortholog is 100%.

Group of orthologs #1102. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:205

Q5KHT0              	100.00%		H2QZN6              	100.00%
                    	       		H2QNQ9              	35.50%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for H2QZN6 as seed ortholog is 100%.

Group of orthologs #1103. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:205

Q5K8H7              	100.00%		H2Q1L5              	100.00%
Bootstrap support for Q5K8H7 as seed ortholog is 100%.
Bootstrap support for H2Q1L5 as seed ortholog is 100%.

Group of orthologs #1104. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:205

Q5K9V0              	100.00%		H2QBI4              	100.00%
Bootstrap support for Q5K9V0 as seed ortholog is 100%.
Bootstrap support for H2QBI4 as seed ortholog is 100%.

Group of orthologs #1105. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:154

Q5KIG4              	100.00%		H2QHX2              	100.00%
Bootstrap support for Q5KIG4 as seed ortholog is 100%.
Bootstrap support for H2QHX2 as seed ortholog is 100%.

Group of orthologs #1106. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:205

Q5KF27              	100.00%		H2QNJ0              	100.00%
Bootstrap support for Q5KF27 as seed ortholog is 100%.
Bootstrap support for H2QNJ0 as seed ortholog is 100%.

Group of orthologs #1107. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:53

Q5KLM4              	100.00%		H2QIW8              	100.00%
Bootstrap support for Q5KLM4 as seed ortholog is 100%.
Bootstrap support for H2QIW8 as seed ortholog is 92%.

Group of orthologs #1108. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:30

Q5KAF9              	100.00%		H2R5K3              	100.00%
Bootstrap support for Q5KAF9 as seed ortholog is 99%.
Bootstrap support for H2R5K3 as seed ortholog is 82%.

Group of orthologs #1109. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.troglodytes:205

Q5KKD1              	100.00%		H2REG6              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for H2REG6 as seed ortholog is 100%.

Group of orthologs #1110. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.troglodytes:136

P0CS30              	100.00%		H2QIC7              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 100%.
Bootstrap support for H2QIC7 as seed ortholog is 99%.

Group of orthologs #1111. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.troglodytes:204

Q5KPX1              	100.00%		H2Q714              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for H2Q714 as seed ortholog is 100%.

Group of orthologs #1112. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.troglodytes:204

Q5KKW5              	100.00%		H2QEE8              	100.00%
Bootstrap support for Q5KKW5 as seed ortholog is 100%.
Bootstrap support for H2QEE8 as seed ortholog is 100%.

Group of orthologs #1113. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.troglodytes:204

Q5KP19              	100.00%		H2QBR6              	100.00%
Bootstrap support for Q5KP19 as seed ortholog is 100%.
Bootstrap support for H2QBR6 as seed ortholog is 100%.

Group of orthologs #1114. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.troglodytes:204

Q5KNA5              	100.00%		H2QXC9              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for H2QXC9 as seed ortholog is 100%.

Group of orthologs #1115. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.troglodytes:204

Q5KMV8              	100.00%		H2R4J8              	100.00%
Bootstrap support for Q5KMV8 as seed ortholog is 100%.
Bootstrap support for H2R4J8 as seed ortholog is 100%.

Group of orthologs #1116. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:203

Q5KDT2              	100.00%		H2QKE5              	100.00%
                    	       		H2QTN8              	46.75%
                    	       		H2PYJ0              	33.86%
                    	       		H2QR57              	13.68%
Bootstrap support for Q5KDT2 as seed ortholog is 100%.
Bootstrap support for H2QKE5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:203

Q5KF34              	100.00%		A1XD93              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for A1XD93 as seed ortholog is 100%.

Group of orthologs #1118. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:203

P0CS08              	100.00%		H2Q8Y9              	100.00%
Bootstrap support for P0CS08 as seed ortholog is 100%.
Bootstrap support for H2Q8Y9 as seed ortholog is 100%.

Group of orthologs #1119. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:203

Q5K8L4              	100.00%		H2Q7T0              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for H2Q7T0 as seed ortholog is 100%.

Group of orthologs #1120. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:203

Q5KPT7              	100.00%		H2QB19              	100.00%
Bootstrap support for Q5KPT7 as seed ortholog is 100%.
Bootstrap support for H2QB19 as seed ortholog is 100%.

Group of orthologs #1121. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.troglodytes:203

Q5KIE0              	100.00%		H2QRX2              	100.00%
Bootstrap support for Q5KIE0 as seed ortholog is 100%.
Bootstrap support for H2QRX2 as seed ortholog is 100%.

Group of orthologs #1122. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.troglodytes:93

P0CO86              	100.00%		H2R889              	100.00%
                    	       		A5A6J5              	39.22%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for H2R889 as seed ortholog is 98%.

Group of orthologs #1123. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:149

Q5KI36              	100.00%		H2R5G0              	100.00%
                    	       		H2Q9K4              	47.72%
Bootstrap support for Q5KI36 as seed ortholog is 99%.
Bootstrap support for H2R5G0 as seed ortholog is 99%.

Group of orthologs #1124. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.troglodytes:202

Q5KC13              	100.00%		H2Q528              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for H2Q528 as seed ortholog is 100%.

Group of orthologs #1125. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.troglodytes:202

Q5KFM2              	100.00%		H2QDY0              	100.00%
Bootstrap support for Q5KFM2 as seed ortholog is 100%.
Bootstrap support for H2QDY0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.troglodytes:202

Q5KC10              	100.00%		H2QQ29              	100.00%
Bootstrap support for Q5KC10 as seed ortholog is 100%.
Bootstrap support for H2QQ29 as seed ortholog is 100%.

Group of orthologs #1127. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.troglodytes:202

Q5KL74              	100.00%		P48778              	100.00%
Bootstrap support for Q5KL74 as seed ortholog is 100%.
Bootstrap support for P48778 as seed ortholog is 100%.

Group of orthologs #1128. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.troglodytes:201

Q5KM03              	100.00%		G2HHD1              	100.00%
Bootstrap support for Q5KM03 as seed ortholog is 100%.
Bootstrap support for G2HHD1 as seed ortholog is 100%.

Group of orthologs #1129. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.troglodytes:98

Q5KKN5              	100.00%		H2QQE3              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for H2QQE3 as seed ortholog is 99%.

Group of orthologs #1130. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.troglodytes:201

Q5KBQ8              	100.00%		H2RBG6              	100.00%
Bootstrap support for Q5KBQ8 as seed ortholog is 100%.
Bootstrap support for H2RBG6 as seed ortholog is 100%.

Group of orthologs #1131. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:7

Q5K8H5              	100.00%		H2QSH3              	100.00%
                    	       		H2QSG4              	100.00%
                    	       		H2RC04              	100.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for H2QSH3 as seed ortholog is 88%.
Bootstrap support for H2QSG4 as seed ortholog is 85%.
Bootstrap support for H2RC04 as seed ortholog is 88%.

Group of orthologs #1132. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5KJZ6              	100.00%		H2QRZ1              	100.00%
                    	       		H2R312              	78.43%
                    	       		H2Q291              	73.31%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for H2QRZ1 as seed ortholog is 100%.

Group of orthologs #1133. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5KG23              	100.00%		H2QPR9              	100.00%
                    	       		H2QZA0              	67.18%
Bootstrap support for Q5KG23 as seed ortholog is 100%.
Bootstrap support for H2QPR9 as seed ortholog is 100%.

Group of orthologs #1134. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

P0CM30              	100.00%		H2R049              	100.00%
                    	       		H2Q410              	31.67%
Bootstrap support for P0CM30 as seed ortholog is 100%.
Bootstrap support for H2R049 as seed ortholog is 100%.

Group of orthologs #1135. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:200

Q5KH86              	100.00%		H2QXB5              	100.00%
                    	       		H2QXB6              	82.39%
Bootstrap support for Q5KH86 as seed ortholog is 98%.
Bootstrap support for H2QXB5 as seed ortholog is 100%.

Group of orthologs #1136. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5KD00              	100.00%		H2RBE4              	100.00%
                    	       		H2QJE7              	54.65%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for H2RBE4 as seed ortholog is 100%.

Group of orthologs #1137. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:50

Q5KDH2              	100.00%		H2Q525              	100.00%
Bootstrap support for Q5KDH2 as seed ortholog is 97%.
Bootstrap support for H2Q525 as seed ortholog is 90%.

Group of orthologs #1138. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5K8G1              	100.00%		H2QDT5              	100.00%
Bootstrap support for Q5K8G1 as seed ortholog is 100%.
Bootstrap support for H2QDT5 as seed ortholog is 100%.

Group of orthologs #1139. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5KBW8              	100.00%		H2QJZ4              	100.00%
Bootstrap support for Q5KBW8 as seed ortholog is 100%.
Bootstrap support for H2QJZ4 as seed ortholog is 100%.

Group of orthologs #1140. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5KDI6              	100.00%		H2QIJ3              	100.00%
Bootstrap support for Q5KDI6 as seed ortholog is 100%.
Bootstrap support for H2QIJ3 as seed ortholog is 100%.

Group of orthologs #1141. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:91

Q5KKF0              	100.00%		H2QBR1              	100.00%
Bootstrap support for Q5KKF0 as seed ortholog is 99%.
Bootstrap support for H2QBR1 as seed ortholog is 97%.

Group of orthologs #1142. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:108

Q5KMC1              	100.00%		H2QMT2              	100.00%
Bootstrap support for Q5KMC1 as seed ortholog is 100%.
Bootstrap support for H2QMT2 as seed ortholog is 99%.

Group of orthologs #1143. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.troglodytes:200

Q5KQ87              	100.00%		H2QTK1              	100.00%
Bootstrap support for Q5KQ87 as seed ortholog is 100%.
Bootstrap support for H2QTK1 as seed ortholog is 100%.

Group of orthologs #1144. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:80

Q5KAP0              	100.00%		H2RH04              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 100%.
Bootstrap support for H2RH04 as seed ortholog is 99%.

Group of orthologs #1145. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:199

Q5KIZ8              	100.00%		H2Q0T5              	100.00%
                    	       		H2QMR4              	8.28%
Bootstrap support for Q5KIZ8 as seed ortholog is 100%.
Bootstrap support for H2Q0T5 as seed ortholog is 100%.

Group of orthologs #1146. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:33 P.troglodytes:40

Q5KGR6              	100.00%		H2QDG2              	100.00%
                    	       		H2Q705              	50.43%
Bootstrap support for Q5KGR6 as seed ortholog is 96%.
Bootstrap support for H2QDG2 as seed ortholog is 97%.

Group of orthologs #1147. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:105

Q5KIX3              	100.00%		H2R1U2              	100.00%
                    	       		H2R2L6              	79.02%
Bootstrap support for Q5KIX3 as seed ortholog is 89%.
Bootstrap support for H2R1U2 as seed ortholog is 98%.

Group of orthologs #1148. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:199

Q5KM60              	100.00%		H2PY69              	100.00%
Bootstrap support for Q5KM60 as seed ortholog is 100%.
Bootstrap support for H2PY69 as seed ortholog is 100%.

Group of orthologs #1149. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:102

Q5KBS2              	100.00%		H2QER3              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for H2QER3 as seed ortholog is 100%.

Group of orthologs #1150. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:199

Q5KB37              	100.00%		H2QMU5              	100.00%
Bootstrap support for Q5KB37 as seed ortholog is 100%.
Bootstrap support for H2QMU5 as seed ortholog is 100%.

Group of orthologs #1151. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:199

Q5KIE6              	100.00%		H2R123              	100.00%
Bootstrap support for Q5KIE6 as seed ortholog is 100%.
Bootstrap support for H2R123 as seed ortholog is 100%.

Group of orthologs #1152. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.troglodytes:154

Q5KGY1              	100.00%		H2R4Y0              	100.00%
Bootstrap support for Q5KGY1 as seed ortholog is 100%.
Bootstrap support for H2R4Y0 as seed ortholog is 99%.

Group of orthologs #1153. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:198

Q5KFR3              	100.00%		H2Q1M8              	100.00%
Bootstrap support for Q5KFR3 as seed ortholog is 100%.
Bootstrap support for H2Q1M8 as seed ortholog is 100%.

Group of orthologs #1154. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:198

Q5KMB9              	100.00%		G2HHR9              	100.00%
Bootstrap support for Q5KMB9 as seed ortholog is 100%.
Bootstrap support for G2HHR9 as seed ortholog is 100%.

Group of orthologs #1155. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:198

Q5K720              	100.00%		H2QGN6              	100.00%
Bootstrap support for Q5K720 as seed ortholog is 100%.
Bootstrap support for H2QGN6 as seed ortholog is 100%.

Group of orthologs #1156. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:198

Q5KE33              	100.00%		H2QI15              	100.00%
Bootstrap support for Q5KE33 as seed ortholog is 100%.
Bootstrap support for H2QI15 as seed ortholog is 100%.

Group of orthologs #1157. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:87

Q5KCE0              	100.00%		H2QK51              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for H2QK51 as seed ortholog is 97%.

Group of orthologs #1158. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:198

Q5KE34              	100.00%		H2QRA4              	100.00%
Bootstrap support for Q5KE34 as seed ortholog is 100%.
Bootstrap support for H2QRA4 as seed ortholog is 100%.

Group of orthologs #1159. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:60

Q5KG73              	100.00%		H2QY64              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 99%.
Bootstrap support for H2QY64 as seed ortholog is 90%.

Group of orthologs #1160. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:198

Q5KC07              	100.00%		H2RA61              	100.00%
Bootstrap support for Q5KC07 as seed ortholog is 100%.
Bootstrap support for H2RA61 as seed ortholog is 100%.

Group of orthologs #1161. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.troglodytes:92

Q5KIW7              	100.00%		P60052              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for P60052 as seed ortholog is 99%.

Group of orthologs #1162. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:37 P.troglodytes:35

Q5K7V1              	100.00%		H2Q672              	100.00%
                    	       		G2HJF5              	72.93%
                    	       		H2QM62              	69.00%
Bootstrap support for Q5K7V1 as seed ortholog is 79%.
Bootstrap support for H2Q672 as seed ortholog is 83%.

Group of orthologs #1163. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:197

Q5KEZ9              	100.00%		H2QR30              	100.00%
                    	       		H2Q9R2              	43.82%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for H2QR30 as seed ortholog is 100%.

Group of orthologs #1164. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:197

P0CO06              	100.00%		H2QIZ3              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for H2QIZ3 as seed ortholog is 100%.

Group of orthologs #1165. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:197

Q5KBH4              	100.00%		H2QFH0              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for H2QFH0 as seed ortholog is 100%.

Group of orthologs #1166. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:197

P0CN78              	100.00%		H2QQ10              	100.00%
Bootstrap support for P0CN78 as seed ortholog is 100%.
Bootstrap support for H2QQ10 as seed ortholog is 100%.

Group of orthologs #1167. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:197

Q5KAJ6              	100.00%		H2QNB2              	100.00%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for H2QNB2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:197

Q5K6X5              	100.00%		H2QTA5              	100.00%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for H2QTA5 as seed ortholog is 100%.

Group of orthologs #1169. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.troglodytes:139

Q5KKX5              	100.00%		H2QQ35              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for H2QQ35 as seed ortholog is 99%.

Group of orthologs #1170. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:2 P.troglodytes:196

Q5KQ29              	100.00%		H2QMJ8              	100.00%
                    	       		H2QV67              	28.55%
                    	       		H2QV81              	27.15%
                    	       		H2R868              	24.02%
                    	       		H2QZW4              	23.71%
                    	       		H2R305              	16.85%
                    	       		H2QRS4              	16.38%
                    	       		H2R2R8              	13.65%
                    	       		H2RC00              	7.72%
Bootstrap support for Q5KQ29 as seed ortholog is 53%.
Alternative seed ortholog is Q5KJC1 (2 bits away from this cluster)
Bootstrap support for H2QMJ8 as seed ortholog is 100%.

Group of orthologs #1171. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.troglodytes:196

Q5KJZ3              	100.00%		H2QXX9              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 100%.
Bootstrap support for H2QXX9 as seed ortholog is 100%.

Group of orthologs #1172. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.troglodytes:196

Q5K741              	100.00%		P60027              	100.00%
Bootstrap support for Q5K741 as seed ortholog is 100%.
Bootstrap support for P60027 as seed ortholog is 100%.

Group of orthologs #1173. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.troglodytes:195

Q5KLA9              	100.00%		H2QT43              	100.00%
                    	       		H2QT42              	25.91%
                    	       		H2QE04              	7.42%
                    	       		H2QQI0              	5.66%
Bootstrap support for Q5KLA9 as seed ortholog is 100%.
Bootstrap support for H2QT43 as seed ortholog is 100%.

Group of orthologs #1174. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.troglodytes:195

Q5KAB2              	100.00%		H2QQQ1              	100.00%
                    	       		H2R8P1              	48.74%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for H2QQQ1 as seed ortholog is 100%.

Group of orthologs #1175. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.troglodytes:195

Q5K9P5              	100.00%		H2QTX8              	100.00%
                    	       		H2Q7H2              	19.40%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for H2QTX8 as seed ortholog is 100%.

Group of orthologs #1176. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:56

Q5KGN1              	100.00%		H2QL51              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 100%.
Bootstrap support for H2QL51 as seed ortholog is 97%.

Group of orthologs #1177. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.troglodytes:195

Q5KH26              	100.00%		H2QL86              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for H2QL86 as seed ortholog is 100%.

Group of orthologs #1178. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.troglodytes:195

Q5KP79              	100.00%		H2QK82              	100.00%
Bootstrap support for Q5KP79 as seed ortholog is 100%.
Bootstrap support for H2QK82 as seed ortholog is 100%.

Group of orthologs #1179. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:61

Q5KEU0              	100.00%		H2RIJ3              	100.00%
Bootstrap support for Q5KEU0 as seed ortholog is 99%.
Bootstrap support for H2RIJ3 as seed ortholog is 99%.

Group of orthologs #1180. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:194

Q5K7S4              	100.00%		H2Q426              	100.00%
Bootstrap support for Q5K7S4 as seed ortholog is 100%.
Bootstrap support for H2Q426 as seed ortholog is 100%.

Group of orthologs #1181. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:31

Q5KFV8              	100.00%		H2PYZ9              	100.00%
Bootstrap support for Q5KFV8 as seed ortholog is 100%.
Bootstrap support for H2PYZ9 as seed ortholog is 87%.

Group of orthologs #1182. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:58

Q5KI08              	100.00%		H2Q7Q3              	100.00%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for H2Q7Q3 as seed ortholog is 90%.

Group of orthologs #1183. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:194

Q5KMU2              	100.00%		H2R0W9              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for H2R0W9 as seed ortholog is 100%.

Group of orthologs #1184. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:194

Q5KLT5              	100.00%		H2R8H9              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 100%.
Bootstrap support for H2R8H9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.troglodytes:194

Q5KNF9              	100.00%		Q2QD11              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for Q2QD11 as seed ortholog is 100%.

Group of orthologs #1186. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:106

P0CN98              	100.00%		H2QSG5              	100.00%
                    	       		H2R1N8              	96.77%
                    	       		H2Q5I5              	95.16%
                    	       		H2QSF5              	93.55%
                    	       		H2R8P7              	93.55%
                    	       		H2QSG1              	93.55%
                    	       		H2Q1A3              	91.94%
                    	       		H2R3E3              	90.32%
                    	       		H2QSI6              	88.71%
                    	       		H2QSI5              	77.42%
                    	       		H2R8P5              	74.19%
                    	       		H2QSE5              	72.58%
                    	       		H2RG51              	69.35%
                    	       		H2Q4X7              	53.23%
Bootstrap support for P0CN98 as seed ortholog is 100%.
Bootstrap support for H2QSG5 as seed ortholog is 100%.

Group of orthologs #1187. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:50

Q5KJ96              	100.00%		G2HDW3              	100.00%
                    	       		H2Q7Y3              	72.88%
Bootstrap support for Q5KJ96 as seed ortholog is 99%.
Bootstrap support for G2HDW3 as seed ortholog is 91%.

Group of orthologs #1188. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:193

Q5K777              	100.00%		H2Q778              	100.00%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for H2Q778 as seed ortholog is 100%.

Group of orthologs #1189. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:193

Q5K8D6              	100.00%		H2Q8M3              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for H2Q8M3 as seed ortholog is 100%.

Group of orthologs #1190. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:193

Q5K6Z0              	100.00%		H2QEI4              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for H2QEI4 as seed ortholog is 100%.

Group of orthologs #1191. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:193

Q5KD06              	100.00%		H2QHR8              	100.00%
Bootstrap support for Q5KD06 as seed ortholog is 100%.
Bootstrap support for H2QHR8 as seed ortholog is 100%.

Group of orthologs #1192. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:193

Q5KK73              	100.00%		H2QBV6              	100.00%
Bootstrap support for Q5KK73 as seed ortholog is 100%.
Bootstrap support for H2QBV6 as seed ortholog is 100%.

Group of orthologs #1193. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:193

Q5KIU7              	100.00%		H2QR87              	100.00%
Bootstrap support for Q5KIU7 as seed ortholog is 100%.
Bootstrap support for H2QR87 as seed ortholog is 100%.

Group of orthologs #1194. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.troglodytes:106

Q5KNX4              	100.00%		H2QTT0              	100.00%
Bootstrap support for Q5KNX4 as seed ortholog is 100%.
Bootstrap support for H2QTT0 as seed ortholog is 99%.

Group of orthologs #1195. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:31 P.troglodytes:192

Q5KK08              	100.00%		H2QQR4              	100.00%
Q5KBZ2              	36.30%		H2QQ06              	9.64%
Bootstrap support for Q5KK08 as seed ortholog is 77%.
Bootstrap support for H2QQR4 as seed ortholog is 100%.

Group of orthologs #1196. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:192

Q5KIZ3              	100.00%		H2PZ22              	100.00%
                    	       		H2Q5F6              	97.27%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for H2PZ22 as seed ortholog is 100%.

Group of orthologs #1197. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:14

Q5KM16              	100.00%		H2RA65              	100.00%
                    	       		H2QI16              	21.83%
Bootstrap support for Q5KM16 as seed ortholog is 100%.
Bootstrap support for H2RA65 as seed ortholog is 68%.
Alternative seed ortholog is H2QP29 (14 bits away from this cluster)

Group of orthologs #1198. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:192

Q5KCY7              	100.00%		H2QCA3              	100.00%
Bootstrap support for Q5KCY7 as seed ortholog is 100%.
Bootstrap support for H2QCA3 as seed ortholog is 100%.

Group of orthologs #1199. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:192

Q5KL68              	100.00%		H2Q8K0              	100.00%
Bootstrap support for Q5KL68 as seed ortholog is 100%.
Bootstrap support for H2Q8K0 as seed ortholog is 100%.

Group of orthologs #1200. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:192

Q5KDD6              	100.00%		H2QR68              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for H2QR68 as seed ortholog is 100%.

Group of orthologs #1201. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:192

Q5KMG9              	100.00%		H2QWZ0              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for H2QWZ0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.troglodytes:192

Q5KNH2              	100.00%		H2RGK0              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for H2RGK0 as seed ortholog is 100%.

Group of orthologs #1203. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KCD7              	100.00%		H2Q3Y8              	100.00%
                    	       		H2QJZ6              	13.17%
Bootstrap support for Q5KCD7 as seed ortholog is 100%.
Bootstrap support for H2Q3Y8 as seed ortholog is 100%.

Group of orthologs #1204. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5K9T5              	100.00%		H2QRQ3              	100.00%
                    	       		H2Q7P0              	30.69%
Bootstrap support for Q5K9T5 as seed ortholog is 100%.
Bootstrap support for H2QRQ3 as seed ortholog is 100%.

Group of orthologs #1205. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:120

Q5K8F4              	100.00%		H2QYH6              	100.00%
                    	       		H2QYH5              	68.98%
Bootstrap support for Q5K8F4 as seed ortholog is 99%.
Bootstrap support for H2QYH6 as seed ortholog is 99%.

Group of orthologs #1206. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.troglodytes:191

Q5KN70              	100.00%		A5A6P1              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 94%.
Bootstrap support for A5A6P1 as seed ortholog is 100%.

Group of orthologs #1207. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5K7W8              	100.00%		H2QBR4              	100.00%
Bootstrap support for Q5K7W8 as seed ortholog is 100%.
Bootstrap support for H2QBR4 as seed ortholog is 100%.

Group of orthologs #1208. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5K979              	100.00%		H2QAN1              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for H2QAN1 as seed ortholog is 100%.

Group of orthologs #1209. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KP07              	100.00%		H2PZY5              	100.00%
Bootstrap support for Q5KP07 as seed ortholog is 100%.
Bootstrap support for H2PZY5 as seed ortholog is 100%.

Group of orthologs #1210. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KAI5              	100.00%		H2QFS0              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for H2QFS0 as seed ortholog is 100%.

Group of orthologs #1211. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:85

Q5KIL7              	100.00%		H2QAB2              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for H2QAB2 as seed ortholog is 98%.

Group of orthologs #1212. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KJX3              	100.00%		H2Q9H1              	100.00%
Bootstrap support for Q5KJX3 as seed ortholog is 100%.
Bootstrap support for H2Q9H1 as seed ortholog is 100%.

Group of orthologs #1213. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KCK1              	100.00%		H2QHU0              	100.00%
Bootstrap support for Q5KCK1 as seed ortholog is 100%.
Bootstrap support for H2QHU0 as seed ortholog is 100%.

Group of orthologs #1214. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:79

Q5KFG5              	100.00%		H2QFG2              	100.00%
Bootstrap support for Q5KFG5 as seed ortholog is 99%.
Bootstrap support for H2QFG2 as seed ortholog is 98%.

Group of orthologs #1215. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KPF9              	100.00%		H2QJ54              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for H2QJ54 as seed ortholog is 100%.

Group of orthologs #1216. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KGP0              	100.00%		H2QZU3              	100.00%
Bootstrap support for Q5KGP0 as seed ortholog is 100%.
Bootstrap support for H2QZU3 as seed ortholog is 100%.

Group of orthologs #1217. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.troglodytes:191

Q5KJA8              	100.00%		H2R1P2              	100.00%
Bootstrap support for Q5KJA8 as seed ortholog is 100%.
Bootstrap support for H2R1P2 as seed ortholog is 100%.

Group of orthologs #1218. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.troglodytes:190

Q5KPE9              	100.00%		H2PXU7              	100.00%
Bootstrap support for Q5KPE9 as seed ortholog is 100%.
Bootstrap support for H2PXU7 as seed ortholog is 100%.

Group of orthologs #1219. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:65

P0CP70              	100.00%		H2R1H1              	100.00%
Bootstrap support for P0CP70 as seed ortholog is 99%.
Bootstrap support for H2R1H1 as seed ortholog is 98%.

Group of orthologs #1220. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.troglodytes:189

Q5KQ40              	100.00%		H2QL95              	100.00%
Bootstrap support for Q5KQ40 as seed ortholog is 100%.
Bootstrap support for H2QL95 as seed ortholog is 100%.

Group of orthologs #1221. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.troglodytes:81

Q5KJM4              	100.00%		H2QSS6              	100.00%
Bootstrap support for Q5KJM4 as seed ortholog is 100%.
Bootstrap support for H2QSS6 as seed ortholog is 93%.

Group of orthologs #1222. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:64

Q5K818              	100.00%		H2RD52              	100.00%
Bootstrap support for Q5K818 as seed ortholog is 99%.
Bootstrap support for H2RD52 as seed ortholog is 99%.

Group of orthologs #1223. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

Q5KB61              	100.00%		H2Q452              	100.00%
Bootstrap support for Q5KB61 as seed ortholog is 100%.
Bootstrap support for H2Q452 as seed ortholog is 100%.

Group of orthologs #1224. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

Q5KBE4              	100.00%		H2Q6F6              	100.00%
Bootstrap support for Q5KBE4 as seed ortholog is 100%.
Bootstrap support for H2Q6F6 as seed ortholog is 100%.

Group of orthologs #1225. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

Q5KN77              	100.00%		H2PY73              	100.00%
Bootstrap support for Q5KN77 as seed ortholog is 100%.
Bootstrap support for H2PY73 as seed ortholog is 100%.

Group of orthologs #1226. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

Q5KHZ6              	100.00%		H2Q3W9              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for H2Q3W9 as seed ortholog is 100%.

Group of orthologs #1227. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

Q5KGM8              	100.00%		H2Q6X0              	100.00%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for H2Q6X0 as seed ortholog is 100%.

Group of orthologs #1228. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:188

P0CN12              	100.00%		H2QSQ1              	100.00%
Bootstrap support for P0CN12 as seed ortholog is 100%.
Bootstrap support for H2QSQ1 as seed ortholog is 100%.

Group of orthologs #1229. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:57

Q5KL89              	100.00%		H2QFM7              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for H2QFM7 as seed ortholog is 99%.

Group of orthologs #1230. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.troglodytes:137

Q5KJP6              	100.00%		H2QYE6              	100.00%
Bootstrap support for Q5KJP6 as seed ortholog is 100%.
Bootstrap support for H2QYE6 as seed ortholog is 99%.

Group of orthologs #1231. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:109

Q5KAU2              	100.00%		H2RHJ8              	100.00%
Bootstrap support for Q5KAU2 as seed ortholog is 99%.
Bootstrap support for H2RHJ8 as seed ortholog is 100%.

Group of orthologs #1232. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:90

Q5KGB2              	100.00%		H2QYC2              	100.00%
                    	       		H2QV48              	76.00%
                    	       		H2R8H7              	48.00%
Bootstrap support for Q5KGB2 as seed ortholog is 100%.
Bootstrap support for H2QYC2 as seed ortholog is 100%.

Group of orthologs #1233. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:187

Q5KJJ7              	100.00%		G2HFX0              	100.00%
                    	       		H2QYS6              	23.18%
Bootstrap support for Q5KJJ7 as seed ortholog is 100%.
Bootstrap support for G2HFX0 as seed ortholog is 100%.

Group of orthologs #1234. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:88

Q5KFX1              	100.00%		H2Q2E7              	100.00%
                    	       		H2QVW4              	55.86%
Bootstrap support for Q5KFX1 as seed ortholog is 100%.
Bootstrap support for H2Q2E7 as seed ortholog is 94%.

Group of orthologs #1235. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:187

Q5K9V7              	100.00%		H2QFP4              	100.00%
                    	       		H2PZ06              	34.47%
Bootstrap support for Q5K9V7 as seed ortholog is 100%.
Bootstrap support for H2QFP4 as seed ortholog is 100%.

Group of orthologs #1236. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:187

Q5KD38              	100.00%		H2Q3I4              	100.00%
Bootstrap support for Q5KD38 as seed ortholog is 100%.
Bootstrap support for H2Q3I4 as seed ortholog is 100%.

Group of orthologs #1237. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:108

Q5K6W9              	100.00%		H2QVB6              	100.00%
Bootstrap support for Q5K6W9 as seed ortholog is 100%.
Bootstrap support for H2QVB6 as seed ortholog is 99%.

Group of orthologs #1238. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:187

Q5KGV8              	100.00%		H2QQL0              	100.00%
Bootstrap support for Q5KGV8 as seed ortholog is 100%.
Bootstrap support for H2QQL0 as seed ortholog is 100%.

Group of orthologs #1239. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:187

Q5KI91              	100.00%		H2QSZ9              	100.00%
Bootstrap support for Q5KI91 as seed ortholog is 100%.
Bootstrap support for H2QSZ9 as seed ortholog is 100%.

Group of orthologs #1240. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.troglodytes:81

Q5KHY4              	100.00%		H2QUH8              	100.00%
Bootstrap support for Q5KHY4 as seed ortholog is 100%.
Bootstrap support for H2QUH8 as seed ortholog is 99%.

Group of orthologs #1241. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:186

Q5KMA0              	100.00%		Q5R1X0              	100.00%
                    	       		H2Q351              	96.85%
                    	       		H2RBK4              	94.49%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for Q5R1X0 as seed ortholog is 100%.

Group of orthologs #1242. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:186

Q5KBT5              	100.00%		G2HHR6              	100.00%
                    	       		H2QK28              	79.60%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for G2HHR6 as seed ortholog is 100%.

Group of orthologs #1243. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:186

Q5KI79              	100.00%		H2QJ81              	100.00%
                    	       		H2QU76              	100.00%
Bootstrap support for Q5KI79 as seed ortholog is 100%.
Bootstrap support for H2QJ81 as seed ortholog is 100%.
Bootstrap support for H2QU76 as seed ortholog is 100%.

Group of orthologs #1244. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:121

Q5KI63              	100.00%		H2QNH6              	100.00%
                    	       		H2PXY6              	43.93%
Bootstrap support for Q5KI63 as seed ortholog is 90%.
Bootstrap support for H2QNH6 as seed ortholog is 99%.

Group of orthologs #1245. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:99

Q5KPC4              	100.00%		H2QXF9              	100.00%
                    	       		H2PZ16              	22.25%
Bootstrap support for Q5KPC4 as seed ortholog is 100%.
Bootstrap support for H2QXF9 as seed ortholog is 99%.

Group of orthologs #1246. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:186

Q5KGZ7              	100.00%		H2QFI6              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for H2QFI6 as seed ortholog is 100%.

Group of orthologs #1247. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:186

Q5KF53              	100.00%		H2QLS3              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for H2QLS3 as seed ortholog is 100%.

Group of orthologs #1248. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.troglodytes:186

Q5KLX2              	100.00%		H2QZF2              	100.00%
Bootstrap support for Q5KLX2 as seed ortholog is 100%.
Bootstrap support for H2QZF2 as seed ortholog is 100%.

Group of orthologs #1249. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.troglodytes:186

Q5KMZ6              	100.00%		H2RA64              	100.00%
Bootstrap support for Q5KMZ6 as seed ortholog is 98%.
Bootstrap support for H2RA64 as seed ortholog is 100%.

Group of orthologs #1250. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:185

Q5KNP2              	100.00%		H2QRM2              	100.00%
                    	       		H2QPM4              	41.27%
                    	       		H2R0C3              	35.82%
                    	       		H2R6G3              	34.98%
                    	       		H2QM78              	34.59%
                    	       		H2Q5Y3              	33.87%
                    	       		H2QVM4              	20.86%
                    	       		H2QJH6              	19.97%
                    	       		H2QD68              	16.74%
Bootstrap support for Q5KNP2 as seed ortholog is 100%.
Bootstrap support for H2QRM2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:98

Q5KJE5              	100.00%		H2R3X8              	100.00%
                    	       		H2Q6E4              	11.65%
Bootstrap support for Q5KJE5 as seed ortholog is 100%.
Bootstrap support for H2R3X8 as seed ortholog is 98%.

Group of orthologs #1252. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:185

Q5KLH8              	100.00%		H2Q6T5              	100.00%
Bootstrap support for Q5KLH8 as seed ortholog is 100%.
Bootstrap support for H2Q6T5 as seed ortholog is 100%.

Group of orthologs #1253. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:185

Q5KDF8              	100.00%		H2QPT3              	100.00%
Bootstrap support for Q5KDF8 as seed ortholog is 100%.
Bootstrap support for H2QPT3 as seed ortholog is 100%.

Group of orthologs #1254. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:185

Q5KK13              	100.00%		H2QJR9              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for H2QJR9 as seed ortholog is 100%.

Group of orthologs #1255. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:185

Q5KHG1              	100.00%		H2QVF5              	100.00%
Bootstrap support for Q5KHG1 as seed ortholog is 100%.
Bootstrap support for H2QVF5 as seed ortholog is 100%.

Group of orthologs #1256. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.troglodytes:185

Q5KJ89              	100.00%		H2R434              	100.00%
Bootstrap support for Q5KJ89 as seed ortholog is 100%.
Bootstrap support for H2R434 as seed ortholog is 100%.

Group of orthologs #1257. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:89

Q5KLP4              	100.00%		H2RCS8              	100.00%
                    	       		Q2QLF0              	81.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for H2RCS8 as seed ortholog is 99%.

Group of orthologs #1258. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:184

P0CR48              	100.00%		H2Q7U1              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for H2Q7U1 as seed ortholog is 100%.

Group of orthologs #1259. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:184

Q5KBT3              	100.00%		H2QW09              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for H2QW09 as seed ortholog is 100%.

Group of orthologs #1260. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:184

P0CO62              	100.00%		H2R3P2              	100.00%
Bootstrap support for P0CO62 as seed ortholog is 100%.
Bootstrap support for H2R3P2 as seed ortholog is 100%.

Group of orthologs #1261. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:184

P0CQ52              	100.00%		H2RCJ5              	100.00%
Bootstrap support for P0CQ52 as seed ortholog is 100%.
Bootstrap support for H2RCJ5 as seed ortholog is 100%.

Group of orthologs #1262. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.troglodytes:184

Q5KIU9              	100.00%		H2R3J1              	100.00%
Bootstrap support for Q5KIU9 as seed ortholog is 100%.
Bootstrap support for H2R3J1 as seed ortholog is 100%.

Group of orthologs #1263. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.troglodytes:183

Q5KPB3              	100.00%		H2R4U8              	100.00%
                    	       		H2Q5U6              	30.90%
                    	       		H2QJF7              	25.08%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for H2R4U8 as seed ortholog is 100%.

Group of orthologs #1264. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.troglodytes:183

Q5KKH3              	100.00%		H2Q9G9              	100.00%
Bootstrap support for Q5KKH3 as seed ortholog is 100%.
Bootstrap support for H2Q9G9 as seed ortholog is 100%.

Group of orthologs #1265. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.troglodytes:183

Q5KCX5              	100.00%		H2R3D2              	100.00%
Bootstrap support for Q5KCX5 as seed ortholog is 100%.
Bootstrap support for H2R3D2 as seed ortholog is 100%.

Group of orthologs #1266. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.troglodytes:182

Q5KEX8              	100.00%		H2QEU6              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for H2QEU6 as seed ortholog is 100%.

Group of orthologs #1267. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.troglodytes:182

Q5KNS3              	100.00%		H2QY86              	100.00%
Bootstrap support for Q5KNS3 as seed ortholog is 100%.
Bootstrap support for H2QY86 as seed ortholog is 100%.

Group of orthologs #1268. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.troglodytes:119

Q5KED8              	100.00%		H2QRP8              	100.00%
                    	       		H2RA79              	38.15%
Bootstrap support for Q5KED8 as seed ortholog is 100%.
Bootstrap support for H2QRP8 as seed ortholog is 100%.

Group of orthologs #1269. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.troglodytes:181

Q5KL10              	100.00%		H2R6Q8              	100.00%
Bootstrap support for Q5KL10 as seed ortholog is 100%.
Bootstrap support for H2R6Q8 as seed ortholog is 100%.

Group of orthologs #1270. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:180

Q5KJ21              	100.00%		Q5R1W6              	100.00%
Q5K7P5              	32.81%		H2QQD7              	63.43%
Q5KHG5              	30.97%		H2QZA6              	49.95%
Bootstrap support for Q5KJ21 as seed ortholog is 96%.
Bootstrap support for Q5R1W6 as seed ortholog is 100%.

Group of orthologs #1271. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:67

Q5KES1              	100.00%		H2Q6T8              	100.00%
                    	       		H2QVG3              	23.26%
Bootstrap support for Q5KES1 as seed ortholog is 98%.
Bootstrap support for H2Q6T8 as seed ortholog is 99%.

Group of orthologs #1272. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

Q5KAZ2              	100.00%		H2QS36              	100.00%
                    	       		H2QID3              	34.95%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for H2QS36 as seed ortholog is 100%.

Group of orthologs #1273. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

Q5KFF3              	100.00%		H2PZC5              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for H2PZC5 as seed ortholog is 100%.

Group of orthologs #1274. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

Q5KFJ8              	100.00%		H2Q983              	100.00%
Bootstrap support for Q5KFJ8 as seed ortholog is 100%.
Bootstrap support for H2Q983 as seed ortholog is 100%.

Group of orthologs #1275. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

P0CQ06              	100.00%		H2QM47              	100.00%
Bootstrap support for P0CQ06 as seed ortholog is 100%.
Bootstrap support for H2QM47 as seed ortholog is 100%.

Group of orthologs #1276. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

Q5KJT1              	100.00%		H2QTI0              	100.00%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for H2QTI0 as seed ortholog is 100%.

Group of orthologs #1277. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

Q5KKW8              	100.00%		H2QYV2              	100.00%
Bootstrap support for Q5KKW8 as seed ortholog is 100%.
Bootstrap support for H2QYV2 as seed ortholog is 100%.

Group of orthologs #1278. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.troglodytes:95

Q5KM53              	100.00%		H2R3E2              	100.00%
Bootstrap support for Q5KM53 as seed ortholog is 99%.
Bootstrap support for H2R3E2 as seed ortholog is 99%.

Group of orthologs #1279. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.troglodytes:180

Q5KN16              	100.00%		H2REW5              	100.00%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for H2REW5 as seed ortholog is 100%.

Group of orthologs #1280. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:51

Q5KP33              	100.00%		H2R7U6              	100.00%
                    	       		H2RIG9              	88.36%
                    	       		H2RGI6              	59.71%
Bootstrap support for Q5KP33 as seed ortholog is 100%.
Bootstrap support for H2R7U6 as seed ortholog is 91%.

Group of orthologs #1281. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:179

Q5KHL4              	100.00%		H2QNR9              	100.00%
                    	       		H2QY99              	82.74%
Bootstrap support for Q5KHL4 as seed ortholog is 99%.
Bootstrap support for H2QNR9 as seed ortholog is 100%.

Group of orthologs #1282. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:179

Q5KAD8              	100.00%		H2R474              	100.00%
                    	       		H2QIY9              	34.59%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for H2R474 as seed ortholog is 100%.

Group of orthologs #1283. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:179

Q5KBC4              	100.00%		H2PYP1              	100.00%
Bootstrap support for Q5KBC4 as seed ortholog is 100%.
Bootstrap support for H2PYP1 as seed ortholog is 100%.

Group of orthologs #1284. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:179

Q5K844              	100.00%		H2Q8Z8              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for H2Q8Z8 as seed ortholog is 100%.

Group of orthologs #1285. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:91

Q5KI70              	100.00%		H2QH65              	100.00%
Bootstrap support for Q5KI70 as seed ortholog is 99%.
Bootstrap support for H2QH65 as seed ortholog is 99%.

Group of orthologs #1286. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:179

Q5KF20              	100.00%		H2QV15              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 100%.
Bootstrap support for H2QV15 as seed ortholog is 100%.

Group of orthologs #1287. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.troglodytes:179

Q5KQ70              	100.00%		H2RIL3              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for H2RIL3 as seed ortholog is 100%.

Group of orthologs #1288. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.troglodytes:178

Q5KAJ2              	100.00%		H2Q6R7              	100.00%
                    	       		H2Q0Z8              	44.83%
                    	       		H2R1K4              	23.04%
Bootstrap support for Q5KAJ2 as seed ortholog is 100%.
Bootstrap support for H2Q6R7 as seed ortholog is 100%.

Group of orthologs #1289. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.troglodytes:178

Q5KI93              	100.00%		H2RBV0              	100.00%
                    	       		H2QCF5              	36.56%
Bootstrap support for Q5KI93 as seed ortholog is 100%.
Bootstrap support for H2RBV0 as seed ortholog is 100%.

Group of orthologs #1290. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.troglodytes:178

Q5K6Y5              	100.00%		H2QHK8              	100.00%
Bootstrap support for Q5K6Y5 as seed ortholog is 100%.
Bootstrap support for H2QHK8 as seed ortholog is 100%.

Group of orthologs #1291. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.troglodytes:178

Q5K850              	100.00%		H2QLW7              	100.00%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for H2QLW7 as seed ortholog is 100%.

Group of orthologs #1292. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.troglodytes:120

Q5KJI9              	100.00%		H2R414              	100.00%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for H2R414 as seed ortholog is 99%.

Group of orthologs #1293. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.troglodytes:177

Q5KK68              	100.00%		H2QMN9              	100.00%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for H2QMN9 as seed ortholog is 100%.

Group of orthologs #1294. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.troglodytes:176

Q5KGR3              	100.00%		H2QVD5              	100.00%
                    	       		H2QVD6              	100.00%
                    	       		H2QVD8              	53.38%
                    	       		H2QVD7              	43.24%
                    	       		H2QNJ5              	23.26%
                    	       		H2QW97              	20.74%
                    	       		H2QNJ6              	19.12%
                    	       		H2Q7J0              	13.97%
                    	       		H2QJA6              	11.63%
Bootstrap support for Q5KGR3 as seed ortholog is 100%.
Bootstrap support for H2QVD5 as seed ortholog is 100%.
Bootstrap support for H2QVD6 as seed ortholog is 100%.

Group of orthologs #1295. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.troglodytes:115

Q5KA56              	100.00%		H2Q2G0              	100.00%
                    	       		H2QS19              	71.19%
                    	       		H2Q2I1              	35.07%
                    	       		H2QI41              	10.65%
Bootstrap support for Q5KA56 as seed ortholog is 100%.
Bootstrap support for H2Q2G0 as seed ortholog is 99%.

Group of orthologs #1296. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.troglodytes:176

Q5KJ49              	100.00%		H2QC54              	100.00%
Bootstrap support for Q5KJ49 as seed ortholog is 100%.
Bootstrap support for H2QC54 as seed ortholog is 100%.

Group of orthologs #1297. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.troglodytes:176

P0CM82              	100.00%		H2QXY9              	100.00%
Bootstrap support for P0CM82 as seed ortholog is 100%.
Bootstrap support for H2QXY9 as seed ortholog is 100%.

Group of orthologs #1298. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.troglodytes:176

Q5KMU1              	100.00%		H2QXJ3              	100.00%
Bootstrap support for Q5KMU1 as seed ortholog is 100%.
Bootstrap support for H2QXJ3 as seed ortholog is 100%.

Group of orthologs #1299. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.troglodytes:176

Q5KGV9              	100.00%		H2RFG1              	100.00%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for H2RFG1 as seed ortholog is 100%.

Group of orthologs #1300. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KLR2              	100.00%		H2RI35              	100.00%
Q5KLQ4              	53.90%		H2QLM4              	16.52%
Bootstrap support for Q5KLR2 as seed ortholog is 100%.
Bootstrap support for H2RI35 as seed ortholog is 100%.

Group of orthologs #1301. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:17

Q5KB48              	100.00%		H2QA72              	100.00%
Bootstrap support for Q5KB48 as seed ortholog is 99%.
Bootstrap support for H2QA72 as seed ortholog is 70%.
Alternative seed ortholog is H2QWE7 (17 bits away from this cluster)

Group of orthologs #1302. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

P0CN66              	100.00%		H2QGB1              	100.00%
Bootstrap support for P0CN66 as seed ortholog is 100%.
Bootstrap support for H2QGB1 as seed ortholog is 100%.

Group of orthologs #1303. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KCF0              	100.00%		H2QCD8              	100.00%
Bootstrap support for Q5KCF0 as seed ortholog is 100%.
Bootstrap support for H2QCD8 as seed ortholog is 100%.

Group of orthologs #1304. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KGQ8              	100.00%		H2QND8              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for H2QND8 as seed ortholog is 100%.

Group of orthologs #1305. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KGK7              	100.00%		H2R205              	100.00%
Bootstrap support for Q5KGK7 as seed ortholog is 100%.
Bootstrap support for H2R205 as seed ortholog is 100%.

Group of orthologs #1306. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KBY9              	100.00%		H2R6X4              	100.00%
Bootstrap support for Q5KBY9 as seed ortholog is 100%.
Bootstrap support for H2R6X4 as seed ortholog is 100%.

Group of orthologs #1307. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KFN9              	100.00%		H2R380              	100.00%
Bootstrap support for Q5KFN9 as seed ortholog is 100%.
Bootstrap support for H2R380 as seed ortholog is 100%.

Group of orthologs #1308. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5KPU2              	100.00%		H2QX29              	100.00%
Bootstrap support for Q5KPU2 as seed ortholog is 100%.
Bootstrap support for H2QX29 as seed ortholog is 100%.

Group of orthologs #1309. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.troglodytes:175

Q5K8W6              	100.00%		H2RGH3              	100.00%
Bootstrap support for Q5K8W6 as seed ortholog is 100%.
Bootstrap support for H2RGH3 as seed ortholog is 100%.

Group of orthologs #1310. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

Q5KEW0              	100.00%		H2Q226              	100.00%
                    	       		H2QPY2              	34.91%
                    	       		H2QRL4              	16.01%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for H2Q226 as seed ortholog is 100%.

Group of orthologs #1311. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

Q5KBY8              	100.00%		H2QA70              	100.00%
                    	       		H2QVH0              	65.71%
                    	       		H2QDF9              	7.00%
Bootstrap support for Q5KBY8 as seed ortholog is 100%.
Bootstrap support for H2QA70 as seed ortholog is 100%.

Group of orthologs #1312. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:109

P0CO00              	100.00%		H2QUI9              	100.00%
                    	       		H2QPY3              	94.67%
Bootstrap support for P0CO00 as seed ortholog is 100%.
Bootstrap support for H2QUI9 as seed ortholog is 100%.

Group of orthologs #1313. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

Q5KH16              	100.00%		H2R4K6              	100.00%
                    	       		H2QSJ9              	59.54%
Bootstrap support for Q5KH16 as seed ortholog is 100%.
Bootstrap support for H2R4K6 as seed ortholog is 100%.

Group of orthologs #1314. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

Q5KCI8              	100.00%		Q6GVM3              	100.00%
                    	       		H2QYD9              	35.48%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for Q6GVM3 as seed ortholog is 100%.

Group of orthologs #1315. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

P0CQ50              	100.00%		H2Q889              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for H2Q889 as seed ortholog is 100%.

Group of orthologs #1316. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

Q5KCN6              	100.00%		H2QVE4              	100.00%
Bootstrap support for Q5KCN6 as seed ortholog is 100%.
Bootstrap support for H2QVE4 as seed ortholog is 100%.

Group of orthologs #1317. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.troglodytes:174

Q5KPF3              	100.00%		H2QJV6              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for H2QJV6 as seed ortholog is 100%.

Group of orthologs #1318. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

Q5KE38              	100.00%		H2QH56              	100.00%
                    	       		H2Q4A1              	27.22%
                    	       		H2QLX9              	19.60%
Bootstrap support for Q5KE38 as seed ortholog is 100%.
Bootstrap support for H2QH56 as seed ortholog is 100%.

Group of orthologs #1319. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

Q5KN51              	100.00%		H2R6J7              	100.00%
                    	       		H2RIF8              	75.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for H2R6J7 as seed ortholog is 100%.

Group of orthologs #1320. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

P0CQ12              	100.00%		G2HHM9              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for G2HHM9 as seed ortholog is 100%.

Group of orthologs #1321. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

P0CR76              	100.00%		H2PXU1              	100.00%
Bootstrap support for P0CR76 as seed ortholog is 100%.
Bootstrap support for H2PXU1 as seed ortholog is 100%.

Group of orthologs #1322. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

Q5K710              	100.00%		H2Q112              	100.00%
Bootstrap support for Q5K710 as seed ortholog is 100%.
Bootstrap support for H2Q112 as seed ortholog is 100%.

Group of orthologs #1323. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:89

Q5K6U2              	100.00%		H2Q7G6              	100.00%
Bootstrap support for Q5K6U2 as seed ortholog is 94%.
Bootstrap support for H2Q7G6 as seed ortholog is 99%.

Group of orthologs #1324. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

Q5K7I9              	100.00%		H2Q925              	100.00%
Bootstrap support for Q5K7I9 as seed ortholog is 100%.
Bootstrap support for H2Q925 as seed ortholog is 100%.

Group of orthologs #1325. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:73

Q5KNN5              	100.00%		H2Q8K7              	100.00%
Bootstrap support for Q5KNN5 as seed ortholog is 100%.
Bootstrap support for H2Q8K7 as seed ortholog is 96%.

Group of orthologs #1326. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:13

Q5KD12              	100.00%		H2QR77              	100.00%
Bootstrap support for Q5KD12 as seed ortholog is 99%.
Bootstrap support for H2QR77 as seed ortholog is 70%.
Alternative seed ortholog is H2R6T4 (13 bits away from this cluster)

Group of orthologs #1327. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.troglodytes:173

Q5KCL5              	100.00%		H2R5K5              	100.00%
Bootstrap support for Q5KCL5 as seed ortholog is 100%.
Bootstrap support for H2R5K5 as seed ortholog is 100%.

Group of orthologs #1328. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.troglodytes:35

P0CO02              	100.00%		H2PZV5              	100.00%
                    	       		H2R7J4              	100.00%
                    	       		H2R7K3              	100.00%
                    	       		H2R8P6              	100.00%
                    	       		H2RDL9              	100.00%
                    	       		H2QSI0              	97.33%
                    	       		H2QSF6              	97.33%
                    	       		H2RAX0              	97.33%
                    	       		H2RGZ6              	97.33%
                    	       		H2QSG3              	97.33%
                    	       		H2R8P8              	94.67%
                    	       		H2Q1A4              	93.33%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for H2PZV5 as seed ortholog is 99%.
Bootstrap support for H2R7J4 as seed ortholog is 99%.
Bootstrap support for H2R7K3 as seed ortholog is 99%.
Bootstrap support for H2R8P6 as seed ortholog is 98%.
Bootstrap support for H2RDL9 as seed ortholog is 97%.

Group of orthologs #1329. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.troglodytes:172

Q5K7G5              	100.00%		H2Q319              	100.00%
Bootstrap support for Q5K7G5 as seed ortholog is 100%.
Bootstrap support for H2Q319 as seed ortholog is 100%.

Group of orthologs #1330. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:43

Q5KCR3              	100.00%		H2QCU4              	100.00%
                    	       		H2QUG7              	23.20%
Bootstrap support for Q5KCR3 as seed ortholog is 75%.
Bootstrap support for H2QCU4 as seed ortholog is 68%.
Alternative seed ortholog is H2Q9S8 (43 bits away from this cluster)

Group of orthologs #1331. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:171

Q5KGD2              	100.00%		H2QFR4              	100.00%
Q5KID2              	24.54%		
Bootstrap support for Q5KGD2 as seed ortholog is 100%.
Bootstrap support for H2QFR4 as seed ortholog is 100%.

Group of orthologs #1332. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:53

Q5KJW2              	100.00%		G2HEI6              	100.00%
Bootstrap support for Q5KJW2 as seed ortholog is 97%.
Bootstrap support for G2HEI6 as seed ortholog is 97%.

Group of orthologs #1333. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:171

Q5KCC1              	100.00%		H2QAV7              	100.00%
Bootstrap support for Q5KCC1 as seed ortholog is 100%.
Bootstrap support for H2QAV7 as seed ortholog is 100%.

Group of orthologs #1334. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:171

Q5KKQ0              	100.00%		H2Q4X6              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for H2Q4X6 as seed ortholog is 100%.

Group of orthologs #1335. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:118

Q5KFS7              	100.00%		H2QRC8              	100.00%
Bootstrap support for Q5KFS7 as seed ortholog is 100%.
Bootstrap support for H2QRC8 as seed ortholog is 99%.

Group of orthologs #1336. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:171

Q5KBS5              	100.00%		H2R0B4              	100.00%
Bootstrap support for Q5KBS5 as seed ortholog is 100%.
Bootstrap support for H2R0B4 as seed ortholog is 100%.

Group of orthologs #1337. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:129

Q5KK99              	100.00%		H2QTR8              	100.00%
Bootstrap support for Q5KK99 as seed ortholog is 100%.
Bootstrap support for H2QTR8 as seed ortholog is 100%.

Group of orthologs #1338. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:30

Q5KKR2              	100.00%		H2QTD0              	100.00%
Bootstrap support for Q5KKR2 as seed ortholog is 100%.
Bootstrap support for H2QTD0 as seed ortholog is 70%.
Alternative seed ortholog is H2RB95 (30 bits away from this cluster)

Group of orthologs #1339. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.troglodytes:75

P0CL94              	100.00%		H2R9C5              	100.00%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for H2R9C5 as seed ortholog is 98%.

Group of orthologs #1340. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:170

Q5KGV6              	100.00%		G2HFR0              	100.00%
Bootstrap support for Q5KGV6 as seed ortholog is 100%.
Bootstrap support for G2HFR0 as seed ortholog is 100%.

Group of orthologs #1341. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:62

Q5KKH7              	100.00%		H2PY40              	100.00%
Bootstrap support for Q5KKH7 as seed ortholog is 97%.
Bootstrap support for H2PY40 as seed ortholog is 90%.

Group of orthologs #1342. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:170

Q5KPB1              	100.00%		H2PYR3              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for H2PYR3 as seed ortholog is 100%.

Group of orthologs #1343. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:106

Q5KIU3              	100.00%		H2Q4G0              	100.00%
Bootstrap support for Q5KIU3 as seed ortholog is 100%.
Bootstrap support for H2Q4G0 as seed ortholog is 99%.

Group of orthologs #1344. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:170

Q5KJ67              	100.00%		H2QKY5              	100.00%
Bootstrap support for Q5KJ67 as seed ortholog is 100%.
Bootstrap support for H2QKY5 as seed ortholog is 100%.

Group of orthologs #1345. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:170

Q5KNI6              	100.00%		H2QT09              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for H2QT09 as seed ortholog is 100%.

Group of orthologs #1346. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.troglodytes:170

Q5K7J3              	100.00%		H2RGX4              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for H2RGX4 as seed ortholog is 100%.

Group of orthologs #1347. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.troglodytes:100

Q5KHB9              	100.00%		H2Q7Z0              	100.00%
                    	       		H2QME2              	42.80%
Bootstrap support for Q5KHB9 as seed ortholog is 100%.
Bootstrap support for H2Q7Z0 as seed ortholog is 99%.

Group of orthologs #1348. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.troglodytes:169

Q5KAX8              	100.00%		H2Q9U5              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for H2Q9U5 as seed ortholog is 100%.

Group of orthologs #1349. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.troglodytes:168

P0CN52              	100.00%		H2QFB0              	100.00%
Bootstrap support for P0CN52 as seed ortholog is 100%.
Bootstrap support for H2QFB0 as seed ortholog is 100%.

Group of orthologs #1350. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.troglodytes:168

Q5KG24              	100.00%		H2QB71              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 100%.
Bootstrap support for H2QB71 as seed ortholog is 100%.

Group of orthologs #1351. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:168

Q5K9S1              	100.00%		H2QUI3              	100.00%
Bootstrap support for Q5K9S1 as seed ortholog is 99%.
Bootstrap support for H2QUI3 as seed ortholog is 100%.

Group of orthologs #1352. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.troglodytes:168

Q5KC23              	100.00%		H2QX00              	100.00%
Bootstrap support for Q5KC23 as seed ortholog is 100%.
Bootstrap support for H2QX00 as seed ortholog is 100%.

Group of orthologs #1353. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.troglodytes:168

Q5KAJ9              	100.00%		H2R0Q3              	100.00%
Bootstrap support for Q5KAJ9 as seed ortholog is 100%.
Bootstrap support for H2R0Q3 as seed ortholog is 100%.

Group of orthologs #1354. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.troglodytes:167

Q5KJP2              	100.00%		H2RHS4              	100.00%
                    	       		H2QRH5              	66.36%
                    	       		H2R9U3              	62.50%
Bootstrap support for Q5KJP2 as seed ortholog is 100%.
Bootstrap support for H2RHS4 as seed ortholog is 100%.

Group of orthologs #1355. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.troglodytes:167

Q5KEX0              	100.00%		H2R963              	100.00%
                    	       		H2RBA4              	25.89%
Bootstrap support for Q5KEX0 as seed ortholog is 100%.
Bootstrap support for H2R963 as seed ortholog is 100%.

Group of orthologs #1356. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.troglodytes:167

Q5KKX2              	100.00%		H2QBX7              	100.00%
Bootstrap support for Q5KKX2 as seed ortholog is 100%.
Bootstrap support for H2QBX7 as seed ortholog is 100%.

Group of orthologs #1357. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.troglodytes:167

Q5KNA8              	100.00%		H2QS72              	100.00%
Bootstrap support for Q5KNA8 as seed ortholog is 100%.
Bootstrap support for H2QS72 as seed ortholog is 100%.

Group of orthologs #1358. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.troglodytes:10

Q5K6W6              	100.00%		H2QDH9              	100.00%
                    	       		H2Q708              	56.21%
Bootstrap support for Q5K6W6 as seed ortholog is 100%.
Bootstrap support for H2QDH9 as seed ortholog is 93%.

Group of orthologs #1359. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.troglodytes:166

P0CM26              	100.00%		H2QFK1              	100.00%
                    	       		H2QTN4              	39.61%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for H2QFK1 as seed ortholog is 100%.

Group of orthologs #1360. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.troglodytes:166

Q5K7J1              	100.00%		H2PYE7              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for H2PYE7 as seed ortholog is 100%.

Group of orthologs #1361. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.troglodytes:166

Q5KAQ1              	100.00%		H2R0N9              	100.00%
Bootstrap support for Q5KAQ1 as seed ortholog is 100%.
Bootstrap support for H2R0N9 as seed ortholog is 100%.

Group of orthologs #1362. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:165

Q5KLM0              	100.00%		H2R923              	100.00%
                    	       		H2RED0              	42.67%
                    	       		H2QEF5              	38.40%
Bootstrap support for Q5KLM0 as seed ortholog is 100%.
Bootstrap support for H2R923 as seed ortholog is 100%.

Group of orthologs #1363. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:165

Q5K905              	100.00%		H2QSR0              	100.00%
                    	       		H2R617              	12.68%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for H2QSR0 as seed ortholog is 100%.

Group of orthologs #1364. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:2 P.troglodytes:165

Q5KJF0              	100.00%		H2QIC3              	100.00%
                    	       		H2QIE0              	97.68%
Bootstrap support for Q5KJF0 as seed ortholog is 54%.
Alternative seed ortholog is Q5KN08 (2 bits away from this cluster)
Bootstrap support for H2QIC3 as seed ortholog is 100%.

Group of orthologs #1365. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:165

Q5K8N6              	100.00%		H2QUI0              	100.00%
                    	       		H2Q2B9              	25.06%
Bootstrap support for Q5K8N6 as seed ortholog is 100%.
Bootstrap support for H2QUI0 as seed ortholog is 100%.

Group of orthologs #1366. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:165

Q5K9G2              	100.00%		H2R5H2              	100.00%
                    	       		H2Q3G2              	34.11%
Bootstrap support for Q5K9G2 as seed ortholog is 100%.
Bootstrap support for H2R5H2 as seed ortholog is 100%.

Group of orthologs #1367. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:165

Q5KN65              	100.00%		H2QD43              	100.00%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for H2QD43 as seed ortholog is 100%.

Group of orthologs #1368. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:53

Q5KGJ8              	100.00%		H2QMB4              	100.00%
Bootstrap support for Q5KGJ8 as seed ortholog is 100%.
Bootstrap support for H2QMB4 as seed ortholog is 98%.

Group of orthologs #1369. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.troglodytes:165

Q5KIJ6              	100.00%		H2RDP9              	100.00%
Bootstrap support for Q5KIJ6 as seed ortholog is 100%.
Bootstrap support for H2RDP9 as seed ortholog is 100%.

Group of orthologs #1370. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.troglodytes:164

Q5KL76              	100.00%		H2PXV9              	100.00%
Bootstrap support for Q5KL76 as seed ortholog is 100%.
Bootstrap support for H2PXV9 as seed ortholog is 100%.

Group of orthologs #1371. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.troglodytes:120

Q5KM24              	100.00%		G2HIC2              	100.00%
Bootstrap support for Q5KM24 as seed ortholog is 100%.
Bootstrap support for G2HIC2 as seed ortholog is 99%.

Group of orthologs #1372. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.troglodytes:164

Q5K9S4              	100.00%		H2QTG0              	100.00%
Bootstrap support for Q5K9S4 as seed ortholog is 100%.
Bootstrap support for H2QTG0 as seed ortholog is 100%.

Group of orthologs #1373. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.troglodytes:112

P0CS40              	100.00%		H2R2E5              	100.00%
Bootstrap support for P0CS40 as seed ortholog is 100%.
Bootstrap support for H2R2E5 as seed ortholog is 99%.

Group of orthologs #1374. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:164

Q5KDH7              	100.00%		H2R5D5              	100.00%
Bootstrap support for Q5KDH7 as seed ortholog is 93%.
Bootstrap support for H2R5D5 as seed ortholog is 100%.

Group of orthologs #1375. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:19 P.troglodytes:164

Q5KJ04              	100.00%		H2R0A3              	100.00%
Bootstrap support for Q5KJ04 as seed ortholog is 61%.
Alternative seed ortholog is Q5KC17 (19 bits away from this cluster)
Bootstrap support for H2R0A3 as seed ortholog is 100%.

Group of orthologs #1376. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.troglodytes:163

Q5KE51              	100.00%		H2R192              	100.00%
                    	       		H2PZN0              	32.22%
                    	       		H2Q0Y0              	31.10%
                    	       		H2PZN2              	24.54%
Bootstrap support for Q5KE51 as seed ortholog is 97%.
Bootstrap support for H2R192 as seed ortholog is 100%.

Group of orthologs #1377. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.troglodytes:163

Q5KET9              	100.00%		H2QV70              	100.00%
                    	       		H2RCF3              	12.14%
Bootstrap support for Q5KET9 as seed ortholog is 100%.
Bootstrap support for H2QV70 as seed ortholog is 100%.

Group of orthologs #1378. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.troglodytes:163

Q5KHV8              	100.00%		H2QUI6              	100.00%
                    	       		H2QS43              	65.89%
Bootstrap support for Q5KHV8 as seed ortholog is 99%.
Bootstrap support for H2QUI6 as seed ortholog is 100%.

Group of orthologs #1379. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.troglodytes:163

Q5KHU0              	100.00%		H2QWV6              	100.00%
Bootstrap support for Q5KHU0 as seed ortholog is 100%.
Bootstrap support for H2QWV6 as seed ortholog is 100%.

Group of orthologs #1380. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.troglodytes:163

Q5K7T3              	100.00%		H2R982              	100.00%
Bootstrap support for Q5K7T3 as seed ortholog is 100%.
Bootstrap support for H2R982 as seed ortholog is 100%.

Group of orthologs #1381. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:162

Q5KGD6              	100.00%		H2QW41              	100.00%
                    	       		H2PZ50              	51.35%
                    	       		H2RE25              	12.84%
Bootstrap support for Q5KGD6 as seed ortholog is 100%.
Bootstrap support for H2QW41 as seed ortholog is 100%.

Group of orthologs #1382. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:51 P.troglodytes:47

Q5KCL3              	100.00%		H2QBX3              	100.00%
                    	       		H2Q725              	41.77%
Bootstrap support for Q5KCL3 as seed ortholog is 87%.
Bootstrap support for H2QBX3 as seed ortholog is 85%.

Group of orthologs #1383. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:162

Q5KLT6              	100.00%		H2Q444              	100.00%
Bootstrap support for Q5KLT6 as seed ortholog is 100%.
Bootstrap support for H2Q444 as seed ortholog is 100%.

Group of orthologs #1384. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:162

Q5KKD0              	100.00%		H2QLX4              	100.00%
Bootstrap support for Q5KKD0 as seed ortholog is 100%.
Bootstrap support for H2QLX4 as seed ortholog is 100%.

Group of orthologs #1385. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:162

Q5KMT0              	100.00%		H2QQP1              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for H2QQP1 as seed ortholog is 100%.

Group of orthologs #1386. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.troglodytes:162

Q5KD76              	100.00%		H2R901              	100.00%
Bootstrap support for Q5KD76 as seed ortholog is 100%.
Bootstrap support for H2R901 as seed ortholog is 100%.

Group of orthologs #1387. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.troglodytes:57

Q5K9E7              	100.00%		G2HHC5              	100.00%
Q5KEY5              	12.58%		
Bootstrap support for Q5K9E7 as seed ortholog is 77%.
Bootstrap support for G2HHC5 as seed ortholog is 89%.

Group of orthologs #1388. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:161

Q5KDK1              	100.00%		H2QBH4              	100.00%
                    	       		H2QEM7              	48.47%
Bootstrap support for Q5KDK1 as seed ortholog is 100%.
Bootstrap support for H2QBH4 as seed ortholog is 100%.

Group of orthologs #1389. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:161

Q5KPH8              	100.00%		H2QEX4              	100.00%
                    	       		H2R2X7              	100.00%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for H2QEX4 as seed ortholog is 100%.
Bootstrap support for H2R2X7 as seed ortholog is 100%.

Group of orthologs #1390. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:161

Q5KBB3              	100.00%		H2R2N2              	100.00%
                    	       		H2Q5B1              	39.72%
Bootstrap support for Q5KBB3 as seed ortholog is 100%.
Bootstrap support for H2R2N2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:161

Q5KL21              	100.00%		H2PXW4              	100.00%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for H2PXW4 as seed ortholog is 100%.

Group of orthologs #1392. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:113

Q5K8H3              	100.00%		H2QKS2              	100.00%
Bootstrap support for Q5K8H3 as seed ortholog is 100%.
Bootstrap support for H2QKS2 as seed ortholog is 99%.

Group of orthologs #1393. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:161

Q5KLB0              	100.00%		H2QCV0              	100.00%
Bootstrap support for Q5KLB0 as seed ortholog is 100%.
Bootstrap support for H2QCV0 as seed ortholog is 100%.

Group of orthologs #1394. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:110

Q5KMC4              	100.00%		H2QK09              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for H2QK09 as seed ortholog is 99%.

Group of orthologs #1395. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:42

Q5KP11              	100.00%		H2QJL2              	100.00%
Bootstrap support for Q5KP11 as seed ortholog is 95%.
Bootstrap support for H2QJL2 as seed ortholog is 68%.
Alternative seed ortholog is H2R5B8 (42 bits away from this cluster)

Group of orthologs #1396. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.troglodytes:161

Q5KB29              	100.00%		H2R941              	100.00%
Bootstrap support for Q5KB29 as seed ortholog is 100%.
Bootstrap support for H2R941 as seed ortholog is 100%.

Group of orthologs #1397. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:98

Q5KN56              	100.00%		H2QW16              	100.00%
Q5K6U5              	14.16%		H2RBP3              	46.37%
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for H2QW16 as seed ortholog is 99%.

Group of orthologs #1398. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5KBG5              	100.00%		H2Q0W3              	100.00%
                    	       		H2RFH9              	15.10%
Bootstrap support for Q5KBG5 as seed ortholog is 100%.
Bootstrap support for H2Q0W3 as seed ortholog is 100%.

Group of orthologs #1399. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:17

Q5KLL8              	100.00%		H2Q8L1              	100.00%
                    	       		H2QZG6              	31.74%
Bootstrap support for Q5KLL8 as seed ortholog is 100%.
Bootstrap support for H2Q8L1 as seed ortholog is 62%.
Alternative seed ortholog is H2R7I1 (17 bits away from this cluster)

Group of orthologs #1400. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5KEC3              	100.00%		H2QB47              	100.00%
Bootstrap support for Q5KEC3 as seed ortholog is 100%.
Bootstrap support for H2QB47 as seed ortholog is 100%.

Group of orthologs #1401. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5KDT1              	100.00%		H2QCL4              	100.00%
Bootstrap support for Q5KDT1 as seed ortholog is 100%.
Bootstrap support for H2QCL4 as seed ortholog is 100%.

Group of orthologs #1402. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5K8W2              	100.00%		H2QP16              	100.00%
Bootstrap support for Q5K8W2 as seed ortholog is 100%.
Bootstrap support for H2QP16 as seed ortholog is 100%.

Group of orthologs #1403. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5KLJ6              	100.00%		H2QC81              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for H2QC81 as seed ortholog is 100%.

Group of orthologs #1404. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5KMJ7              	100.00%		H2QJ47              	100.00%
Bootstrap support for Q5KMJ7 as seed ortholog is 100%.
Bootstrap support for H2QJ47 as seed ortholog is 100%.

Group of orthologs #1405. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:94

Q5KGI4              	100.00%		H2QYQ5              	100.00%
Bootstrap support for Q5KGI4 as seed ortholog is 100%.
Bootstrap support for H2QYQ5 as seed ortholog is 99%.

Group of orthologs #1406. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.troglodytes:160

Q5KAE9              	100.00%		H2RBJ1              	100.00%
Bootstrap support for Q5KAE9 as seed ortholog is 100%.
Bootstrap support for H2RBJ1 as seed ortholog is 100%.

Group of orthologs #1407. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:159

P0CP16              	100.00%		H2QE73              	100.00%
Bootstrap support for P0CP16 as seed ortholog is 100%.
Bootstrap support for H2QE73 as seed ortholog is 100%.

Group of orthologs #1408. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:10 P.troglodytes:43

Q5K705              	100.00%		H2QDF1              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 56%.
Alternative seed ortholog is Q5KH65 (10 bits away from this cluster)
Bootstrap support for H2QDF1 as seed ortholog is 79%.

Group of orthologs #1409. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:159

Q5KHK0              	100.00%		H2QCD5              	100.00%
Bootstrap support for Q5KHK0 as seed ortholog is 100%.
Bootstrap support for H2QCD5 as seed ortholog is 100%.

Group of orthologs #1410. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:159

Q5KLL5              	100.00%		H2QDG8              	100.00%
Bootstrap support for Q5KLL5 as seed ortholog is 100%.
Bootstrap support for H2QDG8 as seed ortholog is 100%.

Group of orthologs #1411. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:159

Q5KPP8              	100.00%		H2QIH4              	100.00%
Bootstrap support for Q5KPP8 as seed ortholog is 100%.
Bootstrap support for H2QIH4 as seed ortholog is 100%.

Group of orthologs #1412. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.troglodytes:159

Q5KHZ1              	100.00%		H2R816              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for H2R816 as seed ortholog is 100%.

Group of orthologs #1413. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.troglodytes:158

P0CR82              	100.00%		A5A6K2              	100.00%
                    	       		H2RGA0              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for A5A6K2 as seed ortholog is 100%.
Bootstrap support for H2RGA0 as seed ortholog is 100%.

Group of orthologs #1414. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.troglodytes:57

Q5K766              	100.00%		H2QLD0              	100.00%
                    	       		H2QC05              	56.62%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for H2QLD0 as seed ortholog is 97%.

Group of orthologs #1415. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.troglodytes:158

P0CP08              	100.00%		H2QR25              	100.00%
                    	       		H2PZ10              	36.80%
Bootstrap support for P0CP08 as seed ortholog is 100%.
Bootstrap support for H2QR25 as seed ortholog is 100%.

Group of orthologs #1416. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.troglodytes:158

Q5KPC0              	100.00%		G2HF13              	100.00%
Bootstrap support for Q5KPC0 as seed ortholog is 100%.
Bootstrap support for G2HF13 as seed ortholog is 100%.

Group of orthologs #1417. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.troglodytes:33

Q5KFL6              	100.00%		H2QBA5              	100.00%
Bootstrap support for Q5KFL6 as seed ortholog is 100%.
Bootstrap support for H2QBA5 as seed ortholog is 93%.

Group of orthologs #1418. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.troglodytes:62

Q5KLV6              	100.00%		H2QTB6              	100.00%
Bootstrap support for Q5KLV6 as seed ortholog is 100%.
Bootstrap support for H2QTB6 as seed ortholog is 93%.

Group of orthologs #1419. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.troglodytes:157

Q5KG53              	100.00%		H2QGT3              	100.00%
Q5KEM9              	8.49%		
Q5KLC1              	8.49%		
Q5KFZ8              	7.87%		
Bootstrap support for Q5KG53 as seed ortholog is 90%.
Bootstrap support for H2QGT3 as seed ortholog is 100%.

Group of orthologs #1420. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.troglodytes:157

Q5K7C8              	100.00%		H2Q1M2              	100.00%
Bootstrap support for Q5K7C8 as seed ortholog is 100%.
Bootstrap support for H2Q1M2 as seed ortholog is 100%.

Group of orthologs #1421. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.troglodytes:48

P0CP96              	100.00%		H2Q3Z2              	100.00%
Bootstrap support for P0CP96 as seed ortholog is 100%.
Bootstrap support for H2Q3Z2 as seed ortholog is 98%.

Group of orthologs #1422. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.troglodytes:157

P0CO36              	100.00%		H2QNB8              	100.00%
Bootstrap support for P0CO36 as seed ortholog is 100%.
Bootstrap support for H2QNB8 as seed ortholog is 100%.

Group of orthologs #1423. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.troglodytes:78

Q5KNG9              	100.00%		H2Q8X4              	100.00%
                    	       		H2Q430              	11.95%
                    	       		H2Q8X5              	8.19%
                    	       		H2QRJ1              	7.08%
Bootstrap support for Q5KNG9 as seed ortholog is 86%.
Bootstrap support for H2Q8X4 as seed ortholog is 97%.

Group of orthologs #1424. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:156

Q5KAU4              	100.00%		H2QA06              	100.00%
                    	       		H2QEL3              	26.47%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for H2QA06 as seed ortholog is 100%.

Group of orthologs #1425. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:156

Q5KKT8              	100.00%		H2QG79              	100.00%
                    	       		H2Q462              	33.83%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for H2QG79 as seed ortholog is 100%.

Group of orthologs #1426. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:105

Q5KA76              	100.00%		H2QC48              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for H2QC48 as seed ortholog is 99%.

Group of orthologs #1427. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:156

Q5KFQ4              	100.00%		H2Q8E9              	100.00%
Bootstrap support for Q5KFQ4 as seed ortholog is 100%.
Bootstrap support for H2Q8E9 as seed ortholog is 100%.

Group of orthologs #1428. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:156

Q5KL46              	100.00%		H2QL05              	100.00%
Bootstrap support for Q5KL46 as seed ortholog is 100%.
Bootstrap support for H2QL05 as seed ortholog is 100%.

Group of orthologs #1429. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:156

Q5KDX1              	100.00%		H2QVA1              	100.00%
Bootstrap support for Q5KDX1 as seed ortholog is 100%.
Bootstrap support for H2QVA1 as seed ortholog is 100%.

Group of orthologs #1430. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.troglodytes:30

Q5KAU6              	100.00%		H2QZ92              	100.00%
Bootstrap support for Q5KAU6 as seed ortholog is 100%.
Bootstrap support for H2QZ92 as seed ortholog is 65%.
Alternative seed ortholog is H2QBL1 (30 bits away from this cluster)

Group of orthologs #1431. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.troglodytes:60

Q5KBA9              	100.00%		H2R4J6              	100.00%
Bootstrap support for Q5KBA9 as seed ortholog is 100%.
Bootstrap support for H2R4J6 as seed ortholog is 100%.

Group of orthologs #1432. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:155

Q5KIH1              	100.00%		H2R2Q6              	100.00%
                    	       		H2QKF3              	38.46%
Bootstrap support for Q5KIH1 as seed ortholog is 100%.
Bootstrap support for H2R2Q6 as seed ortholog is 100%.

Group of orthologs #1433. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:31

Q5KDG7              	100.00%		H2Q6E8              	100.00%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for H2Q6E8 as seed ortholog is 84%.

Group of orthologs #1434. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:155

Q5KCH8              	100.00%		H2QDB2              	100.00%
Bootstrap support for Q5KCH8 as seed ortholog is 100%.
Bootstrap support for H2QDB2 as seed ortholog is 100%.

Group of orthologs #1435. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:17 P.troglodytes:50

Q5KKM2              	100.00%		H2Q873              	100.00%
Bootstrap support for Q5KKM2 as seed ortholog is 68%.
Alternative seed ortholog is Q5KGS0 (17 bits away from this cluster)
Bootstrap support for H2Q873 as seed ortholog is 90%.

Group of orthologs #1436. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:155

Q5KFJ2              	100.00%		H2QDM8              	100.00%
Bootstrap support for Q5KFJ2 as seed ortholog is 100%.
Bootstrap support for H2QDM8 as seed ortholog is 100%.

Group of orthologs #1437. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:48

Q5KGG8              	100.00%		H2QT29              	100.00%
Bootstrap support for Q5KGG8 as seed ortholog is 100%.
Bootstrap support for H2QT29 as seed ortholog is 85%.

Group of orthologs #1438. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:155

Q5KKY5              	100.00%		H2QW67              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for H2QW67 as seed ortholog is 100%.

Group of orthologs #1439. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.troglodytes:155

Q5KKK1              	100.00%		H2R446              	100.00%
Bootstrap support for Q5KKK1 as seed ortholog is 100%.
Bootstrap support for H2R446 as seed ortholog is 100%.

Group of orthologs #1440. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.troglodytes:154

Q5KIC1              	100.00%		H2PY37              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for H2PY37 as seed ortholog is 100%.

Group of orthologs #1441. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.troglodytes:154

Q5KM44              	100.00%		H2QGL7              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for H2QGL7 as seed ortholog is 100%.

Group of orthologs #1442. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.troglodytes:154

Q5KNT0              	100.00%		H2QHV3              	100.00%
Bootstrap support for Q5KNT0 as seed ortholog is 100%.
Bootstrap support for H2QHV3 as seed ortholog is 100%.

Group of orthologs #1443. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.troglodytes:69

Q5KAW2              	100.00%		H2RDN6              	100.00%
                    	       		H2R391              	55.78%
                    	       		H2QI21              	45.92%
                    	       		H2QMQ5              	25.17%
Bootstrap support for Q5KAW2 as seed ortholog is 100%.
Bootstrap support for H2RDN6 as seed ortholog is 96%.

Group of orthologs #1444. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.troglodytes:153

Q5K6U7              	100.00%		H2Q180              	100.00%
Bootstrap support for Q5K6U7 as seed ortholog is 100%.
Bootstrap support for H2Q180 as seed ortholog is 100%.

Group of orthologs #1445. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.troglodytes:153

Q5KE79              	100.00%		H2QKF7              	100.00%
Bootstrap support for Q5KE79 as seed ortholog is 100%.
Bootstrap support for H2QKF7 as seed ortholog is 100%.

Group of orthologs #1446. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.troglodytes:153

Q5KDQ5              	100.00%		H2RDP6              	100.00%
Bootstrap support for Q5KDQ5 as seed ortholog is 100%.
Bootstrap support for H2RDP6 as seed ortholog is 100%.

Group of orthologs #1447. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 P.troglodytes:152

Q5KP23              	100.00%		H2PY52              	100.00%
                    	       		H2QZF1              	40.59%
Bootstrap support for Q5KP23 as seed ortholog is 100%.
Bootstrap support for H2PY52 as seed ortholog is 100%.

Group of orthologs #1448. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.troglodytes:109

Q5KP56              	100.00%		H2QBA2              	100.00%
                    	       		H2RBM0              	38.29%
Bootstrap support for Q5KP56 as seed ortholog is 95%.
Bootstrap support for H2QBA2 as seed ortholog is 99%.

Group of orthologs #1449. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 P.troglodytes:152

P0CP72              	100.00%		H2QKI7              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for H2QKI7 as seed ortholog is 100%.

Group of orthologs #1450. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 P.troglodytes:152

P0CR92              	100.00%		H2R1D2              	100.00%
Bootstrap support for P0CR92 as seed ortholog is 100%.
Bootstrap support for H2R1D2 as seed ortholog is 100%.

Group of orthologs #1451. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 P.troglodytes:152

Q5KIH4              	100.00%		H2QZQ5              	100.00%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for H2QZQ5 as seed ortholog is 100%.

Group of orthologs #1452. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 P.troglodytes:152

Q5K9M5              	100.00%		H2RCP2              	100.00%
Bootstrap support for Q5K9M5 as seed ortholog is 100%.
Bootstrap support for H2RCP2 as seed ortholog is 100%.

Group of orthologs #1453. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:98

Q5KLA5              	100.00%		H2RF87              	100.00%
Bootstrap support for Q5KLA5 as seed ortholog is 97%.
Bootstrap support for H2RF87 as seed ortholog is 99%.

Group of orthologs #1454. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:31 P.troglodytes:70

P0CR78              	100.00%		H2Q1P5              	100.00%
                    	       		H2R6H2              	43.85%
Bootstrap support for P0CR78 as seed ortholog is 98%.
Bootstrap support for H2Q1P5 as seed ortholog is 97%.

Group of orthologs #1455. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:59

Q5KD55              	100.00%		H2QUV9              	100.00%
                    	       		H2QD69              	36.55%
Bootstrap support for Q5KD55 as seed ortholog is 94%.
Bootstrap support for H2QUV9 as seed ortholog is 92%.

Group of orthologs #1456. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.troglodytes:85

Q5KQ08              	100.00%		H2PYR6              	100.00%
Bootstrap support for Q5KQ08 as seed ortholog is 100%.
Bootstrap support for H2PYR6 as seed ortholog is 98%.

Group of orthologs #1457. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.troglodytes:104

Q5KLP3              	100.00%		H2Q806              	100.00%
Bootstrap support for Q5KLP3 as seed ortholog is 99%.
Bootstrap support for H2Q806 as seed ortholog is 100%.

Group of orthologs #1458. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.troglodytes:151

P0CO98              	100.00%		H2R360              	100.00%
Bootstrap support for P0CO98 as seed ortholog is 100%.
Bootstrap support for H2R360 as seed ortholog is 100%.

Group of orthologs #1459. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.troglodytes:151

Q5KIK2              	100.00%		H2QXA5              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for H2QXA5 as seed ortholog is 100%.

Group of orthologs #1460. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.troglodytes:67

Q5KGP8              	100.00%		H2R9F7              	100.00%
Bootstrap support for Q5KGP8 as seed ortholog is 100%.
Bootstrap support for H2R9F7 as seed ortholog is 97%.

Group of orthologs #1461. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:70

P0CR34              	100.00%		H2Q3G0              	100.00%
                    	       		H2QBM0              	17.03%
                    	       		H2QXI5              	13.58%
Bootstrap support for P0CR34 as seed ortholog is 99%.
Bootstrap support for H2Q3G0 as seed ortholog is 98%.

Group of orthologs #1462. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.troglodytes:37

Q5KAK0              	100.00%		H2QBZ1              	100.00%
                    	       		H2R067              	8.47%
                    	       		H2QE30              	5.93%
Bootstrap support for Q5KAK0 as seed ortholog is 88%.
Bootstrap support for H2QBZ1 as seed ortholog is 88%.

Group of orthologs #1463. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KLY7              	100.00%		H2Q3U8              	100.00%
                    	       		H2Q3U9              	57.79%
                    	       		H2R2R9              	55.53%
Bootstrap support for Q5KLY7 as seed ortholog is 100%.
Bootstrap support for H2Q3U8 as seed ortholog is 100%.

Group of orthologs #1464. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KI55              	100.00%		H2QAM4              	100.00%
                    	       		H2RB14              	53.90%
Bootstrap support for Q5KI55 as seed ortholog is 100%.
Bootstrap support for H2QAM4 as seed ortholog is 100%.

Group of orthologs #1465. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KFS4              	100.00%		H2QWU6              	100.00%
                    	       		H2R2L7              	16.46%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for H2QWU6 as seed ortholog is 100%.

Group of orthologs #1466. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.troglodytes:32

Q5KLY1              	100.00%		H2RG75              	100.00%
                    	       		H2Q5U7              	24.29%
Bootstrap support for Q5KLY1 as seed ortholog is 93%.
Bootstrap support for H2RG75 as seed ortholog is 98%.

Group of orthologs #1467. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5K9N6              	100.00%		H2Q2T8              	100.00%
Bootstrap support for Q5K9N6 as seed ortholog is 100%.
Bootstrap support for H2Q2T8 as seed ortholog is 100%.

Group of orthologs #1468. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KDS7              	100.00%		H2Q0U5              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 100%.
Bootstrap support for H2Q0U5 as seed ortholog is 100%.

Group of orthologs #1469. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:76

Q5KIP7              	100.00%		H2Q7S6              	100.00%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for H2Q7S6 as seed ortholog is 97%.

Group of orthologs #1470. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5K864              	100.00%		H2QID0              	100.00%
Bootstrap support for Q5K864 as seed ortholog is 100%.
Bootstrap support for H2QID0 as seed ortholog is 100%.

Group of orthologs #1471. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KPH7              	100.00%		H2Q4T6              	100.00%
Bootstrap support for Q5KPH7 as seed ortholog is 100%.
Bootstrap support for H2Q4T6 as seed ortholog is 100%.

Group of orthologs #1472. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KIZ4              	100.00%		H2QAN4              	100.00%
Bootstrap support for Q5KIZ4 as seed ortholog is 100%.
Bootstrap support for H2QAN4 as seed ortholog is 100%.

Group of orthologs #1473. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KCK4              	100.00%		H2QKM8              	100.00%
Bootstrap support for Q5KCK4 as seed ortholog is 100%.
Bootstrap support for H2QKM8 as seed ortholog is 100%.

Group of orthologs #1474. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:150

Q5KG66              	100.00%		H2QPH8              	100.00%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for H2QPH8 as seed ortholog is 100%.

Group of orthologs #1475. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.troglodytes:66

Q5KKM7              	100.00%		H2R4G2              	100.00%
Bootstrap support for Q5KKM7 as seed ortholog is 100%.
Bootstrap support for H2R4G2 as seed ortholog is 85%.

Group of orthologs #1476. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.troglodytes:149

Q5KI19              	100.00%		H2R5Z7              	100.00%
                    	       		H2Q8X9              	37.80%
Bootstrap support for Q5KI19 as seed ortholog is 100%.
Bootstrap support for H2R5Z7 as seed ortholog is 100%.

Group of orthologs #1477. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.troglodytes:149

Q5KCP3              	100.00%		H2Q674              	100.00%
Bootstrap support for Q5KCP3 as seed ortholog is 100%.
Bootstrap support for H2Q674 as seed ortholog is 100%.

Group of orthologs #1478. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.troglodytes:149

Q5K7U3              	100.00%		H2QJX9              	100.00%
Bootstrap support for Q5K7U3 as seed ortholog is 100%.
Bootstrap support for H2QJX9 as seed ortholog is 100%.

Group of orthologs #1479. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.troglodytes:149

Q5KJL6              	100.00%		H2QGF0              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for H2QGF0 as seed ortholog is 100%.

Group of orthologs #1480. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.troglodytes:149

Q5KJB4              	100.00%		H2QIL3              	100.00%
Bootstrap support for Q5KJB4 as seed ortholog is 100%.
Bootstrap support for H2QIL3 as seed ortholog is 100%.

Group of orthologs #1481. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.troglodytes:149

Q5KBW1              	100.00%		H2QVK3              	100.00%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for H2QVK3 as seed ortholog is 100%.

Group of orthologs #1482. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:10

P0CO54              	100.00%		H2QC26              	100.00%
                    	       		H2RF03              	62.37%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for H2QC26 as seed ortholog is 75%.

Group of orthologs #1483. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:97

Q5KDH4              	100.00%		H2Q706              	100.00%
Bootstrap support for Q5KDH4 as seed ortholog is 98%.
Bootstrap support for H2Q706 as seed ortholog is 99%.

Group of orthologs #1484. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KJ57              	100.00%		H2Q715              	100.00%
Bootstrap support for Q5KJ57 as seed ortholog is 100%.
Bootstrap support for H2Q715 as seed ortholog is 100%.

Group of orthologs #1485. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KHX0              	100.00%		H2QBQ7              	100.00%
Bootstrap support for Q5KHX0 as seed ortholog is 100%.
Bootstrap support for H2QBQ7 as seed ortholog is 100%.

Group of orthologs #1486. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KFR5              	100.00%		H2QHC8              	100.00%
Bootstrap support for Q5KFR5 as seed ortholog is 100%.
Bootstrap support for H2QHC8 as seed ortholog is 100%.

Group of orthologs #1487. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KD43              	100.00%		H2QV45              	100.00%
Bootstrap support for Q5KD43 as seed ortholog is 100%.
Bootstrap support for H2QV45 as seed ortholog is 100%.

Group of orthologs #1488. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:53

Q5KM35              	100.00%		H2QLR9              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 99%.
Bootstrap support for H2QLR9 as seed ortholog is 99%.

Group of orthologs #1489. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KM54              	100.00%		H2QM07              	100.00%
Bootstrap support for Q5KM54 as seed ortholog is 100%.
Bootstrap support for H2QM07 as seed ortholog is 100%.

Group of orthologs #1490. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KLS8              	100.00%		H2QR11              	100.00%
Bootstrap support for Q5KLS8 as seed ortholog is 100%.
Bootstrap support for H2QR11 as seed ortholog is 100%.

Group of orthologs #1491. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5K7S5              	100.00%		H2R8E7              	100.00%
Bootstrap support for Q5K7S5 as seed ortholog is 100%.
Bootstrap support for H2R8E7 as seed ortholog is 100%.

Group of orthologs #1492. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.troglodytes:148

Q5KFJ5              	100.00%		H2R363              	100.00%
Bootstrap support for Q5KFJ5 as seed ortholog is 100%.
Bootstrap support for H2R363 as seed ortholog is 100%.

Group of orthologs #1493. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:147

Q5KFL1              	100.00%		H2Q2S9              	100.00%
                    	       		H2QVX6              	75.55%
                    	       		H2RC76              	69.78%
                    	       		H2RDF9              	68.29%
                    	       		H2QWJ9              	42.54%
                    	       		H2R8X1              	41.15%
Bootstrap support for Q5KFL1 as seed ortholog is 96%.
Bootstrap support for H2Q2S9 as seed ortholog is 100%.

Group of orthologs #1494. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 P.troglodytes:147

P0CQ26              	100.00%		H2Q6D0              	100.00%
Bootstrap support for P0CQ26 as seed ortholog is 100%.
Bootstrap support for H2Q6D0 as seed ortholog is 100%.

Group of orthologs #1495. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:147

Q5KJ65              	100.00%		H2Q9T6              	100.00%
Bootstrap support for Q5KJ65 as seed ortholog is 93%.
Bootstrap support for H2Q9T6 as seed ortholog is 100%.

Group of orthologs #1496. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 P.troglodytes:147

Q5KAR1              	100.00%		H2QJ67              	100.00%
Bootstrap support for Q5KAR1 as seed ortholog is 100%.
Bootstrap support for H2QJ67 as seed ortholog is 100%.

Group of orthologs #1497. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 P.troglodytes:147

Q5KP95              	100.00%		H2RAT7              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for H2RAT7 as seed ortholog is 100%.

Group of orthologs #1498. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:103

Q5KFR2              	100.00%		H2QKK2              	100.00%
                    	       		H2RE03              	98.10%
                    	       		H2QW50              	77.85%
Bootstrap support for Q5KFR2 as seed ortholog is 100%.
Bootstrap support for H2QKK2 as seed ortholog is 99%.

Group of orthologs #1499. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:19 P.troglodytes:146

Q5KJC7              	100.00%		H2PZU9              	100.00%
                    	       		Q8HZ70              	53.26%
Bootstrap support for Q5KJC7 as seed ortholog is 67%.
Alternative seed ortholog is Q5KNU9 (19 bits away from this cluster)
Bootstrap support for H2PZU9 as seed ortholog is 100%.

Group of orthologs #1500. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

Q5KKG2              	100.00%		H2QWC6              	100.00%
                    	       		H2QE97              	34.29%
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for H2QWC6 as seed ortholog is 100%.

Group of orthologs #1501. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

P0CN62              	100.00%		H2Q1C6              	100.00%
Bootstrap support for P0CN62 as seed ortholog is 100%.
Bootstrap support for H2Q1C6 as seed ortholog is 100%.

Group of orthologs #1502. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

Q5KBV9              	100.00%		H2Q2P0              	100.00%
Bootstrap support for Q5KBV9 as seed ortholog is 100%.
Bootstrap support for H2Q2P0 as seed ortholog is 100%.

Group of orthologs #1503. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:30

Q5KQ34              	100.00%		G2HJ20              	100.00%
Bootstrap support for Q5KQ34 as seed ortholog is 100%.
Bootstrap support for G2HJ20 as seed ortholog is 77%.

Group of orthologs #1504. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

Q5KAN9              	100.00%		H2QM26              	100.00%
Bootstrap support for Q5KAN9 as seed ortholog is 100%.
Bootstrap support for H2QM26 as seed ortholog is 100%.

Group of orthologs #1505. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:146

Q5KFU2              	100.00%		H2QTU8              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 99%.
Bootstrap support for H2QTU8 as seed ortholog is 100%.

Group of orthologs #1506. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

Q5KPM8              	100.00%		H2QWH3              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for H2QWH3 as seed ortholog is 100%.

Group of orthologs #1507. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

Q5KIC8              	100.00%		H2R9B1              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for H2R9B1 as seed ortholog is 100%.

Group of orthologs #1508. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.troglodytes:146

Q5KNC7              	100.00%		P99998              	100.00%
Bootstrap support for Q5KNC7 as seed ortholog is 100%.
Bootstrap support for P99998 as seed ortholog is 100%.

Group of orthologs #1509. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:83

Q5K778              	100.00%		H2Q743              	100.00%
                    	       		H2QUR3              	26.49%
Bootstrap support for Q5K778 as seed ortholog is 100%.
Bootstrap support for H2Q743 as seed ortholog is 60%.
Alternative seed ortholog is H2Q605 (83 bits away from this cluster)

Group of orthologs #1510. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:145

Q5KA81              	100.00%		H2RDT2              	100.00%
                    	       		H2Q917              	92.56%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for H2RDT2 as seed ortholog is 100%.

Group of orthologs #1511. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:63

Q5KEP7              	100.00%		H2PYH2              	100.00%
Bootstrap support for Q5KEP7 as seed ortholog is 100%.
Bootstrap support for H2PYH2 as seed ortholog is 95%.

Group of orthologs #1512. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:145

Q5KGK3              	100.00%		H2QEJ5              	100.00%
Bootstrap support for Q5KGK3 as seed ortholog is 100%.
Bootstrap support for H2QEJ5 as seed ortholog is 100%.

Group of orthologs #1513. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:145

Q5KK70              	100.00%		H2QD83              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for H2QD83 as seed ortholog is 100%.

Group of orthologs #1514. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.troglodytes:145

Q5KKJ8              	100.00%		H2QX99              	100.00%
Bootstrap support for Q5KKJ8 as seed ortholog is 100%.
Bootstrap support for H2QX99 as seed ortholog is 100%.

Group of orthologs #1515. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:81

P0CR54              	100.00%		H2QK75              	100.00%
                    	       		H2QWC8              	45.89%
Bootstrap support for P0CR54 as seed ortholog is 100%.
Bootstrap support for H2QK75 as seed ortholog is 99%.

Group of orthologs #1516. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:144

Q5KJZ4              	100.00%		H2QW25              	100.00%
                    	       		H2QW24              	29.00%
Bootstrap support for Q5KJZ4 as seed ortholog is 100%.
Bootstrap support for H2QW25 as seed ortholog is 100%.

Group of orthologs #1517. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:144

Q5KP38              	100.00%		H2QBF5              	100.00%
Bootstrap support for Q5KP38 as seed ortholog is 100%.
Bootstrap support for H2QBF5 as seed ortholog is 100%.

Group of orthologs #1518. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:144

Q5KMX2              	100.00%		H2QEB7              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 100%.
Bootstrap support for H2QEB7 as seed ortholog is 100%.

Group of orthologs #1519. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:144

Q5KB67              	100.00%		H2QSX9              	100.00%
Bootstrap support for Q5KB67 as seed ortholog is 100%.
Bootstrap support for H2QSX9 as seed ortholog is 100%.

Group of orthologs #1520. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.troglodytes:144

Q5KDF1              	100.00%		H2QVR0              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for H2QVR0 as seed ortholog is 100%.

Group of orthologs #1521. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

P0CP94              	100.00%		H2QJT5              	100.00%
                    	       		H2QHI6              	65.85%
Bootstrap support for P0CP94 as seed ortholog is 100%.
Bootstrap support for H2QJT5 as seed ortholog is 100%.

Group of orthologs #1522. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

P0CM98              	100.00%		G2HFZ2              	100.00%
Bootstrap support for P0CM98 as seed ortholog is 100%.
Bootstrap support for G2HFZ2 as seed ortholog is 100%.

Group of orthologs #1523. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:48

Q5KH96              	100.00%		H2Q2C8              	100.00%
Bootstrap support for Q5KH96 as seed ortholog is 100%.
Bootstrap support for H2Q2C8 as seed ortholog is 92%.

Group of orthologs #1524. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

Q5KFE4              	100.00%		H2QCI0              	100.00%
Bootstrap support for Q5KFE4 as seed ortholog is 100%.
Bootstrap support for H2QCI0 as seed ortholog is 100%.

Group of orthologs #1525. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

Q5KFA1              	100.00%		H2QM15              	100.00%
Bootstrap support for Q5KFA1 as seed ortholog is 100%.
Bootstrap support for H2QM15 as seed ortholog is 100%.

Group of orthologs #1526. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

Q5KMC3              	100.00%		H2QG82              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for H2QG82 as seed ortholog is 100%.

Group of orthologs #1527. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

Q5KI17              	100.00%		H2R1S7              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for H2R1S7 as seed ortholog is 100%.

Group of orthologs #1528. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

Q5KI23              	100.00%		H2R1R8              	100.00%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for H2R1R8 as seed ortholog is 100%.

Group of orthologs #1529. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.troglodytes:143

Q5KN73              	100.00%		H2QXW0              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for H2QXW0 as seed ortholog is 100%.

Group of orthologs #1530. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:46

Q5KKY6              	100.00%		H2R3M0              	100.00%
                    	       		H2QSC6              	8.25%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for H2R3M0 as seed ortholog is 92%.

Group of orthologs #1531. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:142

Q5KM13              	100.00%		H2PY71              	100.00%
Bootstrap support for Q5KM13 as seed ortholog is 94%.
Bootstrap support for H2PY71 as seed ortholog is 100%.

Group of orthologs #1532. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:142

Q5KJL8              	100.00%		H2Q2F1              	100.00%
Bootstrap support for Q5KJL8 as seed ortholog is 100%.
Bootstrap support for H2Q2F1 as seed ortholog is 100%.

Group of orthologs #1533. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:142

Q5KLX0              	100.00%		H2Q6T4              	100.00%
Bootstrap support for Q5KLX0 as seed ortholog is 100%.
Bootstrap support for H2Q6T4 as seed ortholog is 100%.

Group of orthologs #1534. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.troglodytes:142

Q5KEW4              	100.00%		H2QLV3              	100.00%
Bootstrap support for Q5KEW4 as seed ortholog is 100%.
Bootstrap support for H2QLV3 as seed ortholog is 100%.

Group of orthologs #1535. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.troglodytes:23

Q5KJV3              	100.00%		H2Q8S3              	100.00%
                    	       		H2Q401              	60.83%
                    	       		H2PYE3              	29.91%
                    	       		H2QU12              	25.93%
                    	       		H2QYE0              	24.15%
Bootstrap support for Q5KJV3 as seed ortholog is 96%.
Bootstrap support for H2Q8S3 as seed ortholog is 75%.

Group of orthologs #1536. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:141

Q5KMC2              	100.00%		H2R0R4              	100.00%
                    	       		H2R0J3              	53.94%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for H2R0R4 as seed ortholog is 100%.

Group of orthologs #1537. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:141

Q5K774              	100.00%		H2Q534              	100.00%
Bootstrap support for Q5K774 as seed ortholog is 100%.
Bootstrap support for H2Q534 as seed ortholog is 100%.

Group of orthologs #1538. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:141

Q5KPB0              	100.00%		H2QHD3              	100.00%
Bootstrap support for Q5KPB0 as seed ortholog is 100%.
Bootstrap support for H2QHD3 as seed ortholog is 100%.

Group of orthologs #1539. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:141

Q5KMP8              	100.00%		H2QKB8              	100.00%
Bootstrap support for Q5KMP8 as seed ortholog is 100%.
Bootstrap support for H2QKB8 as seed ortholog is 100%.

Group of orthologs #1540. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:141

Q5KAJ5              	100.00%		H2R3I2              	100.00%
Bootstrap support for Q5KAJ5 as seed ortholog is 100%.
Bootstrap support for H2R3I2 as seed ortholog is 100%.

Group of orthologs #1541. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:38

Q5KF49              	100.00%		H2QZI5              	100.00%
Bootstrap support for Q5KF49 as seed ortholog is 91%.
Bootstrap support for H2QZI5 as seed ortholog is 81%.

Group of orthologs #1542. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:56

Q5KGC9              	100.00%		H2R088              	100.00%
Bootstrap support for Q5KGC9 as seed ortholog is 100%.
Bootstrap support for H2R088 as seed ortholog is 98%.

Group of orthologs #1543. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.troglodytes:141

Q5KJ00              	100.00%		H2QZB8              	100.00%
Bootstrap support for Q5KJ00 as seed ortholog is 100%.
Bootstrap support for H2QZB8 as seed ortholog is 100%.

Group of orthologs #1544. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:6 P.troglodytes:11

Q5KDD8              	100.00%		H2QME6              	100.00%
                    	       		H2RD27              	43.28%
                    	       		H2QG67              	42.03%
                    	       		H2QSI3              	40.98%
                    	       		H2R682              	40.69%
                    	       		H2QH18              	40.31%
                    	       		H2QME7              	40.31%
                    	       		H2RB66              	40.21%
                    	       		H2Q190              	39.83%
                    	       		H2RCG2              	39.73%
                    	       		H2QFX4              	39.54%
                    	       		H2RD67              	39.25%
                    	       		H2RBK9              	39.06%
                    	       		H2QFW5              	39.06%
                    	       		H2R417              	38.96%
                    	       		H2Q781              	38.77%
                    	       		H2QFX3              	38.58%
                    	       		H2RE20              	38.58%
                    	       		H2QG76              	38.48%
                    	       		A2T759              	38.10%
                    	       		H2QCC1              	38.10%
                    	       		H2R6I1              	38.00%
                    	       		H2R012              	37.91%
                    	       		H2QH16              	37.91%
                    	       		H2QU46              	37.91%
                    	       		H2QFW7              	37.72%
                    	       		H2QUM3              	37.62%
                    	       		H2QWY2              	37.52%
                    	       		H2R655              	37.52%
                    	       		H2RGJ7              	37.52%
                    	       		H2QH15              	37.43%
                    	       		H2R271              	37.43%
                    	       		H2QH91              	37.33%
                    	       		H2R480              	37.33%
                    	       		H2QS49              	37.14%
                    	       		H2R3I0              	36.95%
                    	       		H2QH86              	36.95%
                    	       		H2QUM4              	36.95%
                    	       		H2QWX9              	36.95%
                    	       		H2QBZ6              	36.85%
                    	       		H2REH7              	36.85%
                    	       		H2QG13              	36.85%
                    	       		H2QG69              	36.85%
                    	       		H2RBQ5              	36.66%
                    	       		H2QHB1              	36.56%
                    	       		H2QU62              	36.47%
                    	       		H2R3V3              	36.47%
                    	       		H2R177              	36.47%
                    	       		H2R5T2              	36.47%
                    	       		H2RA76              	36.37%
                    	       		H2QH93              	36.37%
                    	       		H2QHA0              	36.28%
                    	       		H2RCI3              	36.18%
                    	       		H2QHC1              	36.18%
                    	       		H2QZD8              	36.08%
                    	       		H2R5H8              	35.99%
                    	       		H2QYJ0              	35.89%
                    	       		H2QHA7              	35.70%
                    	       		H2QH13              	35.60%
                    	       		H2RD43              	35.51%
                    	       		H2QGI5              	35.41%
                    	       		H2QFY0              	35.32%
                    	       		H2QKU5              	35.32%
                    	       		H2QFX6              	35.22%
                    	       		H2Q787              	35.03%
                    	       		H2RC45              	35.03%
                    	       		H2QGI6              	35.03%
                    	       		H2QH98              	34.93%
                    	       		H2QGJ7              	34.74%
                    	       		H2R681              	34.74%
                    	       		H2REG1              	34.74%
                    	       		H2REE7              	34.74%
                    	       		H2R5T1              	34.64%
                    	       		H2QG75              	34.55%
                    	       		H2QS48              	34.55%
                    	       		H2R149              	34.45%
                    	       		H2PYV9              	34.45%
                    	       		H2QA03              	34.36%
                    	       		H2R3I9              	34.26%
                    	       		H2QH20              	34.17%
                    	       		H2QGJ8              	33.97%
                    	       		H2QSK7              	33.97%
                    	       		H2Q4L5              	33.88%
                    	       		H2RDC2              	33.88%
                    	       		H2QG62              	33.88%
                    	       		H2QHA4              	33.88%
                    	       		H2R535              	33.78%
                    	       		H2R639              	33.78%
                    	       		H2QS50              	33.78%
                    	       		H2QGJ1              	33.59%
                    	       		H2R5T9              	33.49%
                    	       		H2QWW5              	33.40%
                    	       		H2QHB8              	33.40%
                    	       		H2RG74              	33.40%
                    	       		H2QWU8              	33.21%
                    	       		H2QH92              	33.11%
                    	       		H2QFF3              	33.01%
                    	       		H2R058              	33.01%
                    	       		H2QG71              	33.01%
                    	       		H2R679              	33.01%
                    	       		H2REP1              	32.92%
                    	       		H2QWY0              	32.82%
                    	       		H2QFW4              	32.73%
                    	       		H2QWP7              	32.73%
                    	       		H2RE22              	32.73%
                    	       		H2QRT6              	32.63%
                    	       		H2QUM8              	32.44%
                    	       		H2QXP9              	32.34%
                    	       		H2RI14              	32.25%
                    	       		H2QFV9              	32.15%
                    	       		H2R0U3              	32.15%
                    	       		H2R0W5              	32.15%
                    	       		H2QFX8              	32.15%
                    	       		H2QFX0              	32.15%
                    	       		H2QXX3              	31.96%
                    	       		H2QGI4              	31.96%
                    	       		H2QH95              	31.86%
                    	       		H2QG63              	31.77%
                    	       		H2QH21              	31.67%
                    	       		H2QUM9              	31.67%
                    	       		H2QUM5              	31.67%
                    	       		H2QYI9              	31.67%
                    	       		H2RAR5              	31.57%
                    	       		H2RFY7              	31.57%
                    	       		H2RIK7              	31.38%
                    	       		H2QEB0              	31.29%
                    	       		H2QKH9              	31.29%
                    	       		H2QXI8              	31.19%
                    	       		H2QH26              	31.09%
                    	       		H2QS51              	31.00%
                    	       		H2QUN1              	31.00%
                    	       		H2QFF0              	30.90%
                    	       		H2QG72              	30.90%
                    	       		H2RFS0              	30.90%
                    	       		H2QED3              	30.81%
                    	       		H2QFW9              	30.71%
                    	       		H2RC73              	30.71%
                    	       		H2R3Z3              	30.71%
                    	       		H2RGS4              	30.71%
                    	       		H2R5T8              	30.52%
                    	       		H2QS53              	30.33%
                    	       		H2R247              	30.33%
                    	       		H2QH06              	30.33%
                    	       		H2QLC6              	30.33%
                    	       		H2R0F1              	30.23%
                    	       		H2QFE7              	30.13%
                    	       		H2RDV5              	30.04%
                    	       		H2QZH3              	29.94%
                    	       		H2RDW2              	29.94%
                    	       		H2R013              	29.85%
                    	       		H2QH12              	29.85%
                    	       		H2QGX4              	29.65%
                    	       		H2Q782              	29.65%
                    	       		H2QYI1              	29.56%
                    	       		H2R440              	29.46%
                    	       		H2QHA2              	29.46%
                    	       		H2QK47              	29.46%
                    	       		H2RAW8              	29.46%
                    	       		H2RD39              	29.46%
                    	       		A2T6V8              	29.37%
                    	       		H2QFE8              	29.37%
                    	       		H2QYI8              	29.27%
                    	       		H2QFF5              	29.27%
                    	       		H2R1T8              	29.27%
                    	       		H2Q335              	28.98%
                    	       		H2QK04              	28.89%
                    	       		H2QFF1              	28.79%
                    	       		H2QG14              	28.79%
                    	       		H2R157              	28.60%
                    	       		H2QHC6              	28.60%
                    	       		H2RDB6              	28.41%
                    	       		H2QFF6              	28.41%
                    	       		H2RFR9              	28.31%
                    	       		H2QG65              	28.21%
                    	       		H2QH22              	28.12%
                    	       		H2R640              	28.12%
                    	       		H2QHA5              	28.02%
                    	       		H2R1B3              	28.02%
                    	       		H2RBA8              	27.93%
                    	       		H2QFF2              	27.83%
                    	       		H2QME9              	27.64%
                    	       		H2QH87              	27.54%
                    	       		H2R322              	27.45%
                    	       		H2QH97              	27.35%
                    	       		H2QXH8              	27.35%
                    	       		H2QFF9              	27.35%
                    	       		H2QHA8              	27.26%
                    	       		H2REP2              	27.16%
                    	       		H2R431              	27.16%
                    	       		H2Q2X6              	27.06%
                    	       		H2QF95              	26.97%
                    	       		H2R075              	26.87%
                    	       		H2RH32              	26.78%
                    	       		H2QEX7              	26.78%
                    	       		H2R7W9              	26.49%
                    	       		H2QH90              	26.20%
                    	       		H2R060              	26.01%
                    	       		H2RDI2              	26.01%
                    	       		H2R955              	25.91%
                    	       		H2QXI9              	25.82%
                    	       		H2R5V4              	25.82%
                    	       		H2R6C9              	25.62%
                    	       		H2R2T4              	25.34%
                    	       		H2RBW9              	24.95%
                    	       		H2R4W3              	24.86%
                    	       		H2R680              	24.86%
                    	       		H2R670              	24.66%
                    	       		H2REK2              	24.66%
                    	       		H2R1F3              	24.57%
                    	       		H2QHA9              	24.57%
                    	       		G2HIU0              	24.47%
                    	       		H2QF99              	24.47%
                    	       		H2QME8              	24.28%
                    	       		H2QG61              	24.28%
                    	       		H2QGJ5              	24.09%
                    	       		H2R683              	23.99%
                    	       		H2QMC6              	23.99%
                    	       		A2T7D2              	23.90%
                    	       		H2QGJ0              	23.90%
                    	       		H2QHA1              	23.80%
                    	       		H2R0B8              	23.42%
                    	       		H2R6D9              	23.32%
                    	       		H2QHA3              	22.94%
                    	       		H2RBZ2              	22.94%
                    	       		H2RGZ1              	22.84%
                    	       		H2QZG5              	22.74%
                    	       		H2QG66              	22.65%
                    	       		H2QBH1              	22.55%
                    	       		H2Q1I3              	22.55%
                    	       		H2RCL8              	22.55%
                    	       		H2QSI4              	22.46%
                    	       		H2QAF5              	22.36%
                    	       		H2RBA5              	21.88%
                    	       		H2R3V2              	21.79%
                    	       		H2QS63              	21.79%
                    	       		H2QAZ3              	21.69%
                    	       		H2QFF8              	21.31%
                    	       		H2PZS9              	21.21%
                    	       		H2QH25              	21.11%
                    	       		H2QAY2              	21.11%
                    	       		H2R4C4              	21.02%
                    	       		H2QSH9              	21.02%
                    	       		H2R5T7              	21.02%
                    	       		H2Q1U4              	20.83%
                    	       		H2QFW3              	20.73%
                    	       		H2QGI8              	20.73%
                    	       		H2R0W8              	20.73%
                    	       		H2RCN2              	20.63%
                    	       		H2QFA1              	20.25%
                    	       		H2QGI9              	20.25%
                    	       		H2R4H6              	20.15%
                    	       		Q6J6I6              	19.87%
                    	       		H2RC02              	19.48%
                    	       		H2R0V6              	19.39%
                    	       		H2QAX7              	19.29%
                    	       		H2QVK9              	19.29%
                    	       		H2QAX4              	19.19%
                    	       		H2R668              	19.10%
                    	       		H2QUN0              	19.00%
                    	       		H2PYS1              	18.81%
                    	       		H2PYS2              	18.81%
                    	       		H2R6H7              	18.43%
                    	       		H2R8C5              	18.23%
                    	       		H2R311              	17.85%
                    	       		H2RA58              	17.47%
                    	       		H2QH14              	17.27%
                    	       		H2QFA0              	17.08%
                    	       		H2RDW5              	16.99%
                    	       		H2Q1G6              	16.60%
                    	       		H2RD10              	16.12%
                    	       		H2RBS9              	16.03%
                    	       		H2RBV8              	15.83%
                    	       		H2QHC0              	15.83%
                    	       		H2QFV8              	15.36%
                    	       		H2R0I4              	15.07%
                    	       		G2HEC2              	14.97%
                    	       		H2QEX5              	14.59%
                    	       		H2QV06              	14.59%
                    	       		H2QUL5              	13.82%
                    	       		H2QZU0              	13.05%
                    	       		H2Q1G5              	12.96%
                    	       		H2R4V8              	12.76%
                    	       		G2HIT9              	12.38%
                    	       		H2QG12              	12.38%
                    	       		H2Q5D3              	12.00%
                    	       		H2QNP7              	10.27%
                    	       		H2QQ36              	10.08%
                    	       		H2R112              	7.39%
                    	       		H2RF79              	7.01%
                    	       		H2QH72              	6.62%
                    	       		H2QGF8              	5.57%
Bootstrap support for Q5KDD8 as seed ortholog is 38%.
Alternative seed ortholog is Q5KCD1 (6 bits away from this cluster)
Bootstrap support for H2QME6 as seed ortholog is 60%.
Alternative seed ortholog is H2Q7C0 (11 bits away from this cluster)

Group of orthologs #1545. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:20

Q5KFL8              	100.00%		H2QFN3              	100.00%
Q5KLI6              	6.35%		H2QFN1              	85.80%
                    	       		H2R6B5              	80.76%
                    	       		H2QFM8              	79.81%
                    	       		H2QZI4              	76.87%
                    	       		H2QFM6              	57.62%
                    	       		H2PYZ5              	28.92%
                    	       		H2PYZ6              	28.29%
                    	       		H2R3R0              	26.60%
                    	       		H2PYZ4              	23.45%
                    	       		H2R9W8              	14.72%
Bootstrap support for Q5KFL8 as seed ortholog is 86%.
Bootstrap support for H2QFN3 as seed ortholog is 56%.
Alternative seed ortholog is H2Q8X0 (20 bits away from this cluster)

Group of orthologs #1546. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.troglodytes:140

Q5K7D5              	100.00%		H2QJZ7              	100.00%
                    	       		H2QGD2              	47.30%
Bootstrap support for Q5K7D5 as seed ortholog is 100%.
Bootstrap support for H2QJZ7 as seed ortholog is 100%.

Group of orthologs #1547. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.troglodytes:88

Q5KCA8              	100.00%		H2R337              	100.00%
                    	       		H2Q0X5              	59.76%
Bootstrap support for Q5KCA8 as seed ortholog is 100%.
Bootstrap support for H2R337 as seed ortholog is 99%.

Group of orthologs #1548. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.troglodytes:140

Q5KPS3              	100.00%		H2Q4H8              	100.00%
Bootstrap support for Q5KPS3 as seed ortholog is 100%.
Bootstrap support for H2Q4H8 as seed ortholog is 100%.

Group of orthologs #1549. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.troglodytes:140

Q5KKE8              	100.00%		H2QFA4              	100.00%
Bootstrap support for Q5KKE8 as seed ortholog is 100%.
Bootstrap support for H2QFA4 as seed ortholog is 100%.

Group of orthologs #1550. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.troglodytes:140

Q5KJ91              	100.00%		H2R3N4              	100.00%
Bootstrap support for Q5KJ91 as seed ortholog is 100%.
Bootstrap support for H2R3N4 as seed ortholog is 100%.

Group of orthologs #1551. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KDV9              	100.00%		G2HHW3              	100.00%
                    	       		H2Q5I9              	54.21%
                    	       		H2RAF2              	38.46%
Bootstrap support for Q5KDV9 as seed ortholog is 100%.
Bootstrap support for G2HHW3 as seed ortholog is 100%.

Group of orthologs #1552. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KNE0              	100.00%		H2QIF7              	100.00%
                    	       		H2R9A9              	44.74%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for H2QIF7 as seed ortholog is 100%.

Group of orthologs #1553. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:139

Q5KPJ5              	100.00%		H2QM50              	100.00%
                    	       		H2QFL7              	5.05%
Bootstrap support for Q5KPJ5 as seed ortholog is 87%.
Bootstrap support for H2QM50 as seed ortholog is 100%.

Group of orthologs #1554. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.troglodytes:88

P0CS54              	100.00%		G2HF98              	100.00%
Bootstrap support for P0CS54 as seed ortholog is 98%.
Bootstrap support for G2HF98 as seed ortholog is 93%.

Group of orthologs #1555. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KA19              	100.00%		H2PYA9              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for H2PYA9 as seed ortholog is 100%.

Group of orthologs #1556. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KB82              	100.00%		H2QRK0              	100.00%
Bootstrap support for Q5KB82 as seed ortholog is 100%.
Bootstrap support for H2QRK0 as seed ortholog is 100%.

Group of orthologs #1557. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KMI3              	100.00%		H2QIE7              	100.00%
Bootstrap support for Q5KMI3 as seed ortholog is 100%.
Bootstrap support for H2QIE7 as seed ortholog is 100%.

Group of orthologs #1558. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KE04              	100.00%		H2QWA4              	100.00%
Bootstrap support for Q5KE04 as seed ortholog is 100%.
Bootstrap support for H2QWA4 as seed ortholog is 100%.

Group of orthologs #1559. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.troglodytes:139

Q5KNR2              	100.00%		H2QUQ2              	100.00%
Bootstrap support for Q5KNR2 as seed ortholog is 100%.
Bootstrap support for H2QUQ2 as seed ortholog is 100%.

Group of orthologs #1560. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:44

Q5K8Z0              	100.00%		H2Q7G0              	100.00%
                    	       		H2QXT4              	56.60%
                    	       		H2Q0P5              	28.07%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for H2Q7G0 as seed ortholog is 95%.

Group of orthologs #1561. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:57

Q5KN90              	100.00%		G2HI82              	100.00%
Q5KN24              	53.82%		
Bootstrap support for Q5KN90 as seed ortholog is 87%.
Bootstrap support for G2HI82 as seed ortholog is 84%.

Group of orthologs #1562. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:138

Q5KDN1              	100.00%		H2QIP5              	100.00%
                    	       		H2R4L7              	35.42%
Bootstrap support for Q5KDN1 as seed ortholog is 100%.
Bootstrap support for H2QIP5 as seed ortholog is 100%.

Group of orthologs #1563. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:138

Q5K8I0              	100.00%		H2QUW6              	100.00%
                    	       		H2R8U0              	9.91%
Bootstrap support for Q5K8I0 as seed ortholog is 100%.
Bootstrap support for H2QUW6 as seed ortholog is 100%.

Group of orthologs #1564. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:138

P0CO96              	100.00%		G2HH13              	100.00%
Bootstrap support for P0CO96 as seed ortholog is 100%.
Bootstrap support for G2HH13 as seed ortholog is 100%.

Group of orthologs #1565. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:138

Q5K7B2              	100.00%		H2QBK8              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for H2QBK8 as seed ortholog is 100%.

Group of orthologs #1566. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:138

Q5K9M8              	100.00%		H2QBV2              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for H2QBV2 as seed ortholog is 100%.

Group of orthologs #1567. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:76

Q5KDJ4              	100.00%		H2QBJ1              	100.00%
Bootstrap support for Q5KDJ4 as seed ortholog is 100%.
Bootstrap support for H2QBJ1 as seed ortholog is 92%.

Group of orthologs #1568. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.troglodytes:138

Q5KL97              	100.00%		H2QL71              	100.00%
Bootstrap support for Q5KL97 as seed ortholog is 100%.
Bootstrap support for H2QL71 as seed ortholog is 100%.

Group of orthologs #1569. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:137

Q5KHE9              	100.00%		H2Q3Y9              	100.00%
Bootstrap support for Q5KHE9 as seed ortholog is 100%.
Bootstrap support for H2Q3Y9 as seed ortholog is 100%.

Group of orthologs #1570. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:137

Q5KMF3              	100.00%		H2Q467              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 100%.
Bootstrap support for H2Q467 as seed ortholog is 100%.

Group of orthologs #1571. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:137

Q5KBQ4              	100.00%		H2QLN0              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for H2QLN0 as seed ortholog is 100%.

Group of orthologs #1572. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.troglodytes:71

Q5KDN6              	100.00%		H2QLR6              	100.00%
Bootstrap support for Q5KDN6 as seed ortholog is 74%.
Alternative seed ortholog is Q5KN20 (20 bits away from this cluster)
Bootstrap support for H2QLR6 as seed ortholog is 99%.

Group of orthologs #1573. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:137

Q5KNX7              	100.00%		H2QGQ0              	100.00%
Bootstrap support for Q5KNX7 as seed ortholog is 100%.
Bootstrap support for H2QGQ0 as seed ortholog is 100%.

Group of orthologs #1574. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.troglodytes:137

P0CP64              	100.00%		H2R9M3              	100.00%
Bootstrap support for P0CP64 as seed ortholog is 100%.
Bootstrap support for H2R9M3 as seed ortholog is 100%.

Group of orthologs #1575. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.troglodytes:26

Q5KG67              	100.00%		H2PYS0              	100.00%
                    	       		H2QT98              	26.12%
Bootstrap support for Q5KG67 as seed ortholog is 73%.
Alternative seed ortholog is Q5KN28 (20 bits away from this cluster)
Bootstrap support for H2PYS0 as seed ortholog is 97%.

Group of orthologs #1576. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:10

Q5KEP5              	100.00%		H2R0I7              	100.00%
                    	       		H2Q6Q2              	53.65%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for H2R0I7 as seed ortholog is 59%.
Alternative seed ortholog is H2R8X5 (10 bits away from this cluster)

Group of orthologs #1577. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:136

Q5KCQ2              	100.00%		H2R3X7              	100.00%
                    	       		H2QE55              	35.44%
Bootstrap support for Q5KCQ2 as seed ortholog is 98%.
Bootstrap support for H2R3X7 as seed ortholog is 100%.

Group of orthologs #1578. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:3 P.troglodytes:136

Q5KFZ5              	100.00%		H2RAD3              	100.00%
Q5KE95              	10.47%		
Bootstrap support for Q5KFZ5 as seed ortholog is 52%.
Alternative seed ortholog is Q5KN11 (3 bits away from this cluster)
Bootstrap support for H2RAD3 as seed ortholog is 100%.

Group of orthologs #1579. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

Q5KLE1              	100.00%		H2RDL6              	100.00%
                    	       		H2QYU0              	45.28%
Bootstrap support for Q5KLE1 as seed ortholog is 100%.
Bootstrap support for H2RDL6 as seed ortholog is 100%.

Group of orthologs #1580. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

Q5K8V4              	100.00%		H2PZU7              	100.00%
Bootstrap support for Q5K8V4 as seed ortholog is 100%.
Bootstrap support for H2PZU7 as seed ortholog is 100%.

Group of orthologs #1581. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

Q5KEF1              	100.00%		H2QA65              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 100%.
Bootstrap support for H2QA65 as seed ortholog is 100%.

Group of orthologs #1582. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

P0CS06              	100.00%		H2QJX7              	100.00%
Bootstrap support for P0CS06 as seed ortholog is 100%.
Bootstrap support for H2QJX7 as seed ortholog is 100%.

Group of orthologs #1583. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

Q5KEK7              	100.00%		H2QFB4              	100.00%
Bootstrap support for Q5KEK7 as seed ortholog is 100%.
Bootstrap support for H2QFB4 as seed ortholog is 100%.

Group of orthologs #1584. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

Q5KBJ3              	100.00%		H2R9F1              	100.00%
Bootstrap support for Q5KBJ3 as seed ortholog is 100%.
Bootstrap support for H2R9F1 as seed ortholog is 100%.

Group of orthologs #1585. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.troglodytes:136

Q5KK88              	100.00%		H2R5F7              	100.00%
Bootstrap support for Q5KK88 as seed ortholog is 100%.
Bootstrap support for H2R5F7 as seed ortholog is 100%.

Group of orthologs #1586. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:29

Q5KCM4              	100.00%		H2R4E5              	100.00%
                    	       		H2Q704              	36.15%
                    	       		H2Q3Q1              	28.52%
Bootstrap support for Q5KCM4 as seed ortholog is 100%.
Bootstrap support for H2R4E5 as seed ortholog is 93%.

Group of orthologs #1587. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:135

Q5KEC8              	100.00%		H2PYN0              	100.00%
                    	       		H2QTM0              	39.11%
Bootstrap support for Q5KEC8 as seed ortholog is 100%.
Bootstrap support for H2PYN0 as seed ortholog is 100%.

Group of orthologs #1588. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:69

Q5KD44              	100.00%		H2QLG2              	100.00%
                    	       		H2QUL7              	61.69%
Bootstrap support for Q5KD44 as seed ortholog is 100%.
Bootstrap support for H2QLG2 as seed ortholog is 98%.

Group of orthologs #1589. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:135

P0CS64              	100.00%		H2QV04              	100.00%
                    	       		H2QDS1              	28.82%
Bootstrap support for P0CS64 as seed ortholog is 100%.
Bootstrap support for H2QV04 as seed ortholog is 100%.

Group of orthologs #1590. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:135

Q5KFD2              	100.00%		H2Q2V8              	100.00%
Bootstrap support for Q5KFD2 as seed ortholog is 100%.
Bootstrap support for H2Q2V8 as seed ortholog is 100%.

Group of orthologs #1591. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:35 P.troglodytes:46

Q5KF50              	100.00%		H2Q3B8              	100.00%
Bootstrap support for Q5KF50 as seed ortholog is 80%.
Bootstrap support for H2Q3B8 as seed ortholog is 87%.

Group of orthologs #1592. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:135

Q5KQ14              	100.00%		H2Q0J4              	100.00%
Bootstrap support for Q5KQ14 as seed ortholog is 100%.
Bootstrap support for H2Q0J4 as seed ortholog is 100%.

Group of orthologs #1593. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:135

Q5KEX5              	100.00%		H2QF76              	100.00%
Bootstrap support for Q5KEX5 as seed ortholog is 100%.
Bootstrap support for H2QF76 as seed ortholog is 100%.

Group of orthologs #1594. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.troglodytes:135

Q5KFB3              	100.00%		H2QQ85              	100.00%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for H2QQ85 as seed ortholog is 100%.

Group of orthologs #1595. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KNZ5              	100.00%		H2QME1              	100.00%
                    	       		H2QFQ8              	15.48%
                    	       		H2RDX1              	6.94%
                    	       		H2Q5R7              	6.60%
                    	       		H2Q3B5              	6.51%
Bootstrap support for Q5KNZ5 as seed ortholog is 100%.
Bootstrap support for H2QME1 as seed ortholog is 100%.

Group of orthologs #1596. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.troglodytes:60

Q5K8G5              	100.00%		H2Q2A8              	100.00%
                    	       		H2QP68              	100.00%
Bootstrap support for Q5K8G5 as seed ortholog is 97%.
Bootstrap support for H2Q2A8 as seed ortholog is 98%.
Bootstrap support for H2QP68 as seed ortholog is 98%.

Group of orthologs #1597. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KHN0              	100.00%		H2PXW3              	100.00%
                    	       		H2QNQ8              	33.87%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for H2PXW3 as seed ortholog is 100%.

Group of orthologs #1598. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KL32              	100.00%		H2Q276              	100.00%
                    	       		Q64HZ8              	94.75%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for H2Q276 as seed ortholog is 100%.

Group of orthologs #1599. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KIA1              	100.00%		H2QLL3              	100.00%
                    	       		H2QLL2              	47.98%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for H2QLL3 as seed ortholog is 100%.

Group of orthologs #1600. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

P0CN04              	100.00%		H2R2G5              	100.00%
                    	       		H2QQ02              	58.54%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for H2R2G5 as seed ortholog is 100%.

Group of orthologs #1601. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:37 P.troglodytes:60

Q5KPK3              	100.00%		H2QU97              	100.00%
                    	       		H2QNW6              	49.78%
Bootstrap support for Q5KPK3 as seed ortholog is 97%.
Bootstrap support for H2QU97 as seed ortholog is 99%.

Group of orthologs #1602. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KDU3              	100.00%		H2RAH7              	100.00%
                    	       		H2QL39              	33.08%
Bootstrap support for Q5KDU3 as seed ortholog is 100%.
Bootstrap support for H2RAH7 as seed ortholog is 100%.

Group of orthologs #1603. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KDN0              	100.00%		H2QE64              	100.00%
Bootstrap support for Q5KDN0 as seed ortholog is 100%.
Bootstrap support for H2QE64 as seed ortholog is 100%.

Group of orthologs #1604. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KBX8              	100.00%		H2QK73              	100.00%
Bootstrap support for Q5KBX8 as seed ortholog is 100%.
Bootstrap support for H2QK73 as seed ortholog is 100%.

Group of orthologs #1605. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KKG8              	100.00%		H2QCD7              	100.00%
Bootstrap support for Q5KKG8 as seed ortholog is 100%.
Bootstrap support for H2QCD7 as seed ortholog is 100%.

Group of orthologs #1606. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KL77              	100.00%		H2QKR7              	100.00%
Bootstrap support for Q5KL77 as seed ortholog is 100%.
Bootstrap support for H2QKR7 as seed ortholog is 100%.

Group of orthologs #1607. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KB21              	100.00%		H2QYP0              	100.00%
Bootstrap support for Q5KB21 as seed ortholog is 100%.
Bootstrap support for H2QYP0 as seed ortholog is 100%.

Group of orthologs #1608. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:32

Q5K9G6              	100.00%		H2R235              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 99%.
Bootstrap support for H2R235 as seed ortholog is 92%.

Group of orthologs #1609. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KBM9              	100.00%		H2R1Q4              	100.00%
Bootstrap support for Q5KBM9 as seed ortholog is 100%.
Bootstrap support for H2R1Q4 as seed ortholog is 100%.

Group of orthologs #1610. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:18 P.troglodytes:9

Q5KLC5              	100.00%		H2QSS7              	100.00%
Bootstrap support for Q5KLC5 as seed ortholog is 71%.
Alternative seed ortholog is Q5KPY2 (18 bits away from this cluster)
Bootstrap support for H2QSS7 as seed ortholog is 59%.
Alternative seed ortholog is H2R3L5 (9 bits away from this cluster)

Group of orthologs #1611. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

P0CO56              	100.00%		H2RBR9              	100.00%
Bootstrap support for P0CO56 as seed ortholog is 100%.
Bootstrap support for H2RBR9 as seed ortholog is 100%.

Group of orthologs #1612. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.troglodytes:134

Q5KJN1              	100.00%		H2R3V1              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for H2R3V1 as seed ortholog is 100%.

Group of orthologs #1613. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 P.troglodytes:133

Q5K6U4              	100.00%		H2QMM3              	100.00%
                    	       		H2QSU2              	34.85%
                    	       		H2QMK1              	27.31%
Bootstrap support for Q5K6U4 as seed ortholog is 100%.
Bootstrap support for H2QMM3 as seed ortholog is 100%.

Group of orthologs #1614. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 P.troglodytes:133

P0CO50              	100.00%		H2RC89              	100.00%
                    	       		H2R209              	85.69%
Bootstrap support for P0CO50 as seed ortholog is 100%.
Bootstrap support for H2RC89 as seed ortholog is 100%.

Group of orthologs #1615. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 P.troglodytes:133

Q5K9C9              	100.00%		H2Q619              	100.00%
Bootstrap support for Q5K9C9 as seed ortholog is 100%.
Bootstrap support for H2Q619 as seed ortholog is 100%.

Group of orthologs #1616. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 P.troglodytes:133

Q5KIN8              	100.00%		H2Q324              	100.00%
Bootstrap support for Q5KIN8 as seed ortholog is 100%.
Bootstrap support for H2Q324 as seed ortholog is 100%.

Group of orthologs #1617. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 P.troglodytes:132

Q5KGA7              	100.00%		A0FI79              	100.00%
Bootstrap support for Q5KGA7 as seed ortholog is 100%.
Bootstrap support for A0FI79 as seed ortholog is 100%.

Group of orthologs #1618. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 P.troglodytes:132

Q5KLU4              	100.00%		H2QDU9              	100.00%
Bootstrap support for Q5KLU4 as seed ortholog is 100%.
Bootstrap support for H2QDU9 as seed ortholog is 100%.

Group of orthologs #1619. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:35 P.troglodytes:19

Q5KMV5              	100.00%		H2RG54              	100.00%
Bootstrap support for Q5KMV5 as seed ortholog is 90%.
Bootstrap support for H2RG54 as seed ortholog is 70%.
Alternative seed ortholog is H2R3L5 (19 bits away from this cluster)

Group of orthologs #1620. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:131

P0CR60              	100.00%		H2QTI3              	100.00%
                    	       		H2QYS0              	35.00%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for H2QTI3 as seed ortholog is 100%.

Group of orthologs #1621. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:64

P0CP32              	100.00%		H2QDD6              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for H2QDD6 as seed ortholog is 96%.

Group of orthologs #1622. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:131

Q5KGC2              	100.00%		H2Q9L6              	100.00%
Bootstrap support for Q5KGC2 as seed ortholog is 100%.
Bootstrap support for H2Q9L6 as seed ortholog is 100%.

Group of orthologs #1623. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:86

Q5KLM7              	100.00%		H2Q8V8              	100.00%
Bootstrap support for Q5KLM7 as seed ortholog is 100%.
Bootstrap support for H2Q8V8 as seed ortholog is 99%.

Group of orthologs #1624. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.troglodytes:131

Q5KL67              	100.00%		H2QCB7              	100.00%
Bootstrap support for Q5KL67 as seed ortholog is 100%.
Bootstrap support for H2QCB7 as seed ortholog is 100%.

Group of orthologs #1625. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.troglodytes:42

Q5KCU7              	100.00%		H2QKT2              	100.00%
Bootstrap support for Q5KCU7 as seed ortholog is 86%.
Bootstrap support for H2QKT2 as seed ortholog is 97%.

Group of orthologs #1626. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.troglodytes:56

Q5K9N1              	100.00%		H2Q5A9              	100.00%
                    	       		H2R0Q1              	59.47%
                    	       		H2Q7T1              	15.79%
Bootstrap support for Q5K9N1 as seed ortholog is 100%.
Bootstrap support for H2Q5A9 as seed ortholog is 99%.

Group of orthologs #1627. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.troglodytes:130

Q5KFN4              	100.00%		H2R320              	100.00%
                    	       		H2QKU1              	37.30%
                    	       		H2QW60              	36.60%
Bootstrap support for Q5KFN4 as seed ortholog is 100%.
Bootstrap support for H2R320 as seed ortholog is 100%.

Group of orthologs #1628. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.troglodytes:130

Q5KIG9              	100.00%		H2Q5K9              	100.00%
                    	       		H2R876              	15.65%
Bootstrap support for Q5KIG9 as seed ortholog is 100%.
Bootstrap support for H2Q5K9 as seed ortholog is 100%.

Group of orthologs #1629. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.troglodytes:130

Q5KLG7              	100.00%		H2QLD9              	100.00%
Bootstrap support for Q5KLG7 as seed ortholog is 100%.
Bootstrap support for H2QLD9 as seed ortholog is 100%.

Group of orthologs #1630. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.troglodytes:130

Q5KHF1              	100.00%		H2QV18              	100.00%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for H2QV18 as seed ortholog is 100%.

Group of orthologs #1631. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.troglodytes:129

Q5KA72              	100.00%		H2QYT8              	100.00%
                    	       		H2QVS6              	42.71%
                    	       		H2Q799              	39.88%
Bootstrap support for Q5KA72 as seed ortholog is 100%.
Bootstrap support for H2QYT8 as seed ortholog is 100%.

Group of orthologs #1632. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.troglodytes:129

Q5KBU2              	100.00%		H2QLY3              	100.00%
                    	       		H2R569              	46.32%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for H2QLY3 as seed ortholog is 100%.

Group of orthologs #1633. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.troglodytes:129

Q5KMJ1              	100.00%		H2QTR3              	100.00%
                    	       		H2PYG1              	37.73%
Bootstrap support for Q5KMJ1 as seed ortholog is 100%.
Bootstrap support for H2QTR3 as seed ortholog is 100%.

Group of orthologs #1634. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.troglodytes:129

P0CO84              	100.00%		A5A6I3              	100.00%
Bootstrap support for P0CO84 as seed ortholog is 100%.
Bootstrap support for A5A6I3 as seed ortholog is 100%.

Group of orthologs #1635. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:63

Q5K8Y0              	100.00%		H2Q9W3              	100.00%
Bootstrap support for Q5K8Y0 as seed ortholog is 96%.
Bootstrap support for H2Q9W3 as seed ortholog is 95%.

Group of orthologs #1636. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.troglodytes:129

Q5K8P8              	100.00%		H2QKM3              	100.00%
Bootstrap support for Q5K8P8 as seed ortholog is 100%.
Bootstrap support for H2QKM3 as seed ortholog is 100%.

Group of orthologs #1637. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.troglodytes:129

Q5KE19              	100.00%		H2QK14              	100.00%
Bootstrap support for Q5KE19 as seed ortholog is 100%.
Bootstrap support for H2QK14 as seed ortholog is 100%.

Group of orthologs #1638. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:128

Q5KAA2              	100.00%		H2PZP3              	100.00%
Q5KLV1              	17.96%		H2Q6D2              	50.34%
                    	       		H2QE46              	28.10%
                    	       		H2QLN2              	26.41%
                    	       		H2QDU6              	5.64%
Bootstrap support for Q5KAA2 as seed ortholog is 100%.
Bootstrap support for H2PZP3 as seed ortholog is 100%.

Group of orthologs #1639. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:26

Q5KIG2              	100.00%		H2QX12              	100.00%
                    	       		H2QA01              	58.06%
                    	       		H2QF15              	41.77%
                    	       		H2RI95              	33.97%
Bootstrap support for Q5KIG2 as seed ortholog is 95%.
Bootstrap support for H2QX12 as seed ortholog is 74%.
Alternative seed ortholog is H2PZC2 (26 bits away from this cluster)

Group of orthologs #1640. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:128

Q5KKG1              	100.00%		H2Q677              	100.00%
                    	       		H2R806              	21.00%
Bootstrap support for Q5KKG1 as seed ortholog is 100%.
Bootstrap support for H2Q677 as seed ortholog is 100%.

Group of orthologs #1641. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:128

Q5KL56              	100.00%		G2HJL2              	100.00%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for G2HJL2 as seed ortholog is 100%.

Group of orthologs #1642. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:128

Q5KDY6              	100.00%		H2QIN3              	100.00%
Bootstrap support for Q5KDY6 as seed ortholog is 100%.
Bootstrap support for H2QIN3 as seed ortholog is 100%.

Group of orthologs #1643. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:128

Q5KME4              	100.00%		H2QG58              	100.00%
Bootstrap support for Q5KME4 as seed ortholog is 100%.
Bootstrap support for H2QG58 as seed ortholog is 100%.

Group of orthologs #1644. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.troglodytes:128

Q5KLK6              	100.00%		H2QZS9              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for H2QZS9 as seed ortholog is 100%.

Group of orthologs #1645. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.troglodytes:127

Q5KFL4              	100.00%		H2R1I1              	100.00%
                    	       		H2R481              	59.12%
                    	       		H2R866              	58.00%
                    	       		H2RCZ1              	31.97%
Bootstrap support for Q5KFL4 as seed ortholog is 100%.
Bootstrap support for H2R1I1 as seed ortholog is 100%.

Group of orthologs #1646. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.troglodytes:127

Q5K7A4              	100.00%		H2QJ48              	100.00%
Bootstrap support for Q5K7A4 as seed ortholog is 100%.
Bootstrap support for H2QJ48 as seed ortholog is 100%.

Group of orthologs #1647. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.troglodytes:127

Q5KCT3              	100.00%		H2R1F5              	100.00%
Bootstrap support for Q5KCT3 as seed ortholog is 100%.
Bootstrap support for H2R1F5 as seed ortholog is 100%.

Group of orthologs #1648. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.troglodytes:52

Q5KGI3              	100.00%		H2QKA3              	100.00%
                    	       		H2QE79              	90.75%
                    	       		H2QE78              	88.55%
                    	       		H2QAX2              	19.82%
                    	       		H2QUI2              	18.94%
                    	       		H2QV56              	18.94%
                    	       		H2RCW4              	14.10%
Bootstrap support for Q5KGI3 as seed ortholog is 95%.
Bootstrap support for H2QKA3 as seed ortholog is 98%.

Group of orthologs #1649. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:18

Q5KKN1              	100.00%		H2QED7              	100.00%
                    	       		H2Q690              	21.02%
                    	       		H2Q5W2              	20.83%
                    	       		H2QUD6              	16.86%
                    	       		H2Q5W3              	13.26%
                    	       		H2Q5W1              	10.42%
Bootstrap support for Q5KKN1 as seed ortholog is 100%.
Bootstrap support for H2QED7 as seed ortholog is 79%.

Group of orthologs #1650. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:29 P.troglodytes:25

Q5KMM3              	100.00%		H2PZ89              	100.00%
                    	       		H2R0X1              	6.54%
                    	       		H2QBJ9              	5.58%
Bootstrap support for Q5KMM3 as seed ortholog is 77%.
Bootstrap support for H2PZ89 as seed ortholog is 75%.

Group of orthologs #1651. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:126

P0CN06              	100.00%		H2QNT2              	100.00%
                    	       		H2Q7U3              	77.23%
                    	       		H2QAP8              	10.15%
Bootstrap support for P0CN06 as seed ortholog is 100%.
Bootstrap support for H2QNT2 as seed ortholog is 100%.

Group of orthologs #1652. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:126

Q5KNW5              	100.00%		H2QM89              	100.00%
                    	       		H2QB99              	48.00%
Bootstrap support for Q5KNW5 as seed ortholog is 100%.
Bootstrap support for H2QM89 as seed ortholog is 100%.

Group of orthologs #1653. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:126

Q5KCY0              	100.00%		H2PZ37              	100.00%
Bootstrap support for Q5KCY0 as seed ortholog is 100%.
Bootstrap support for H2PZ37 as seed ortholog is 100%.

Group of orthologs #1654. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:126

Q5KA82              	100.00%		H2QBF9              	100.00%
Bootstrap support for Q5KA82 as seed ortholog is 100%.
Bootstrap support for H2QBF9 as seed ortholog is 100%.

Group of orthologs #1655. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:126

Q5KI01              	100.00%		H2QEK5              	100.00%
Bootstrap support for Q5KI01 as seed ortholog is 100%.
Bootstrap support for H2QEK5 as seed ortholog is 100%.

Group of orthologs #1656. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.troglodytes:126

Q5KFM4              	100.00%		H2QWV1              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for H2QWV1 as seed ortholog is 100%.

Group of orthologs #1657. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:60

Q5KFF0              	100.00%		H2QDI5              	100.00%
                    	       		H2Q713              	84.13%
                    	       		H2R986              	58.73%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for H2QDI5 as seed ortholog is 99%.

Group of orthologs #1658. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:52

Q5KIW3              	100.00%		H2QWL8              	100.00%
                    	       		H2R964              	26.46%
Bootstrap support for Q5KIW3 as seed ortholog is 100%.
Bootstrap support for H2QWL8 as seed ortholog is 99%.

Group of orthologs #1659. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:125

Q5KIH9              	100.00%		H2QGR9              	100.00%
Bootstrap support for Q5KIH9 as seed ortholog is 100%.
Bootstrap support for H2QGR9 as seed ortholog is 100%.

Group of orthologs #1660. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:125

Q5KCV9              	100.00%		H2QR10              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for H2QR10 as seed ortholog is 100%.

Group of orthologs #1661. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:125

Q5KFI3              	100.00%		H2QSU8              	100.00%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for H2QSU8 as seed ortholog is 100%.

Group of orthologs #1662. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.troglodytes:31

Q5KJT6              	100.00%		H2QTH4              	100.00%
Bootstrap support for Q5KJT6 as seed ortholog is 93%.
Bootstrap support for H2QTH4 as seed ortholog is 77%.

Group of orthologs #1663. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.troglodytes:125

Q5KFU9              	100.00%		H2R145              	100.00%
Bootstrap support for Q5KFU9 as seed ortholog is 100%.
Bootstrap support for H2R145 as seed ortholog is 100%.

Group of orthologs #1664. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.troglodytes:42

Q5KA73              	100.00%		H2PYI1              	100.00%
                    	       		H2QKD5              	33.21%
                    	       		H2Q8I9              	20.94%
Bootstrap support for Q5KA73 as seed ortholog is 100%.
Bootstrap support for H2PYI1 as seed ortholog is 95%.

Group of orthologs #1665. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.troglodytes:124

P0CN00              	100.00%		H2Q4T9              	100.00%
Bootstrap support for P0CN00 as seed ortholog is 100%.
Bootstrap support for H2Q4T9 as seed ortholog is 100%.

Group of orthologs #1666. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.troglodytes:124

Q5K7I7              	100.00%		H2Q7L9              	100.00%
Bootstrap support for Q5K7I7 as seed ortholog is 100%.
Bootstrap support for H2Q7L9 as seed ortholog is 100%.

Group of orthologs #1667. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.troglodytes:124

Q5KEY6              	100.00%		H2QK06              	100.00%
Bootstrap support for Q5KEY6 as seed ortholog is 100%.
Bootstrap support for H2QK06 as seed ortholog is 100%.

Group of orthologs #1668. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.troglodytes:124

Q5KEJ8              	100.00%		H2REA5              	100.00%
Bootstrap support for Q5KEJ8 as seed ortholog is 100%.
Bootstrap support for H2REA5 as seed ortholog is 100%.

Group of orthologs #1669. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.troglodytes:123

Q5KEH9              	100.00%		Q7YS44              	100.00%
                    	       		H2Q0L4              	70.61%
                    	       		H2Q0L5              	50.05%
                    	       		H2Q0L6              	48.92%
Bootstrap support for Q5KEH9 as seed ortholog is 65%.
Alternative seed ortholog is Q5KNU9 (24 bits away from this cluster)
Bootstrap support for Q7YS44 as seed ortholog is 100%.

Group of orthologs #1670. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.troglodytes:123

Q5KA89              	100.00%		H2QPU1              	100.00%
                    	       		H2Q1V6              	30.65%
                    	       		H2QI10              	21.54%
Bootstrap support for Q5KA89 as seed ortholog is 100%.
Bootstrap support for H2QPU1 as seed ortholog is 100%.

Group of orthologs #1671. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.troglodytes:123

Q5KGZ8              	100.00%		H2QFK6              	100.00%
                    	       		H2RA32              	42.20%
Bootstrap support for Q5KGZ8 as seed ortholog is 100%.
Bootstrap support for H2QFK6 as seed ortholog is 100%.

Group of orthologs #1672. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.troglodytes:123

Q5KHF6              	100.00%		H2QSV4              	100.00%
                    	       		H2R3K9              	41.57%
Bootstrap support for Q5KHF6 as seed ortholog is 100%.
Bootstrap support for H2QSV4 as seed ortholog is 100%.

Group of orthologs #1673. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.troglodytes:123

Q5KDU6              	100.00%		H2Q048              	100.00%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for H2Q048 as seed ortholog is 100%.

Group of orthologs #1674. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.troglodytes:123

P0CO38              	100.00%		H2QIN9              	100.00%
Bootstrap support for P0CO38 as seed ortholog is 100%.
Bootstrap support for H2QIN9 as seed ortholog is 100%.

Group of orthologs #1675. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.troglodytes:123

Q5KIC9              	100.00%		H2QAB7              	100.00%
Bootstrap support for Q5KIC9 as seed ortholog is 100%.
Bootstrap support for H2QAB7 as seed ortholog is 100%.

Group of orthologs #1676. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.troglodytes:122

Q5KCX6              	100.00%		H2Q774              	100.00%
                    	       		H2QAZ2              	56.06%
                    	       		H2QUQ1              	54.69%
                    	       		H2Q3R5              	51.95%
                    	       		H2QTV4              	10.98%
Bootstrap support for Q5KCX6 as seed ortholog is 100%.
Bootstrap support for H2Q774 as seed ortholog is 100%.

Group of orthologs #1677. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.troglodytes:122

Q5KB39              	100.00%		H2Q3Y7              	100.00%
                    	       		H2Q8U6              	20.16%
Bootstrap support for Q5KB39 as seed ortholog is 100%.
Bootstrap support for H2Q3Y7 as seed ortholog is 100%.

Group of orthologs #1678. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:23

P0CR62              	100.00%		H2QXP7              	100.00%
                    	       		H2PZG3              	34.26%
Bootstrap support for P0CR62 as seed ortholog is 91%.
Bootstrap support for H2QXP7 as seed ortholog is 70%.
Alternative seed ortholog is H2QN95 (23 bits away from this cluster)

Group of orthologs #1679. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.troglodytes:122

P0CS68              	100.00%		H2Q2K7              	100.00%
Bootstrap support for P0CS68 as seed ortholog is 100%.
Bootstrap support for H2Q2K7 as seed ortholog is 100%.

Group of orthologs #1680. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.troglodytes:122

Q5KAB9              	100.00%		H2QHY6              	100.00%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for H2QHY6 as seed ortholog is 100%.

Group of orthologs #1681. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.troglodytes:122

Q5KME8              	100.00%		H2Q8U0              	100.00%
Bootstrap support for Q5KME8 as seed ortholog is 100%.
Bootstrap support for H2Q8U0 as seed ortholog is 100%.

Group of orthologs #1682. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KEI7              	100.00%		H2PY24              	100.00%
                    	       		H2PY22              	48.68%
Bootstrap support for Q5KEI7 as seed ortholog is 100%.
Bootstrap support for H2PY24 as seed ortholog is 100%.

Group of orthologs #1683. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

P0CQ62              	100.00%		H2QAY5              	100.00%
                    	       		H2QXL9              	43.57%
Bootstrap support for P0CQ62 as seed ortholog is 100%.
Bootstrap support for H2QAY5 as seed ortholog is 100%.

Group of orthologs #1684. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5K6Y0              	100.00%		H2QKR9              	100.00%
                    	       		H2PYH7              	60.17%
Bootstrap support for Q5K6Y0 as seed ortholog is 100%.
Bootstrap support for H2QKR9 as seed ortholog is 100%.

Group of orthologs #1685. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.troglodytes:121

Q5KLN7              	100.00%		H2QAH8              	100.00%
Q5KLN8              	55.49%		
Bootstrap support for Q5KLN7 as seed ortholog is 92%.
Bootstrap support for H2QAH8 as seed ortholog is 100%.

Group of orthologs #1686. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KIM4              	100.00%		H2RA14              	100.00%
                    	       		H2QN74              	39.23%
Bootstrap support for Q5KIM4 as seed ortholog is 100%.
Bootstrap support for H2RA14 as seed ortholog is 100%.

Group of orthologs #1687. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KH59              	100.00%		H2PYB1              	100.00%
Bootstrap support for Q5KH59 as seed ortholog is 100%.
Bootstrap support for H2PYB1 as seed ortholog is 100%.

Group of orthologs #1688. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KEF6              	100.00%		H2QAB9              	100.00%
Bootstrap support for Q5KEF6 as seed ortholog is 100%.
Bootstrap support for H2QAB9 as seed ortholog is 100%.

Group of orthologs #1689. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KBR9              	100.00%		H2QDK5              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for H2QDK5 as seed ortholog is 100%.

Group of orthologs #1690. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

P0CL96              	100.00%		H2QSH8              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 100%.
Bootstrap support for H2QSH8 as seed ortholog is 100%.

Group of orthologs #1691. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KC44              	100.00%		H2QWV7              	100.00%
Bootstrap support for Q5KC44 as seed ortholog is 100%.
Bootstrap support for H2QWV7 as seed ortholog is 100%.

Group of orthologs #1692. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5K889              	100.00%		H2R3Z4              	100.00%
Bootstrap support for Q5K889 as seed ortholog is 100%.
Bootstrap support for H2R3Z4 as seed ortholog is 100%.

Group of orthologs #1693. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:63

Q5KEB8              	100.00%		H2RD40              	100.00%
Bootstrap support for Q5KEB8 as seed ortholog is 100%.
Bootstrap support for H2RD40 as seed ortholog is 99%.

Group of orthologs #1694. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.troglodytes:121

Q5KF06              	100.00%		H2RDR7              	100.00%
Bootstrap support for Q5KF06 as seed ortholog is 100%.
Bootstrap support for H2RDR7 as seed ortholog is 100%.

Group of orthologs #1695. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.troglodytes:120

Q5KMN4              	100.00%		H2R8Q5              	100.00%
                    	       		H2Q386              	56.72%
                    	       		H2Q6H6              	48.69%
                    	       		H2Q593              	12.76%
                    	       		H2QYK7              	12.26%
                    	       		H2Q3C2              	11.92%
                    	       		H2PZM5              	11.83%
                    	       		H2R8Q6              	11.75%
                    	       		H2PZM6              	11.41%
                    	       		H2RI65              	11.07%
                    	       		H2R7L1              	10.99%
                    	       		H2Q594              	10.74%
                    	       		H2QHH1              	10.31%
                    	       		H2QWL3              	10.14%
                    	       		A4K2N8              	9.38%
                    	       		H2R2Y3              	8.20%
                    	       		H2QWY9              	8.03%
                    	       		H2QHT4              	7.61%
                    	       		H2QBM3              	7.19%
                    	       		H2QER1              	6.17%
                    	       		H2RIE6              	5.92%
Bootstrap support for Q5KMN4 as seed ortholog is 100%.
Bootstrap support for H2R8Q5 as seed ortholog is 100%.

Group of orthologs #1696. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:54

Q5K8L2              	100.00%		H2R9A0              	100.00%
                    	       		H2Q8H9              	68.57%
                    	       		H2QH50              	34.18%
                    	       		H2QBK1              	16.03%
                    	       		H2QCJ6              	14.35%
Bootstrap support for Q5K8L2 as seed ortholog is 91%.
Bootstrap support for H2R9A0 as seed ortholog is 88%.

Group of orthologs #1697. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.troglodytes:120

Q5KLD3              	100.00%		H2Q641              	100.00%
                    	       		H2QDB5              	57.78%
Bootstrap support for Q5KLD3 as seed ortholog is 100%.
Bootstrap support for H2Q641 as seed ortholog is 100%.

Group of orthologs #1698. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.troglodytes:120

Q5K9B3              	100.00%		H2QQK3              	100.00%
                    	       		H2QBB1              	15.81%
Bootstrap support for Q5K9B3 as seed ortholog is 100%.
Bootstrap support for H2QQK3 as seed ortholog is 100%.

Group of orthologs #1699. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.troglodytes:120

Q5K751              	100.00%		H2RBK5              	100.00%
                    	       		H2QS02              	68.99%
Bootstrap support for Q5K751 as seed ortholog is 100%.
Bootstrap support for H2RBK5 as seed ortholog is 100%.

Group of orthologs #1700. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.troglodytes:120

Q5K7W3              	100.00%		H2PYS3              	100.00%
Bootstrap support for Q5K7W3 as seed ortholog is 100%.
Bootstrap support for H2PYS3 as seed ortholog is 100%.

Group of orthologs #1701. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:39 P.troglodytes:10

Q5KDS6              	100.00%		H2QYJ9              	100.00%
Bootstrap support for Q5KDS6 as seed ortholog is 68%.
Alternative seed ortholog is Q5KIS6 (39 bits away from this cluster)
Bootstrap support for H2QYJ9 as seed ortholog is 87%.

Group of orthologs #1702. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.troglodytes:119

Q5KK20              	100.00%		H2Q210              	100.00%
Bootstrap support for Q5KK20 as seed ortholog is 75%.
Bootstrap support for H2Q210 as seed ortholog is 100%.

Group of orthologs #1703. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.troglodytes:119

Q5KMH2              	100.00%		H2QF70              	100.00%
Bootstrap support for Q5KMH2 as seed ortholog is 100%.
Bootstrap support for H2QF70 as seed ortholog is 100%.

Group of orthologs #1704. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.troglodytes:119

Q5KH20              	100.00%		H2QKQ5              	100.00%
Bootstrap support for Q5KH20 as seed ortholog is 100%.
Bootstrap support for H2QKQ5 as seed ortholog is 100%.

Group of orthologs #1705. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.troglodytes:119

Q5K9X5              	100.00%		H2R7A1              	100.00%
Bootstrap support for Q5K9X5 as seed ortholog is 100%.
Bootstrap support for H2R7A1 as seed ortholog is 100%.

Group of orthologs #1706. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.troglodytes:42

Q5KMQ6              	100.00%		H2RCH7              	100.00%
                    	       		H2Q5W8              	53.93%
                    	       		H2R0D0              	27.53%
                    	       		H2QF79              	27.25%
                    	       		H2RD09              	24.86%
Bootstrap support for Q5KMQ6 as seed ortholog is 77%.
Bootstrap support for H2RCH7 as seed ortholog is 81%.

Group of orthologs #1707. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:118

Q5KA03              	100.00%		H2QEB8              	100.00%
Q5KPE0              	17.88%		H2QHL5              	34.72%
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for H2QEB8 as seed ortholog is 100%.

Group of orthologs #1708. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:6

Q5KLA0              	100.00%		H2Q175              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for H2Q175 as seed ortholog is 66%.
Alternative seed ortholog is H2Q8C1 (6 bits away from this cluster)

Group of orthologs #1709. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:118

Q5KIE2              	100.00%		H2QKZ4              	100.00%
Bootstrap support for Q5KIE2 as seed ortholog is 100%.
Bootstrap support for H2QKZ4 as seed ortholog is 100%.

Group of orthologs #1710. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:118

Q5KKU9              	100.00%		H2QSP4              	100.00%
Bootstrap support for Q5KKU9 as seed ortholog is 100%.
Bootstrap support for H2QSP4 as seed ortholog is 100%.

Group of orthologs #1711. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:118

Q5KMM9              	100.00%		H2QTD9              	100.00%
Bootstrap support for Q5KMM9 as seed ortholog is 100%.
Bootstrap support for H2QTD9 as seed ortholog is 100%.

Group of orthologs #1712. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.troglodytes:118

Q5KA94              	100.00%		H2R8F5              	100.00%
Bootstrap support for Q5KA94 as seed ortholog is 100%.
Bootstrap support for H2R8F5 as seed ortholog is 100%.

Group of orthologs #1713. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:65

Q5KLK0              	100.00%		H2QZL3              	100.00%
                    	       		H2R7R7              	7.32%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for H2QZL3 as seed ortholog is 99%.

Group of orthologs #1714. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.troglodytes:31

Q5KML8              	100.00%		H2R0C6              	100.00%
Q5KJT3              	25.81%		
Bootstrap support for Q5KML8 as seed ortholog is 84%.
Bootstrap support for H2R0C6 as seed ortholog is 84%.

Group of orthologs #1715. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:117

Q5KNI7              	100.00%		H2Q9Q0              	100.00%
Bootstrap support for Q5KNI7 as seed ortholog is 100%.
Bootstrap support for H2Q9Q0 as seed ortholog is 100%.

Group of orthologs #1716. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:117

Q5KDU5              	100.00%		H2QTV1              	100.00%
Bootstrap support for Q5KDU5 as seed ortholog is 100%.
Bootstrap support for H2QTV1 as seed ortholog is 100%.

Group of orthologs #1717. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.troglodytes:117

Q5KQ86              	100.00%		H2QYA2              	100.00%
Bootstrap support for Q5KQ86 as seed ortholog is 100%.
Bootstrap support for H2QYA2 as seed ortholog is 100%.

Group of orthologs #1718. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:116

Q5KHV3              	100.00%		H2QIL2              	100.00%
                    	       		H2QRL8              	15.41%
                    	       		H2R3A5              	13.08%
Bootstrap support for Q5KHV3 as seed ortholog is 100%.
Bootstrap support for H2QIL2 as seed ortholog is 100%.

Group of orthologs #1719. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:116

Q5KGW6              	100.00%		H2QNB9              	100.00%
Q5KI76              	7.83%		
Bootstrap support for Q5KGW6 as seed ortholog is 100%.
Bootstrap support for H2QNB9 as seed ortholog is 100%.

Group of orthologs #1720. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.troglodytes:116

Q5K8W8              	100.00%		H2QB86              	100.00%
Bootstrap support for Q5K8W8 as seed ortholog is 84%.
Bootstrap support for H2QB86 as seed ortholog is 100%.

Group of orthologs #1721. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:116

Q5KMD5              	100.00%		H2QMS8              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for H2QMS8 as seed ortholog is 100%.

Group of orthologs #1722. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:116

Q5KJS9              	100.00%		H2QTU9              	100.00%
Bootstrap support for Q5KJS9 as seed ortholog is 100%.
Bootstrap support for H2QTU9 as seed ortholog is 100%.

Group of orthologs #1723. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:116

Q5KLT4              	100.00%		H2QV89              	100.00%
Bootstrap support for Q5KLT4 as seed ortholog is 100%.
Bootstrap support for H2QV89 as seed ortholog is 100%.

Group of orthologs #1724. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.troglodytes:116

Q5KI04              	100.00%		H2RC12              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for H2RC12 as seed ortholog is 100%.

Group of orthologs #1725. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:3 P.troglodytes:115

Q5KKF3              	100.00%		H2RDP0              	100.00%
                    	       		H2R553              	49.35%
Bootstrap support for Q5KKF3 as seed ortholog is 51%.
Alternative seed ortholog is Q5KFL9 (3 bits away from this cluster)
Bootstrap support for H2RDP0 as seed ortholog is 100%.

Group of orthologs #1726. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.troglodytes:115

Q5KE42              	100.00%		H2QDM9              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for H2QDM9 as seed ortholog is 100%.

Group of orthologs #1727. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.troglodytes:115

Q5K802              	100.00%		H2QL81              	100.00%
Bootstrap support for Q5K802 as seed ortholog is 100%.
Bootstrap support for H2QL81 as seed ortholog is 100%.

Group of orthologs #1728. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.troglodytes:115

Q5KPL4              	100.00%		H2Q7L7              	100.00%
Bootstrap support for Q5KPL4 as seed ortholog is 100%.
Bootstrap support for H2Q7L7 as seed ortholog is 100%.

Group of orthologs #1729. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.troglodytes:115

Q5KMZ5              	100.00%		H2QX68              	100.00%
Bootstrap support for Q5KMZ5 as seed ortholog is 100%.
Bootstrap support for H2QX68 as seed ortholog is 100%.

Group of orthologs #1730. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:36 P.troglodytes:50

Q5KCS6              	100.00%		H2QPU8              	100.00%
                    	       		H2R338              	57.56%
                    	       		H2R4G6              	24.43%
                    	       		H2QWA8              	20.50%
                    	       		H2PY21              	13.04%
Bootstrap support for Q5KCS6 as seed ortholog is 89%.
Bootstrap support for H2QPU8 as seed ortholog is 96%.

Group of orthologs #1731. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KJE8              	100.00%		H2QHW8              	100.00%
                    	       		H2RCH5              	24.00%
Bootstrap support for Q5KJE8 as seed ortholog is 100%.
Bootstrap support for H2QHW8 as seed ortholog is 100%.

Group of orthologs #1732. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KAA6              	100.00%		H2QYA9              	100.00%
                    	       		H2REE0              	72.58%
Bootstrap support for Q5KAA6 as seed ortholog is 100%.
Bootstrap support for H2QYA9 as seed ortholog is 100%.

Group of orthologs #1733. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KLZ3              	100.00%		H2QMR1              	100.00%
                    	       		H2Q5R3              	62.54%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for H2QMR1 as seed ortholog is 100%.

Group of orthologs #1734. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KEG9              	100.00%		G2HHW0              	100.00%
Bootstrap support for Q5KEG9 as seed ortholog is 100%.
Bootstrap support for G2HHW0 as seed ortholog is 100%.

Group of orthologs #1735. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KGL5              	100.00%		H2Q8I6              	100.00%
Bootstrap support for Q5KGL5 as seed ortholog is 100%.
Bootstrap support for H2Q8I6 as seed ortholog is 100%.

Group of orthologs #1736. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KNF1              	100.00%		H2Q897              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for H2Q897 as seed ortholog is 100%.

Group of orthologs #1737. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

P0CS10              	100.00%		H2QPX9              	100.00%
Bootstrap support for P0CS10 as seed ortholog is 100%.
Bootstrap support for H2QPX9 as seed ortholog is 100%.

Group of orthologs #1738. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:42

Q5KF95              	100.00%		H2QPI0              	100.00%
Bootstrap support for Q5KF95 as seed ortholog is 100%.
Bootstrap support for H2QPI0 as seed ortholog is 94%.

Group of orthologs #1739. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:61

Q5KIK8              	100.00%		H2QZX5              	100.00%
Bootstrap support for Q5KIK8 as seed ortholog is 100%.
Bootstrap support for H2QZX5 as seed ortholog is 97%.

Group of orthologs #1740. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.troglodytes:114

Q5KJC8              	100.00%		H2R445              	100.00%
Bootstrap support for Q5KJC8 as seed ortholog is 100%.
Bootstrap support for H2R445 as seed ortholog is 100%.

Group of orthologs #1741. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KDF9              	100.00%		H2PYJ2              	100.00%
Q5KQ97              	17.32%		
Bootstrap support for Q5KDF9 as seed ortholog is 100%.
Bootstrap support for H2PYJ2 as seed ortholog is 100%.

Group of orthologs #1742. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KFY9              	100.00%		H2QSI1              	100.00%
                    	       		H2R600              	5.91%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for H2QSI1 as seed ortholog is 100%.

Group of orthologs #1743. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KL83              	100.00%		H2QQ95              	100.00%
                    	       		H2R351              	6.19%
Bootstrap support for Q5KL83 as seed ortholog is 100%.
Bootstrap support for H2QQ95 as seed ortholog is 100%.

Group of orthologs #1744. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:18 P.troglodytes:27

Q5KQ41              	100.00%		H2QRC6              	100.00%
                    	       		H2Q9X3              	51.01%
Bootstrap support for Q5KQ41 as seed ortholog is 77%.
Bootstrap support for H2QRC6 as seed ortholog is 85%.

Group of orthologs #1745. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

P0CM52              	100.00%		H2Q1A0              	100.00%
Bootstrap support for P0CM52 as seed ortholog is 100%.
Bootstrap support for H2Q1A0 as seed ortholog is 100%.

Group of orthologs #1746. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KL25              	100.00%		G2HHA9              	100.00%
Bootstrap support for Q5KL25 as seed ortholog is 100%.
Bootstrap support for G2HHA9 as seed ortholog is 100%.

Group of orthologs #1747. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

P0CR68              	100.00%		H2QDJ0              	100.00%
Bootstrap support for P0CR68 as seed ortholog is 100%.
Bootstrap support for H2QDJ0 as seed ortholog is 100%.

Group of orthologs #1748. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:51 P.troglodytes:58

P0CR36              	100.00%		H2QEM9              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 95%.
Bootstrap support for H2QEM9 as seed ortholog is 95%.

Group of orthologs #1749. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5K8X7              	100.00%		H2QKW2              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for H2QKW2 as seed ortholog is 100%.

Group of orthologs #1750. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

P0CR58              	100.00%		H2QU34              	100.00%
Bootstrap support for P0CR58 as seed ortholog is 100%.
Bootstrap support for H2QU34 as seed ortholog is 100%.

Group of orthologs #1751. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KA95              	100.00%		H2RCA9              	100.00%
Bootstrap support for Q5KA95 as seed ortholog is 100%.
Bootstrap support for H2RCA9 as seed ortholog is 100%.

Group of orthologs #1752. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KN25              	100.00%		H2QZU9              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for H2QZU9 as seed ortholog is 100%.

Group of orthologs #1753. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KP66              	100.00%		H2R2M2              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for H2R2M2 as seed ortholog is 100%.

Group of orthologs #1754. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KFG9              	100.00%		H2RHV5              	100.00%
Bootstrap support for Q5KFG9 as seed ortholog is 100%.
Bootstrap support for H2RHV5 as seed ortholog is 100%.

Group of orthologs #1755. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.troglodytes:113

Q5KPA5              	100.00%		H2R813              	100.00%
Bootstrap support for Q5KPA5 as seed ortholog is 100%.
Bootstrap support for H2R813 as seed ortholog is 100%.

Group of orthologs #1756. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KG49              	100.00%		H2QG46              	100.00%
Q5KG50              	36.84%		
Bootstrap support for Q5KG49 as seed ortholog is 100%.
Bootstrap support for H2QG46 as seed ortholog is 100%.

Group of orthologs #1757. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KI05              	100.00%		H2R8Q8              	100.00%
                    	       		H2QS45              	69.69%
Bootstrap support for Q5KI05 as seed ortholog is 100%.
Bootstrap support for H2R8Q8 as seed ortholog is 100%.

Group of orthologs #1758. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

P0CR80              	100.00%		H2Q748              	100.00%
Bootstrap support for P0CR80 as seed ortholog is 100%.
Bootstrap support for H2Q748 as seed ortholog is 100%.

Group of orthologs #1759. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

P0CQ30              	100.00%		H2QBN2              	100.00%
Bootstrap support for P0CQ30 as seed ortholog is 100%.
Bootstrap support for H2QBN2 as seed ortholog is 100%.

Group of orthologs #1760. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KPH1              	100.00%		H2Q1L0              	100.00%
Bootstrap support for Q5KPH1 as seed ortholog is 100%.
Bootstrap support for H2Q1L0 as seed ortholog is 100%.

Group of orthologs #1761. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KFY5              	100.00%		H2QJ50              	100.00%
Bootstrap support for Q5KFY5 as seed ortholog is 100%.
Bootstrap support for H2QJ50 as seed ortholog is 100%.

Group of orthologs #1762. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KGD0              	100.00%		H2QXE8              	100.00%
Bootstrap support for Q5KGD0 as seed ortholog is 100%.
Bootstrap support for H2QXE8 as seed ortholog is 100%.

Group of orthologs #1763. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KEN7              	100.00%		H2R129              	100.00%
Bootstrap support for Q5KEN7 as seed ortholog is 100%.
Bootstrap support for H2R129 as seed ortholog is 100%.

Group of orthologs #1764. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KNL8              	100.00%		H2QWK7              	100.00%
Bootstrap support for Q5KNL8 as seed ortholog is 100%.
Bootstrap support for H2QWK7 as seed ortholog is 100%.

Group of orthologs #1765. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KP36              	100.00%		H2R169              	100.00%
Bootstrap support for Q5KP36 as seed ortholog is 100%.
Bootstrap support for H2R169 as seed ortholog is 100%.

Group of orthologs #1766. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KIV2              	100.00%		H2R7H7              	100.00%
Bootstrap support for Q5KIV2 as seed ortholog is 100%.
Bootstrap support for H2R7H7 as seed ortholog is 100%.

Group of orthologs #1767. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.troglodytes:112

Q5KPJ3              	100.00%		H2R3E4              	100.00%
Bootstrap support for Q5KPJ3 as seed ortholog is 100%.
Bootstrap support for H2R3E4 as seed ortholog is 100%.

Group of orthologs #1768. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:4 P.troglodytes:111

Q5KDM8              	100.00%		H2Q3P3              	100.00%
Q5KDM5              	100.00%		H2QDK2              	100.00%
                    	       		H2QHP8              	100.00%
                    	       		H2R730              	95.86%
                    	       		H2QAW7              	78.62%
Bootstrap support for Q5KDM8 as seed ortholog is 41%.
Alternative seed ortholog is Q5KEW7 (4 bits away from this cluster)
Bootstrap support for Q5KDM5 as seed ortholog is 54%.
Alternative seed ortholog is Q5KEW7 (4 bits away from this cluster)
Bootstrap support for H2Q3P3 as seed ortholog is 100%.
Bootstrap support for H2QDK2 as seed ortholog is 100%.
Bootstrap support for H2QHP8 as seed ortholog is 100%.

Group of orthologs #1769. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KER1              	100.00%		H2Q0W1              	100.00%
                    	       		H2Q3A4              	100.00%
                    	       		H2Q6I8              	70.19%
Bootstrap support for Q5KER1 as seed ortholog is 100%.
Bootstrap support for H2Q0W1 as seed ortholog is 100%.
Bootstrap support for H2Q3A4 as seed ortholog is 100%.

Group of orthologs #1770. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5K9D0              	100.00%		H2QL12              	100.00%
                    	       		H2QYU6              	37.77%
                    	       		H2QTA9              	36.33%
Bootstrap support for Q5K9D0 as seed ortholog is 100%.
Bootstrap support for H2QL12 as seed ortholog is 100%.

Group of orthologs #1771. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KCS0              	100.00%		H2QEP8              	100.00%
                    	       		H2QBF2              	17.26%
Bootstrap support for Q5KCS0 as seed ortholog is 100%.
Bootstrap support for H2QEP8 as seed ortholog is 100%.

Group of orthologs #1772. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KPG4              	100.00%		H2Q8P7              	100.00%
                    	       		H2R226              	23.25%
Bootstrap support for Q5KPG4 as seed ortholog is 100%.
Bootstrap support for H2Q8P7 as seed ortholog is 100%.

Group of orthologs #1773. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:19 P.troglodytes:20

Q5KIP0              	100.00%		H2QGS8              	100.00%
Q5KJ03              	13.58%		
Bootstrap support for Q5KIP0 as seed ortholog is 71%.
Alternative seed ortholog is Q5KJU4 (19 bits away from this cluster)
Bootstrap support for H2QGS8 as seed ortholog is 73%.
Alternative seed ortholog is H2R3L5 (20 bits away from this cluster)

Group of orthologs #1774. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KCA1              	100.00%		H2PYC4              	100.00%
Bootstrap support for Q5KCA1 as seed ortholog is 100%.
Bootstrap support for H2PYC4 as seed ortholog is 100%.

Group of orthologs #1775. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KIE5              	100.00%		H2PZF0              	100.00%
Bootstrap support for Q5KIE5 as seed ortholog is 100%.
Bootstrap support for H2PZF0 as seed ortholog is 100%.

Group of orthologs #1776. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5K9B4              	100.00%		H2QCL0              	100.00%
Bootstrap support for Q5K9B4 as seed ortholog is 100%.
Bootstrap support for H2QCL0 as seed ortholog is 100%.

Group of orthologs #1777. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KP16              	100.00%		H2Q7Y9              	100.00%
Bootstrap support for Q5KP16 as seed ortholog is 100%.
Bootstrap support for H2Q7Y9 as seed ortholog is 100%.

Group of orthologs #1778. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KIV7              	100.00%		H2QED1              	100.00%
Bootstrap support for Q5KIV7 as seed ortholog is 100%.
Bootstrap support for H2QED1 as seed ortholog is 100%.

Group of orthologs #1779. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KMN7              	100.00%		H2QHP5              	100.00%
Bootstrap support for Q5KMN7 as seed ortholog is 100%.
Bootstrap support for H2QHP5 as seed ortholog is 100%.

Group of orthologs #1780. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:30 P.troglodytes:111

Q5KLF1              	100.00%		H2QWH5              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 94%.
Bootstrap support for H2QWH5 as seed ortholog is 100%.

Group of orthologs #1781. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.troglodytes:111

Q5KJL3              	100.00%		H2R0D2              	100.00%
Bootstrap support for Q5KJL3 as seed ortholog is 100%.
Bootstrap support for H2R0D2 as seed ortholog is 100%.

Group of orthologs #1782. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.troglodytes:110

Q5K811              	100.00%		H2QFC6              	100.00%
                    	       		H2PZ27              	34.51%
Bootstrap support for Q5K811 as seed ortholog is 100%.
Bootstrap support for H2QFC6 as seed ortholog is 100%.

Group of orthologs #1783. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.troglodytes:110

Q5KB06              	100.00%		H2QIF2              	100.00%
Bootstrap support for Q5KB06 as seed ortholog is 100%.
Bootstrap support for H2QIF2 as seed ortholog is 100%.

Group of orthologs #1784. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.troglodytes:110

Q5KNT2              	100.00%		H2QV98              	100.00%
Bootstrap support for Q5KNT2 as seed ortholog is 100%.
Bootstrap support for H2QV98 as seed ortholog is 100%.

Group of orthologs #1785. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.troglodytes:110

Q5KNG8              	100.00%		H2R9M0              	100.00%
Bootstrap support for Q5KNG8 as seed ortholog is 100%.
Bootstrap support for H2R9M0 as seed ortholog is 100%.

Group of orthologs #1786. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5KNP8              	100.00%		H2Q282              	100.00%
                    	       		H2R7L9              	58.94%
                    	       		H2Q287              	50.95%
                    	       		H2R7M0              	46.75%
                    	       		H2R7L8              	44.99%
                    	       		H2Q283              	44.58%
Bootstrap support for Q5KNP8 as seed ortholog is 100%.
Bootstrap support for H2Q282 as seed ortholog is 100%.

Group of orthologs #1787. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5KMM2              	100.00%		H2R018              	100.00%
                    	       		H2R787              	36.56%
                    	       		H2R251              	14.32%
Bootstrap support for Q5KMM2 as seed ortholog is 100%.
Bootstrap support for H2R018 as seed ortholog is 100%.

Group of orthologs #1788. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5KMB4              	100.00%		H2QUH7              	100.00%
                    	       		H2R523              	78.38%
Bootstrap support for Q5KMB4 as seed ortholog is 100%.
Bootstrap support for H2QUH7 as seed ortholog is 100%.

Group of orthologs #1789. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5K958              	100.00%		H2Q477              	100.00%
Bootstrap support for Q5K958 as seed ortholog is 100%.
Bootstrap support for H2Q477 as seed ortholog is 100%.

Group of orthologs #1790. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5KC49              	100.00%		H2Q3W4              	100.00%
Bootstrap support for Q5KC49 as seed ortholog is 100%.
Bootstrap support for H2Q3W4 as seed ortholog is 100%.

Group of orthologs #1791. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5KGY5              	100.00%		H2Q4X3              	100.00%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for H2Q4X3 as seed ortholog is 100%.

Group of orthologs #1792. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.troglodytes:109

Q5KKF6              	100.00%		H2Q558              	100.00%
Bootstrap support for Q5KKF6 as seed ortholog is 100%.
Bootstrap support for H2Q558 as seed ortholog is 100%.

Group of orthologs #1793. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:49

Q5KLW5              	100.00%		H2Q6K9              	100.00%
                    	       		H2QMQ8              	62.37%
                    	       		H2R4H5              	27.92%
                    	       		H2Q163              	11.84%
                    	       		H2QVZ4              	9.56%
                    	       		H2QS06              	8.80%
Bootstrap support for Q5KLW5 as seed ortholog is 100%.
Bootstrap support for H2Q6K9 as seed ortholog is 91%.

Group of orthologs #1794. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:108

Q5K9H3              	100.00%		H2QI23              	100.00%
                    	       		H2QRR8              	32.19%
Bootstrap support for Q5K9H3 as seed ortholog is 100%.
Bootstrap support for H2QI23 as seed ortholog is 100%.

Group of orthologs #1795. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:108

Q5KD03              	100.00%		H2QCD2              	100.00%
Bootstrap support for Q5KD03 as seed ortholog is 100%.
Bootstrap support for H2QCD2 as seed ortholog is 100%.

Group of orthologs #1796. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:108

Q5KGB9              	100.00%		H2QL70              	100.00%
Bootstrap support for Q5KGB9 as seed ortholog is 100%.
Bootstrap support for H2QL70 as seed ortholog is 100%.

Group of orthologs #1797. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:108

Q5KM68              	100.00%		H2QGB0              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for H2QGB0 as seed ortholog is 100%.

Group of orthologs #1798. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:108

Q5KC58              	100.00%		H2QY43              	100.00%
Bootstrap support for Q5KC58 as seed ortholog is 100%.
Bootstrap support for H2QY43 as seed ortholog is 100%.

Group of orthologs #1799. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.troglodytes:108

P0CP06              	100.00%		H2RGB8              	100.00%
Bootstrap support for P0CP06 as seed ortholog is 100%.
Bootstrap support for H2RGB8 as seed ortholog is 100%.

Group of orthologs #1800. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:107

P0CN72              	100.00%		H2Q8M7              	100.00%
Bootstrap support for P0CN72 as seed ortholog is 98%.
Bootstrap support for H2Q8M7 as seed ortholog is 100%.

Group of orthologs #1801. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.troglodytes:107

Q5KKD6              	100.00%		H2QTV3              	100.00%
Bootstrap support for Q5KKD6 as seed ortholog is 100%.
Bootstrap support for H2QTV3 as seed ortholog is 100%.

Group of orthologs #1802. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.troglodytes:107

Q5K7Y3              	100.00%		H2RBL2              	100.00%
Bootstrap support for Q5K7Y3 as seed ortholog is 100%.
Bootstrap support for H2RBL2 as seed ortholog is 100%.

Group of orthologs #1803. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KP52              	100.00%		H2QJK2              	100.00%
                    	       		H2Q1X9              	18.38%
                    	       		H2QTK3              	10.36%
                    	       		H2QC21              	9.83%
                    	       		H2R2M8              	7.37%
Bootstrap support for Q5KP52 as seed ortholog is 100%.
Bootstrap support for H2QJK2 as seed ortholog is 100%.

Group of orthologs #1804. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5K7T5              	100.00%		H2QAK3              	100.00%
                    	       		H2RE79              	42.30%
                    	       		H2R9K0              	41.99%
                    	       		H2R9K5              	40.79%
Bootstrap support for Q5K7T5 as seed ortholog is 100%.
Bootstrap support for H2QAK3 as seed ortholog is 100%.

Group of orthologs #1805. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KJ52              	100.00%		H2Q181              	100.00%
                    	       		H2QT33              	52.62%
                    	       		H2Q8P2              	29.36%
Bootstrap support for Q5KJ52 as seed ortholog is 100%.
Bootstrap support for H2Q181 as seed ortholog is 100%.

Group of orthologs #1806. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KDJ5              	100.00%		G2HEX1              	100.00%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for G2HEX1 as seed ortholog is 100%.

Group of orthologs #1807. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.troglodytes:106

Q5KJW8              	100.00%		H2PZT9              	100.00%
Bootstrap support for Q5KJW8 as seed ortholog is 99%.
Bootstrap support for H2PZT9 as seed ortholog is 100%.

Group of orthologs #1808. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KJN0              	100.00%		H2Q1M1              	100.00%
Bootstrap support for Q5KJN0 as seed ortholog is 100%.
Bootstrap support for H2Q1M1 as seed ortholog is 100%.

Group of orthologs #1809. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5K9N9              	100.00%		H2QJ84              	100.00%
Bootstrap support for Q5K9N9 as seed ortholog is 100%.
Bootstrap support for H2QJ84 as seed ortholog is 100%.

Group of orthologs #1810. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KBT9              	100.00%		H2QR75              	100.00%
Bootstrap support for Q5KBT9 as seed ortholog is 100%.
Bootstrap support for H2QR75 as seed ortholog is 100%.

Group of orthologs #1811. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KJP3              	100.00%		H2QM28              	100.00%
Bootstrap support for Q5KJP3 as seed ortholog is 100%.
Bootstrap support for H2QM28 as seed ortholog is 100%.

Group of orthologs #1812. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

P0CM68              	100.00%		H2RBJ7              	100.00%
Bootstrap support for P0CM68 as seed ortholog is 100%.
Bootstrap support for H2RBJ7 as seed ortholog is 100%.

Group of orthologs #1813. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5K8A9              	100.00%		H2R9V1              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 100%.
Bootstrap support for H2R9V1 as seed ortholog is 100%.

Group of orthologs #1814. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.troglodytes:106

Q5KHB8              	100.00%		H2R6J6              	100.00%
Bootstrap support for Q5KHB8 as seed ortholog is 100%.
Bootstrap support for H2R6J6 as seed ortholog is 100%.

Group of orthologs #1815. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:29 P.troglodytes:54

Q5KCB6              	100.00%		H2QYN3              	100.00%
Q5KDS1              	71.40%		
Q5KKB5              	42.15%		
Bootstrap support for Q5KCB6 as seed ortholog is 93%.
Bootstrap support for H2QYN3 as seed ortholog is 94%.

Group of orthologs #1816. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5KH57              	100.00%		H2R5E6              	100.00%
Q5KH47              	16.63%		H2QH66              	10.50%
Bootstrap support for Q5KH57 as seed ortholog is 100%.
Bootstrap support for H2R5E6 as seed ortholog is 100%.

Group of orthologs #1817. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5KJE9              	100.00%		H2Q991              	100.00%
                    	       		H2QIJ6              	34.10%
Bootstrap support for Q5KJE9 as seed ortholog is 100%.
Bootstrap support for H2Q991 as seed ortholog is 100%.

Group of orthologs #1818. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5KFC6              	100.00%		H2QSB7              	100.00%
                    	       		H2Q4I0              	20.37%
Bootstrap support for Q5KFC6 as seed ortholog is 100%.
Bootstrap support for H2QSB7 as seed ortholog is 100%.

Group of orthologs #1819. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5K973              	100.00%		B0YN54              	100.00%
Bootstrap support for Q5K973 as seed ortholog is 100%.
Bootstrap support for B0YN54 as seed ortholog is 100%.

Group of orthologs #1820. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5KKG0              	100.00%		H2Q394              	100.00%
Bootstrap support for Q5KKG0 as seed ortholog is 100%.
Bootstrap support for H2Q394 as seed ortholog is 100%.

Group of orthologs #1821. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:30

Q5KJM2              	100.00%		H2QAD1              	100.00%
Bootstrap support for Q5KJM2 as seed ortholog is 100%.
Bootstrap support for H2QAD1 as seed ortholog is 92%.

Group of orthologs #1822. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5KN38              	100.00%		H2Q9I6              	100.00%
Bootstrap support for Q5KN38 as seed ortholog is 100%.
Bootstrap support for H2Q9I6 as seed ortholog is 100%.

Group of orthologs #1823. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.troglodytes:105

Q5KD61              	100.00%		H2QT40              	100.00%
Bootstrap support for Q5KD61 as seed ortholog is 100%.
Bootstrap support for H2QT40 as seed ortholog is 100%.

Group of orthologs #1824. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.troglodytes:104

P0CM10              	100.00%		H2PZF8              	100.00%
Bootstrap support for P0CM10 as seed ortholog is 100%.
Bootstrap support for H2PZF8 as seed ortholog is 100%.

Group of orthologs #1825. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.troglodytes:104

Q5KE85              	100.00%		H2QXJ4              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for H2QXJ4 as seed ortholog is 100%.

Group of orthologs #1826. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.troglodytes:104

Q5KM88              	100.00%		H2QV73              	100.00%
Bootstrap support for Q5KM88 as seed ortholog is 100%.
Bootstrap support for H2QV73 as seed ortholog is 100%.

Group of orthologs #1827. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.troglodytes:104

Q5KBR8              	100.00%		H2R837              	100.00%
Bootstrap support for Q5KBR8 as seed ortholog is 100%.
Bootstrap support for H2R837 as seed ortholog is 100%.

Group of orthologs #1828. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.troglodytes:38

Q5KPW9              	100.00%		P0C8Z4              	100.00%
Bootstrap support for Q5KPW9 as seed ortholog is 100%.
Bootstrap support for P0C8Z4 as seed ortholog is 59%.
Alternative seed ortholog is G2HFJ8 (38 bits away from this cluster)

Group of orthologs #1829. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.troglodytes:103

Q5KCU3              	100.00%		H2QMN1              	100.00%
                    	       		H2QYI6              	20.12%
                    	       		H2QMN0              	12.78%
Bootstrap support for Q5KCU3 as seed ortholog is 100%.
Bootstrap support for H2QMN1 as seed ortholog is 100%.

Group of orthologs #1830. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.troglodytes:103

Q5KMS2              	100.00%		H2Q2W2              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for H2Q2W2 as seed ortholog is 100%.

Group of orthologs #1831. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.troglodytes:103

Q5KBD5              	100.00%		H2R880              	100.00%
Bootstrap support for Q5KBD5 as seed ortholog is 100%.
Bootstrap support for H2R880 as seed ortholog is 100%.

Group of orthologs #1832. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

P0CM92              	100.00%		H2PZ91              	100.00%
                    	       		H2R1D3              	51.47%
                    	       		H2QSP7              	39.63%
                    	       		H2R6G9              	10.68%
                    	       		H2PZF6              	8.62%
Bootstrap support for P0CM92 as seed ortholog is 100%.
Bootstrap support for H2PZ91 as seed ortholog is 100%.

Group of orthologs #1833. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:13

Q5K8B5              	100.00%		H2QBZ2              	100.00%
                    	       		H2QNK4              	36.42%
                    	       		H2QF29              	18.21%
Bootstrap support for Q5K8B5 as seed ortholog is 100%.
Bootstrap support for H2QBZ2 as seed ortholog is 56%.
Alternative seed ortholog is H2QIF9 (13 bits away from this cluster)

Group of orthologs #1834. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KDG2              	100.00%		H2QKE1              	100.00%
                    	       		H2Q817              	8.30%
Bootstrap support for Q5KDG2 as seed ortholog is 100%.
Bootstrap support for H2QKE1 as seed ortholog is 100%.

Group of orthologs #1835. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KLG3              	100.00%		H2QMC4              	100.00%
                    	       		H2QCZ9              	90.77%
Bootstrap support for Q5KLG3 as seed ortholog is 100%.
Bootstrap support for H2QMC4 as seed ortholog is 100%.

Group of orthologs #1836. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KPS7              	100.00%		H2QPD6              	100.00%
                    	       		H2RA26              	37.46%
Bootstrap support for Q5KPS7 as seed ortholog is 100%.
Bootstrap support for H2QPD6 as seed ortholog is 100%.

Group of orthologs #1837. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KG47              	100.00%		H2RA97              	100.00%
                    	       		H2RCH3              	24.37%
Bootstrap support for Q5KG47 as seed ortholog is 100%.
Bootstrap support for H2RA97 as seed ortholog is 100%.

Group of orthologs #1838. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5K8Y4              	100.00%		H2Q5S3              	100.00%
Bootstrap support for Q5K8Y4 as seed ortholog is 100%.
Bootstrap support for H2Q5S3 as seed ortholog is 100%.

Group of orthologs #1839. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

P0CS56              	100.00%		H2Q9B6              	100.00%
Bootstrap support for P0CS56 as seed ortholog is 100%.
Bootstrap support for H2Q9B6 as seed ortholog is 100%.

Group of orthologs #1840. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KF35              	100.00%		H2Q8B7              	100.00%
Bootstrap support for Q5KF35 as seed ortholog is 100%.
Bootstrap support for H2Q8B7 as seed ortholog is 100%.

Group of orthologs #1841. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KJ18              	100.00%		H2QG53              	100.00%
Bootstrap support for Q5KJ18 as seed ortholog is 100%.
Bootstrap support for H2QG53 as seed ortholog is 100%.

Group of orthologs #1842. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KDF4              	100.00%		H2QNU1              	100.00%
Bootstrap support for Q5KDF4 as seed ortholog is 100%.
Bootstrap support for H2QNU1 as seed ortholog is 100%.

Group of orthologs #1843. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KC16              	100.00%		H2QSV1              	100.00%
Bootstrap support for Q5KC16 as seed ortholog is 100%.
Bootstrap support for H2QSV1 as seed ortholog is 100%.

Group of orthologs #1844. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KHL3              	100.00%		H2QMP1              	100.00%
Bootstrap support for Q5KHL3 as seed ortholog is 100%.
Bootstrap support for H2QMP1 as seed ortholog is 100%.

Group of orthologs #1845. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.troglodytes:102

Q5KBY4              	100.00%		H2QT74              	100.00%
Bootstrap support for Q5KBY4 as seed ortholog is 100%.
Bootstrap support for H2QT74 as seed ortholog is 100%.

Group of orthologs #1846. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

Q5K965              	100.00%		H2Q9I4              	100.00%
Q5KC43              	55.56%		H2R900              	10.38%
Bootstrap support for Q5K965 as seed ortholog is 100%.
Bootstrap support for H2Q9I4 as seed ortholog is 100%.

Group of orthologs #1847. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

Q5K6Y2              	100.00%		H2Q666              	100.00%
                    	       		H2QJ51              	84.29%
Bootstrap support for Q5K6Y2 as seed ortholog is 100%.
Bootstrap support for H2Q666 as seed ortholog is 100%.

Group of orthologs #1848. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

Q5K8R9              	100.00%		H2PYQ2              	100.00%
Bootstrap support for Q5K8R9 as seed ortholog is 100%.
Bootstrap support for H2PYQ2 as seed ortholog is 100%.

Group of orthologs #1849. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

Q5K8K2              	100.00%		H2Q102              	100.00%
Bootstrap support for Q5K8K2 as seed ortholog is 100%.
Bootstrap support for H2Q102 as seed ortholog is 100%.

Group of orthologs #1850. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

Q5KIB6              	100.00%		H2PYU4              	100.00%
Bootstrap support for Q5KIB6 as seed ortholog is 100%.
Bootstrap support for H2PYU4 as seed ortholog is 100%.

Group of orthologs #1851. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

P0CM18              	100.00%		H2QD56              	100.00%
Bootstrap support for P0CM18 as seed ortholog is 100%.
Bootstrap support for H2QD56 as seed ortholog is 100%.

Group of orthologs #1852. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:9

Q5KLV2              	100.00%		H2PZJ7              	100.00%
Bootstrap support for Q5KLV2 as seed ortholog is 100%.
Bootstrap support for H2PZJ7 as seed ortholog is 51%.
Alternative seed ortholog is H2QX48 (9 bits away from this cluster)

Group of orthologs #1853. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.troglodytes:101

Q5KC98              	100.00%		H2QAT5              	100.00%
Bootstrap support for Q5KC98 as seed ortholog is 100%.
Bootstrap support for H2QAT5 as seed ortholog is 100%.

Group of orthologs #1854. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:100

Q5KH48              	100.00%		H2QI78              	100.00%
                    	       		H2QKY7              	24.71%
Bootstrap support for Q5KH48 as seed ortholog is 100%.
Bootstrap support for H2QI78 as seed ortholog is 100%.

Group of orthologs #1855. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:100

Q5KAW3              	100.00%		H2QUP5              	100.00%
                    	       		H2Q861              	8.98%
Bootstrap support for Q5KAW3 as seed ortholog is 100%.
Bootstrap support for H2QUP5 as seed ortholog is 100%.

Group of orthologs #1856. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:100

Q5KJY3              	100.00%		H2PY87              	100.00%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for H2PY87 as seed ortholog is 100%.

Group of orthologs #1857. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:100

P0CN16              	100.00%		H2QRB7              	100.00%
Bootstrap support for P0CN16 as seed ortholog is 100%.
Bootstrap support for H2QRB7 as seed ortholog is 100%.

Group of orthologs #1858. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:100

Q5KID6              	100.00%		H2QFU2              	100.00%
Bootstrap support for Q5KID6 as seed ortholog is 100%.
Bootstrap support for H2QFU2 as seed ortholog is 100%.

Group of orthologs #1859. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.troglodytes:100

Q5KKV0              	100.00%		H2R5V1              	100.00%
Bootstrap support for Q5KKV0 as seed ortholog is 100%.
Bootstrap support for H2R5V1 as seed ortholog is 100%.

Group of orthologs #1860. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:5

Q5KC60              	100.00%		H2R6J1              	100.00%
                    	       		H2QPS8              	9.78%
                    	       		A5A6H4              	9.13%
                    	       		H2RHE1              	8.87%
                    	       		H2RAN5              	7.82%
                    	       		H2RHB3              	6.78%
                    	       		H2QPS6              	6.78%
Bootstrap support for Q5KC60 as seed ortholog is 100%.
Bootstrap support for H2R6J1 as seed ortholog is 100%.

Group of orthologs #1861. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:99

Q5KE06              	100.00%		H2Q9T3              	100.00%
                    	       		H2Q077              	41.11%
                    	       		H2R0C9              	22.65%
                    	       		H2RHP3              	19.16%
Bootstrap support for Q5KE06 as seed ortholog is 100%.
Bootstrap support for H2Q9T3 as seed ortholog is 100%.

Group of orthologs #1862. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:99

Q5KEC6              	100.00%		G2HE12              	100.00%
                    	       		H2Q1G0              	28.72%
                    	       		H2RBK7              	25.04%
Bootstrap support for Q5KEC6 as seed ortholog is 100%.
Bootstrap support for G2HE12 as seed ortholog is 100%.

Group of orthologs #1863. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:99

Q5KB50              	100.00%		H2RC90              	100.00%
                    	       		H2QDD1              	29.60%
Bootstrap support for Q5KB50 as seed ortholog is 100%.
Bootstrap support for H2RC90 as seed ortholog is 100%.

Group of orthologs #1864. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:99

Q5K845              	100.00%		H2QWL7              	100.00%
Bootstrap support for Q5K845 as seed ortholog is 100%.
Bootstrap support for H2QWL7 as seed ortholog is 100%.

Group of orthologs #1865. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:99

Q5KHR8              	100.00%		H2QWV9              	100.00%
Bootstrap support for Q5KHR8 as seed ortholog is 100%.
Bootstrap support for H2QWV9 as seed ortholog is 100%.

Group of orthologs #1866. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.troglodytes:99

Q5KGR1              	100.00%		H2RI43              	100.00%
Bootstrap support for Q5KGR1 as seed ortholog is 100%.
Bootstrap support for H2RI43 as seed ortholog is 100%.

Group of orthologs #1867. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:16

Q5KLB1              	100.00%		H2R181              	100.00%
                    	       		H2QT76              	49.14%
                    	       		H2QTB3              	32.63%
                    	       		H2QQY3              	19.39%
                    	       		H2PYU9              	14.01%
Bootstrap support for Q5KLB1 as seed ortholog is 100%.
Bootstrap support for H2R181 as seed ortholog is 66%.
Alternative seed ortholog is H2Q2H0 (16 bits away from this cluster)

Group of orthologs #1868. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.troglodytes:98

Q5KEI5              	100.00%		H2QTJ8              	100.00%
Q5KHE7              	36.88%		H2Q6T7              	8.17%
Bootstrap support for Q5KEI5 as seed ortholog is 68%.
Alternative seed ortholog is Q5KFH1 (16 bits away from this cluster)
Bootstrap support for H2QTJ8 as seed ortholog is 100%.

Group of orthologs #1869. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:98

Q5K904              	100.00%		H2R303              	100.00%
                    	       		H2QGA4              	67.59%
Bootstrap support for Q5K904 as seed ortholog is 100%.
Bootstrap support for H2R303 as seed ortholog is 100%.

Group of orthologs #1870. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:98

Q5KJH4              	100.00%		H2RCW2              	100.00%
Q5KJH3              	15.47%		
Bootstrap support for Q5KJH4 as seed ortholog is 100%.
Bootstrap support for H2RCW2 as seed ortholog is 100%.

Group of orthologs #1871. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:98

Q5KCT8              	100.00%		H2Q0L9              	100.00%
Bootstrap support for Q5KCT8 as seed ortholog is 100%.
Bootstrap support for H2Q0L9 as seed ortholog is 100%.

Group of orthologs #1872. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:98

Q5KM51              	100.00%		H2QHP9              	100.00%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for H2QHP9 as seed ortholog is 100%.

Group of orthologs #1873. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.troglodytes:98

P0CN80              	100.00%		H2RIF2              	100.00%
Bootstrap support for P0CN80 as seed ortholog is 100%.
Bootstrap support for H2RIF2 as seed ortholog is 100%.

Group of orthologs #1874. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5KNW0              	100.00%		H2QNL7              	100.00%
                    	       		H2R0T0              	44.71%
                    	       		H2QNR5              	32.87%
Bootstrap support for Q5KNW0 as seed ortholog is 100%.
Bootstrap support for H2QNL7 as seed ortholog is 100%.

Group of orthologs #1875. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5KKA7              	100.00%		H2R458              	100.00%
Q5KKA8              	40.36%		
Bootstrap support for Q5KKA7 as seed ortholog is 100%.
Bootstrap support for H2R458 as seed ortholog is 100%.

Group of orthologs #1876. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5KIY8              	100.00%		H2Q6H1              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for H2Q6H1 as seed ortholog is 100%.

Group of orthologs #1877. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5KMK5              	100.00%		H2QJD3              	100.00%
Bootstrap support for Q5KMK5 as seed ortholog is 100%.
Bootstrap support for H2QJD3 as seed ortholog is 100%.

Group of orthologs #1878. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5K764              	100.00%		H2RA51              	100.00%
Bootstrap support for Q5K764 as seed ortholog is 100%.
Bootstrap support for H2RA51 as seed ortholog is 100%.

Group of orthologs #1879. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:37

P0CM60              	100.00%		H2RD05              	100.00%
Bootstrap support for P0CM60 as seed ortholog is 100%.
Bootstrap support for H2RD05 as seed ortholog is 69%.
Alternative seed ortholog is H2Q7K7 (37 bits away from this cluster)

Group of orthologs #1880. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5KPG0              	100.00%		H2QV68              	100.00%
Bootstrap support for Q5KPG0 as seed ortholog is 100%.
Bootstrap support for H2QV68 as seed ortholog is 100%.

Group of orthologs #1881. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.troglodytes:97

Q5KMJ0              	100.00%		H2R319              	100.00%
Bootstrap support for Q5KMJ0 as seed ortholog is 100%.
Bootstrap support for H2R319 as seed ortholog is 100%.

Group of orthologs #1882. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KEP0              	100.00%		H2QDQ9              	100.00%
Q5KEN9              	64.29%		H2QC20              	17.41%
Q5KEN8              	61.33%		H2Q290              	12.50%
Q5KEP1              	56.03%		
Q5KBZ7              	47.54%		
Bootstrap support for Q5KEP0 as seed ortholog is 100%.
Bootstrap support for H2QDQ9 as seed ortholog is 100%.

Group of orthologs #1883. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:9 P.troglodytes:19

Q5KK79              	100.00%		H2PZV7              	100.00%
Q5KCJ2              	6.12%		H2QR39              	60.00%
                    	       		H2QA40              	55.55%
Bootstrap support for Q5KK79 as seed ortholog is 64%.
Alternative seed ortholog is Q5KE69 (9 bits away from this cluster)
Bootstrap support for H2PZV7 as seed ortholog is 64%.
Alternative seed ortholog is H2QP79 (19 bits away from this cluster)

Group of orthologs #1884. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KE72              	100.00%		H2QQQ7              	100.00%
                    	       		H2PXX9              	31.22%
                    	       		H2Q0Z6              	8.37%
Bootstrap support for Q5KE72 as seed ortholog is 100%.
Bootstrap support for H2QQQ7 as seed ortholog is 100%.

Group of orthologs #1885. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KHM2              	100.00%		H2R488              	100.00%
                    	       		H2QJX1              	61.20%
                    	       		H2QJG2              	15.97%
Bootstrap support for Q5KHM2 as seed ortholog is 100%.
Bootstrap support for H2R488 as seed ortholog is 100%.

Group of orthologs #1886. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5K6Y4              	100.00%		H2R162              	100.00%
                    	       		H2QSY6              	6.47%
Bootstrap support for Q5K6Y4 as seed ortholog is 100%.
Bootstrap support for H2R162 as seed ortholog is 100%.

Group of orthologs #1887. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:3

Q5KCG2              	100.00%		H2QZV9              	100.00%
                    	       		H2QYK0              	38.16%
Bootstrap support for Q5KCG2 as seed ortholog is 100%.
Bootstrap support for H2QZV9 as seed ortholog is 42%.
Alternative seed ortholog is H2R1P1 (3 bits away from this cluster)

Group of orthologs #1888. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KM67              	100.00%		H2QU30              	100.00%
                    	       		H2R4A1              	17.46%
Bootstrap support for Q5KM67 as seed ortholog is 100%.
Bootstrap support for H2QU30 as seed ortholog is 100%.

Group of orthologs #1889. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KLZ6              	100.00%		B0VYX1              	100.00%
Bootstrap support for Q5KLZ6 as seed ortholog is 100%.
Bootstrap support for B0VYX1 as seed ortholog is 100%.

Group of orthologs #1890. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:5

Q5KP88              	100.00%		G2HIN0              	100.00%
Bootstrap support for Q5KP88 as seed ortholog is 100%.
Bootstrap support for G2HIN0 as seed ortholog is 54%.
Alternative seed ortholog is H2R6B6 (5 bits away from this cluster)

Group of orthologs #1891. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

P0CN54              	100.00%		H2QG88              	100.00%
Bootstrap support for P0CN54 as seed ortholog is 100%.
Bootstrap support for H2QG88 as seed ortholog is 100%.

Group of orthologs #1892. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5K900              	100.00%		H2QEW6              	100.00%
Bootstrap support for Q5K900 as seed ortholog is 100%.
Bootstrap support for H2QEW6 as seed ortholog is 100%.

Group of orthologs #1893. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5K8A6              	100.00%		H2QHI7              	100.00%
Bootstrap support for Q5K8A6 as seed ortholog is 100%.
Bootstrap support for H2QHI7 as seed ortholog is 100%.

Group of orthologs #1894. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KBB0              	100.00%		H2QW61              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for H2QW61 as seed ortholog is 100%.

Group of orthologs #1895. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KEW3              	100.00%		H2QTC9              	100.00%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for H2QTC9 as seed ortholog is 100%.

Group of orthologs #1896. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5K8A3              	100.00%		H2R0R3              	100.00%
Bootstrap support for Q5K8A3 as seed ortholog is 100%.
Bootstrap support for H2R0R3 as seed ortholog is 100%.

Group of orthologs #1897. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:51

Q5KB57              	100.00%		H2QY02              	100.00%
Bootstrap support for Q5KB57 as seed ortholog is 100%.
Bootstrap support for H2QY02 as seed ortholog is 93%.

Group of orthologs #1898. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KF63              	100.00%		H2QVC3              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for H2QVC3 as seed ortholog is 100%.

Group of orthologs #1899. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KF28              	100.00%		H2RA62              	100.00%
Bootstrap support for Q5KF28 as seed ortholog is 100%.
Bootstrap support for H2RA62 as seed ortholog is 100%.

Group of orthologs #1900. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.troglodytes:96

Q5KH04              	100.00%		H2RBS0              	100.00%
Bootstrap support for Q5KH04 as seed ortholog is 100%.
Bootstrap support for H2RBS0 as seed ortholog is 100%.

Group of orthologs #1901. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5K7D6              	100.00%		H2QQW7              	100.00%
                    	       		H2R580              	100.00%
                    	       		H2R7I9              	100.00%
                    	       		H2R7J0              	64.05%
                    	       		H2R0N7              	33.64%
                    	       		Q0EFA0              	22.68%
                    	       		H2R8A7              	22.04%
                    	       		H2R9A3              	17.25%
Bootstrap support for Q5K7D6 as seed ortholog is 100%.
Bootstrap support for H2QQW7 as seed ortholog is 100%.
Bootstrap support for H2R580 as seed ortholog is 100%.
Bootstrap support for H2R7I9 as seed ortholog is 100%.

Group of orthologs #1902. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.troglodytes:95

Q5KKQ5              	100.00%		H2QFM0              	100.00%
                    	       		H2QY49              	28.59%
                    	       		H2QSS2              	27.80%
                    	       		H2PZD9              	20.32%
                    	       		H2QLS0              	5.80%
                    	       		H2QAH3              	5.00%
Bootstrap support for Q5KKQ5 as seed ortholog is 49%.
Alternative seed ortholog is Q5KNI2 (16 bits away from this cluster)
Bootstrap support for H2QFM0 as seed ortholog is 100%.

Group of orthologs #1903. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5KL15              	100.00%		H2QXZ5              	100.00%
                    	       		H2R9R7              	14.65%
                    	       		H2RB59              	9.90%
                    	       		H2R5R8              	9.70%
                    	       		H2R5S2              	8.51%
Bootstrap support for Q5KL15 as seed ortholog is 100%.
Bootstrap support for H2QXZ5 as seed ortholog is 100%.

Group of orthologs #1904. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5K7J2              	100.00%		H2RH26              	100.00%
                    	       		H2QEH6              	44.34%
                    	       		H2PZU2              	40.00%
                    	       		H2QF03              	17.87%
Bootstrap support for Q5K7J2 as seed ortholog is 100%.
Bootstrap support for H2RH26 as seed ortholog is 100%.

Group of orthologs #1905. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5K970              	100.00%		H2QE90              	100.00%
                    	       		H2RCC8              	37.07%
Bootstrap support for Q5K970 as seed ortholog is 100%.
Bootstrap support for H2QE90 as seed ortholog is 100%.

Group of orthologs #1906. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5K753              	100.00%		H2RAZ7              	100.00%
                    	       		H2Q8Q5              	14.98%
Bootstrap support for Q5K753 as seed ortholog is 100%.
Bootstrap support for H2RAZ7 as seed ortholog is 100%.

Group of orthologs #1907. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5K865              	100.00%		H2QCP9              	100.00%
Bootstrap support for Q5K865 as seed ortholog is 100%.
Bootstrap support for H2QCP9 as seed ortholog is 100%.

Group of orthologs #1908. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5KI21              	100.00%		H2Q3V1              	100.00%
Bootstrap support for Q5KI21 as seed ortholog is 100%.
Bootstrap support for H2Q3V1 as seed ortholog is 100%.

Group of orthologs #1909. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5KCV8              	100.00%		H2QBC9              	100.00%
Bootstrap support for Q5KCV8 as seed ortholog is 100%.
Bootstrap support for H2QBC9 as seed ortholog is 100%.

Group of orthologs #1910. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.troglodytes:95

Q5KE91              	100.00%		H2QTM1              	100.00%
Bootstrap support for Q5KE91 as seed ortholog is 100%.
Bootstrap support for H2QTM1 as seed ortholog is 100%.

Group of orthologs #1911. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KHB4              	100.00%		H2QDV7              	100.00%
                    	       		H2QZQ9              	50.15%
                    	       		H2QTV9              	13.99%
                    	       		H2QN67              	11.95%
Bootstrap support for Q5KHB4 as seed ortholog is 100%.
Bootstrap support for H2QDV7 as seed ortholog is 100%.

Group of orthologs #1912. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KFL5              	100.00%		H2QG35              	100.00%
                    	       		H2R5U2              	7.55%
Bootstrap support for Q5KFL5 as seed ortholog is 100%.
Bootstrap support for H2QG35 as seed ortholog is 100%.

Group of orthologs #1913. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KHA3              	100.00%		H2R830              	100.00%
                    	       		H2Q1P4              	55.93%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for H2R830 as seed ortholog is 100%.

Group of orthologs #1914. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KCS9              	100.00%		H2PXU8              	100.00%
Bootstrap support for Q5KCS9 as seed ortholog is 100%.
Bootstrap support for H2PXU8 as seed ortholog is 100%.

Group of orthologs #1915. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KC84              	100.00%		H2Q3Z9              	100.00%
Bootstrap support for Q5KC84 as seed ortholog is 100%.
Bootstrap support for H2Q3Z9 as seed ortholog is 100%.

Group of orthologs #1916. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

P0CR84              	100.00%		H2Q9J2              	100.00%
Bootstrap support for P0CR84 as seed ortholog is 100%.
Bootstrap support for H2Q9J2 as seed ortholog is 100%.

Group of orthologs #1917. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KHA7              	100.00%		H2Q2P5              	100.00%
Bootstrap support for Q5KHA7 as seed ortholog is 100%.
Bootstrap support for H2Q2P5 as seed ortholog is 100%.

Group of orthologs #1918. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5K6X0              	100.00%		H2QG96              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 100%.
Bootstrap support for H2QG96 as seed ortholog is 100%.

Group of orthologs #1919. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KEE1              	100.00%		H2QF34              	100.00%
Bootstrap support for Q5KEE1 as seed ortholog is 100%.
Bootstrap support for H2QF34 as seed ortholog is 100%.

Group of orthologs #1920. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KA70              	100.00%		H2QU33              	100.00%
Bootstrap support for Q5KA70 as seed ortholog is 100%.
Bootstrap support for H2QU33 as seed ortholog is 100%.

Group of orthologs #1921. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KL55              	100.00%		H2QY06              	100.00%
Bootstrap support for Q5KL55 as seed ortholog is 100%.
Bootstrap support for H2QY06 as seed ortholog is 100%.

Group of orthologs #1922. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5K7N6              	100.00%		Q0MQH1              	100.00%
Bootstrap support for Q5K7N6 as seed ortholog is 100%.
Bootstrap support for Q0MQH1 as seed ortholog is 100%.

Group of orthologs #1923. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.troglodytes:94

Q5KLL3              	100.00%		H2RDE5              	100.00%
Bootstrap support for Q5KLL3 as seed ortholog is 100%.
Bootstrap support for H2RDE5 as seed ortholog is 100%.

Group of orthologs #1924. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.troglodytes:25

Q5KMP1              	100.00%		H2QYP6              	100.00%
                    	       		H2R156              	69.61%
                    	       		H2Q089              	50.62%
                    	       		H2R5L7              	19.35%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for H2QYP6 as seed ortholog is 98%.

Group of orthologs #1925. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.troglodytes:4

Q5KJ09              	100.00%		H2QLK0              	100.00%
                    	       		H2R9K3              	55.27%
                    	       		H2QDG7              	15.74%
Bootstrap support for Q5KJ09 as seed ortholog is 100%.
Bootstrap support for H2QLK0 as seed ortholog is 91%.

Group of orthologs #1926. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.troglodytes:93

Q5K6X6              	100.00%		H2QZG2              	100.00%
Bootstrap support for Q5K6X6 as seed ortholog is 100%.
Bootstrap support for H2QZG2 as seed ortholog is 100%.

Group of orthologs #1927. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KKY4              	100.00%		H2Q3Z8              	100.00%
                    	       		H2RFC7              	100.00%
Bootstrap support for Q5KKY4 as seed ortholog is 100%.
Bootstrap support for H2Q3Z8 as seed ortholog is 100%.
Bootstrap support for H2RFC7 as seed ortholog is 100%.

Group of orthologs #1928. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KE31              	100.00%		H2QKH2              	100.00%
Q5KB15              	27.79%		
Bootstrap support for Q5KE31 as seed ortholog is 100%.
Bootstrap support for H2QKH2 as seed ortholog is 100%.

Group of orthologs #1929. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:29 P.troglodytes:92

Q5KK55              	100.00%		H2QXP0              	100.00%
                    	       		H2R6G2              	5.60%
Bootstrap support for Q5KK55 as seed ortholog is 95%.
Bootstrap support for H2QXP0 as seed ortholog is 100%.

Group of orthologs #1930. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:13

Q5KD71              	100.00%		H2Q0L8              	100.00%
Bootstrap support for Q5KD71 as seed ortholog is 100%.
Bootstrap support for H2Q0L8 as seed ortholog is 86%.

Group of orthologs #1931. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KEA5              	100.00%		H2Q4E2              	100.00%
Bootstrap support for Q5KEA5 as seed ortholog is 100%.
Bootstrap support for H2Q4E2 as seed ortholog is 100%.

Group of orthologs #1932. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KCE2              	100.00%		H2QN02              	100.00%
Bootstrap support for Q5KCE2 as seed ortholog is 100%.
Bootstrap support for H2QN02 as seed ortholog is 100%.

Group of orthologs #1933. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KPP2              	100.00%		H2QBW8              	100.00%
Bootstrap support for Q5KPP2 as seed ortholog is 100%.
Bootstrap support for H2QBW8 as seed ortholog is 100%.

Group of orthologs #1934. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KCL2              	100.00%		H2QST1              	100.00%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for H2QST1 as seed ortholog is 100%.

Group of orthologs #1935. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KKZ0              	100.00%		H2QXY8              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 100%.
Bootstrap support for H2QXY8 as seed ortholog is 100%.

Group of orthologs #1936. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KDD0              	100.00%		H2R8V3              	100.00%
Bootstrap support for Q5KDD0 as seed ortholog is 100%.
Bootstrap support for H2R8V3 as seed ortholog is 100%.

Group of orthologs #1937. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.troglodytes:92

Q5KL70              	100.00%		H2R7K0              	100.00%
Bootstrap support for Q5KL70 as seed ortholog is 100%.
Bootstrap support for H2R7K0 as seed ortholog is 100%.

Group of orthologs #1938. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

P0CO24              	100.00%		H2QZ81              	100.00%
                    	       		H2QQF6              	66.98%
                    	       		H2QM67              	66.36%
                    	       		Q9N1Q7              	33.02%
                    	       		H2RHH9              	27.47%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for H2QZ81 as seed ortholog is 100%.

Group of orthologs #1939. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

P0CM06              	100.00%		H2Q279              	100.00%
                    	       		H2Q860              	76.25%
                    	       		H2QK00              	61.25%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for H2Q279 as seed ortholog is 100%.

Group of orthologs #1940. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

Q5K9E5              	100.00%		H2QP70              	100.00%
                    	       		H2QRR7              	26.33%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for H2QP70 as seed ortholog is 100%.

Group of orthologs #1941. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:35 P.troglodytes:51

Q5KQ66              	100.00%		H2QFP3              	100.00%
                    	       		H2QFH4              	18.04%
Bootstrap support for Q5KQ66 as seed ortholog is 64%.
Alternative seed ortholog is Q5K8D8 (35 bits away from this cluster)
Bootstrap support for H2QFP3 as seed ortholog is 87%.

Group of orthologs #1942. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

Q5KEC5              	100.00%		H2R288              	100.00%
                    	       		H2PYD1              	25.70%
Bootstrap support for Q5KEC5 as seed ortholog is 100%.
Bootstrap support for H2R288 as seed ortholog is 100%.

Group of orthologs #1943. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

Q5KGL2              	100.00%		H2R134              	100.00%
                    	       		H2QS27              	43.53%
Bootstrap support for Q5KGL2 as seed ortholog is 100%.
Bootstrap support for H2R134 as seed ortholog is 100%.

Group of orthologs #1944. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.troglodytes:91

P0CR24              	100.00%		H2QQ91              	100.00%
Bootstrap support for P0CR24 as seed ortholog is 95%.
Bootstrap support for H2QQ91 as seed ortholog is 100%.

Group of orthologs #1945. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

Q5KKH4              	100.00%		H2QFS2              	100.00%
Bootstrap support for Q5KKH4 as seed ortholog is 100%.
Bootstrap support for H2QFS2 as seed ortholog is 100%.

Group of orthologs #1946. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

Q5KI51              	100.00%		H2QKQ6              	100.00%
Bootstrap support for Q5KI51 as seed ortholog is 100%.
Bootstrap support for H2QKQ6 as seed ortholog is 100%.

Group of orthologs #1947. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.troglodytes:91

Q5K8W3              	100.00%		Q0MQB1              	100.00%
Bootstrap support for Q5K8W3 as seed ortholog is 100%.
Bootstrap support for Q0MQB1 as seed ortholog is 100%.

Group of orthologs #1948. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.troglodytes:90

P0CO34              	100.00%		H2QXG8              	100.00%
Bootstrap support for P0CO34 as seed ortholog is 100%.
Bootstrap support for H2QXG8 as seed ortholog is 100%.

Group of orthologs #1949. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.troglodytes:90

Q5KM48              	100.00%		H2QWN0              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 100%.
Bootstrap support for H2QWN0 as seed ortholog is 100%.

Group of orthologs #1950. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5KP76              	100.00%		H2QYT6              	100.00%
                    	       		H2Q7B4              	29.98%
Bootstrap support for Q5KP76 as seed ortholog is 100%.
Bootstrap support for H2QYT6 as seed ortholog is 100%.

Group of orthologs #1951. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5KBI3              	100.00%		H2RCN0              	100.00%
                    	       		H2R313              	52.97%
Bootstrap support for Q5KBI3 as seed ortholog is 100%.
Bootstrap support for H2RCN0 as seed ortholog is 100%.

Group of orthologs #1952. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5KG27              	100.00%		H2PZU3              	100.00%
Bootstrap support for Q5KG27 as seed ortholog is 100%.
Bootstrap support for H2PZU3 as seed ortholog is 100%.

Group of orthologs #1953. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5KLV4              	100.00%		H2QFE5              	100.00%
Bootstrap support for Q5KLV4 as seed ortholog is 100%.
Bootstrap support for H2QFE5 as seed ortholog is 100%.

Group of orthologs #1954. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

P0CO30              	100.00%		H2QY72              	100.00%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for H2QY72 as seed ortholog is 100%.

Group of orthologs #1955. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5KP20              	100.00%		H2QI32              	100.00%
Bootstrap support for Q5KP20 as seed ortholog is 100%.
Bootstrap support for H2QI32 as seed ortholog is 100%.

Group of orthologs #1956. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5K957              	100.00%		H2RF08              	100.00%
Bootstrap support for Q5K957 as seed ortholog is 100%.
Bootstrap support for H2RF08 as seed ortholog is 100%.

Group of orthologs #1957. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.troglodytes:89

Q5KMK6              	100.00%		H2RA83              	100.00%
Bootstrap support for Q5KMK6 as seed ortholog is 100%.
Bootstrap support for H2RA83 as seed ortholog is 100%.

Group of orthologs #1958. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:42

Q5KPB4              	100.00%		H2R019              	100.00%
                    	       		H2QIN5              	28.46%
                    	       		H2Q5Y0              	16.92%
Bootstrap support for Q5KPB4 as seed ortholog is 100%.
Bootstrap support for H2R019 as seed ortholog is 69%.
Alternative seed ortholog is H2QRS0 (42 bits away from this cluster)

Group of orthologs #1959. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:27

Q5KDD4              	100.00%		H2Q8R6              	100.00%
                    	       		H2RD95              	64.52%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for H2Q8R6 as seed ortholog is 67%.
Alternative seed ortholog is H2R2Q2 (27 bits away from this cluster)

Group of orthologs #1960. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:88

Q5KPM7              	100.00%		H2R7X0              	100.00%
                    	       		H2Q7H9              	34.97%
Bootstrap support for Q5KPM7 as seed ortholog is 100%.
Bootstrap support for H2R7X0 as seed ortholog is 100%.

Group of orthologs #1961. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:88

Q5KLA8              	100.00%		H2Q4E3              	100.00%
Bootstrap support for Q5KLA8 as seed ortholog is 100%.
Bootstrap support for H2Q4E3 as seed ortholog is 100%.

Group of orthologs #1962. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:88

Q5KAI3              	100.00%		H2QLS5              	100.00%
Bootstrap support for Q5KAI3 as seed ortholog is 100%.
Bootstrap support for H2QLS5 as seed ortholog is 100%.

Group of orthologs #1963. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:88

Q5KKC0              	100.00%		H2QHY4              	100.00%
Bootstrap support for Q5KKC0 as seed ortholog is 100%.
Bootstrap support for H2QHY4 as seed ortholog is 100%.

Group of orthologs #1964. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:45

Q5KBL5              	100.00%		H2QXT8              	100.00%
Bootstrap support for Q5KBL5 as seed ortholog is 100%.
Bootstrap support for H2QXT8 as seed ortholog is 98%.

Group of orthologs #1965. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.troglodytes:88

Q5KHJ3              	100.00%		H2RIH6              	100.00%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for H2RIH6 as seed ortholog is 100%.

Group of orthologs #1966. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.troglodytes:87

Q5KN92              	100.00%		H2QJA8              	100.00%
                    	       		H2Q6C6              	19.94%
                    	       		H2Q896              	5.13%
Bootstrap support for Q5KN92 as seed ortholog is 85%.
Bootstrap support for H2QJA8 as seed ortholog is 100%.

Group of orthologs #1967. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.troglodytes:87

Q5KL91              	100.00%		H2PYD5              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for H2PYD5 as seed ortholog is 100%.

Group of orthologs #1968. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.troglodytes:87

P0CN70              	100.00%		H2QV54              	100.00%
Bootstrap support for P0CN70 as seed ortholog is 100%.
Bootstrap support for H2QV54 as seed ortholog is 100%.

Group of orthologs #1969. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.troglodytes:87

Q5KAL4              	100.00%		H2QYT9              	100.00%
Bootstrap support for Q5KAL4 as seed ortholog is 100%.
Bootstrap support for H2QYT9 as seed ortholog is 100%.

Group of orthologs #1970. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.troglodytes:87

Q5KN63              	100.00%		H2QM39              	100.00%
Bootstrap support for Q5KN63 as seed ortholog is 100%.
Bootstrap support for H2QM39 as seed ortholog is 100%.

Group of orthologs #1971. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KG70              	100.00%		H2R6W8              	100.00%
                    	       		H2R9A5              	25.88%
                    	       		H2QKP4              	12.23%
Bootstrap support for Q5KG70 as seed ortholog is 100%.
Bootstrap support for H2R6W8 as seed ortholog is 100%.

Group of orthologs #1972. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:2 P.troglodytes:86

Q5KFN1              	100.00%		H2Q059              	100.00%
                    	       		H2QXF4              	67.82%
Bootstrap support for Q5KFN1 as seed ortholog is 54%.
Alternative seed ortholog is Q5KFD1 (2 bits away from this cluster)
Bootstrap support for H2Q059 as seed ortholog is 100%.

Group of orthologs #1973. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KDU9              	100.00%		H2RC26              	100.00%
                    	       		H2Q8H8              	7.58%
Bootstrap support for Q5KDU9 as seed ortholog is 100%.
Bootstrap support for H2RC26 as seed ortholog is 100%.

Group of orthologs #1974. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

P0CM90              	100.00%		H2Q3D0              	100.00%
Bootstrap support for P0CM90 as seed ortholog is 100%.
Bootstrap support for H2Q3D0 as seed ortholog is 100%.

Group of orthologs #1975. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KKF2              	100.00%		H2Q2K2              	100.00%
Bootstrap support for Q5KKF2 as seed ortholog is 100%.
Bootstrap support for H2Q2K2 as seed ortholog is 100%.

Group of orthologs #1976. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KPA8              	100.00%		H2Q196              	100.00%
Bootstrap support for Q5KPA8 as seed ortholog is 100%.
Bootstrap support for H2Q196 as seed ortholog is 100%.

Group of orthologs #1977. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KIT8              	100.00%		H2Q939              	100.00%
Bootstrap support for Q5KIT8 as seed ortholog is 100%.
Bootstrap support for H2Q939 as seed ortholog is 100%.

Group of orthologs #1978. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KA83              	100.00%		H2QMU6              	100.00%
Bootstrap support for Q5KA83 as seed ortholog is 100%.
Bootstrap support for H2QMU6 as seed ortholog is 100%.

Group of orthologs #1979. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

P0CM42              	100.00%		H2QZN2              	100.00%
Bootstrap support for P0CM42 as seed ortholog is 100%.
Bootstrap support for H2QZN2 as seed ortholog is 100%.

Group of orthologs #1980. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KI10              	100.00%		H2QY53              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for H2QY53 as seed ortholog is 100%.

Group of orthologs #1981. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5K7J0              	100.00%		Q0MQA2              	100.00%
Bootstrap support for Q5K7J0 as seed ortholog is 100%.
Bootstrap support for Q0MQA2 as seed ortholog is 100%.

Group of orthologs #1982. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KBR2              	100.00%		Q0MQ90              	100.00%
Bootstrap support for Q5KBR2 as seed ortholog is 100%.
Bootstrap support for Q0MQ90 as seed ortholog is 100%.

Group of orthologs #1983. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.troglodytes:86

Q5KI32              	100.00%		H2RET5              	100.00%
Bootstrap support for Q5KI32 as seed ortholog is 100%.
Bootstrap support for H2RET5 as seed ortholog is 100%.

Group of orthologs #1984. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:85

Q5KCI2              	100.00%		H2QCP4              	100.00%
                    	       		H2QA38              	44.41%
Bootstrap support for Q5KCI2 as seed ortholog is 100%.
Bootstrap support for H2QCP4 as seed ortholog is 100%.

Group of orthologs #1985. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:85

Q5KFN0              	100.00%		H2QAH9              	100.00%
                    	       		H2QLK1              	31.09%
Bootstrap support for Q5KFN0 as seed ortholog is 100%.
Bootstrap support for H2QAH9 as seed ortholog is 100%.

Group of orthologs #1986. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:85

Q07801              	100.00%		H2QR61              	100.00%
                    	       		H2QMZ1              	85.57%
Bootstrap support for Q07801 as seed ortholog is 100%.
Bootstrap support for H2QR61 as seed ortholog is 100%.

Group of orthologs #1987. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:24

Q5KJ70              	100.00%		H2QT68              	100.00%
                    	       		H2QSA6              	15.74%
Bootstrap support for Q5KJ70 as seed ortholog is 100%.
Bootstrap support for H2QT68 as seed ortholog is 78%.

Group of orthologs #1988. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:85

Q5KFI5              	100.00%		H2Q8F9              	100.00%
Bootstrap support for Q5KFI5 as seed ortholog is 100%.
Bootstrap support for H2Q8F9 as seed ortholog is 100%.

Group of orthologs #1989. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.troglodytes:27

P0CQ38              	100.00%		H2QHM5              	100.00%
Bootstrap support for P0CQ38 as seed ortholog is 67%.
Alternative seed ortholog is Q5K8I2 (16 bits away from this cluster)
Bootstrap support for H2QHM5 as seed ortholog is 84%.

Group of orthologs #1990. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:85

Q5K727              	100.00%		H2QWM7              	100.00%
Bootstrap support for Q5K727 as seed ortholog is 100%.
Bootstrap support for H2QWM7 as seed ortholog is 100%.

Group of orthologs #1991. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.troglodytes:85

Q5KGD9              	100.00%		Q0MQ87              	100.00%
Bootstrap support for Q5KGD9 as seed ortholog is 100%.
Bootstrap support for Q0MQ87 as seed ortholog is 100%.

Group of orthologs #1992. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KJQ6              	100.00%		H2Q4K1              	100.00%
Q5K7H5              	48.59%		H2QNJ9              	43.83%
Q5KAX9              	47.63%		H2R1R6              	26.93%
Q5KEA0              	10.06%		H2QZV8              	23.05%
Bootstrap support for Q5KJQ6 as seed ortholog is 100%.
Bootstrap support for H2Q4K1 as seed ortholog is 100%.

Group of orthologs #1993. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:38 P.troglodytes:21

P0CS04              	100.00%		H2PZ72              	100.00%
P0CS02              	56.78%		H2QXI6              	47.71%
Bootstrap support for P0CS04 as seed ortholog is 82%.
Bootstrap support for H2PZ72 as seed ortholog is 74%.
Alternative seed ortholog is H2R6T1 (21 bits away from this cluster)

Group of orthologs #1994. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KPF0              	100.00%		G2HG81              	100.00%
                    	       		H2QXW1              	60.09%
Bootstrap support for Q5KPF0 as seed ortholog is 100%.
Bootstrap support for G2HG81 as seed ortholog is 100%.

Group of orthologs #1995. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:2

Q5K9S2              	100.00%		H2QR22              	100.00%
                    	       		H2QFR7              	43.13%
Bootstrap support for Q5K9S2 as seed ortholog is 100%.
Bootstrap support for H2QR22 as seed ortholog is 71%.
Alternative seed ortholog is H2R904 (2 bits away from this cluster)

Group of orthologs #1996. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5K9F3              	100.00%		H2Q0I4              	100.00%
Bootstrap support for Q5K9F3 as seed ortholog is 100%.
Bootstrap support for H2Q0I4 as seed ortholog is 100%.

Group of orthologs #1997. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

P0CR32              	100.00%		H2Q3U3              	100.00%
Bootstrap support for P0CR32 as seed ortholog is 100%.
Bootstrap support for H2Q3U3 as seed ortholog is 100%.

Group of orthologs #1998. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5K9C3              	100.00%		H2Q2S1              	100.00%
Bootstrap support for Q5K9C3 as seed ortholog is 100%.
Bootstrap support for H2Q2S1 as seed ortholog is 100%.

Group of orthologs #1999. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KJZ1              	100.00%		H2Q3C8              	100.00%
Bootstrap support for Q5KJZ1 as seed ortholog is 100%.
Bootstrap support for H2Q3C8 as seed ortholog is 100%.

Group of orthologs #2000. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KNX9              	100.00%		H2Q0F8              	100.00%
Bootstrap support for Q5KNX9 as seed ortholog is 100%.
Bootstrap support for H2Q0F8 as seed ortholog is 100%.

Group of orthologs #2001. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KLY6              	100.00%		H2QHC9              	100.00%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for H2QHC9 as seed ortholog is 100%.

Group of orthologs #2002. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KJJ0              	100.00%		H2QMP3              	100.00%
Bootstrap support for Q5KJJ0 as seed ortholog is 100%.
Bootstrap support for H2QMP3 as seed ortholog is 100%.

Group of orthologs #2003. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KK86              	100.00%		H2QN66              	100.00%
Bootstrap support for Q5KK86 as seed ortholog is 100%.
Bootstrap support for H2QN66 as seed ortholog is 100%.

Group of orthologs #2004. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KBV3              	100.00%		H2RA13              	100.00%
Bootstrap support for Q5KBV3 as seed ortholog is 100%.
Bootstrap support for H2RA13 as seed ortholog is 100%.

Group of orthologs #2005. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.troglodytes:84

Q5KPP7              	100.00%		H2R3G1              	100.00%
Bootstrap support for Q5KPP7 as seed ortholog is 100%.
Bootstrap support for H2R3G1 as seed ortholog is 100%.

Group of orthologs #2006. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:83

Q5KFF8              	100.00%		H2QXR5              	100.00%
                    	       		Q1XHY9              	47.62%
                    	       		Q862Z6              	47.62%
                    	       		H2Q0U8              	28.57%
Bootstrap support for Q5KFF8 as seed ortholog is 100%.
Bootstrap support for H2QXR5 as seed ortholog is 100%.

Group of orthologs #2007. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:23

Q5KCF9              	100.00%		H2R078              	100.00%
                    	       		Q5IS56              	34.74%
                    	       		H2Q6B3              	15.21%
Bootstrap support for Q5KCF9 as seed ortholog is 100%.
Bootstrap support for H2R078 as seed ortholog is 53%.
Alternative seed ortholog is H2PZ25 (23 bits away from this cluster)

Group of orthologs #2008. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:17 P.troglodytes:83

Q5KHN2              	100.00%		H2Q3H7              	100.00%
Q5KM91              	100.00%		
Bootstrap support for Q5KHN2 as seed ortholog is 68%.
Alternative seed ortholog is Q5K7K2 (17 bits away from this cluster)
Bootstrap support for Q5KM91 as seed ortholog is 70%.
Alternative seed ortholog is Q5K7K2 (17 bits away from this cluster)
Bootstrap support for H2Q3H7 as seed ortholog is 100%.

Group of orthologs #2009. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:83

Q5KD64              	100.00%		H2QKQ1              	100.00%
                    	       		H2QG05              	37.76%
Bootstrap support for Q5KD64 as seed ortholog is 100%.
Bootstrap support for H2QKQ1 as seed ortholog is 100%.

Group of orthologs #2010. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:83

Q5KJX2              	100.00%		H2Q1Z2              	100.00%
Bootstrap support for Q5KJX2 as seed ortholog is 100%.
Bootstrap support for H2Q1Z2 as seed ortholog is 100%.

Group of orthologs #2011. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:83

Q5K8K6              	100.00%		H2QXZ1              	100.00%
Bootstrap support for Q5K8K6 as seed ortholog is 100%.
Bootstrap support for H2QXZ1 as seed ortholog is 100%.

Group of orthologs #2012. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:83

Q5K7E8              	100.00%		H2R9T0              	100.00%
Bootstrap support for Q5K7E8 as seed ortholog is 100%.
Bootstrap support for H2R9T0 as seed ortholog is 100%.

Group of orthologs #2013. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.troglodytes:83

Q5KI30              	100.00%		Q0MQC3              	100.00%
Bootstrap support for Q5KI30 as seed ortholog is 100%.
Bootstrap support for Q0MQC3 as seed ortholog is 100%.

Group of orthologs #2014. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5KAN8              	100.00%		H2QPQ4              	100.00%
Q5KP67              	7.66%		
Bootstrap support for Q5KAN8 as seed ortholog is 100%.
Bootstrap support for H2QPQ4 as seed ortholog is 100%.

Group of orthologs #2015. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5KNL0              	100.00%		H2QGF3              	100.00%
Q5K878              	42.23%		
Bootstrap support for Q5KNL0 as seed ortholog is 100%.
Bootstrap support for H2QGF3 as seed ortholog is 100%.

Group of orthologs #2016. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5K7W0              	100.00%		H2R081              	100.00%
                    	       		H2QGA5              	45.69%
Bootstrap support for Q5K7W0 as seed ortholog is 100%.
Bootstrap support for H2R081 as seed ortholog is 100%.

Group of orthologs #2017. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5K7S6              	100.00%		Q3I233              	100.00%
                    	       		H2RIB2              	19.57%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for Q3I233 as seed ortholog is 100%.

Group of orthologs #2018. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

P0CL90              	100.00%		H2QCR7              	100.00%
Bootstrap support for P0CL90 as seed ortholog is 100%.
Bootstrap support for H2QCR7 as seed ortholog is 100%.

Group of orthologs #2019. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

P0CR88              	100.00%		H2QBT5              	100.00%
Bootstrap support for P0CR88 as seed ortholog is 100%.
Bootstrap support for H2QBT5 as seed ortholog is 100%.

Group of orthologs #2020. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5K788              	100.00%		H2QG07              	100.00%
Bootstrap support for Q5K788 as seed ortholog is 100%.
Bootstrap support for H2QG07 as seed ortholog is 100%.

Group of orthologs #2021. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:6

P0CR42              	100.00%		H2QI43              	100.00%
Bootstrap support for P0CR42 as seed ortholog is 100%.
Bootstrap support for H2QI43 as seed ortholog is 39%.
Alternative seed ortholog is H2QIA9 (6 bits away from this cluster)

Group of orthologs #2022. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5KDZ6              	100.00%		H2QAW9              	100.00%
Bootstrap support for Q5KDZ6 as seed ortholog is 100%.
Bootstrap support for H2QAW9 as seed ortholog is 100%.

Group of orthologs #2023. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5K9V6              	100.00%		H2QRX5              	100.00%
Bootstrap support for Q5K9V6 as seed ortholog is 100%.
Bootstrap support for H2QRX5 as seed ortholog is 100%.

Group of orthologs #2024. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5K8Z9              	100.00%		H2R2Q0              	100.00%
Bootstrap support for Q5K8Z9 as seed ortholog is 100%.
Bootstrap support for H2R2Q0 as seed ortholog is 100%.

Group of orthologs #2025. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.troglodytes:82

Q5KJX4              	100.00%		H2RCS2              	100.00%
Bootstrap support for Q5KJX4 as seed ortholog is 100%.
Bootstrap support for H2RCS2 as seed ortholog is 100%.

Group of orthologs #2026. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KH31              	100.00%		G2HFX9              	100.00%
                    	       		H2QIA4              	38.81%
                    	       		H2QRK6              	38.58%
                    	       		H2RBI3              	36.53%
Bootstrap support for Q5KH31 as seed ortholog is 100%.
Bootstrap support for G2HFX9 as seed ortholog is 100%.

Group of orthologs #2027. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KGT0              	100.00%		H2Q2M8              	100.00%
Q5K977              	49.07%		H2R9W1              	62.53%
Bootstrap support for Q5KGT0 as seed ortholog is 100%.
Bootstrap support for H2Q2M8 as seed ortholog is 100%.

Group of orthologs #2028. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:3 P.troglodytes:81

Q5K825              	100.00%		H2PY70              	100.00%
                    	       		H2R1L9              	63.24%
Bootstrap support for Q5K825 as seed ortholog is 54%.
Alternative seed ortholog is Q5K978 (3 bits away from this cluster)
Bootstrap support for H2PY70 as seed ortholog is 100%.

Group of orthologs #2029. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KAG5              	100.00%		H2Q6C0              	100.00%
Bootstrap support for Q5KAG5 as seed ortholog is 100%.
Bootstrap support for H2Q6C0 as seed ortholog is 100%.

Group of orthologs #2030. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KNF3              	100.00%		H2Q0K6              	100.00%
Bootstrap support for Q5KNF3 as seed ortholog is 100%.
Bootstrap support for H2Q0K6 as seed ortholog is 100%.

Group of orthologs #2031. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KDZ7              	100.00%		H2QIH2              	100.00%
Bootstrap support for Q5KDZ7 as seed ortholog is 100%.
Bootstrap support for H2QIH2 as seed ortholog is 100%.

Group of orthologs #2032. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KCA2              	100.00%		H2QQA6              	100.00%
Bootstrap support for Q5KCA2 as seed ortholog is 100%.
Bootstrap support for H2QQA6 as seed ortholog is 100%.

Group of orthologs #2033. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5K9Z0              	100.00%		H2QUQ9              	100.00%
Bootstrap support for Q5K9Z0 as seed ortholog is 100%.
Bootstrap support for H2QUQ9 as seed ortholog is 100%.

Group of orthologs #2034. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KPN8              	100.00%		H2QZC1              	100.00%
Bootstrap support for Q5KPN8 as seed ortholog is 100%.
Bootstrap support for H2QZC1 as seed ortholog is 100%.

Group of orthologs #2035. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KPR2              	100.00%		H2RB90              	100.00%
Bootstrap support for Q5KPR2 as seed ortholog is 100%.
Bootstrap support for H2RB90 as seed ortholog is 100%.

Group of orthologs #2036. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KL57              	100.00%		H2RI68              	100.00%
Bootstrap support for Q5KL57 as seed ortholog is 100%.
Bootstrap support for H2RI68 as seed ortholog is 100%.

Group of orthologs #2037. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.troglodytes:81

Q5KNR5              	100.00%		Q0MQA5              	100.00%
Bootstrap support for Q5KNR5 as seed ortholog is 100%.
Bootstrap support for Q0MQA5 as seed ortholog is 100%.

Group of orthologs #2038. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:80

Q5KMS8              	100.00%		H2Q3I5              	100.00%
                    	       		H2QLU5              	51.95%
                    	       		H2QSU9              	26.73%
Bootstrap support for Q5KMS8 as seed ortholog is 100%.
Bootstrap support for H2Q3I5 as seed ortholog is 100%.

Group of orthologs #2039. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:80

Q5K9P9              	100.00%		H2PZQ0              	100.00%
Bootstrap support for Q5K9P9 as seed ortholog is 100%.
Bootstrap support for H2PZQ0 as seed ortholog is 100%.

Group of orthologs #2040. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:80

P0CN88              	100.00%		H2QZ05              	100.00%
Bootstrap support for P0CN88 as seed ortholog is 100%.
Bootstrap support for H2QZ05 as seed ortholog is 100%.

Group of orthologs #2041. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:80

P0CM28              	100.00%		H2R5G2              	100.00%
Bootstrap support for P0CM28 as seed ortholog is 100%.
Bootstrap support for H2R5G2 as seed ortholog is 100%.

Group of orthologs #2042. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.troglodytes:80

Q5KLY9              	100.00%		H2QY12              	100.00%
Bootstrap support for Q5KLY9 as seed ortholog is 100%.
Bootstrap support for H2QY12 as seed ortholog is 100%.

Group of orthologs #2043. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:79

Q5KMQ9              	100.00%		H2QQQ9              	100.00%
Q5KHS0              	11.72%		H2Q9Q2              	15.58%
                    	       		H2QF09              	13.47%
                    	       		H2R172              	10.91%
Bootstrap support for Q5KMQ9 as seed ortholog is 100%.
Bootstrap support for H2QQQ9 as seed ortholog is 100%.

Group of orthologs #2044. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:25

Q5KEY9              	100.00%		H2R2R5              	100.00%
                    	       		H2QI38              	34.73%
                    	       		H2Q2A1              	33.55%
Bootstrap support for Q5KEY9 as seed ortholog is 100%.
Bootstrap support for H2R2R5 as seed ortholog is 73%.
Alternative seed ortholog is H2Q9F5 (25 bits away from this cluster)

Group of orthologs #2045. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:79

Q5KL63              	100.00%		H2PYQ4              	100.00%
                    	       		H2QTE5              	84.51%
Bootstrap support for Q5KL63 as seed ortholog is 100%.
Bootstrap support for H2PYQ4 as seed ortholog is 100%.

Group of orthologs #2046. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:79

Q5KHQ2              	100.00%		H2R084              	100.00%
                    	       		H2QNX7              	53.12%
Bootstrap support for Q5KHQ2 as seed ortholog is 100%.
Bootstrap support for H2R084 as seed ortholog is 100%.

Group of orthologs #2047. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:79

Q5KCE1              	100.00%		H2QB28              	100.00%
Bootstrap support for Q5KCE1 as seed ortholog is 100%.
Bootstrap support for H2QB28 as seed ortholog is 100%.

Group of orthologs #2048. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.troglodytes:79

Q5KND5              	100.00%		H2QT92              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for H2QT92 as seed ortholog is 100%.

Group of orthologs #2049. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:78

Q5KM14              	100.00%		H2R1L0              	100.00%
Q5KBU7              	32.90%		H2R3F3              	32.34%
Q5KJE4              	23.66%		H2QBX6              	29.97%
Q5KF93              	18.95%		
Q5KFW3              	14.51%		
Q5KKE4              	9.98%		
Q5KJ69              	8.32%		
Q5K986              	8.04%		
Q5KBV0              	6.10%		
Bootstrap support for Q5KM14 as seed ortholog is 100%.
Bootstrap support for H2R1L0 as seed ortholog is 100%.

Group of orthologs #2050. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:78

Q5KCW6              	100.00%		H2QIW3              	100.00%
                    	       		H2QD12              	23.39%
                    	       		H2QX44              	16.57%
Bootstrap support for Q5KCW6 as seed ortholog is 100%.
Bootstrap support for H2QIW3 as seed ortholog is 100%.

Group of orthologs #2051. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:36 P.troglodytes:78

Q5KF26              	100.00%		H2QET7              	100.00%
Bootstrap support for Q5KF26 as seed ortholog is 77%.
Bootstrap support for H2QET7 as seed ortholog is 100%.

Group of orthologs #2052. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:78

Q5KPH9              	100.00%		H2Q8R5              	100.00%
Bootstrap support for Q5KPH9 as seed ortholog is 100%.
Bootstrap support for H2Q8R5 as seed ortholog is 100%.

Group of orthologs #2053. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:78

Q5KPR9              	100.00%		H2Q938              	100.00%
Bootstrap support for Q5KPR9 as seed ortholog is 100%.
Bootstrap support for H2Q938 as seed ortholog is 100%.

Group of orthologs #2054. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.troglodytes:78

Q5KLF3              	100.00%		H2QUM2              	100.00%
Bootstrap support for Q5KLF3 as seed ortholog is 100%.
Bootstrap support for H2QUM2 as seed ortholog is 100%.

Group of orthologs #2055. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5K7B8              	100.00%		H2Q2J3              	100.00%
                    	       		H2QS03              	22.74%
                    	       		H2QCK3              	5.99%
                    	       		H2QAW1              	5.56%
Bootstrap support for Q5K7B8 as seed ortholog is 100%.
Bootstrap support for H2Q2J3 as seed ortholog is 100%.

Group of orthologs #2056. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5KF64              	100.00%		H2PZQ5              	100.00%
Bootstrap support for Q5KF64 as seed ortholog is 100%.
Bootstrap support for H2PZQ5 as seed ortholog is 100%.

Group of orthologs #2057. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

P0CS00              	100.00%		H2QEW9              	100.00%
Bootstrap support for P0CS00 as seed ortholog is 100%.
Bootstrap support for H2QEW9 as seed ortholog is 100%.

Group of orthologs #2058. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5KNX8              	100.00%		H2Q083              	100.00%
Bootstrap support for Q5KNX8 as seed ortholog is 100%.
Bootstrap support for H2Q083 as seed ortholog is 100%.

Group of orthologs #2059. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5K8F3              	100.00%		H2QHF0              	100.00%
Bootstrap support for Q5K8F3 as seed ortholog is 100%.
Bootstrap support for H2QHF0 as seed ortholog is 100%.

Group of orthologs #2060. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5KAG7              	100.00%		H2R307              	100.00%
Bootstrap support for Q5KAG7 as seed ortholog is 100%.
Bootstrap support for H2R307 as seed ortholog is 100%.

Group of orthologs #2061. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5KLI5              	100.00%		H2QU32              	100.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for H2QU32 as seed ortholog is 100%.

Group of orthologs #2062. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.troglodytes:77

Q5KH50              	100.00%		H2R844              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for H2R844 as seed ortholog is 100%.

Group of orthologs #2063. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5KQ54              	100.00%		H2Q130              	100.00%
                    	       		H2Q3Y6              	41.48%
                    	       		H2R956              	40.44%
Bootstrap support for Q5KQ54 as seed ortholog is 100%.
Bootstrap support for H2Q130 as seed ortholog is 100%.

Group of orthologs #2064. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5K9F0              	100.00%		P0CG65              	100.00%
                    	       		H2RB72              	99.19%
                    	       		H2RAM8              	95.16%
Bootstrap support for Q5K9F0 as seed ortholog is 100%.
Bootstrap support for P0CG65 as seed ortholog is 100%.

Group of orthologs #2065. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5KBG2              	100.00%		H2QX09              	100.00%
                    	       		H2QF18              	21.46%
Bootstrap support for Q5KBG2 as seed ortholog is 100%.
Bootstrap support for H2QX09 as seed ortholog is 100%.

Group of orthologs #2066. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5K827              	100.00%		H2PXZ8              	100.00%
Bootstrap support for Q5K827 as seed ortholog is 100%.
Bootstrap support for H2PXZ8 as seed ortholog is 100%.

Group of orthologs #2067. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5K9K0              	100.00%		H2Q277              	100.00%
Bootstrap support for Q5K9K0 as seed ortholog is 100%.
Bootstrap support for H2Q277 as seed ortholog is 100%.

Group of orthologs #2068. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5K8Z8              	100.00%		H2QIM2              	100.00%
Bootstrap support for Q5K8Z8 as seed ortholog is 100%.
Bootstrap support for H2QIM2 as seed ortholog is 100%.

Group of orthologs #2069. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

Q5KIN2              	100.00%		H2QR48              	100.00%
Bootstrap support for Q5KIN2 as seed ortholog is 100%.
Bootstrap support for H2QR48 as seed ortholog is 100%.

Group of orthologs #2070. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.troglodytes:76

P0CM86              	100.00%		H2RE53              	100.00%
Bootstrap support for P0CM86 as seed ortholog is 100%.
Bootstrap support for H2RE53 as seed ortholog is 100%.

Group of orthologs #2071. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.troglodytes:18

Q5KBN1              	100.00%		H2QAN5              	100.00%
Q5KEW1              	29.25%		
Bootstrap support for Q5KBN1 as seed ortholog is 100%.
Bootstrap support for H2QAN5 as seed ortholog is 66%.
Alternative seed ortholog is H2R1L4 (18 bits away from this cluster)

Group of orthologs #2072. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.troglodytes:28

Q5K9W5              	100.00%		H2QKP1              	100.00%
                    	       		H2QEA2              	23.15%
Bootstrap support for Q5K9W5 as seed ortholog is 100%.
Bootstrap support for H2QKP1 as seed ortholog is 85%.

Group of orthologs #2073. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.troglodytes:75

Q5KJM9              	100.00%		H2QYE7              	100.00%
                    	       		H2QC51              	23.67%
Bootstrap support for Q5KJM9 as seed ortholog is 100%.
Bootstrap support for H2QYE7 as seed ortholog is 100%.

Group of orthologs #2074. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.troglodytes:75

Q5KCR0              	100.00%		H2Q936              	100.00%
Bootstrap support for Q5KCR0 as seed ortholog is 100%.
Bootstrap support for H2Q936 as seed ortholog is 100%.

Group of orthologs #2075. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.troglodytes:75

P0CR20              	100.00%		H2QT17              	100.00%
Bootstrap support for P0CR20 as seed ortholog is 100%.
Bootstrap support for H2QT17 as seed ortholog is 100%.

Group of orthologs #2076. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.troglodytes:75

Q5K7S8              	100.00%		Q0MQH7              	100.00%
Bootstrap support for Q5K7S8 as seed ortholog is 100%.
Bootstrap support for Q0MQH7 as seed ortholog is 100%.

Group of orthologs #2077. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:24

Q5KIC6              	100.00%		H2QWB2              	100.00%
                    	       		H2QKE2              	53.32%
                    	       		H2Q6I0              	9.13%
                    	       		H2Q6H8              	8.30%
                    	       		H2QT57              	7.26%
Bootstrap support for Q5KIC6 as seed ortholog is 100%.
Bootstrap support for H2QWB2 as seed ortholog is 73%.
Alternative seed ortholog is H2RHN7 (24 bits away from this cluster)

Group of orthologs #2078. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:20

Q5KH40              	100.00%		H2RDZ0              	100.00%
                    	       		H2QIQ7              	49.05%
                    	       		H2R2Z7              	44.93%
Bootstrap support for Q5KH40 as seed ortholog is 100%.
Bootstrap support for H2RDZ0 as seed ortholog is 67%.
Alternative seed ortholog is H2QMT7 (20 bits away from this cluster)

Group of orthologs #2079. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:74

Q5KIY4              	100.00%		H2Q0Z4              	100.00%
                    	       		H2QTK4              	6.83%
Bootstrap support for Q5KIY4 as seed ortholog is 100%.
Bootstrap support for H2Q0Z4 as seed ortholog is 100%.

Group of orthologs #2080. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:74

Q5KMN2              	100.00%		H2QCP1              	100.00%
                    	       		H2Q727              	30.21%
Bootstrap support for Q5KMN2 as seed ortholog is 100%.
Bootstrap support for H2QCP1 as seed ortholog is 100%.

Group of orthologs #2081. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:74

Q5K8K8              	100.00%		H2QIA2              	100.00%
Bootstrap support for Q5K8K8 as seed ortholog is 100%.
Bootstrap support for H2QIA2 as seed ortholog is 100%.

Group of orthologs #2082. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:74

Q5KHE4              	100.00%		H2QPG9              	100.00%
Bootstrap support for Q5KHE4 as seed ortholog is 100%.
Bootstrap support for H2QPG9 as seed ortholog is 100%.

Group of orthologs #2083. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.troglodytes:74

Q5KHC1              	100.00%		H2QWL6              	100.00%
Bootstrap support for Q5KHC1 as seed ortholog is 100%.
Bootstrap support for H2QWL6 as seed ortholog is 100%.

Group of orthologs #2084. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.troglodytes:73

Q5KA20              	100.00%		H2QI24              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 100%.
Bootstrap support for H2QI24 as seed ortholog is 100%.

Group of orthologs #2085. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.troglodytes:73

Q5KIS8              	100.00%		H2QGV5              	100.00%
Bootstrap support for Q5KIS8 as seed ortholog is 100%.
Bootstrap support for H2QGV5 as seed ortholog is 100%.

Group of orthologs #2086. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.troglodytes:73

Q5KM41              	100.00%		H2QP56              	100.00%
Bootstrap support for Q5KM41 as seed ortholog is 100%.
Bootstrap support for H2QP56 as seed ortholog is 100%.

Group of orthologs #2087. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KEX6              	100.00%		H2R388              	100.00%
                    	       		H2Q1R5              	30.48%
                    	       		H2QE98              	25.06%
                    	       		H2R3G5              	24.23%
                    	       		H2R3X6              	22.81%
                    	       		H2R1Q8              	19.59%
                    	       		H2QXB0              	18.62%
                    	       		H2QW47              	12.18%
                    	       		H2R3T8              	12.05%
                    	       		H2Q1R9              	11.73%
                    	       		H2R2I9              	10.37%
Bootstrap support for Q5KEX6 as seed ortholog is 100%.
Bootstrap support for H2R388 as seed ortholog is 100%.

Group of orthologs #2088. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:22

Q5K7H9              	100.00%		G2HEI1              	100.00%
                    	       		H2Q2J8              	59.29%
Bootstrap support for Q5K7H9 as seed ortholog is 100%.
Bootstrap support for G2HEI1 as seed ortholog is 74%.
Alternative seed ortholog is H2R4G9 (22 bits away from this cluster)

Group of orthologs #2089. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KE76              	100.00%		H2Q1D4              	100.00%
                    	       		H2R0M3              	26.51%
Bootstrap support for Q5KE76 as seed ortholog is 100%.
Bootstrap support for H2Q1D4 as seed ortholog is 100%.

Group of orthologs #2090. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5K8S0              	100.00%		H2QBD3              	100.00%
                    	       		H2QBD9              	38.08%
Bootstrap support for Q5K8S0 as seed ortholog is 100%.
Bootstrap support for H2QBD3 as seed ortholog is 100%.

Group of orthologs #2091. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KLS9              	100.00%		H2Q0G5              	100.00%
                    	       		H2RHY5              	100.00%
Bootstrap support for Q5KLS9 as seed ortholog is 100%.
Bootstrap support for H2Q0G5 as seed ortholog is 100%.
Bootstrap support for H2RHY5 as seed ortholog is 100%.

Group of orthologs #2092. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KCH4              	100.00%		H2QRM6              	100.00%
Bootstrap support for Q5KCH4 as seed ortholog is 100%.
Bootstrap support for H2QRM6 as seed ortholog is 100%.

Group of orthologs #2093. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KLT2              	100.00%		H2QI56              	100.00%
Bootstrap support for Q5KLT2 as seed ortholog is 100%.
Bootstrap support for H2QI56 as seed ortholog is 100%.

Group of orthologs #2094. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KNM3              	100.00%		H2QT07              	100.00%
Bootstrap support for Q5KNM3 as seed ortholog is 100%.
Bootstrap support for H2QT07 as seed ortholog is 100%.

Group of orthologs #2095. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.troglodytes:72

Q5KNI8              	100.00%		H2RI32              	100.00%
Bootstrap support for Q5KNI8 as seed ortholog is 100%.
Bootstrap support for H2RI32 as seed ortholog is 100%.

Group of orthologs #2096. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:6

Q5KQ37              	100.00%		H2QXN2              	100.00%
                    	       		H2RB30              	11.45%
                    	       		H2Q7N0              	10.50%
                    	       		H2R432              	9.44%
                    	       		H2PYV8              	6.68%
                    	       		H2RBQ2              	5.41%
Bootstrap support for Q5KQ37 as seed ortholog is 100%.
Bootstrap support for H2QXN2 as seed ortholog is 67%.
Alternative seed ortholog is H2QVV4 (6 bits away from this cluster)

Group of orthologs #2097. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5K8W4              	100.00%		H2QM94              	100.00%
                    	       		H2QCU2              	80.38%
                    	       		H2QQN9              	13.58%
                    	       		H2Q568              	11.07%
                    	       		H2QTF8              	6.29%
Bootstrap support for Q5K8W4 as seed ortholog is 100%.
Bootstrap support for H2QM94 as seed ortholog is 100%.

Group of orthologs #2098. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5K7N1              	100.00%		H2R447              	100.00%
Q5KMW9              	12.53%		
Q5KKK7              	12.53%		
Q5KBZ5              	7.61%		
Bootstrap support for Q5K7N1 as seed ortholog is 100%.
Bootstrap support for H2R447 as seed ortholog is 100%.

Group of orthologs #2099. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5KK76              	100.00%		H2Q0Q9              	100.00%
Q5KDS4              	15.68%		
Q5KBM7              	9.32%		
Bootstrap support for Q5KK76 as seed ortholog is 100%.
Bootstrap support for H2Q0Q9 as seed ortholog is 100%.

Group of orthologs #2100. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

P0CN38              	100.00%		H2Q6C7              	100.00%
Bootstrap support for P0CN38 as seed ortholog is 100%.
Bootstrap support for H2Q6C7 as seed ortholog is 100%.

Group of orthologs #2101. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5KGS8              	100.00%		H2QHP0              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for H2QHP0 as seed ortholog is 100%.

Group of orthologs #2102. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5KJN7              	100.00%		H2QF45              	100.00%
Bootstrap support for Q5KJN7 as seed ortholog is 100%.
Bootstrap support for H2QF45 as seed ortholog is 100%.

Group of orthologs #2103. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5K7T8              	100.00%		H2QVR3              	100.00%
Bootstrap support for Q5K7T8 as seed ortholog is 100%.
Bootstrap support for H2QVR3 as seed ortholog is 100%.

Group of orthologs #2104. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5KL90              	100.00%		H2QL92              	100.00%
Bootstrap support for Q5KL90 as seed ortholog is 100%.
Bootstrap support for H2QL92 as seed ortholog is 100%.

Group of orthologs #2105. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

P0CP04              	100.00%		H2RA31              	100.00%
Bootstrap support for P0CP04 as seed ortholog is 100%.
Bootstrap support for H2RA31 as seed ortholog is 100%.

Group of orthologs #2106. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.troglodytes:71

Q5KJ14              	100.00%		H2RI83              	100.00%
Bootstrap support for Q5KJ14 as seed ortholog is 100%.
Bootstrap support for H2RI83 as seed ortholog is 100%.

Group of orthologs #2107. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:70

Q5KPJ0              	100.00%		H2QAI7              	100.00%
Q5KJD9              	19.05%		
Q5KFL3              	13.00%		
Bootstrap support for Q5KPJ0 as seed ortholog is 100%.
Bootstrap support for H2QAI7 as seed ortholog is 100%.

Group of orthologs #2108. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:70

Q5KAA8              	100.00%		H2QF39              	100.00%
                    	       		H2QQS2              	15.73%
Bootstrap support for Q5KAA8 as seed ortholog is 100%.
Bootstrap support for H2QF39 as seed ortholog is 100%.

Group of orthologs #2109. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:70

Q5KJK7              	100.00%		H2Q8N3              	100.00%
Bootstrap support for Q5KJK7 as seed ortholog is 100%.
Bootstrap support for H2Q8N3 as seed ortholog is 100%.

Group of orthologs #2110. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.troglodytes:70

Q5KPT6              	100.00%		H2R0I3              	100.00%
Bootstrap support for Q5KPT6 as seed ortholog is 100%.
Bootstrap support for H2R0I3 as seed ortholog is 100%.

Group of orthologs #2111. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KI02              	100.00%		H2QTA2              	100.00%
Q5KBE7              	100.00%		H2R3D0              	100.00%
Q5KHX6              	61.87%		H2Q6P5              	72.29%
Q5KKS6              	51.55%		H2QGU8              	38.22%
Q5K9T2              	26.43%		H2QSE8              	29.77%
Q5KA87              	23.62%		H2QSE6              	28.92%
Q5KBM4              	23.02%		H2R1I2              	25.85%
Q5KC55              	21.12%		H2QSE7              	25.21%
Q5KNP3              	19.62%		H2R4C2              	11.02%
Q5KKU1              	19.22%		
Q5K7A1              	17.61%		
Q5KEM4              	17.12%		
Q5KHF5              	14.89%		
Q5K7L4              	14.89%		
Q5KPG5              	13.38%		
Q5K886              	13.31%		
Q5K875              	12.98%		
Q5K7F5              	11.17%		
Q5KA09              	10.41%		
Q5K9X4              	10.26%		
Q5KQ74              	10.26%		
Q5KN93              	9.81%		
Q5KG03              	8.95%		
Q5K928              	8.91%		
Q5KL40              	8.51%		
Q5K984              	8.31%		
Q5KNB7              	8.25%		
Q5KEI1              	8.21%		
Q5KJE6              	8.01%		
Q5KFM8              	7.95%		
Q5KAT7              	7.51%		
Q5KDY2              	7.11%		
Q5KB76              	7.04%		
Q5K9A2              	6.84%		
Q5KFK2              	6.31%		
Q5KC83              	6.11%		
Q5K860              	5.73%		
Q5KFK1              	5.63%		
Q5KER3              	5.63%		
Q5KGY8              	5.61%		
Bootstrap support for Q5KI02 as seed ortholog is 100%.
Bootstrap support for Q5KBE7 as seed ortholog is 100%.
Bootstrap support for H2QTA2 as seed ortholog is 100%.
Bootstrap support for H2R3D0 as seed ortholog is 100%.

Group of orthologs #2112. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:24

Q5KBN3              	100.00%		H2Q928              	100.00%
                    	       		H2RES0              	27.41%
                    	       		Q19A40              	25.90%
                    	       		H2Q622              	14.93%
                    	       		H2R6E5              	14.56%
                    	       		H2QN98              	10.40%
                    	       		H2QAV5              	5.67%
                    	       		H2QXI7              	5.29%
Bootstrap support for Q5KBN3 as seed ortholog is 100%.
Bootstrap support for H2Q928 as seed ortholog is 81%.

Group of orthologs #2113. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KCB7              	100.00%		H2QYI5              	100.00%
Q5KFA9              	6.44%		
Bootstrap support for Q5KCB7 as seed ortholog is 100%.
Bootstrap support for H2QYI5 as seed ortholog is 100%.

Group of orthologs #2114. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KIV8              	100.00%		H2R1H0              	100.00%
                    	       		H2QFI5              	48.36%
Bootstrap support for Q5KIV8 as seed ortholog is 100%.
Bootstrap support for H2R1H0 as seed ortholog is 100%.

Group of orthologs #2115. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KL85              	100.00%		H2RG60              	100.00%
                    	       		H2QL52              	90.55%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for H2RG60 as seed ortholog is 100%.

Group of orthologs #2116. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

P0CP40              	100.00%		H2Q0I0              	100.00%
Bootstrap support for P0CP40 as seed ortholog is 100%.
Bootstrap support for H2Q0I0 as seed ortholog is 100%.

Group of orthologs #2117. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

P0CQ28              	100.00%		H2QK44              	100.00%
Bootstrap support for P0CQ28 as seed ortholog is 100%.
Bootstrap support for H2QK44 as seed ortholog is 100%.

Group of orthologs #2118. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KFM1              	100.00%		H2QFP1              	100.00%
Bootstrap support for Q5KFM1 as seed ortholog is 100%.
Bootstrap support for H2QFP1 as seed ortholog is 100%.

Group of orthologs #2119. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KMT7              	100.00%		H2QJ09              	100.00%
Bootstrap support for Q5KMT7 as seed ortholog is 100%.
Bootstrap support for H2QJ09 as seed ortholog is 100%.

Group of orthologs #2120. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KIX6              	100.00%		H2QZM0              	100.00%
Bootstrap support for Q5KIX6 as seed ortholog is 100%.
Bootstrap support for H2QZM0 as seed ortholog is 100%.

Group of orthologs #2121. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:69

Q5KFV7              	100.00%		H2R493              	100.00%
Bootstrap support for Q5KFV7 as seed ortholog is 100%.
Bootstrap support for H2R493 as seed ortholog is 100%.

Group of orthologs #2122. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.troglodytes:6

Q5KIY1              	100.00%		H2R8A9              	100.00%
Bootstrap support for Q5KIY1 as seed ortholog is 100%.
Bootstrap support for H2R8A9 as seed ortholog is 63%.
Alternative seed ortholog is H2QR90 (6 bits away from this cluster)

Group of orthologs #2123. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.troglodytes:68

P0CR98              	100.00%		H2Q3P1              	100.00%
Bootstrap support for P0CR98 as seed ortholog is 100%.
Bootstrap support for H2Q3P1 as seed ortholog is 100%.

Group of orthologs #2124. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.troglodytes:68

Q5KH89              	100.00%		H2Q3A7              	100.00%
Bootstrap support for Q5KH89 as seed ortholog is 100%.
Bootstrap support for H2Q3A7 as seed ortholog is 100%.

Group of orthologs #2125. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KEZ0              	100.00%		H2QI58              	100.00%
                    	       		H2QPP1              	65.06%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for H2QI58 as seed ortholog is 100%.

Group of orthologs #2126. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KFM9              	100.00%		H2R5S8              	100.00%
                    	       		H2Q128              	8.45%
Bootstrap support for Q5KFM9 as seed ortholog is 100%.
Bootstrap support for H2R5S8 as seed ortholog is 100%.

Group of orthologs #2127. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KEZ4              	100.00%		G2HFD7              	100.00%
Bootstrap support for Q5KEZ4 as seed ortholog is 100%.
Bootstrap support for G2HFD7 as seed ortholog is 100%.

Group of orthologs #2128. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5K9K3              	100.00%		H2QD27              	100.00%
Bootstrap support for Q5K9K3 as seed ortholog is 100%.
Bootstrap support for H2QD27 as seed ortholog is 100%.

Group of orthologs #2129. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KDB8              	100.00%		H2QC78              	100.00%
Bootstrap support for Q5KDB8 as seed ortholog is 100%.
Bootstrap support for H2QC78 as seed ortholog is 100%.

Group of orthologs #2130. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KK48              	100.00%		H2QEV2              	100.00%
Bootstrap support for Q5KK48 as seed ortholog is 100%.
Bootstrap support for H2QEV2 as seed ortholog is 100%.

Group of orthologs #2131. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KJ61              	100.00%		H2QII0              	100.00%
Bootstrap support for Q5KJ61 as seed ortholog is 100%.
Bootstrap support for H2QII0 as seed ortholog is 100%.

Group of orthologs #2132. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5K8M0              	100.00%		H2R032              	100.00%
Bootstrap support for Q5K8M0 as seed ortholog is 100%.
Bootstrap support for H2R032 as seed ortholog is 100%.

Group of orthologs #2133. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KK46              	100.00%		H2R1P3              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for H2R1P3 as seed ortholog is 100%.

Group of orthologs #2134. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.troglodytes:67

Q5KCT7              	100.00%		H2RA60              	100.00%
Bootstrap support for Q5KCT7 as seed ortholog is 100%.
Bootstrap support for H2RA60 as seed ortholog is 100%.

Group of orthologs #2135. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5KMX0              	100.00%		H2QCK0              	100.00%
Q5KJN2              	40.96%		
Q5K8N5              	8.76%		
Q5K874              	5.37%		
Bootstrap support for Q5KMX0 as seed ortholog is 100%.
Bootstrap support for H2QCK0 as seed ortholog is 100%.

Group of orthologs #2136. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5KH14              	100.00%		H2QJ70              	100.00%
                    	       		H2Q684              	54.37%
Bootstrap support for Q5KH14 as seed ortholog is 100%.
Bootstrap support for H2QJ70 as seed ortholog is 100%.

Group of orthologs #2137. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5KPR0              	100.00%		H2QZH7              	100.00%
                    	       		H2RBM9              	37.35%
Bootstrap support for Q5KPR0 as seed ortholog is 100%.
Bootstrap support for H2QZH7 as seed ortholog is 100%.

Group of orthologs #2138. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5K9G7              	100.00%		H2QAQ4              	100.00%
Bootstrap support for Q5K9G7 as seed ortholog is 100%.
Bootstrap support for H2QAQ4 as seed ortholog is 100%.

Group of orthologs #2139. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5K9F6              	100.00%		H2QHL6              	100.00%
Bootstrap support for Q5K9F6 as seed ortholog is 100%.
Bootstrap support for H2QHL6 as seed ortholog is 100%.

Group of orthologs #2140. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5KDI4              	100.00%		H2QI18              	100.00%
Bootstrap support for Q5KDI4 as seed ortholog is 100%.
Bootstrap support for H2QI18 as seed ortholog is 100%.

Group of orthologs #2141. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5K8Y9              	100.00%		H2R2X6              	100.00%
Bootstrap support for Q5K8Y9 as seed ortholog is 100%.
Bootstrap support for H2R2X6 as seed ortholog is 100%.

Group of orthologs #2142. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.troglodytes:66

Q5KKH5              	100.00%		Q1XHV8              	100.00%
Bootstrap support for Q5KKH5 as seed ortholog is 100%.
Bootstrap support for Q1XHV8 as seed ortholog is 100%.

Group of orthologs #2143. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.troglodytes:65

Q5KAA3              	100.00%		H2PZV6              	100.00%
Bootstrap support for Q5KAA3 as seed ortholog is 100%.
Bootstrap support for H2PZV6 as seed ortholog is 100%.

Group of orthologs #2144. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.troglodytes:65

Q5KMV9              	100.00%		H2QEU1              	100.00%
Bootstrap support for Q5KMV9 as seed ortholog is 100%.
Bootstrap support for H2QEU1 as seed ortholog is 100%.

Group of orthologs #2145. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.troglodytes:65

Q5KHD2              	100.00%		H2QVU9              	100.00%
Bootstrap support for Q5KHD2 as seed ortholog is 100%.
Bootstrap support for H2QVU9 as seed ortholog is 100%.

Group of orthologs #2146. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KJ78              	100.00%		H2QEX3              	100.00%
Q5KE36              	15.98%		H2R1U9              	19.96%
Q5KE37              	15.53%		H2Q7X4              	11.15%
Bootstrap support for Q5KJ78 as seed ortholog is 100%.
Bootstrap support for H2QEX3 as seed ortholog is 100%.

Group of orthologs #2147. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.troglodytes:64

Q5KGK8              	100.00%		G2HEE7              	100.00%
Bootstrap support for Q5KGK8 as seed ortholog is 75%.
Bootstrap support for G2HEE7 as seed ortholog is 100%.

Group of orthologs #2148. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KIF0              	100.00%		G2HG04              	100.00%
Bootstrap support for Q5KIF0 as seed ortholog is 100%.
Bootstrap support for G2HG04 as seed ortholog is 100%.

Group of orthologs #2149. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KAI0              	100.00%		H2QBJ8              	100.00%
Bootstrap support for Q5KAI0 as seed ortholog is 100%.
Bootstrap support for H2QBJ8 as seed ortholog is 100%.

Group of orthologs #2150. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KBS6              	100.00%		H2QK11              	100.00%
Bootstrap support for Q5KBS6 as seed ortholog is 100%.
Bootstrap support for H2QK11 as seed ortholog is 100%.

Group of orthologs #2151. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:15 P.troglodytes:64

Q5KMQ0              	100.00%		H2QNE7              	100.00%
Bootstrap support for Q5KMQ0 as seed ortholog is 70%.
Alternative seed ortholog is Q5KB31 (15 bits away from this cluster)
Bootstrap support for H2QNE7 as seed ortholog is 100%.

Group of orthologs #2152. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KLG2              	100.00%		H2QQR0              	100.00%
Bootstrap support for Q5KLG2 as seed ortholog is 100%.
Bootstrap support for H2QQR0 as seed ortholog is 100%.

Group of orthologs #2153. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KIM9              	100.00%		H2QZ60              	100.00%
Bootstrap support for Q5KIM9 as seed ortholog is 100%.
Bootstrap support for H2QZ60 as seed ortholog is 100%.

Group of orthologs #2154. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.troglodytes:64

Q5KMP9              	100.00%		H2RA06              	100.00%
Bootstrap support for Q5KMP9 as seed ortholog is 100%.
Bootstrap support for H2RA06 as seed ortholog is 100%.

Group of orthologs #2155. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.troglodytes:21

P0CR96              	100.00%		H2Q8D8              	100.00%
Bootstrap support for P0CR96 as seed ortholog is 100%.
Bootstrap support for H2Q8D8 as seed ortholog is 93%.

Group of orthologs #2156. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.troglodytes:63

Q5KHW4              	100.00%		H2Q1W6              	100.00%
Bootstrap support for Q5KHW4 as seed ortholog is 100%.
Bootstrap support for H2Q1W6 as seed ortholog is 100%.

Group of orthologs #2157. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.troglodytes:63

Q5KM63              	100.00%		H2RBJ9              	100.00%
Bootstrap support for Q5KM63 as seed ortholog is 65%.
Alternative seed ortholog is Q5KNJ4 (16 bits away from this cluster)
Bootstrap support for H2RBJ9 as seed ortholog is 100%.

Group of orthologs #2158. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.troglodytes:62

Q5KBR3              	100.00%		H2PZ69              	100.00%
                    	       		H2RFQ4              	32.85%
Bootstrap support for Q5KBR3 as seed ortholog is 100%.
Bootstrap support for H2PZ69 as seed ortholog is 100%.

Group of orthologs #2159. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.troglodytes:62

Q5KHX8              	100.00%		H2R632              	100.00%
Bootstrap support for Q5KHX8 as seed ortholog is 100%.
Bootstrap support for H2R632 as seed ortholog is 100%.

Group of orthologs #2160. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:61

Q5KGP9              	100.00%		H2QNJ4              	100.00%
                    	       		H2R7Z9              	62.21%
                    	       		H2RE56              	39.41%
                    	       		H2QC35              	33.06%
                    	       		H2R1C7              	31.76%
Bootstrap support for Q5KGP9 as seed ortholog is 100%.
Bootstrap support for H2QNJ4 as seed ortholog is 100%.

Group of orthologs #2161. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:13

Q5KLA4              	100.00%		H2QRF6              	100.00%
                    	       		H2QX91              	51.74%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for H2QRF6 as seed ortholog is 70%.
Alternative seed ortholog is H2QTP6 (13 bits away from this cluster)

Group of orthologs #2162. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:61

P0CS58              	100.00%		H2QL13              	100.00%
Bootstrap support for P0CS58 as seed ortholog is 100%.
Bootstrap support for H2QL13 as seed ortholog is 100%.

Group of orthologs #2163. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:61

Q5K8J3              	100.00%		H2QJR0              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for H2QJR0 as seed ortholog is 100%.

Group of orthologs #2164. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:61

Q5KJL1              	100.00%		H2QBQ4              	100.00%
Bootstrap support for Q5KJL1 as seed ortholog is 100%.
Bootstrap support for H2QBQ4 as seed ortholog is 100%.

Group of orthologs #2165. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:61

Q5K7R2              	100.00%		H2QVI3              	100.00%
Bootstrap support for Q5K7R2 as seed ortholog is 100%.
Bootstrap support for H2QVI3 as seed ortholog is 100%.

Group of orthologs #2166. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.troglodytes:61

Q5KCB1              	100.00%		H2R5I4              	100.00%
Bootstrap support for Q5KCB1 as seed ortholog is 100%.
Bootstrap support for H2R5I4 as seed ortholog is 100%.

Group of orthologs #2167. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.troglodytes:60

P0CM36              	100.00%		H2QTH2              	100.00%
Bootstrap support for P0CM36 as seed ortholog is 100%.
Bootstrap support for H2QTH2 as seed ortholog is 100%.

Group of orthologs #2168. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.troglodytes:60

Q5KJX5              	100.00%		H2QJI8              	100.00%
Bootstrap support for Q5KJX5 as seed ortholog is 100%.
Bootstrap support for H2QJI8 as seed ortholog is 100%.

Group of orthologs #2169. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.troglodytes:60

Q5K8H0              	100.00%		H2R385              	100.00%
Bootstrap support for Q5K8H0 as seed ortholog is 100%.
Bootstrap support for H2R385 as seed ortholog is 100%.

Group of orthologs #2170. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KAC4              	100.00%		H2Q1W2              	100.00%
Q5K7U4              	70.09%		
Q5K9W4              	66.20%		
Q5KNV1              	32.30%		
Q5KC63              	24.83%		
Q5KL95              	24.33%		
Q5KEB6              	23.73%		
Q5KL96              	23.63%		
Q5KL87              	20.94%		
Q5KAY0              	18.74%		
Q5KAJ8              	18.34%		
Q5K858              	16.55%		
Q5KEV7              	14.46%		
Q5KGZ0              	14.06%		
Q5KKZ4              	13.16%		
Q5KHE0              	9.87%		
Q5KNB5              	5.48%		
Bootstrap support for Q5KAC4 as seed ortholog is 100%.
Bootstrap support for H2Q1W2 as seed ortholog is 100%.

Group of orthologs #2171. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5K930              	100.00%		H2Q6Z4              	100.00%
                    	       		H2QVV5              	5.93%
Bootstrap support for Q5K930 as seed ortholog is 100%.
Bootstrap support for H2Q6Z4 as seed ortholog is 100%.

Group of orthologs #2172. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KBV8              	100.00%		H2QF00              	100.00%
                    	       		H2QXD0              	36.84%
Bootstrap support for Q5KBV8 as seed ortholog is 100%.
Bootstrap support for H2QF00 as seed ortholog is 100%.

Group of orthologs #2173. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5K9N4              	100.00%		H2Q233              	100.00%
Bootstrap support for Q5K9N4 as seed ortholog is 100%.
Bootstrap support for H2Q233 as seed ortholog is 100%.

Group of orthologs #2174. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KAN1              	100.00%		H2Q797              	100.00%
Bootstrap support for Q5KAN1 as seed ortholog is 100%.
Bootstrap support for H2Q797 as seed ortholog is 100%.

Group of orthologs #2175. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.troglodytes:59

Q5KDP7              	100.00%		H2QE34              	100.00%
Bootstrap support for Q5KDP7 as seed ortholog is 51%.
Alternative seed ortholog is Q5KJ05 (16 bits away from this cluster)
Bootstrap support for H2QE34 as seed ortholog is 100%.

Group of orthologs #2176. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5K8M3              	100.00%		H2QKL5              	100.00%
Bootstrap support for Q5K8M3 as seed ortholog is 100%.
Bootstrap support for H2QKL5 as seed ortholog is 100%.

Group of orthologs #2177. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5K6Z4              	100.00%		H2QQG6              	100.00%
Bootstrap support for Q5K6Z4 as seed ortholog is 100%.
Bootstrap support for H2QQG6 as seed ortholog is 100%.

Group of orthologs #2178. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

P0CS72              	100.00%		H2QWL0              	100.00%
Bootstrap support for P0CS72 as seed ortholog is 100%.
Bootstrap support for H2QWL0 as seed ortholog is 100%.

Group of orthologs #2179. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5K9N5              	100.00%		H2QU84              	100.00%
Bootstrap support for Q5K9N5 as seed ortholog is 100%.
Bootstrap support for H2QU84 as seed ortholog is 100%.

Group of orthologs #2180. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KD81              	100.00%		H2R369              	100.00%
Bootstrap support for Q5KD81 as seed ortholog is 100%.
Bootstrap support for H2R369 as seed ortholog is 100%.

Group of orthologs #2181. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KQ19              	100.00%		H2QWK9              	100.00%
Bootstrap support for Q5KQ19 as seed ortholog is 100%.
Bootstrap support for H2QWK9 as seed ortholog is 100%.

Group of orthologs #2182. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KP93              	100.00%		H2QXZ9              	100.00%
Bootstrap support for Q5KP93 as seed ortholog is 100%.
Bootstrap support for H2QXZ9 as seed ortholog is 100%.

Group of orthologs #2183. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.troglodytes:59

Q5KL84              	100.00%		H2R6M2              	100.00%
Bootstrap support for Q5KL84 as seed ortholog is 100%.
Bootstrap support for H2R6M2 as seed ortholog is 100%.

Group of orthologs #2184. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.troglodytes:58

Q5KJT0              	100.00%		H2Q709              	100.00%
                    	       		H2REJ4              	100.00%
                    	       		H2QB05              	33.71%
Bootstrap support for Q5KJT0 as seed ortholog is 100%.
Bootstrap support for H2Q709 as seed ortholog is 100%.
Bootstrap support for H2REJ4 as seed ortholog is 100%.

Group of orthologs #2185. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.troglodytes:1

Q5KIQ8              	100.00%		H2R4D5              	100.00%
                    	       		H2QZZ3              	41.33%
                    	       		H2QH52              	10.62%
Bootstrap support for Q5KIQ8 as seed ortholog is 100%.
Bootstrap support for H2R4D5 as seed ortholog is 63%.
Alternative seed ortholog is H2QDV5 (1 bits away from this cluster)

Group of orthologs #2186. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.troglodytes:58

P0CM00              	100.00%		H2R554              	100.00%
Bootstrap support for P0CM00 as seed ortholog is 100%.
Bootstrap support for H2R554 as seed ortholog is 100%.

Group of orthologs #2187. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.troglodytes:58

Q5KAA4              	100.00%		H2RDG8              	100.00%
Bootstrap support for Q5KAA4 as seed ortholog is 100%.
Bootstrap support for H2RDG8 as seed ortholog is 100%.

Group of orthologs #2188. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:57

Q5KC66              	100.00%		H2Q074              	100.00%
                    	       		H2RF18              	25.56%
Bootstrap support for Q5KC66 as seed ortholog is 100%.
Bootstrap support for H2Q074 as seed ortholog is 100%.

Group of orthologs #2189. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:57

Q5KNZ7              	100.00%		H2Q0X3              	100.00%
Bootstrap support for Q5KNZ7 as seed ortholog is 100%.
Bootstrap support for H2Q0X3 as seed ortholog is 100%.

Group of orthologs #2190. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:57

Q5KC93              	100.00%		H2QRN0              	100.00%
Bootstrap support for Q5KC93 as seed ortholog is 100%.
Bootstrap support for H2QRN0 as seed ortholog is 100%.

Group of orthologs #2191. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:57

Q5KG38              	100.00%		H2QRV7              	100.00%
Bootstrap support for Q5KG38 as seed ortholog is 100%.
Bootstrap support for H2QRV7 as seed ortholog is 100%.

Group of orthologs #2192. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.troglodytes:57

Q5KNH1              	100.00%		H2RI34              	100.00%
Bootstrap support for Q5KNH1 as seed ortholog is 100%.
Bootstrap support for H2RI34 as seed ortholog is 100%.

Group of orthologs #2193. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5K7I1              	100.00%		H2Q146              	100.00%
                    	       		H2Q8P0              	30.06%
Bootstrap support for Q5K7I1 as seed ortholog is 100%.
Bootstrap support for H2Q146 as seed ortholog is 100%.

Group of orthologs #2194. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KNH9              	100.00%		H2Q3R3              	100.00%
                    	       		H2RHS9              	14.33%
Bootstrap support for Q5KNH9 as seed ortholog is 100%.
Bootstrap support for H2Q3R3 as seed ortholog is 100%.

Group of orthologs #2195. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

P0CR94              	100.00%		H2QYW7              	100.00%
                    	       		H2Q4S3              	16.08%
Bootstrap support for P0CR94 as seed ortholog is 100%.
Bootstrap support for H2QYW7 as seed ortholog is 100%.

Group of orthologs #2196. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KJZ0              	100.00%		H2RBW0              	100.00%
                    	       		H2QLF5              	13.25%
Bootstrap support for Q5KJZ0 as seed ortholog is 100%.
Bootstrap support for H2RBW0 as seed ortholog is 100%.

Group of orthologs #2197. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

P0CM84              	100.00%		H2Q8J3              	100.00%
Bootstrap support for P0CM84 as seed ortholog is 100%.
Bootstrap support for H2Q8J3 as seed ortholog is 100%.

Group of orthologs #2198. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5K8Q1              	100.00%		H2QIE1              	100.00%
Bootstrap support for Q5K8Q1 as seed ortholog is 100%.
Bootstrap support for H2QIE1 as seed ortholog is 100%.

Group of orthologs #2199. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KCJ7              	100.00%		H2QFY9              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for H2QFY9 as seed ortholog is 100%.

Group of orthologs #2200. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KCZ5              	100.00%		H2QI77              	100.00%
Bootstrap support for Q5KCZ5 as seed ortholog is 100%.
Bootstrap support for H2QI77 as seed ortholog is 100%.

Group of orthologs #2201. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KGX3              	100.00%		H2QMK7              	100.00%
Bootstrap support for Q5KGX3 as seed ortholog is 100%.
Bootstrap support for H2QMK7 as seed ortholog is 100%.

Group of orthologs #2202. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KMK7              	100.00%		H2R1V9              	100.00%
Bootstrap support for Q5KMK7 as seed ortholog is 100%.
Bootstrap support for H2R1V9 as seed ortholog is 100%.

Group of orthologs #2203. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.troglodytes:56

Q5KJY5              	100.00%		H2RFX6              	100.00%
Bootstrap support for Q5KJY5 as seed ortholog is 100%.
Bootstrap support for H2RFX6 as seed ortholog is 100%.

Group of orthologs #2204. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.troglodytes:55

Q5K823              	100.00%		H2QDU2              	100.00%
Bootstrap support for Q5K823 as seed ortholog is 100%.
Bootstrap support for H2QDU2 as seed ortholog is 100%.

Group of orthologs #2205. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.troglodytes:55

Q5KFH6              	100.00%		H2QWE9              	100.00%
Bootstrap support for Q5KFH6 as seed ortholog is 100%.
Bootstrap support for H2QWE9 as seed ortholog is 100%.

Group of orthologs #2206. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5K8Y3              	100.00%		H2Q2Q4              	100.00%
                    	       		H2R9N6              	10.58%
                    	       		H2QJC6              	10.46%
                    	       		H2QUK7              	9.86%
                    	       		H2Q673              	8.41%
                    	       		H2R723              	6.01%
                    	       		H2QMF0              	5.89%
Bootstrap support for Q5K8Y3 as seed ortholog is 100%.
Bootstrap support for H2Q2Q4 as seed ortholog is 100%.

Group of orthologs #2207. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5K7Z6              	100.00%		H2QEA6              	100.00%
                    	       		H2R283              	50.94%
                    	       		H2RAG3              	13.93%
                    	       		H2QIQ3              	11.17%
                    	       		H2Q0W8              	11.04%
Bootstrap support for Q5K7Z6 as seed ortholog is 100%.
Bootstrap support for H2QEA6 as seed ortholog is 100%.

Group of orthologs #2208. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5KB75              	100.00%		H2QYX6              	100.00%
                    	       		H2Q3X3              	54.66%
                    	       		H2RBW2              	45.17%
                    	       		G2HI10              	39.66%
Bootstrap support for Q5KB75 as seed ortholog is 100%.
Bootstrap support for H2QYX6 as seed ortholog is 100%.

Group of orthologs #2209. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:6

Q5K8E1              	100.00%		H2QLF8              	100.00%
                    	       		H2RA80              	26.59%
                    	       		H2QCQ4              	20.89%
Bootstrap support for Q5K8E1 as seed ortholog is 100%.
Bootstrap support for H2QLF8 as seed ortholog is 39%.
Alternative seed ortholog is H2RBX2 (6 bits away from this cluster)

Group of orthologs #2210. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5KL61              	100.00%		H2QK26              	100.00%
                    	       		H2RGP2              	50.21%
Bootstrap support for Q5KL61 as seed ortholog is 100%.
Bootstrap support for H2QK26 as seed ortholog is 100%.

Group of orthologs #2211. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:1

Q5KKK4              	100.00%		H2QZ17              	100.00%
                    	       		H2QQ58              	15.90%
Bootstrap support for Q5KKK4 as seed ortholog is 100%.
Bootstrap support for H2QZ17 as seed ortholog is 66%.
Alternative seed ortholog is H2Q139 (1 bits away from this cluster)

Group of orthologs #2212. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5KK75              	100.00%		H2Q8W7              	100.00%
Bootstrap support for Q5KK75 as seed ortholog is 100%.
Bootstrap support for H2Q8W7 as seed ortholog is 100%.

Group of orthologs #2213. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5KFY1              	100.00%		H2QMM6              	100.00%
Bootstrap support for Q5KFY1 as seed ortholog is 100%.
Bootstrap support for H2QMM6 as seed ortholog is 100%.

Group of orthologs #2214. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5KEH4              	100.00%		H2QV53              	100.00%
Bootstrap support for Q5KEH4 as seed ortholog is 100%.
Bootstrap support for H2QV53 as seed ortholog is 100%.

Group of orthologs #2215. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:2 P.troglodytes:54

Q5KKZ1              	100.00%		H2QTG2              	100.00%
Bootstrap support for Q5KKZ1 as seed ortholog is 52%.
Alternative seed ortholog is Q5KGC6 (2 bits away from this cluster)
Bootstrap support for H2QTG2 as seed ortholog is 100%.

Group of orthologs #2216. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.troglodytes:54

Q5KK23              	100.00%		H2R0L7              	100.00%
Bootstrap support for Q5KK23 as seed ortholog is 100%.
Bootstrap support for H2R0L7 as seed ortholog is 100%.

Group of orthologs #2217. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:53

Q5KAW0              	100.00%		H2QJ13              	100.00%
                    	       		A2T6X6              	8.41%
                    	       		H2Q636              	6.97%
                    	       		H2QJ14              	6.97%
                    	       		H2REI2              	6.73%
                    	       		H2RAB1              	6.37%
                    	       		H2QUB3              	5.17%
Bootstrap support for Q5KAW0 as seed ortholog is 100%.
Bootstrap support for H2QJ13 as seed ortholog is 100%.

Group of orthologs #2218. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:53

P0CM08              	100.00%		H2QF42              	100.00%
                    	       		H2QX19              	42.63%
Bootstrap support for P0CM08 as seed ortholog is 100%.
Bootstrap support for H2QF42 as seed ortholog is 100%.

Group of orthologs #2219. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:53

Q5KLF0              	100.00%		H2QH64              	100.00%
Bootstrap support for Q5KLF0 as seed ortholog is 100%.
Bootstrap support for H2QH64 as seed ortholog is 100%.

Group of orthologs #2220. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:53

Q5KC20              	100.00%		H2QX95              	100.00%
Bootstrap support for Q5KC20 as seed ortholog is 100%.
Bootstrap support for H2QX95 as seed ortholog is 100%.

Group of orthologs #2221. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.troglodytes:53

Q5KNU7              	100.00%		Q3BCR8              	100.00%
Bootstrap support for Q5KNU7 as seed ortholog is 100%.
Bootstrap support for Q3BCR8 as seed ortholog is 100%.

Group of orthologs #2222. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.troglodytes:52

Q5K8C4              	100.00%		H2Q957              	100.00%
Bootstrap support for Q5K8C4 as seed ortholog is 100%.
Bootstrap support for H2Q957 as seed ortholog is 100%.

Group of orthologs #2223. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.troglodytes:52

Q5KL26              	100.00%		H2PZN4              	100.00%
Bootstrap support for Q5KL26 as seed ortholog is 100%.
Bootstrap support for H2PZN4 as seed ortholog is 100%.

Group of orthologs #2224. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.troglodytes:52

Q5KPI6              	100.00%		H2QC03              	100.00%
Bootstrap support for Q5KPI6 as seed ortholog is 100%.
Bootstrap support for H2QC03 as seed ortholog is 100%.

Group of orthologs #2225. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.troglodytes:52

Q5KKA0              	100.00%		H2QPD8              	100.00%
Bootstrap support for Q5KKA0 as seed ortholog is 100%.
Bootstrap support for H2QPD8 as seed ortholog is 100%.

Group of orthologs #2226. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 P.troglodytes:51

P0CO72              	100.00%		H2Q7J9              	100.00%
Bootstrap support for P0CO72 as seed ortholog is 100%.
Bootstrap support for H2Q7J9 as seed ortholog is 100%.

Group of orthologs #2227. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 P.troglodytes:51

Q5KE80              	100.00%		H2QYJ4              	100.00%
Bootstrap support for Q5KE80 as seed ortholog is 100%.
Bootstrap support for H2QYJ4 as seed ortholog is 100%.

Group of orthologs #2228. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.troglodytes:50

Q5KEL7              	100.00%		H2Q7S2              	100.00%
                    	       		H2Q4Q2              	49.75%
                    	       		H2QN54              	10.94%
Bootstrap support for Q5KEL7 as seed ortholog is 100%.
Bootstrap support for H2Q7S2 as seed ortholog is 100%.

Group of orthologs #2229. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.troglodytes:50

Q5K9B7              	100.00%		H2Q2R3              	100.00%
Bootstrap support for Q5K9B7 as seed ortholog is 100%.
Bootstrap support for H2Q2R3 as seed ortholog is 100%.

Group of orthologs #2230. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.troglodytes:50

Q5K8B9              	100.00%		H2QQK0              	100.00%
Bootstrap support for Q5K8B9 as seed ortholog is 100%.
Bootstrap support for H2QQK0 as seed ortholog is 100%.

Group of orthologs #2231. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.troglodytes:50

Q5KLZ5              	100.00%		H2QX50              	100.00%
Bootstrap support for Q5KLZ5 as seed ortholog is 100%.
Bootstrap support for H2QX50 as seed ortholog is 100%.

Group of orthologs #2232. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.troglodytes:49

Q5KP28              	100.00%		P23583              	100.00%
                    	       		H2QHG6              	24.79%
                    	       		H2PYR4              	8.98%
Bootstrap support for Q5KP28 as seed ortholog is 100%.
Bootstrap support for P23583 as seed ortholog is 100%.

Group of orthologs #2233. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.troglodytes:49

Q5K8C9              	100.00%		H2QC11              	100.00%
Bootstrap support for Q5K8C9 as seed ortholog is 100%.
Bootstrap support for H2QC11 as seed ortholog is 100%.

Group of orthologs #2234. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.troglodytes:49

Q5KI09              	100.00%		H2Q585              	100.00%
Bootstrap support for Q5KI09 as seed ortholog is 100%.
Bootstrap support for H2Q585 as seed ortholog is 100%.

Group of orthologs #2235. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.troglodytes:49

Q5KJV4              	100.00%		H2Q423              	100.00%
Bootstrap support for Q5KJV4 as seed ortholog is 100%.
Bootstrap support for H2Q423 as seed ortholog is 100%.

Group of orthologs #2236. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:3 P.troglodytes:49

Q5K9Y9              	100.00%		H2QQM8              	100.00%
Bootstrap support for Q5K9Y9 as seed ortholog is 56%.
Alternative seed ortholog is Q5KBW4 (3 bits away from this cluster)
Bootstrap support for H2QQM8 as seed ortholog is 100%.

Group of orthologs #2237. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.troglodytes:3

Q5KDM4              	100.00%		H2QUB5              	100.00%
                    	       		H2REY9              	40.20%
                    	       		H2QDB8              	9.97%
                    	       		A2T756              	9.29%
                    	       		H2R111              	8.96%
                    	       		H2QDC1              	8.73%
                    	       		H2QUB6              	7.73%
                    	       		A2T748              	6.61%
                    	       		A2T6Z0              	6.49%
                    	       		H2PZD7              	6.49%
                    	       		H2QDC2              	5.38%
Bootstrap support for Q5KDM4 as seed ortholog is 100%.
Bootstrap support for H2QUB5 as seed ortholog is 59%.
Alternative seed ortholog is H2Q2A0 (3 bits away from this cluster)

Group of orthologs #2238. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.troglodytes:48

Q5K779              	100.00%		H2QXK5              	100.00%
Bootstrap support for Q5K779 as seed ortholog is 100%.
Bootstrap support for H2QXK5 as seed ortholog is 100%.

Group of orthologs #2239. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.troglodytes:47

Q5KML0              	100.00%		H2R3Z8              	100.00%
                    	       		H2QSB0              	25.12%
Bootstrap support for Q5KML0 as seed ortholog is 100%.
Bootstrap support for H2R3Z8 as seed ortholog is 100%.

Group of orthologs #2240. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.troglodytes:47

Q5KNV5              	100.00%		H2Q3R6              	100.00%
Bootstrap support for Q5KNV5 as seed ortholog is 100%.
Bootstrap support for H2Q3R6 as seed ortholog is 100%.

Group of orthologs #2241. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.troglodytes:47

Q5KLP6              	100.00%		H2R4D0              	100.00%
Bootstrap support for Q5KLP6 as seed ortholog is 100%.
Bootstrap support for H2R4D0 as seed ortholog is 100%.

Group of orthologs #2242. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 P.troglodytes:46

Q5KIT7              	100.00%		H2RCH0              	100.00%
                    	       		H2QFR8              	38.54%
                    	       		H2Q740              	27.02%
                    	       		H2QHZ0              	22.52%
                    	       		H2QGE2              	18.68%
                    	       		H2Q0T7              	16.03%
                    	       		H2QNT6              	16.03%
                    	       		Q7JK26              	13.64%
                    	       		H2RAI2              	12.98%
                    	       		Q9N295              	12.45%
                    	       		H2R7E7              	11.39%
                    	       		H2REP0              	10.86%
Bootstrap support for Q5KIT7 as seed ortholog is 100%.
Bootstrap support for H2RCH0 as seed ortholog is 100%.

Group of orthologs #2243. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 P.troglodytes:46

Q5KCT6              	100.00%		H2R7A0              	100.00%
Bootstrap support for Q5KCT6 as seed ortholog is 100%.
Bootstrap support for H2R7A0 as seed ortholog is 100%.

Group of orthologs #2244. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.troglodytes:45

Q5KJW6              	100.00%		H2PYN4              	100.00%
Bootstrap support for Q5KJW6 as seed ortholog is 100%.
Bootstrap support for H2PYN4 as seed ortholog is 100%.

Group of orthologs #2245. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.troglodytes:45

Q5KNQ6              	100.00%		H2QHI9              	100.00%
Bootstrap support for Q5KNQ6 as seed ortholog is 100%.
Bootstrap support for H2QHI9 as seed ortholog is 100%.

Group of orthologs #2246. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.troglodytes:45

Q5KPW0              	100.00%		Q0MQ99              	100.00%
Bootstrap support for Q5KPW0 as seed ortholog is 100%.
Bootstrap support for Q0MQ99 as seed ortholog is 100%.

Group of orthologs #2247. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:44

Q5KP82              	100.00%		H2QBT8              	100.00%
                    	       		H2R472              	47.07%
Bootstrap support for Q5KP82 as seed ortholog is 100%.
Bootstrap support for H2QBT8 as seed ortholog is 100%.

Group of orthologs #2248. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:44

Q5KI39              	100.00%		H2Q7C9              	100.00%
Bootstrap support for Q5KI39 as seed ortholog is 100%.
Bootstrap support for H2Q7C9 as seed ortholog is 100%.

Group of orthologs #2249. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:44

Q5KH53              	100.00%		H2QRU4              	100.00%
Bootstrap support for Q5KH53 as seed ortholog is 100%.
Bootstrap support for H2QRU4 as seed ortholog is 100%.

Group of orthologs #2250. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:44

P0CQ32              	100.00%		H2RA56              	100.00%
Bootstrap support for P0CQ32 as seed ortholog is 100%.
Bootstrap support for H2RA56 as seed ortholog is 100%.

Group of orthologs #2251. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:44

Q5KAZ1              	100.00%		H2RFT7              	100.00%
Bootstrap support for Q5KAZ1 as seed ortholog is 100%.
Bootstrap support for H2RFT7 as seed ortholog is 100%.

Group of orthologs #2252. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.troglodytes:44

Q5KF36              	100.00%		Q5U7I5              	100.00%
Bootstrap support for Q5KF36 as seed ortholog is 100%.
Bootstrap support for Q5U7I5 as seed ortholog is 100%.

Group of orthologs #2253. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.troglodytes:43

Q5K8B3              	100.00%		H2QKE4              	100.00%
                    	       		H2QW80              	21.85%
                    	       		H2QTP1              	21.69%
                    	       		H2QA17              	19.69%
                    	       		H2QW83              	18.46%
Bootstrap support for Q5K8B3 as seed ortholog is 100%.
Bootstrap support for H2QKE4 as seed ortholog is 100%.

Group of orthologs #2254. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.troglodytes:43

Q5KPI7              	100.00%		H2QS94              	100.00%
Bootstrap support for Q5KPI7 as seed ortholog is 100%.
Bootstrap support for H2QS94 as seed ortholog is 100%.

Group of orthologs #2255. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.troglodytes:42

Q5K946              	100.00%		H2QK52              	100.00%
                    	       		H2QBN5              	40.18%
                    	       		O46577              	40.18%
Bootstrap support for Q5K946 as seed ortholog is 100%.
Bootstrap support for H2QK52 as seed ortholog is 100%.

Group of orthologs #2256. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.troglodytes:42

Q5KHR4              	100.00%		H2QIP4              	100.00%
Bootstrap support for Q5KHR4 as seed ortholog is 100%.
Bootstrap support for H2QIP4 as seed ortholog is 100%.

Group of orthologs #2257. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.troglodytes:42

P0CM70              	100.00%		H2QZP8              	100.00%
Bootstrap support for P0CM70 as seed ortholog is 100%.
Bootstrap support for H2QZP8 as seed ortholog is 100%.

Group of orthologs #2258. Best score 40 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.troglodytes:40

Q5KH42              	100.00%		H2QFU9              	100.00%
Bootstrap support for Q5KH42 as seed ortholog is 100%.
Bootstrap support for H2QFU9 as seed ortholog is 100%.