###################################
1396 groups of orthologs
1530 in-paralogs from C.neoformans
2111 in-paralogs from P.pacificus
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1894 bits
Score difference with first non-orthologous sequence - C.neoformans:1894 P.pacificus:1894

Q5KNM2              	100.00%		H3E620              	100.00%
Bootstrap support for Q5KNM2 as seed ortholog is 100%.
Bootstrap support for H3E620 as seed ortholog is 100%.

Group of orthologs #2. Best score 1767 bits
Score difference with first non-orthologous sequence - C.neoformans:1767 P.pacificus:1767

Q5KA29              	100.00%		H3EZS4              	100.00%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for H3EZS4 as seed ortholog is 100%.

Group of orthologs #3. Best score 1729 bits
Score difference with first non-orthologous sequence - C.neoformans:1729 P.pacificus:1729

Q5KPW2              	100.00%		H3FSY2              	100.00%
Bootstrap support for Q5KPW2 as seed ortholog is 100%.
Bootstrap support for H3FSY2 as seed ortholog is 100%.

Group of orthologs #4. Best score 1472 bits
Score difference with first non-orthologous sequence - C.neoformans:1472 P.pacificus:1472

Q5KGG3              	100.00%		H3G223              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for H3G223 as seed ortholog is 100%.

Group of orthologs #5. Best score 1209 bits
Score difference with first non-orthologous sequence - C.neoformans:1209 P.pacificus:1209

Q5KBW5              	100.00%		H3DYE1              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for H3DYE1 as seed ortholog is 100%.

Group of orthologs #6. Best score 1190 bits
Score difference with first non-orthologous sequence - C.neoformans:738 P.pacificus:959

Q5KA71              	100.00%		H3EEN1              	100.00%
                    	       		H3F9W2              	57.92%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for H3EEN1 as seed ortholog is 100%.

Group of orthologs #7. Best score 1184 bits
Score difference with first non-orthologous sequence - C.neoformans:1184 P.pacificus:1184

Q5KFV9              	100.00%		H3FHF9              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for H3FHF9 as seed ortholog is 100%.

Group of orthologs #8. Best score 1105 bits
Score difference with first non-orthologous sequence - C.neoformans:1105 P.pacificus:1105

Q5KFC9              	100.00%		H3E7I6              	100.00%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for H3E7I6 as seed ortholog is 100%.

Group of orthologs #9. Best score 1090 bits
Score difference with first non-orthologous sequence - C.neoformans:690 P.pacificus:258

Q5KHJ9              	100.00%		H3FAW0              	100.00%
                    	       		H3EW86              	20.89%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for H3FAW0 as seed ortholog is 100%.

Group of orthologs #10. Best score 1073 bits
Score difference with first non-orthologous sequence - C.neoformans:291 P.pacificus:1073

Q5KET5              	100.00%		H3G1A1              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 99%.
Bootstrap support for H3G1A1 as seed ortholog is 100%.

Group of orthologs #11. Best score 1054 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.pacificus:842

Q5KIK6              	100.00%		H3EEH1              	100.00%
Bootstrap support for Q5KIK6 as seed ortholog is 100%.
Bootstrap support for H3EEH1 as seed ortholog is 100%.

Group of orthologs #12. Best score 1043 bits
Score difference with first non-orthologous sequence - C.neoformans:1043 P.pacificus:1043

Q5KGK1              	100.00%		H3EEH2              	100.00%
                    	       		H3FRI4              	16.30%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for H3EEH2 as seed ortholog is 100%.

Group of orthologs #13. Best score 1002 bits
Score difference with first non-orthologous sequence - C.neoformans:730 P.pacificus:897

Q5KPM2              	100.00%		H3DXV3              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for H3DXV3 as seed ortholog is 100%.

Group of orthologs #14. Best score 983 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.pacificus:165

Q5KKP4              	100.00%		H3E674              	100.00%
Q5KKM4              	81.75%		H3FYW1              	70.63%
Bootstrap support for Q5KKP4 as seed ortholog is 100%.
Bootstrap support for H3E674 as seed ortholog is 100%.

Group of orthologs #15. Best score 966 bits
Score difference with first non-orthologous sequence - C.neoformans:966 P.pacificus:966

Q5KFT2              	100.00%		H3G2T6              	100.00%
Bootstrap support for Q5KFT2 as seed ortholog is 100%.
Bootstrap support for H3G2T6 as seed ortholog is 100%.

Group of orthologs #16. Best score 930 bits
Score difference with first non-orthologous sequence - C.neoformans:930 P.pacificus:930

Q5KL19              	100.00%		H3DZM9              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for H3DZM9 as seed ortholog is 100%.

Group of orthologs #17. Best score 924 bits
Score difference with first non-orthologous sequence - C.neoformans:531 P.pacificus:291

Q5K7R6              	100.00%		H3F7D2              	100.00%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for H3F7D2 as seed ortholog is 100%.

Group of orthologs #18. Best score 913 bits
Score difference with first non-orthologous sequence - C.neoformans:913 P.pacificus:913

Q5KKH8              	100.00%		H3E5K6              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for H3E5K6 as seed ortholog is 100%.

Group of orthologs #19. Best score 906 bits
Score difference with first non-orthologous sequence - C.neoformans:906 P.pacificus:906

Q5KE57              	100.00%		H3EIF1              	100.00%
Bootstrap support for Q5KE57 as seed ortholog is 100%.
Bootstrap support for H3EIF1 as seed ortholog is 100%.

Group of orthologs #20. Best score 885 bits
Score difference with first non-orthologous sequence - C.neoformans:885 P.pacificus:185

Q5KJI1              	100.00%		H3F269              	100.00%
                    	       		H3E7L3              	23.87%
                    	       		H3G0V4              	5.27%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for H3F269 as seed ortholog is 98%.

Group of orthologs #21. Best score 864 bits
Score difference with first non-orthologous sequence - C.neoformans:864 P.pacificus:864

Q5K9A5              	100.00%		H3EB01              	100.00%
                    	       		H3FQQ1              	100.00%
Bootstrap support for Q5K9A5 as seed ortholog is 100%.
Bootstrap support for H3EB01 as seed ortholog is 100%.
Bootstrap support for H3FQQ1 as seed ortholog is 100%.

Group of orthologs #22. Best score 861 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.pacificus:351

Q5KJN9              	100.00%		H3FPT1              	100.00%
                    	       		H3EE46              	60.03%
                    	       		H3FSJ7              	39.66%
                    	       		H3FEV1              	31.27%
Bootstrap support for Q5KJN9 as seed ortholog is 98%.
Bootstrap support for H3FPT1 as seed ortholog is 100%.

Group of orthologs #23. Best score 854 bits
Score difference with first non-orthologous sequence - C.neoformans:854 P.pacificus:528

Q5KMH0              	100.00%		H3EL88              	100.00%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for H3EL88 as seed ortholog is 100%.

Group of orthologs #24. Best score 852 bits
Score difference with first non-orthologous sequence - C.neoformans:852 P.pacificus:852

Q5KPX3              	100.00%		H3EPF1              	100.00%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for H3EPF1 as seed ortholog is 100%.

Group of orthologs #25. Best score 842 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.pacificus:146

Q5K6Z6              	100.00%		H3F5P0              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 100%.
Bootstrap support for H3F5P0 as seed ortholog is 99%.

Group of orthologs #26. Best score 842 bits
Score difference with first non-orthologous sequence - C.neoformans:713 P.pacificus:842

Q5KMF6              	100.00%		H3G233              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for H3G233 as seed ortholog is 100%.

Group of orthologs #27. Best score 840 bits
Score difference with first non-orthologous sequence - C.neoformans:840 P.pacificus:840

Q5KBA0              	100.00%		H3G214              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for H3G214 as seed ortholog is 100%.

Group of orthologs #28. Best score 831 bits
Score difference with first non-orthologous sequence - C.neoformans:602 P.pacificus:372

Q5KIQ1              	100.00%		H3FMD8              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for H3FMD8 as seed ortholog is 100%.

Group of orthologs #29. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.pacificus:282

Q5K8W5              	100.00%		H3E5X7              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 100%.
Bootstrap support for H3E5X7 as seed ortholog is 100%.

Group of orthologs #30. Best score 820 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.pacificus:820

Q5KH79              	100.00%		H3EWV4              	100.00%
Bootstrap support for Q5KH79 as seed ortholog is 100%.
Bootstrap support for H3EWV4 as seed ortholog is 100%.

Group of orthologs #31. Best score 817 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.pacificus:317

Q5KEX1              	100.00%		H3FCP4              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 100%.
Bootstrap support for H3FCP4 as seed ortholog is 100%.

Group of orthologs #32. Best score 799 bits
Score difference with first non-orthologous sequence - C.neoformans:799 P.pacificus:119

Q5KGV5              	100.00%		H3E0X4              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for H3E0X4 as seed ortholog is 99%.

Group of orthologs #33. Best score 799 bits
Score difference with first non-orthologous sequence - C.neoformans:799 P.pacificus:799

Q5KIF6              	100.00%		H3FM78              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for H3FM78 as seed ortholog is 100%.

Group of orthologs #34. Best score 794 bits
Score difference with first non-orthologous sequence - C.neoformans:794 P.pacificus:794

Q5KDU2              	100.00%		H3FK41              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for H3FK41 as seed ortholog is 100%.

Group of orthologs #35. Best score 788 bits
Score difference with first non-orthologous sequence - C.neoformans:788 P.pacificus:716

Q5K7U0              	100.00%		H3E990              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for H3E990 as seed ortholog is 100%.

Group of orthologs #36. Best score 787 bits
Score difference with first non-orthologous sequence - C.neoformans:787 P.pacificus:372

Q5KBP7              	100.00%		H3FCM4              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for H3FCM4 as seed ortholog is 100%.

Group of orthologs #37. Best score 770 bits
Score difference with first non-orthologous sequence - C.neoformans:770 P.pacificus:770

Q5K8Q4              	100.00%		H3FXS7              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for H3FXS7 as seed ortholog is 100%.

Group of orthologs #38. Best score 762 bits
Score difference with first non-orthologous sequence - C.neoformans:546 P.pacificus:762

Q5KLE4              	100.00%		H3EV05              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for H3EV05 as seed ortholog is 100%.

Group of orthologs #39. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:434

Q5KKE7              	100.00%		H3FHL0              	100.00%
                    	       		H3FHL1              	71.71%
                    	       		H3FHK9              	57.24%
                    	       		H3DZP3              	48.68%
                    	       		H3DZP2              	42.76%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for H3FHL0 as seed ortholog is 100%.

Group of orthologs #40. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:619 P.pacificus:759

Q5KC33              	100.00%		H3F846              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for H3F846 as seed ortholog is 100%.

Group of orthologs #41. Best score 758 bits
Score difference with first non-orthologous sequence - C.neoformans:758 P.pacificus:702

P0CN30              	100.00%		B5RI02              	100.00%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for B5RI02 as seed ortholog is 100%.

Group of orthologs #42. Best score 753 bits
Score difference with first non-orthologous sequence - C.neoformans:399 P.pacificus:93

Q5KM62              	100.00%		H3FKE6              	100.00%
                    	       		H3DS34              	32.66%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for H3FKE6 as seed ortholog is 99%.

Group of orthologs #43. Best score 752 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.pacificus:84

Q5KN49              	100.00%		H3ECV4              	100.00%
                    	       		H3F4W5              	16.47%
                    	       		H3FSD9              	9.00%
Bootstrap support for Q5KN49 as seed ortholog is 99%.
Bootstrap support for H3ECV4 as seed ortholog is 85%.

Group of orthologs #44. Best score 748 bits
Score difference with first non-orthologous sequence - C.neoformans:547 P.pacificus:748

Q5KIB7              	100.00%		H3EQN7              	100.00%
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for H3EQN7 as seed ortholog is 100%.

Group of orthologs #45. Best score 748 bits
Score difference with first non-orthologous sequence - C.neoformans:748 P.pacificus:748

Q5KQ25              	100.00%		H3FY77              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for H3FY77 as seed ortholog is 100%.

Group of orthologs #46. Best score 732 bits
Score difference with first non-orthologous sequence - C.neoformans:732 P.pacificus:580

Q5KEF7              	100.00%		H3FED4              	100.00%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for H3FED4 as seed ortholog is 100%.

Group of orthologs #47. Best score 731 bits
Score difference with first non-orthologous sequence - C.neoformans:731 P.pacificus:644

Q5KN88              	100.00%		H3EKM5              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for H3EKM5 as seed ortholog is 100%.

Group of orthologs #48. Best score 728 bits
Score difference with first non-orthologous sequence - C.neoformans:728 P.pacificus:728

Q5KKQ6              	100.00%		H3G3N5              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for H3G3N5 as seed ortholog is 100%.

Group of orthologs #49. Best score 726 bits
Score difference with first non-orthologous sequence - C.neoformans:726 P.pacificus:253

Q5KBW0              	100.00%		H3F9B3              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for H3F9B3 as seed ortholog is 100%.

Group of orthologs #50. Best score 724 bits
Score difference with first non-orthologous sequence - C.neoformans:724 P.pacificus:619

Q5KFB9              	100.00%		H3F2I6              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for H3F2I6 as seed ortholog is 100%.

Group of orthologs #51. Best score 719 bits
Score difference with first non-orthologous sequence - C.neoformans:719 P.pacificus:719

Q5KAT3              	100.00%		H3FHC8              	100.00%
Bootstrap support for Q5KAT3 as seed ortholog is 100%.
Bootstrap support for H3FHC8 as seed ortholog is 100%.

Group of orthologs #52. Best score 718 bits
Score difference with first non-orthologous sequence - C.neoformans:718 P.pacificus:718

Q5KML2              	100.00%		H3F0U4              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for H3F0U4 as seed ortholog is 100%.

Group of orthologs #53. Best score 717 bits
Score difference with first non-orthologous sequence - C.neoformans:717 P.pacificus:586

Q5KFU0              	100.00%		H3FQP8              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for H3FQP8 as seed ortholog is 100%.

Group of orthologs #54. Best score 710 bits
Score difference with first non-orthologous sequence - C.neoformans:549 P.pacificus:260

Q5KCR8              	100.00%		H3EUR3              	100.00%
                    	       		H3FMW6              	22.14%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for H3EUR3 as seed ortholog is 100%.

Group of orthologs #55. Best score 707 bits
Score difference with first non-orthologous sequence - C.neoformans:512 P.pacificus:101

Q5KP06              	100.00%		H3FMF2              	100.00%
                    	       		H3FCG4              	62.26%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for H3FMF2 as seed ortholog is 100%.

Group of orthologs #56. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:706 P.pacificus:706

P0CN82              	100.00%		H3FBE1              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for H3FBE1 as seed ortholog is 100%.

Group of orthologs #57. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.pacificus:704

Q5K906              	100.00%		H3DYD4              	100.00%
Q5KDA3              	99.61%		
Bootstrap support for Q5K906 as seed ortholog is 73%.
Alternative seed ortholog is Q5KLT1 (44 bits away from this cluster)
Bootstrap support for H3DYD4 as seed ortholog is 100%.

Group of orthologs #58. Best score 697 bits
Score difference with first non-orthologous sequence - C.neoformans:697 P.pacificus:697

Q5KMN3              	100.00%		H3DZ95              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for H3DZ95 as seed ortholog is 100%.

Group of orthologs #59. Best score 695 bits
Score difference with first non-orthologous sequence - C.neoformans:695 P.pacificus:695

Q5KNM9              	100.00%		H3DYY8              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for H3DYY8 as seed ortholog is 100%.

Group of orthologs #60. Best score 689 bits
Score difference with first non-orthologous sequence - C.neoformans:689 P.pacificus:375

Q5KD67              	100.00%		H3FZT5              	100.00%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for H3FZT5 as seed ortholog is 100%.

Group of orthologs #61. Best score 678 bits
Score difference with first non-orthologous sequence - C.neoformans:678 P.pacificus:678

Q5KMU3              	100.00%		H3FVH0              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for H3FVH0 as seed ortholog is 100%.

Group of orthologs #62. Best score 669 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.pacificus:423

P0CL88              	100.00%		H3E611              	100.00%
Bootstrap support for P0CL88 as seed ortholog is 99%.
Bootstrap support for H3E611 as seed ortholog is 100%.

Group of orthologs #63. Best score 669 bits
Score difference with first non-orthologous sequence - C.neoformans:669 P.pacificus:669

Q5KF07              	100.00%		H3EW53              	100.00%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for H3EW53 as seed ortholog is 100%.

Group of orthologs #64. Best score 667 bits
Score difference with first non-orthologous sequence - C.neoformans:667 P.pacificus:278

Q5KNG1              	100.00%		H3FKN2              	100.00%
                    	       		H3G0R8              	48.34%
Bootstrap support for Q5KNG1 as seed ortholog is 100%.
Bootstrap support for H3FKN2 as seed ortholog is 99%.

Group of orthologs #65. Best score 665 bits
Score difference with first non-orthologous sequence - C.neoformans:517 P.pacificus:545

P0CN32              	100.00%		H3DS35              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for H3DS35 as seed ortholog is 100%.

Group of orthologs #66. Best score 664 bits
Score difference with first non-orthologous sequence - C.neoformans:664 P.pacificus:664

Q5KI64              	100.00%		H3F5L9              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for H3F5L9 as seed ortholog is 100%.

Group of orthologs #67. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 P.pacificus:660

P0CO10              	100.00%		H3EWJ4              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for H3EWJ4 as seed ortholog is 100%.

Group of orthologs #68. Best score 655 bits
Score difference with first non-orthologous sequence - C.neoformans:655 P.pacificus:343

Q5KGN2              	100.00%		H3E5Y1              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 100%.
Bootstrap support for H3E5Y1 as seed ortholog is 100%.

Group of orthologs #69. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 P.pacificus:654

Q5KI75              	100.00%		H3EGK2              	100.00%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for H3EGK2 as seed ortholog is 100%.

Group of orthologs #70. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 P.pacificus:654

Q5KHW3              	100.00%		H3EK05              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for H3EK05 as seed ortholog is 100%.

Group of orthologs #71. Best score 644 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.pacificus:489

P0CQ72              	100.00%		H3EQB2              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for H3EQB2 as seed ortholog is 100%.

Group of orthologs #72. Best score 643 bits
Score difference with first non-orthologous sequence - C.neoformans:289 P.pacificus:176

Q5KLI4              	100.00%		H3ESH7              	100.00%
Bootstrap support for Q5KLI4 as seed ortholog is 100%.
Bootstrap support for H3ESH7 as seed ortholog is 99%.

Group of orthologs #73. Best score 641 bits
Score difference with first non-orthologous sequence - C.neoformans:429 P.pacificus:641

Q5KBI1              	100.00%		H3F6N1              	100.00%
                    	       		H3F6U2              	51.98%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for H3F6N1 as seed ortholog is 100%.

Group of orthologs #74. Best score 640 bits
Score difference with first non-orthologous sequence - C.neoformans:640 P.pacificus:640

Q5KJ87              	100.00%		H3EHZ4              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for H3EHZ4 as seed ortholog is 100%.

Group of orthologs #75. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:345 P.pacificus:629

Q5KPI3              	100.00%		H3FWJ0              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for H3FWJ0 as seed ortholog is 100%.

Group of orthologs #76. Best score 627 bits
Score difference with first non-orthologous sequence - C.neoformans:627 P.pacificus:627

Q5KK44              	100.00%		H3EA24              	100.00%
Q5KK43              	48.14%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for H3EA24 as seed ortholog is 100%.

Group of orthologs #77. Best score 623 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.pacificus:623

Q5KLP9              	100.00%		H3F8L4              	100.00%
                    	       		H3FT13              	40.02%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for H3F8L4 as seed ortholog is 100%.

Group of orthologs #78. Best score 622 bits
Score difference with first non-orthologous sequence - C.neoformans:622 P.pacificus:426

Q5KDL3              	100.00%		H3DWB8              	100.00%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for H3DWB8 as seed ortholog is 100%.

Group of orthologs #79. Best score 622 bits
Score difference with first non-orthologous sequence - C.neoformans:622 P.pacificus:474

Q5K9R3              	100.00%		H3E395              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for H3E395 as seed ortholog is 100%.

Group of orthologs #80. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.pacificus:620

Q5KQ07              	100.00%		H3F659              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for H3F659 as seed ortholog is 100%.

Group of orthologs #81. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:361 P.pacificus:619

Q5K9H1              	100.00%		H3FK03              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for H3FK03 as seed ortholog is 100%.

Group of orthologs #82. Best score 614 bits
Score difference with first non-orthologous sequence - C.neoformans:614 P.pacificus:614

Q5KIF1              	100.00%		H3FH58              	100.00%
                    	       		H3FI64              	29.98%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for H3FH58 as seed ortholog is 100%.

Group of orthologs #83. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:566 P.pacificus:613

Q5KPQ9              	100.00%		H3E5K7              	100.00%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for H3E5K7 as seed ortholog is 100%.

Group of orthologs #84. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:606 P.pacificus:606

Q5KLI3              	100.00%		H3F1E1              	100.00%
                    	       		H3FMU6              	6.88%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for H3F1E1 as seed ortholog is 100%.

Group of orthologs #85. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.pacificus:606

Q5KB11              	100.00%		H3FYB7              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for H3FYB7 as seed ortholog is 100%.

Group of orthologs #86. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:338 P.pacificus:600

Q5KP40              	100.00%		H3FKC7              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for H3FKC7 as seed ortholog is 100%.

Group of orthologs #87. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:303 P.pacificus:251

P0CQ76              	100.00%		H3EWM0              	100.00%
                    	       		H3E2J0              	57.87%
Bootstrap support for P0CQ76 as seed ortholog is 99%.
Bootstrap support for H3EWM0 as seed ortholog is 100%.

Group of orthologs #88. Best score 591 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.pacificus:591

Q5KLA7              	100.00%		H3EAP3              	100.00%
Bootstrap support for Q5KLA7 as seed ortholog is 99%.
Bootstrap support for H3EAP3 as seed ortholog is 100%.

Group of orthologs #89. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:587 P.pacificus:587

Q5KCZ4              	100.00%		H3FVU3              	100.00%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for H3FVU3 as seed ortholog is 100%.

Group of orthologs #90. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:111

Q5KMH9              	100.00%		H3DYQ3              	100.00%
Bootstrap support for Q5KMH9 as seed ortholog is 93%.
Bootstrap support for H3DYQ3 as seed ortholog is 98%.

Group of orthologs #91. Best score 581 bits
Score difference with first non-orthologous sequence - C.neoformans:581 P.pacificus:581

Q5KIH6              	100.00%		H3DWE5              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for H3DWE5 as seed ortholog is 100%.

Group of orthologs #92. Best score 581 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.pacificus:581

Q5KE94              	100.00%		H3END3              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for H3END3 as seed ortholog is 100%.

Group of orthologs #93. Best score 575 bits
Score difference with first non-orthologous sequence - C.neoformans:303 P.pacificus:394

P0CQ70              	100.00%		H3DS62              	100.00%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for H3DS62 as seed ortholog is 100%.

Group of orthologs #94. Best score 575 bits
Score difference with first non-orthologous sequence - C.neoformans:575 P.pacificus:575

Q5KEG6              	100.00%		H3F1D0              	100.00%
Bootstrap support for Q5KEG6 as seed ortholog is 100%.
Bootstrap support for H3F1D0 as seed ortholog is 100%.

Group of orthologs #95. Best score 573 bits
Score difference with first non-orthologous sequence - C.neoformans:573 P.pacificus:365

Q5KAP2              	100.00%		H3FCA2              	100.00%
Bootstrap support for Q5KAP2 as seed ortholog is 100%.
Bootstrap support for H3FCA2 as seed ortholog is 100%.

Group of orthologs #96. Best score 573 bits
Score difference with first non-orthologous sequence - C.neoformans:512 P.pacificus:573

Q5KLW7              	100.00%		H3FT54              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for H3FT54 as seed ortholog is 100%.

Group of orthologs #97. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 P.pacificus:572

Q5KKV6              	100.00%		H3FRB3              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for H3FRB3 as seed ortholog is 100%.

Group of orthologs #98. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 P.pacificus:569

Q5K6X3              	100.00%		H3EUZ5              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for H3EUZ5 as seed ortholog is 100%.

Group of orthologs #99. Best score 568 bits
Score difference with first non-orthologous sequence - C.neoformans:568 P.pacificus:362

Q5KLV5              	100.00%		H3E8C2              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for H3E8C2 as seed ortholog is 100%.

Group of orthologs #100. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:567 P.pacificus:41

Q5KP96              	100.00%		H3EZ35              	100.00%
Q5KI71              	6.33%		H3E9M7              	37.30%
Bootstrap support for Q5KP96 as seed ortholog is 100%.
Bootstrap support for H3EZ35 as seed ortholog is 74%.
Alternative seed ortholog is H3ECK9 (41 bits away from this cluster)

Group of orthologs #101. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 P.pacificus:564

Q5KCZ2              	100.00%		H3F9F5              	100.00%
                    	       		H3FYF8              	87.07%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for H3F9F5 as seed ortholog is 100%.

Group of orthologs #102. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.pacificus:361

P0CQ80              	100.00%		H3DYV5              	100.00%
Bootstrap support for P0CQ80 as seed ortholog is 100%.
Bootstrap support for H3DYV5 as seed ortholog is 100%.

Group of orthologs #103. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:562 P.pacificus:562

P0CM96              	100.00%		H3F208              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for H3F208 as seed ortholog is 100%.

Group of orthologs #104. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:562 P.pacificus:562

Q5KJR9              	100.00%		H3EPS1              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for H3EPS1 as seed ortholog is 100%.

Group of orthologs #105. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 P.pacificus:558

Q5KQ45              	100.00%		H3DYE8              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for H3DYE8 as seed ortholog is 100%.

Group of orthologs #106. Best score 556 bits
Score difference with first non-orthologous sequence - C.neoformans:556 P.pacificus:375

Q5K7R3              	100.00%		H3FL93              	100.00%
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for H3FL93 as seed ortholog is 100%.

Group of orthologs #107. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 P.pacificus:554

Q5KB99              	100.00%		H3EHN8              	100.00%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for H3EHN8 as seed ortholog is 100%.

Group of orthologs #108. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 P.pacificus:117

Q5KC69              	100.00%		H3F592              	100.00%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for H3F592 as seed ortholog is 99%.

Group of orthologs #109. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:355 P.pacificus:344

P0CQ84              	100.00%		H3FZT2              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for H3FZT2 as seed ortholog is 100%.

Group of orthologs #110. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 P.pacificus:552

Q5KBF6              	100.00%		H3FXT9              	100.00%
Bootstrap support for Q5KBF6 as seed ortholog is 100%.
Bootstrap support for H3FXT9 as seed ortholog is 100%.

Group of orthologs #111. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.pacificus:312

Q5KKP2              	100.00%		H3FTC8              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 99%.
Bootstrap support for H3FTC8 as seed ortholog is 100%.

Group of orthologs #112. Best score 551 bits
Score difference with first non-orthologous sequence - C.neoformans:551 P.pacificus:551

Q5KFS5              	100.00%		H3EZU4              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for H3EZU4 as seed ortholog is 100%.

Group of orthologs #113. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 P.pacificus:549

Q5KLT9              	100.00%		H3E3B4              	100.00%
Bootstrap support for Q5KLT9 as seed ortholog is 100%.
Bootstrap support for H3E3B4 as seed ortholog is 100%.

Group of orthologs #114. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:548 P.pacificus:548

Q5KLD7              	100.00%		H3EHS1              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for H3EHS1 as seed ortholog is 100%.

Group of orthologs #115. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:548 P.pacificus:482

Q5KIW8              	100.00%		H3G0Z8              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for H3G0Z8 as seed ortholog is 100%.

Group of orthologs #116. Best score 544 bits
Score difference with first non-orthologous sequence - C.neoformans:291 P.pacificus:544

Q5KIC0              	100.00%		H3FYV9              	100.00%
                    	       		H3EWU7              	39.04%
                    	       		H3DUK5              	20.69%
Bootstrap support for Q5KIC0 as seed ortholog is 99%.
Bootstrap support for H3FYV9 as seed ortholog is 100%.

Group of orthologs #117. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.pacificus:397

P0CQ96              	100.00%		H3FJM4              	100.00%
Bootstrap support for P0CQ96 as seed ortholog is 100%.
Bootstrap support for H3FJM4 as seed ortholog is 100%.

Group of orthologs #118. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.pacificus:138

Q5KK89              	100.00%		H3EP97              	100.00%
Bootstrap support for Q5KK89 as seed ortholog is 97%.
Bootstrap support for H3EP97 as seed ortholog is 99%.

Group of orthologs #119. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 P.pacificus:537

Q5KH73              	100.00%		H3FKI3              	100.00%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for H3FKI3 as seed ortholog is 100%.

Group of orthologs #120. Best score 536 bits
Score difference with first non-orthologous sequence - C.neoformans:536 P.pacificus:536

Q5K899              	100.00%		H3EXS5              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for H3EXS5 as seed ortholog is 100%.

Group of orthologs #121. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:426 P.pacificus:206

Q5KB93              	100.00%		H3EWD5              	100.00%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for H3EWD5 as seed ortholog is 100%.

Group of orthologs #122. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.pacificus:534

Q5KLG5              	100.00%		H3FCP5              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for H3FCP5 as seed ortholog is 100%.

Group of orthologs #123. Best score 531 bits
Score difference with first non-orthologous sequence - C.neoformans:531 P.pacificus:531

Q5K7K5              	100.00%		H3F5M0              	100.00%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for H3F5M0 as seed ortholog is 100%.

Group of orthologs #124. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 P.pacificus:530

Q5KC94              	100.00%		H3EJ01              	100.00%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for H3EJ01 as seed ortholog is 100%.

Group of orthologs #125. Best score 528 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:131

Q5KEX3              	100.00%		H3FSN1              	100.00%
Bootstrap support for Q5KEX3 as seed ortholog is 96%.
Bootstrap support for H3FSN1 as seed ortholog is 99%.

Group of orthologs #126. Best score 526 bits
Score difference with first non-orthologous sequence - C.neoformans:526 P.pacificus:526

Q5KFJ3              	100.00%		H3FRP5              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for H3FRP5 as seed ortholog is 100%.

Group of orthologs #127. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:31 P.pacificus:136

Q5KF65              	100.00%		H3G2C3              	100.00%
                    	       		H3F640              	26.73%
Bootstrap support for Q5KF65 as seed ortholog is 71%.
Alternative seed ortholog is Q5KD72 (31 bits away from this cluster)
Bootstrap support for H3G2C3 as seed ortholog is 99%.

Group of orthologs #128. Best score 523 bits
Score difference with first non-orthologous sequence - C.neoformans:523 P.pacificus:523

Q5KDD4              	100.00%		H3EZZ7              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for H3EZZ7 as seed ortholog is 100%.

Group of orthologs #129. Best score 521 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.pacificus:416

Q5KN48              	100.00%		H3FWL4              	100.00%
                    	       		H3DYK8              	39.14%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for H3FWL4 as seed ortholog is 100%.

Group of orthologs #130. Best score 521 bits
Score difference with first non-orthologous sequence - C.neoformans:521 P.pacificus:521

Q5KMQ2              	100.00%		H3E3J0              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for H3E3J0 as seed ortholog is 100%.

Group of orthologs #131. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:520 P.pacificus:520

Q5K7C3              	100.00%		H3EKF0              	100.00%
Bootstrap support for Q5K7C3 as seed ortholog is 100%.
Bootstrap support for H3EKF0 as seed ortholog is 100%.

Group of orthologs #132. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:519 P.pacificus:519

P0CO08              	100.00%		H3G242              	100.00%
Bootstrap support for P0CO08 as seed ortholog is 100%.
Bootstrap support for H3G242 as seed ortholog is 100%.

Group of orthologs #133. Best score 518 bits
Score difference with first non-orthologous sequence - C.neoformans:518 P.pacificus:518

P0CR26              	100.00%		H3DSG7              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for H3DSG7 as seed ortholog is 100%.

Group of orthologs #134. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 P.pacificus:515

Q5KP26              	100.00%		H3DZU9              	100.00%
Bootstrap support for Q5KP26 as seed ortholog is 100%.
Bootstrap support for H3DZU9 as seed ortholog is 100%.

Group of orthologs #135. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.pacificus:66

Q5KKV8              	100.00%		H3EGH5              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 85%.
Bootstrap support for H3EGH5 as seed ortholog is 90%.

Group of orthologs #136. Best score 513 bits
Score difference with first non-orthologous sequence - C.neoformans:513 P.pacificus:219

Q5KKA5              	100.00%		H3EFI3              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for H3EFI3 as seed ortholog is 100%.

Group of orthologs #137. Best score 511 bits
Score difference with first non-orthologous sequence - C.neoformans:511 P.pacificus:284

Q5KKU4              	100.00%		H3ETR7              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for H3ETR7 as seed ortholog is 100%.

Group of orthologs #138. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 P.pacificus:341

Q5K7B5              	100.00%		H3FK94              	100.00%
                    	       		H3FS39              	40.00%
                    	       		H3FJ77              	16.83%
                    	       		H3FJB6              	14.17%
                    	       		H3EFS7              	12.17%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for H3FK94 as seed ortholog is 100%.

Group of orthologs #139. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 P.pacificus:310

Q5KP62              	100.00%		H3E0Q4              	100.00%
                    	       		H3ES66              	31.33%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for H3E0Q4 as seed ortholog is 100%.

Group of orthologs #140. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:415 P.pacificus:277

Q5KHV9              	100.00%		H3EIY5              	100.00%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for H3EIY5 as seed ortholog is 100%.

Group of orthologs #141. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 P.pacificus:507

Q5KLA1              	100.00%		H3F9V0              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for H3F9V0 as seed ortholog is 100%.

Group of orthologs #142. Best score 506 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.pacificus:340

Q5KBN2              	100.00%		H3F8P7              	100.00%
Q5KIR5              	17.44%		
Bootstrap support for Q5KBN2 as seed ortholog is 100%.
Bootstrap support for H3F8P7 as seed ortholog is 100%.

Group of orthologs #143. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:505 P.pacificus:505

Q5KII0              	100.00%		H3F2P7              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for H3F2P7 as seed ortholog is 100%.

Group of orthologs #144. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.pacificus:238

P0CQ74              	100.00%		H3FYF2              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for H3FYF2 as seed ortholog is 100%.

Group of orthologs #145. Best score 504 bits
Score difference with first non-orthologous sequence - C.neoformans:504 P.pacificus:89

Q5KIN6              	100.00%		H3FNX0              	100.00%
                    	       		H3G1E4              	32.10%
                    	       		H3F3E5              	11.83%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for H3FNX0 as seed ortholog is 91%.

Group of orthologs #146. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:502 P.pacificus:502

Q5KMJ4              	100.00%		H3DRZ4              	100.00%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for H3DRZ4 as seed ortholog is 100%.

Group of orthologs #147. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:502 P.pacificus:502

P0CM88              	100.00%		H3F4N1              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for H3F4N1 as seed ortholog is 100%.

Group of orthologs #148. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.pacificus:499

Q5KHJ1              	100.00%		H3DTC8              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 99%.
Bootstrap support for H3DTC8 as seed ortholog is 100%.

Group of orthologs #149. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:499

Q5KBX3              	100.00%		H3ENB4              	100.00%
Bootstrap support for Q5KBX3 as seed ortholog is 98%.
Bootstrap support for H3ENB4 as seed ortholog is 100%.

Group of orthologs #150. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 P.pacificus:498

Q5K9B2              	100.00%		H3E0Q0              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for H3E0Q0 as seed ortholog is 100%.

Group of orthologs #151. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 P.pacificus:498

Q5KMG4              	100.00%		H3FSA2              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for H3FSA2 as seed ortholog is 100%.

Group of orthologs #152. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 P.pacificus:497

P0CQ22              	100.00%		H3EHQ5              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for H3EHQ5 as seed ortholog is 100%.

Group of orthologs #153. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:293 P.pacificus:255

Q5KE58              	100.00%		H3EM57              	100.00%
Bootstrap support for Q5KE58 as seed ortholog is 100%.
Bootstrap support for H3EM57 as seed ortholog is 100%.

Group of orthologs #154. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:378 P.pacificus:493

Q5KQ47              	100.00%		H3FC42              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for H3FC42 as seed ortholog is 100%.

Group of orthologs #155. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:283 P.pacificus:491

Q5KKB4              	100.00%		H3FYV4              	100.00%
Bootstrap support for Q5KKB4 as seed ortholog is 100%.
Bootstrap support for H3FYV4 as seed ortholog is 100%.

Group of orthologs #156. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:490 P.pacificus:324

Q5K9E3              	100.00%		H3EB14              	100.00%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for H3EB14 as seed ortholog is 100%.

Group of orthologs #157. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:392 P.pacificus:488

Q5K7P9              	100.00%		H3E6G5              	100.00%
Bootstrap support for Q5K7P9 as seed ortholog is 100%.
Bootstrap support for H3E6G5 as seed ortholog is 100%.

Group of orthologs #158. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:488 P.pacificus:488

Q5KK90              	100.00%		H3FK11              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for H3FK11 as seed ortholog is 100%.

Group of orthologs #159. Best score 486 bits
Score difference with first non-orthologous sequence - C.neoformans:486 P.pacificus:133

Q5KAU9              	100.00%		H3FCH9              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for H3FCH9 as seed ortholog is 99%.

Group of orthologs #160. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.pacificus:305

Q5KNA9              	100.00%		H3EX33              	100.00%
Bootstrap support for Q5KNA9 as seed ortholog is 100%.
Bootstrap support for H3EX33 as seed ortholog is 100%.

Group of orthologs #161. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 P.pacificus:484

Q5KAU8              	100.00%		H3E2U4              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for H3E2U4 as seed ortholog is 100%.

Group of orthologs #162. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 P.pacificus:482

Q5KD10              	100.00%		H3E6E8              	100.00%
Bootstrap support for Q5KD10 as seed ortholog is 100%.
Bootstrap support for H3E6E8 as seed ortholog is 100%.

Group of orthologs #163. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:382 P.pacificus:388

P0CP46              	100.00%		H3FCZ6              	100.00%
                    	       		H3FCZ2              	33.41%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for H3FCZ6 as seed ortholog is 100%.

Group of orthologs #164. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.pacificus:478

Q5KH38              	100.00%		H3E646              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for H3E646 as seed ortholog is 100%.

Group of orthologs #165. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 P.pacificus:478

Q5KD08              	100.00%		H3F9F4              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for H3F9F4 as seed ortholog is 100%.

Group of orthologs #166. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.pacificus:196

Q5K7L0              	100.00%		H3EQN5              	100.00%
Bootstrap support for Q5K7L0 as seed ortholog is 100%.
Bootstrap support for H3EQN5 as seed ortholog is 99%.

Group of orthologs #167. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 P.pacificus:196

Q5KCG5              	100.00%		H3F915              	100.00%
                    	       		H3FKX3              	53.79%
Bootstrap support for Q5KCG5 as seed ortholog is 100%.
Bootstrap support for H3F915 as seed ortholog is 99%.

Group of orthologs #168. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.pacificus:472

P0CN74              	100.00%		H3ESL5              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 99%.
Bootstrap support for H3ESL5 as seed ortholog is 100%.

Group of orthologs #169. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:345 P.pacificus:117

Q5KPW4              	100.00%		H3FGG2              	100.00%
Bootstrap support for Q5KPW4 as seed ortholog is 100%.
Bootstrap support for H3FGG2 as seed ortholog is 99%.

Group of orthologs #170. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:471 P.pacificus:471

P0CR28              	100.00%		H3G281              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for H3G281 as seed ortholog is 100%.

Group of orthologs #171. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 P.pacificus:470

Q5KEY7              	100.00%		H3DXN3              	100.00%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for H3DXN3 as seed ortholog is 100%.

Group of orthologs #172. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 P.pacificus:470

Q5KJT2              	100.00%		H3EZY3              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for H3EZY3 as seed ortholog is 100%.

Group of orthologs #173. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 P.pacificus:49

Q5KGH1              	100.00%		H3F585              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for H3F585 as seed ortholog is 85%.

Group of orthologs #174. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 P.pacificus:355

Q5KHN7              	100.00%		H3EL89              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for H3EL89 as seed ortholog is 100%.

Group of orthologs #175. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 P.pacificus:260

Q5KH19              	100.00%		H3FNC3              	100.00%
Bootstrap support for Q5KH19 as seed ortholog is 100%.
Bootstrap support for H3FNC3 as seed ortholog is 100%.

Group of orthologs #176. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.pacificus:313

Q5KMR8              	100.00%		H3EFN8              	100.00%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for H3EFN8 as seed ortholog is 100%.

Group of orthologs #177. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:319 P.pacificus:459

Q5KHQ8              	100.00%		H3E619              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for H3E619 as seed ortholog is 100%.

Group of orthologs #178. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 P.pacificus:458

Q5KFJ4              	100.00%		H3ES02              	100.00%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for H3ES02 as seed ortholog is 100%.

Group of orthologs #179. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.pacificus:61

Q5KI40              	100.00%		H3FT78              	100.00%
Bootstrap support for Q5KI40 as seed ortholog is 99%.
Bootstrap support for H3FT78 as seed ortholog is 98%.

Group of orthologs #180. Best score 455 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:455

Q5K8E2              	100.00%		H3F8T7              	100.00%
Bootstrap support for Q5K8E2 as seed ortholog is 93%.
Bootstrap support for H3F8T7 as seed ortholog is 100%.

Group of orthologs #181. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 P.pacificus:24

Q5KME1              	100.00%		H3E2J8              	100.00%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for H3E2J8 as seed ortholog is 85%.

Group of orthologs #182. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:307 P.pacificus:323

Q5KCW4              	100.00%		H3FNL0              	100.00%
Bootstrap support for Q5KCW4 as seed ortholog is 100%.
Bootstrap support for H3FNL0 as seed ortholog is 100%.

Group of orthologs #183. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 P.pacificus:451

P0CO94              	100.00%		H3DUI1              	100.00%
Bootstrap support for P0CO94 as seed ortholog is 100%.
Bootstrap support for H3DUI1 as seed ortholog is 100%.

Group of orthologs #184. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:99

Q5KHP4              	100.00%		H3FRS5              	100.00%
Bootstrap support for Q5KHP4 as seed ortholog is 74%.
Alternative seed ortholog is P0CP00 (45 bits away from this cluster)
Bootstrap support for H3FRS5 as seed ortholog is 96%.

Group of orthologs #185. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:450 P.pacificus:255

Q5KA27              	100.00%		H3EK16              	100.00%
Bootstrap support for Q5KA27 as seed ortholog is 100%.
Bootstrap support for H3EK16 as seed ortholog is 100%.

Group of orthologs #186. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.pacificus:448

Q5K6V0              	100.00%		H3F8T1              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for H3F8T1 as seed ortholog is 100%.

Group of orthologs #187. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 P.pacificus:128

P0CN84              	100.00%		H3E758              	100.00%
                    	       		H3EPA5              	58.58%
                    	       		H3EKK7              	6.33%
Bootstrap support for P0CN84 as seed ortholog is 100%.
Bootstrap support for H3E758 as seed ortholog is 99%.

Group of orthologs #188. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 P.pacificus:446

Q5KKT5              	100.00%		H3FND8              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for H3FND8 as seed ortholog is 100%.

Group of orthologs #189. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:443 P.pacificus:443

P0CS34              	100.00%		H3EXM9              	100.00%
Bootstrap support for P0CS34 as seed ortholog is 100%.
Bootstrap support for H3EXM9 as seed ortholog is 100%.

Group of orthologs #190. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.pacificus:293

Q5KP35              	100.00%		H3DVW8              	100.00%
Bootstrap support for Q5KP35 as seed ortholog is 100%.
Bootstrap support for H3DVW8 as seed ortholog is 100%.

Group of orthologs #191. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.pacificus:164

Q5KDB7              	100.00%		H3F5G1              	100.00%
Bootstrap support for Q5KDB7 as seed ortholog is 99%.
Bootstrap support for H3F5G1 as seed ortholog is 99%.

Group of orthologs #192. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.pacificus:14

Q5KH88              	100.00%		H3G2C5              	100.00%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for H3G2C5 as seed ortholog is 59%.
Alternative seed ortholog is H3E644 (14 bits away from this cluster)

Group of orthologs #193. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 P.pacificus:435

Q5KPL5              	100.00%		H3F534              	100.00%
Bootstrap support for Q5KPL5 as seed ortholog is 100%.
Bootstrap support for H3F534 as seed ortholog is 100%.

Group of orthologs #194. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.pacificus:138

Q5KIV9              	100.00%		H3ENB3              	100.00%
Q5KBZ0              	12.01%		
Bootstrap support for Q5KIV9 as seed ortholog is 99%.
Bootstrap support for H3ENB3 as seed ortholog is 99%.

Group of orthologs #195. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 P.pacificus:429

Q5KPT1              	100.00%		H3FMJ8              	100.00%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for H3FMJ8 as seed ortholog is 100%.

Group of orthologs #196. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.pacificus:44

Q5K745              	100.00%		H3DYS0              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for H3DYS0 as seed ortholog is 79%.

Group of orthologs #197. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.pacificus:337

Q5K722              	100.00%		H3FSX5              	100.00%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for H3FSX5 as seed ortholog is 100%.

Group of orthologs #198. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 P.pacificus:425

Q5KKK6              	100.00%		H3EQ32              	100.00%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for H3EQ32 as seed ortholog is 100%.

Group of orthologs #199. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 P.pacificus:424

Q5K8I1              	100.00%		H3E902              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for H3E902 as seed ortholog is 100%.

Group of orthologs #200. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:4 P.pacificus:158

P0CO18              	100.00%		H3FW69              	100.00%
Bootstrap support for P0CO18 as seed ortholog is 47%.
Alternative seed ortholog is Q5K960 (4 bits away from this cluster)
Bootstrap support for H3FW69 as seed ortholog is 99%.

Group of orthologs #201. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:294

Q5KAU0              	100.00%		H3DSF5              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 79%.
Bootstrap support for H3DSF5 as seed ortholog is 100%.

Group of orthologs #202. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 P.pacificus:421

Q5K9A9              	100.00%		H3FVE7              	100.00%
                    	       		H3FJK2              	93.40%
Bootstrap support for Q5K9A9 as seed ortholog is 100%.
Bootstrap support for H3FVE7 as seed ortholog is 100%.

Group of orthologs #203. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 P.pacificus:418

Q5KF37              	100.00%		H3ESQ1              	100.00%
Bootstrap support for Q5KF37 as seed ortholog is 100%.
Bootstrap support for H3ESQ1 as seed ortholog is 100%.

Group of orthologs #204. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.pacificus:417

Q5KDY7              	100.00%		H3G1Y8              	100.00%
Bootstrap support for Q5KDY7 as seed ortholog is 94%.
Bootstrap support for H3G1Y8 as seed ortholog is 100%.

Group of orthologs #205. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.pacificus:413

Q5KJY4              	100.00%		H3E9S2              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for H3E9S2 as seed ortholog is 100%.

Group of orthologs #206. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.pacificus:413

Q5KA00              	100.00%		H3ES59              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for H3ES59 as seed ortholog is 100%.

Group of orthologs #207. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.pacificus:161

P0CQ88              	100.00%		H3F6M9              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 100%.
Bootstrap support for H3F6M9 as seed ortholog is 99%.

Group of orthologs #208. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.pacificus:172

Q5KIA2              	100.00%		H3FYF0              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for H3FYF0 as seed ortholog is 99%.

Group of orthologs #209. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.pacificus:413

Q5KGK2              	100.00%		H3G3C6              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 99%.
Bootstrap support for H3G3C6 as seed ortholog is 100%.

Group of orthologs #210. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:343 P.pacificus:189

Q5KHZ4              	100.00%		H3F6E9              	100.00%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for H3F6E9 as seed ortholog is 99%.

Group of orthologs #211. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.pacificus:410

Q5KDX5              	100.00%		H3EG00              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for H3EG00 as seed ortholog is 100%.

Group of orthologs #212. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:409 P.pacificus:409

Q5KDR1              	100.00%		H3EPR6              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for H3EPR6 as seed ortholog is 100%.

Group of orthologs #213. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:286

Q5KDX8              	100.00%		H3F6Q4              	100.00%
Bootstrap support for Q5KDX8 as seed ortholog is 97%.
Bootstrap support for H3F6Q4 as seed ortholog is 100%.

Group of orthologs #214. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.pacificus:406

Q5KE01              	100.00%		H3DRJ6              	100.00%
                    	       		H3ESU2              	9.52%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for H3DRJ6 as seed ortholog is 100%.

Group of orthologs #215. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.pacificus:320

F5HFW5              	100.00%		H3FAW4              	100.00%
                    	       		H3F5R6              	41.89%
Bootstrap support for F5HFW5 as seed ortholog is 100%.
Bootstrap support for H3FAW4 as seed ortholog is 100%.

Group of orthologs #216. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.pacificus:203

Q5KNR6              	100.00%		H3EQS7              	100.00%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for H3EQS7 as seed ortholog is 100%.

Group of orthologs #217. Best score 405 bits
Score difference with first non-orthologous sequence - C.neoformans:405 P.pacificus:405

Q5KNC3              	100.00%		H3DXD0              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for H3DXD0 as seed ortholog is 100%.

Group of orthologs #218. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.pacificus:403

Q5KEV3              	100.00%		H3E5L9              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for H3E5L9 as seed ortholog is 100%.

Group of orthologs #219. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.pacificus:151

Q5KGF6              	100.00%		H3EUH5              	100.00%
Bootstrap support for Q5KGF6 as seed ortholog is 100%.
Bootstrap support for H3EUH5 as seed ortholog is 99%.

Group of orthologs #220. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.pacificus:212

Q5KEJ1              	100.00%		H3G2B9              	100.00%
Bootstrap support for Q5KEJ1 as seed ortholog is 99%.
Bootstrap support for H3G2B9 as seed ortholog is 100%.

Group of orthologs #221. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:334 P.pacificus:399

Q5K8Q2              	100.00%		H3EZC5              	100.00%
Bootstrap support for Q5K8Q2 as seed ortholog is 100%.
Bootstrap support for H3EZC5 as seed ortholog is 100%.

Group of orthologs #222. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:397 P.pacificus:397

Q5KMA4              	100.00%		H3DZN7              	100.00%
Bootstrap support for Q5KMA4 as seed ortholog is 100%.
Bootstrap support for H3DZN7 as seed ortholog is 100%.

Group of orthologs #223. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 P.pacificus:97

Q5KPN7              	100.00%		H3E485              	100.00%
                    	       		H3FAN2              	15.72%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for H3E485 as seed ortholog is 99%.

Group of orthologs #224. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.pacificus:226

Q5KG30              	100.00%		H3DT85              	100.00%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for H3DT85 as seed ortholog is 100%.

Group of orthologs #225. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.pacificus:393

P0CR70              	100.00%		H3F4T2              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for H3F4T2 as seed ortholog is 100%.

Group of orthologs #226. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 P.pacificus:392

Q5KNR0              	100.00%		H3EW12              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for H3EW12 as seed ortholog is 100%.

Group of orthologs #227. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 P.pacificus:392

Q5K8F7              	100.00%		H3FKM7              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for H3FKM7 as seed ortholog is 100%.

Group of orthologs #228. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 P.pacificus:391

Q5KII9              	100.00%		H3F2D7              	100.00%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for H3F2D7 as seed ortholog is 100%.

Group of orthologs #229. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.pacificus:314

Q5KEQ4              	100.00%		H3FYH0              	100.00%
                    	       		H3FYB9              	65.47%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for H3FYH0 as seed ortholog is 100%.

Group of orthologs #230. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 P.pacificus:386

Q5KJH8              	100.00%		H3F4N3              	100.00%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for H3F4N3 as seed ortholog is 100%.

Group of orthologs #231. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.pacificus:385

Q5KDZ3              	100.00%		H3EHX5              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 100%.
Bootstrap support for H3EHX5 as seed ortholog is 100%.

Group of orthologs #232. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 P.pacificus:384

Q5KAF2              	100.00%		H3ENS0              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for H3ENS0 as seed ortholog is 100%.

Group of orthologs #233. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 P.pacificus:383

Q5KJX8              	100.00%		H3EDA3              	100.00%
Bootstrap support for Q5KJX8 as seed ortholog is 100%.
Bootstrap support for H3EDA3 as seed ortholog is 100%.

Group of orthologs #234. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 P.pacificus:383

Q5KGR5              	100.00%		H3F6V7              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 100%.
Bootstrap support for H3F6V7 as seed ortholog is 100%.

Group of orthologs #235. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 P.pacificus:383

Q5KH85              	100.00%		H3F8D9              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for H3F8D9 as seed ortholog is 100%.

Group of orthologs #236. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.pacificus:115

Q5KP72              	100.00%		H3FCI9              	100.00%
Q5KGH3              	12.36%		
Bootstrap support for Q5KP72 as seed ortholog is 99%.
Bootstrap support for H3FCI9 as seed ortholog is 99%.

Group of orthologs #237. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 P.pacificus:382

P0CQ34              	100.00%		H3G2E9              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for H3G2E9 as seed ortholog is 100%.

Group of orthologs #238. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.pacificus:381

Q5KJI8              	100.00%		H3F4W3              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for H3F4W3 as seed ortholog is 100%.

Group of orthologs #239. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.pacificus:379

Q5KLT3              	100.00%		H3EC12              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 100%.
Bootstrap support for H3EC12 as seed ortholog is 100%.

Group of orthologs #240. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:193

P0CQ82              	100.00%		H3EFM0              	100.00%
Bootstrap support for P0CQ82 as seed ortholog is 100%.
Bootstrap support for H3EFM0 as seed ortholog is 100%.

Group of orthologs #241. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.pacificus:376

Q5KLU5              	100.00%		H3FL10              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for H3FL10 as seed ortholog is 100%.

Group of orthologs #242. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.pacificus:376

Q5KAH4              	100.00%		H3FZ78              	100.00%
Bootstrap support for Q5KAH4 as seed ortholog is 100%.
Bootstrap support for H3FZ78 as seed ortholog is 100%.

Group of orthologs #243. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.pacificus:163

Q5KHB5              	100.00%		H3G1W8              	100.00%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for H3G1W8 as seed ortholog is 99%.

Group of orthologs #244. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:270

Q5KM80              	100.00%		H3EH96              	100.00%
Bootstrap support for Q5KM80 as seed ortholog is 99%.
Bootstrap support for H3EH96 as seed ortholog is 99%.

Group of orthologs #245. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.pacificus:374

P0CO20              	100.00%		H3EV38              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for H3EV38 as seed ortholog is 100%.

Group of orthologs #246. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.pacificus:374

Q5KGD3              	100.00%		H3ELB4              	100.00%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for H3ELB4 as seed ortholog is 100%.

Group of orthologs #247. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 P.pacificus:373

Q5KKS5              	100.00%		H3FC61              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for H3FC61 as seed ortholog is 100%.

Group of orthologs #248. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:18 P.pacificus:371

Q5K758              	100.00%		H3FK15              	100.00%
Bootstrap support for Q5K758 as seed ortholog is 64%.
Alternative seed ortholog is Q5KEY3 (18 bits away from this cluster)
Bootstrap support for H3FK15 as seed ortholog is 100%.

Group of orthologs #249. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.pacificus:216

Q5KMP3              	100.00%		H3F473              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for H3F473 as seed ortholog is 100%.

Group of orthologs #250. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:147 P.pacificus:198

Q5KNW6              	100.00%		H3DYX6              	100.00%
Bootstrap support for Q5KNW6 as seed ortholog is 99%.
Bootstrap support for H3DYX6 as seed ortholog is 99%.

Group of orthologs #251. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.pacificus:263

Q5KDQ7              	100.00%		H3EZP1              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for H3EZP1 as seed ortholog is 100%.

Group of orthologs #252. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.pacificus:369

Q5KP39              	100.00%		H3EQI1              	100.00%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for H3EQI1 as seed ortholog is 100%.

Group of orthologs #253. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.pacificus:369

Q5KES4              	100.00%		H3FKF6              	100.00%
Bootstrap support for Q5KES4 as seed ortholog is 100%.
Bootstrap support for H3FKF6 as seed ortholog is 100%.

Group of orthologs #254. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.pacificus:368

Q5KKZ9              	100.00%		H3DWS5              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for H3DWS5 as seed ortholog is 100%.

Group of orthologs #255. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.pacificus:368

Q5KAX5              	100.00%		H3EGQ4              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for H3EGQ4 as seed ortholog is 100%.

Group of orthologs #256. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.pacificus:368

Q5K8D2              	100.00%		H3ETQ2              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for H3ETQ2 as seed ortholog is 100%.

Group of orthologs #257. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:123

Q5KHS2              	100.00%		H3DU87              	100.00%
Bootstrap support for Q5KHS2 as seed ortholog is 100%.
Bootstrap support for H3DU87 as seed ortholog is 99%.

Group of orthologs #258. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:30 P.pacificus:186

Q5KCX1              	100.00%		H3FQV0              	100.00%
Bootstrap support for Q5KCX1 as seed ortholog is 83%.
Bootstrap support for H3FQV0 as seed ortholog is 99%.

Group of orthologs #259. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.pacificus:366

Q5KMC0              	100.00%		H3FU69              	100.00%
                    	       		H3FM68              	67.05%
Bootstrap support for Q5KMC0 as seed ortholog is 100%.
Bootstrap support for H3FU69 as seed ortholog is 100%.

Group of orthologs #260. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.pacificus:366

P0CQ98              	100.00%		H3DV76              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for H3DV76 as seed ortholog is 100%.

Group of orthologs #261. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 P.pacificus:365

P0CR52              	100.00%		H3FRF4              	100.00%
Bootstrap support for P0CR52 as seed ortholog is 100%.
Bootstrap support for H3FRF4 as seed ortholog is 100%.

Group of orthologs #262. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:174

Q5KLZ4              	100.00%		H3ET30              	100.00%
                    	       		H3FWV0              	20.12%
                    	       		H3E422              	9.45%
                    	       		H3FAH9              	7.32%
Bootstrap support for Q5KLZ4 as seed ortholog is 99%.
Bootstrap support for H3ET30 as seed ortholog is 100%.

Group of orthologs #263. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.pacificus:364

Q5KNL1              	100.00%		H3E4V5              	100.00%
                    	       		H3E4V8              	49.57%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for H3E4V5 as seed ortholog is 100%.

Group of orthologs #264. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.pacificus:364

Q5KE74              	100.00%		H3EA32              	100.00%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for H3EA32 as seed ortholog is 100%.

Group of orthologs #265. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.pacificus:364

Q5KKG9              	100.00%		H3FYE0              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for H3FYE0 as seed ortholog is 100%.

Group of orthologs #266. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:26 P.pacificus:158

Q5K8Q3              	100.00%		H3ESS7              	91.52%
Q5KCV6              	100.00%		H3EM23              	100.00%
                    	       		H3ENC7              	26.34%
                    	       		H3EQM1              	5.43%
Bootstrap support for Q5K8Q3 as seed ortholog is 68%.
Alternative seed ortholog is Q5KNV9 (26 bits away from this cluster)
Bootstrap support for Q5KCV6 as seed ortholog is 64%.
Alternative seed ortholog is Q5KNV9 (26 bits away from this cluster)
Bootstrap support for H3EM23 as seed ortholog is 99%.

Group of orthologs #267. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 P.pacificus:363

P0CO78              	100.00%		H3F3U2              	100.00%
Bootstrap support for P0CO78 as seed ortholog is 100%.
Bootstrap support for H3F3U2 as seed ortholog is 100%.

Group of orthologs #268. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.pacificus:136

Q5KCK2              	100.00%		H3FSB6              	100.00%
                    	       		H3FD08              	45.61%
                    	       		H3DRR9              	40.94%
                    	       		H3FD55              	34.47%
Bootstrap support for Q5KCK2 as seed ortholog is 99%.
Bootstrap support for H3FSB6 as seed ortholog is 98%.

Group of orthologs #269. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:361

Q5KB65              	100.00%		H3DWU8              	100.00%
                    	       		H3EN86              	9.38%
Bootstrap support for Q5KB65 as seed ortholog is 99%.
Bootstrap support for H3DWU8 as seed ortholog is 100%.

Group of orthologs #270. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 P.pacificus:361

Q5K8Z3              	100.00%		A6YM72              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for A6YM72 as seed ortholog is 100%.

Group of orthologs #271. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 P.pacificus:361

P0CP20              	100.00%		H3EKI7              	100.00%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for H3EKI7 as seed ortholog is 100%.

Group of orthologs #272. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.pacificus:10

Q5KI86              	100.00%		H3FS86              	100.00%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for H3FS86 as seed ortholog is 63%.
Alternative seed ortholog is H3EMV5 (10 bits away from this cluster)

Group of orthologs #273. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.pacificus:359

P0CR86              	100.00%		H3DU57              	100.00%
Bootstrap support for P0CR86 as seed ortholog is 100%.
Bootstrap support for H3DU57 as seed ortholog is 100%.

Group of orthologs #274. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.pacificus:359

Q5KID7              	100.00%		H3FRJ5              	100.00%
Bootstrap support for Q5KID7 as seed ortholog is 100%.
Bootstrap support for H3FRJ5 as seed ortholog is 100%.

Group of orthologs #275. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 P.pacificus:358

Q5KNU1              	100.00%		H3EWD4              	100.00%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for H3EWD4 as seed ortholog is 100%.

Group of orthologs #276. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 P.pacificus:357

P0CM38              	100.00%		H3EGL3              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for H3EGL3 as seed ortholog is 100%.

Group of orthologs #277. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 P.pacificus:357

Q5KBB1              	100.00%		H3F5L5              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for H3F5L5 as seed ortholog is 100%.

Group of orthologs #278. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 P.pacificus:220

Q5KC30              	100.00%		H3E5A4              	100.00%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for H3E5A4 as seed ortholog is 100%.

Group of orthologs #279. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.pacificus:101

Q5KDK0              	100.00%		H3EUT9              	100.00%
Bootstrap support for Q5KDK0 as seed ortholog is 100%.
Bootstrap support for H3EUT9 as seed ortholog is 97%.

Group of orthologs #280. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.pacificus:61

Q5KKV1              	100.00%		H3F4Y1              	100.00%
Bootstrap support for Q5KKV1 as seed ortholog is 99%.
Bootstrap support for H3F4Y1 as seed ortholog is 97%.

Group of orthologs #281. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:133 P.pacificus:146

Q5K9Z4              	100.00%		H3FT65              	100.00%
Bootstrap support for Q5K9Z4 as seed ortholog is 99%.
Bootstrap support for H3FT65 as seed ortholog is 99%.

Group of orthologs #282. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 P.pacificus:356

Q5KP83              	100.00%		H3FUS1              	100.00%
Bootstrap support for Q5KP83 as seed ortholog is 100%.
Bootstrap support for H3FUS1 as seed ortholog is 100%.

Group of orthologs #283. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.pacificus:104

P0CP02              	100.00%		H3F4Q2              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for H3F4Q2 as seed ortholog is 98%.

Group of orthologs #284. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.pacificus:350

Q5KH01              	100.00%		H3E9S7              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for H3E9S7 as seed ortholog is 100%.

Group of orthologs #285. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 P.pacificus:350

Q5KPR1              	100.00%		H3E836              	100.00%
Bootstrap support for Q5KPR1 as seed ortholog is 100%.
Bootstrap support for H3E836 as seed ortholog is 100%.

Group of orthologs #286. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.pacificus:49

Q5KJV0              	100.00%		H3EJX5              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 99%.
Bootstrap support for H3EJX5 as seed ortholog is 88%.

Group of orthologs #287. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 P.pacificus:349

Q5KEV1              	100.00%		H3F510              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for H3F510 as seed ortholog is 100%.

Group of orthologs #288. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.pacificus:231

Q5KJJ1              	100.00%		H3FEI1              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for H3FEI1 as seed ortholog is 99%.

Group of orthologs #289. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.pacificus:98

Q5KEJ4              	100.00%		H3DSJ3              	100.00%
                    	       		H3DSG1              	65.34%
                    	       		H3DSJ5              	60.86%
                    	       		H3DSG4              	33.50%
                    	       		H3FGZ8              	15.00%
                    	       		H3G1B5              	10.91%
                    	       		H3FNA8              	7.79%
Bootstrap support for Q5KEJ4 as seed ortholog is 100%.
Bootstrap support for H3DSJ3 as seed ortholog is 96%.

Group of orthologs #290. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.pacificus:95

P0CP68              	100.00%		H3FY22              	100.00%
                    	       		H3FY20              	23.49%
Bootstrap support for P0CP68 as seed ortholog is 94%.
Bootstrap support for H3FY22 as seed ortholog is 99%.

Group of orthologs #291. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.pacificus:348

P0CS70              	100.00%		H3E0W6              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for H3E0W6 as seed ortholog is 100%.

Group of orthologs #292. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.pacificus:67

P0CR40              	100.00%		H3EUU5              	100.00%
Bootstrap support for P0CR40 as seed ortholog is 44%.
Alternative seed ortholog is Q5K7X0 (32 bits away from this cluster)
Bootstrap support for H3EUU5 as seed ortholog is 95%.

Group of orthologs #293. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.pacificus:348

Q5KH62              	100.00%		H3EM65              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for H3EM65 as seed ortholog is 100%.

Group of orthologs #294. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.pacificus:348

P0CM24              	100.00%		H3EZ06              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for H3EZ06 as seed ortholog is 100%.

Group of orthologs #295. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 P.pacificus:137

P0CL92              	100.00%		H3EX67              	100.00%
Bootstrap support for P0CL92 as seed ortholog is 100%.
Bootstrap support for H3EX67 as seed ortholog is 99%.

Group of orthologs #296. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 P.pacificus:214

Q5KJE3              	100.00%		H3EWQ1              	100.00%
Bootstrap support for Q5KJE3 as seed ortholog is 100%.
Bootstrap support for H3EWQ1 as seed ortholog is 100%.

Group of orthologs #297. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 P.pacificus:345

P0CO58              	100.00%		H3EZQ6              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for H3EZQ6 as seed ortholog is 100%.

Group of orthologs #298. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 P.pacificus:344

Q5KI46              	100.00%		H3EGW9              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for H3EGW9 as seed ortholog is 100%.

Group of orthologs #299. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 P.pacificus:344

P0CP90              	100.00%		H3G154              	100.00%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for H3G154 as seed ortholog is 100%.

Group of orthologs #300. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 P.pacificus:340

Q5KEJ6              	100.00%		H3FJM0              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for H3FJM0 as seed ortholog is 100%.

Group of orthologs #301. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.pacificus:215

Q5KHS3              	100.00%		H3E3C8              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 99%.
Bootstrap support for H3E3C8 as seed ortholog is 100%.

Group of orthologs #302. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.pacificus:93

Q5KCX9              	100.00%		H3EKI2              	100.00%
                    	       		H3EZP3              	20.04%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for H3EKI2 as seed ortholog is 96%.

Group of orthologs #303. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.pacificus:60

Q5KCC8              	100.00%		H3DTM0              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for H3DTM0 as seed ortholog is 90%.

Group of orthologs #304. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 P.pacificus:337

Q5K952              	100.00%		H3F5G0              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for H3F5G0 as seed ortholog is 100%.

Group of orthologs #305. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.pacificus:18

Q5KAD7              	100.00%		H3EH02              	100.00%
                    	       		H3FQ02              	23.40%
Bootstrap support for Q5KAD7 as seed ortholog is 98%.
Bootstrap support for H3EH02 as seed ortholog is 71%.
Alternative seed ortholog is H3FHB8 (18 bits away from this cluster)

Group of orthologs #306. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 P.pacificus:335

Q5KDR3              	100.00%		H3EUS9              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for H3EUS9 as seed ortholog is 100%.

Group of orthologs #307. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 P.pacificus:334

Q5KKQ4              	100.00%		H3EQN8              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for H3EQN8 as seed ortholog is 100%.

Group of orthologs #308. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 P.pacificus:334

Q5KKG6              	100.00%		H3G361              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for H3G361 as seed ortholog is 100%.

Group of orthologs #309. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.pacificus:333

Q5K7X5              	100.00%		H3E9Y7              	100.00%
Q5K826              	49.65%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for H3E9Y7 as seed ortholog is 100%.

Group of orthologs #310. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 P.pacificus:73

Q5KLK8              	100.00%		H3F5H0              	100.00%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for H3F5H0 as seed ortholog is 87%.

Group of orthologs #311. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.pacificus:115

Q5KLS5              	100.00%		H3EDN6              	100.00%
                    	       		H3EYA9              	20.78%
Bootstrap support for Q5KLS5 as seed ortholog is 100%.
Bootstrap support for H3EDN6 as seed ortholog is 97%.

Group of orthologs #312. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 P.pacificus:161

Q5KAT1              	100.00%		H3DS31              	100.00%
Q5KAU3              	100.00%		H3EHZ3              	6.24%
Bootstrap support for Q5KAT1 as seed ortholog is 100%.
Bootstrap support for Q5KAU3 as seed ortholog is 100%.
Bootstrap support for H3DS31 as seed ortholog is 99%.

Group of orthologs #313. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 P.pacificus:331

Q5KCI3              	100.00%		H3EFR4              	100.00%
Bootstrap support for Q5KCI3 as seed ortholog is 100%.
Bootstrap support for H3EFR4 as seed ortholog is 100%.

Group of orthologs #314. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.pacificus:272

Q5KDL9              	100.00%		H3FCC2              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 89%.
Bootstrap support for H3FCC2 as seed ortholog is 100%.

Group of orthologs #315. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 P.pacificus:225

Q5KC09              	100.00%		H3F6N6              	100.00%
                    	       		H3FEK0              	28.79%
Bootstrap support for Q5KC09 as seed ortholog is 100%.
Bootstrap support for H3F6N6 as seed ortholog is 100%.

Group of orthologs #316. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 P.pacificus:149

Q5KMF5              	100.00%		H3E8U2              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for H3E8U2 as seed ortholog is 100%.

Group of orthologs #317. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 P.pacificus:328

Q5KHT1              	100.00%		H3E5S2              	100.00%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for H3E5S2 as seed ortholog is 100%.

Group of orthologs #318. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.pacificus:180

P0CR06              	100.00%		H3EPC2              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 99%.
Bootstrap support for H3EPC2 as seed ortholog is 99%.

Group of orthologs #319. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.pacificus:193

Q5KL60              	100.00%		H3E9L3              	100.00%
                    	       		H3FPD1              	46.19%
                    	       		H3E7Y5              	45.61%
                    	       		H3E981              	19.52%
Bootstrap support for Q5KL60 as seed ortholog is 99%.
Bootstrap support for H3E9L3 as seed ortholog is 99%.

Group of orthologs #320. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.pacificus:327

Q5KKN8              	100.00%		H3EZU7              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for H3EZU7 as seed ortholog is 100%.

Group of orthologs #321. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.pacificus:103

Q5K761              	100.00%		H3FBV5              	100.00%
                    	       		H3FUV5              	49.32%
                    	       		H3DSH8              	9.91%
Bootstrap support for Q5K761 as seed ortholog is 99%.
Bootstrap support for H3FBV5 as seed ortholog is 99%.

Group of orthologs #322. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.pacificus:326

Q5KH75              	100.00%		H3EFG9              	100.00%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for H3EFG9 as seed ortholog is 100%.

Group of orthologs #323. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.pacificus:325

P0CS12              	100.00%		H3EFC1              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for H3EFC1 as seed ortholog is 100%.

Group of orthologs #324. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:51 P.pacificus:155

Q5KC86              	100.00%		H3FK05              	100.00%
Bootstrap support for Q5KC86 as seed ortholog is 99%.
Bootstrap support for H3FK05 as seed ortholog is 100%.

Group of orthologs #325. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 P.pacificus:324

Q5K7W5              	100.00%		H3F6P7              	100.00%
Bootstrap support for Q5K7W5 as seed ortholog is 100%.
Bootstrap support for H3F6P7 as seed ortholog is 100%.

Group of orthologs #326. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:8

P0CM16              	100.00%		H3E6Q9              	100.00%
Bootstrap support for P0CM16 as seed ortholog is 99%.
Bootstrap support for H3E6Q9 as seed ortholog is 68%.
Alternative seed ortholog is H3EPN0 (8 bits away from this cluster)

Group of orthologs #327. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 P.pacificus:322

Q5KMM8              	100.00%		H3F6X8              	100.00%
Bootstrap support for Q5KMM8 as seed ortholog is 100%.
Bootstrap support for H3F6X8 as seed ortholog is 100%.

Group of orthologs #328. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 P.pacificus:321

Q5K8Q9              	100.00%		H3F1N6              	100.00%
Q5KN82              	14.43%		
Bootstrap support for Q5K8Q9 as seed ortholog is 100%.
Bootstrap support for H3F1N6 as seed ortholog is 100%.

Group of orthologs #329. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 P.pacificus:321

Q5KIH5              	100.00%		H3DTJ9              	100.00%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for H3DTJ9 as seed ortholog is 100%.

Group of orthologs #330. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:62

Q5KI66              	100.00%		H3DWR7              	100.00%
                    	       		H3FHE5              	11.41%
Bootstrap support for Q5KI66 as seed ortholog is 99%.
Bootstrap support for H3DWR7 as seed ortholog is 97%.

Group of orthologs #331. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.pacificus:320

Q5KJC6              	100.00%		H3FWE3              	100.00%
                    	       		H3EQ11              	7.84%
Bootstrap support for Q5KJC6 as seed ortholog is 99%.
Bootstrap support for H3FWE3 as seed ortholog is 100%.

Group of orthologs #332. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.pacificus:320

P0CP50              	100.00%		H3G1W7              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for H3G1W7 as seed ortholog is 100%.

Group of orthologs #333. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 P.pacificus:319

Q5KQ04              	100.00%		H3EZZ4              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for H3EZZ4 as seed ortholog is 100%.

Group of orthologs #334. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.pacificus:225

Q5KGN7              	100.00%		H3DWE6              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for H3DWE6 as seed ortholog is 100%.

Group of orthologs #335. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.pacificus:243

P0CS36              	100.00%		H3EHS6              	100.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for H3EHS6 as seed ortholog is 100%.

Group of orthologs #336. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.pacificus:318

Q5KA97              	100.00%		H3EES7              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for H3EES7 as seed ortholog is 100%.

Group of orthologs #337. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.pacificus:317

Q5KGV7              	100.00%		H3EHD5              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for H3EHD5 as seed ortholog is 100%.

Group of orthologs #338. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.pacificus:171

P0CQ90              	100.00%		H3EZZ8              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for H3EZZ8 as seed ortholog is 99%.

Group of orthologs #339. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.pacificus:316

Q5KI17              	100.00%		H3DTH9              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for H3DTH9 as seed ortholog is 100%.

Group of orthologs #340. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.pacificus:314

Q5KHZ2              	100.00%		H3ERI6              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for H3ERI6 as seed ortholog is 100%.

Group of orthologs #341. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.pacificus:312

Q5KHU9              	100.00%		H3EWP6              	100.00%
Bootstrap support for Q5KHU9 as seed ortholog is 100%.
Bootstrap support for H3EWP6 as seed ortholog is 100%.

Group of orthologs #342. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 P.pacificus:46

Q5KMG1              	100.00%		H3DUA8              	100.00%
Q5K8R8              	27.78%		H3EWI1              	8.71%
                    	       		H3F327              	8.08%
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for H3DUA8 as seed ortholog is 83%.

Group of orthologs #343. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:93

Q5K8I9              	100.00%		H3DT09              	100.00%
Bootstrap support for Q5K8I9 as seed ortholog is 99%.
Bootstrap support for H3DT09 as seed ortholog is 99%.

Group of orthologs #344. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 P.pacificus:311

Q5K9N8              	100.00%		H3EW06              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for H3EW06 as seed ortholog is 100%.

Group of orthologs #345. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.pacificus:311

Q5KIM3              	100.00%		H3FWD8              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for H3FWD8 as seed ortholog is 100%.

Group of orthologs #346. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.pacificus:310

P0CQ60              	100.00%		H3FUR8              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for H3FUR8 as seed ortholog is 100%.

Group of orthologs #347. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.pacificus:309

Q5KG72              	100.00%		H3DU01              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for H3DU01 as seed ortholog is 100%.

Group of orthologs #348. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.pacificus:309

Q5KHS1              	100.00%		H3EW75              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for H3EW75 as seed ortholog is 100%.

Group of orthologs #349. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.pacificus:309

Q5K7N9              	100.00%		H3FT97              	100.00%
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for H3FT97 as seed ortholog is 100%.

Group of orthologs #350. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.pacificus:45

Q5KNQ9              	100.00%		H3FMR6              	100.00%
Bootstrap support for Q5KNQ9 as seed ortholog is 99%.
Bootstrap support for H3FMR6 as seed ortholog is 88%.

Group of orthologs #351. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.pacificus:306

P0CR56              	100.00%		H3ET94              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for H3ET94 as seed ortholog is 100%.

Group of orthologs #352. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 P.pacificus:304

Q5KB64              	100.00%		H3DWV2              	100.00%
Bootstrap support for Q5KB64 as seed ortholog is 100%.
Bootstrap support for H3DWV2 as seed ortholog is 100%.

Group of orthologs #353. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.pacificus:39

Q5KMR6              	100.00%		H3F550              	100.00%
Bootstrap support for Q5KMR6 as seed ortholog is 99%.
Bootstrap support for H3F550 as seed ortholog is 91%.

Group of orthologs #354. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.pacificus:302

P0CQ58              	100.00%		H3F9N6              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for H3F9N6 as seed ortholog is 100%.

Group of orthologs #355. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.pacificus:302

Q5KJG7              	100.00%		H3FVW8              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for H3FVW8 as seed ortholog is 100%.

Group of orthologs #356. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.pacificus:302

Q5KI89              	100.00%		H3FZC8              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for H3FZC8 as seed ortholog is 100%.

Group of orthologs #357. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.pacificus:301

Q5KFQ5              	100.00%		H3DYP7              	100.00%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for H3DYP7 as seed ortholog is 100%.

Group of orthologs #358. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.pacificus:300

Q5KAX4              	100.00%		H3EFZ3              	100.00%
Bootstrap support for Q5KAX4 as seed ortholog is 100%.
Bootstrap support for H3EFZ3 as seed ortholog is 100%.

Group of orthologs #359. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.pacificus:14

Q5KDP3              	100.00%		H3FEX5              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for H3FEX5 as seed ortholog is 62%.
Alternative seed ortholog is H3G4M8 (14 bits away from this cluster)

Group of orthologs #360. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 P.pacificus:89

Q5KJ20              	100.00%		H3FG33              	100.00%
                    	       		H3DYB7              	7.23%
Bootstrap support for Q5KJ20 as seed ortholog is 100%.
Bootstrap support for H3FG33 as seed ortholog is 97%.

Group of orthologs #361. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.pacificus:298

P0CR50              	100.00%		H3F4W2              	100.00%
Bootstrap support for P0CR50 as seed ortholog is 100%.
Bootstrap support for H3F4W2 as seed ortholog is 100%.

Group of orthologs #362. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.pacificus:298

Q5KPZ1              	100.00%		H3FQS7              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for H3FQS7 as seed ortholog is 100%.

Group of orthologs #363. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:113

Q5KLR7              	100.00%		H3G2M6              	100.00%
Bootstrap support for Q5KLR7 as seed ortholog is 90%.
Bootstrap support for H3G2M6 as seed ortholog is 99%.

Group of orthologs #364. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.pacificus:295

Q5KHF9              	100.00%		H3EGZ7              	100.00%
                    	       		H3FYK4              	47.83%
                    	       		H3FII0              	43.79%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for H3EGZ7 as seed ortholog is 100%.

Group of orthologs #365. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.pacificus:48

Q5KPS8              	100.00%		H3EWJ0              	100.00%
                    	       		H3EJE1              	5.77%
Bootstrap support for Q5KPS8 as seed ortholog is 100%.
Bootstrap support for H3EWJ0 as seed ortholog is 91%.

Group of orthologs #366. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.pacificus:295

Q5KBD0              	100.00%		H3DVD7              	100.00%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for H3DVD7 as seed ortholog is 100%.

Group of orthologs #367. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.pacificus:295

Q5KMA6              	100.00%		H3DRH8              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for H3DRH8 as seed ortholog is 100%.

Group of orthologs #368. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.pacificus:295

Q5KL14              	100.00%		H3F6P0              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for H3F6P0 as seed ortholog is 100%.

Group of orthologs #369. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.pacificus:200

Q5KJY8              	100.00%		H3EIG3              	100.00%
                    	       		H3F071              	36.66%
                    	       		H3ETF3              	25.12%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for H3EIG3 as seed ortholog is 100%.

Group of orthologs #370. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.pacificus:294

Q5KP89              	100.00%		H3DZQ6              	100.00%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for H3DZQ6 as seed ortholog is 100%.

Group of orthologs #371. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.pacificus:294

Q5KAX6              	100.00%		H3FFJ8              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for H3FFJ8 as seed ortholog is 100%.

Group of orthologs #372. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 P.pacificus:293

Q5K7P1              	100.00%		H3F5H4              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for H3F5H4 as seed ortholog is 100%.

Group of orthologs #373. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.pacificus:292

Q5KKR7              	100.00%		H3EV00              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for H3EV00 as seed ortholog is 100%.

Group of orthologs #374. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.pacificus:292

Q5KFZ3              	100.00%		H3F468              	100.00%
Bootstrap support for Q5KFZ3 as seed ortholog is 100%.
Bootstrap support for H3F468 as seed ortholog is 100%.

Group of orthologs #375. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.pacificus:292

Q5KI91              	100.00%		H3FC86              	100.00%
Bootstrap support for Q5KI91 as seed ortholog is 100%.
Bootstrap support for H3FC86 as seed ortholog is 100%.

Group of orthologs #376. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 P.pacificus:291

Q5KJU2              	100.00%		H3FJL1              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for H3FJL1 as seed ortholog is 100%.

Group of orthologs #377. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.pacificus:176

Q5KF69              	100.00%		H3EVK1              	100.00%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for H3EVK1 as seed ortholog is 100%.

Group of orthologs #378. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.pacificus:135

Q5K7W2              	100.00%		H3EEG8              	100.00%
Q5K7W1              	78.44%		
Bootstrap support for Q5K7W2 as seed ortholog is 100%.
Bootstrap support for H3EEG8 as seed ortholog is 99%.

Group of orthologs #379. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 P.pacificus:289

P0CQ08              	100.00%		H3DYU7              	100.00%
Bootstrap support for P0CQ08 as seed ortholog is 100%.
Bootstrap support for H3DYU7 as seed ortholog is 100%.

Group of orthologs #380. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.pacificus:135

Q5KLW0              	100.00%		H3FML8              	100.00%
                    	       		H3EET0              	20.23%
Bootstrap support for Q5KLW0 as seed ortholog is 100%.
Bootstrap support for H3FML8 as seed ortholog is 99%.

Group of orthologs #381. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.pacificus:287

Q5KAV3              	100.00%		H3DS58              	100.00%
Q5KAT4              	58.78%		H3DS59              	65.63%
Bootstrap support for Q5KAV3 as seed ortholog is 100%.
Bootstrap support for H3DS58 as seed ortholog is 100%.

Group of orthologs #382. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.pacificus:287

Q5K9E9              	100.00%		H3F8H8              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for H3F8H8 as seed ortholog is 100%.

Group of orthologs #383. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.pacificus:160

Q5K9V2              	100.00%		H3FMC6              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for H3FMC6 as seed ortholog is 99%.

Group of orthologs #384. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 P.pacificus:286

Q5KIR4              	100.00%		H3FAD9              	100.00%
Q5KGZ3              	34.24%		
Bootstrap support for Q5KIR4 as seed ortholog is 100%.
Bootstrap support for H3FAD9 as seed ortholog is 100%.

Group of orthologs #385. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 P.pacificus:143

Q5KGW0              	100.00%		H3EHB8              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for H3EHB8 as seed ortholog is 100%.

Group of orthologs #386. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 P.pacificus:168

P0CQ24              	100.00%		H3FY39              	100.00%
Bootstrap support for P0CQ24 as seed ortholog is 100%.
Bootstrap support for H3FY39 as seed ortholog is 100%.

Group of orthologs #387. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.pacificus:285

Q5KIS9              	100.00%		H3E9Z8              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for H3E9Z8 as seed ortholog is 100%.

Group of orthologs #388. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.pacificus:167

Q5KQ18              	100.00%		H3E639              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for H3E639 as seed ortholog is 100%.

Group of orthologs #389. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.pacificus:285

Q5KJI4              	100.00%		H3F8B7              	100.00%
Bootstrap support for Q5KJI4 as seed ortholog is 100%.
Bootstrap support for H3F8B7 as seed ortholog is 100%.

Group of orthologs #390. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:143

P0CR10              	100.00%		H3FRL8              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 69%.
Alternative seed ortholog is P0CQ86 (156 bits away from this cluster)
Bootstrap support for H3FRL8 as seed ortholog is 82%.

Group of orthologs #391. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.pacificus:285

P0CO52              	100.00%		H3G153              	100.00%
Bootstrap support for P0CO52 as seed ortholog is 100%.
Bootstrap support for H3G153 as seed ortholog is 100%.

Group of orthologs #392. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.pacificus:284

Q5KFS1              	100.00%		H3FA97              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 100%.
Bootstrap support for H3FA97 as seed ortholog is 100%.

Group of orthologs #393. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:124

P0CR02              	100.00%		H3FKM3              	100.00%
Bootstrap support for P0CR02 as seed ortholog is 100%.
Bootstrap support for H3FKM3 as seed ortholog is 99%.

Group of orthologs #394. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.pacificus:282

Q5K737              	100.00%		H3FVN7              	100.00%
Bootstrap support for Q5K737 as seed ortholog is 100%.
Bootstrap support for H3FVN7 as seed ortholog is 100%.

Group of orthologs #395. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.pacificus:223

Q5K9S7              	100.00%		H3FY37              	100.00%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for H3FY37 as seed ortholog is 100%.

Group of orthologs #396. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.pacificus:47

Q5KCA0              	100.00%		H3F367              	100.00%
Bootstrap support for Q5KCA0 as seed ortholog is 99%.
Bootstrap support for H3F367 as seed ortholog is 91%.

Group of orthologs #397. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.pacificus:195

Q5KIH7              	100.00%		H3F6Z4              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 99%.
Bootstrap support for H3F6Z4 as seed ortholog is 100%.

Group of orthologs #398. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:28

Q5K7H6              	100.00%		H3F9I0              	100.00%
                    	       		H3F2B5              	38.43%
                    	       		H3G107              	17.00%
Bootstrap support for Q5K7H6 as seed ortholog is 99%.
Bootstrap support for H3F9I0 as seed ortholog is 73%.
Alternative seed ortholog is H3EIU0 (28 bits away from this cluster)

Group of orthologs #399. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.pacificus:280

Q5KQ20              	100.00%		H3F9Y5              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for H3F9Y5 as seed ortholog is 100%.

Group of orthologs #400. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.pacificus:280

P0CP58              	100.00%		H3G1U5              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for H3G1U5 as seed ortholog is 100%.

Group of orthologs #401. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.pacificus:279

Q5K9D3              	100.00%		H3F484              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 100%.
Bootstrap support for H3F484 as seed ortholog is 100%.

Group of orthologs #402. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.pacificus:279

P0CN56              	100.00%		H3FGC2              	100.00%
Bootstrap support for P0CN56 as seed ortholog is 100%.
Bootstrap support for H3FGC2 as seed ortholog is 100%.

Group of orthologs #403. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:106

Q5K6Z2              	100.00%		H3FRL7              	100.00%
Bootstrap support for Q5K6Z2 as seed ortholog is 93%.
Bootstrap support for H3FRL7 as seed ortholog is 99%.

Group of orthologs #404. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.pacificus:57

Q5KDT4              	100.00%		H3DSF7              	100.00%
Q5KD75              	7.62%		
Bootstrap support for Q5KDT4 as seed ortholog is 99%.
Bootstrap support for H3DSF7 as seed ortholog is 93%.

Group of orthologs #405. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 P.pacificus:278

Q5KII4              	100.00%		H3E3I3              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for H3E3I3 as seed ortholog is 100%.

Group of orthologs #406. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.pacificus:277

Q5KK40              	100.00%		H3F9Y2              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for H3F9Y2 as seed ortholog is 100%.

Group of orthologs #407. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.pacificus:20

Q5KAN2              	100.00%		H3DT80              	100.00%
Bootstrap support for Q5KAN2 as seed ortholog is 87%.
Bootstrap support for H3DT80 as seed ortholog is 68%.
Alternative seed ortholog is H3DRT3 (20 bits away from this cluster)

Group of orthologs #408. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.pacificus:275

P0CO12              	100.00%		H3EDS5              	100.00%
Bootstrap support for P0CO12 as seed ortholog is 100%.
Bootstrap support for H3EDS5 as seed ortholog is 100%.

Group of orthologs #409. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.pacificus:274

Q5KIJ1              	100.00%		H3EYG7              	100.00%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for H3EYG7 as seed ortholog is 100%.

Group of orthologs #410. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 P.pacificus:273

Q5KQ48              	100.00%		H3EYJ5              	100.00%
Bootstrap support for Q5KQ48 as seed ortholog is 100%.
Bootstrap support for H3EYJ5 as seed ortholog is 100%.

Group of orthologs #411. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.pacificus:272

Q5K809              	100.00%		H3ESI3              	100.00%
Q5KNE6              	100.00%		H3F5D3              	100.00%
Bootstrap support for Q5K809 as seed ortholog is 100%.
Bootstrap support for Q5KNE6 as seed ortholog is 100%.
Bootstrap support for H3ESI3 as seed ortholog is 100%.
Bootstrap support for H3F5D3 as seed ortholog is 100%.

Group of orthologs #412. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.pacificus:272

Q5K950              	100.00%		H3EB65              	100.00%
Bootstrap support for Q5K950 as seed ortholog is 100%.
Bootstrap support for H3EB65 as seed ortholog is 100%.

Group of orthologs #413. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:119

Q5KQ09              	100.00%		H3G3J8              	100.00%
Q5KJA2              	100.00%		H3FPA0              	100.00%
Q5KCB5              	88.71%		H3F5U9              	28.99%
Q5KA14              	84.98%		
Q5KD25              	79.82%		
Q5KCH2              	71.38%		
Q5KDS2              	40.46%		
Q5KJA6              	39.04%		
Bootstrap support for Q5KQ09 as seed ortholog is 91%.
Bootstrap support for Q5KJA2 as seed ortholog is 65%.
Alternative seed ortholog is Q5KCC5 (59 bits away from this cluster)
Bootstrap support for H3G3J8 as seed ortholog is 98%.
Bootstrap support for H3FPA0 as seed ortholog is 97%.

Group of orthologs #414. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 P.pacificus:106

Q5KED7              	100.00%		H3EGJ6              	100.00%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for H3EGJ6 as seed ortholog is 99%.

Group of orthologs #415. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 P.pacificus:271

Q5KID8              	100.00%		H3FYP0              	100.00%
Bootstrap support for Q5KID8 as seed ortholog is 100%.
Bootstrap support for H3FYP0 as seed ortholog is 100%.

Group of orthologs #416. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:149

Q5KAZ7              	100.00%		H3DZP0              	100.00%
                    	       		H3DXN2              	56.19%
                    	       		H3G4Q5              	43.14%
                    	       		H3E734              	34.45%
                    	       		H3DX73              	30.77%
Bootstrap support for Q5KAZ7 as seed ortholog is 99%.
Bootstrap support for H3DZP0 as seed ortholog is 99%.

Group of orthologs #417. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.pacificus:270

Q5KFM4              	100.00%		H3FSV1              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for H3FSV1 as seed ortholog is 100%.

Group of orthologs #418. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.pacificus:130

Q5KGZ4              	100.00%		H3E665              	100.00%
Bootstrap support for Q5KGZ4 as seed ortholog is 99%.
Bootstrap support for H3E665 as seed ortholog is 100%.

Group of orthologs #419. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.pacificus:269

Q5KIV1              	100.00%		H3E9U4              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for H3E9U4 as seed ortholog is 100%.

Group of orthologs #420. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.pacificus:269

Q5K9Q6              	100.00%		H3ET00              	100.00%
Bootstrap support for Q5K9Q6 as seed ortholog is 100%.
Bootstrap support for H3ET00 as seed ortholog is 100%.

Group of orthologs #421. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 P.pacificus:268

Q5KC90              	100.00%		H3EKY6              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for H3EKY6 as seed ortholog is 100%.

Group of orthologs #422. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:120

Q5K9B8              	100.00%		H3EPP0              	100.00%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for H3EPP0 as seed ortholog is 100%.

Group of orthologs #423. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 P.pacificus:100

Q5K947              	100.00%		H3F686              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for H3F686 as seed ortholog is 99%.

Group of orthologs #424. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.pacificus:267

Q5KCD9              	100.00%		H3DUL7              	100.00%
Bootstrap support for Q5KCD9 as seed ortholog is 100%.
Bootstrap support for H3DUL7 as seed ortholog is 100%.

Group of orthologs #425. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.pacificus:267

Q5KC51              	100.00%		H3E640              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for H3E640 as seed ortholog is 100%.

Group of orthologs #426. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.pacificus:267

Q5KHA6              	100.00%		H3FQK8              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for H3FQK8 as seed ortholog is 100%.

Group of orthologs #427. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.pacificus:267

Q5KKK5              	100.00%		H3G2K1              	100.00%
Bootstrap support for Q5KKK5 as seed ortholog is 100%.
Bootstrap support for H3G2K1 as seed ortholog is 100%.

Group of orthologs #428. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.pacificus:266

Q5KG75              	100.00%		H3E031              	100.00%
                    	       		H3EV64              	13.84%
Bootstrap support for Q5KG75 as seed ortholog is 100%.
Bootstrap support for H3E031 as seed ortholog is 100%.

Group of orthologs #429. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.pacificus:266

Q5KJ97              	100.00%		H3E5D0              	100.00%
Bootstrap support for Q5KJ97 as seed ortholog is 100%.
Bootstrap support for H3E5D0 as seed ortholog is 100%.

Group of orthologs #430. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.pacificus:159

Q5KCS1              	100.00%		H3EBL4              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for H3EBL4 as seed ortholog is 100%.

Group of orthologs #431. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.pacificus:266

Q5KQ06              	100.00%		H3EEC1              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for H3EEC1 as seed ortholog is 100%.

Group of orthologs #432. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.pacificus:265

Q5KPC1              	100.00%		H3E0J0              	100.00%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for H3E0J0 as seed ortholog is 100%.

Group of orthologs #433. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.pacificus:265

Q5KFT1              	100.00%		H3FK17              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for H3FK17 as seed ortholog is 100%.

Group of orthologs #434. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 P.pacificus:264

P0CN42              	100.00%		H3E0H2              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for H3E0H2 as seed ortholog is 100%.

Group of orthologs #435. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 P.pacificus:264

Q5K8T6              	100.00%		H3EPL1              	100.00%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for H3EPL1 as seed ortholog is 100%.

Group of orthologs #436. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 P.pacificus:264

Q5KHK1              	100.00%		H3F8W9              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for H3F8W9 as seed ortholog is 100%.

Group of orthologs #437. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.pacificus:100

Q5K8J5              	100.00%		H3F427              	100.00%
                    	       		H3FR55              	40.03%
                    	       		H3EPC6              	6.94%
                    	       		H3FHY4              	6.65%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for H3F427 as seed ortholog is 99%.

Group of orthologs #438. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.pacificus:262

Q5KI12              	100.00%		H3ECJ3              	100.00%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for H3ECJ3 as seed ortholog is 100%.

Group of orthologs #439. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.pacificus:262

Q5KDC2              	100.00%		H3F652              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 99%.
Bootstrap support for H3F652 as seed ortholog is 100%.

Group of orthologs #440. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.pacificus:262

Q5KJZ3              	100.00%		H3F5W4              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 99%.
Bootstrap support for H3F5W4 as seed ortholog is 100%.

Group of orthologs #441. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 P.pacificus:260

Q5KEN3              	100.00%		H3FCJ8              	100.00%
                    	       		H3G0B6              	18.47%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for H3FCJ8 as seed ortholog is 100%.

Group of orthologs #442. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 P.pacificus:260

P0CN44              	100.00%		H3FK40              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for H3FK40 as seed ortholog is 100%.

Group of orthologs #443. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.pacificus:136

Q5KF72              	100.00%		H3EGL4              	100.00%
Bootstrap support for Q5KF72 as seed ortholog is 100%.
Bootstrap support for H3EGL4 as seed ortholog is 100%.

Group of orthologs #444. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.pacificus:259

Q5KH10              	100.00%		H3EWZ3              	100.00%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for H3EWZ3 as seed ortholog is 100%.

Group of orthologs #445. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.pacificus:259

Q5KQ95              	100.00%		H3FRR2              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 99%.
Bootstrap support for H3FRR2 as seed ortholog is 100%.

Group of orthologs #446. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:33 P.pacificus:258

Q5KIR0              	100.00%		H3G2J0              	100.00%
                    	       		H3E6T8              	11.43%
Bootstrap support for Q5KIR0 as seed ortholog is 80%.
Bootstrap support for H3G2J0 as seed ortholog is 100%.

Group of orthologs #447. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.pacificus:258

Q5KNI6              	100.00%		H3E664              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for H3E664 as seed ortholog is 100%.

Group of orthologs #448. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.pacificus:258

Q5KK62              	100.00%		H3EFS2              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for H3EFS2 as seed ortholog is 100%.

Group of orthologs #449. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.pacificus:258

Q5K9Y4              	100.00%		H3F9Y6              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for H3F9Y6 as seed ortholog is 100%.

Group of orthologs #450. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:63

Q5KGD8              	100.00%		H3FBQ4              	100.00%
Bootstrap support for Q5KGD8 as seed ortholog is 99%.
Bootstrap support for H3FBQ4 as seed ortholog is 96%.

Group of orthologs #451. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.pacificus:258

Q5K8H1              	100.00%		H3FVT6              	100.00%
Bootstrap support for Q5K8H1 as seed ortholog is 100%.
Bootstrap support for H3FVT6 as seed ortholog is 100%.

Group of orthologs #452. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.pacificus:123

Q5KC50              	100.00%		H3E835              	100.00%
                    	       		H3F653              	70.47%
Bootstrap support for Q5KC50 as seed ortholog is 100%.
Bootstrap support for H3E835 as seed ortholog is 100%.

Group of orthologs #453. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.pacificus:257

Q5KCK7              	100.00%		H3E0P5              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for H3E0P5 as seed ortholog is 100%.

Group of orthologs #454. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:4

Q5KII1              	100.00%		H3EFM5              	100.00%
Bootstrap support for Q5KII1 as seed ortholog is 95%.
Bootstrap support for H3EFM5 as seed ortholog is 46%.
Alternative seed ortholog is H3DVW2 (4 bits away from this cluster)

Group of orthologs #455. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.pacificus:257

P0CO48              	100.00%		H3ET86              	100.00%
Bootstrap support for P0CO48 as seed ortholog is 99%.
Bootstrap support for H3ET86 as seed ortholog is 100%.

Group of orthologs #456. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.pacificus:257

Q5K8C0              	100.00%		H3FDM4              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for H3FDM4 as seed ortholog is 100%.

Group of orthologs #457. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.pacificus:256

Q5K8Q5              	100.00%		H3FVL9              	100.00%
                    	       		H3F967              	23.21%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for H3FVL9 as seed ortholog is 100%.

Group of orthologs #458. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.pacificus:92

Q5K707              	100.00%		H3FJF5              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 100%.
Bootstrap support for H3FJF5 as seed ortholog is 99%.

Group of orthologs #459. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:39 P.pacificus:255

Q5KCR3              	100.00%		H3DYR1              	100.00%
Bootstrap support for Q5KCR3 as seed ortholog is 59%.
Alternative seed ortholog is Q5KP65 (39 bits away from this cluster)
Bootstrap support for H3DYR1 as seed ortholog is 100%.

Group of orthologs #460. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:161

Q5KKX6              	100.00%		H3FN48              	100.00%
Bootstrap support for Q5KKX6 as seed ortholog is 99%.
Bootstrap support for H3FN48 as seed ortholog is 99%.

Group of orthologs #461. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 P.pacificus:254

Q5KIN9              	100.00%		H3EPK1              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for H3EPK1 as seed ortholog is 100%.

Group of orthologs #462. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 P.pacificus:254

Q5KJ40              	100.00%		H3EPM7              	100.00%
Bootstrap support for Q5KJ40 as seed ortholog is 100%.
Bootstrap support for H3EPM7 as seed ortholog is 100%.

Group of orthologs #463. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 P.pacificus:254

Q5K7Z7              	100.00%		H3F895              	100.00%
Bootstrap support for Q5K7Z7 as seed ortholog is 100%.
Bootstrap support for H3F895 as seed ortholog is 100%.

Group of orthologs #464. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.pacificus:83

Q5K705              	100.00%		H3FSE2              	100.00%
                    	       		H3EK93              	36.79%
                    	       		H3ENE1              	24.62%
                    	       		H3EJF3              	23.59%
                    	       		H3EYK8              	21.92%
                    	       		H3E7S9              	8.97%
Bootstrap support for Q5K705 as seed ortholog is 98%.
Bootstrap support for H3FSE2 as seed ortholog is 95%.

Group of orthologs #465. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.pacificus:253

Q5KP54              	100.00%		H3E9T2              	100.00%
Bootstrap support for Q5KP54 as seed ortholog is 100%.
Bootstrap support for H3E9T2 as seed ortholog is 100%.

Group of orthologs #466. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.pacificus:253

Q5KFB7              	100.00%		H3EYF8              	100.00%
Bootstrap support for Q5KFB7 as seed ortholog is 100%.
Bootstrap support for H3EYF8 as seed ortholog is 100%.

Group of orthologs #467. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.pacificus:253

Q5KDJ7              	100.00%		H3F8K4              	100.00%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for H3F8K4 as seed ortholog is 100%.

Group of orthologs #468. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.pacificus:253

Q5K9F7              	100.00%		H3FMZ4              	100.00%
Bootstrap support for Q5K9F7 as seed ortholog is 100%.
Bootstrap support for H3FMZ4 as seed ortholog is 100%.

Group of orthologs #469. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.pacificus:253

Q5K8Z6              	100.00%		H3FY94              	100.00%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for H3FY94 as seed ortholog is 100%.

Group of orthologs #470. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.pacificus:19

Q5KG89              	100.00%		H3DXC5              	100.00%
P0CN96              	5.18%		
Bootstrap support for Q5KG89 as seed ortholog is 100%.
Bootstrap support for H3DXC5 as seed ortholog is 70%.
Alternative seed ortholog is H3EEI3 (19 bits away from this cluster)

Group of orthologs #471. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.pacificus:252

Q5KB98              	100.00%		H3G3T5              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for H3G3T5 as seed ortholog is 100%.

Group of orthologs #472. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.pacificus:250

Q5KHY1              	100.00%		H3E5A0              	100.00%
                    	       		H3FZC2              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for H3E5A0 as seed ortholog is 100%.
Bootstrap support for H3FZC2 as seed ortholog is 100%.

Group of orthologs #473. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:67

Q5KLQ6              	100.00%		H3FEI7              	100.00%
                    	       		H3EAH9              	12.23%
Bootstrap support for Q5KLQ6 as seed ortholog is 99%.
Bootstrap support for H3FEI7 as seed ortholog is 96%.

Group of orthologs #474. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.pacificus:250

Q5KLK7              	100.00%		H3DWP9              	100.00%
Bootstrap support for Q5KLK7 as seed ortholog is 100%.
Bootstrap support for H3DWP9 as seed ortholog is 100%.

Group of orthologs #475. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.pacificus:250

Q5KEL8              	100.00%		H3E9L4              	100.00%
Bootstrap support for Q5KEL8 as seed ortholog is 100%.
Bootstrap support for H3E9L4 as seed ortholog is 100%.

Group of orthologs #476. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.pacificus:250

Q5KML3              	100.00%		H3EFD0              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for H3EFD0 as seed ortholog is 100%.

Group of orthologs #477. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.pacificus:250

Q5KFC5              	100.00%		H3F402              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for H3F402 as seed ortholog is 100%.

Group of orthologs #478. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.pacificus:182

Q5KG73              	100.00%		H3DSL3              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 99%.
Bootstrap support for H3DSL3 as seed ortholog is 100%.

Group of orthologs #479. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 P.pacificus:120

Q5KQ94              	100.00%		H3FGC9              	100.00%
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for H3FGC9 as seed ortholog is 99%.

Group of orthologs #480. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.pacificus:141

Q5KIW0              	100.00%		H3EA21              	100.00%
Q5KJX7              	100.00%		H3F949              	100.00%
                    	       		H3F453              	20.58%
                    	       		H3ES70              	18.27%
                    	       		H3ET16              	10.22%
Bootstrap support for Q5KIW0 as seed ortholog is 99%.
Bootstrap support for Q5KJX7 as seed ortholog is 98%.
Bootstrap support for H3EA21 as seed ortholog is 99%.
Bootstrap support for H3F949 as seed ortholog is 99%.

Group of orthologs #481. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.pacificus:247

Q5K9A0              	100.00%		H3EFR5              	100.00%
Q5KEE6              	11.92%		
Bootstrap support for Q5K9A0 as seed ortholog is 100%.
Bootstrap support for H3EFR5 as seed ortholog is 100%.

Group of orthologs #482. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.pacificus:247

Q5KAQ7              	100.00%		H3EEN7              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for H3EEN7 as seed ortholog is 100%.

Group of orthologs #483. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.pacificus:247

P0CS80              	100.00%		H3FJ87              	100.00%
Bootstrap support for P0CS80 as seed ortholog is 100%.
Bootstrap support for H3FJ87 as seed ortholog is 100%.

Group of orthologs #484. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.pacificus:247

Q5KIE7              	100.00%		H3FHA1              	100.00%
Bootstrap support for Q5KIE7 as seed ortholog is 100%.
Bootstrap support for H3FHA1 as seed ortholog is 100%.

Group of orthologs #485. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.pacificus:246

Q5KM38              	100.00%		H3DYR7              	100.00%
Bootstrap support for Q5KM38 as seed ortholog is 100%.
Bootstrap support for H3DYR7 as seed ortholog is 100%.

Group of orthologs #486. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.pacificus:93

Q5KEF4              	100.00%		H3FQK0              	100.00%
Bootstrap support for Q5KEF4 as seed ortholog is 100%.
Bootstrap support for H3FQK0 as seed ortholog is 92%.

Group of orthologs #487. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.pacificus:8

Q5KLJ0              	100.00%		H3FNB5              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for H3FNB5 as seed ortholog is 82%.

Group of orthologs #488. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 P.pacificus:245

P0CS38              	100.00%		H3DWG4              	100.00%
Bootstrap support for P0CS38 as seed ortholog is 100%.
Bootstrap support for H3DWG4 as seed ortholog is 100%.

Group of orthologs #489. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:9 P.pacificus:244

Q5KEL5              	100.00%		H3FNU2              	100.00%
Q5KD15              	92.01%		
Q5K981              	58.61%		
Bootstrap support for Q5KEL5 as seed ortholog is 60%.
Alternative seed ortholog is Q5KPZ2 (9 bits away from this cluster)
Bootstrap support for H3FNU2 as seed ortholog is 100%.

Group of orthologs #490. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:28

P0CO04              	100.00%		H3EZY8              	100.00%
Q5KMT3              	36.36%		
Bootstrap support for P0CO04 as seed ortholog is 99%.
Bootstrap support for H3EZY8 as seed ortholog is 95%.

Group of orthologs #491. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.pacificus:244

Q5KKJ5              	100.00%		H3F5A4              	100.00%
Q5KF32              	25.00%		
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for H3F5A4 as seed ortholog is 100%.

Group of orthologs #492. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.pacificus:244

Q5KEZ6              	100.00%		H3FKD0              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for H3FKD0 as seed ortholog is 100%.

Group of orthologs #493. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:47

P0CQ92              	100.00%		H3E702              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for H3E702 as seed ortholog is 91%.

Group of orthologs #494. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.pacificus:55

Q5KNV3              	100.00%		H3DRX8              	100.00%
Bootstrap support for Q5KNV3 as seed ortholog is 100%.
Bootstrap support for H3DRX8 as seed ortholog is 84%.

Group of orthologs #495. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.pacificus:120

P0CP78              	100.00%		H3F8I0              	100.00%
Bootstrap support for P0CP78 as seed ortholog is 98%.
Bootstrap support for H3F8I0 as seed ortholog is 100%.

Group of orthologs #496. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.pacificus:243

Q5KDP4              	100.00%		H3FRS7              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for H3FRS7 as seed ortholog is 100%.

Group of orthologs #497. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.pacificus:86

Q5KJC9              	100.00%		H3F4S2              	100.00%
                    	       		H3F2M3              	19.10%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for H3F4S2 as seed ortholog is 99%.

Group of orthologs #498. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.pacificus:242

Q5KJB8              	100.00%		H3DST5              	100.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for H3DST5 as seed ortholog is 100%.

Group of orthologs #499. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.pacificus:242

Q5KML5              	100.00%		H3DU58              	100.00%
Bootstrap support for Q5KML5 as seed ortholog is 100%.
Bootstrap support for H3DU58 as seed ortholog is 100%.

Group of orthologs #500. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:242

Q5KA78              	100.00%		H3EVZ7              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 93%.
Bootstrap support for H3EVZ7 as seed ortholog is 100%.

Group of orthologs #501. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.pacificus:242

Q5K8A1              	100.00%		H3FZP6              	100.00%
Bootstrap support for Q5K8A1 as seed ortholog is 100%.
Bootstrap support for H3FZP6 as seed ortholog is 100%.

Group of orthologs #502. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.pacificus:83

Q5KJZ5              	100.00%		H3G127              	100.00%
Bootstrap support for Q5KJZ5 as seed ortholog is 100%.
Bootstrap support for H3G127 as seed ortholog is 92%.

Group of orthologs #503. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 P.pacificus:241

Q5KBS2              	100.00%		H3EAQ2              	100.00%
                    	       		H3F6E4              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for H3EAQ2 as seed ortholog is 100%.
Bootstrap support for H3F6E4 as seed ortholog is 100%.

Group of orthologs #504. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:114

P0CO42              	100.00%		H3F5G9              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 99%.
Bootstrap support for H3F5G9 as seed ortholog is 99%.

Group of orthologs #505. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 P.pacificus:239

Q5KKU8              	100.00%		H3DZA6              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for H3DZA6 as seed ortholog is 100%.

Group of orthologs #506. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:127

Q5K7V8              	100.00%		H3DZM8              	100.00%
Bootstrap support for Q5K7V8 as seed ortholog is 68%.
Alternative seed ortholog is Q5KQ46 (119 bits away from this cluster)
Bootstrap support for H3DZM8 as seed ortholog is 99%.

Group of orthologs #507. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.pacificus:238

Q5K7Y2              	100.00%		H3EGQ2              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for H3EGQ2 as seed ortholog is 100%.

Group of orthologs #508. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.pacificus:238

Q5KNJ8              	100.00%		H3F2D8              	100.00%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for H3F2D8 as seed ortholog is 100%.

Group of orthologs #509. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.pacificus:238

Q5KPZ5              	100.00%		H3FK56              	100.00%
Bootstrap support for Q5KPZ5 as seed ortholog is 100%.
Bootstrap support for H3FK56 as seed ortholog is 100%.

Group of orthologs #510. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.pacificus:237

Q5KCE8              	100.00%		H3F5F3              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 89%.
Bootstrap support for H3F5F3 as seed ortholog is 100%.

Group of orthologs #511. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.pacificus:236

Q5KDL7              	100.00%		H3EA33              	100.00%
Bootstrap support for Q5KDL7 as seed ortholog is 100%.
Bootstrap support for H3EA33 as seed ortholog is 100%.

Group of orthologs #512. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.pacificus:236

Q5KKR0              	100.00%		H3ERC5              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for H3ERC5 as seed ortholog is 100%.

Group of orthologs #513. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.pacificus:97

Q5K833              	100.00%		H3E7D3              	100.00%
Q5K840              	77.71%		H3EE16              	35.69%
Bootstrap support for Q5K833 as seed ortholog is 99%.
Bootstrap support for H3E7D3 as seed ortholog is 99%.

Group of orthologs #514. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.pacificus:235

Q5KBW9              	100.00%		H3FHA6              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for H3FHA6 as seed ortholog is 100%.

Group of orthologs #515. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.pacificus:235

Q5KIG6              	100.00%		H3FVS3              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for H3FVS3 as seed ortholog is 100%.

Group of orthologs #516. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.pacificus:234

Q5KEW8              	100.00%		H3EGN2              	100.00%
Q5KD36              	38.03%		
Q5KDR9              	37.56%		
Bootstrap support for Q5KEW8 as seed ortholog is 100%.
Bootstrap support for H3EGN2 as seed ortholog is 100%.

Group of orthologs #517. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.pacificus:234

Q5KFV6              	100.00%		H3EKK9              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for H3EKK9 as seed ortholog is 100%.

Group of orthologs #518. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.pacificus:234

Q5K757              	100.00%		H3F4Y0              	100.00%
Bootstrap support for Q5K757 as seed ortholog is 100%.
Bootstrap support for H3F4Y0 as seed ortholog is 100%.

Group of orthologs #519. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.pacificus:234

Q5KEX2              	100.00%		H3FD99              	100.00%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for H3FD99 as seed ortholog is 100%.

Group of orthologs #520. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.pacificus:97

Q5KH15              	100.00%		H3FC46              	100.00%
Bootstrap support for Q5KH15 as seed ortholog is 99%.
Bootstrap support for H3FC46 as seed ortholog is 99%.

Group of orthologs #521. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.pacificus:234

Q5KLA2              	100.00%		H3FNC7              	100.00%
Bootstrap support for Q5KLA2 as seed ortholog is 100%.
Bootstrap support for H3FNC7 as seed ortholog is 100%.

Group of orthologs #522. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:51

Q5KG79              	100.00%		H3DWZ0              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 93%.
Bootstrap support for H3DWZ0 as seed ortholog is 89%.

Group of orthologs #523. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 P.pacificus:233

Q5KEY4              	100.00%		H3E629              	100.00%
Bootstrap support for Q5KEY4 as seed ortholog is 100%.
Bootstrap support for H3E629 as seed ortholog is 100%.

Group of orthologs #524. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 P.pacificus:233

Q5KLM1              	100.00%		H3F834              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 100%.
Bootstrap support for H3F834 as seed ortholog is 100%.

Group of orthologs #525. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.pacificus:232

Q5KL66              	100.00%		H3EZR4              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for H3EZR4 as seed ortholog is 100%.

Group of orthologs #526. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.pacificus:232

Q5KCA4              	100.00%		H3G2A9              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for H3G2A9 as seed ortholog is 100%.

Group of orthologs #527. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.pacificus:231

Q5KLS0              	100.00%		H3DYV1              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for H3DYV1 as seed ortholog is 100%.

Group of orthologs #528. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.pacificus:231

Q5K772              	100.00%		H3FCB6              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for H3FCB6 as seed ortholog is 100%.

Group of orthologs #529. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:133

Q5KHD3              	100.00%		H3FJ88              	100.00%
Bootstrap support for Q5KHD3 as seed ortholog is 99%.
Bootstrap support for H3FJ88 as seed ortholog is 99%.

Group of orthologs #530. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.pacificus:230

Q5KCK9              	100.00%		H3EJM8              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for H3EJM8 as seed ortholog is 100%.

Group of orthologs #531. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.pacificus:230

Q5KE15              	100.00%		H3F153              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for H3F153 as seed ortholog is 100%.

Group of orthologs #532. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.pacificus:230

Q5KK47              	100.00%		H3FQJ6              	100.00%
Bootstrap support for Q5KK47 as seed ortholog is 100%.
Bootstrap support for H3FQJ6 as seed ortholog is 100%.

Group of orthologs #533. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.pacificus:184

P0CS50              	100.00%		H3DV81              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 99%.
Bootstrap support for H3DV81 as seed ortholog is 99%.

Group of orthologs #534. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.pacificus:170

Q5KG46              	100.00%		H3E7E6              	100.00%
Bootstrap support for Q5KG46 as seed ortholog is 100%.
Bootstrap support for H3E7E6 as seed ortholog is 99%.

Group of orthologs #535. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.pacificus:229

Q5K6Y9              	100.00%		H3FCS8              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for H3FCS8 as seed ortholog is 100%.

Group of orthologs #536. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.pacificus:229

Q5KG94              	100.00%		H3FCB8              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for H3FCB8 as seed ortholog is 100%.

Group of orthologs #537. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.pacificus:228

Q5KKE2              	100.00%		H3FBH6              	100.00%
                    	       		H3G082              	38.28%
Bootstrap support for Q5KKE2 as seed ortholog is 100%.
Bootstrap support for H3FBH6 as seed ortholog is 100%.

Group of orthologs #538. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:77

Q5KNZ3              	100.00%		H3FAE9              	100.00%
                    	       		H3FXX8              	86.58%
Bootstrap support for Q5KNZ3 as seed ortholog is 98%.
Bootstrap support for H3FAE9 as seed ortholog is 98%.

Group of orthologs #539. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.pacificus:228

Q5KJ01              	100.00%		H3E9J3              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for H3E9J3 as seed ortholog is 100%.

Group of orthologs #540. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:228

Q5KJD1              	100.00%		H3ETN7              	100.00%
Bootstrap support for Q5KJD1 as seed ortholog is 93%.
Bootstrap support for H3ETN7 as seed ortholog is 100%.

Group of orthologs #541. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:228

Q5KL06              	100.00%		H3F2D9              	100.00%
Bootstrap support for Q5KL06 as seed ortholog is 93%.
Bootstrap support for H3F2D9 as seed ortholog is 100%.

Group of orthologs #542. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.pacificus:117

Q5KL88              	100.00%		H3FS41              	100.00%
Bootstrap support for Q5KL88 as seed ortholog is 99%.
Bootstrap support for H3FS41 as seed ortholog is 99%.

Group of orthologs #543. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.pacificus:227

Q5KJG1              	100.00%		H3E372              	100.00%
Bootstrap support for Q5KJG1 as seed ortholog is 100%.
Bootstrap support for H3E372 as seed ortholog is 100%.

Group of orthologs #544. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.pacificus:227

Q5KFT0              	100.00%		H3EWY7              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for H3EWY7 as seed ortholog is 100%.

Group of orthologs #545. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.pacificus:226

Q5KNJ6              	100.00%		H3E688              	100.00%
Bootstrap support for Q5KNJ6 as seed ortholog is 100%.
Bootstrap support for H3E688 as seed ortholog is 100%.

Group of orthologs #546. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.pacificus:226

Q5K8W1              	100.00%		H3FKF7              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for H3FKF7 as seed ortholog is 100%.

Group of orthologs #547. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.pacificus:88

Q5KHU8              	100.00%		H3FJA0              	100.00%
Bootstrap support for Q5KHU8 as seed ortholog is 99%.
Bootstrap support for H3FJA0 as seed ortholog is 97%.

Group of orthologs #548. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.pacificus:225

Q5KDT3              	100.00%		H3EPP5              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for H3EPP5 as seed ortholog is 100%.

Group of orthologs #549. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.pacificus:225

Q5K8A5              	100.00%		H3F511              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for H3F511 as seed ortholog is 100%.

Group of orthologs #550. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.pacificus:225

Q5KLE7              	100.00%		H3F5N6              	100.00%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for H3F5N6 as seed ortholog is 100%.

Group of orthologs #551. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:12 P.pacificus:61

Q5KB17              	100.00%		H3FPD4              	100.00%
Bootstrap support for Q5KB17 as seed ortholog is 66%.
Alternative seed ortholog is Q5KCH7 (12 bits away from this cluster)
Bootstrap support for H3FPD4 as seed ortholog is 96%.

Group of orthologs #552. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.pacificus:225

Q5KIQ7              	100.00%		H3FK69              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for H3FK69 as seed ortholog is 100%.

Group of orthologs #553. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.pacificus:225

Q5KLL4              	100.00%		H3FYE5              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for H3FYE5 as seed ortholog is 100%.

Group of orthologs #554. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:157

Q5KBK7              	100.00%		H3EP81              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for H3EP81 as seed ortholog is 100%.

Group of orthologs #555. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.pacificus:224

Q5K6V6              	100.00%		H3F0V7              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for H3F0V7 as seed ortholog is 100%.

Group of orthologs #556. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.pacificus:90

Q5KMM0              	100.00%		H3EDZ8              	100.00%
Q5KML4              	48.63%		H3EDZ5              	76.92%
                    	       		H3EDZ7              	60.00%
                    	       		H3EDZ6              	55.38%
                    	       		H3EVV9              	33.08%
Bootstrap support for Q5KMM0 as seed ortholog is 68%.
Alternative seed ortholog is P0CP82 (11 bits away from this cluster)
Bootstrap support for H3EDZ8 as seed ortholog is 99%.

Group of orthologs #557. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.pacificus:223

P0CO26              	100.00%		H3DU46              	100.00%
Bootstrap support for P0CO26 as seed ortholog is 100%.
Bootstrap support for H3DU46 as seed ortholog is 100%.

Group of orthologs #558. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.pacificus:223

Q5KI80              	100.00%		H3DWI8              	100.00%
Bootstrap support for Q5KI80 as seed ortholog is 100%.
Bootstrap support for H3DWI8 as seed ortholog is 100%.

Group of orthologs #559. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.pacificus:223

Q5KLE9              	100.00%		H3EEJ0              	100.00%
Bootstrap support for Q5KLE9 as seed ortholog is 100%.
Bootstrap support for H3EEJ0 as seed ortholog is 100%.

Group of orthologs #560. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.pacificus:223

Q5K955              	100.00%		H3F1Q0              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for H3F1Q0 as seed ortholog is 100%.

Group of orthologs #561. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:95

P0CM04              	100.00%		H3FKE4              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 99%.
Bootstrap support for H3FKE4 as seed ortholog is 98%.

Group of orthologs #562. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.pacificus:107

Q5KFU4              	100.00%		H3G2L3              	100.00%
Bootstrap support for Q5KFU4 as seed ortholog is 100%.
Bootstrap support for H3G2L3 as seed ortholog is 99%.

Group of orthologs #563. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.pacificus:159

Q5K756              	100.00%		H3E9P1              	100.00%
Q5KM34              	10.84%		H3EVC2              	45.25%
Bootstrap support for Q5K756 as seed ortholog is 100%.
Bootstrap support for H3E9P1 as seed ortholog is 100%.

Group of orthologs #564. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.pacificus:221

Q5KEB3              	100.00%		H3G191              	100.00%
                    	       		H3ENI4              	7.65%
Bootstrap support for Q5KEB3 as seed ortholog is 100%.
Bootstrap support for H3G191 as seed ortholog is 100%.

Group of orthologs #565. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.pacificus:221

Q5KDD6              	100.00%		H3EGM1              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for H3EGM1 as seed ortholog is 100%.

Group of orthologs #566. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:128

P0CP84              	100.00%		H3F525              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 99%.
Bootstrap support for H3F525 as seed ortholog is 100%.

Group of orthologs #567. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.pacificus:119

Q5KPB8              	100.00%		H3DRX4              	100.00%
                    	       		H3DRY8              	72.69%
                    	       		H3E0C3              	52.28%
                    	       		H3FHM8              	35.50%
Bootstrap support for Q5KPB8 as seed ortholog is 100%.
Bootstrap support for H3DRX4 as seed ortholog is 99%.

Group of orthologs #568. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.pacificus:220

P0CQ20              	100.00%		H3FNE9              	100.00%
P0CQ18              	50.59%		
Bootstrap support for P0CQ20 as seed ortholog is 100%.
Bootstrap support for H3FNE9 as seed ortholog is 100%.

Group of orthologs #569. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:220

Q5KKM6              	100.00%		H3EMP9              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 99%.
Bootstrap support for H3EMP9 as seed ortholog is 100%.

Group of orthologs #570. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.pacificus:220

Q5KN95              	100.00%		H3F5Q1              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for H3F5Q1 as seed ortholog is 100%.

Group of orthologs #571. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.pacificus:107

Q5KE11              	100.00%		H3EB10              	100.00%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for H3EB10 as seed ortholog is 100%.

Group of orthologs #572. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.pacificus:219

Q5K9W1              	100.00%		H3FC64              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for H3FC64 as seed ortholog is 100%.

Group of orthologs #573. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.pacificus:165

Q5KJS0              	100.00%		H3FYI1              	100.00%
Bootstrap support for Q5KJS0 as seed ortholog is 100%.
Bootstrap support for H3FYI1 as seed ortholog is 100%.

Group of orthologs #574. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.pacificus:218

Q5KA61              	100.00%		H3F9R1              	100.00%
Bootstrap support for Q5KA61 as seed ortholog is 100%.
Bootstrap support for H3F9R1 as seed ortholog is 100%.

Group of orthologs #575. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:36

Q5K7J8              	100.00%		H3FXH3              	100.00%
                    	       		H3ETW1              	51.68%
                    	       		H3FLY1              	42.83%
                    	       		H3FY24              	24.72%
                    	       		H3F2X4              	17.19%
                    	       		H3F2X7              	16.79%
                    	       		H3F2W7              	9.36%
                    	       		H3E8C4              	8.34%
Bootstrap support for Q5K7J8 as seed ortholog is 96%.
Bootstrap support for H3FXH3 as seed ortholog is 76%.

Group of orthologs #576. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.pacificus:217

Q5KJD4              	100.00%		H3EZ72              	100.00%
                    	       		H3FKN8              	51.95%
                    	       		H3EXH8              	32.99%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for H3EZ72 as seed ortholog is 100%.

Group of orthologs #577. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.pacificus:217

Q5KDW3              	100.00%		H3EJ04              	100.00%
Bootstrap support for Q5KDW3 as seed ortholog is 100%.
Bootstrap support for H3EJ04 as seed ortholog is 100%.

Group of orthologs #578. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.pacificus:217

Q5K7I5              	100.00%		H3FNB0              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for H3FNB0 as seed ortholog is 100%.

Group of orthologs #579. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.pacificus:216

P0CR74              	100.00%		H3DXW3              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for H3DXW3 as seed ortholog is 100%.

Group of orthologs #580. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.pacificus:97

Q5KAD8              	100.00%		H3EQ17              	100.00%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for H3EQ17 as seed ortholog is 98%.

Group of orthologs #581. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.pacificus:216

Q5KGJ7              	100.00%		H3FHD2              	100.00%
Bootstrap support for Q5KGJ7 as seed ortholog is 85%.
Bootstrap support for H3FHD2 as seed ortholog is 100%.

Group of orthologs #582. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:216

Q5KLH7              	100.00%		H3FZJ8              	100.00%
Bootstrap support for Q5KLH7 as seed ortholog is 99%.
Bootstrap support for H3FZJ8 as seed ortholog is 100%.

Group of orthologs #583. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.pacificus:95

P0CN94              	100.00%		H3DYE3              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for H3DYE3 as seed ortholog is 99%.

Group of orthologs #584. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.pacificus:215

Q5K8G6              	100.00%		H3EEX7              	100.00%
Bootstrap support for Q5K8G6 as seed ortholog is 100%.
Bootstrap support for H3EEX7 as seed ortholog is 100%.

Group of orthologs #585. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.pacificus:215

Q5K7Y1              	100.00%		H3EHY7              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 100%.
Bootstrap support for H3EHY7 as seed ortholog is 100%.

Group of orthologs #586. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.pacificus:215

Q5KPC8              	100.00%		H3F970              	100.00%
Bootstrap support for Q5KPC8 as seed ortholog is 100%.
Bootstrap support for H3F970 as seed ortholog is 100%.

Group of orthologs #587. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.pacificus:215

Q5KIJ0              	100.00%		H3FQX9              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for H3FQX9 as seed ortholog is 100%.

Group of orthologs #588. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.pacificus:214

Q5K959              	100.00%		H3DZB3              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 100%.
Bootstrap support for H3DZB3 as seed ortholog is 100%.

Group of orthologs #589. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.pacificus:214

Q5KNS1              	100.00%		H3FMG4              	100.00%
Bootstrap support for Q5KNS1 as seed ortholog is 100%.
Bootstrap support for H3FMG4 as seed ortholog is 100%.

Group of orthologs #590. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.pacificus:214

Q5KIF8              	100.00%		H3FUM5              	100.00%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for H3FUM5 as seed ortholog is 100%.

Group of orthologs #591. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.pacificus:214

Q5KNA1              	100.00%		H3FQJ9              	100.00%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for H3FQJ9 as seed ortholog is 100%.

Group of orthologs #592. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.pacificus:213

Q5K9R8              	100.00%		H3F683              	100.00%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for H3F683 as seed ortholog is 100%.

Group of orthologs #593. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.pacificus:36

Q5KGR6              	100.00%		H3FJL0              	100.00%
                    	       		H3DVE9              	81.73%
Bootstrap support for Q5KGR6 as seed ortholog is 97%.
Bootstrap support for H3FJL0 as seed ortholog is 93%.

Group of orthologs #594. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.pacificus:211

Q5KGU0              	100.00%		H3E634              	100.00%
Bootstrap support for Q5KGU0 as seed ortholog is 71%.
Alternative seed ortholog is Q5KEK8 (20 bits away from this cluster)
Bootstrap support for H3E634 as seed ortholog is 100%.

Group of orthologs #595. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.pacificus:26

Q9HFU4              	100.00%		H3FJT3              	100.00%
Bootstrap support for Q9HFU4 as seed ortholog is 100%.
Bootstrap support for H3FJT3 as seed ortholog is 73%.
Alternative seed ortholog is H3FTF6 (26 bits away from this cluster)

Group of orthologs #596. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.pacificus:211

Q5KKC2              	100.00%		H3FRL4              	100.00%
Bootstrap support for Q5KKC2 as seed ortholog is 99%.
Bootstrap support for H3FRL4 as seed ortholog is 100%.

Group of orthologs #597. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.pacificus:210

Q5KIJ9              	100.00%		H3FT10              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for H3FT10 as seed ortholog is 100%.

Group of orthologs #598. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.pacificus:100

P0CQ42              	100.00%		H3E0U5              	100.00%
Bootstrap support for P0CQ42 as seed ortholog is 97%.
Bootstrap support for H3E0U5 as seed ortholog is 100%.

Group of orthologs #599. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.pacificus:209

Q5KJQ1              	100.00%		H3DYD5              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for H3DYD5 as seed ortholog is 100%.

Group of orthologs #600. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.pacificus:209

Q5KIP3              	100.00%		H3EBH9              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for H3EBH9 as seed ortholog is 100%.

Group of orthologs #601. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.pacificus:209

Q5KAG9              	100.00%		H3FKK9              	100.00%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for H3FKK9 as seed ortholog is 100%.

Group of orthologs #602. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.pacificus:43

Q5K6V3              	100.00%		H3E4N5              	100.00%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for H3E4N5 as seed ortholog is 93%.

Group of orthologs #603. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:92

Q5KKS0              	100.00%		H3EXI7              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 92%.
Bootstrap support for H3EXI7 as seed ortholog is 99%.

Group of orthologs #604. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.pacificus:208

P0CQ56              	100.00%		H3FS62              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for H3FS62 as seed ortholog is 100%.

Group of orthologs #605. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 P.pacificus:207

Q5KJJ4              	100.00%		H3F371              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for H3F371 as seed ortholog is 100%.

Group of orthologs #606. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.pacificus:206

Q5KND4              	100.00%		H3DTW2              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for H3DTW2 as seed ortholog is 100%.

Group of orthologs #607. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.pacificus:206

Q5KIL7              	100.00%		H3EES6              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for H3EES6 as seed ortholog is 100%.

Group of orthologs #608. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.pacificus:205

P0CP10              	100.00%		H3EDC2              	100.00%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for H3EDC2 as seed ortholog is 100%.

Group of orthologs #609. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:30 P.pacificus:53

Q5KGS1              	100.00%		H3F5G2              	100.00%
Bootstrap support for Q5KGS1 as seed ortholog is 89%.
Bootstrap support for H3F5G2 as seed ortholog is 99%.

Group of orthologs #610. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.pacificus:205

Q5K8X8              	100.00%		H3FP07              	100.00%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for H3FP07 as seed ortholog is 100%.

Group of orthologs #611. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.pacificus:204

P0CN78              	100.00%		H3E9P5              	100.00%
Bootstrap support for P0CN78 as seed ortholog is 100%.
Bootstrap support for H3E9P5 as seed ortholog is 100%.

Group of orthologs #612. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.pacificus:203

Q5KJ21              	100.00%		H3EGL8              	100.00%
Q5K7P5              	31.49%		
Q5KHG5              	29.63%		
Bootstrap support for Q5KJ21 as seed ortholog is 97%.
Bootstrap support for H3EGL8 as seed ortholog is 100%.

Group of orthologs #613. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.pacificus:55

P0CS76              	100.00%		H3DRZ9              	100.00%
                    	       		H3DS01              	54.97%
Bootstrap support for P0CS76 as seed ortholog is 71%.
Alternative seed ortholog is Q5KP65 (24 bits away from this cluster)
Bootstrap support for H3DRZ9 as seed ortholog is 90%.

Group of orthologs #614. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.pacificus:203

Q5KK64              	100.00%		H3EDY6              	100.00%
Bootstrap support for Q5KK64 as seed ortholog is 100%.
Bootstrap support for H3EDY6 as seed ortholog is 100%.

Group of orthologs #615. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.pacificus:203

Q5KP95              	100.00%		H3END1              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for H3END1 as seed ortholog is 100%.

Group of orthologs #616. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.pacificus:203

Q5KA46              	100.00%		H3F594              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for H3F594 as seed ortholog is 100%.

Group of orthologs #617. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.pacificus:118

Q5K717              	100.00%		H3FSX8              	100.00%
Bootstrap support for Q5K717 as seed ortholog is 89%.
Bootstrap support for H3FSX8 as seed ortholog is 99%.

Group of orthologs #618. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.pacificus:203

Q5KJ58              	100.00%		H3FP26              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 99%.
Bootstrap support for H3FP26 as seed ortholog is 100%.

Group of orthologs #619. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.pacificus:203

Q5KLX2              	100.00%		H3FSB5              	100.00%
Bootstrap support for Q5KLX2 as seed ortholog is 100%.
Bootstrap support for H3FSB5 as seed ortholog is 100%.

Group of orthologs #620. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.pacificus:57

Q5KGS9              	100.00%		H3FMC2              	100.00%
                    	       		H3F8M6              	35.43%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for H3FMC2 as seed ortholog is 71%.
Alternative seed ortholog is H3FHS9 (57 bits away from this cluster)

Group of orthologs #621. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.pacificus:201

Q5K8X3              	100.00%		H3DVW4              	100.00%
Q5KF44              	9.09%		H3EXL3              	81.79%
                    	       		H3FST7              	36.76%
                    	       		H3FUY2              	30.24%
                    	       		H3EEF2              	11.94%
Bootstrap support for Q5K8X3 as seed ortholog is 100%.
Bootstrap support for H3DVW4 as seed ortholog is 100%.

Group of orthologs #622. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.pacificus:201

Q5KHA2              	100.00%		H3EEF3              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for H3EEF3 as seed ortholog is 100%.

Group of orthologs #623. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.pacificus:201

Q5KIC5              	100.00%		H3F4X5              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for H3F4X5 as seed ortholog is 100%.

Group of orthologs #624. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.pacificus:201

P0CP70              	100.00%		H3FQW6              	100.00%
Bootstrap support for P0CP70 as seed ortholog is 100%.
Bootstrap support for H3FQW6 as seed ortholog is 100%.

Group of orthologs #625. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.pacificus:101

Q5KJ50              	100.00%		H3G192              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for H3G192 as seed ortholog is 97%.

Group of orthologs #626. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.pacificus:30

P0CM44              	100.00%		H3EZH2              	100.00%
Bootstrap support for P0CM44 as seed ortholog is 56%.
Alternative seed ortholog is P0CM46 (5 bits away from this cluster)
Bootstrap support for H3EZH2 as seed ortholog is 50%.
Alternative seed ortholog is H3EJ08 (30 bits away from this cluster)

Group of orthologs #627. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:200

Q5KB57              	100.00%		H3EWV0              	100.00%
Bootstrap support for Q5KB57 as seed ortholog is 100%.
Bootstrap support for H3EWV0 as seed ortholog is 100%.

Group of orthologs #628. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:200

Q5KP63              	100.00%		H3EKU1              	100.00%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for H3EKU1 as seed ortholog is 100%.

Group of orthologs #629. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:200

Q5KFG2              	100.00%		H3EXM6              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for H3EXM6 as seed ortholog is 100%.

Group of orthologs #630. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:200

Q5KAQ3              	100.00%		H3FHI3              	100.00%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for H3FHI3 as seed ortholog is 100%.

Group of orthologs #631. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.pacificus:200

Q5KDE0              	100.00%		H3G0X7              	100.00%
Bootstrap support for Q5KDE0 as seed ortholog is 100%.
Bootstrap support for H3G0X7 as seed ortholog is 100%.

Group of orthologs #632. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.pacificus:37

P0CO40              	100.00%		H3EP82              	100.00%
                    	       		H3F1D7              	8.90%
                    	       		H3DUV3              	7.56%
Bootstrap support for P0CO40 as seed ortholog is 100%.
Bootstrap support for H3EP82 as seed ortholog is 76%.

Group of orthologs #633. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.pacificus:58

Q5KI67              	100.00%		H3EWE8              	100.00%
Bootstrap support for Q5KI67 as seed ortholog is 100%.
Bootstrap support for H3EWE8 as seed ortholog is 97%.

Group of orthologs #634. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.pacificus:199

Q5KH08              	100.00%		H3FC60              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for H3FC60 as seed ortholog is 100%.

Group of orthologs #635. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.pacificus:199

Q5KQ33              	100.00%		H3G3T6              	100.00%
Bootstrap support for Q5KQ33 as seed ortholog is 99%.
Bootstrap support for H3G3T6 as seed ortholog is 100%.

Group of orthologs #636. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

Q5KAM4              	100.00%		H3E0S8              	100.00%
                    	       		H3E7U3              	67.00%
                    	       		H3E0S9              	55.33%
                    	       		H3EJX0              	42.25%
                    	       		H3E7Y7              	24.75%
                    	       		H3G440              	24.55%
                    	       		H3E7Y8              	22.33%
                    	       		H3E7Y3              	16.90%
Bootstrap support for Q5KAM4 as seed ortholog is 100%.
Bootstrap support for H3E0S8 as seed ortholog is 100%.

Group of orthologs #637. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

Q5K8H5              	100.00%		H3FVN1              	100.00%
                    	       		H3FZZ4              	50.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for H3FVN1 as seed ortholog is 100%.

Group of orthologs #638. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

Q5KGL6              	100.00%		H3DYP6              	100.00%
Bootstrap support for Q5KGL6 as seed ortholog is 100%.
Bootstrap support for H3DYP6 as seed ortholog is 100%.

Group of orthologs #639. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

P0CM34              	100.00%		H3E9K8              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for H3E9K8 as seed ortholog is 100%.

Group of orthologs #640. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

P0CN10              	100.00%		H3FSH3              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for H3FSH3 as seed ortholog is 100%.

Group of orthologs #641. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

Q5KJJ3              	100.00%		H3FKK8              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for H3FKK8 as seed ortholog is 100%.

Group of orthologs #642. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.pacificus:198

Q5KBW6              	100.00%		H3FX00              	100.00%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for H3FX00 as seed ortholog is 100%.

Group of orthologs #643. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.pacificus:95

Q5KIZ3              	100.00%		H3E8B7              	100.00%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for H3E8B7 as seed ortholog is 99%.

Group of orthologs #644. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.pacificus:197

Q5K726              	100.00%		H3F1N1              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for H3F1N1 as seed ortholog is 100%.

Group of orthologs #645. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.pacificus:197

Q5KG36              	100.00%		H3FKF2              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for H3FKF2 as seed ortholog is 100%.

Group of orthologs #646. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.pacificus:197

Q5KCK3              	100.00%		H3G139              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for H3G139 as seed ortholog is 100%.

Group of orthologs #647. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:196

P0CQ02              	100.00%		H3FHH6              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 88%.
Bootstrap support for H3FHH6 as seed ortholog is 100%.

Group of orthologs #648. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.pacificus:196

Q5KDS9              	100.00%		H3FTC7              	100.00%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for H3FTC7 as seed ortholog is 100%.

Group of orthologs #649. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.pacificus:91

Q5KKF0              	100.00%		H3F5Y1              	100.00%
Bootstrap support for Q5KKF0 as seed ortholog is 93%.
Bootstrap support for H3F5Y1 as seed ortholog is 98%.

Group of orthologs #650. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.pacificus:195

Q5KBK6              	100.00%		H3FGI1              	100.00%
Bootstrap support for Q5KBK6 as seed ortholog is 100%.
Bootstrap support for H3FGI1 as seed ortholog is 100%.

Group of orthologs #651. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.pacificus:194

Q5KJZ6              	100.00%		H3ESI8              	100.00%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for H3ESI8 as seed ortholog is 100%.

Group of orthologs #652. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.pacificus:114

Q5K938              	100.00%		H3DUC9              	100.00%
                    	       		H3ENG7              	69.05%
Bootstrap support for Q5K938 as seed ortholog is 100%.
Bootstrap support for H3DUC9 as seed ortholog is 100%.

Group of orthologs #653. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.pacificus:193

Q5KBT6              	100.00%		H3DVN4              	100.00%
                    	       		H3EMP3              	22.74%
Bootstrap support for Q5KBT6 as seed ortholog is 100%.
Bootstrap support for H3DVN4 as seed ortholog is 100%.

Group of orthologs #654. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.pacificus:193

Q5KAE4              	100.00%		H3EX52              	100.00%
Bootstrap support for Q5KAE4 as seed ortholog is 100%.
Bootstrap support for H3EX52 as seed ortholog is 100%.

Group of orthologs #655. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.pacificus:193

Q5KB01              	100.00%		H3FWY1              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for H3FWY1 as seed ortholog is 100%.

Group of orthologs #656. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.pacificus:193

Q5KNZ4              	100.00%		H3FK79              	100.00%
Bootstrap support for Q5KNZ4 as seed ortholog is 100%.
Bootstrap support for H3FK79 as seed ortholog is 100%.

Group of orthologs #657. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.pacificus:193

Q5KH61              	100.00%		H3FWC6              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for H3FWC6 as seed ortholog is 100%.

Group of orthologs #658. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.pacificus:192

Q5KPG1              	100.00%		H3F5M3              	100.00%
                    	       		H3EYU6              	9.62%
Bootstrap support for Q5KPG1 as seed ortholog is 100%.
Bootstrap support for H3F5M3 as seed ortholog is 100%.

Group of orthologs #659. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.pacificus:192

Q5KDM0              	100.00%		H3FK74              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for H3FK74 as seed ortholog is 100%.

Group of orthologs #660. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:114

Q5K9W3              	100.00%		H3E834              	100.00%
Bootstrap support for Q5K9W3 as seed ortholog is 99%.
Bootstrap support for H3E834 as seed ortholog is 100%.

Group of orthologs #661. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:8 P.pacificus:57

Q5KJ96              	100.00%		H3FMY1              	100.00%
Bootstrap support for Q5KJ96 as seed ortholog is 60%.
Alternative seed ortholog is Q5KK41 (8 bits away from this cluster)
Bootstrap support for H3FMY1 as seed ortholog is 94%.

Group of orthologs #662. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.pacificus:191

Q5KNU5              	100.00%		H3FSH2              	100.00%
Bootstrap support for Q5KNU5 as seed ortholog is 100%.
Bootstrap support for H3FSH2 as seed ortholog is 100%.

Group of orthologs #663. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.pacificus:190

Q5KAY9              	100.00%		H3E331              	100.00%
Q5KQ59              	74.46%		
Bootstrap support for Q5KAY9 as seed ortholog is 100%.
Bootstrap support for H3E331 as seed ortholog is 100%.

Group of orthologs #664. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.pacificus:190

Q5KKF8              	100.00%		H3DX22              	100.00%
                    	       		H3DX24              	72.75%
Bootstrap support for Q5KKF8 as seed ortholog is 100%.
Bootstrap support for H3DX22 as seed ortholog is 100%.

Group of orthologs #665. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.pacificus:105

Q5KN42              	100.00%		H3FGX9              	100.00%
                    	       		H3E259              	41.86%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for H3FGX9 as seed ortholog is 99%.

Group of orthologs #666. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.pacificus:190

Q5KBN7              	100.00%		H3DTV8              	100.00%
Bootstrap support for Q5KBN7 as seed ortholog is 100%.
Bootstrap support for H3DTV8 as seed ortholog is 100%.

Group of orthologs #667. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.pacificus:127

Q5KG91              	100.00%		H3EV68              	100.00%
Bootstrap support for Q5KG91 as seed ortholog is 99%.
Bootstrap support for H3EV68 as seed ortholog is 99%.

Group of orthologs #668. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.pacificus:190

Q5KKV3              	100.00%		H3EWZ2              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for H3EWZ2 as seed ortholog is 100%.

Group of orthologs #669. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.pacificus:190

Q5K7M8              	100.00%		H3FQQ2              	100.00%
Bootstrap support for Q5K7M8 as seed ortholog is 100%.
Bootstrap support for H3FQQ2 as seed ortholog is 100%.

Group of orthologs #670. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:30 P.pacificus:116

Q5K8F5              	100.00%		H3EHG7              	100.00%
                    	       		H3EJP7              	48.31%
                    	       		H3E7C9              	42.41%
                    	       		H3EHG4              	41.98%
                    	       		H3E201              	41.14%
                    	       		H3EHG5              	40.08%
                    	       		H3G208              	32.49%
                    	       		H3EHG6              	17.09%
Bootstrap support for Q5K8F5 as seed ortholog is 87%.
Bootstrap support for H3EHG7 as seed ortholog is 99%.

Group of orthologs #671. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.pacificus:189

Q5KH27              	100.00%		H3FJW8              	100.00%
Bootstrap support for Q5KH27 as seed ortholog is 100%.
Bootstrap support for H3FJW8 as seed ortholog is 100%.

Group of orthologs #672. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.pacificus:189

Q5KP19              	100.00%		H3FMZ3              	100.00%
Bootstrap support for Q5KP19 as seed ortholog is 100%.
Bootstrap support for H3FMZ3 as seed ortholog is 100%.

Group of orthologs #673. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.pacificus:107

Q5KPC4              	100.00%		H3E3I4              	100.00%
Bootstrap support for Q5KPC4 as seed ortholog is 100%.
Bootstrap support for H3E3I4 as seed ortholog is 99%.

Group of orthologs #674. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:62

P0CN98              	100.00%		H3FVM7              	100.00%
Bootstrap support for P0CN98 as seed ortholog is 99%.
Bootstrap support for H3FVM7 as seed ortholog is 99%.

Group of orthologs #675. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:188

Q5KHI3              	100.00%		H3FKH8              	100.00%
Bootstrap support for Q5KHI3 as seed ortholog is 97%.
Bootstrap support for H3FKH8 as seed ortholog is 100%.

Group of orthologs #676. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:37 P.pacificus:49

Q5K9E7              	100.00%		H3EH17              	100.00%
Q5KEY5              	10.04%		H3EH21              	76.45%
                    	       		H3DSZ3              	41.54%
                    	       		H3DSY7              	21.91%
                    	       		H3DSY6              	16.04%
                    	       		H3EH16              	14.08%
                    	       		H3DSZ4              	9.72%
Bootstrap support for Q5K9E7 as seed ortholog is 83%.
Bootstrap support for H3EH17 as seed ortholog is 94%.

Group of orthologs #677. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.pacificus:187

Q5KER8              	100.00%		H3EJD7              	100.00%
Q5KGW3              	16.65%		
Bootstrap support for Q5KER8 as seed ortholog is 100%.
Bootstrap support for H3EJD7 as seed ortholog is 100%.

Group of orthologs #678. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.pacificus:187

Q5K9Z8              	100.00%		H3FY85              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 100%.
Bootstrap support for H3FY85 as seed ortholog is 100%.

Group of orthologs #679. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.pacificus:187

Q5KPF9              	100.00%		H3FRY8              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for H3FRY8 as seed ortholog is 100%.

Group of orthologs #680. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

Q5KM78              	100.00%		H3FYV2              	100.00%
Q5KCL1              	13.52%		
Bootstrap support for Q5KM78 as seed ortholog is 100%.
Bootstrap support for H3FYV2 as seed ortholog is 100%.

Group of orthologs #681. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

Q5K9K1              	100.00%		H3ENC6              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for H3ENC6 as seed ortholog is 100%.

Group of orthologs #682. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.pacificus:186

Q5KGB2              	100.00%		H3EI33              	100.00%
Bootstrap support for Q5KGB2 as seed ortholog is 100%.
Bootstrap support for H3EI33 as seed ortholog is 100%.

Group of orthologs #683. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

Q5KCQ4              	100.00%		H3F879              	100.00%
Bootstrap support for Q5KCQ4 as seed ortholog is 100%.
Bootstrap support for H3F879 as seed ortholog is 100%.

Group of orthologs #684. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

P0CO14              	100.00%		H3FSC7              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for H3FSC7 as seed ortholog is 100%.

Group of orthologs #685. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

Q5KAB2              	100.00%		H3FQ49              	100.00%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for H3FQ49 as seed ortholog is 100%.

Group of orthologs #686. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:102

Q5KEU0              	100.00%		H3FT67              	100.00%
Bootstrap support for Q5KEU0 as seed ortholog is 99%.
Bootstrap support for H3FT67 as seed ortholog is 99%.

Group of orthologs #687. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

Q5KJU1              	100.00%		H3FSZ1              	100.00%
Bootstrap support for Q5KJU1 as seed ortholog is 100%.
Bootstrap support for H3FSZ1 as seed ortholog is 100%.

Group of orthologs #688. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.pacificus:186

Q5KLY0              	100.00%		H3G2N3              	100.00%
Bootstrap support for Q5KLY0 as seed ortholog is 100%.
Bootstrap support for H3G2N3 as seed ortholog is 100%.

Group of orthologs #689. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.pacificus:185

Q5K7G5              	100.00%		H3EGF9              	100.00%
                    	       		H3EGF6              	67.78%
                    	       		H3EGF4              	53.97%
                    	       		H3E898              	39.85%
                    	       		H3FPA6              	22.59%
                    	       		H3E4S9              	16.95%
                    	       		H3ENB2              	14.02%
Bootstrap support for Q5K7G5 as seed ortholog is 100%.
Bootstrap support for H3EGF9 as seed ortholog is 100%.

Group of orthologs #690. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:46 P.pacificus:185

Q5KQ29              	100.00%		H3FZ60              	100.00%
                    	       		H3FD78              	52.39%
                    	       		H3ERY4              	14.66%
                    	       		H3F8M9              	6.96%
Bootstrap support for Q5KQ29 as seed ortholog is 83%.
Bootstrap support for H3FZ60 as seed ortholog is 100%.

Group of orthologs #691. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.pacificus:185

Q5KN70              	100.00%		H3E068              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 92%.
Bootstrap support for H3E068 as seed ortholog is 100%.

Group of orthologs #692. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.pacificus:185

Q5KF53              	100.00%		H3EYZ7              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for H3EYZ7 as seed ortholog is 100%.

Group of orthologs #693. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.pacificus:185

Q5KCE0              	100.00%		H3F3S0              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for H3F3S0 as seed ortholog is 100%.

Group of orthologs #694. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.pacificus:17

Q5KIB2              	100.00%		H3FKM2              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for H3FKM2 as seed ortholog is 70%.
Alternative seed ortholog is H3FKL1 (17 bits away from this cluster)

Group of orthologs #695. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.pacificus:184

Q5K6Z0              	100.00%		H3ESF6              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for H3ESF6 as seed ortholog is 100%.

Group of orthologs #696. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.pacificus:184

Q5KK16              	100.00%		H3F9V2              	100.00%
Bootstrap support for Q5KK16 as seed ortholog is 100%.
Bootstrap support for H3F9V2 as seed ortholog is 100%.

Group of orthologs #697. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.pacificus:184

Q5KA21              	100.00%		H3G2S9              	100.00%
Bootstrap support for Q5KA21 as seed ortholog is 100%.
Bootstrap support for H3G2S9 as seed ortholog is 100%.

Group of orthologs #698. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.pacificus:183

P0CO28              	100.00%		H3E5W8              	100.00%
                    	       		H3DV01              	10.92%
Bootstrap support for P0CO28 as seed ortholog is 100%.
Bootstrap support for H3E5W8 as seed ortholog is 100%.

Group of orthologs #699. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.pacificus:183

Q5KLK2              	100.00%		H3FKB5              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for H3FKB5 as seed ortholog is 100%.

Group of orthologs #700. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.pacificus:182

Q5KIE9              	100.00%		H3F6Z8              	100.00%
                    	       		H3DUS6              	16.38%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for H3F6Z8 as seed ortholog is 100%.

Group of orthologs #701. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.pacificus:182

Q5K720              	100.00%		H3F7C2              	100.00%
Bootstrap support for Q5K720 as seed ortholog is 99%.
Bootstrap support for H3F7C2 as seed ortholog is 100%.

Group of orthologs #702. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 P.pacificus:182

P0CQ64              	100.00%		H3FT88              	100.00%
Bootstrap support for P0CQ64 as seed ortholog is 100%.
Bootstrap support for H3FT88 as seed ortholog is 100%.

Group of orthologs #703. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.pacificus:181

Q5KD79              	100.00%		H3DVP4              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for H3DVP4 as seed ortholog is 100%.

Group of orthologs #704. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.pacificus:94

Q5KAZ2              	100.00%		H3EHJ6              	100.00%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for H3EHJ6 as seed ortholog is 99%.

Group of orthologs #705. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.pacificus:181

Q5KD06              	100.00%		H3F7J2              	100.00%
Bootstrap support for Q5KD06 as seed ortholog is 100%.
Bootstrap support for H3F7J2 as seed ortholog is 100%.

Group of orthologs #706. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.pacificus:181

Q5KMT0              	100.00%		H3F401              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for H3F401 as seed ortholog is 100%.

Group of orthologs #707. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:39 P.pacificus:68

Q5KBI5              	100.00%		H3FHM0              	100.00%
Bootstrap support for Q5KBI5 as seed ortholog is 93%.
Bootstrap support for H3FHM0 as seed ortholog is 98%.

Group of orthologs #708. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.pacificus:29

Q5KN16              	100.00%		H3FNW9              	100.00%
                    	       		H3FZH5              	9.94%
                    	       		H3FZH8              	7.45%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for H3FNW9 as seed ortholog is 86%.

Group of orthologs #709. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.pacificus:180

Q5KD59              	100.00%		H3FSC2              	100.00%
                    	       		H3F989              	38.48%
Bootstrap support for Q5KD59 as seed ortholog is 100%.
Bootstrap support for H3FSC2 as seed ortholog is 100%.

Group of orthologs #710. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.pacificus:121

Q5KIX3              	100.00%		H3DSC8              	100.00%
Bootstrap support for Q5KIX3 as seed ortholog is 76%.
Bootstrap support for H3DSC8 as seed ortholog is 99%.

Group of orthologs #711. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.pacificus:180

Q5KLH8              	100.00%		H3E0P7              	100.00%
Bootstrap support for Q5KLH8 as seed ortholog is 100%.
Bootstrap support for H3E0P7 as seed ortholog is 100%.

Group of orthologs #712. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 P.pacificus:180

Q5KH16              	100.00%		H3FQE8              	100.00%
Bootstrap support for Q5KH16 as seed ortholog is 100%.
Bootstrap support for H3FQE8 as seed ortholog is 100%.

Group of orthologs #713. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 P.pacificus:179

Q5KGM8              	100.00%		C8CLL7              	100.00%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for C8CLL7 as seed ortholog is 100%.

Group of orthologs #714. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:90

P0CP86              	100.00%		H3FP46              	100.00%
Bootstrap support for P0CP86 as seed ortholog is 99%.
Bootstrap support for H3FP46 as seed ortholog is 99%.

Group of orthologs #715. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.pacificus:179

Q5KAB6              	100.00%		H3FS94              	100.00%
Bootstrap support for Q5KAB6 as seed ortholog is 98%.
Bootstrap support for H3FS94 as seed ortholog is 100%.

Group of orthologs #716. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.pacificus:13

Q5KH94              	100.00%		H3F5G8              	100.00%
Q5KI95              	100.00%		H3E4F4              	100.00%
Q5KLM8              	15.43%		H3FBK7              	26.08%
Q5K9D1              	15.25%		H3EIB9              	15.09%
Q5KKZ8              	5.14%		H3EIE9              	9.27%
                    	       		H3EYS2              	8.41%
Bootstrap support for Q5KH94 as seed ortholog is 88%.
Bootstrap support for Q5KI95 as seed ortholog is 79%.
Bootstrap support for H3F5G8 as seed ortholog is 62%.
Alternative seed ortholog is H3DSD9 (13 bits away from this cluster)
Bootstrap support for H3E4F4 as seed ortholog is 54%.
Alternative seed ortholog is H3DSD9 (13 bits away from this cluster)

Group of orthologs #717. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.pacificus:178

Q5KD00              	100.00%		H3FE14              	100.00%
                    	       		H3FT84              	39.01%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for H3FE14 as seed ortholog is 100%.

Group of orthologs #718. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.pacificus:178

Q5KQ70              	100.00%		H3G1U6              	100.00%
                    	       		H3G1U8              	18.88%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for H3G1U6 as seed ortholog is 100%.

Group of orthologs #719. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.pacificus:67

P0CR30              	100.00%		H3DV53              	100.00%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for H3DV53 as seed ortholog is 99%.

Group of orthologs #720. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.pacificus:178

P0CP80              	100.00%		H3EHF1              	100.00%
Bootstrap support for P0CP80 as seed ortholog is 100%.
Bootstrap support for H3EHF1 as seed ortholog is 100%.

Group of orthologs #721. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.pacificus:178

Q5KFJ7              	100.00%		H3EBY4              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for H3EBY4 as seed ortholog is 100%.

Group of orthologs #722. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.pacificus:178

Q5KPH3              	100.00%		H3EPR4              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for H3EPR4 as seed ortholog is 100%.

Group of orthologs #723. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.pacificus:21

Q5KFC1              	100.00%		H3FKJ2              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 100%.
Bootstrap support for H3FKJ2 as seed ortholog is 83%.

Group of orthologs #724. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.pacificus:177

Q5KMA0              	100.00%		H3E638              	100.00%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for H3E638 as seed ortholog is 100%.

Group of orthologs #725. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.pacificus:177

Q5KP07              	100.00%		H3FZK8              	100.00%
Bootstrap support for Q5KP07 as seed ortholog is 100%.
Bootstrap support for H3FZK8 as seed ortholog is 100%.

Group of orthologs #726. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.pacificus:176

Q5KI33              	100.00%		H3F3B1              	100.00%
                    	       		H3DSR6              	8.55%
                    	       		H3E872              	5.73%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for H3F3B1 as seed ortholog is 100%.

Group of orthologs #727. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.pacificus:66

Q5K7V1              	100.00%		H3FLC4              	100.00%
                    	       		H3G0U3              	14.78%
                    	       		H3FH16              	9.57%
Bootstrap support for Q5K7V1 as seed ortholog is 78%.
Bootstrap support for H3FLC4 as seed ortholog is 95%.

Group of orthologs #728. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.pacificus:176

Q5KK51              	100.00%		H3F6V4              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 98%.
Bootstrap support for H3F6V4 as seed ortholog is 100%.

Group of orthologs #729. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.pacificus:176

Q5KN33              	100.00%		H3FJM5              	100.00%
Bootstrap support for Q5KN33 as seed ortholog is 100%.
Bootstrap support for H3FJM5 as seed ortholog is 100%.

Group of orthologs #730. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:175

P0CO02              	100.00%		H3EM66              	100.00%
                    	       		H3FVM8              	100.00%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for H3EM66 as seed ortholog is 100%.
Bootstrap support for H3FVM8 as seed ortholog is 100%.

Group of orthologs #731. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:175

Q5KEZ9              	100.00%		H3G271              	100.00%
                    	       		H3FRQ4              	14.95%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for H3G271 as seed ortholog is 100%.

Group of orthologs #732. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:175

Q5KCI8              	100.00%		H3E9M5              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for H3E9M5 as seed ortholog is 100%.

Group of orthologs #733. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:175

Q5KCY7              	100.00%		H3EEJ7              	100.00%
Bootstrap support for Q5KCY7 as seed ortholog is 100%.
Bootstrap support for H3EEJ7 as seed ortholog is 100%.

Group of orthologs #734. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:175

Q5KA31              	100.00%		H3ET65              	100.00%
Bootstrap support for Q5KA31 as seed ortholog is 100%.
Bootstrap support for H3ET65 as seed ortholog is 100%.

Group of orthologs #735. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.pacificus:175

Q5KGP0              	100.00%		H3ERI0              	100.00%
Bootstrap support for Q5KGP0 as seed ortholog is 100%.
Bootstrap support for H3ERI0 as seed ortholog is 100%.

Group of orthologs #736. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.pacificus:174

Q5K9W6              	100.00%		H3DYT2              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for H3DYT2 as seed ortholog is 100%.

Group of orthologs #737. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:174

Q5KM42              	100.00%		H3EM88              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 99%.
Bootstrap support for H3EM88 as seed ortholog is 100%.

Group of orthologs #738. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.pacificus:174

Q5KN72              	100.00%		H3FSL9              	100.00%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for H3FSL9 as seed ortholog is 100%.

Group of orthologs #739. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 P.pacificus:174

Q5KK09              	100.00%		H3G295              	100.00%
Bootstrap support for Q5KK09 as seed ortholog is 100%.
Bootstrap support for H3G295 as seed ortholog is 100%.

Group of orthologs #740. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.pacificus:62

Q5KLQ4              	100.00%		H3F4G1              	100.00%
Q5KLR2              	53.51%		H3DX80              	83.11%
                    	       		H3F1G7              	5.83%
Bootstrap support for Q5KLQ4 as seed ortholog is 100%.
Bootstrap support for H3F4G1 as seed ortholog is 96%.

Group of orthologs #741. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.pacificus:173

Q5KGZ7              	100.00%		H3FFJ9              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for H3FFJ9 as seed ortholog is 100%.

Group of orthologs #742. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.pacificus:172

Q5K9M8              	100.00%		H3FW53              	100.00%
                    	       		H3FKL4              	17.89%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for H3FW53 as seed ortholog is 100%.

Group of orthologs #743. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.pacificus:172

Q5KQ87              	100.00%		H3E4S0              	100.00%
Bootstrap support for Q5KQ87 as seed ortholog is 100%.
Bootstrap support for H3E4S0 as seed ortholog is 100%.

Group of orthologs #744. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.pacificus:26

Q5KAS7              	100.00%		H3ESI6              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for H3ESI6 as seed ortholog is 94%.

Group of orthologs #745. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.pacificus:25

P40909              	100.00%		H3FCE1              	100.00%
Bootstrap support for P40909 as seed ortholog is 100%.
Bootstrap support for H3FCE1 as seed ortholog is 96%.

Group of orthologs #746. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.pacificus:65

Q5K6X5              	100.00%		H3E0U2              	100.00%
                    	       		H3F047              	20.00%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for H3E0U2 as seed ortholog is 89%.

Group of orthologs #747. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 P.pacificus:171

P0CQ50              	100.00%		H3EEL1              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for H3EEL1 as seed ortholog is 100%.

Group of orthologs #748. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.pacificus:170

Q5KG24              	100.00%		H3E9U3              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 100%.
Bootstrap support for H3E9U3 as seed ortholog is 100%.

Group of orthologs #749. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.pacificus:170

Q5KGQ0              	100.00%		H3F435              	100.00%
Bootstrap support for Q5KGQ0 as seed ortholog is 61%.
Alternative seed ortholog is Q5K7Y4 (11 bits away from this cluster)
Bootstrap support for H3F435 as seed ortholog is 100%.

Group of orthologs #750. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.pacificus:170

P0CP30              	100.00%		H3FKA9              	100.00%
Bootstrap support for P0CP30 as seed ortholog is 100%.
Bootstrap support for H3FKA9 as seed ortholog is 100%.

Group of orthologs #751. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:46 P.pacificus:54

Q5KDH2              	100.00%		H3FHR0              	100.00%
Bootstrap support for Q5KDH2 as seed ortholog is 88%.
Bootstrap support for H3FHR0 as seed ortholog is 95%.

Group of orthologs #752. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.pacificus:170

Q5KAL7              	100.00%		H3FYL6              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for H3FYL6 as seed ortholog is 100%.

Group of orthologs #753. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.pacificus:170

Q5KNT0              	100.00%		H3FSG3              	100.00%
Bootstrap support for Q5KNT0 as seed ortholog is 100%.
Bootstrap support for H3FSG3 as seed ortholog is 100%.

Group of orthologs #754. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.pacificus:170

Q5KI08              	100.00%		H3G203              	100.00%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for H3G203 as seed ortholog is 100%.

Group of orthologs #755. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.pacificus:169

Q5KC49              	100.00%		H3FQM0              	100.00%
                    	       		H3F3A9              	27.81%
Bootstrap support for Q5KC49 as seed ortholog is 100%.
Bootstrap support for H3FQM0 as seed ortholog is 100%.

Group of orthologs #756. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.pacificus:169

Q5KDH9              	100.00%		H3EXM7              	100.00%
Bootstrap support for Q5KDH9 as seed ortholog is 100%.
Bootstrap support for H3EXM7 as seed ortholog is 100%.

Group of orthologs #757. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.pacificus:27

Q5KIW7              	100.00%		H3F1B8              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for H3F1B8 as seed ortholog is 86%.

Group of orthologs #758. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.pacificus:168

Q5KID5              	100.00%		H3EVL7              	100.00%
                    	       		H3E6B8              	53.31%
                    	       		H3F337              	35.02%
Bootstrap support for Q5KID5 as seed ortholog is 100%.
Bootstrap support for H3EVL7 as seed ortholog is 100%.

Group of orthologs #759. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.pacificus:168

Q5KN74              	100.00%		H3EZG2              	100.00%
Bootstrap support for Q5KN74 as seed ortholog is 90%.
Bootstrap support for H3EZG2 as seed ortholog is 100%.

Group of orthologs #760. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 P.pacificus:22

Q5K8G7              	100.00%		H3FVT7              	100.00%
Bootstrap support for Q5K8G7 as seed ortholog is 100%.
Bootstrap support for H3FVT7 as seed ortholog is 64%.
Alternative seed ortholog is H3EPD5 (22 bits away from this cluster)

Group of orthologs #761. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.pacificus:167

Q5K7S5              	100.00%		H3EM90              	100.00%
Bootstrap support for Q5K7S5 as seed ortholog is 100%.
Bootstrap support for H3EM90 as seed ortholog is 100%.

Group of orthologs #762. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.pacificus:167

Q5KBR5              	100.00%		H3F393              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for H3F393 as seed ortholog is 100%.

Group of orthologs #763. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.pacificus:167

P0CN40              	100.00%		H3F9M4              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for H3F9M4 as seed ortholog is 100%.

Group of orthologs #764. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

P0CS66              	100.00%		H3G215              	100.00%
                    	       		H3F9E5              	5.85%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for H3G215 as seed ortholog is 100%.

Group of orthologs #765. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

Q5K7C2              	100.00%		H3DW23              	100.00%
Bootstrap support for Q5K7C2 as seed ortholog is 100%.
Bootstrap support for H3DW23 as seed ortholog is 100%.

Group of orthologs #766. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

Q5KBT3              	100.00%		H3E0U9              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for H3E0U9 as seed ortholog is 100%.

Group of orthologs #767. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

Q5K8Y6              	100.00%		H3E9M8              	100.00%
Bootstrap support for Q5K8Y6 as seed ortholog is 100%.
Bootstrap support for H3E9M8 as seed ortholog is 100%.

Group of orthologs #768. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.pacificus:72

Q5KCQ7              	100.00%		H3F524              	100.00%
Bootstrap support for Q5KCQ7 as seed ortholog is 92%.
Bootstrap support for H3F524 as seed ortholog is 99%.

Group of orthologs #769. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

P0CQ06              	100.00%		H3FC58              	100.00%
Bootstrap support for P0CQ06 as seed ortholog is 100%.
Bootstrap support for H3FC58 as seed ortholog is 100%.

Group of orthologs #770. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

Q5KPB3              	100.00%		H3FAD3              	100.00%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for H3FAD3 as seed ortholog is 100%.

Group of orthologs #771. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.pacificus:166

Q5KND0              	100.00%		H3FNC8              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for H3FNC8 as seed ortholog is 100%.

Group of orthologs #772. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.pacificus:73

Q5KJW2              	100.00%		H3F845              	100.00%
                    	       		H3EZN9              	55.02%
                    	       		H3DWE8              	16.87%
Bootstrap support for Q5KJW2 as seed ortholog is 93%.
Bootstrap support for H3F845 as seed ortholog is 99%.

Group of orthologs #773. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.pacificus:165

Q5K6U7              	100.00%		H3EED7              	100.00%
Bootstrap support for Q5K6U7 as seed ortholog is 100%.
Bootstrap support for H3EED7 as seed ortholog is 100%.

Group of orthologs #774. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.pacificus:165

Q5K7E1              	100.00%		H3FM64              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for H3FM64 as seed ortholog is 100%.

Group of orthologs #775. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.pacificus:164

Q5KFF3              	100.00%		H3EY67              	100.00%
                    	       		H3G0M1              	86.84%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for H3EY67 as seed ortholog is 100%.

Group of orthologs #776. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:164

Q5K6W9              	100.00%		H3EQ19              	100.00%
Bootstrap support for Q5K6W9 as seed ortholog is 75%.
Bootstrap support for H3EQ19 as seed ortholog is 100%.

Group of orthologs #777. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.pacificus:164

P0CO06              	100.00%		H3FCA0              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for H3FCA0 as seed ortholog is 100%.

Group of orthologs #778. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.pacificus:164

Q5KPM6              	100.00%		H3FIF8              	100.00%
Bootstrap support for Q5KPM6 as seed ortholog is 100%.
Bootstrap support for H3FIF8 as seed ortholog is 100%.

Group of orthologs #779. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.pacificus:164

Q5KIM1              	100.00%		H3G0R0              	100.00%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for H3G0R0 as seed ortholog is 100%.

Group of orthologs #780. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:164

Q5KLT0              	100.00%		H3G0Z4              	100.00%
Bootstrap support for Q5KLT0 as seed ortholog is 99%.
Bootstrap support for H3G0Z4 as seed ortholog is 100%.

Group of orthologs #781. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.pacificus:163

Q5KM60              	100.00%		H3FPY6              	100.00%
                    	       		H3EM00              	14.81%
Bootstrap support for Q5KM60 as seed ortholog is 100%.
Bootstrap support for H3FPY6 as seed ortholog is 100%.

Group of orthologs #782. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.pacificus:163

Q5KGV9              	100.00%		H3DYK2              	100.00%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for H3DYK2 as seed ortholog is 100%.

Group of orthologs #783. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:163

Q5KLT5              	100.00%		H3ECV2              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 93%.
Bootstrap support for H3ECV2 as seed ortholog is 100%.

Group of orthologs #784. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.pacificus:163

Q5KB45              	100.00%		H3F1G5              	100.00%
Bootstrap support for Q5KB45 as seed ortholog is 100%.
Bootstrap support for H3F1G5 as seed ortholog is 100%.

Group of orthologs #785. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:58

Q5KGB5              	100.00%		H3F3N8              	100.00%
Bootstrap support for Q5KGB5 as seed ortholog is 99%.
Bootstrap support for H3F3N8 as seed ortholog is 99%.

Group of orthologs #786. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.pacificus:163

Q5KEQ0              	100.00%		H3FJZ2              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for H3FJZ2 as seed ortholog is 100%.

Group of orthologs #787. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:163

Q5KGC9              	100.00%		H3FJ10              	100.00%
Bootstrap support for Q5KGC9 as seed ortholog is 96%.
Bootstrap support for H3FJ10 as seed ortholog is 100%.

Group of orthologs #788. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.pacificus:163

Q5KGF9              	100.00%		H3G0Z7              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for H3G0Z7 as seed ortholog is 100%.

Group of orthologs #789. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.pacificus:162

Q5KAJ6              	100.00%		H3EGQ5              	100.00%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for H3EGQ5 as seed ortholog is 100%.

Group of orthologs #790. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.pacificus:162

Q5KI18              	100.00%		H3EWB4              	100.00%
Bootstrap support for Q5KI18 as seed ortholog is 100%.
Bootstrap support for H3EWB4 as seed ortholog is 100%.

Group of orthologs #791. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.pacificus:25

Q5KJM4              	100.00%		H3F5F2              	100.00%
Bootstrap support for Q5KJM4 as seed ortholog is 100%.
Bootstrap support for H3F5F2 as seed ortholog is 53%.
Alternative seed ortholog is H3FEF4 (25 bits away from this cluster)

Group of orthologs #792. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.pacificus:161

Q5KE09              	100.00%		H3G101              	100.00%
                    	       		H3FS92              	12.69%
Bootstrap support for Q5KE09 as seed ortholog is 100%.
Bootstrap support for H3G101 as seed ortholog is 100%.

Group of orthologs #793. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:42

Q5KAK0              	100.00%		H3EHI7              	100.00%
Bootstrap support for Q5KAK0 as seed ortholog is 96%.
Bootstrap support for H3EHI7 as seed ortholog is 89%.

Group of orthologs #794. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.pacificus:161

Q5KDQ5              	100.00%		H3EV35              	100.00%
Bootstrap support for Q5KDQ5 as seed ortholog is 100%.
Bootstrap support for H3EV35 as seed ortholog is 100%.

Group of orthologs #795. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.pacificus:161

Q5KH09              	100.00%		H3EUT0              	100.00%
Bootstrap support for Q5KH09 as seed ortholog is 100%.
Bootstrap support for H3EUT0 as seed ortholog is 100%.

Group of orthologs #796. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.pacificus:161

Q5K9K6              	100.00%		H3FB29              	100.00%
Bootstrap support for Q5K9K6 as seed ortholog is 84%.
Bootstrap support for H3FB29 as seed ortholog is 100%.

Group of orthologs #797. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 P.pacificus:161

Q5KL89              	100.00%		H3FNB8              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for H3FNB8 as seed ortholog is 100%.

Group of orthologs #798. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.pacificus:160

Q5KFZ1              	100.00%		H3F3U1              	100.00%
Bootstrap support for Q5KFZ1 as seed ortholog is 100%.
Bootstrap support for H3F3U1 as seed ortholog is 100%.

Group of orthologs #799. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.pacificus:160

P0CO46              	100.00%		H3FSI8              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for H3FSI8 as seed ortholog is 100%.

Group of orthologs #800. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.pacificus:159

Q5KLP4              	100.00%		H3EV90              	100.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for H3EV90 as seed ortholog is 100%.

Group of orthologs #801. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.pacificus:17

Q5KIK8              	100.00%		H3FGI2              	100.00%
                    	       		H3FPD6              	30.31%
Bootstrap support for Q5KIK8 as seed ortholog is 100%.
Bootstrap support for H3FGI2 as seed ortholog is 72%.
Alternative seed ortholog is H3FJZ8 (17 bits away from this cluster)

Group of orthologs #802. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.pacificus:158

Q5KKX5              	100.00%		H3ED03              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for H3ED03 as seed ortholog is 100%.

Group of orthologs #803. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:5

P0CP14              	100.00%		H3F8K7              	100.00%
Bootstrap support for P0CP14 as seed ortholog is 99%.
Bootstrap support for H3F8K7 as seed ortholog is 55%.
Alternative seed ortholog is H3EPS0 (5 bits away from this cluster)

Group of orthologs #804. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.pacificus:157

Q5KA56              	100.00%		H3ETI1              	100.00%
                    	       		H3FSL1              	33.54%
                    	       		H3E7F6              	5.93%
Bootstrap support for Q5KA56 as seed ortholog is 100%.
Bootstrap support for H3ETI1 as seed ortholog is 100%.

Group of orthologs #805. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.pacificus:157

Q5KKD1              	100.00%		H3DWL2              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for H3DWL2 as seed ortholog is 100%.

Group of orthologs #806. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.pacificus:157

Q5KIJ6              	100.00%		H3DYE9              	100.00%
Bootstrap support for Q5KIJ6 as seed ortholog is 100%.
Bootstrap support for H3DYE9 as seed ortholog is 100%.

Group of orthologs #807. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 P.pacificus:157

Q5KG67              	100.00%		H3FEK1              	100.00%
Bootstrap support for Q5KG67 as seed ortholog is 100%.
Bootstrap support for H3FEK1 as seed ortholog is 100%.

Group of orthologs #808. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:8

Q5KA58              	100.00%		H3FXL1              	100.00%
                    	       		H3FG46              	17.80%
                    	       		H3ELZ0              	12.35%
                    	       		H3ELY8              	12.19%
                    	       		H3FG45              	11.95%
                    	       		H3FG12              	10.10%
                    	       		H3FG48              	6.50%
                    	       		H3F919              	5.37%
Bootstrap support for Q5KA58 as seed ortholog is 100%.
Bootstrap support for H3FXL1 as seed ortholog is 55%.
Alternative seed ortholog is H3FVB4 (8 bits away from this cluster)

Group of orthologs #809. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:55

Q5KNP2              	100.00%		H3ECJ2              	100.00%
                    	       		H3F3Z0              	81.15%
Bootstrap support for Q5KNP2 as seed ortholog is 100%.
Bootstrap support for H3ECJ2 as seed ortholog is 94%.

Group of orthologs #810. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:156

Q5K9Y2              	100.00%		H3EPN9              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for H3EPN9 as seed ortholog is 100%.

Group of orthologs #811. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:156

Q5KBP2              	100.00%		H3FA70              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for H3FA70 as seed ortholog is 100%.

Group of orthologs #812. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:156

Q5KAI5              	100.00%		H3FYW4              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for H3FYW4 as seed ortholog is 100%.

Group of orthologs #813. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 P.pacificus:156

Q5KIH4              	100.00%		H3FWT8              	100.00%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for H3FWT8 as seed ortholog is 100%.

Group of orthologs #814. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.pacificus:155

Q5KQ08              	100.00%		H3G3J7              	100.00%
                    	       		H3FH73              	23.75%
                    	       		H3DWE7              	11.88%
Bootstrap support for Q5KQ08 as seed ortholog is 100%.
Bootstrap support for H3G3J7 as seed ortholog is 100%.

Group of orthologs #815. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.pacificus:155

Q5KJT1              	100.00%		H3E5C9              	100.00%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for H3E5C9 as seed ortholog is 100%.

Group of orthologs #816. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.pacificus:155

Q5KLJ6              	100.00%		H3FG27              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for H3FG27 as seed ortholog is 100%.

Group of orthologs #817. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 P.pacificus:155

Q5K8W6              	100.00%		H3FZV9              	100.00%
Bootstrap support for Q5K8W6 as seed ortholog is 100%.
Bootstrap support for H3FZV9 as seed ortholog is 100%.

Group of orthologs #818. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.pacificus:8

Q5KEA1              	100.00%		H3DRK7              	100.00%
                    	       		H3EJ78              	14.12%
Bootstrap support for Q5KEA1 as seed ortholog is 100%.
Bootstrap support for H3DRK7 as seed ortholog is 61%.
Alternative seed ortholog is H3EAF2 (8 bits away from this cluster)

Group of orthologs #819. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:154

Q5KGV6              	100.00%		H3EQ95              	100.00%
                    	       		H3FH54              	72.80%
Bootstrap support for Q5KGV6 as seed ortholog is 87%.
Bootstrap support for H3EQ95 as seed ortholog is 100%.

Group of orthologs #820. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.pacificus:154

Q5KFJ2              	100.00%		H3ET27              	100.00%
                    	       		H3ET26              	24.02%
Bootstrap support for Q5KFJ2 as seed ortholog is 97%.
Bootstrap support for H3ET27 as seed ortholog is 100%.

Group of orthologs #821. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.pacificus:154

Q5KHZ6              	100.00%		H3E691              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for H3E691 as seed ortholog is 100%.

Group of orthologs #822. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.pacificus:154

P0CN66              	100.00%		H3F7J3              	100.00%
Bootstrap support for P0CN66 as seed ortholog is 100%.
Bootstrap support for H3F7J3 as seed ortholog is 100%.

Group of orthologs #823. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.pacificus:154

Q5KMC4              	100.00%		H3FW28              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for H3FW28 as seed ortholog is 100%.

Group of orthologs #824. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:153

Q5KN58              	100.00%		H3EC29              	100.00%
Bootstrap support for Q5KN58 as seed ortholog is 92%.
Bootstrap support for H3EC29 as seed ortholog is 100%.

Group of orthologs #825. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.pacificus:153

Q5KIG4              	100.00%		H3F023              	100.00%
Bootstrap support for Q5KIG4 as seed ortholog is 100%.
Bootstrap support for H3F023 as seed ortholog is 100%.

Group of orthologs #826. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 P.pacificus:153

Q5KCP3              	100.00%		H3FLD6              	100.00%
Bootstrap support for Q5KCP3 as seed ortholog is 100%.
Bootstrap support for H3FLD6 as seed ortholog is 100%.

Group of orthologs #827. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.pacificus:152

Q5KJ08              	100.00%		H3ENI6              	100.00%
Bootstrap support for Q5KJ08 as seed ortholog is 96%.
Bootstrap support for H3ENI6 as seed ortholog is 100%.

Group of orthologs #828. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.pacificus:106

Q5K8F4              	100.00%		H3ET01              	100.00%
                    	       		H3EUK8              	33.37%
Bootstrap support for Q5K8F4 as seed ortholog is 87%.
Bootstrap support for H3ET01 as seed ortholog is 98%.

Group of orthologs #829. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.pacificus:151

Q5K7J3              	100.00%		H3DVP1              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for H3DVP1 as seed ortholog is 100%.

Group of orthologs #830. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.pacificus:151

Q5KCD4              	100.00%		H3FMZ0              	100.00%
Bootstrap support for Q5KCD4 as seed ortholog is 100%.
Bootstrap support for H3FMZ0 as seed ortholog is 100%.

Group of orthologs #831. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.pacificus:151

Q5KGK7              	100.00%		H3FK45              	100.00%
Bootstrap support for Q5KGK7 as seed ortholog is 100%.
Bootstrap support for H3FK45 as seed ortholog is 100%.

Group of orthologs #832. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.pacificus:151

Q5KLS1              	100.00%		H3FT62              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for H3FT62 as seed ortholog is 100%.

Group of orthologs #833. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.pacificus:151

Q5KF34              	100.00%		H3G0T8              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for H3G0T8 as seed ortholog is 100%.

Group of orthologs #834. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.pacificus:151

Q5KHA1              	100.00%		H3FYU3              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for H3FYU3 as seed ortholog is 100%.

Group of orthologs #835. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.pacificus:150

Q5KGR3              	100.00%		H3FZU4              	100.00%
                    	       		H3FZU3              	19.32%
                    	       		H3DV27              	17.90%
                    	       		H3DUE0              	13.31%
                    	       		H3DZG7              	10.84%
                    	       		H3FGA3              	5.06%
Bootstrap support for Q5KGR3 as seed ortholog is 100%.
Bootstrap support for H3FZU4 as seed ortholog is 100%.

Group of orthologs #836. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.pacificus:150

Q5KN65              	100.00%		H3FPK9              	100.00%
                    	       		H3EAH0              	59.24%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for H3FPK9 as seed ortholog is 100%.

Group of orthologs #837. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.pacificus:150

P0CR18              	100.00%		H3EZT1              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for H3EZT1 as seed ortholog is 100%.

Group of orthologs #838. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.pacificus:150

Q5KD80              	100.00%		H3FS79              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for H3FS79 as seed ortholog is 100%.

Group of orthologs #839. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.pacificus:149

Q5KE04              	100.00%		H3DRM3              	100.00%
                    	       		H3FIV7              	24.79%
Bootstrap support for Q5KE04 as seed ortholog is 100%.
Bootstrap support for H3DRM3 as seed ortholog is 100%.

Group of orthologs #840. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:38 P.pacificus:149

Q5KGW6              	100.00%		H3EM89              	100.00%
Bootstrap support for Q5KGW6 as seed ortholog is 42%.
Alternative seed ortholog is Q5KI76 (38 bits away from this cluster)
Bootstrap support for H3EM89 as seed ortholog is 100%.

Group of orthologs #841. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.pacificus:149

Q5KM44              	100.00%		H3EW15              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for H3EW15 as seed ortholog is 100%.

Group of orthologs #842. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 P.pacificus:149

Q5KPX1              	100.00%		H3EZS7              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for H3EZS7 as seed ortholog is 100%.

Group of orthologs #843. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.pacificus:95

Q5KGI4              	100.00%		H3FVM3              	100.00%
Bootstrap support for Q5KGI4 as seed ortholog is 99%.
Bootstrap support for H3FVM3 as seed ortholog is 99%.

Group of orthologs #844. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.pacificus:148

Q5KK99              	100.00%		H3DWF3              	100.00%
Bootstrap support for Q5KK99 as seed ortholog is 100%.
Bootstrap support for H3DWF3 as seed ortholog is 100%.

Group of orthologs #845. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:49

Q5KM35              	100.00%		H3EK11              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 99%.
Bootstrap support for H3EK11 as seed ortholog is 99%.

Group of orthologs #846. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.pacificus:62

Q5K766              	100.00%		H3EZR2              	100.00%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for H3EZR2 as seed ortholog is 98%.

Group of orthologs #847. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.pacificus:148

Q5K8G5              	100.00%		H3F183              	100.00%
Bootstrap support for Q5K8G5 as seed ortholog is 100%.
Bootstrap support for H3F183 as seed ortholog is 100%.

Group of orthologs #848. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 P.pacificus:147

P0CP88              	100.00%		H3EEF0              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for H3EEF0 as seed ortholog is 100%.

Group of orthologs #849. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.pacificus:146

Q5K9U5              	100.00%		H3DST6              	100.00%
Bootstrap support for Q5K9U5 as seed ortholog is 100%.
Bootstrap support for H3DST6 as seed ortholog is 100%.

Group of orthologs #850. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.pacificus:146

Q5K7J1              	100.00%		H3DYX5              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for H3DYX5 as seed ortholog is 100%.

Group of orthologs #851. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.pacificus:146

Q5KQ88              	100.00%		H3F9E1              	100.00%
Bootstrap support for Q5KQ88 as seed ortholog is 100%.
Bootstrap support for H3F9E1 as seed ortholog is 100%.

Group of orthologs #852. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.pacificus:145

Q5KFL1              	100.00%		H3ECX5              	100.00%
                    	       		H3ECX4              	20.33%
Bootstrap support for Q5KFL1 as seed ortholog is 86%.
Bootstrap support for H3ECX5 as seed ortholog is 100%.

Group of orthologs #853. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.pacificus:145

Q5KML9              	100.00%		H3DTC9              	100.00%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for H3DTC9 as seed ortholog is 100%.

Group of orthologs #854. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.pacificus:145

Q5KFU9              	100.00%		H3EAM9              	100.00%
Bootstrap support for Q5KFU9 as seed ortholog is 100%.
Bootstrap support for H3EAM9 as seed ortholog is 100%.

Group of orthologs #855. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.pacificus:145

Q5K774              	100.00%		H3EWF3              	100.00%
Bootstrap support for Q5K774 as seed ortholog is 100%.
Bootstrap support for H3EWF3 as seed ortholog is 100%.

Group of orthologs #856. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.pacificus:145

Q5K972              	100.00%		H3FJS2              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for H3FJS2 as seed ortholog is 100%.

Group of orthologs #857. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:57

Q5KBZ2              	100.00%		H3E8P7              	100.00%
Q5KK08              	40.62%		
Bootstrap support for Q5KBZ2 as seed ortholog is 90%.
Bootstrap support for H3E8P7 as seed ortholog is 92%.

Group of orthologs #858. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.pacificus:144

Q5K8W2              	100.00%		H3F5F1              	100.00%
Bootstrap support for Q5K8W2 as seed ortholog is 99%.
Bootstrap support for H3F5F1 as seed ortholog is 100%.

Group of orthologs #859. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.pacificus:144

Q5KMR3              	100.00%		H3F6M0              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for H3F6M0 as seed ortholog is 100%.

Group of orthologs #860. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.pacificus:144

Q5KA10              	100.00%		H3FVH3              	100.00%
Bootstrap support for Q5KA10 as seed ortholog is 93%.
Bootstrap support for H3FVH3 as seed ortholog is 100%.

Group of orthologs #861. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.pacificus:144

Q5K777              	100.00%		H3G2C1              	100.00%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for H3G2C1 as seed ortholog is 100%.

Group of orthologs #862. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.pacificus:144

Q5KPM8              	100.00%		H3FYD2              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for H3FYD2 as seed ortholog is 100%.

Group of orthologs #863. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:75

Q5KES1              	100.00%		H3F3I9              	100.00%
                    	       		H3DUD4              	17.24%
Bootstrap support for Q5KES1 as seed ortholog is 97%.
Bootstrap support for H3F3I9 as seed ortholog is 96%.

Group of orthologs #864. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

Q5KEP5              	100.00%		H3FDM9              	100.00%
                    	       		H3EVW1              	23.82%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for H3FDM9 as seed ortholog is 100%.

Group of orthologs #865. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

Q5KP94              	100.00%		H3G0K7              	100.00%
Q5KP78              	53.84%		
Bootstrap support for Q5KP94 as seed ortholog is 100%.
Bootstrap support for H3G0K7 as seed ortholog is 100%.

Group of orthologs #866. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

P0CL94              	100.00%		H3E670              	100.00%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for H3E670 as seed ortholog is 100%.

Group of orthologs #867. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

Q5KBQ7              	100.00%		H3E1E7              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for H3E1E7 as seed ortholog is 100%.

Group of orthologs #868. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

Q5KK73              	100.00%		H3DWG2              	100.00%
Bootstrap support for Q5KK73 as seed ortholog is 100%.
Bootstrap support for H3DWG2 as seed ortholog is 100%.

Group of orthologs #869. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

Q5K905              	100.00%		H3F0X7              	100.00%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for H3F0X7 as seed ortholog is 100%.

Group of orthologs #870. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.pacificus:143

Q5KLA5              	100.00%		H3F3T4              	100.00%
Bootstrap support for Q5KLA5 as seed ortholog is 96%.
Bootstrap support for H3F3T4 as seed ortholog is 100%.

Group of orthologs #871. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.pacificus:143

Q5KGF3              	100.00%		H3G2B4              	100.00%
Bootstrap support for Q5KGF3 as seed ortholog is 100%.
Bootstrap support for H3G2B4 as seed ortholog is 100%.

Group of orthologs #872. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:86

Q5KHZ1              	100.00%		H3DVI8              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for H3DVI8 as seed ortholog is 99%.

Group of orthologs #873. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:142

Q5KNA5              	100.00%		H3EHG3              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for H3EHG3 as seed ortholog is 100%.

Group of orthologs #874. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:142

Q5KQ96              	100.00%		H3EQ45              	100.00%
Bootstrap support for Q5KQ96 as seed ortholog is 100%.
Bootstrap support for H3EQ45 as seed ortholog is 100%.

Group of orthologs #875. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:142

Q5K6Y5              	100.00%		H3FSS7              	100.00%
Bootstrap support for Q5K6Y5 as seed ortholog is 100%.
Bootstrap support for H3FSS7 as seed ortholog is 100%.

Group of orthologs #876. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.pacificus:142

Q5KK70              	100.00%		H3G1U4              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for H3G1U4 as seed ortholog is 100%.

Group of orthologs #877. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

Q5KQ44              	100.00%		H3FSD7              	100.00%
Q5KPV8              	48.21%		
Bootstrap support for Q5KQ44 as seed ortholog is 100%.
Bootstrap support for H3FSD7 as seed ortholog is 100%.

Group of orthologs #878. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

Q5KPS5              	100.00%		H3DTJ4              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for H3DTJ4 as seed ortholog is 100%.

Group of orthologs #879. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

P0CR48              	100.00%		H3EG47              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for H3EG47 as seed ortholog is 100%.

Group of orthologs #880. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

Q5KAX8              	100.00%		H3EJ15              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for H3EJ15 as seed ortholog is 100%.

Group of orthologs #881. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

Q5KBP8              	100.00%		H3EKY0              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for H3EKY0 as seed ortholog is 100%.

Group of orthologs #882. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

P0CM80              	100.00%		H3FRQ5              	100.00%
Bootstrap support for P0CM80 as seed ortholog is 100%.
Bootstrap support for H3FRQ5 as seed ortholog is 100%.

Group of orthologs #883. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.pacificus:141

Q5KD44              	100.00%		H3FS14              	100.00%
Bootstrap support for Q5KD44 as seed ortholog is 100%.
Bootstrap support for H3FS14 as seed ortholog is 100%.

Group of orthologs #884. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.pacificus:140

Q5KAN9              	100.00%		H3FZA6              	100.00%
Bootstrap support for Q5KAN9 as seed ortholog is 100%.
Bootstrap support for H3FZA6 as seed ortholog is 100%.

Group of orthologs #885. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.pacificus:139

Q5KLP3              	100.00%		H3EPH4              	100.00%
                    	       		H3DVH9              	6.93%
Bootstrap support for Q5KLP3 as seed ortholog is 100%.
Bootstrap support for H3EPH4 as seed ortholog is 100%.

Group of orthologs #886. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.pacificus:139

Q5KDF8              	100.00%		H3E0Z4              	100.00%
Bootstrap support for Q5KDF8 as seed ortholog is 100%.
Bootstrap support for H3E0Z4 as seed ortholog is 100%.

Group of orthologs #887. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.pacificus:12

Q5KFS4              	100.00%		H3F5F4              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for H3F5F4 as seed ortholog is 69%.
Alternative seed ortholog is H3E9K5 (12 bits away from this cluster)

Group of orthologs #888. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.pacificus:139

Q5K8P5              	100.00%		H3FKD7              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for H3FKD7 as seed ortholog is 100%.

Group of orthologs #889. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:139

Q5KM13              	100.00%		H3FGE9              	100.00%
Bootstrap support for Q5KM13 as seed ortholog is 99%.
Bootstrap support for H3FGE9 as seed ortholog is 100%.

Group of orthologs #890. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.pacificus:139

Q5KL04              	100.00%		H3FKE9              	100.00%
Bootstrap support for Q5KL04 as seed ortholog is 100%.
Bootstrap support for H3FKE9 as seed ortholog is 100%.

Group of orthologs #891. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.pacificus:139

Q5KIZ8              	100.00%		H3FY64              	100.00%
Bootstrap support for Q5KIZ8 as seed ortholog is 99%.
Bootstrap support for H3FY64 as seed ortholog is 100%.

Group of orthologs #892. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:138

Q5KLM0              	100.00%		H3E650              	100.00%
                    	       		H3EKS8              	23.02%
Bootstrap support for Q5KLM0 as seed ortholog is 100%.
Bootstrap support for H3E650 as seed ortholog is 100%.

Group of orthologs #893. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:138

Q5KJE5              	100.00%		H3DRH3              	100.00%
Bootstrap support for Q5KJE5 as seed ortholog is 100%.
Bootstrap support for H3DRH3 as seed ortholog is 100%.

Group of orthologs #894. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:138

Q5KPW9              	100.00%		H3E0H3              	100.00%
Bootstrap support for Q5KPW9 as seed ortholog is 100%.
Bootstrap support for H3E0H3 as seed ortholog is 100%.

Group of orthologs #895. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:82

Q5KEB8              	100.00%		H3EAQ3              	100.00%
Bootstrap support for Q5KEB8 as seed ortholog is 100%.
Bootstrap support for H3EAQ3 as seed ortholog is 99%.

Group of orthologs #896. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:7 P.pacificus:138

Q5KDH7              	100.00%		H3EGP1              	100.00%
Bootstrap support for Q5KDH7 as seed ortholog is 52%.
Alternative seed ortholog is P0CR22 (7 bits away from this cluster)
Bootstrap support for H3EGP1 as seed ortholog is 100%.

Group of orthologs #897. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:138

Q5KMX2              	100.00%		H3EAQ9              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 99%.
Bootstrap support for H3EAQ9 as seed ortholog is 100%.

Group of orthologs #898. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:138

Q5KL21              	100.00%		H3EFB4              	100.00%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for H3EFB4 as seed ortholog is 100%.

Group of orthologs #899. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:78

Q5KD76              	100.00%		H3ENV0              	100.00%
Bootstrap support for Q5KD76 as seed ortholog is 100%.
Bootstrap support for H3ENV0 as seed ortholog is 99%.

Group of orthologs #900. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:138

Q5KIK2              	100.00%		H3EJ34              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for H3EJ34 as seed ortholog is 100%.

Group of orthologs #901. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.pacificus:138

Q5KJJ7              	100.00%		H3EIZ9              	100.00%
Bootstrap support for Q5KJJ7 as seed ortholog is 100%.
Bootstrap support for H3EIZ9 as seed ortholog is 100%.

Group of orthologs #902. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.pacificus:138

Q5KFQ2              	100.00%		H3F896              	100.00%
Bootstrap support for Q5KFQ2 as seed ortholog is 52%.
Alternative seed ortholog is Q5KQ86 (5 bits away from this cluster)
Bootstrap support for H3F896 as seed ortholog is 100%.

Group of orthologs #903. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:138

Q5KK88              	100.00%		H3FCF8              	100.00%
Bootstrap support for Q5KK88 as seed ortholog is 96%.
Bootstrap support for H3FCF8 as seed ortholog is 100%.

Group of orthologs #904. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:137

P0CP08              	100.00%		H3EQ40              	100.00%
                    	       		H3EQ39              	82.18%
Bootstrap support for P0CP08 as seed ortholog is 100%.
Bootstrap support for H3EQ40 as seed ortholog is 100%.

Group of orthologs #905. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:137

Q5KLL8              	100.00%		H3DXC7              	100.00%
Bootstrap support for Q5KLL8 as seed ortholog is 100%.
Bootstrap support for H3DXC7 as seed ortholog is 100%.

Group of orthologs #906. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:44

Q5K721              	100.00%		H3EJ21              	100.00%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for H3EJ21 as seed ortholog is 77%.

Group of orthologs #907. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:91

Q5KH36              	100.00%		H3ETP9              	100.00%
Bootstrap support for Q5KH36 as seed ortholog is 100%.
Bootstrap support for H3ETP9 as seed ortholog is 99%.

Group of orthologs #908. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:35

Q5KLA9              	100.00%		H3ES36              	100.00%
Bootstrap support for Q5KLA9 as seed ortholog is 100%.
Bootstrap support for H3ES36 as seed ortholog is 76%.

Group of orthologs #909. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:137

Q5KI23              	100.00%		H3F535              	100.00%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for H3F535 as seed ortholog is 100%.

Group of orthologs #910. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:137

Q5KLK6              	100.00%		H3FJL8              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for H3FJL8 as seed ortholog is 100%.

Group of orthologs #911. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:137

Q5KLV9              	100.00%		H3FNK2              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for H3FNK2 as seed ortholog is 100%.

Group of orthologs #912. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.pacificus:137

Q5K7B3              	100.00%		H3G2F9              	100.00%
Bootstrap support for Q5K7B3 as seed ortholog is 100%.
Bootstrap support for H3G2F9 as seed ortholog is 100%.

Group of orthologs #913. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:34 P.pacificus:136

Q5KAA2              	100.00%		H3FEH4              	100.00%
Q5KLV1              	17.12%		
Bootstrap support for Q5KAA2 as seed ortholog is 97%.
Bootstrap support for H3FEH4 as seed ortholog is 100%.

Group of orthologs #914. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:136

Q5KBT5              	100.00%		H3EE85              	100.00%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for H3EE85 as seed ortholog is 100%.

Group of orthologs #915. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:136

Q5K7U3              	100.00%		H3ES23              	100.00%
Bootstrap support for Q5K7U3 as seed ortholog is 100%.
Bootstrap support for H3ES23 as seed ortholog is 100%.

Group of orthologs #916. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:136

Q5K9S4              	100.00%		H3F3N5              	100.00%
Bootstrap support for Q5K9S4 as seed ortholog is 100%.
Bootstrap support for H3F3N5 as seed ortholog is 100%.

Group of orthologs #917. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.pacificus:136

Q5KBX4              	100.00%		H3F6V9              	100.00%
Bootstrap support for Q5KBX4 as seed ortholog is 100%.
Bootstrap support for H3F6V9 as seed ortholog is 100%.

Group of orthologs #918. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:10 P.pacificus:63

Q5KGN1              	100.00%		H3FF95              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 63%.
Alternative seed ortholog is P0CS16 (10 bits away from this cluster)
Bootstrap support for H3FF95 as seed ortholog is 98%.

Group of orthologs #919. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.pacificus:135

Q5KNC5              	100.00%		H3EZR5              	100.00%
Bootstrap support for Q5KNC5 as seed ortholog is 100%.
Bootstrap support for H3EZR5 as seed ortholog is 100%.

Group of orthologs #920. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.pacificus:54

Q5KL56              	100.00%		H3G0B9              	100.00%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for H3G0B9 as seed ortholog is 99%.

Group of orthologs #921. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.pacificus:134

Q5KIJ3              	100.00%		H3EPH8              	100.00%
                    	       		H3F976              	69.65%
Bootstrap support for Q5KIJ3 as seed ortholog is 100%.
Bootstrap support for H3EPH8 as seed ortholog is 100%.

Group of orthologs #922. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.pacificus:134

P0CM26              	100.00%		H3EEQ5              	100.00%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for H3EEQ5 as seed ortholog is 100%.

Group of orthologs #923. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:134

Q5KPJ5              	100.00%		H3ESP0              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 92%.
Bootstrap support for H3ESP0 as seed ortholog is 100%.

Group of orthologs #924. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.pacificus:134

Q5K8Z9              	100.00%		H3FA10              	100.00%
Bootstrap support for Q5K8Z9 as seed ortholog is 100%.
Bootstrap support for H3FA10 as seed ortholog is 100%.

Group of orthologs #925. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.pacificus:134

Q5KK68              	100.00%		H3FHG0              	100.00%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for H3FHG0 as seed ortholog is 100%.

Group of orthologs #926. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 P.pacificus:133

Q5KLY7              	100.00%		H3E823              	100.00%
                    	       		H3FME5              	38.70%
                    	       		H3ED00              	25.67%
                    	       		H3EJ53              	24.01%
Bootstrap support for Q5KLY7 as seed ortholog is 100%.
Bootstrap support for H3E823 as seed ortholog is 100%.

Group of orthologs #927. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.pacificus:133

Q5KFR2              	100.00%		H3EN09              	100.00%
Bootstrap support for Q5KFR2 as seed ortholog is 100%.
Bootstrap support for H3EN09 as seed ortholog is 100%.

Group of orthologs #928. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 P.pacificus:132

P0CR60              	100.00%		H3E651              	100.00%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for H3E651 as seed ortholog is 100%.

Group of orthologs #929. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.pacificus:132

Q5KFP2              	100.00%		H3F5P5              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 99%.
Bootstrap support for H3F5P5 as seed ortholog is 100%.

Group of orthologs #930. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:131

P0CR54              	100.00%		H3EQ41              	100.00%
                    	       		H3E8A4              	22.17%
Bootstrap support for P0CR54 as seed ortholog is 97%.
Bootstrap support for H3EQ41 as seed ortholog is 100%.

Group of orthologs #931. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.pacificus:131

Q5KFI3              	100.00%		H3E9V3              	100.00%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for H3E9V3 as seed ortholog is 100%.

Group of orthologs #932. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.pacificus:131

Q5KGH4              	100.00%		H3EQA5              	100.00%
Bootstrap support for Q5KGH4 as seed ortholog is 100%.
Bootstrap support for H3EQA5 as seed ortholog is 100%.

Group of orthologs #933. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.pacificus:131

Q5KGZ8              	100.00%		H3FM93              	100.00%
Bootstrap support for Q5KGZ8 as seed ortholog is 100%.
Bootstrap support for H3FM93 as seed ortholog is 100%.

Group of orthologs #934. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.pacificus:131

Q5KNC7              	100.00%		H3FYW3              	100.00%
Bootstrap support for Q5KNC7 as seed ortholog is 100%.
Bootstrap support for H3FYW3 as seed ortholog is 100%.

Group of orthologs #935. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.pacificus:130

Q5KCC1              	100.00%		H3F536              	100.00%
Bootstrap support for Q5KCC1 as seed ortholog is 100%.
Bootstrap support for H3F536 as seed ortholog is 100%.

Group of orthologs #936. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.pacificus:130

Q5K9I2              	100.00%		H3F954              	100.00%
Bootstrap support for Q5K9I2 as seed ortholog is 100%.
Bootstrap support for H3F954 as seed ortholog is 100%.

Group of orthologs #937. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.pacificus:58

Q5KEK2              	100.00%		H3F661              	100.00%
Bootstrap support for Q5KEK2 as seed ortholog is 88%.
Bootstrap support for H3F661 as seed ortholog is 95%.

Group of orthologs #938. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.pacificus:129

Q5KPK3              	100.00%		H3DXW8              	100.00%
                    	       		H3EE33              	27.12%
Bootstrap support for Q5KPK3 as seed ortholog is 99%.
Bootstrap support for H3DXW8 as seed ortholog is 100%.

Group of orthologs #939. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.pacificus:129

P0CQ12              	100.00%		H3E9T9              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for H3E9T9 as seed ortholog is 100%.

Group of orthologs #940. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:37 P.pacificus:129

P0CR16              	100.00%		H3EDR6              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 99%.
Bootstrap support for H3EDR6 as seed ortholog is 100%.

Group of orthologs #941. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.pacificus:129

Q5K9N6              	100.00%		H3EB16              	100.00%
Bootstrap support for Q5K9N6 as seed ortholog is 100%.
Bootstrap support for H3EB16 as seed ortholog is 100%.

Group of orthologs #942. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.pacificus:129

Q5KIF5              	100.00%		H3FNC4              	100.00%
Bootstrap support for Q5KIF5 as seed ortholog is 100%.
Bootstrap support for H3FNC4 as seed ortholog is 100%.

Group of orthologs #943. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.pacificus:129

Q5KKM7              	100.00%		H3FRI5              	100.00%
Bootstrap support for Q5KKM7 as seed ortholog is 100%.
Bootstrap support for H3FRI5 as seed ortholog is 100%.

Group of orthologs #944. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:64

Q5K8Z0              	100.00%		H3FHM5              	100.00%
                    	       		H3FHD4              	40.81%
                    	       		H3FYC4              	39.86%
                    	       		H3FY78              	27.92%
                    	       		H3F5J8              	21.00%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for H3FHM5 as seed ortholog is 99%.

Group of orthologs #945. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:62

Q5KHB8              	100.00%		H3EQ18              	100.00%
Q5K7D6              	6.32%		H3FGR5              	53.24%
Bootstrap support for Q5KHB8 as seed ortholog is 100%.
Bootstrap support for H3EQ18 as seed ortholog is 99%.

Group of orthologs #946. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:71

Q5K9G2              	100.00%		H3EPQ0              	100.00%
                    	       		H3DWN5              	41.12%
Bootstrap support for Q5K9G2 as seed ortholog is 100%.
Bootstrap support for H3EPQ0 as seed ortholog is 96%.

Group of orthologs #947. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:65

Q5KN73              	100.00%		H3EBL2              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for H3EBL2 as seed ortholog is 99%.

Group of orthologs #948. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:128

Q5KPW7              	100.00%		H3EGX0              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for H3EGX0 as seed ortholog is 100%.

Group of orthologs #949. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:128

Q5KGU5              	100.00%		H3EXM1              	100.00%
Bootstrap support for Q5KGU5 as seed ortholog is 100%.
Bootstrap support for H3EXM1 as seed ortholog is 100%.

Group of orthologs #950. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.pacificus:128

Q5KA73              	100.00%		H3F7J1              	100.00%
Bootstrap support for Q5KA73 as seed ortholog is 99%.
Bootstrap support for H3F7J1 as seed ortholog is 100%.

Group of orthologs #951. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.pacificus:128

Q5KNE0              	100.00%		H3FZX9              	100.00%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for H3FZX9 as seed ortholog is 100%.

Group of orthologs #952. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.pacificus:8

Q5KFL8              	100.00%		H3G4V5              	100.00%
Q5KLI6              	7.52%		H3E0I9              	67.16%
                    	       		H3G4V0              	56.77%
                    	       		H3EZE4              	36.68%
                    	       		H3EMC8              	27.88%
                    	       		H3E869              	27.20%
                    	       		H3E8B4              	27.09%
                    	       		H3FVZ4              	25.28%
                    	       		H3EQC8              	23.70%
                    	       		H3F412              	21.67%
                    	       		H3EA92              	21.67%
                    	       		H3F3W2              	20.77%
                    	       		H3FPN2              	16.03%
                    	       		H3F2K6              	6.88%
Bootstrap support for Q5KFL8 as seed ortholog is 100%.
Bootstrap support for H3G4V5 as seed ortholog is 48%.
Alternative seed ortholog is H3EXZ5 (8 bits away from this cluster)

Group of orthologs #953. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.pacificus:127

Q5KD43              	100.00%		H3FNF3              	100.00%
Bootstrap support for Q5KD43 as seed ortholog is 100%.
Bootstrap support for H3FNF3 as seed ortholog is 100%.

Group of orthologs #954. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:2 P.pacificus:126

Q5KJC7              	100.00%		H3FI52              	100.00%
                    	       		H3FH19              	53.80%
                    	       		H3E851              	53.26%
                    	       		H3DZ79              	39.14%
                    	       		H3FI51              	37.01%
                    	       		H3E850              	23.53%
                    	       		H3FI46              	20.53%
                    	       		H3E808              	19.89%
                    	       		H3FP59              	7.81%
Bootstrap support for Q5KJC7 as seed ortholog is 47%.
Alternative seed ortholog is Q5KEH9 (2 bits away from this cluster)
Bootstrap support for H3FI52 as seed ortholog is 100%.

Group of orthologs #955. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.pacificus:65

P0CM54              	100.00%		H3F956              	100.00%
                    	       		H3EPY9              	81.42%
Bootstrap support for P0CM54 as seed ortholog is 100%.
Bootstrap support for H3F956 as seed ortholog is 99%.

Group of orthologs #956. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:28 P.pacificus:74

Q5KQ41              	100.00%		H3DY25              	100.00%
Bootstrap support for Q5KQ41 as seed ortholog is 88%.
Bootstrap support for H3DY25 as seed ortholog is 99%.

Group of orthologs #957. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:36 P.pacificus:34

Q5KPY2              	100.00%		H3F5M6              	100.00%
Bootstrap support for Q5KPY2 as seed ortholog is 91%.
Bootstrap support for H3F5M6 as seed ortholog is 82%.

Group of orthologs #958. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.pacificus:3

Q5KE51              	100.00%		H3FM50              	100.00%
Bootstrap support for Q5KE51 as seed ortholog is 100%.
Bootstrap support for H3FM50 as seed ortholog is 46%.
Alternative seed ortholog is H3FS72 (3 bits away from this cluster)

Group of orthologs #959. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.pacificus:61

Q5KHA3              	100.00%		H3DSA2              	100.00%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for H3DSA2 as seed ortholog is 95%.

Group of orthologs #960. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.pacificus:125

P0CO38              	100.00%		H3EBA2              	100.00%
Bootstrap support for P0CO38 as seed ortholog is 100%.
Bootstrap support for H3EBA2 as seed ortholog is 100%.

Group of orthologs #961. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.pacificus:63

Q5KFF0              	100.00%		H3EKK6              	100.00%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for H3EKK6 as seed ortholog is 99%.

Group of orthologs #962. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:13

Q5K7B1              	100.00%		H3F1F8              	100.00%
                    	       		H3ED53              	45.13%
                    	       		H3F9E3              	15.77%
Bootstrap support for Q5K7B1 as seed ortholog is 100%.
Bootstrap support for H3F1F8 as seed ortholog is 63%.
Alternative seed ortholog is H3E319 (13 bits away from this cluster)

Group of orthologs #963. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:124

Q5KA76              	100.00%		H3EFC6              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for H3EFC6 as seed ortholog is 100%.

Group of orthologs #964. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:124

Q5K8L4              	100.00%		H3EPD9              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for H3EPD9 as seed ortholog is 100%.

Group of orthologs #965. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:124

Q5KEA3              	100.00%		H3F2G8              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for H3F2G8 as seed ortholog is 100%.

Group of orthologs #966. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:124

Q5KLM7              	100.00%		H3FCJ0              	100.00%
Bootstrap support for Q5KLM7 as seed ortholog is 100%.
Bootstrap support for H3FCJ0 as seed ortholog is 100%.

Group of orthologs #967. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.pacificus:27

Q5K6W6              	100.00%		H3G099              	100.00%
Bootstrap support for Q5K6W6 as seed ortholog is 99%.
Bootstrap support for H3G099 as seed ortholog is 56%.
Alternative seed ortholog is H3E9J7 (27 bits away from this cluster)

Group of orthologs #968. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.pacificus:124

Q5KH66              	100.00%		H3FRT0              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for H3FRT0 as seed ortholog is 100%.

Group of orthologs #969. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:123

P0CN04              	100.00%		H3EGK4              	100.00%
                    	       		H3DTG1              	72.34%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for H3EGK4 as seed ortholog is 100%.

Group of orthologs #970. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:123

Q5K9V0              	100.00%		H3DT00              	100.00%
Bootstrap support for Q5K9V0 as seed ortholog is 100%.
Bootstrap support for H3DT00 as seed ortholog is 100%.

Group of orthologs #971. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:23

Q5KFD2              	100.00%		H3DXJ6              	100.00%
Bootstrap support for Q5KFD2 as seed ortholog is 100%.
Bootstrap support for H3DXJ6 as seed ortholog is 15%.
Alternative seed ortholog is H3E9W4 (23 bits away from this cluster)

Group of orthologs #972. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:123

Q5KFF7              	100.00%		H3EW20              	100.00%
Bootstrap support for Q5KFF7 as seed ortholog is 100%.
Bootstrap support for H3EW20 as seed ortholog is 100%.

Group of orthologs #973. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:71

Q5KG23              	100.00%		H3F3E8              	100.00%
Bootstrap support for Q5KG23 as seed ortholog is 99%.
Bootstrap support for H3F3E8 as seed ortholog is 99%.

Group of orthologs #974. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:123

Q5KGJ8              	100.00%		H3FD82              	100.00%
Bootstrap support for Q5KGJ8 as seed ortholog is 100%.
Bootstrap support for H3FD82 as seed ortholog is 100%.

Group of orthologs #975. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:123

P0CN52              	100.00%		H3FSF1              	100.00%
Bootstrap support for P0CN52 as seed ortholog is 100%.
Bootstrap support for H3FSF1 as seed ortholog is 100%.

Group of orthologs #976. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.pacificus:11

Q5KGZ9              	100.00%		H3FT82              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for H3FT82 as seed ortholog is 56%.
Alternative seed ortholog is H3E471 (11 bits away from this cluster)

Group of orthologs #977. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.pacificus:73

Q5KNI7              	100.00%		H3E637              	100.00%
Bootstrap support for Q5KNI7 as seed ortholog is 100%.
Bootstrap support for H3E637 as seed ortholog is 99%.

Group of orthologs #978. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.pacificus:122

Q5KEW0              	100.00%		H3EGN5              	100.00%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for H3EGN5 as seed ortholog is 100%.

Group of orthologs #979. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.pacificus:122

Q5KKT8              	100.00%		H3F0Y0              	100.00%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for H3F0Y0 as seed ortholog is 100%.

Group of orthologs #980. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.pacificus:122

Q5KJJ9              	100.00%		H3F6U5              	100.00%
Bootstrap support for Q5KJJ9 as seed ortholog is 100%.
Bootstrap support for H3F6U5 as seed ortholog is 100%.

Group of orthologs #981. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.pacificus:55

Q5KH55              	100.00%		H3EC07              	100.00%
Bootstrap support for Q5KH55 as seed ortholog is 90%.
Bootstrap support for H3EC07 as seed ortholog is 90%.

Group of orthologs #982. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.pacificus:74

Q5KCA8              	100.00%		H3EPL6              	100.00%
Bootstrap support for Q5KCA8 as seed ortholog is 100%.
Bootstrap support for H3EPL6 as seed ortholog is 99%.

Group of orthologs #983. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:13

Q5KJK0              	100.00%		H3F4N6              	100.00%
Bootstrap support for Q5KJK0 as seed ortholog is 99%.
Bootstrap support for H3F4N6 as seed ortholog is 76%.

Group of orthologs #984. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:33 P.pacificus:121

Q5KD47              	100.00%		H3FT00              	100.00%
Bootstrap support for Q5KD47 as seed ortholog is 63%.
Alternative seed ortholog is Q5KEG9 (33 bits away from this cluster)
Bootstrap support for H3FT00 as seed ortholog is 100%.

Group of orthologs #985. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.pacificus:121

Q5KMG9              	100.00%		H3FSB8              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for H3FSB8 as seed ortholog is 100%.

Group of orthologs #986. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.pacificus:121

Q5KIN8              	100.00%		H3FWD0              	100.00%
Bootstrap support for Q5KIN8 as seed ortholog is 100%.
Bootstrap support for H3FWD0 as seed ortholog is 100%.

Group of orthologs #987. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.pacificus:120

Q5KAJ2              	100.00%		H3F3F7              	100.00%
                    	       		H3F3F0              	48.86%
Bootstrap support for Q5KAJ2 as seed ortholog is 100%.
Bootstrap support for H3F3F7 as seed ortholog is 100%.

Group of orthologs #988. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.pacificus:120

Q5KHN0              	100.00%		H3F3U6              	100.00%
                    	       		H3EGZ8              	99.32%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for H3F3U6 as seed ortholog is 100%.

Group of orthologs #989. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.pacificus:120

Q5KA81              	100.00%		H3E9S1              	100.00%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for H3E9S1 as seed ortholog is 100%.

Group of orthologs #990. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.pacificus:120

Q5KN25              	100.00%		H3F4X1              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for H3F4X1 as seed ortholog is 100%.

Group of orthologs #991. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.pacificus:25

Q5KIP0              	100.00%		H3FGH3              	100.00%
Q5KJ03              	12.20%		H3FZ51              	76.26%
                    	       		H3EME8              	68.69%
                    	       		H3E1Y6              	64.90%
                    	       		H3EMF1              	64.14%
                    	       		H3EMF2              	62.63%
                    	       		H3EME1              	53.79%
                    	       		H3FH21              	53.79%
                    	       		H3FPH9              	51.52%
                    	       		H3EMF0              	51.01%
                    	       		H3E7X5              	49.75%
                    	       		H3EWR7              	49.24%
                    	       		H3EWR6              	44.19%
                    	       		H3FZC4              	43.43%
                    	       		H3EMX4              	23.74%
                    	       		H3FLR4              	16.67%
                    	       		H3E635              	11.36%
Bootstrap support for Q5KIP0 as seed ortholog is 73%.
Alternative seed ortholog is Q5KML8 (24 bits away from this cluster)
Bootstrap support for H3FGH3 as seed ortholog is 77%.

Group of orthologs #992. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:38

Q5KLB1              	100.00%		H3EUH1              	100.00%
                    	       		H3E0Z5              	69.15%
                    	       		H3EUG9              	56.11%
                    	       		H3E017              	50.31%
                    	       		H3EMK4              	17.18%
                    	       		H3FLP6              	15.94%
                    	       		H3FCW8              	13.66%
                    	       		H3E7Y9              	13.25%
                    	       		H3EMH0              	12.84%
                    	       		H3E7Z1              	9.73%
                    	       		H3EC32              	8.90%
Bootstrap support for Q5KLB1 as seed ortholog is 100%.
Bootstrap support for H3EUH1 as seed ortholog is 82%.

Group of orthologs #993. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5KJL6              	100.00%		H3ELM9              	100.00%
                    	       		H3EFK7              	30.11%
                    	       		H3FY47              	26.14%
                    	       		H3E064              	25.00%
                    	       		H3F2X9              	23.30%
                    	       		H3EG99              	21.02%
                    	       		H3G4C3              	15.34%
                    	       		H3F2Y0              	10.23%
                    	       		H3E993              	5.68%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for H3ELM9 as seed ortholog is 100%.

Group of orthologs #994. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5KPM5              	100.00%		H3FFB3              	100.00%
Q5KAF6              	33.90%		H3F8L2              	26.07%
Bootstrap support for Q5KPM5 as seed ortholog is 100%.
Bootstrap support for H3FFB3 as seed ortholog is 100%.

Group of orthologs #995. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5KQ14              	100.00%		H3FMY0              	100.00%
                    	       		H3EAE9              	71.04%
Bootstrap support for Q5KQ14 as seed ortholog is 100%.
Bootstrap support for H3FMY0 as seed ortholog is 100%.

Group of orthologs #996. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

P0CP64              	100.00%		H3EK10              	100.00%
Bootstrap support for P0CP64 as seed ortholog is 100%.
Bootstrap support for H3EK10 as seed ortholog is 100%.

Group of orthologs #997. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5KIE2              	100.00%		H3F3Z7              	100.00%
Bootstrap support for Q5KIE2 as seed ortholog is 100%.
Bootstrap support for H3F3Z7 as seed ortholog is 100%.

Group of orthologs #998. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5K9B4              	100.00%		H3FC85              	100.00%
Bootstrap support for Q5K9B4 as seed ortholog is 100%.
Bootstrap support for H3FC85 as seed ortholog is 100%.

Group of orthologs #999. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5KL46              	100.00%		H3F1N4              	100.00%
Bootstrap support for Q5KL46 as seed ortholog is 100%.
Bootstrap support for H3F1N4 as seed ortholog is 100%.

Group of orthologs #1000. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 P.pacificus:119

Q5K8X7              	100.00%		H3FG06              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for H3FG06 as seed ortholog is 100%.

Group of orthologs #1001. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:54

P0CR34              	100.00%		H3FRB1              	100.00%
                    	       		H3EUG8              	53.01%
                    	       		H3EUG0              	52.24%
                    	       		H3E780              	46.37%
                    	       		H3FGN3              	25.19%
                    	       		H3FGN2              	12.83%
Bootstrap support for P0CR34 as seed ortholog is 92%.
Bootstrap support for H3FRB1 as seed ortholog is 91%.

Group of orthologs #1002. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.pacificus:21

Q5KLC5              	100.00%		H3F5H3              	100.00%
                    	       		H3F5H9              	47.28%
                    	       		H3EDE9              	12.77%
                    	       		H3EDF0              	7.09%
Bootstrap support for Q5KLC5 as seed ortholog is 88%.
Bootstrap support for H3F5H3 as seed ortholog is 73%.
Alternative seed ortholog is H3F7N4 (21 bits away from this cluster)

Group of orthologs #1003. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.pacificus:118

Q5KDU6              	100.00%		A6YNH6              	100.00%
                    	       		H3EID5              	66.67%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for A6YNH6 as seed ortholog is 100%.

Group of orthologs #1004. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:38 P.pacificus:50

Q5KB48              	100.00%		H3FJZ4              	100.00%
                    	       		H3G4V7              	67.02%
Bootstrap support for Q5KB48 as seed ortholog is 87%.
Bootstrap support for H3FJZ4 as seed ortholog is 92%.

Group of orthologs #1005. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.pacificus:118

Q5KEP7              	100.00%		H3FJZ0              	100.00%
Bootstrap support for Q5KEP7 as seed ortholog is 100%.
Bootstrap support for H3FJZ0 as seed ortholog is 100%.

Group of orthologs #1006. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 P.pacificus:118

Q5KKE8              	100.00%		H3FN80              	100.00%
Bootstrap support for Q5KKE8 as seed ortholog is 100%.
Bootstrap support for H3FN80 as seed ortholog is 100%.

Group of orthologs #1007. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.pacificus:117

Q5K9A1              	100.00%		H3G172              	100.00%
Q5KMB5              	5.82%		
Bootstrap support for Q5K9A1 as seed ortholog is 100%.
Bootstrap support for H3G172 as seed ortholog is 100%.

Group of orthologs #1008. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.pacificus:117

Q5KG39              	100.00%		H3EY11              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for H3EY11 as seed ortholog is 100%.

Group of orthologs #1009. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.pacificus:117

Q5KPF3              	100.00%		H3F8X0              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for H3F8X0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:116

Q5KGH7              	100.00%		H3E8I8              	100.00%
Q5KGH9              	45.97%		H3FRQ7              	18.87%
Q5KGH8              	44.25%		H3G108              	15.81%
                    	       		H3FNZ3              	8.71%
Bootstrap support for Q5KGH7 as seed ortholog is 100%.
Bootstrap support for H3E8I8 as seed ortholog is 100%.

Group of orthologs #1011. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:116

Q5KGD2              	100.00%		H3FRF7              	100.00%
Q5KID2              	30.92%		
Bootstrap support for Q5KGD2 as seed ortholog is 100%.
Bootstrap support for H3FRF7 as seed ortholog is 100%.

Group of orthologs #1012. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:33 P.pacificus:116

P0CP94              	100.00%		H3E1E6              	100.00%
Bootstrap support for P0CP94 as seed ortholog is 97%.
Bootstrap support for H3E1E6 as seed ortholog is 100%.

Group of orthologs #1013. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:116

Q5KJP2              	100.00%		H3DVW9              	100.00%
Bootstrap support for Q5KJP2 as seed ortholog is 100%.
Bootstrap support for H3DVW9 as seed ortholog is 100%.

Group of orthologs #1014. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:116

Q5KP56              	100.00%		H3DVH0              	100.00%
Bootstrap support for Q5KP56 as seed ortholog is 100%.
Bootstrap support for H3DVH0 as seed ortholog is 100%.

Group of orthologs #1015. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.pacificus:116

Q5KF63              	100.00%		H3F1N2              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for H3F1N2 as seed ortholog is 100%.

Group of orthologs #1016. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.pacificus:115

Q5KG66              	100.00%		H3FXL4              	100.00%
                    	       		H3EAX6              	27.99%
                    	       		H3FRY5              	13.31%
                    	       		H3FBS7              	5.80%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for H3FXL4 as seed ortholog is 100%.

Group of orthologs #1017. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.pacificus:115

P0CM42              	100.00%		H3E1L0              	100.00%
                    	       		H3FV65              	24.31%
Bootstrap support for P0CM42 as seed ortholog is 100%.
Bootstrap support for H3E1L0 as seed ortholog is 100%.

Group of orthologs #1018. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.pacificus:115

Q5K7R1              	100.00%		H3FNT1              	100.00%
Bootstrap support for Q5K7R1 as seed ortholog is 100%.
Bootstrap support for H3FNT1 as seed ortholog is 100%.

Group of orthologs #1019. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.pacificus:114

Q5KF12              	100.00%		H3EQX2              	100.00%
                    	       		H3EDD6              	47.33%
                    	       		H3EZQ2              	28.41%
                    	       		H3F3P3              	8.47%
                    	       		H3EQ91              	7.60%
                    	       		H3EJ37              	7.52%
                    	       		H3E9X3              	6.57%
Bootstrap support for Q5KF12 as seed ortholog is 100%.
Bootstrap support for H3EQX2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.pacificus:114

Q5KG95              	100.00%		H3FVD5              	100.00%
Q5KAX2              	100.00%		H3FVF8              	100.00%
                    	       		H3E158              	34.94%
                    	       		H3FUG3              	24.05%
                    	       		H3F6L0              	5.51%
Bootstrap support for Q5KG95 as seed ortholog is 100%.
Bootstrap support for Q5KAX2 as seed ortholog is 100%.
Bootstrap support for H3FVD5 as seed ortholog is 100%.
Bootstrap support for H3FVF8 as seed ortholog is 100%.

Group of orthologs #1021. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:51

Q5K8L2              	100.00%		H3DW58              	100.00%
                    	       		H3DW59              	61.12%
                    	       		H3DW57              	56.78%
                    	       		H3FKB6              	13.20%
                    	       		H3FS18              	8.86%
Bootstrap support for Q5K8L2 as seed ortholog is 87%.
Bootstrap support for H3DW58 as seed ortholog is 87%.

Group of orthologs #1022. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.pacificus:114

Q5KF11              	100.00%		H3EFQ4              	100.00%
Bootstrap support for Q5KF11 as seed ortholog is 100%.
Bootstrap support for H3EFQ4 as seed ortholog is 100%.

Group of orthologs #1023. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.pacificus:114

Q5KNI2              	100.00%		H3ELJ9              	100.00%
Bootstrap support for Q5KNI2 as seed ortholog is 100%.
Bootstrap support for H3ELJ9 as seed ortholog is 100%.

Group of orthologs #1024. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.pacificus:114

Q5KAR1              	100.00%		H3F7K7              	100.00%
Bootstrap support for Q5KAR1 as seed ortholog is 100%.
Bootstrap support for H3F7K7 as seed ortholog is 100%.

Group of orthologs #1025. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.pacificus:113

Q5KKQ1              	100.00%		H3ECX3              	100.00%
Bootstrap support for Q5KKQ1 as seed ortholog is 100%.
Bootstrap support for H3ECX3 as seed ortholog is 100%.

Group of orthologs #1026. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.pacificus:113

Q5KN51              	100.00%		H3ESN4              	100.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for H3ESN4 as seed ortholog is 100%.

Group of orthologs #1027. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.pacificus:113

P0CR76              	100.00%		H3FKB7              	100.00%
Bootstrap support for P0CR76 as seed ortholog is 100%.
Bootstrap support for H3FKB7 as seed ortholog is 100%.

Group of orthologs #1028. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.pacificus:113

Q5KIG2              	100.00%		H3FZP8              	100.00%
Bootstrap support for Q5KIG2 as seed ortholog is 100%.
Bootstrap support for H3FZP8 as seed ortholog is 100%.

Group of orthologs #1029. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.pacificus:2

Q5KMN4              	100.00%		H3F4P8              	100.00%
                    	       		H3FBB1              	11.93%
                    	       		H3FAV5              	10.06%
                    	       		H3FDU5              	9.34%
                    	       		H3EWX4              	8.05%
                    	       		H3EP52              	7.18%
Bootstrap support for Q5KMN4 as seed ortholog is 100%.
Bootstrap support for H3F4P8 as seed ortholog is 55%.
Alternative seed ortholog is H3F5X5 (2 bits away from this cluster)

Group of orthologs #1030. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.pacificus:112

Q5K8D6              	100.00%		H3EIW5              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for H3EIW5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:34 P.pacificus:112

Q5K7J7              	100.00%		H3EWQ4              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 80%.
Bootstrap support for H3EWQ4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:112

Q5KJ91              	100.00%		H3ELU7              	100.00%
Bootstrap support for Q5KJ91 as seed ortholog is 91%.
Bootstrap support for H3ELU7 as seed ortholog is 100%.

Group of orthologs #1033. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.pacificus:112

Q5KPC0              	100.00%		H3EIY2              	100.00%
Bootstrap support for Q5KPC0 as seed ortholog is 100%.
Bootstrap support for H3EIY2 as seed ortholog is 100%.

Group of orthologs #1034. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.pacificus:112

Q5KLK0              	100.00%		H3FCG9              	100.00%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for H3FCG9 as seed ortholog is 100%.

Group of orthologs #1035. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 P.pacificus:112

Q5K7E8              	100.00%		H3FRR0              	100.00%
Bootstrap support for Q5K7E8 as seed ortholog is 100%.
Bootstrap support for H3FRR0 as seed ortholog is 100%.

Group of orthologs #1036. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.pacificus:111

P0CS28              	100.00%		H3FAT2              	100.00%
                    	       		H3F9M3              	31.30%
Bootstrap support for P0CS28 as seed ortholog is 100%.
Bootstrap support for H3FAT2 as seed ortholog is 100%.

Group of orthologs #1037. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.pacificus:48

Q5KDV9              	100.00%		H3DW12              	100.00%
Bootstrap support for Q5KDV9 as seed ortholog is 100%.
Bootstrap support for H3DW12 as seed ortholog is 97%.

Group of orthologs #1038. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.pacificus:26

Q5KKY6              	100.00%		H3E9S5              	100.00%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for H3E9S5 as seed ortholog is 70%.
Alternative seed ortholog is H3EL26 (26 bits away from this cluster)

Group of orthologs #1039. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.pacificus:3

Q5KNW0              	100.00%		H3FDJ4              	100.00%
Bootstrap support for Q5KNW0 as seed ortholog is 100%.
Bootstrap support for H3FDJ4 as seed ortholog is 53%.
Alternative seed ortholog is H3F5W0 (3 bits away from this cluster)

Group of orthologs #1040. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.pacificus:110

Q5K8J3              	100.00%		H3ENC0              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for H3ENC0 as seed ortholog is 100%.

Group of orthologs #1041. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.pacificus:31

Q5KI73              	100.00%		H3FSE4              	100.00%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for H3FSE4 as seed ortholog is 94%.

Group of orthologs #1042. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.pacificus:110

Q5KLE1              	100.00%		H3FSW6              	100.00%
Bootstrap support for Q5KLE1 as seed ortholog is 100%.
Bootstrap support for H3FSW6 as seed ortholog is 100%.

Group of orthologs #1043. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.pacificus:50

Q5KIG3              	100.00%		H3E5B1              	100.00%
Q5KAW2              	10.23%		
Bootstrap support for Q5KIG3 as seed ortholog is 100%.
Bootstrap support for H3E5B1 as seed ortholog is 72%.
Alternative seed ortholog is H3DSL4 (50 bits away from this cluster)

Group of orthologs #1044. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.pacificus:109

P0CP06              	100.00%		H3EJ00              	100.00%
                    	       		H3EJ26              	65.58%
Bootstrap support for P0CP06 as seed ortholog is 100%.
Bootstrap support for H3EJ00 as seed ortholog is 100%.

Group of orthologs #1045. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.pacificus:109

Q5KG49              	100.00%		H3F4Z1              	100.00%
Q5KG50              	37.01%		
Bootstrap support for Q5KG49 as seed ortholog is 100%.
Bootstrap support for H3F4Z1 as seed ortholog is 100%.

Group of orthologs #1046. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:109

Q5KDS7              	100.00%		H3E9V2              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 99%.
Bootstrap support for H3E9V2 as seed ortholog is 100%.

Group of orthologs #1047. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.pacificus:109

Q5KL83              	100.00%		H3E8U8              	100.00%
Bootstrap support for Q5KL83 as seed ortholog is 100%.
Bootstrap support for H3E8U8 as seed ortholog is 100%.

Group of orthologs #1048. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 P.pacificus:109

Q5KKG8              	100.00%		H3EVA7              	100.00%
Bootstrap support for Q5KKG8 as seed ortholog is 100%.
Bootstrap support for H3EVA7 as seed ortholog is 100%.

Group of orthologs #1049. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.pacificus:108

Q5KGY5              	100.00%		H3EJW4              	100.00%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for H3EJW4 as seed ortholog is 100%.

Group of orthologs #1050. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.pacificus:108

Q5KD64              	100.00%		H3ESG9              	100.00%
Bootstrap support for Q5KD64 as seed ortholog is 100%.
Bootstrap support for H3ESG9 as seed ortholog is 100%.

Group of orthologs #1051. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.pacificus:54

Q5KGC6              	100.00%		H3FJG9              	100.00%
Bootstrap support for Q5KGC6 as seed ortholog is 100%.
Bootstrap support for H3FJG9 as seed ortholog is 94%.

Group of orthologs #1052. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.pacificus:12

Q5KK19              	100.00%		H3EZD8              	100.00%
                    	       		H3EZD7              	79.23%
                    	       		H3E7U2              	44.89%
                    	       		H3F406              	27.87%
                    	       		H3EZ42              	23.28%
                    	       		H3FVY9              	8.35%
                    	       		H3F407              	7.93%
                    	       		H3ER19              	6.37%
                    	       		H3F3S4              	5.95%
                    	       		H3E959              	5.85%
                    	       		H3G4W0              	5.74%
Bootstrap support for Q5KK19 as seed ortholog is 100%.
Bootstrap support for H3EZD8 as seed ortholog is 57%.
Alternative seed ortholog is H3EXZ5 (12 bits away from this cluster)

Group of orthologs #1053. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.pacificus:107

Q5KLF1              	100.00%		H3FQS8              	100.00%
                    	       		H3FF53              	21.29%
Bootstrap support for Q5KLF1 as seed ortholog is 88%.
Bootstrap support for H3FQS8 as seed ortholog is 100%.

Group of orthologs #1054. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.pacificus:107

Q5KDT1              	100.00%		H3EQS3              	100.00%
Bootstrap support for Q5KDT1 as seed ortholog is 100%.
Bootstrap support for H3EQS3 as seed ortholog is 100%.

Group of orthologs #1055. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.pacificus:107

Q5KIJ7              	100.00%		H3F3X1              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for H3F3X1 as seed ortholog is 100%.

Group of orthologs #1056. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:39 P.pacificus:62

Q5KGI3              	100.00%		H3F408              	100.00%
                    	       		H3F991              	5.04%
Bootstrap support for Q5KGI3 as seed ortholog is 96%.
Bootstrap support for H3F408 as seed ortholog is 98%.

Group of orthologs #1057. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:106

Q5KFB3              	100.00%		H3G2E6              	100.00%
                    	       		H3G2K5              	81.11%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for H3G2E6 as seed ortholog is 100%.

Group of orthologs #1058. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:2

Q5KBY8              	100.00%		H3E082              	100.00%
Bootstrap support for Q5KBY8 as seed ortholog is 100%.
Bootstrap support for H3E082 as seed ortholog is 69%.
Alternative seed ortholog is H3EJI4 (2 bits away from this cluster)

Group of orthologs #1059. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.pacificus:106

Q5KK58              	100.00%		H3EFX7              	100.00%
Bootstrap support for Q5KK58 as seed ortholog is 92%.
Bootstrap support for H3EFX7 as seed ortholog is 100%.

Group of orthologs #1060. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:106

Q5KCH8              	100.00%		H3EZ22              	100.00%
Bootstrap support for Q5KCH8 as seed ortholog is 100%.
Bootstrap support for H3EZ22 as seed ortholog is 100%.

Group of orthologs #1061. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:38

P0CS32              	100.00%		H3F8V3              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for H3F8V3 as seed ortholog is 86%.

Group of orthologs #1062. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:43

Q5K8T0              	100.00%		H3FCZ3              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for H3FCZ3 as seed ortholog is 95%.

Group of orthologs #1063. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.pacificus:27

Q5KF50              	100.00%		H3FNN4              	100.00%
Bootstrap support for Q5KF50 as seed ortholog is 100%.
Bootstrap support for H3FNN4 as seed ortholog is 76%.

Group of orthologs #1064. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.pacificus:105

Q5KLR5              	100.00%		H3FHI4              	100.00%
Q5K808              	34.43%		
Bootstrap support for Q5KLR5 as seed ortholog is 100%.
Bootstrap support for H3FHI4 as seed ortholog is 100%.

Group of orthologs #1065. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.pacificus:105

Q5K6V7              	100.00%		H3EAM4              	100.00%
Bootstrap support for Q5K6V7 as seed ortholog is 100%.
Bootstrap support for H3EAM4 as seed ortholog is 100%.

Group of orthologs #1066. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:34 P.pacificus:105

P0CL96              	100.00%		H3EIW7              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 94%.
Bootstrap support for H3EIW7 as seed ortholog is 100%.

Group of orthologs #1067. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.pacificus:105

Q5KHU0              	100.00%		H3F6E8              	100.00%
Bootstrap support for Q5KHU0 as seed ortholog is 100%.
Bootstrap support for H3F6E8 as seed ortholog is 100%.

Group of orthologs #1068. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.pacificus:105

P0CL90              	100.00%		H3FL04              	100.00%
Bootstrap support for P0CL90 as seed ortholog is 100%.
Bootstrap support for H3FL04 as seed ortholog is 100%.

Group of orthologs #1069. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.pacificus:105

Q5KCA1              	100.00%		H3FHG7              	100.00%
Bootstrap support for Q5KCA1 as seed ortholog is 100%.
Bootstrap support for H3FHG7 as seed ortholog is 100%.

Group of orthologs #1070. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 P.pacificus:105

Q5K802              	100.00%		H3FT58              	100.00%
Bootstrap support for Q5K802 as seed ortholog is 100%.
Bootstrap support for H3FT58 as seed ortholog is 100%.

Group of orthologs #1071. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KDJ5              	100.00%		H3FH09              	100.00%
                    	       		H3G1I0              	53.67%
                    	       		H3FPH2              	40.86%
                    	       		H3FPG9              	37.99%
                    	       		H3EWA8              	36.69%
                    	       		H3FGN1              	34.68%
                    	       		H3FEV8              	23.45%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for H3FH09 as seed ortholog is 100%.

Group of orthologs #1072. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KE31              	100.00%		H3F2A8              	100.00%
Q5KB15              	26.48%		
Bootstrap support for Q5KE31 as seed ortholog is 100%.
Bootstrap support for H3F2A8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5K7I7              	100.00%		H3DYV2              	100.00%
Bootstrap support for Q5K7I7 as seed ortholog is 100%.
Bootstrap support for H3DYV2 as seed ortholog is 100%.

Group of orthologs #1074. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KAU6              	100.00%		H3EK57              	100.00%
Bootstrap support for Q5KAU6 as seed ortholog is 100%.
Bootstrap support for H3EK57 as seed ortholog is 100%.

Group of orthologs #1075. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KP16              	100.00%		H3EIX0              	100.00%
Bootstrap support for Q5KP16 as seed ortholog is 100%.
Bootstrap support for H3EIX0 as seed ortholog is 100%.

Group of orthologs #1076. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KIC8              	100.00%		H3F651              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for H3F651 as seed ortholog is 100%.

Group of orthologs #1077. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KKN5              	100.00%		H3F5Q7              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for H3F5Q7 as seed ortholog is 100%.

Group of orthologs #1078. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5K909              	100.00%		H3FK66              	100.00%
Bootstrap support for Q5K909 as seed ortholog is 100%.
Bootstrap support for H3FK66 as seed ortholog is 100%.

Group of orthologs #1079. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KMS2              	100.00%		H3FFR1              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for H3FFR1 as seed ortholog is 100%.

Group of orthologs #1080. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KKF3              	100.00%		H3FVT2              	100.00%
Bootstrap support for Q5KKF3 as seed ortholog is 100%.
Bootstrap support for H3FVT2 as seed ortholog is 100%.

Group of orthologs #1081. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 P.pacificus:104

Q5KNF1              	100.00%		H3G370              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for H3G370 as seed ortholog is 100%.

Group of orthologs #1082. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.pacificus:103

Q5K7I8              	100.00%		H3FNU0              	100.00%
Bootstrap support for Q5K7I8 as seed ortholog is 100%.
Bootstrap support for H3FNU0 as seed ortholog is 100%.

Group of orthologs #1083. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:54

Q5KCD7              	100.00%		H3ENU6              	100.00%
                    	       		H3ENU7              	36.51%
Bootstrap support for Q5KCD7 as seed ortholog is 100%.
Bootstrap support for H3ENU6 as seed ortholog is 96%.

Group of orthologs #1084. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

Q5KCG2              	100.00%		H3FM95              	100.00%
                    	       		H3FM94              	6.56%
Bootstrap support for Q5KCG2 as seed ortholog is 100%.
Bootstrap support for H3FM95 as seed ortholog is 100%.

Group of orthologs #1085. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

P0CM10              	100.00%		H3DX18              	100.00%
Bootstrap support for P0CM10 as seed ortholog is 100%.
Bootstrap support for H3DX18 as seed ortholog is 100%.

Group of orthologs #1086. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

Q5KB39              	100.00%		H3ERC4              	100.00%
Bootstrap support for Q5KB39 as seed ortholog is 100%.
Bootstrap support for H3ERC4 as seed ortholog is 100%.

Group of orthologs #1087. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

Q5KPG4              	100.00%		H3EI74              	100.00%
Bootstrap support for Q5KPG4 as seed ortholog is 100%.
Bootstrap support for H3EI74 as seed ortholog is 100%.

Group of orthologs #1088. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:5

Q5K9P3              	100.00%		H3FCJ7              	100.00%
Bootstrap support for Q5K9P3 as seed ortholog is 100%.
Bootstrap support for H3FCJ7 as seed ortholog is 78%.

Group of orthologs #1089. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

Q5KBG4              	100.00%		H3FCG1              	100.00%
Bootstrap support for Q5KBG4 as seed ortholog is 100%.
Bootstrap support for H3FCG1 as seed ortholog is 100%.

Group of orthologs #1090. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

Q5KHY4              	100.00%		H3F6R8              	100.00%
Bootstrap support for Q5KHY4 as seed ortholog is 100%.
Bootstrap support for H3F6R8 as seed ortholog is 100%.

Group of orthologs #1091. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.pacificus:102

Q5KPS3              	100.00%		H3FT95              	100.00%
Bootstrap support for Q5KPS3 as seed ortholog is 100%.
Bootstrap support for H3FT95 as seed ortholog is 100%.

Group of orthologs #1092. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.pacificus:101

Q5KMG8              	100.00%		H3DZQ5              	100.00%
Q5K9L7              	54.44%		
Q5KJD3              	5.66%		
Bootstrap support for Q5KMG8 as seed ortholog is 100%.
Bootstrap support for H3DZQ5 as seed ortholog is 100%.

Group of orthologs #1093. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.pacificus:101

Q5KJK3              	100.00%		H3EI98              	100.00%
                    	       		H3F9B1              	50.38%
Bootstrap support for Q5KJK3 as seed ortholog is 100%.
Bootstrap support for H3EI98 as seed ortholog is 100%.

Group of orthologs #1094. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.pacificus:101

Q5KEZ5              	100.00%		H3FW30              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for H3FW30 as seed ortholog is 100%.

Group of orthologs #1095. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:17 P.pacificus:41

Q5KCS6              	100.00%		H3F5E6              	100.00%
                    	       		H3F5E7              	68.04%
                    	       		H3ESK6              	60.22%
                    	       		H3F5E5              	55.22%
                    	       		H3EPA3              	49.13%
                    	       		H3G4D4              	43.70%
                    	       		H3FZC3              	15.65%
                    	       		H3EN08              	15.43%
Bootstrap support for Q5KCS6 as seed ortholog is 74%.
Alternative seed ortholog is Q5KML8 (17 bits away from this cluster)
Bootstrap support for H3F5E6 as seed ortholog is 96%.

Group of orthologs #1096. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.pacificus:100

Q5K900              	100.00%		H3DRI2              	100.00%
Bootstrap support for Q5K900 as seed ortholog is 99%.
Bootstrap support for H3DRI2 as seed ortholog is 100%.

Group of orthologs #1097. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.pacificus:100

Q5KMB4              	100.00%		H3DSE9              	100.00%
Bootstrap support for Q5KMB4 as seed ortholog is 95%.
Bootstrap support for H3DSE9 as seed ortholog is 100%.

Group of orthologs #1098. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.pacificus:100

P0CN72              	100.00%		H3F848              	100.00%
Bootstrap support for P0CN72 as seed ortholog is 66%.
Alternative seed ortholog is Q5KHV8 (11 bits away from this cluster)
Bootstrap support for H3F848 as seed ortholog is 100%.

Group of orthologs #1099. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.pacificus:100

Q5KNW3              	100.00%		H3FKA3              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 100%.
Bootstrap support for H3FKA3 as seed ortholog is 100%.

Group of orthologs #1100. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.pacificus:99

Q5KNP8              	100.00%		H3G2L0              	100.00%
                    	       		H3EAA4              	30.18%
                    	       		H3EWN3              	26.26%
                    	       		H3G2L2              	25.28%
                    	       		H3E9F2              	23.44%
                    	       		H3G2L1              	20.25%
                    	       		H3F7N3              	17.55%
                    	       		H3EE29              	15.34%
                    	       		H3FUW4              	15.34%
                    	       		H3F3I4              	14.11%
                    	       		H3ETA9              	13.50%
                    	       		H3DZ26              	12.88%
                    	       		H3DT56              	12.02%
                    	       		H3FGQ7              	12.02%
                    	       		H3F1V4              	11.53%
                    	       		H3EE31              	11.04%
                    	       		H3E7X6              	8.96%
                    	       		H3G4T5              	8.83%
                    	       		H3FVZ9              	7.85%
                    	       		H3F7S9              	6.63%
                    	       		H3F389              	6.50%
                    	       		H3FLT1              	6.01%
                    	       		H3FLS1              	5.77%
Bootstrap support for Q5KNP8 as seed ortholog is 100%.
Bootstrap support for H3G2L0 as seed ortholog is 100%.

Group of orthologs #1101. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.pacificus:99

Q5KFY9              	100.00%		H3EIH7              	100.00%
                    	       		H3EIH6              	12.35%
                    	       		H3F3H3              	11.15%
                    	       		H3FJQ3              	10.51%
                    	       		H3FJP8              	9.77%
                    	       		H3E1J7              	7.10%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for H3EIH7 as seed ortholog is 100%.

Group of orthologs #1102. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.pacificus:53

Q5KMQ6              	100.00%		H3EB21              	100.00%
                    	       		H3E392              	17.02%
Bootstrap support for Q5KMQ6 as seed ortholog is 100%.
Bootstrap support for H3EB21 as seed ortholog is 92%.

Group of orthologs #1103. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:30 P.pacificus:99

Q5KC60              	100.00%		H3EBD5              	100.00%
Bootstrap support for Q5KC60 as seed ortholog is 100%.
Bootstrap support for H3EBD5 as seed ortholog is 100%.

Group of orthologs #1104. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.pacificus:99

Q5KC59              	100.00%		H3FSJ4              	100.00%
Bootstrap support for Q5KC59 as seed ortholog is 100%.
Bootstrap support for H3FSJ4 as seed ortholog is 100%.

Group of orthologs #1105. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.pacificus:98

Q5KP02              	100.00%		H3EE37              	100.00%
                    	       		H3EQ51              	61.11%
                    	       		H3F8G4              	60.51%
                    	       		H3E6V5              	53.90%
                    	       		H3E0N8              	47.00%
                    	       		H3G3Y3              	42.19%
                    	       		H3E8A9              	29.13%
                    	       		H3E6V4              	22.22%
                    	       		H3FW24              	14.26%
                    	       		H3DRP4              	11.26%
                    	       		H3DSW3              	9.61%
Bootstrap support for Q5KP02 as seed ortholog is 100%.
Bootstrap support for H3EE37 as seed ortholog is 100%.

Group of orthologs #1106. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.pacificus:98

Q5KM39              	100.00%		H3DYL8              	100.00%
Bootstrap support for Q5KM39 as seed ortholog is 100%.
Bootstrap support for H3DYL8 as seed ortholog is 100%.

Group of orthologs #1107. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.pacificus:55

Q5KJC4              	100.00%		H3E4W3              	100.00%
Bootstrap support for Q5KJC4 as seed ortholog is 100%.
Bootstrap support for H3E4W3 as seed ortholog is 94%.

Group of orthologs #1108. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 P.pacificus:98

Q5KKG1              	100.00%		H3ETQ0              	100.00%
Bootstrap support for Q5KKG1 as seed ortholog is 100%.
Bootstrap support for H3ETQ0 as seed ortholog is 100%.

Group of orthologs #1109. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5KH47              	100.00%		H3EC24              	100.00%
Q5KH57              	29.76%		
Bootstrap support for Q5KH47 as seed ortholog is 100%.
Bootstrap support for H3EC24 as seed ortholog is 100%.

Group of orthologs #1110. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

P0CO44              	100.00%		H3DV10              	100.00%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for H3DV10 as seed ortholog is 100%.

Group of orthologs #1111. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5K8P8              	100.00%		H3EHQ2              	100.00%
Bootstrap support for Q5K8P8 as seed ortholog is 100%.
Bootstrap support for H3EHQ2 as seed ortholog is 100%.

Group of orthologs #1112. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5KH50              	100.00%		H3EJG6              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for H3EJG6 as seed ortholog is 100%.

Group of orthologs #1113. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5KNF9              	100.00%		H3EQS1              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for H3EQS1 as seed ortholog is 100%.

Group of orthologs #1114. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5KL25              	100.00%		H3EV62              	100.00%
Bootstrap support for Q5KL25 as seed ortholog is 100%.
Bootstrap support for H3EV62 as seed ortholog is 100%.

Group of orthologs #1115. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5KL32              	100.00%		H3F3T3              	100.00%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for H3F3T3 as seed ortholog is 100%.

Group of orthologs #1116. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:12 P.pacificus:97

Q5KF20              	100.00%		H3FNF0              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 63%.
Alternative seed ortholog is Q5KQ60 (12 bits away from this cluster)
Bootstrap support for H3FNF0 as seed ortholog is 100%.

Group of orthologs #1117. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.pacificus:97

Q5KHF0              	100.00%		H3G3H2              	100.00%
Bootstrap support for Q5KHF0 as seed ortholog is 100%.
Bootstrap support for H3G3H2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.pacificus:96

Q5KI04              	100.00%		H3DWR9              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for H3DWR9 as seed ortholog is 100%.

Group of orthologs #1119. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.pacificus:96

Q5K8V4              	100.00%		H3F654              	100.00%
Bootstrap support for Q5K8V4 as seed ortholog is 100%.
Bootstrap support for H3F654 as seed ortholog is 100%.

Group of orthologs #1120. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.pacificus:96

Q5KE26              	100.00%		H3F2G3              	100.00%
Bootstrap support for Q5KE26 as seed ortholog is 100%.
Bootstrap support for H3F2G3 as seed ortholog is 100%.

Group of orthologs #1121. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.pacificus:96

Q5KME4              	100.00%		H3EWB0              	100.00%
Bootstrap support for Q5KME4 as seed ortholog is 100%.
Bootstrap support for H3EWB0 as seed ortholog is 100%.

Group of orthologs #1122. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.pacificus:96

Q5K811              	100.00%		H3FM75              	100.00%
Bootstrap support for Q5K811 as seed ortholog is 100%.
Bootstrap support for H3FM75 as seed ortholog is 100%.

Group of orthologs #1123. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.pacificus:95

Q5KDK4              	100.00%		H3DTU3              	100.00%
Bootstrap support for Q5KDK4 as seed ortholog is 100%.
Bootstrap support for H3DTU3 as seed ortholog is 100%.

Group of orthologs #1124. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.pacificus:95

P0CM76              	100.00%		H3ENI2              	100.00%
Bootstrap support for P0CM76 as seed ortholog is 100%.
Bootstrap support for H3ENI2 as seed ortholog is 100%.

Group of orthologs #1125. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.pacificus:95

Q5KAW3              	100.00%		H3FMA4              	100.00%
Bootstrap support for Q5KAW3 as seed ortholog is 100%.
Bootstrap support for H3FMA4 as seed ortholog is 100%.

Group of orthologs #1126. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.pacificus:94

Q5K7E4              	100.00%		H3FM74              	100.00%
Q5KFT6              	100.00%		H3EM37              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 100%.
Bootstrap support for Q5KFT6 as seed ortholog is 100%.
Bootstrap support for H3FM74 as seed ortholog is 100%.
Bootstrap support for H3EM37 as seed ortholog is 100%.

Group of orthologs #1127. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:6 P.pacificus:11

Q5KCU7              	100.00%		H3E690              	100.00%
Bootstrap support for Q5KCU7 as seed ortholog is 61%.
Alternative seed ortholog is Q5KI42 (6 bits away from this cluster)
Bootstrap support for H3E690 as seed ortholog is 68%.
Alternative seed ortholog is H3EPN0 (11 bits away from this cluster)

Group of orthologs #1128. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.pacificus:94

Q5K904              	100.00%		H3EQS9              	100.00%
Bootstrap support for Q5K904 as seed ortholog is 100%.
Bootstrap support for H3EQS9 as seed ortholog is 100%.

Group of orthologs #1129. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.pacificus:43

Q5KJW8              	100.00%		H3ENI3              	100.00%
Bootstrap support for Q5KJW8 as seed ortholog is 100%.
Bootstrap support for H3ENI3 as seed ortholog is 99%.

Group of orthologs #1130. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.pacificus:94

Q5KKR2              	100.00%		H3END9              	100.00%
Bootstrap support for Q5KKR2 as seed ortholog is 100%.
Bootstrap support for H3END9 as seed ortholog is 100%.

Group of orthologs #1131. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:26 P.pacificus:94

P0CR24              	100.00%		H3FF96              	100.00%
Bootstrap support for P0CR24 as seed ortholog is 97%.
Bootstrap support for H3FF96 as seed ortholog is 100%.

Group of orthologs #1132. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.pacificus:94

Q5KNX7              	100.00%		H3F7I9              	100.00%
Bootstrap support for Q5KNX7 as seed ortholog is 100%.
Bootstrap support for H3F7I9 as seed ortholog is 100%.

Group of orthologs #1133. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.pacificus:6

P0CN16              	100.00%		H3DTJ6              	100.00%
                    	       		H3ESG1              	10.90%
Bootstrap support for P0CN16 as seed ortholog is 100%.
Bootstrap support for H3DTJ6 as seed ortholog is 61%.
Alternative seed ortholog is H3EHR2 (6 bits away from this cluster)

Group of orthologs #1134. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.pacificus:93

Q5K7N6              	100.00%		H3DVF8              	100.00%
                    	       		H3DZJ8              	59.09%
Bootstrap support for Q5K7N6 as seed ortholog is 100%.
Bootstrap support for H3DVF8 as seed ortholog is 100%.

Group of orthologs #1135. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.pacificus:93

Q5KMP1              	100.00%		H3EIT9              	100.00%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for H3EIT9 as seed ortholog is 100%.

Group of orthologs #1136. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:30 P.pacificus:93

Q5K889              	100.00%		H3FDA2              	100.00%
Bootstrap support for Q5K889 as seed ortholog is 95%.
Bootstrap support for H3FDA2 as seed ortholog is 100%.

Group of orthologs #1137. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.pacificus:92

Q5KKE3              	100.00%		H3E2Y7              	100.00%
                    	       		H3E2Y6              	8.63%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for H3E2Y7 as seed ortholog is 100%.

Group of orthologs #1138. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.pacificus:92

Q5KC16              	100.00%		H3EVP9              	100.00%
                    	       		H3FJ09              	41.81%
Bootstrap support for Q5KC16 as seed ortholog is 100%.
Bootstrap support for H3EVP9 as seed ortholog is 100%.

Group of orthologs #1139. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.pacificus:92

Q5KCS0              	100.00%		H3DVF7              	100.00%
Bootstrap support for Q5KCS0 as seed ortholog is 100%.
Bootstrap support for H3DVF7 as seed ortholog is 100%.

Group of orthologs #1140. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.pacificus:92

Q5KAA6              	100.00%		H3EB18              	100.00%
Bootstrap support for Q5KAA6 as seed ortholog is 100%.
Bootstrap support for H3EB18 as seed ortholog is 100%.

Group of orthologs #1141. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.pacificus:92

Q5KGS8              	100.00%		H3FFZ4              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for H3FFZ4 as seed ortholog is 100%.

Group of orthologs #1142. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:14 P.pacificus:31

Q5KHP3              	100.00%		H3G2Z3              	100.00%
Bootstrap support for Q5KHP3 as seed ortholog is 55%.
Alternative seed ortholog is Q5KPY0 (14 bits away from this cluster)
Bootstrap support for H3G2Z3 as seed ortholog is 77%.

Group of orthologs #1143. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:91

Q5KEE1              	100.00%		A1BQ79              	100.00%
Bootstrap support for Q5KEE1 as seed ortholog is 100%.
Bootstrap support for A1BQ79 as seed ortholog is 100%.

Group of orthologs #1144. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:91

Q5KFF8              	100.00%		H3ELK5              	100.00%
Bootstrap support for Q5KFF8 as seed ortholog is 100%.
Bootstrap support for H3ELK5 as seed ortholog is 100%.

Group of orthologs #1145. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:37

Q5KN37              	100.00%		H3EEV6              	100.00%
Bootstrap support for Q5KN37 as seed ortholog is 100%.
Bootstrap support for H3EEV6 as seed ortholog is 96%.

Group of orthologs #1146. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:91

Q5KJN1              	100.00%		H3ENG4              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for H3ENG4 as seed ortholog is 100%.

Group of orthologs #1147. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:91

Q5KL91              	100.00%		H3EPL2              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for H3EPL2 as seed ortholog is 100%.

Group of orthologs #1148. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:91

P0CO56              	100.00%		H3FJG0              	100.00%
Bootstrap support for P0CO56 as seed ortholog is 100%.
Bootstrap support for H3FJG0 as seed ortholog is 100%.

Group of orthologs #1149. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.pacificus:91

Q5KIB6              	100.00%		H3F8I1              	100.00%
Bootstrap support for Q5KIB6 as seed ortholog is 100%.
Bootstrap support for H3F8I1 as seed ortholog is 100%.

Group of orthologs #1150. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:28 P.pacificus:90

Q5K856              	100.00%		H3EQF9              	100.00%
                    	       		H3EQF8              	57.65%
                    	       		H3EQG0              	54.21%
                    	       		H3EK68              	21.18%
                    	       		H3F1M0              	13.41%
Bootstrap support for Q5K856 as seed ortholog is 57%.
Alternative seed ortholog is Q5KEP3 (28 bits away from this cluster)
Bootstrap support for H3EQF9 as seed ortholog is 100%.

Group of orthologs #1151. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.pacificus:90

P0CO54              	100.00%		H3DW53              	100.00%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for H3DW53 as seed ortholog is 100%.

Group of orthologs #1152. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.pacificus:90

Q5KL38              	100.00%		H3EE89              	100.00%
Bootstrap support for Q5KL38 as seed ortholog is 100%.
Bootstrap support for H3EE89 as seed ortholog is 100%.

Group of orthologs #1153. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.pacificus:90

Q5KI22              	100.00%		H3EHB1              	100.00%
Bootstrap support for Q5KI22 as seed ortholog is 100%.
Bootstrap support for H3EHB1 as seed ortholog is 100%.

Group of orthologs #1154. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.pacificus:90

Q5K8A6              	100.00%		H3FRK3              	100.00%
Bootstrap support for Q5K8A6 as seed ortholog is 100%.
Bootstrap support for H3FRK3 as seed ortholog is 100%.

Group of orthologs #1155. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5K762              	100.00%		H3EGZ9              	100.00%
Bootstrap support for Q5K762 as seed ortholog is 100%.
Bootstrap support for H3EGZ9 as seed ortholog is 100%.

Group of orthologs #1156. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:15 P.pacificus:89

Q5KLM4              	100.00%		H3E5L1              	100.00%
Bootstrap support for Q5KLM4 as seed ortholog is 64%.
Alternative seed ortholog is Q5K9C2 (15 bits away from this cluster)
Bootstrap support for H3E5L1 as seed ortholog is 100%.

Group of orthologs #1157. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5KLZ3              	100.00%		H3ED07              	100.00%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for H3ED07 as seed ortholog is 100%.

Group of orthologs #1158. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5KHC7              	100.00%		H3EIH9              	100.00%
Bootstrap support for Q5KHC7 as seed ortholog is 100%.
Bootstrap support for H3EIH9 as seed ortholog is 100%.

Group of orthologs #1159. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5KIS8              	100.00%		H3F660              	100.00%
Bootstrap support for Q5KIS8 as seed ortholog is 100%.
Bootstrap support for H3F660 as seed ortholog is 100%.

Group of orthologs #1160. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

P0CR88              	100.00%		H3FKC6              	100.00%
Bootstrap support for P0CR88 as seed ortholog is 100%.
Bootstrap support for H3FKC6 as seed ortholog is 100%.

Group of orthologs #1161. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:15 P.pacificus:89

Q5KPQ5              	100.00%		H3FHR1              	100.00%
Bootstrap support for Q5KPQ5 as seed ortholog is 62%.
Alternative seed ortholog is Q5KAA8 (15 bits away from this cluster)
Bootstrap support for H3FHR1 as seed ortholog is 100%.

Group of orthologs #1162. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5KNL8              	100.00%		H3FNK9              	100.00%
Bootstrap support for Q5KNL8 as seed ortholog is 100%.
Bootstrap support for H3FNK9 as seed ortholog is 100%.

Group of orthologs #1163. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5KLV4              	100.00%		H3FSC1              	100.00%
Bootstrap support for Q5KLV4 as seed ortholog is 100%.
Bootstrap support for H3FSC1 as seed ortholog is 100%.

Group of orthologs #1164. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.pacificus:89

Q5KP27              	100.00%		H3FSS3              	100.00%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for H3FSS3 as seed ortholog is 100%.

Group of orthologs #1165. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.pacificus:88

Q5KBW1              	100.00%		H3EDA4              	100.00%
                    	       		H3F6R5              	100.00%
                    	       		H3FLZ8              	39.27%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for H3EDA4 as seed ortholog is 100%.
Bootstrap support for H3F6R5 as seed ortholog is 100%.

Group of orthologs #1166. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.pacificus:88

Q5KCX6              	100.00%		H3G235              	100.00%
                    	       		H3DUX9              	5.18%
Bootstrap support for Q5KCX6 as seed ortholog is 98%.
Bootstrap support for H3G235 as seed ortholog is 100%.

Group of orthologs #1167. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.pacificus:88

Q5KI30              	100.00%		H3EPE7              	100.00%
Bootstrap support for Q5KI30 as seed ortholog is 100%.
Bootstrap support for H3EPE7 as seed ortholog is 100%.

Group of orthologs #1168. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.pacificus:88

Q5KL70              	100.00%		H3FMB5              	100.00%
Bootstrap support for Q5KL70 as seed ortholog is 100%.
Bootstrap support for H3FMB5 as seed ortholog is 100%.

Group of orthologs #1169. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q5K874              	100.00%		H3E8E3              	100.00%
Q5K7F4              	39.67%		H3E8E2              	63.69%
                    	       		H3FMQ6              	28.09%
                    	       		H3FMQ7              	8.65%
Bootstrap support for Q5K874 as seed ortholog is 100%.
Bootstrap support for H3E8E3 as seed ortholog is 100%.

Group of orthologs #1170. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q5KB06              	100.00%		H3EEG6              	100.00%
Bootstrap support for Q5KB06 as seed ortholog is 100%.
Bootstrap support for H3EEG6 as seed ortholog is 100%.

Group of orthologs #1171. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q5KEY6              	100.00%		H3EN04              	100.00%
Bootstrap support for Q5KEY6 as seed ortholog is 100%.
Bootstrap support for H3EN04 as seed ortholog is 100%.

Group of orthologs #1172. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q5KPA5              	100.00%		H3ESN8              	100.00%
Bootstrap support for Q5KPA5 as seed ortholog is 100%.
Bootstrap support for H3ESN8 as seed ortholog is 100%.

Group of orthologs #1173. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q5K7B2              	100.00%		H3FAB2              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for H3FAB2 as seed ortholog is 100%.

Group of orthologs #1174. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q07801              	100.00%		H3FEX9              	100.00%
Bootstrap support for Q07801 as seed ortholog is 100%.
Bootstrap support for H3FEX9 as seed ortholog is 100%.

Group of orthologs #1175. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.pacificus:87

Q5KLF3              	100.00%		H3FCF7              	100.00%
Bootstrap support for Q5KLF3 as seed ortholog is 100%.
Bootstrap support for H3FCF7 as seed ortholog is 100%.

Group of orthologs #1176. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:3 P.pacificus:87

Q5KLV2              	100.00%		H3FHG2              	100.00%
Bootstrap support for Q5KLV2 as seed ortholog is 50%.
Alternative seed ortholog is Q5KHS6 (3 bits away from this cluster)
Bootstrap support for H3FHG2 as seed ortholog is 100%.

Group of orthologs #1177. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

Q5KA03              	100.00%		H3E470              	100.00%
Q5KPE0              	20.34%		
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for H3E470 as seed ortholog is 100%.

Group of orthologs #1178. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

Q5KB73              	100.00%		H3EUZ7              	100.00%
                    	       		H3EUZ9              	8.02%
Bootstrap support for Q5KB73 as seed ortholog is 100%.
Bootstrap support for H3EUZ7 as seed ortholog is 100%.

Group of orthologs #1179. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

P0CN06              	100.00%		H3F2H7              	100.00%
                    	       		H3FNE0              	24.60%
Bootstrap support for P0CN06 as seed ortholog is 100%.
Bootstrap support for H3F2H7 as seed ortholog is 100%.

Group of orthologs #1180. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

P0CO30              	100.00%		H3EGP0              	100.00%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for H3EGP0 as seed ortholog is 100%.

Group of orthologs #1181. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:37

P0CS18              	100.00%		H3FHC3              	100.00%
Bootstrap support for P0CS18 as seed ortholog is 100%.
Bootstrap support for H3FHC3 as seed ortholog is 99%.

Group of orthologs #1182. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

Q5KCL2              	100.00%		H3FMW9              	100.00%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for H3FMW9 as seed ortholog is 100%.

Group of orthologs #1183. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

Q5KAX7              	100.00%		H3G1R9              	100.00%
Bootstrap support for Q5KAX7 as seed ortholog is 100%.
Bootstrap support for H3G1R9 as seed ortholog is 100%.

Group of orthologs #1184. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

Q5KI10              	100.00%		H3G2Z6              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for H3G2Z6 as seed ortholog is 100%.

Group of orthologs #1185. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.pacificus:86

Q5KJE8              	100.00%		H3G3K8              	100.00%
Bootstrap support for Q5KJE8 as seed ortholog is 100%.
Bootstrap support for H3G3K8 as seed ortholog is 100%.

Group of orthologs #1186. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:24

Q5KKN1              	100.00%		H3E050              	100.00%
                    	       		H3FB63              	69.16%
                    	       		H3EW16              	47.66%
                    	       		H3EW17              	7.94%
Bootstrap support for Q5KKN1 as seed ortholog is 100%.
Bootstrap support for H3E050 as seed ortholog is 75%.

Group of orthologs #1187. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:85

Q5KIV7              	100.00%		H3EBC5              	100.00%
Bootstrap support for Q5KIV7 as seed ortholog is 100%.
Bootstrap support for H3EBC5 as seed ortholog is 100%.

Group of orthologs #1188. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:85

Q5KKJ3              	100.00%		H3EWZ1              	100.00%
Bootstrap support for Q5KKJ3 as seed ortholog is 100%.
Bootstrap support for H3EWZ1 as seed ortholog is 100%.

Group of orthologs #1189. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 P.pacificus:85

Q5KID6              	100.00%		H3FYE4              	100.00%
Bootstrap support for Q5KID6 as seed ortholog is 100%.
Bootstrap support for H3FYE4 as seed ortholog is 100%.

Group of orthologs #1190. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KCH4              	100.00%		H3E5X6              	100.00%
Bootstrap support for Q5KCH4 as seed ortholog is 100%.
Bootstrap support for H3E5X6 as seed ortholog is 100%.

Group of orthologs #1191. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KPT7              	100.00%		H3E353              	100.00%
Bootstrap support for Q5KPT7 as seed ortholog is 100%.
Bootstrap support for H3E353 as seed ortholog is 100%.

Group of orthologs #1192. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KMC2              	100.00%		H3ECE7              	100.00%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for H3ECE7 as seed ortholog is 100%.

Group of orthologs #1193. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KB82              	100.00%		H3F8N8              	100.00%
Bootstrap support for Q5KB82 as seed ortholog is 100%.
Bootstrap support for H3F8N8 as seed ortholog is 100%.

Group of orthologs #1194. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KI55              	100.00%		H3FCA5              	100.00%
Bootstrap support for Q5KI55 as seed ortholog is 100%.
Bootstrap support for H3FCA5 as seed ortholog is 100%.

Group of orthologs #1195. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KM03              	100.00%		H3FKC9              	100.00%
Bootstrap support for Q5KM03 as seed ortholog is 100%.
Bootstrap support for H3FKC9 as seed ortholog is 100%.

Group of orthologs #1196. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KH20              	100.00%		H3FT96              	100.00%
Bootstrap support for Q5KH20 as seed ortholog is 100%.
Bootstrap support for H3FT96 as seed ortholog is 100%.

Group of orthologs #1197. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.pacificus:84

Q5KGI2              	100.00%		H3FVA6              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for H3FVA6 as seed ortholog is 100%.

Group of orthologs #1198. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

Q5KJM9              	100.00%		H3FQG0              	100.00%
                    	       		H3FQF9              	21.98%
                    	       		H3E401              	15.02%
                    	       		H3E757              	6.59%
Bootstrap support for Q5KJM9 as seed ortholog is 100%.
Bootstrap support for H3FQG0 as seed ortholog is 100%.

Group of orthologs #1199. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

P0CR82              	100.00%		H3FJL9              	100.00%
                    	       		H3EU84              	6.32%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for H3FJL9 as seed ortholog is 100%.

Group of orthologs #1200. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:32

Q5KHQ2              	100.00%		H3E5B2              	100.00%
Bootstrap support for Q5KHQ2 as seed ortholog is 100%.
Bootstrap support for H3E5B2 as seed ortholog is 99%.

Group of orthologs #1201. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

Q5KC44              	100.00%		H3EQB1              	100.00%
Bootstrap support for Q5KC44 as seed ortholog is 100%.
Bootstrap support for H3EQB1 as seed ortholog is 100%.

Group of orthologs #1202. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

Q5KPG9              	100.00%		H3F459              	100.00%
Bootstrap support for Q5KPG9 as seed ortholog is 100%.
Bootstrap support for H3F459 as seed ortholog is 100%.

Group of orthologs #1203. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

Q5KMD8              	100.00%		H3F6L8              	100.00%
Bootstrap support for Q5KMD8 as seed ortholog is 100%.
Bootstrap support for H3F6L8 as seed ortholog is 100%.

Group of orthologs #1204. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

Q5KDF1              	100.00%		H3FKD1              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for H3FKD1 as seed ortholog is 100%.

Group of orthologs #1205. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:7

Q5K9G6              	100.00%		H3FPY0              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for H3FPY0 as seed ortholog is 50%.
Alternative seed ortholog is H3FMR9 (7 bits away from this cluster)

Group of orthologs #1206. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.pacificus:83

Q5KLA0              	100.00%		H3FZA9              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for H3FZA9 as seed ortholog is 100%.

Group of orthologs #1207. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.pacificus:82

Q5KJF8              	100.00%		H3FVJ9              	100.00%
                    	       		H3FIU1              	14.80%
                    	       		H3F0J4              	14.14%
                    	       		H3E3R7              	13.49%
                    	       		H3FVB3              	12.66%
                    	       		H3EPG7              	12.50%
                    	       		H3G1R2              	12.50%
                    	       		H3FIG0              	12.50%
                    	       		H3G1Q9              	11.84%
                    	       		H3E8D7              	10.69%
                    	       		H3FG47              	8.88%
                    	       		H3E7S7              	8.22%
                    	       		H3DU19              	7.40%
                    	       		H3EPT4              	6.91%
                    	       		H3FTP8              	6.09%
Bootstrap support for Q5KJF8 as seed ortholog is 100%.
Bootstrap support for H3FVJ9 as seed ortholog is 100%.

Group of orthologs #1208. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:10 P.pacificus:82

Q5KFN1              	100.00%		H3F4X4              	100.00%
                    	       		H3ERT5              	14.71%
Bootstrap support for Q5KFN1 as seed ortholog is 71%.
Alternative seed ortholog is Q5KFD1 (10 bits away from this cluster)
Bootstrap support for H3F4X4 as seed ortholog is 100%.

Group of orthologs #1209. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.pacificus:82

P0CM82              	100.00%		H3DRI1              	100.00%
Bootstrap support for P0CM82 as seed ortholog is 100%.
Bootstrap support for H3DRI1 as seed ortholog is 100%.

Group of orthologs #1210. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.pacificus:82

Q5KE85              	100.00%		H3EYN1              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for H3EYN1 as seed ortholog is 100%.

Group of orthologs #1211. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.pacificus:21

Q5K8L7              	100.00%		H3F8Z1              	100.00%
Bootstrap support for Q5K8L7 as seed ortholog is 100%.
Bootstrap support for H3F8Z1 as seed ortholog is 48%.
Alternative seed ortholog is H3ECS1 (21 bits away from this cluster)

Group of orthologs #1212. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.pacificus:82

Q5K8K6              	100.00%		H3FNE2              	100.00%
Bootstrap support for Q5K8K6 as seed ortholog is 100%.
Bootstrap support for H3FNE2 as seed ortholog is 100%.

Group of orthologs #1213. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.pacificus:82

P0CM12              	100.00%		H3FRZ1              	100.00%
Bootstrap support for P0CM12 as seed ortholog is 100%.
Bootstrap support for H3FRZ1 as seed ortholog is 100%.

Group of orthologs #1214. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:81

Q5KJU5              	100.00%		H3DW35              	100.00%
Q5KBC2              	25.81%		H3G4K0              	100.00%
                    	       		H3EVT8              	17.99%
Bootstrap support for Q5KJU5 as seed ortholog is 100%.
Bootstrap support for H3DW35 as seed ortholog is 100%.
Bootstrap support for H3G4K0 as seed ortholog is 100%.

Group of orthologs #1215. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:81

P0CS68              	100.00%		H3FW27              	100.00%
                    	       		H3F7N1              	37.13%
Bootstrap support for P0CS68 as seed ortholog is 100%.
Bootstrap support for H3FW27 as seed ortholog is 100%.

Group of orthologs #1216. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.pacificus:81

Q5K8A9              	100.00%		H3EHB7              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 98%.
Bootstrap support for H3EHB7 as seed ortholog is 100%.

Group of orthologs #1217. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:81

Q5KLZ1              	100.00%		H3EV79              	100.00%
Bootstrap support for Q5KLZ1 as seed ortholog is 100%.
Bootstrap support for H3EV79 as seed ortholog is 100%.

Group of orthologs #1218. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:81

Q5KL77              	100.00%		H3F460              	100.00%
Bootstrap support for Q5KL77 as seed ortholog is 100%.
Bootstrap support for H3F460 as seed ortholog is 100%.

Group of orthologs #1219. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.pacificus:81

P0CP98              	100.00%		H3FHU4              	100.00%
Bootstrap support for P0CP98 as seed ortholog is 78%.
Bootstrap support for H3FHU4 as seed ortholog is 100%.

Group of orthologs #1220. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:4 P.pacificus:81

Q5KDX1              	100.00%		H3FK31              	100.00%
Bootstrap support for Q5KDX1 as seed ortholog is 61%.
Alternative seed ortholog is Q5KI50 (4 bits away from this cluster)
Bootstrap support for H3FK31 as seed ortholog is 100%.

Group of orthologs #1221. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.pacificus:23

Q5KJT6              	100.00%		H3FL94              	100.00%
Bootstrap support for Q5KJT6 as seed ortholog is 100%.
Bootstrap support for H3FL94 as seed ortholog is 70%.
Alternative seed ortholog is H3EER1 (23 bits away from this cluster)

Group of orthologs #1222. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KL85              	100.00%		H3DZJ7              	100.00%
                    	       		H3DZJ6              	75.47%
                    	       		H3EIN8              	60.38%
                    	       		H3ENS2              	49.06%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for H3DZJ7 as seed ortholog is 100%.

Group of orthologs #1223. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KP67              	100.00%		H3FWS5              	100.00%
Q5KAN8              	9.87%		
Bootstrap support for Q5KP67 as seed ortholog is 100%.
Bootstrap support for H3FWS5 as seed ortholog is 100%.

Group of orthologs #1224. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5K9E5              	100.00%		H3DU86              	100.00%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for H3DU86 as seed ortholog is 100%.

Group of orthologs #1225. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KHJ3              	100.00%		A6YNJ5              	100.00%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for A6YNJ5 as seed ortholog is 100%.

Group of orthologs #1226. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KK46              	100.00%		H3E5C0              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for H3E5C0 as seed ortholog is 100%.

Group of orthologs #1227. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KDD0              	100.00%		H3EI85              	100.00%
Bootstrap support for Q5KDD0 as seed ortholog is 100%.
Bootstrap support for H3EI85 as seed ortholog is 100%.

Group of orthologs #1228. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KEW4              	100.00%		H3F8X1              	100.00%
Bootstrap support for Q5KEW4 as seed ortholog is 100%.
Bootstrap support for H3F8X1 as seed ortholog is 100%.

Group of orthologs #1229. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:80

Q5KMC3              	100.00%		H3FJF1              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for H3FJF1 as seed ortholog is 100%.

Group of orthologs #1230. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.pacificus:38

Q5KIY1              	100.00%		H3FZU7              	100.00%
Bootstrap support for Q5KIY1 as seed ortholog is 100%.
Bootstrap support for H3FZU7 as seed ortholog is 98%.

Group of orthologs #1231. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5K9Z3              	100.00%		H3EDI6              	100.00%
Q5KGT7              	40.94%		H3ES05              	56.50%
Bootstrap support for Q5K9Z3 as seed ortholog is 100%.
Bootstrap support for H3EDI6 as seed ortholog is 100%.

Group of orthologs #1232. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5KN44              	100.00%		H3FE44              	100.00%
                    	       		H3DT72              	60.23%
Bootstrap support for Q5KN44 as seed ortholog is 100%.
Bootstrap support for H3FE44 as seed ortholog is 100%.

Group of orthologs #1233. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:18

P0CO24              	100.00%		H3DY63              	100.00%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for H3DY63 as seed ortholog is 80%.

Group of orthologs #1234. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5KL10              	100.00%		H3DRI8              	100.00%
Bootstrap support for Q5KL10 as seed ortholog is 100%.
Bootstrap support for H3DRI8 as seed ortholog is 100%.

Group of orthologs #1235. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5KMD5              	100.00%		H3DV55              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for H3DV55 as seed ortholog is 100%.

Group of orthologs #1236. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

P0CN70              	100.00%		H3EFB3              	100.00%
Bootstrap support for P0CN70 as seed ortholog is 100%.
Bootstrap support for H3EFB3 as seed ortholog is 100%.

Group of orthologs #1237. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5KGT2              	100.00%		H3EAG9              	100.00%
Bootstrap support for Q5KGT2 as seed ortholog is 100%.
Bootstrap support for H3EAG9 as seed ortholog is 100%.

Group of orthologs #1238. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5KPD3              	100.00%		H3EAY8              	100.00%
Bootstrap support for Q5KPD3 as seed ortholog is 100%.
Bootstrap support for H3EAY8 as seed ortholog is 100%.

Group of orthologs #1239. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:32

Q5K7S6              	100.00%		H3F5Q2              	100.00%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for H3F5Q2 as seed ortholog is 90%.

Group of orthologs #1240. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5KMZ9              	100.00%		H3EW08              	100.00%
Bootstrap support for Q5KMZ9 as seed ortholog is 100%.
Bootstrap support for H3EW08 as seed ortholog is 100%.

Group of orthologs #1241. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.pacificus:79

Q5K8K4              	100.00%		H3FK64              	100.00%
Bootstrap support for Q5K8K4 as seed ortholog is 100%.
Bootstrap support for H3FK64 as seed ortholog is 100%.

Group of orthologs #1242. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.pacificus:78

Q5KLS9              	100.00%		H3FSB4              	100.00%
                    	       		H3F904              	36.89%
Bootstrap support for Q5KLS9 as seed ortholog is 100%.
Bootstrap support for H3FSB4 as seed ortholog is 100%.

Group of orthologs #1243. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.pacificus:78

Q5K6U6              	100.00%		H3EEY8              	100.00%
Bootstrap support for Q5K6U6 as seed ortholog is 72%.
Alternative seed ortholog is Q5K8W4 (25 bits away from this cluster)
Bootstrap support for H3EEY8 as seed ortholog is 100%.

Group of orthologs #1244. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.pacificus:13

Q5K9Q9              	100.00%		H3E3T1              	100.00%
                    	       		H3FY44              	90.70%
                    	       		H3DUQ9              	40.00%
                    	       		H3FUB9              	32.56%
                    	       		H3E9J0              	29.30%
                    	       		H3F710              	27.91%
                    	       		H3FGZ5              	26.28%
                    	       		H3FNW8              	25.81%
                    	       		H3FIM9              	22.33%
                    	       		H3FY45              	16.51%
                    	       		H3EPW6              	12.79%
                    	       		H3EB34              	7.44%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for H3E3T1 as seed ortholog is 66%.
Alternative seed ortholog is H3E2T9 (13 bits away from this cluster)

Group of orthologs #1245. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.pacificus:77

P0CO86              	100.00%		H3EZI7              	100.00%
                    	       		H3FRG3              	18.28%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for H3EZI7 as seed ortholog is 100%.

Group of orthologs #1246. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.pacificus:77

Q5KEW7              	100.00%		H3FRD9              	100.00%
Q5KDM5              	6.30%		
Bootstrap support for Q5KEW7 as seed ortholog is 100%.
Bootstrap support for H3FRD9 as seed ortholog is 100%.

Group of orthologs #1247. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.pacificus:77

Q5KN63              	100.00%		H3EX31              	100.00%
Bootstrap support for Q5KN63 as seed ortholog is 100%.
Bootstrap support for H3EX31 as seed ortholog is 100%.

Group of orthologs #1248. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 P.pacificus:77

Q5K9R0              	100.00%		H3FC29              	100.00%
Bootstrap support for Q5K9R0 as seed ortholog is 100%.
Bootstrap support for H3FC29 as seed ortholog is 100%.

Group of orthologs #1249. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.pacificus:77

Q5KBA9              	100.00%		H3FJB9              	100.00%
Bootstrap support for Q5KBA9 as seed ortholog is 50%.
Alternative seed ortholog is Q5KDS6 (20 bits away from this cluster)
Bootstrap support for H3FJB9 as seed ortholog is 100%.

Group of orthologs #1250. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5K8B7              	100.00%		H3F546              	100.00%
Q5KE59              	37.34%		
Q5KLQ1              	21.82%		
Q5KPG2              	20.77%		
Q5KBE8              	18.84%		
Bootstrap support for Q5K8B7 as seed ortholog is 100%.
Bootstrap support for H3F546 as seed ortholog is 100%.

Group of orthologs #1251. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:3 P.pacificus:14

Q5KK79              	100.00%		H3DXY4              	100.00%
Q5KCJ2              	7.94%		H3FMU4              	27.14%
Q5KEM0              	5.52%		
Bootstrap support for Q5KK79 as seed ortholog is 48%.
Alternative seed ortholog is Q5KAK7 (3 bits away from this cluster)
Bootstrap support for H3DXY4 as seed ortholog is 56%.
Alternative seed ortholog is H3FFI0 (14 bits away from this cluster)

Group of orthologs #1252. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.pacificus:76

Q5KHN2              	100.00%		H3F0H9              	66.72%
Q5KM91              	100.00%		H3FJ47              	100.00%
                    	       		H3ECQ9              	51.86%
Bootstrap support for Q5KHN2 as seed ortholog is 74%.
Alternative seed ortholog is Q5K7K2 (25 bits away from this cluster)
Bootstrap support for Q5KM91 as seed ortholog is 74%.
Alternative seed ortholog is Q5K7K2 (25 bits away from this cluster)
Bootstrap support for H3FJ47 as seed ortholog is 100%.

Group of orthologs #1253. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KMJ0              	100.00%		H3DSM7              	100.00%
Bootstrap support for Q5KMJ0 as seed ortholog is 100%.
Bootstrap support for H3DSM7 as seed ortholog is 100%.

Group of orthologs #1254. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KBU2              	100.00%		H3EHL7              	100.00%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for H3EHL7 as seed ortholog is 100%.

Group of orthologs #1255. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:4 P.pacificus:76

Q5KDJ3              	100.00%		H3EHX7              	100.00%
Bootstrap support for Q5KDJ3 as seed ortholog is 48%.
Alternative seed ortholog is Q5KHL4 (4 bits away from this cluster)
Bootstrap support for H3EHX7 as seed ortholog is 100%.

Group of orthologs #1256. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KCV8              	100.00%		H3EIW1              	100.00%
Bootstrap support for Q5KCV8 as seed ortholog is 100%.
Bootstrap support for H3EIW1 as seed ortholog is 100%.

Group of orthologs #1257. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KG76              	100.00%		H3EJM9              	100.00%
Bootstrap support for Q5KG76 as seed ortholog is 100%.
Bootstrap support for H3EJM9 as seed ortholog is 100%.

Group of orthologs #1258. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KE84              	100.00%		H3ERW7              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for H3ERW7 as seed ortholog is 100%.

Group of orthologs #1259. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KK55              	100.00%		H3EYN0              	100.00%
Bootstrap support for Q5KK55 as seed ortholog is 100%.
Bootstrap support for H3EYN0 as seed ortholog is 100%.

Group of orthologs #1260. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.pacificus:76

Q5KGP1              	100.00%		H3F7D0              	100.00%
Bootstrap support for Q5KGP1 as seed ortholog is 100%.
Bootstrap support for H3F7D0 as seed ortholog is 100%.

Group of orthologs #1261. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.pacificus:75

Q5KHF1              	100.00%		H3E488              	100.00%
                    	       		H3EHI9              	7.76%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for H3E488 as seed ortholog is 100%.

Group of orthologs #1262. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.pacificus:75

Q5K8L0              	100.00%		H3E8J1              	100.00%
Bootstrap support for Q5K8L0 as seed ortholog is 78%.
Bootstrap support for H3E8J1 as seed ortholog is 100%.

Group of orthologs #1263. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.pacificus:75

Q5KKF2              	100.00%		H3EZU3              	100.00%
Bootstrap support for Q5KKF2 as seed ortholog is 100%.
Bootstrap support for H3EZU3 as seed ortholog is 100%.

Group of orthologs #1264. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.pacificus:75

Q5KE42              	100.00%		H3FC53              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for H3FC53 as seed ortholog is 100%.

Group of orthologs #1265. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:0 P.pacificus:29

Q5K7Y7              	100.00%		H3EM09              	100.00%
                    	       		H3FBR8              	72.66%
                    	       		H3FBR7              	72.40%
                    	       		H3EAD0              	52.08%
                    	       		H3FBR5              	49.48%
                    	       		H3F958              	33.33%
                    	       		H3FBS0              	30.73%
                    	       		H3FBS1              	30.47%
                    	       		H3FBR9              	30.21%
                    	       		H3F053              	27.86%
                    	       		H3FXM9              	24.48%
                    	       		H3FBS5              	24.48%
                    	       		H3F1T1              	11.46%
                    	       		H3FBS4              	5.47%
Bootstrap support for Q5K7Y7 as seed ortholog is 51%.
Alternative seed ortholog is Q5K983 (0 bits away from this cluster)
Bootstrap support for H3EM09 as seed ortholog is 79%.

Group of orthologs #1266. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:74

Q5KL07              	100.00%		H3EWF4              	100.00%
                    	       		H3EWF5              	7.20%
Bootstrap support for Q5KL07 as seed ortholog is 100%.
Bootstrap support for H3EWF4 as seed ortholog is 100%.

Group of orthologs #1267. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:74

Q5KIH9              	100.00%		H3G0C4              	100.00%
                    	       		H3EWA7              	6.80%
Bootstrap support for Q5KIH9 as seed ortholog is 100%.
Bootstrap support for H3G0C4 as seed ortholog is 100%.

Group of orthologs #1268. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.pacificus:74

Q5K911              	100.00%		H3EAQ8              	100.00%
Bootstrap support for Q5K911 as seed ortholog is 50%.
Alternative seed ortholog is Q5KLI8 (23 bits away from this cluster)
Bootstrap support for H3EAQ8 as seed ortholog is 100%.

Group of orthologs #1269. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:74

Q5KBQ4              	100.00%		H3EEE3              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for H3EEE3 as seed ortholog is 100%.

Group of orthologs #1270. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:74

Q5K958              	100.00%		H3F840              	100.00%
Bootstrap support for Q5K958 as seed ortholog is 100%.
Bootstrap support for H3F840 as seed ortholog is 100%.

Group of orthologs #1271. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:13

Q5KIC6              	100.00%		H3F2P5              	100.00%
Bootstrap support for Q5KIC6 as seed ortholog is 100%.
Bootstrap support for H3F2P5 as seed ortholog is 71%.
Alternative seed ortholog is H3EKB4 (13 bits away from this cluster)

Group of orthologs #1272. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.pacificus:74

Q5KGF8              	100.00%		H3FL15              	100.00%
Bootstrap support for Q5KGF8 as seed ortholog is 100%.
Bootstrap support for H3FL15 as seed ortholog is 100%.

Group of orthologs #1273. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:22

Q5KFZ6              	100.00%		H3F019              	100.00%
                    	       		H3EAX9              	36.77%
                    	       		H3FU70              	36.77%
Bootstrap support for Q5KFZ6 as seed ortholog is 100%.
Bootstrap support for H3F019 as seed ortholog is 91%.

Group of orthologs #1274. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:73

Q5K965              	100.00%		H3FND0              	100.00%
Q5KC43              	56.56%		
Bootstrap support for Q5K965 as seed ortholog is 100%.
Bootstrap support for H3FND0 as seed ortholog is 100%.

Group of orthologs #1275. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:73

Q5K6X6              	100.00%		H3DSF6              	100.00%
Bootstrap support for Q5K6X6 as seed ortholog is 100%.
Bootstrap support for H3DSF6 as seed ortholog is 100%.

Group of orthologs #1276. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:14

P0CP32              	100.00%		H3EWJ3              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for H3EWJ3 as seed ortholog is 74%.
Alternative seed ortholog is H3DWF2 (14 bits away from this cluster)

Group of orthologs #1277. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:73

Q5K8V5              	100.00%		H3F5P2              	100.00%
Bootstrap support for Q5K8V5 as seed ortholog is 100%.
Bootstrap support for H3F5P2 as seed ortholog is 100%.

Group of orthologs #1278. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.pacificus:73

Q5KAL4              	100.00%		H3FWS4              	100.00%
Bootstrap support for Q5KAL4 as seed ortholog is 100%.
Bootstrap support for H3FWS4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:72

Q5KEY9              	100.00%		H3E3F5              	100.00%
                    	       		H3EUW4              	72.25%
                    	       		H3EU08              	59.07%
                    	       		H3EP09              	57.78%
                    	       		H3FYL3              	49.68%
                    	       		H3FH36              	41.47%
                    	       		H3E566              	38.77%
                    	       		H3F1V0              	33.59%
                    	       		H3E284              	33.15%
                    	       		H3FXN4              	32.61%
                    	       		H3DXS5              	30.45%
                    	       		H3EVC9              	29.48%
                    	       		H3FIS7              	29.48%
                    	       		H3G4K7              	28.83%
                    	       		H3G4M4              	28.83%
                    	       		H3FIV0              	28.73%
                    	       		H3EMG1              	28.51%
                    	       		H3F055              	28.29%
                    	       		H3G4L4              	27.43%
                    	       		H3DU04              	27.00%
                    	       		H3FGV7              	26.89%
                    	       		H3DXS6              	26.03%
                    	       		H3DUH8              	25.70%
                    	       		H3FF38              	25.05%
                    	       		H3FSF3              	24.95%
                    	       		H3FIU6              	24.73%
                    	       		H3DXS7              	24.30%
                    	       		H3E9W5              	23.43%
                    	       		H3ENP3              	23.22%
                    	       		H3E787              	23.22%
                    	       		H3EVP1              	23.00%
                    	       		H3FGR4              	23.00%
                    	       		H3EMF3              	22.46%
                    	       		H3FGR8              	22.35%
                    	       		H3E3F4              	22.25%
                    	       		H3FEP7              	19.98%
                    	       		H3FIU7              	19.22%
                    	       		H3ENP2              	18.57%
                    	       		H3ENN9              	18.36%
                    	       		H3FGN9              	17.93%
                    	       		H3EPD7              	17.93%
                    	       		H3FTX7              	17.06%
                    	       		H3FTX6              	16.74%
                    	       		H3F056              	16.20%
                    	       		H3EMF4              	15.33%
                    	       		H3ERR2              	15.23%
                    	       		H3F5Q6              	14.90%
                    	       		H3E822              	14.69%
                    	       		H3DW47              	14.58%
                    	       		H3E895              	14.58%
                    	       		H3EVE6              	14.36%
                    	       		H3FPR8              	14.36%
                    	       		H3EMY5              	13.93%
                    	       		H3E859              	13.71%
                    	       		H3FUW1              	13.71%
                    	       		H3EA95              	13.39%
                    	       		H3EFR0              	13.28%
                    	       		H3EMY2              	12.53%
                    	       		H3G4M1              	12.53%
                    	       		H3EMY1              	12.31%
                    	       		H3E7T9              	11.77%
                    	       		H3G4S1              	11.23%
                    	       		H3FU28              	11.23%
                    	       		H3E8H1              	11.12%
                    	       		H3F8S9              	11.02%
                    	       		H3EJU5              	10.58%
                    	       		H3E5H1              	10.58%
                    	       		H3G4D0              	10.15%
                    	       		H3FTF8              	10.04%
                    	       		H3F454              	8.42%
                    	       		H3ERU5              	8.32%
                    	       		H3EZK8              	7.13%
                    	       		H3F3I5              	7.02%
                    	       		H3EYH5              	6.59%
                    	       		H3EFQ9              	6.26%
Bootstrap support for Q5KEY9 as seed ortholog is 100%.
Bootstrap support for H3E3F5 as seed ortholog is 100%.

Group of orthologs #1280. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:5

Q5KM51              	100.00%		H3G2H0              	100.00%
                    	       		H3EKT4              	19.80%
                    	       		H3EKT5              	12.28%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for H3G2H0 as seed ortholog is 56%.
Alternative seed ortholog is H3FUP2 (5 bits away from this cluster)

Group of orthologs #1281. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:72

Q5KK86              	100.00%		H3EH24              	100.00%
Bootstrap support for Q5KK86 as seed ortholog is 100%.
Bootstrap support for H3EH24 as seed ortholog is 100%.

Group of orthologs #1282. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:72

Q5KPI9              	100.00%		H3EVT9              	100.00%
Bootstrap support for Q5KPI9 as seed ortholog is 100%.
Bootstrap support for H3EVT9 as seed ortholog is 100%.

Group of orthologs #1283. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.pacificus:72

Q5KP45              	100.00%		H3FVF7              	100.00%
Bootstrap support for Q5KP45 as seed ortholog is 100%.
Bootstrap support for H3FVF7 as seed ortholog is 100%.

Group of orthologs #1284. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.pacificus:71

Q5K9X5              	100.00%		H3EP83              	100.00%
Bootstrap support for Q5K9X5 as seed ortholog is 100%.
Bootstrap support for H3EP83 as seed ortholog is 100%.

Group of orthologs #1285. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.pacificus:71

Q5KC20              	100.00%		H3F9X6              	100.00%
Bootstrap support for Q5KC20 as seed ortholog is 100%.
Bootstrap support for H3F9X6 as seed ortholog is 100%.

Group of orthologs #1286. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.pacificus:71

Q5KP66              	100.00%		H3FHV1              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for H3FHV1 as seed ortholog is 100%.

Group of orthologs #1287. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.pacificus:70

Q5KL26              	100.00%		H3DS08              	100.00%
Bootstrap support for Q5KL26 as seed ortholog is 100%.
Bootstrap support for H3DS08 as seed ortholog is 100%.

Group of orthologs #1288. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:19 P.pacificus:70

Q5KP76              	100.00%		H3EN76              	100.00%
Bootstrap support for Q5KP76 as seed ortholog is 59%.
Alternative seed ortholog is Q5KE16 (19 bits away from this cluster)
Bootstrap support for H3EN76 as seed ortholog is 100%.

Group of orthologs #1289. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.pacificus:70

Q5KE79              	100.00%		H3FC59              	100.00%
Bootstrap support for Q5KE79 as seed ortholog is 100%.
Bootstrap support for H3FC59 as seed ortholog is 100%.

Group of orthologs #1290. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.pacificus:70

Q5KDI4              	100.00%		H3FKS0              	100.00%
Bootstrap support for Q5KDI4 as seed ortholog is 100%.
Bootstrap support for H3FKS0 as seed ortholog is 100%.

Group of orthologs #1291. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:17 P.pacificus:70

Q5KL63              	100.00%		H3FRP7              	100.00%
Bootstrap support for Q5KL63 as seed ortholog is 76%.
Bootstrap support for H3FRP7 as seed ortholog is 100%.

Group of orthologs #1292. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:69

Q5K973              	100.00%		H3EIE5              	100.00%
                    	       		H3EWX0              	47.26%
                    	       		H3ER96              	46.06%
                    	       		H3EVE1              	7.64%
Bootstrap support for Q5K973 as seed ortholog is 100%.
Bootstrap support for H3EIE5 as seed ortholog is 100%.

Group of orthologs #1293. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:69

Q5KN56              	100.00%		H3G4B2              	100.00%
Q5K6U5              	26.07%		H3FU47              	95.78%
                    	       		H3FSN4              	11.01%
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for H3G4B2 as seed ortholog is 100%.

Group of orthologs #1294. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:69

Q5KBN1              	100.00%		H3F179              	100.00%
Q5KEW1              	100.00%		H3ESS9              	15.01%
Bootstrap support for Q5KBN1 as seed ortholog is 100%.
Bootstrap support for Q5KEW1 as seed ortholog is 100%.
Bootstrap support for H3F179 as seed ortholog is 100%.

Group of orthologs #1295. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:69

Q5KDG7              	100.00%		H3EEB9              	100.00%
                    	       		H3EII2              	15.89%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for H3EEB9 as seed ortholog is 100%.

Group of orthologs #1296. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.pacificus:69

Q5KM48              	100.00%		H3FZQ1              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 100%.
Bootstrap support for H3FZQ1 as seed ortholog is 100%.

Group of orthologs #1297. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:68

Q5K7Z6              	100.00%		H3F1Y3              	100.00%
                    	       		H3FC56              	33.23%
                    	       		H3DU60              	20.68%
                    	       		H3EXD0              	18.17%
                    	       		H3DY54              	15.51%
                    	       		H3EZP4              	14.77%
                    	       		H3EED5              	12.56%
                    	       		H3EZQ4              	12.26%
                    	       		H3EZM9              	11.52%
                    	       		H3EIW6              	11.52%
                    	       		H3EIV3              	10.49%
                    	       		H3E0X2              	10.34%
                    	       		H3EJ22              	10.04%
                    	       		H3DYH6              	8.42%
                    	       		H3DXN4              	8.27%
                    	       		H3EKI8              	8.12%
                    	       		H3EDN0              	7.24%
                    	       		H3E9Z9              	6.50%
                    	       		H3ELL9              	5.61%
                    	       		H3FRX6              	5.02%
Bootstrap support for Q5K7Z6 as seed ortholog is 100%.
Bootstrap support for H3F1Y3 as seed ortholog is 100%.

Group of orthologs #1298. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:68

Q5KIA1              	100.00%		H3DWF8              	100.00%
                    	       		H3F292              	36.40%
                    	       		H3EWB1              	20.18%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for H3DWF8 as seed ortholog is 100%.

Group of orthologs #1299. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:68

P0CM06              	100.00%		H3F461              	100.00%
                    	       		H3F462              	100.00%
                    	       		H3E087              	24.34%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for H3F461 as seed ortholog is 100%.
Bootstrap support for H3F462 as seed ortholog is 100%.

Group of orthologs #1300. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:68

P0CR84              	100.00%		H3DTH0              	100.00%
                    	       		H3DTH1              	20.00%
Bootstrap support for P0CR84 as seed ortholog is 100%.
Bootstrap support for H3DTH0 as seed ortholog is 100%.

Group of orthologs #1301. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:68

Q5KN14              	100.00%		H3DYZ7              	100.00%
Q5KQ12              	21.74%		
Bootstrap support for Q5KN14 as seed ortholog is 100%.
Bootstrap support for H3DYZ7 as seed ortholog is 100%.

Group of orthologs #1302. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:68

Q5KHT0              	100.00%		H3EWR0              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for H3EWR0 as seed ortholog is 100%.

Group of orthologs #1303. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 P.pacificus:14

Q5KNQ6              	100.00%		H3FRP2              	100.00%
Bootstrap support for Q5KNQ6 as seed ortholog is 100%.
Bootstrap support for H3FRP2 as seed ortholog is 74%.
Alternative seed ortholog is H3FP51 (14 bits away from this cluster)

Group of orthologs #1304. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:67

Q5KDD8              	100.00%		H3FFV6              	100.00%
                    	       		H3EZ69              	34.42%
                    	       		H3FFV4              	28.25%
                    	       		H3EY25              	10.20%
                    	       		H3FFV3              	10.20%
                    	       		H3FFS0              	9.19%
                    	       		H3FFS4              	8.18%
                    	       		H3F0P7              	7.51%
                    	       		H3FFR9              	6.61%
                    	       		H3EC63              	6.05%
                    	       		H3FYH4              	5.72%
Bootstrap support for Q5KDD8 as seed ortholog is 100%.
Bootstrap support for H3FFV6 as seed ortholog is 100%.

Group of orthologs #1305. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:67

Q5KJZ4              	100.00%		H3ERB2              	100.00%
                    	       		H3EMW3              	19.75%
Bootstrap support for Q5KJZ4 as seed ortholog is 100%.
Bootstrap support for H3ERB2 as seed ortholog is 100%.

Group of orthologs #1306. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:67

Q5K8R9              	100.00%		H3DWF6              	100.00%
Bootstrap support for Q5K8R9 as seed ortholog is 100%.
Bootstrap support for H3DWF6 as seed ortholog is 100%.

Group of orthologs #1307. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:1

Q5KLI5              	100.00%		H3F022              	100.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for H3F022 as seed ortholog is 53%.
Alternative seed ortholog is H3EZT6 (1 bits away from this cluster)

Group of orthologs #1308. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:67

Q5KCT7              	100.00%		H3F844              	100.00%
Bootstrap support for Q5KCT7 as seed ortholog is 100%.
Bootstrap support for H3F844 as seed ortholog is 100%.

Group of orthologs #1309. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.pacificus:67

P0CR98              	100.00%		H3FQN7              	100.00%
Bootstrap support for P0CR98 as seed ortholog is 100%.
Bootstrap support for H3FQN7 as seed ortholog is 100%.

Group of orthologs #1310. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.pacificus:66

Q5KB94              	100.00%		H3DZR8              	100.00%
                    	       		H3FD73              	81.84%
                    	       		H3E8N2              	65.53%
                    	       		H3FCL9              	34.47%
                    	       		H3E8E5              	16.32%
Bootstrap support for Q5KB94 as seed ortholog is 100%.
Bootstrap support for H3DZR8 as seed ortholog is 100%.

Group of orthologs #1311. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.pacificus:66

Q5KL09              	100.00%		H3E8S4              	100.00%
                    	       		H3E0N4              	67.87%
                    	       		H3EJA4              	14.01%
Bootstrap support for Q5KL09 as seed ortholog is 64%.
Alternative seed ortholog is Q5KE49 (11 bits away from this cluster)
Bootstrap support for H3E8S4 as seed ortholog is 100%.

Group of orthologs #1312. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.pacificus:66

P0CR42              	100.00%		H3G290              	100.00%
                    	       		H3F8G8              	49.76%
                    	       		H3FTX2              	6.48%
Bootstrap support for P0CR42 as seed ortholog is 100%.
Bootstrap support for H3G290 as seed ortholog is 100%.

Group of orthologs #1313. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.pacificus:66

Q5KCF3              	100.00%		H3FRZ0              	100.00%
Bootstrap support for Q5KCF3 as seed ortholog is 100%.
Bootstrap support for H3FRZ0 as seed ortholog is 100%.

Group of orthologs #1314. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.pacificus:66

Q5KMM2              	100.00%		H3FIB7              	100.00%
Bootstrap support for Q5KMM2 as seed ortholog is 100%.
Bootstrap support for H3FIB7 as seed ortholog is 100%.

Group of orthologs #1315. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.pacificus:66

Q5KJM5              	100.00%		H3FPC6              	100.00%
Bootstrap support for Q5KJM5 as seed ortholog is 100%.
Bootstrap support for H3FPC6 as seed ortholog is 100%.

Group of orthologs #1316. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.pacificus:65

Q5K9W5              	100.00%		H3EE54              	100.00%
Bootstrap support for Q5K9W5 as seed ortholog is 100%.
Bootstrap support for H3EE54 as seed ortholog is 100%.

Group of orthologs #1317. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:21 P.pacificus:65

Q5KLT4              	100.00%		H3EGY4              	100.00%
Bootstrap support for Q5KLT4 as seed ortholog is 75%.
Bootstrap support for H3EGY4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.pacificus:65

Q5KCV9              	100.00%		H3FAP7              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for H3FAP7 as seed ortholog is 100%.

Group of orthologs #1319. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.pacificus:65

Q5KFH1              	100.00%		H3FKJ9              	100.00%
Bootstrap support for Q5KFH1 as seed ortholog is 100%.
Bootstrap support for H3FKJ9 as seed ortholog is 100%.

Group of orthologs #1320. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.pacificus:65

Q5KIX6              	100.00%		H3FY79              	100.00%
Bootstrap support for Q5KIX6 as seed ortholog is 100%.
Bootstrap support for H3FY79 as seed ortholog is 100%.

Group of orthologs #1321. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:64

Q5KCR0              	100.00%		H3DYF0              	100.00%
Bootstrap support for Q5KCR0 as seed ortholog is 100%.
Bootstrap support for H3DYF0 as seed ortholog is 100%.

Group of orthologs #1322. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:64

Q5KCS9              	100.00%		H3FQY7              	100.00%
Bootstrap support for Q5KCS9 as seed ortholog is 100%.
Bootstrap support for H3FQY7 as seed ortholog is 100%.

Group of orthologs #1323. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.pacificus:64

Q5KCJ7              	100.00%		H3FUS0              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for H3FUS0 as seed ortholog is 100%.

Group of orthologs #1324. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:63

Q5K9F5              	100.00%		H3DSK6              	100.00%
                    	       		H3EXW9              	7.37%
Bootstrap support for Q5K9F5 as seed ortholog is 100%.
Bootstrap support for H3DSK6 as seed ortholog is 100%.

Group of orthologs #1325. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:63

Q5KMP7              	100.00%		H3EDS6              	100.00%
                    	       		H3E5M2              	64.25%
Bootstrap support for Q5KMP7 as seed ortholog is 100%.
Bootstrap support for H3EDS6 as seed ortholog is 100%.

Group of orthologs #1326. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:63

Q5KI32              	100.00%		H3DV77              	100.00%
Bootstrap support for Q5KI32 as seed ortholog is 100%.
Bootstrap support for H3DV77 as seed ortholog is 100%.

Group of orthologs #1327. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 P.pacificus:63

Q5KBS6              	100.00%		H3EDJ2              	100.00%
Bootstrap support for Q5KBS6 as seed ortholog is 100%.
Bootstrap support for H3EDJ2 as seed ortholog is 100%.

Group of orthologs #1328. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

Q5K7H9              	100.00%		H3F013              	100.00%
                    	       		H3E7A3              	41.93%
                    	       		H3FRX1              	39.91%
                    	       		H3DYT3              	19.96%
Bootstrap support for Q5K7H9 as seed ortholog is 100%.
Bootstrap support for H3F013 as seed ortholog is 100%.

Group of orthologs #1329. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

Q5KB75              	100.00%		H3ET57              	100.00%
                    	       		H3ET58              	49.19%
Bootstrap support for Q5KB75 as seed ortholog is 100%.
Bootstrap support for H3ET57 as seed ortholog is 100%.

Group of orthologs #1330. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

Q5KLY6              	100.00%		H3DVT3              	100.00%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for H3DVT3 as seed ortholog is 100%.

Group of orthologs #1331. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

Q5KPH8              	100.00%		H3DYU0              	100.00%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for H3DYU0 as seed ortholog is 100%.

Group of orthologs #1332. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

P0CS00              	100.00%		H3EN72              	100.00%
Bootstrap support for P0CS00 as seed ortholog is 100%.
Bootstrap support for H3EN72 as seed ortholog is 100%.

Group of orthologs #1333. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

Q5KKY4              	100.00%		H3EGX3              	100.00%
Bootstrap support for Q5KKY4 as seed ortholog is 100%.
Bootstrap support for H3EGX3 as seed ortholog is 100%.

Group of orthologs #1334. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

P0CM00              	100.00%		H3EW26              	100.00%
Bootstrap support for P0CM00 as seed ortholog is 100%.
Bootstrap support for H3EW26 as seed ortholog is 100%.

Group of orthologs #1335. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.pacificus:62

Q5KDK2              	100.00%		H3FK02              	100.00%
Bootstrap support for Q5KDK2 as seed ortholog is 100%.
Bootstrap support for H3FK02 as seed ortholog is 100%.

Group of orthologs #1336. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.pacificus:3

Q5KQ37              	100.00%		H3E5K3              	100.00%
                    	       		H3EJC3              	100.00%
                    	       		H3EIT7              	5.18%
Bootstrap support for Q5KQ37 as seed ortholog is 100%.
Bootstrap support for H3E5K3 as seed ortholog is 56%.
Alternative seed ortholog is H3FP22 (3 bits away from this cluster)
Bootstrap support for H3EJC3 as seed ortholog is 37%.
Alternative seed ortholog is H3FP22 (3 bits away from this cluster)

Group of orthologs #1337. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:12 P.pacificus:61

Q5KAA3              	100.00%		H3DW11              	100.00%
Bootstrap support for Q5KAA3 as seed ortholog is 65%.
Alternative seed ortholog is Q5KLT2 (12 bits away from this cluster)
Bootstrap support for H3DW11 as seed ortholog is 100%.

Group of orthologs #1338. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.pacificus:61

P0CP16              	100.00%		H3G1S5              	100.00%
Bootstrap support for P0CP16 as seed ortholog is 100%.
Bootstrap support for H3G1S5 as seed ortholog is 100%.

Group of orthologs #1339. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.pacificus:60

Q5KA20              	100.00%		H3DY24              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 100%.
Bootstrap support for H3DY24 as seed ortholog is 100%.

Group of orthologs #1340. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.pacificus:60

Q5KA99              	100.00%		H3ESH6              	100.00%
Bootstrap support for Q5KA99 as seed ortholog is 100%.
Bootstrap support for H3ESH6 as seed ortholog is 100%.

Group of orthologs #1341. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.pacificus:60

Q5K8W3              	100.00%		H3EYZ6              	100.00%
Bootstrap support for Q5K8W3 as seed ortholog is 100%.
Bootstrap support for H3EYZ6 as seed ortholog is 100%.

Group of orthologs #1342. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.pacificus:60

Q5KN28              	100.00%		H3FHE2              	100.00%
Bootstrap support for Q5KN28 as seed ortholog is 100%.
Bootstrap support for H3FHE2 as seed ortholog is 100%.

Group of orthologs #1343. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:59

Q5K930              	100.00%		H3FC65              	100.00%
                    	       		H3FC66              	34.15%
                    	       		H3FP68              	17.54%
                    	       		H3EAN5              	14.77%
Bootstrap support for Q5K930 as seed ortholog is 100%.
Bootstrap support for H3FC65 as seed ortholog is 100%.

Group of orthologs #1344. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:59

Q5KLA4              	100.00%		H3DWV0              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for H3DWV0 as seed ortholog is 100%.

Group of orthologs #1345. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:19 P.pacificus:59

Q5KFY6              	100.00%		H3FHE9              	100.00%
Bootstrap support for Q5KFY6 as seed ortholog is 67%.
Alternative seed ortholog is Q5KP65 (19 bits away from this cluster)
Bootstrap support for H3FHE9 as seed ortholog is 100%.

Group of orthologs #1346. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.pacificus:59

P0CS74              	100.00%		H3FYB6              	100.00%
Bootstrap support for P0CS74 as seed ortholog is 100%.
Bootstrap support for H3FYB6 as seed ortholog is 100%.

Group of orthologs #1347. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 P.pacificus:9

Q5KH40              	100.00%		H3FHB4              	100.00%
Q5KH07              	5.09%		
Bootstrap support for Q5KH40 as seed ortholog is 100%.
Bootstrap support for H3FHB4 as seed ortholog is 64%.
Alternative seed ortholog is H3EL32 (9 bits away from this cluster)

Group of orthologs #1348. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:57

Q5KQ74              	100.00%		H3FTS1              	100.00%
Q5KHX6              	100.00%		H3EWL1              	100.00%
Q5KEM4              	100.00%		H3EJI7              	100.00%
Q5KHF5              	100.00%		H3FYG1              	100.00%
Q5K7L4              	70.42%		H3FER8              	74.60%
Q5KI02              	61.04%		H3FE21              	62.20%
Q5K9T2              	56.78%		H3DRN9              	33.73%
Q5KBM4              	35.17%		H3G4A6              	25.72%
Q5KBE7              	26.68%		H3FLM3              	23.44%
Q5KKS6              	25.78%		H3F5H2              	23.21%
Q5KNP3              	20.57%		H3FYF7              	22.97%
Q5KKU1              	19.97%		H3F990              	22.19%
Q5KA87              	19.97%		H3EYF9              	21.89%
Q5K7A1              	18.61%		H3E8A8              	21.29%
Q5KPG5              	18.02%		H3FU54              	19.62%
Q5KC55              	17.88%		H3EC57              	18.78%
Q5K875              	15.70%		H3FL24              	15.67%
Q5K886              	15.70%		H3FGX2              	15.31%
Q5K7F5              	14.66%		H3EF45              	12.08%
Q5K9X4              	12.52%		H3EYW0              	9.49%
Q5KNB7              	11.18%		H3FN34              	8.76%
Q5K9A2              	10.99%		H3EM11              	8.64%
Q5KN93              	10.90%		H3F8N5              	8.47%
Q5KFK2              	10.89%		H3G213              	7.88%
Q5KC83              	10.79%		H3FJA8              	7.63%
Q5KAT7              	10.50%		H3FUJ6              	7.59%
Q5K860              	10.41%		H3F288              	7.30%
Q5KFK1              	10.40%		H3F7V7              	6.13%
Q5KG03              	9.93%		H3FE27              	5.95%
Q5KA09              	9.84%		H3EFQ3              	5.84%
Q5KNV0              	9.84%		H3FSC9              	5.61%
Q5KEI1              	9.83%		H3F285              	5.40%
Q5K928              	9.83%		H3F6C8              	5.26%
Q5KB76              	8.87%		H3EHY5              	5.26%
Q5KFM8              	8.87%		
Q5KER3              	8.57%		
Q5K984              	8.49%		
Q5KJE6              	8.19%		
Q5KL40              	7.90%		
Q5KDY2              	6.65%		
Q5KGY8              	6.45%		
Q5KH82              	6.45%		
Bootstrap support for Q5KQ74 as seed ortholog is 100%.
Bootstrap support for Q5KHX6 as seed ortholog is 100%.
Bootstrap support for Q5KEM4 as seed ortholog is 100%.
Bootstrap support for Q5KHF5 as seed ortholog is 100%.
Bootstrap support for H3FTS1 as seed ortholog is 100%.
Bootstrap support for H3EWL1 as seed ortholog is 100%.
Bootstrap support for H3EJI7 as seed ortholog is 100%.
Bootstrap support for H3FYG1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:57

Q5KEP0              	100.00%		H3G2F8              	100.00%
Q5KEN9              	65.92%		H3EGL5              	26.38%
Q5KEN8              	63.10%		
Q5KEP1              	58.05%		
Q5KBZ7              	49.94%		
Bootstrap support for Q5KEP0 as seed ortholog is 100%.
Bootstrap support for H3G2F8 as seed ortholog is 100%.

Group of orthologs #1350. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:57

Q5KI44              	100.00%		H3FU89              	100.00%
                    	       		H3E114              	11.86%
Bootstrap support for Q5KI44 as seed ortholog is 100%.
Bootstrap support for H3FU89 as seed ortholog is 100%.

Group of orthologs #1351. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:57

Q5KEN7              	100.00%		H3F4E3              	100.00%
Bootstrap support for Q5KEN7 as seed ortholog is 100%.
Bootstrap support for H3F4E3 as seed ortholog is 100%.

Group of orthologs #1352. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.pacificus:57

Q5KKD6              	100.00%		H3F5L6              	100.00%
Bootstrap support for Q5KKD6 as seed ortholog is 100%.
Bootstrap support for H3F5L6 as seed ortholog is 100%.

Group of orthologs #1353. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.pacificus:56

Q5KP88              	100.00%		H3FD23              	100.00%
                    	       		H3EUX1              	7.41%
                    	       		H3EUX2              	5.00%
Bootstrap support for Q5KP88 as seed ortholog is 100%.
Bootstrap support for H3FD23 as seed ortholog is 100%.

Group of orthologs #1354. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.pacificus:56

Q5KE12              	100.00%		H3E5I1              	100.00%
Bootstrap support for Q5KE12 as seed ortholog is 100%.
Bootstrap support for H3E5I1 as seed ortholog is 100%.

Group of orthologs #1355. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.pacificus:56

Q5KLF0              	100.00%		H3EBE0              	100.00%
Bootstrap support for Q5KLF0 as seed ortholog is 100%.
Bootstrap support for H3EBE0 as seed ortholog is 100%.

Group of orthologs #1356. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:7 P.pacificus:56

Q5KK67              	100.00%		H3FHD8              	100.00%
Bootstrap support for Q5KK67 as seed ortholog is 55%.
Alternative seed ortholog is Q5K8V2 (7 bits away from this cluster)
Bootstrap support for H3FHD8 as seed ortholog is 100%.

Group of orthologs #1357. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.pacificus:56

Q5KMV9              	100.00%		H3FK73              	100.00%
Bootstrap support for Q5KMV9 as seed ortholog is 100%.
Bootstrap support for H3FK73 as seed ortholog is 100%.

Group of orthologs #1358. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:7 P.pacificus:55

Q5KGK8              	100.00%		H3DS07              	100.00%
Bootstrap support for Q5KGK8 as seed ortholog is 72%.
Alternative seed ortholog is Q5KIE5 (7 bits away from this cluster)
Bootstrap support for H3DS07 as seed ortholog is 100%.

Group of orthologs #1359. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.pacificus:55

Q5KDP6              	100.00%		H3EUU3              	100.00%
Bootstrap support for Q5KDP6 as seed ortholog is 100%.
Bootstrap support for H3EUU3 as seed ortholog is 100%.

Group of orthologs #1360. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.pacificus:55

Q5KJT0              	100.00%		H3EQQ7              	100.00%
Bootstrap support for Q5KJT0 as seed ortholog is 100%.
Bootstrap support for H3EQQ7 as seed ortholog is 100%.

Group of orthologs #1361. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:54

Q5KK26              	100.00%		H3EDH5              	100.00%
Bootstrap support for Q5KK26 as seed ortholog is 100%.
Bootstrap support for H3EDH5 as seed ortholog is 100%.

Group of orthologs #1362. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:54

Q5KA93              	100.00%		H3F1J3              	100.00%
Bootstrap support for Q5KA93 as seed ortholog is 100%.
Bootstrap support for H3F1J3 as seed ortholog is 100%.

Group of orthologs #1363. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:54

Q5KEV9              	100.00%		H3F4E4              	100.00%
Bootstrap support for Q5KEV9 as seed ortholog is 100%.
Bootstrap support for H3F4E4 as seed ortholog is 100%.

Group of orthologs #1364. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:54

Q5K8C9              	100.00%		H3FC50              	100.00%
Bootstrap support for Q5K8C9 as seed ortholog is 100%.
Bootstrap support for H3FC50 as seed ortholog is 100%.

Group of orthologs #1365. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:54

Q5KBR2              	100.00%		H3FF93              	100.00%
Bootstrap support for Q5KBR2 as seed ortholog is 100%.
Bootstrap support for H3FF93 as seed ortholog is 100%.

Group of orthologs #1366. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.pacificus:54

P0CN62              	100.00%		H3FKQ5              	100.00%
Bootstrap support for P0CN62 as seed ortholog is 100%.
Bootstrap support for H3FKQ5 as seed ortholog is 100%.

Group of orthologs #1367. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.pacificus:53

Q5KBY0              	100.00%		H3EV13              	100.00%
                    	       		H3EV14              	45.89%
                    	       		H3EV11              	33.43%
                    	       		H3F475              	30.32%
                    	       		H3G151              	25.65%
                    	       		H3G155              	24.76%
                    	       		H3G157              	24.39%
                    	       		H3G147              	16.31%
                    	       		H3FNP7              	10.90%
                    	       		H3EUB3              	10.75%
                    	       		H3FNP9              	8.82%
                    	       		H3F8B2              	7.78%
                    	       		H3EUC2              	5.56%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for H3EV13 as seed ortholog is 100%.

Group of orthologs #1368. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.pacificus:53

Q5KDU9              	100.00%		H3E9L0              	100.00%
Bootstrap support for Q5KDU9 as seed ortholog is 100%.
Bootstrap support for H3E9L0 as seed ortholog is 100%.

Group of orthologs #1369. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.pacificus:53

Q5KPR0              	100.00%		H3E7J4              	100.00%
Bootstrap support for Q5KPR0 as seed ortholog is 100%.
Bootstrap support for H3E7J4 as seed ortholog is 100%.

Group of orthologs #1370. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:52

Q5KIP7              	100.00%		H3F541              	100.00%
                    	       		H3FM45              	7.44%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for H3F541 as seed ortholog is 100%.

Group of orthologs #1371. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:52

P0CQ54              	100.00%		H3E6D0              	100.00%
Bootstrap support for P0CQ54 as seed ortholog is 100%.
Bootstrap support for H3E6D0 as seed ortholog is 100%.

Group of orthologs #1372. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:52

Q5KAJ0              	100.00%		H3E8J5              	100.00%
Bootstrap support for Q5KAJ0 as seed ortholog is 100%.
Bootstrap support for H3E8J5 as seed ortholog is 100%.

Group of orthologs #1373. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:52

Q5KLP1              	100.00%		H3DYU5              	100.00%
Bootstrap support for Q5KLP1 as seed ortholog is 100%.
Bootstrap support for H3DYU5 as seed ortholog is 100%.

Group of orthologs #1374. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:52

Q5KA95              	100.00%		H3FK92              	100.00%
Bootstrap support for Q5KA95 as seed ortholog is 100%.
Bootstrap support for H3FK92 as seed ortholog is 100%.

Group of orthologs #1375. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.pacificus:52

Q5KHC1              	100.00%		H3FKQ2              	100.00%
Bootstrap support for Q5KHC1 as seed ortholog is 100%.
Bootstrap support for H3FKQ2 as seed ortholog is 100%.

Group of orthologs #1376. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.pacificus:50

Q5K8P0              	100.00%		H3F0S9              	100.00%
Bootstrap support for Q5K8P0 as seed ortholog is 100%.
Bootstrap support for H3F0S9 as seed ortholog is 100%.

Group of orthologs #1377. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.pacificus:50

Q5KIV8              	100.00%		H3FN75              	100.00%
Bootstrap support for Q5KIV8 as seed ortholog is 100%.
Bootstrap support for H3FN75 as seed ortholog is 100%.

Group of orthologs #1378. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.pacificus:49

Q5K8D8              	100.00%		H3E358              	100.00%
Bootstrap support for Q5K8D8 as seed ortholog is 100%.
Bootstrap support for H3E358 as seed ortholog is 100%.

Group of orthologs #1379. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.pacificus:49

Q5KCQ9              	100.00%		H3ECV1              	100.00%
Bootstrap support for Q5KCQ9 as seed ortholog is 100%.
Bootstrap support for H3ECV1 as seed ortholog is 100%.

Group of orthologs #1380. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.pacificus:49

P0CS95              	100.00%		H3EQU6              	100.00%
Bootstrap support for P0CS95 as seed ortholog is 100%.
Bootstrap support for H3EQU6 as seed ortholog is 100%.

Group of orthologs #1381. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.pacificus:48

Q5KE91              	100.00%		H3DRR4              	100.00%
Bootstrap support for Q5KE91 as seed ortholog is 100%.
Bootstrap support for H3DRR4 as seed ortholog is 100%.

Group of orthologs #1382. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.pacificus:48

Q5K779              	100.00%		H3EA25              	100.00%
Bootstrap support for Q5K779 as seed ortholog is 100%.
Bootstrap support for H3EA25 as seed ortholog is 100%.

Group of orthologs #1383. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.pacificus:47

Q5KDP7              	100.00%		H3DTF3              	100.00%
                    	       		H3FIE6              	32.03%
                    	       		H3FWB6              	30.88%
                    	       		H3FWW2              	21.43%
                    	       		H3FSJ8              	6.91%
Bootstrap support for Q5KDP7 as seed ortholog is 100%.
Bootstrap support for H3DTF3 as seed ortholog is 100%.

Group of orthologs #1384. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 P.pacificus:46

Q5KFD8              	100.00%		H3EZR9              	100.00%
                    	       		H3FS10              	18.82%
Bootstrap support for Q5KFD8 as seed ortholog is 100%.
Bootstrap support for H3EZR9 as seed ortholog is 100%.

Group of orthologs #1385. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:45

Q5KKG2              	100.00%		H3FS80              	100.00%
Q5KDQ6              	24.38%		
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for H3FS80 as seed ortholog is 100%.

Group of orthologs #1386. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:45

Q5K823              	100.00%		H3DYJ0              	100.00%
Bootstrap support for Q5K823 as seed ortholog is 100%.
Bootstrap support for H3DYJ0 as seed ortholog is 100%.

Group of orthologs #1387. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.pacificus:45

Q5KAA9              	100.00%		H3FCG6              	100.00%
Bootstrap support for Q5KAA9 as seed ortholog is 100%.
Bootstrap support for H3FCG6 as seed ortholog is 100%.

Group of orthologs #1388. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.pacificus:44

Q5K7F8              	100.00%		H3FYD1              	100.00%
                    	       		H3F4U4              	25.00%
Bootstrap support for Q5K7F8 as seed ortholog is 100%.
Bootstrap support for H3FYD1 as seed ortholog is 100%.

Group of orthologs #1389. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.pacificus:44

P0CM36              	100.00%		H3EJG9              	100.00%
Bootstrap support for P0CM36 as seed ortholog is 100%.
Bootstrap support for H3EJG9 as seed ortholog is 100%.

Group of orthologs #1390. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.pacificus:43

Q5KL90              	100.00%		H3FCW9              	100.00%
                    	       		H3EMB9              	47.80%
Bootstrap support for Q5KL90 as seed ortholog is 100%.
Bootstrap support for H3FCW9 as seed ortholog is 100%.

Group of orthologs #1391. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.pacificus:43

Q5KCZ3              	100.00%		H3DYK3              	100.00%
Bootstrap support for Q5KCZ3 as seed ortholog is 100%.
Bootstrap support for H3DYK3 as seed ortholog is 100%.

Group of orthologs #1392. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.pacificus:42

Q5KBR3              	100.00%		H3EEN8              	100.00%
Bootstrap support for Q5KBR3 as seed ortholog is 100%.
Bootstrap support for H3EEN8 as seed ortholog is 100%.

Group of orthologs #1393. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.pacificus:42

Q5KAN1              	100.00%		H3EZM2              	100.00%
Bootstrap support for Q5KAN1 as seed ortholog is 100%.
Bootstrap support for H3EZM2 as seed ortholog is 100%.

Group of orthologs #1394. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.pacificus:41

Q5KAZ1              	100.00%		H3FYK8              	100.00%
                    	       		H3FGR6              	43.18%
                    	       		H3FGR3              	41.41%
                    	       		H3EWW3              	22.22%
Bootstrap support for Q5KAZ1 as seed ortholog is 100%.
Bootstrap support for H3FYK8 as seed ortholog is 100%.

Group of orthologs #1395. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 P.pacificus:41

Q5KBL5              	100.00%		H3DWS2              	100.00%
Bootstrap support for Q5KBL5 as seed ortholog is 100%.
Bootstrap support for H3DWS2 as seed ortholog is 100%.

Group of orthologs #1396. Best score 40 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.pacificus:40

Q5K8E5              	100.00%		H3ETE2              	100.00%
                    	       		H3E2B1              	37.81%
                    	       		H3EJS9              	37.81%
                    	       		H3FND6              	26.25%
                    	       		H3FNC0              	19.38%
                    	       		H3FC28              	15.31%
                    	       		H3G4J3              	14.69%
                    	       		H3F0W5              	14.69%
                    	       		H3FSP0              	13.75%
                    	       		H3DZ72              	13.44%
                    	       		H3FKW1              	12.50%
                    	       		H3G1R4              	7.50%
                    	       		H3FTQ2              	6.88%
                    	       		H3FG54              	5.00%
Bootstrap support for Q5K8E5 as seed ortholog is 100%.
Bootstrap support for H3ETE2 as seed ortholog is 100%.