###################################
1594 groups of orthologs
1632 in-paralogs from C.neoformans
1688 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3503 bits
Score difference with first non-orthologous sequence - C.neoformans:3503 P.jiroveci:3503

Q5KPW2              	100.00%		L0PCQ0              	100.00%
Bootstrap support for Q5KPW2 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 3331 bits
Score difference with first non-orthologous sequence - C.neoformans:3331 P.jiroveci:3331

Q5KFR9              	100.00%		L0PGR1              	100.00%
Bootstrap support for Q5KFR9 as seed ortholog is 100%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #3. Best score 2341 bits
Score difference with first non-orthologous sequence - C.neoformans:1247 P.jiroveci:2341

Q5KNM2              	100.00%		L0P7C3              	100.00%
Bootstrap support for Q5KNM2 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #4. Best score 2307 bits
Score difference with first non-orthologous sequence - C.neoformans:1512 P.jiroveci:1231

Q5KET5              	100.00%		L0PHB1              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #5. Best score 2216 bits
Score difference with first non-orthologous sequence - C.neoformans:2216 P.jiroveci:2216

Q5KFC9              	100.00%		L0PGI2              	100.00%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #6. Best score 2175 bits
Score difference with first non-orthologous sequence - C.neoformans:2175 P.jiroveci:2175

Q5KNL1              	100.00%		L0PFL5              	100.00%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #7. Best score 2171 bits
Score difference with first non-orthologous sequence - C.neoformans:2171 P.jiroveci:2171

Q5KEY7              	100.00%		L0PEQ1              	100.00%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #8. Best score 2127 bits
Score difference with first non-orthologous sequence - C.neoformans:2127 P.jiroveci:2127

Q5K6T7              	100.00%		L0PD34              	100.00%
Bootstrap support for Q5K6T7 as seed ortholog is 100%.
Bootstrap support for L0PD34 as seed ortholog is 100%.

Group of orthologs #9. Best score 2052 bits
Score difference with first non-orthologous sequence - C.neoformans:2052 P.jiroveci:2052

Q5KGG3              	100.00%		L0PB90              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #10. Best score 1961 bits
Score difference with first non-orthologous sequence - C.neoformans:1961 P.jiroveci:1961

Q5KAK5              	100.00%		L0PEL4              	100.00%
Bootstrap support for Q5KAK5 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1868 bits
Score difference with first non-orthologous sequence - C.neoformans:1868 P.jiroveci:1868

Q5KA29              	100.00%		L0PBF5              	100.00%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #12. Best score 1812 bits
Score difference with first non-orthologous sequence - C.neoformans:1812 P.jiroveci:1812

P0CN26              	100.00%		L0PGJ4              	100.00%
Bootstrap support for P0CN26 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #13. Best score 1491 bits
Score difference with first non-orthologous sequence - C.neoformans:835 P.jiroveci:1491

Q5KC33              	100.00%		L0PG77              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #14. Best score 1486 bits
Score difference with first non-orthologous sequence - C.neoformans:1486 P.jiroveci:1486

Q5KP97              	100.00%		L0P818              	100.00%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #15. Best score 1460 bits
Score difference with first non-orthologous sequence - C.neoformans:1460 P.jiroveci:1460

Q5KFV9              	100.00%		L0PB43              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #16. Best score 1432 bits
Score difference with first non-orthologous sequence - C.neoformans:1432 P.jiroveci:1432

Q5KE57              	100.00%		L0PFU4              	100.00%
Bootstrap support for Q5KE57 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #17. Best score 1427 bits
Score difference with first non-orthologous sequence - C.neoformans:1427 P.jiroveci:1427

Q5KKP9              	100.00%		L0PFR4              	100.00%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for L0PFR4 as seed ortholog is 100%.

Group of orthologs #18. Best score 1322 bits
Score difference with first non-orthologous sequence - C.neoformans:1001 P.jiroveci:1322

Q5K9W1              	100.00%		L0PDK3              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #19. Best score 1307 bits
Score difference with first non-orthologous sequence - C.neoformans:1307 P.jiroveci:1307

Q5KBV2              	100.00%		L0PAK7              	100.00%
                    	       		L0P8F2              	64.41%
Bootstrap support for Q5KBV2 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.

Group of orthologs #20. Best score 1304 bits
Score difference with first non-orthologous sequence - C.neoformans:1304 P.jiroveci:1304

P0CR22              	100.00%		L0PCG8              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #21. Best score 1294 bits
Score difference with first non-orthologous sequence - C.neoformans:1294 P.jiroveci:1294

Q5KEH7              	100.00%		L0PCR2              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #22. Best score 1289 bits
Score difference with first non-orthologous sequence - C.neoformans:923 P.jiroveci:1289

Q5KEV8              	100.00%		L0P9P7              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #23. Best score 1243 bits
Score difference with first non-orthologous sequence - C.neoformans:1243 P.jiroveci:1243

P0CM22              	100.00%		L0PA30              	100.00%
Bootstrap support for P0CM22 as seed ortholog is 100%.
Bootstrap support for L0PA30 as seed ortholog is 100%.

Group of orthologs #24. Best score 1238 bits
Score difference with first non-orthologous sequence - C.neoformans:1238 P.jiroveci:1238

Q5KPX3              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	98.94%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #25. Best score 1235 bits
Score difference with first non-orthologous sequence - C.neoformans:1235 P.jiroveci:1235

Q5KBW5              	100.00%		L0PG53              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #26. Best score 1231 bits
Score difference with first non-orthologous sequence - C.neoformans:1231 P.jiroveci:1231

Q5KKH8              	100.00%		L0P928              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #27. Best score 1223 bits
Score difference with first non-orthologous sequence - C.neoformans:877 P.jiroveci:1223

Q5KIQ1              	100.00%		L0PBE4              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #28. Best score 1222 bits
Score difference with first non-orthologous sequence - C.neoformans:1222 P.jiroveci:1222

Q5KA48              	100.00%		L0PG12              	100.00%
Bootstrap support for Q5KA48 as seed ortholog is 100%.
Bootstrap support for L0PG12 as seed ortholog is 100%.

Group of orthologs #29. Best score 1216 bits
Score difference with first non-orthologous sequence - C.neoformans:1216 P.jiroveci:1216

Q5KIL9              	100.00%		L0PEU6              	100.00%
Bootstrap support for Q5KIL9 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #30. Best score 1209 bits
Score difference with first non-orthologous sequence - C.neoformans:589 P.jiroveci:1209

Q5KP96              	100.00%		L0PG61              	100.00%
Bootstrap support for Q5KP96 as seed ortholog is 100%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #31. Best score 1203 bits
Score difference with first non-orthologous sequence - C.neoformans:1203 P.jiroveci:1203

Q5KB97              	100.00%		L0PF80              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #32. Best score 1195 bits
Score difference with first non-orthologous sequence - C.neoformans:1195 P.jiroveci:1195

Q5KGK1              	100.00%		L0PBY6              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #33. Best score 1190 bits
Score difference with first non-orthologous sequence - C.neoformans:1190 P.jiroveci:1190

Q5KMH0              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	88.36%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #34. Best score 1187 bits
Score difference with first non-orthologous sequence - C.neoformans:827 P.jiroveci:692

Q5KGT3              	100.00%		L0PB13              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #35. Best score 1183 bits
Score difference with first non-orthologous sequence - C.neoformans:644 P.jiroveci:1183

Q5KHW3              	100.00%		L0PEW0              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #36. Best score 1165 bits
Score difference with first non-orthologous sequence - C.neoformans:1165 P.jiroveci:1165

Q5KCR8              	100.00%		L0PG21              	100.00%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #37. Best score 1155 bits
Score difference with first non-orthologous sequence - C.neoformans:751 P.jiroveci:619

Q5KKN7              	100.00%		L0PAJ7              	100.00%
Bootstrap support for Q5KKN7 as seed ortholog is 100%.
Bootstrap support for L0PAJ7 as seed ortholog is 100%.

Group of orthologs #38. Best score 1144 bits
Score difference with first non-orthologous sequence - C.neoformans:1144 P.jiroveci:1144

P0CP00              	100.00%		L0PH47              	100.00%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for L0PH47 as seed ortholog is 100%.

Group of orthologs #39. Best score 1095 bits
Score difference with first non-orthologous sequence - C.neoformans:1095 P.jiroveci:1095

Q5K7U0              	100.00%		L0P915              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #40. Best score 1075 bits
Score difference with first non-orthologous sequence - C.neoformans:704 P.jiroveci:1075

Q5KD67              	100.00%		L0PAG9              	100.00%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #41. Best score 1075 bits
Score difference with first non-orthologous sequence - C.neoformans:1075 P.jiroveci:501

Q5KMF6              	100.00%		L0PDB3              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #42. Best score 1074 bits
Score difference with first non-orthologous sequence - C.neoformans:1074 P.jiroveci:1074

Q5KD08              	100.00%		L0PAX4              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #43. Best score 1073 bits
Score difference with first non-orthologous sequence - C.neoformans:868 P.jiroveci:1073

Q5KDF5              	100.00%		L0PGL8              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #44. Best score 1044 bits
Score difference with first non-orthologous sequence - C.neoformans:1044 P.jiroveci:1044

Q5KF97              	100.00%		L0PDQ4              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #45. Best score 1041 bits
Score difference with first non-orthologous sequence - C.neoformans:892 P.jiroveci:1041

Q5KIH7              	100.00%		L0PC93              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #46. Best score 1038 bits
Score difference with first non-orthologous sequence - C.neoformans:1038 P.jiroveci:1038

Q5KL19              	100.00%		L0P7P6              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #47. Best score 1034 bits
Score difference with first non-orthologous sequence - C.neoformans:268 P.jiroveci:1034

Q5KI71              	100.00%		L0PAC9              	100.00%
Bootstrap support for Q5KI71 as seed ortholog is 99%.
Bootstrap support for L0PAC9 as seed ortholog is 100%.

Group of orthologs #48. Best score 1026 bits
Score difference with first non-orthologous sequence - C.neoformans:1026 P.jiroveci:1026

Q5KG64              	100.00%		L0P9F0              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #49. Best score 1010 bits
Score difference with first non-orthologous sequence - C.neoformans:787 P.jiroveci:1010

Q5KCV6              	100.00%		L0PCW9              	100.00%
Bootstrap support for Q5KCV6 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #50. Best score 1005 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.jiroveci:1005

Q5KIK6              	100.00%		L0PFN4              	100.00%
Bootstrap support for Q5KIK6 as seed ortholog is 99%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #51. Best score 1002 bits
Score difference with first non-orthologous sequence - C.neoformans:848 P.jiroveci:1002

Q5KIS3              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	80.28%
Bootstrap support for Q5KIS3 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.

Group of orthologs #52. Best score 1001 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:1001

Q5KKM4              	100.00%		L0PEK6              	100.00%
Q5KKP4              	76.95%		
Bootstrap support for Q5KKM4 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #53. Best score 994 bits
Score difference with first non-orthologous sequence - C.neoformans:994 P.jiroveci:994

Q5KBA0              	100.00%		L0P9H4              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #54. Best score 992 bits
Score difference with first non-orthologous sequence - C.neoformans:992 P.jiroveci:992

Q5KM99              	100.00%		L0PC43              	100.00%
                    	       		L0PCW3              	40.69%
Bootstrap support for Q5KM99 as seed ortholog is 100%.
Bootstrap support for L0PC43 as seed ortholog is 100%.

Group of orthologs #55. Best score 992 bits
Score difference with first non-orthologous sequence - C.neoformans:992 P.jiroveci:992

Q5KNR6              	100.00%		L0PD55              	100.00%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #56. Best score 990 bits
Score difference with first non-orthologous sequence - C.neoformans:990 P.jiroveci:990

Q5KGH2              	100.00%		L0P710              	100.00%
Bootstrap support for Q5KGH2 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #57. Best score 980 bits
Score difference with first non-orthologous sequence - C.neoformans:717 P.jiroveci:980

Q5KH77              	100.00%		L0PBL6              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #58. Best score 978 bits
Score difference with first non-orthologous sequence - C.neoformans:807 P.jiroveci:978

Q5K9G4              	100.00%		L0PEL5              	100.00%
                    	       		L0PGC2              	42.88%
Bootstrap support for Q5K9G4 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #59. Best score 965 bits
Score difference with first non-orthologous sequence - C.neoformans:860 P.jiroveci:965

Q5KIF1              	100.00%		L0PIF0              	100.00%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #60. Best score 964 bits
Score difference with first non-orthologous sequence - C.neoformans:559 P.jiroveci:964

Q5K7R6              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	65.70%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #61. Best score 953 bits
Score difference with first non-orthologous sequence - C.neoformans:953 P.jiroveci:953

Q5KIF6              	100.00%		L0PAP2              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #62. Best score 945 bits
Score difference with first non-orthologous sequence - C.neoformans:945 P.jiroveci:945

Q5KJ92              	100.00%		L0PBJ8              	100.00%
Bootstrap support for Q5KJ92 as seed ortholog is 100%.
Bootstrap support for L0PBJ8 as seed ortholog is 100%.

Group of orthologs #63. Best score 942 bits
Score difference with first non-orthologous sequence - C.neoformans:942 P.jiroveci:942

Q5KNS5              	100.00%		L0PF72              	100.00%
Bootstrap support for Q5KNS5 as seed ortholog is 100%.
Bootstrap support for L0PF72 as seed ortholog is 100%.

Group of orthologs #64. Best score 941 bits
Score difference with first non-orthologous sequence - C.neoformans:941 P.jiroveci:941

Q5KGN0              	100.00%		L0PEB1              	100.00%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for L0PEB1 as seed ortholog is 100%.

Group of orthologs #65. Best score 927 bits
Score difference with first non-orthologous sequence - C.neoformans:670 P.jiroveci:927

Q5KB00              	100.00%		L0PCD5              	100.00%
Bootstrap support for Q5KB00 as seed ortholog is 100%.
Bootstrap support for L0PCD5 as seed ortholog is 100%.

Group of orthologs #66. Best score 925 bits
Score difference with first non-orthologous sequence - C.neoformans:925 P.jiroveci:925

Q5KEV3              	100.00%		L0PG27              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #67. Best score 923 bits
Score difference with first non-orthologous sequence - C.neoformans:545 P.jiroveci:443

Q5KEX1              	100.00%		L0PFC8              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #68. Best score 921 bits
Score difference with first non-orthologous sequence - C.neoformans:747 P.jiroveci:921

P0CO16              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	20.33%
Bootstrap support for P0CO16 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 100%.

Group of orthologs #69. Best score 918 bits
Score difference with first non-orthologous sequence - C.neoformans:918 P.jiroveci:918

Q5KDY4              	100.00%		L0PA62              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #70. Best score 914 bits
Score difference with first non-orthologous sequence - C.neoformans:914 P.jiroveci:914

Q5KJI1              	100.00%		L0PDI4              	100.00%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #71. Best score 913 bits
Score difference with first non-orthologous sequence - C.neoformans:913 P.jiroveci:913

Q5KLE4              	100.00%		L0P7V0              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #72. Best score 911 bits
Score difference with first non-orthologous sequence - C.neoformans:911 P.jiroveci:911

Q5KQ07              	100.00%		L0PBV5              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #73. Best score 909 bits
Score difference with first non-orthologous sequence - C.neoformans:909 P.jiroveci:909

Q5KAT3              	100.00%		L0PDF3              	100.00%
Bootstrap support for Q5KAT3 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #74. Best score 907 bits
Score difference with first non-orthologous sequence - C.neoformans:907 P.jiroveci:390

Q5KJ25              	100.00%		L0P8X7              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for L0P8X7 as seed ortholog is 100%.

Group of orthologs #75. Best score 902 bits
Score difference with first non-orthologous sequence - C.neoformans:902 P.jiroveci:902

Q5KAR2              	100.00%		L0PAV3              	100.00%
Bootstrap support for Q5KAR2 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #76. Best score 893 bits
Score difference with first non-orthologous sequence - C.neoformans:893 P.jiroveci:893

Q5KBX3              	100.00%		L0PB85              	100.00%
Bootstrap support for Q5KBX3 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #77. Best score 891 bits
Score difference with first non-orthologous sequence - C.neoformans:891 P.jiroveci:891

Q5KKE3              	100.00%		L0P9H5              	100.00%
                    	       		L0P8S4              	39.41%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for L0P9H5 as seed ortholog is 100%.

Group of orthologs #78. Best score 890 bits
Score difference with first non-orthologous sequence - C.neoformans:890 P.jiroveci:890

Q5KDD4              	100.00%		L0PBF3              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #79. Best score 888 bits
Score difference with first non-orthologous sequence - C.neoformans:387 P.jiroveci:888

Q5K8W5              	100.00%		L0PFS2              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #80. Best score 871 bits
Score difference with first non-orthologous sequence - C.neoformans:871 P.jiroveci:871

Q5KI75              	100.00%		L0P8M6              	100.00%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #81. Best score 871 bits
Score difference with first non-orthologous sequence - C.neoformans:237 P.jiroveci:871

Q5KIM6              	100.00%		L0PDF8              	100.00%
Bootstrap support for Q5KIM6 as seed ortholog is 99%.
Bootstrap support for L0PDF8 as seed ortholog is 100%.

Group of orthologs #82. Best score 870 bits
Score difference with first non-orthologous sequence - C.neoformans:870 P.jiroveci:870

Q5KLG5              	100.00%		L0PG32              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #83. Best score 869 bits
Score difference with first non-orthologous sequence - C.neoformans:734 P.jiroveci:575

P0CN32              	100.00%		L0PBP8              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #84. Best score 861 bits
Score difference with first non-orthologous sequence - C.neoformans:861 P.jiroveci:861

Q5KGV5              	100.00%		L0PH89              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #85. Best score 857 bits
Score difference with first non-orthologous sequence - C.neoformans:714 P.jiroveci:597

Q5KII1              	100.00%		L0PE26              	100.00%
Bootstrap support for Q5KII1 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #86. Best score 856 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.jiroveci:856

Q5K6Z6              	100.00%		L0PFV0              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 100%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #87. Best score 852 bits
Score difference with first non-orthologous sequence - C.neoformans:852 P.jiroveci:852

Q5KF07              	100.00%		L0PAQ3              	100.00%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #88. Best score 851 bits
Score difference with first non-orthologous sequence - C.neoformans:851 P.jiroveci:851

Q5KML2              	100.00%		L0P7K0              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #89. Best score 850 bits
Score difference with first non-orthologous sequence - C.neoformans:850 P.jiroveci:850

Q5KDU2              	100.00%		L0P9R9              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #90. Best score 836 bits
Score difference with first non-orthologous sequence - C.neoformans:836 P.jiroveci:836

Q5KNM9              	100.00%		L0P7X5              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #91. Best score 835 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.jiroveci:835

Q5KJ21              	100.00%		L0PF66              	100.00%
Bootstrap support for Q5KJ21 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #92. Best score 834 bits
Score difference with first non-orthologous sequence - C.neoformans:834 P.jiroveci:834

Q5K7N5              	100.00%		L0PD31              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #93. Best score 832 bits
Score difference with first non-orthologous sequence - C.neoformans:345 P.jiroveci:832

Q5KEI8              	100.00%		L0PGZ9              	100.00%
Bootstrap support for Q5KEI8 as seed ortholog is 100%.
Bootstrap support for L0PGZ9 as seed ortholog is 100%.

Group of orthologs #94. Best score 832 bits
Score difference with first non-orthologous sequence - C.neoformans:832 P.jiroveci:832

Q5KQ25              	100.00%		L0PAN4              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #95. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:829 P.jiroveci:676

Q5KPM2              	100.00%		L0PBQ6              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #96. Best score 827 bits
Score difference with first non-orthologous sequence - C.neoformans:827 P.jiroveci:827

P0CQ16              	100.00%		L0PEK9              	100.00%
Bootstrap support for P0CQ16 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #97. Best score 825 bits
Score difference with first non-orthologous sequence - C.neoformans:825 P.jiroveci:825

Q5KFJ3              	100.00%		L0PG07              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #98. Best score 822 bits
Score difference with first non-orthologous sequence - C.neoformans:822 P.jiroveci:822

Q5KBP7              	100.00%		L0PFJ0              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #99. Best score 822 bits
Score difference with first non-orthologous sequence - C.neoformans:759 P.jiroveci:822

Q5KN88              	100.00%		L0PDF1              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #100. Best score 814 bits
Score difference with first non-orthologous sequence - C.neoformans:814 P.jiroveci:814

Q5KJ33              	100.00%		L0PC37              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #101. Best score 810 bits
Score difference with first non-orthologous sequence - C.neoformans:810 P.jiroveci:810

Q5K7B4              	100.00%		L0PE57              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #102. Best score 810 bits
Score difference with first non-orthologous sequence - C.neoformans:810 P.jiroveci:810

Q5K972              	100.00%		L0PDS0              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #103. Best score 808 bits
Score difference with first non-orthologous sequence - C.neoformans:808 P.jiroveci:808

P0CQ22              	100.00%		L0PDK6              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #104. Best score 804 bits
Score difference with first non-orthologous sequence - C.neoformans:804 P.jiroveci:804

P0CR40              	100.00%		L0PAS3              	100.00%
Bootstrap support for P0CR40 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #105. Best score 801 bits
Score difference with first non-orthologous sequence - C.neoformans:801 P.jiroveci:801

Q5KJT2              	100.00%		L0P9W2              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #106. Best score 800 bits
Score difference with first non-orthologous sequence - C.neoformans:800 P.jiroveci:800

Q5KII0              	100.00%		L0PAS8              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #107. Best score 795 bits
Score difference with first non-orthologous sequence - C.neoformans:392 P.jiroveci:795

Q5KHM9              	100.00%		L0PFZ9              	100.00%
Bootstrap support for Q5KHM9 as seed ortholog is 100%.
Bootstrap support for L0PFZ9 as seed ortholog is 100%.

Group of orthologs #108. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:792 P.jiroveci:792

Q5K9S3              	100.00%		L0PFF9              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #109. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:594 P.jiroveci:786

Q5KIC0              	100.00%		L0PFW1              	100.00%
Bootstrap support for Q5KIC0 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 100%.

Group of orthologs #110. Best score 785 bits
Score difference with first non-orthologous sequence - C.neoformans:785 P.jiroveci:785

Q5KMJ4              	100.00%		L0PBY5              	100.00%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #111. Best score 784 bits
Score difference with first non-orthologous sequence - C.neoformans:784 P.jiroveci:784

Q5K754              	100.00%		L0PC54              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #112. Best score 784 bits
Score difference with first non-orthologous sequence - C.neoformans:784 P.jiroveci:784

Q5KIN6              	100.00%		L0PC79              	100.00%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #113. Best score 784 bits
Score difference with first non-orthologous sequence - C.neoformans:784 P.jiroveci:784

Q5KHP4              	100.00%		L0PGU1              	100.00%
Bootstrap support for Q5KHP4 as seed ortholog is 100%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #114. Best score 781 bits
Score difference with first non-orthologous sequence - C.neoformans:705 P.jiroveci:781

P0CN30              	100.00%		L0PBA5              	100.00%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #115. Best score 779 bits
Score difference with first non-orthologous sequence - C.neoformans:779 P.jiroveci:779

Q5KLW7              	100.00%		L0PDM6              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #116. Best score 778 bits
Score difference with first non-orthologous sequence - C.neoformans:580 P.jiroveci:503

P0CO18              	100.00%		L0PB83              	100.00%
Bootstrap support for P0CO18 as seed ortholog is 100%.
Bootstrap support for L0PB83 as seed ortholog is 100%.

Group of orthologs #117. Best score 778 bits
Score difference with first non-orthologous sequence - C.neoformans:778 P.jiroveci:778

Q5K8Q4              	100.00%		L0PCS2              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #118. Best score 777 bits
Score difference with first non-orthologous sequence - C.neoformans:777 P.jiroveci:777

P0CO10              	100.00%		L0P7V1              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #119. Best score 771 bits
Score difference with first non-orthologous sequence - C.neoformans:771 P.jiroveci:771

Q5KAN4              	100.00%		L0PEQ8              	100.00%
Bootstrap support for Q5KAN4 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #120. Best score 767 bits
Score difference with first non-orthologous sequence - C.neoformans:767 P.jiroveci:767

Q5KHJ6              	100.00%		L0PES6              	100.00%
Bootstrap support for Q5KHJ6 as seed ortholog is 100%.
Bootstrap support for L0PES6 as seed ortholog is 100%.

Group of orthologs #121. Best score 766 bits
Score difference with first non-orthologous sequence - C.neoformans:545 P.jiroveci:766

Q5KL42              	100.00%		L0P945              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #122. Best score 764 bits
Score difference with first non-orthologous sequence - C.neoformans:764 P.jiroveci:292

Q5KFB9              	100.00%		L0P833              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #123. Best score 762 bits
Score difference with first non-orthologous sequence - C.neoformans:542 P.jiroveci:762

Q5KQ47              	100.00%		L0PGA5              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #124. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.jiroveci:759

Q5KDZ1              	100.00%		L0P9C7              	100.00%
Bootstrap support for Q5KDZ1 as seed ortholog is 99%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #125. Best score 754 bits
Score difference with first non-orthologous sequence - C.neoformans:527 P.jiroveci:754

Q5KPI3              	100.00%		L0PG45              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #126. Best score 752 bits
Score difference with first non-orthologous sequence - C.neoformans:311 P.jiroveci:752

Q5KAF1              	100.00%		L0PGE8              	100.00%
Bootstrap support for Q5KAF1 as seed ortholog is 100%.
Bootstrap support for L0PGE8 as seed ortholog is 100%.

Group of orthologs #127. Best score 750 bits
Score difference with first non-orthologous sequence - C.neoformans:750 P.jiroveci:750

Q5KEF7              	100.00%		L0P8G2              	100.00%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #128. Best score 750 bits
Score difference with first non-orthologous sequence - C.neoformans:750 P.jiroveci:750

Q5KLA1              	100.00%		L0PC65              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #129. Best score 747 bits
Score difference with first non-orthologous sequence - C.neoformans:747 P.jiroveci:747

Q5K8L8              	100.00%		L0PA41              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #130. Best score 745 bits
Score difference with first non-orthologous sequence - C.neoformans:521 P.jiroveci:745

Q5K9H1              	100.00%		L0P976              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #131. Best score 745 bits
Score difference with first non-orthologous sequence - C.neoformans:745 P.jiroveci:745

Q5KJN5              	100.00%		L0PBM4              	100.00%
Bootstrap support for Q5KJN5 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #132. Best score 744 bits
Score difference with first non-orthologous sequence - C.neoformans:744 P.jiroveci:744

Q5KH73              	100.00%		L0PBD7              	100.00%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #133. Best score 738 bits
Score difference with first non-orthologous sequence - C.neoformans:663 P.jiroveci:738

Q5KM64              	100.00%		L0PBH3              	100.00%
Bootstrap support for Q5KM64 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #134. Best score 738 bits
Score difference with first non-orthologous sequence - C.neoformans:738 P.jiroveci:738

Q5KKE9              	100.00%		L0PFC2              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #135. Best score 733 bits
Score difference with first non-orthologous sequence - C.neoformans:733 P.jiroveci:733

Q5KB99              	100.00%		L0P7T0              	100.00%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #136. Best score 732 bits
Score difference with first non-orthologous sequence - C.neoformans:732 P.jiroveci:732

Q5K7P1              	100.00%		L0PCC4              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #137. Best score 731 bits
Score difference with first non-orthologous sequence - C.neoformans:614 P.jiroveci:731

Q5KMN3              	100.00%		L0PEP7              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #138. Best score 730 bits
Score difference with first non-orthologous sequence - C.neoformans:730 P.jiroveci:730

Q5KMU3              	100.00%		L0P9U5              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #139. Best score 729 bits
Score difference with first non-orthologous sequence - C.neoformans:729 P.jiroveci:729

Q5KPQ9              	100.00%		L0PGT9              	100.00%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #140. Best score 728 bits
Score difference with first non-orthologous sequence - C.neoformans:459 P.jiroveci:605

Q5KHJ9              	100.00%		L0P8C8              	100.00%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 100%.

Group of orthologs #141. Best score 725 bits
Score difference with first non-orthologous sequence - C.neoformans:725 P.jiroveci:725

Q5KHZ4              	100.00%		L0PBW1              	100.00%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #142. Best score 725 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:725

Q5KKE7              	100.00%		L0PBR4              	100.00%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #143. Best score 724 bits
Score difference with first non-orthologous sequence - C.neoformans:724 P.jiroveci:724

Q5KIZ9              	100.00%		L0PDI6              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #144. Best score 723 bits
Score difference with first non-orthologous sequence - C.neoformans:723 P.jiroveci:723

Q5KAX5              	100.00%		L0P773              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #145. Best score 723 bits
Score difference with first non-orthologous sequence - C.neoformans:723 P.jiroveci:723

Q5KGF8              	100.00%		L0PDM0              	100.00%
Bootstrap support for Q5KGF8 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #146. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:570 P.jiroveci:722

Q5KBI1              	100.00%		L0PGS4              	100.00%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #147. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:722 P.jiroveci:638

Q5KM37              	100.00%		L0PBW7              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #148. Best score 721 bits
Score difference with first non-orthologous sequence - C.neoformans:721 P.jiroveci:721

Q5K9B2              	100.00%		L0PF68              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #149. Best score 720 bits
Score difference with first non-orthologous sequence - C.neoformans:720 P.jiroveci:720

P0CM96              	100.00%		L0PBJ1              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #150. Best score 719 bits
Score difference with first non-orthologous sequence - C.neoformans:719 P.jiroveci:719

Q5KLP9              	100.00%		L0P6X8              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #151. Best score 716 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.jiroveci:229

Q5KMH9              	100.00%		L0P9U6              	100.00%
Bootstrap support for Q5KMH9 as seed ortholog is 100%.
Bootstrap support for L0P9U6 as seed ortholog is 99%.

Group of orthologs #152. Best score 715 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.jiroveci:624

P0CQ84              	100.00%		L0P8E7              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #153. Best score 708 bits
Score difference with first non-orthologous sequence - C.neoformans:541 P.jiroveci:708

Q5KKV8              	100.00%		L0P9J9              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 100%.
Bootstrap support for L0P9J9 as seed ortholog is 100%.

Group of orthologs #154. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:706 P.jiroveci:706

Q5KEN6              	100.00%		L0PAN9              	100.00%
                    	       		L0PID8              	80.14%
Bootstrap support for Q5KEN6 as seed ortholog is 100%.
Bootstrap support for L0PAN9 as seed ortholog is 100%.

Group of orthologs #155. Best score 705 bits
Score difference with first non-orthologous sequence - C.neoformans:477 P.jiroveci:705

Q5KLI3              	100.00%		L0PG19              	100.00%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #156. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:451 P.jiroveci:347

Q5KKP2              	100.00%		L0PEK2              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 100%.
Bootstrap support for L0PEK2 as seed ortholog is 100%.

Group of orthologs #157. Best score 702 bits
Score difference with first non-orthologous sequence - C.neoformans:702 P.jiroveci:702

Q5KKR7              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	93.22%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #158. Best score 701 bits
Score difference with first non-orthologous sequence - C.neoformans:701 P.jiroveci:701

Q5KFR0              	100.00%		L0PBT3              	100.00%
Bootstrap support for Q5KFR0 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #159. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 P.jiroveci:700

P0CM60              	100.00%		L0PEL1              	100.00%
Bootstrap support for P0CM60 as seed ortholog is 100%.
Bootstrap support for L0PEL1 as seed ortholog is 100%.

Group of orthologs #160. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 P.jiroveci:700

Q5KIL6              	100.00%		L0P7V2              	100.00%
Bootstrap support for Q5KIL6 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #161. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:509 P.jiroveci:700

Q5KP40              	100.00%		L0PER6              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #162. Best score 695 bits
Score difference with first non-orthologous sequence - C.neoformans:695 P.jiroveci:695

P0CQ08              	100.00%		L0PDD5              	100.00%
Bootstrap support for P0CQ08 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #163. Best score 692 bits
Score difference with first non-orthologous sequence - C.neoformans:692 P.jiroveci:692

Q5KI64              	100.00%		L0P971              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #164. Best score 691 bits
Score difference with first non-orthologous sequence - C.neoformans:691 P.jiroveci:691

Q5KK44              	100.00%		L0P9S1              	100.00%
Q5KK43              	44.58%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #165. Best score 691 bits
Score difference with first non-orthologous sequence - C.neoformans:691 P.jiroveci:691

Q5KHN9              	100.00%		L0PGB8              	100.00%
Bootstrap support for Q5KHN9 as seed ortholog is 100%.
Bootstrap support for L0PGB8 as seed ortholog is 100%.

Group of orthologs #166. Best score 690 bits
Score difference with first non-orthologous sequence - C.neoformans:690 P.jiroveci:690

Q5KKQ6              	100.00%		L0PB98              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for L0PB98 as seed ortholog is 100%.

Group of orthologs #167. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 P.jiroveci:686

Q5K7Q2              	100.00%		L0PIC6              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for L0PIC6 as seed ortholog is 100%.

Group of orthologs #168. Best score 677 bits
Score difference with first non-orthologous sequence - C.neoformans:677 P.jiroveci:677

Q5K6X3              	100.00%		L0PCV7              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #169. Best score 677 bits
Score difference with first non-orthologous sequence - C.neoformans:677 P.jiroveci:677

Q5KP44              	100.00%		L0P7N3              	100.00%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #170. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.jiroveci:570

P0CQ74              	100.00%		L0PDY0              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #171. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 P.jiroveci:672

Q5KCZ2              	100.00%		L0PB96              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #172. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 P.jiroveci:672

Q5KNE3              	100.00%		L0PBN0              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #173. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:671 P.jiroveci:671

Q5KML9              	100.00%		L0PB32              	100.00%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for L0PB32 as seed ortholog is 100%.

Group of orthologs #174. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:585 P.jiroveci:607

Q5KP06              	100.00%		L0PA91              	100.00%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #175. Best score 668 bits
Score difference with first non-orthologous sequence - C.neoformans:432 P.jiroveci:668

Q5K7L0              	100.00%		L0PBI1              	100.00%
Bootstrap support for Q5K7L0 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #176. Best score 665 bits
Score difference with first non-orthologous sequence - C.neoformans:665 P.jiroveci:337

Q5KBB1              	100.00%		L0PFG7              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #177. Best score 665 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.jiroveci:665

Q5KIZ1              	100.00%		L0P8U1              	100.00%
Bootstrap support for Q5KIZ1 as seed ortholog is 100%.
Bootstrap support for L0P8U1 as seed ortholog is 100%.

Group of orthologs #178. Best score 662 bits
Score difference with first non-orthologous sequence - C.neoformans:662 P.jiroveci:662

P0CL88              	100.00%		L0PA85              	100.00%
Bootstrap support for P0CL88 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #179. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 P.jiroveci:654

Q5KPJ1              	100.00%		L0PEU4              	100.00%
Bootstrap support for Q5KPJ1 as seed ortholog is 100%.
Bootstrap support for L0PEU4 as seed ortholog is 100%.

Group of orthologs #180. Best score 652 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.jiroveci:652

P0CQ98              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.
Bootstrap support for L0PCI7 as seed ortholog is 100%.

Group of orthologs #181. Best score 650 bits
Score difference with first non-orthologous sequence - C.neoformans:650 P.jiroveci:650

Q5KB69              	100.00%		L0PFF6              	100.00%
Bootstrap support for Q5KB69 as seed ortholog is 100%.
Bootstrap support for L0PFF6 as seed ortholog is 100%.

Group of orthologs #182. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 P.jiroveci:646

Q5KIH6              	100.00%		L0P8W6              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #183. Best score 645 bits
Score difference with first non-orthologous sequence - C.neoformans:645 P.jiroveci:645

Q5K7K5              	100.00%		L0PB97              	100.00%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #184. Best score 644 bits
Score difference with first non-orthologous sequence - C.neoformans:441 P.jiroveci:337

Q5K960              	100.00%		L0P850              	100.00%
Bootstrap support for Q5K960 as seed ortholog is 100%.
Bootstrap support for L0P850 as seed ortholog is 100%.

Group of orthologs #185. Best score 642 bits
Score difference with first non-orthologous sequence - C.neoformans:642 P.jiroveci:642

Q5KJ87              	100.00%		L0PDJ1              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #186. Best score 642 bits
Score difference with first non-orthologous sequence - C.neoformans:642 P.jiroveci:642

Q5KQ45              	100.00%		L0PDR3              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #187. Best score 639 bits
Score difference with first non-orthologous sequence - C.neoformans:639 P.jiroveci:639

Q5K9E9              	100.00%		L0PAQ1              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #188. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:406 P.jiroveci:470

Q5KEJ1              	100.00%		L0PB67              	100.00%
Bootstrap support for Q5KEJ1 as seed ortholog is 100%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #189. Best score 635 bits
Score difference with first non-orthologous sequence - C.neoformans:635 P.jiroveci:635

P0CR72              	100.00%		L0PAP1              	100.00%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #190. Best score 632 bits
Score difference with first non-orthologous sequence - C.neoformans:632 P.jiroveci:632

Q5K745              	100.00%		L0PBN5              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #191. Best score 631 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.jiroveci:546

P0CQ80              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	50.94%
Bootstrap support for P0CQ80 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #192. Best score 631 bits
Score difference with first non-orthologous sequence - C.neoformans:631 P.jiroveci:631

P0CN44              	100.00%		L0P9U3              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #193. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:629 P.jiroveci:629

Q5KFS5              	100.00%		L0PA45              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #194. Best score 627 bits
Score difference with first non-orthologous sequence - C.neoformans:627 P.jiroveci:627

Q5KJX8              	100.00%		L0P958              	100.00%
Bootstrap support for Q5KJX8 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #195. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:558 P.jiroveci:626

P0CP46              	100.00%		L0P802              	100.00%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #196. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 P.jiroveci:626

Q5KF37              	100.00%		L0P8F1              	100.00%
Bootstrap support for Q5KF37 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #197. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 P.jiroveci:626

Q5KJH8              	100.00%		L0PBL0              	100.00%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for L0PBL0 as seed ortholog is 100%.

Group of orthologs #198. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 P.jiroveci:626

Q5KLD7              	100.00%		L0PAG2              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for L0PAG2 as seed ortholog is 100%.

Group of orthologs #199. Best score 625 bits
Score difference with first non-orthologous sequence - C.neoformans:372 P.jiroveci:625

Q5K9Z4              	100.00%		L0PAR0              	100.00%
Bootstrap support for Q5K9Z4 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #200. Best score 625 bits
Score difference with first non-orthologous sequence - C.neoformans:497 P.jiroveci:625

Q5KDW0              	100.00%		L0PA75              	100.00%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #201. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:624 P.jiroveci:624

Q5KHP3              	100.00%		L0PAN3              	100.00%
Bootstrap support for Q5KHP3 as seed ortholog is 100%.
Bootstrap support for L0PAN3 as seed ortholog is 100%.

Group of orthologs #202. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:624 P.jiroveci:624

Q5KDR3              	100.00%		L0PFT7              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #203. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:624 P.jiroveci:624

Q5KQ22              	100.00%		L0PED9              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #204. Best score 623 bits
Score difference with first non-orthologous sequence - C.neoformans:623 P.jiroveci:623

Q5KME1              	100.00%		L0PBH4              	100.00%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #205. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:619 P.jiroveci:478

Q5KI17              	100.00%		L0PEZ3              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for L0PEZ3 as seed ortholog is 100%.

Group of orthologs #206. Best score 618 bits
Score difference with first non-orthologous sequence - C.neoformans:618 P.jiroveci:618

Q5KGD7              	100.00%		L0PEA0              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #207. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.jiroveci:617

Q5KED3              	100.00%		L0P905              	100.00%
Q5KJN9              	5.15%		
Bootstrap support for Q5KED3 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #208. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:617 P.jiroveci:617

Q5KKZ7              	100.00%		L0PFJ6              	100.00%
Bootstrap support for Q5KKZ7 as seed ortholog is 100%.
Bootstrap support for L0PFJ6 as seed ortholog is 100%.

Group of orthologs #209. Best score 616 bits
Score difference with first non-orthologous sequence - C.neoformans:396 P.jiroveci:616

Q5KNV9              	100.00%		L0PAF4              	100.00%
Bootstrap support for Q5KNV9 as seed ortholog is 100%.
Bootstrap support for L0PAF4 as seed ortholog is 100%.

Group of orthologs #210. Best score 614 bits
Score difference with first non-orthologous sequence - C.neoformans:614 P.jiroveci:614

Q5K9E3              	100.00%		L0P9D4              	100.00%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #211. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:442 P.jiroveci:613

Q5KHN7              	100.00%		L0P7Y5              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #212. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:613 P.jiroveci:613

Q5KMG4              	100.00%		L0PDU2              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #213. Best score 612 bits
Score difference with first non-orthologous sequence - C.neoformans:504 P.jiroveci:612

Q5KJC6              	100.00%		L0PAA4              	100.00%
Bootstrap support for Q5KJC6 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #214. Best score 610 bits
Score difference with first non-orthologous sequence - C.neoformans:610 P.jiroveci:610

Q5K9R3              	100.00%		L0PHB7              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #215. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:600 P.jiroveci:600

Q5KCZ4              	100.00%		L0PG37              	100.00%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #216. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:600 P.jiroveci:600

Q5KMQ2              	100.00%		L0PC44              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #217. Best score 599 bits
Score difference with first non-orthologous sequence - C.neoformans:599 P.jiroveci:463

Q5K6Z8              	100.00%		L0PCD8              	100.00%
Bootstrap support for Q5K6Z8 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #218. Best score 598 bits
Score difference with first non-orthologous sequence - C.neoformans:335 P.jiroveci:519

P0CQ88              	100.00%		L0PCT0              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 100%.
Bootstrap support for L0PCT0 as seed ortholog is 100%.

Group of orthologs #219. Best score 591 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.jiroveci:591

Q5K8Q3              	100.00%		L0P8L4              	100.00%
Bootstrap support for Q5K8Q3 as seed ortholog is 100%.
Bootstrap support for L0P8L4 as seed ortholog is 100%.

Group of orthologs #220. Best score 591 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.jiroveci:591

Q5KMR6              	100.00%		L0PBU4              	100.00%
Bootstrap support for Q5KMR6 as seed ortholog is 100%.
Bootstrap support for L0PBU4 as seed ortholog is 100%.

Group of orthologs #221. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 P.jiroveci:589

Q5KGM7              	100.00%		L0P8Z9              	100.00%
Bootstrap support for Q5KGM7 as seed ortholog is 100%.
Bootstrap support for L0P8Z9 as seed ortholog is 100%.

Group of orthologs #222. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:586 P.jiroveci:586

Q5KH01              	100.00%		L0PEZ0              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #223. Best score 581 bits
Score difference with first non-orthologous sequence - C.neoformans:581 P.jiroveci:581

Q5KKV6              	100.00%		L0PES7              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #224. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 P.jiroveci:579

Q5KII4              	100.00%		L0PCA7              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #225. Best score 578 bits
Score difference with first non-orthologous sequence - C.neoformans:508 P.jiroveci:578

Q5KDQ7              	100.00%		L0P9G2              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #226. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:577 P.jiroveci:577

P0CN46              	100.00%		L0P6R7              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #227. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.jiroveci:433

P0CQ72              	100.00%		L0PC64              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 100%.

Group of orthologs #228. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:435 P.jiroveci:576

Q5KN74              	100.00%		L0PC99              	100.00%
Bootstrap support for Q5KN74 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #229. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 P.jiroveci:574

Q5KGH3              	100.00%		L0P7D9              	100.00%
Bootstrap support for Q5KGH3 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #230. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 P.jiroveci:574

Q5K8W1              	100.00%		L0PFJ5              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #231. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:571 P.jiroveci:571

Q5K9N8              	100.00%		L0PE52              	100.00%
                    	       		L0PIN5              	43.57%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #232. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 P.jiroveci:569

Q5KCP4              	100.00%		L0PB44              	100.00%
Bootstrap support for Q5KCP4 as seed ortholog is 100%.
Bootstrap support for L0PB44 as seed ortholog is 100%.

Group of orthologs #233. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.jiroveci:49

Q5KF65              	100.00%		L0PGY9              	100.00%
Bootstrap support for Q5KF65 as seed ortholog is 99%.
Bootstrap support for L0PGY9 as seed ortholog is 90%.

Group of orthologs #234. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:436 P.jiroveci:449

Q5KF69              	100.00%		L0PE30              	100.00%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #235. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:351 P.jiroveci:564

Q5KE89              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 100%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #236. Best score 561 bits
Score difference with first non-orthologous sequence - C.neoformans:561 P.jiroveci:561

Q5KFJ4              	100.00%		L0P7N1              	100.00%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #237. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:560 P.jiroveci:560

P0CR70              	100.00%		L0PCQ7              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #238. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.jiroveci:560

Q5KB11              	100.00%		L0PFQ5              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #239. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:560 P.jiroveci:560

Q5KIA5              	100.00%		L0P9B6              	100.00%
Bootstrap support for Q5KIA5 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #240. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.jiroveci:500

Q5KI40              	100.00%		L0P890              	100.00%
Bootstrap support for Q5KI40 as seed ortholog is 100%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #241. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:557 P.jiroveci:557

Q5K7C3              	100.00%		L0P917              	100.00%
                    	       		L0PF20              	86.24%
Bootstrap support for Q5K7C3 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #242. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:557 P.jiroveci:557

Q5KP62              	100.00%		L0PBR9              	100.00%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #243. Best score 555 bits
Score difference with first non-orthologous sequence - C.neoformans:555 P.jiroveci:555

Q5KJM5              	100.00%		L0P961              	100.00%
Bootstrap support for Q5KJM5 as seed ortholog is 100%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #244. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 P.jiroveci:554

Q5KK07              	100.00%		L0PA94              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for L0PA94 as seed ortholog is 100%.

Group of orthologs #245. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 P.jiroveci:554

Q5KMS5              	100.00%		L0PAE9              	100.00%
Bootstrap support for Q5KMS5 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #246. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 P.jiroveci:552

Q5KDW8              	100.00%		L0P8U6              	100.00%
Bootstrap support for Q5KDW8 as seed ortholog is 100%.
Bootstrap support for L0P8U6 as seed ortholog is 100%.

Group of orthologs #247. Best score 550 bits
Score difference with first non-orthologous sequence - C.neoformans:550 P.jiroveci:550

Q5K7X0              	100.00%		L0P9V7              	100.00%
Bootstrap support for Q5K7X0 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #248. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:455 P.jiroveci:548

Q5KGK2              	100.00%		L0PHY6              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #249. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 P.jiroveci:547

Q5K9C7              	100.00%		L0P9J8              	100.00%
Bootstrap support for Q5K9C7 as seed ortholog is 100%.
Bootstrap support for L0P9J8 as seed ortholog is 100%.

Group of orthologs #250. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 P.jiroveci:547

Q5KKA5              	100.00%		L0P9C8              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #251. Best score 546 bits
Score difference with first non-orthologous sequence - C.neoformans:446 P.jiroveci:546

Q5KLS2              	100.00%		L0PBF6              	100.00%
Bootstrap support for Q5KLS2 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #252. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 P.jiroveci:545

Q5KL65              	100.00%		L0P7P9              	100.00%
Bootstrap support for Q5KL65 as seed ortholog is 100%.
Bootstrap support for L0P7P9 as seed ortholog is 100%.

Group of orthologs #253. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.jiroveci:111

Q5KGF6              	100.00%		L0PEY0              	100.00%
Bootstrap support for Q5KGF6 as seed ortholog is 99%.
Bootstrap support for L0PEY0 as seed ortholog is 98%.

Group of orthologs #254. Best score 540 bits
Score difference with first non-orthologous sequence - C.neoformans:540 P.jiroveci:540

Q5KH88              	100.00%		L0PGN1              	100.00%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #255. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:539 P.jiroveci:539

Q5KLU5              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #256. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:539 P.jiroveci:539

Q5KFI1              	100.00%		L0PH18              	100.00%
Bootstrap support for Q5KFI1 as seed ortholog is 100%.
Bootstrap support for L0PH18 as seed ortholog is 100%.

Group of orthologs #257. Best score 538 bits
Score difference with first non-orthologous sequence - C.neoformans:538 P.jiroveci:538

Q5KDZ3              	100.00%		L0PBU6              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #258. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 P.jiroveci:537

Q5KFJ7              	100.00%		L0PAL6              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #259. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 P.jiroveci:537

Q5KC94              	100.00%		L0PH33              	100.00%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for L0PH33 as seed ortholog is 100%.

Group of orthologs #260. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 P.jiroveci:537

Q5KPG7              	100.00%		L0PCT5              	100.00%
Bootstrap support for Q5KPG7 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #261. Best score 536 bits
Score difference with first non-orthologous sequence - C.neoformans:422 P.jiroveci:536

Q5KLT1              	100.00%		L0P9I8              	100.00%
Bootstrap support for Q5KLT1 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #262. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:534 P.jiroveci:534

P0CP22              	100.00%		L0PDQ3              	100.00%
Bootstrap support for P0CP22 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #263. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.jiroveci:532

Q5KE94              	100.00%		L0P8N1              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #264. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:532 P.jiroveci:532

Q5KAC2              	100.00%		L0PF08              	100.00%
Bootstrap support for Q5KAC2 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #265. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 P.jiroveci:530

Q5KED7              	100.00%		L0PBY2              	100.00%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #266. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 P.jiroveci:529

Q5KB90              	100.00%		L0P7L8              	100.00%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for L0P7L8 as seed ortholog is 100%.

Group of orthologs #267. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 P.jiroveci:529

Q5KGI0              	100.00%		L0PBV4              	100.00%
Bootstrap support for Q5KGI0 as seed ortholog is 100%.
Bootstrap support for L0PBV4 as seed ortholog is 100%.

Group of orthologs #268. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:452 P.jiroveci:441

Q5KGF2              	100.00%		L0PGB9              	100.00%
Bootstrap support for Q5KGF2 as seed ortholog is 100%.
Bootstrap support for L0PGB9 as seed ortholog is 100%.

Group of orthologs #269. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:443 P.jiroveci:529

Q5KFV6              	100.00%		L0PI36              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #270. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 P.jiroveci:529

Q5KP89              	100.00%		L0PBM5              	100.00%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #271. Best score 527 bits
Score difference with first non-orthologous sequence - C.neoformans:527 P.jiroveci:527

Q5KAB8              	100.00%		L0PER3              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #272. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:525 P.jiroveci:381

Q5KMR8              	100.00%		L0PGD0              	100.00%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for L0PGD0 as seed ortholog is 100%.

Group of orthologs #273. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.jiroveci:524

Q5KNT3              	100.00%		L0PH29              	100.00%
Bootstrap support for Q5KNT3 as seed ortholog is 100%.
Bootstrap support for L0PH29 as seed ortholog is 100%.

Group of orthologs #274. Best score 522 bits
Score difference with first non-orthologous sequence - C.neoformans:522 P.jiroveci:522

Q5KFZ4              	100.00%		L0PH85              	100.00%
Bootstrap support for Q5KFZ4 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #275. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.jiroveci:368

P0CQ70              	100.00%		L0P7V6              	100.00%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 100%.

Group of orthologs #276. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:520 P.jiroveci:520

Q5KH38              	100.00%		L0PEL0              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #277. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:517

Q5KHJ1              	100.00%		L0P7R1              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 99%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #278. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:516 P.jiroveci:516

Q5KBH1              	100.00%		L0PBV8              	100.00%
Bootstrap support for Q5KBH1 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #279. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 P.jiroveci:515

Q5KDP3              	100.00%		L0PG48              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #280. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 P.jiroveci:515

Q5KHV9              	100.00%		L0PHE4              	100.00%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for L0PHE4 as seed ortholog is 100%.

Group of orthologs #281. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 P.jiroveci:514

Q5KAU9              	100.00%		L0P8R6              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #282. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 P.jiroveci:514

Q5KM82              	100.00%		L0PAR8              	100.00%
Bootstrap support for Q5KM82 as seed ortholog is 100%.
Bootstrap support for L0PAR8 as seed ortholog is 100%.

Group of orthologs #283. Best score 513 bits
Score difference with first non-orthologous sequence - C.neoformans:513 P.jiroveci:513

Q5KHB5              	100.00%		L0P702              	100.00%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #284. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 P.jiroveci:512

Q5KEG3              	100.00%		L0PC90              	100.00%
Bootstrap support for Q5KEG3 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #285. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 P.jiroveci:512

Q5KMC0              	100.00%		L0P921              	100.00%
Bootstrap support for Q5KMC0 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #286. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 P.jiroveci:510

Q5KGN3              	100.00%		L0PBP7              	100.00%
Bootstrap support for Q5KGN3 as seed ortholog is 100%.
Bootstrap support for L0PBP7 as seed ortholog is 100%.

Group of orthologs #287. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 P.jiroveci:510

Q5KII9              	100.00%		L0PET9              	100.00%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #288. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 P.jiroveci:509

Q5KAM4              	100.00%		L0PFP0              	100.00%
Bootstrap support for Q5KAM4 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #289. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 P.jiroveci:509

Q5KPT1              	100.00%		L0P7D2              	100.00%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #290. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 P.jiroveci:355

Q5K9B8              	100.00%		L0P942              	100.00%
                    	       		L0P7J6              	52.75%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #291. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:417 P.jiroveci:508

Q5K722              	100.00%		L0PGH3              	100.00%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #292. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 P.jiroveci:508

Q5KEK9              	100.00%		L0PG55              	100.00%
Bootstrap support for Q5KEK9 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #293. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 P.jiroveci:309

Q5KGH1              	100.00%		L0PFN9              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #294. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 P.jiroveci:507

Q5KKK6              	100.00%		L0PF52              	100.00%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for L0PF52 as seed ortholog is 100%.

Group of orthologs #295. Best score 506 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:506

P0CQ92              	100.00%		L0PEM1              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for L0PEM1 as seed ortholog is 100%.

Group of orthologs #296. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:18 P.jiroveci:349

Q5KHE5              	100.00%		L0P9Z0              	100.00%
Bootstrap support for Q5KHE5 as seed ortholog is 69%.
Alternative seed ortholog is P0CP66 (18 bits away from this cluster)
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #297. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:505 P.jiroveci:505

Q5KLJ0              	100.00%		L0PE41              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #298. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:502 P.jiroveci:502

Q5KGD3              	100.00%		L0P9G7              	100.00%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #299. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.jiroveci:502

Q5KIY3              	100.00%		L0P9R8              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #300. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:354 P.jiroveci:502

Q5KHQ8              	100.00%		L0PCS3              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #301. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 P.jiroveci:501

Q5KBD9              	100.00%		L0PF98              	100.00%
Bootstrap support for Q5KBD9 as seed ortholog is 100%.
Bootstrap support for L0PF98 as seed ortholog is 100%.

Group of orthologs #302. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 P.jiroveci:393

Q5KB93              	100.00%		L0PC38              	100.00%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #303. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 P.jiroveci:500

Q5KMH1              	100.00%		L0PCC5              	100.00%
Bootstrap support for Q5KMH1 as seed ortholog is 100%.
Bootstrap support for L0PCC5 as seed ortholog is 100%.

Group of orthologs #304. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 P.jiroveci:500

Q5KKG6              	100.00%		L0PEE3              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #305. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:499 P.jiroveci:499

Q5KGA7              	100.00%		L0PDZ7              	100.00%
Bootstrap support for Q5KGA7 as seed ortholog is 100%.
Bootstrap support for L0PDZ7 as seed ortholog is 100%.

Group of orthologs #306. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 P.jiroveci:498

Q5KFU0              	100.00%		L0PDC9              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #307. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 P.jiroveci:498

Q5KQ06              	100.00%		L0PAL8              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #308. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:391 P.jiroveci:388

Q5KG30              	100.00%		L0PAL3              	100.00%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #309. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 P.jiroveci:497

Q5KDR1              	100.00%		L0PDM3              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #310. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:324 P.jiroveci:497

Q5KP10              	100.00%		L0PB68              	100.00%
Bootstrap support for Q5KP10 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #311. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:496 P.jiroveci:496

Q5KHR6              	100.00%		L0P6Y2              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #312. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:495 P.jiroveci:495

P0CS48              	100.00%		L0PDG5              	100.00%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #313. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 P.jiroveci:494

Q5K8D2              	100.00%		L0PBG8              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #314. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:137 P.jiroveci:493

Q5K7L9              	100.00%		L0PAW8              	100.00%
Bootstrap support for Q5K7L9 as seed ortholog is 97%.
Bootstrap support for L0PAW8 as seed ortholog is 100%.

Group of orthologs #315. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.jiroveci:492

P0CP02              	100.00%		L0PFY3              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 100%.

Group of orthologs #316. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.jiroveci:132

Q5K7X5              	100.00%		L0P6T3              	100.00%
Q5K826              	30.53%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for L0P6T3 as seed ortholog is 99%.

Group of orthologs #317. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:409 P.jiroveci:490

Q5KHR9              	100.00%		L0PA57              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #318. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.jiroveci:490

Q5KC09              	100.00%		L0PGR0              	100.00%
Bootstrap support for Q5KC09 as seed ortholog is 100%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #319. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:431 P.jiroveci:487

Q5KMW2              	100.00%		L0PEU3              	100.00%
Bootstrap support for Q5KMW2 as seed ortholog is 100%.
Bootstrap support for L0PEU3 as seed ortholog is 100%.

Group of orthologs #320. Best score 486 bits
Score difference with first non-orthologous sequence - C.neoformans:486 P.jiroveci:486

Q5KPW4              	100.00%		L0PGV4              	100.00%
Bootstrap support for Q5KPW4 as seed ortholog is 100%.
Bootstrap support for L0PGV4 as seed ortholog is 100%.

Group of orthologs #321. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 P.jiroveci:484

Q5K9I3              	100.00%		L0P8F8              	100.00%
Bootstrap support for Q5K9I3 as seed ortholog is 100%.
Bootstrap support for L0P8F8 as seed ortholog is 100%.

Group of orthologs #322. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 P.jiroveci:484

Q5K9L0              	100.00%		L0P8Z3              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #323. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:483 P.jiroveci:483

P0CN48              	100.00%		L0PCV8              	100.00%
Bootstrap support for P0CN48 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #324. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:483 P.jiroveci:483

Q5KGM9              	100.00%		L0P9U9              	100.00%
Bootstrap support for Q5KGM9 as seed ortholog is 100%.
Bootstrap support for L0P9U9 as seed ortholog is 100%.

Group of orthologs #325. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.jiroveci:391

Q5KGJ1              	100.00%		L0PAI9              	100.00%
Bootstrap support for Q5KGJ1 as seed ortholog is 100%.
Bootstrap support for L0PAI9 as seed ortholog is 100%.

Group of orthologs #326. Best score 481 bits
Score difference with first non-orthologous sequence - C.neoformans:481 P.jiroveci:481

P0CR56              	100.00%		L0PBE9              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #327. Best score 481 bits
Score difference with first non-orthologous sequence - C.neoformans:481 P.jiroveci:481

P0CQ46              	100.00%		L0PGI4              	100.00%
Bootstrap support for P0CQ46 as seed ortholog is 100%.
Bootstrap support for L0PGI4 as seed ortholog is 100%.

Group of orthologs #328. Best score 481 bits
Score difference with first non-orthologous sequence - C.neoformans:399 P.jiroveci:481

Q5KHS6              	100.00%		L0P8C2              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #329. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 P.jiroveci:480

P0CQ36              	100.00%		L0PDU5              	100.00%
Bootstrap support for P0CQ36 as seed ortholog is 100%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #330. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.jiroveci:480

Q5KN57              	100.00%		L0P8V0              	100.00%
Bootstrap support for Q5KN57 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #331. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.jiroveci:291

Q5KCX1              	100.00%		L0P718              	100.00%
Bootstrap support for Q5KCX1 as seed ortholog is 100%.
Bootstrap support for L0P718 as seed ortholog is 99%.

Group of orthologs #332. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 P.jiroveci:478

Q5KEQ4              	100.00%		L0PFB1              	100.00%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #333. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 P.jiroveci:473

P0CM88              	100.00%		L0PB12              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #334. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:471 P.jiroveci:471

Q5KNC3              	100.00%		L0PDH7              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #335. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:469 P.jiroveci:469

Q5KKT3              	100.00%		L0PGD9              	100.00%
Bootstrap support for Q5KKT3 as seed ortholog is 100%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #336. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:394 P.jiroveci:468

Q5KDT3              	100.00%		L0PB50              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #337. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.jiroveci:466

Q5KCX7              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	77.33%
Bootstrap support for Q5KCX7 as seed ortholog is 96%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.

Group of orthologs #338. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 P.jiroveci:466

Q5KF77              	100.00%		L0P7I5              	100.00%
Bootstrap support for Q5KF77 as seed ortholog is 100%.
Bootstrap support for L0P7I5 as seed ortholog is 100%.

Group of orthologs #339. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:349 P.jiroveci:466

Q5KMF5              	100.00%		L0PA15              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #340. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 P.jiroveci:466

Q5KLR9              	100.00%		L0PCT1              	100.00%
Bootstrap support for Q5KLR9 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #341. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:465 P.jiroveci:465

P0CQ34              	100.00%		L0PFY1              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #342. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.jiroveci:465

Q5K9A0              	100.00%		L0PF23              	100.00%
Bootstrap support for Q5K9A0 as seed ortholog is 99%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #343. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:465 P.jiroveci:465

Q5KL48              	100.00%		L0PGN2              	100.00%
Bootstrap support for Q5KL48 as seed ortholog is 100%.
Bootstrap support for L0PGN2 as seed ortholog is 100%.

Group of orthologs #344. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:464 P.jiroveci:464

Q5K7B5              	100.00%		L0PEE4              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #345. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:464 P.jiroveci:464

Q5KFY6              	100.00%		L0PE81              	100.00%
Bootstrap support for Q5KFY6 as seed ortholog is 100%.
Bootstrap support for L0PE81 as seed ortholog is 100%.

Group of orthologs #346. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:464 P.jiroveci:464

Q5KNU1              	100.00%		L0PE98              	100.00%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #347. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.jiroveci:383

Q5K7W2              	100.00%		L0P9F6              	100.00%
Q5K7W1              	55.00%		
Bootstrap support for Q5K7W2 as seed ortholog is 100%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #348. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:463 P.jiroveci:463

P0CN42              	100.00%		L0PFI9              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #349. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 P.jiroveci:461

Q5KP72              	100.00%		L0PFW2              	100.00%
Bootstrap support for Q5KP72 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 100%.

Group of orthologs #350. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 P.jiroveci:459

Q5KJI8              	100.00%		L0PCY5              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #351. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 P.jiroveci:458

P0CO78              	100.00%		L0P7N5              	100.00%
Bootstrap support for P0CO78 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #352. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:454 P.jiroveci:454

Q5K721              	100.00%		L0P7X9              	100.00%
                    	       		L0PBE2              	79.37%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #353. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.jiroveci:454

Q5K9A8              	100.00%		L0PA63              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 100%.

Group of orthologs #354. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:454 P.jiroveci:454

Q5KCP8              	100.00%		L0PFM4              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #355. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 P.jiroveci:453

P0CN84              	100.00%		L0PI13              	100.00%
Bootstrap support for P0CN84 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #356. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 P.jiroveci:453

Q5KG72              	100.00%		L0PG96              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #357. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.jiroveci:452

Q5KHK4              	100.00%		L0P8X6              	100.00%
Q5KHK7              	52.67%		
Q5KJ60              	21.12%		
Q5KJ75              	19.85%		
Q5K821              	16.54%		
Bootstrap support for Q5KHK4 as seed ortholog is 96%.
Bootstrap support for L0P8X6 as seed ortholog is 100%.

Group of orthologs #358. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 P.jiroveci:452

Q5KAU8              	100.00%		L0PCX1              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #359. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 P.jiroveci:452

Q5KH62              	100.00%		L0P9C9              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #360. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 P.jiroveci:451

Q5KHP6              	100.00%		L0PA90              	100.00%
Bootstrap support for Q5KHP6 as seed ortholog is 100%.
Bootstrap support for L0PA90 as seed ortholog is 100%.

Group of orthologs #361. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.jiroveci:344

Q5KPY0              	100.00%		L0PCN5              	100.00%
                    	       		L0P7B6              	89.59%
Bootstrap support for Q5KPY0 as seed ortholog is 100%.
Bootstrap support for L0PCN5 as seed ortholog is 100%.

Group of orthologs #362. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.jiroveci:449

Q5K9J9              	100.00%		L0PIP5              	100.00%
Bootstrap support for Q5K9J9 as seed ortholog is 100%.
Bootstrap support for L0PIP5 as seed ortholog is 100%.

Group of orthologs #363. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.jiroveci:448

Q5K7E1              	100.00%		L0P962              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #364. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 P.jiroveci:448

Q5KFZ3              	100.00%		L0P9B4              	100.00%
Bootstrap support for Q5KFZ3 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #365. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:445 P.jiroveci:445

Q5KJQ2              	100.00%		L0PFE7              	100.00%
Bootstrap support for Q5KJQ2 as seed ortholog is 100%.
Bootstrap support for L0PFE7 as seed ortholog is 100%.

Group of orthologs #366. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:392 P.jiroveci:441

P0CS36              	100.00%		L0P992              	100.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #367. Best score 439 bits
Score difference with first non-orthologous sequence - C.neoformans:439 P.jiroveci:361

Q5KHY6              	100.00%		L0PB70              	100.00%
Bootstrap support for Q5KHY6 as seed ortholog is 100%.
Bootstrap support for L0PB70 as seed ortholog is 100%.

Group of orthologs #368. Best score 439 bits
Score difference with first non-orthologous sequence - C.neoformans:439 P.jiroveci:439

Q5KPL0              	100.00%		L0P9C4              	100.00%
Bootstrap support for Q5KPL0 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #369. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.jiroveci:438

Q5KDB7              	100.00%		L0PCE9              	100.00%
Bootstrap support for Q5KDB7 as seed ortholog is 100%.
Bootstrap support for L0PCE9 as seed ortholog is 100%.

Group of orthologs #370. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 P.jiroveci:438

Q5KE92              	100.00%		L0PCW8              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #371. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 P.jiroveci:437

Q5KHS2              	100.00%		L0PFS3              	100.00%
Bootstrap support for Q5KHS2 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 100%.

Group of orthologs #372. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 P.jiroveci:436

Q5K7Y1              	100.00%		L0P9K4              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #373. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 P.jiroveci:435

Q5KEY0              	100.00%		L0PB18              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #374. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 P.jiroveci:435

Q5KGV7              	100.00%		L0PCH8              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #375. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 P.jiroveci:433

Q5KHS3              	100.00%		L0PAU1              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #376. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.jiroveci:225

Q5KKV1              	100.00%		L0PAY3              	100.00%
Bootstrap support for Q5KKV1 as seed ortholog is 100%.
Bootstrap support for L0PAY3 as seed ortholog is 100%.

Group of orthologs #377. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.jiroveci:321

P0CR10              	100.00%		L0PC98              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 100%.
Bootstrap support for L0PC98 as seed ortholog is 100%.

Group of orthologs #378. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 P.jiroveci:430

Q5K9B3              	100.00%		L0PEQ2              	100.00%
                    	       		L0P999              	48.29%
Bootstrap support for Q5K9B3 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #379. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 P.jiroveci:429

P0CS70              	100.00%		L0P7L7              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #380. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:264 P.jiroveci:429

Q5KAD7              	100.00%		L0PCQ8              	100.00%
Bootstrap support for Q5KAD7 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #381. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.jiroveci:428

Q5K737              	100.00%		L0PCT6              	100.00%
Bootstrap support for Q5K737 as seed ortholog is 100%.
Bootstrap support for L0PCT6 as seed ortholog is 100%.

Group of orthologs #382. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.jiroveci:428

Q5KGZ9              	100.00%		L0PBM9              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #383. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 P.jiroveci:427

Q5KMH4              	100.00%		L0PG01              	100.00%
                    	       		L0P7J0              	81.28%
Bootstrap support for Q5KMH4 as seed ortholog is 100%.
Bootstrap support for L0PG01 as seed ortholog is 100%.

Group of orthologs #384. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 P.jiroveci:426

Q5KFM9              	100.00%		L0PCD9              	100.00%
Bootstrap support for Q5KFM9 as seed ortholog is 100%.
Bootstrap support for L0PCD9 as seed ortholog is 100%.

Group of orthologs #385. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:319 P.jiroveci:426

Q5KD75              	100.00%		L0PFK8              	100.00%
Bootstrap support for Q5KD75 as seed ortholog is 100%.
Bootstrap support for L0PFK8 as seed ortholog is 100%.

Group of orthologs #386. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.jiroveci:187

Q5KLR7              	100.00%		L0PGJ9              	100.00%
Bootstrap support for Q5KLR7 as seed ortholog is 99%.
Bootstrap support for L0PGJ9 as seed ortholog is 99%.

Group of orthologs #387. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 P.jiroveci:425

Q5KDV3              	100.00%		L0PC82              	100.00%
Q5KJX0              	73.42%		
Bootstrap support for Q5KDV3 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #388. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:360 P.jiroveci:378

P0CS42              	100.00%		L0P7Z7              	100.00%
Bootstrap support for P0CS42 as seed ortholog is 100%.
Bootstrap support for L0P7Z7 as seed ortholog is 100%.

Group of orthologs #389. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.jiroveci:425

Q5KDX5              	100.00%		L0PE19              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #390. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:329 P.jiroveci:425

Q5KLQ5              	100.00%		L0P7P4              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #391. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 P.jiroveci:422

Q5KAU7              	100.00%		L0PG05              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for L0PG05 as seed ortholog is 100%.

Group of orthologs #392. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 P.jiroveci:422

Q5KJ16              	100.00%		L0PB54              	100.00%
Bootstrap support for Q5KJ16 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #393. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:377 P.jiroveci:421

Q5KI73              	100.00%		L0P871              	100.00%
                    	       		L0PAC4              	100.00%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for L0P871 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 100%.

Group of orthologs #394. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.jiroveci:294

P0CQ76              	100.00%		L0PBY8              	100.00%
Bootstrap support for P0CQ76 as seed ortholog is 100%.
Bootstrap support for L0PBY8 as seed ortholog is 100%.

Group of orthologs #395. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 P.jiroveci:420

P0CP20              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	53.39%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #396. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 P.jiroveci:420

P0CO28              	100.00%		L0PA24              	100.00%
Bootstrap support for P0CO28 as seed ortholog is 100%.
Bootstrap support for L0PA24 as seed ortholog is 100%.

Group of orthologs #397. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.jiroveci:419

Q5KCL1              	100.00%		L0PCH0              	100.00%
Bootstrap support for Q5KCL1 as seed ortholog is 99%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #398. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 P.jiroveci:418

Q5KBK6              	100.00%		L0P9Z7              	100.00%
Bootstrap support for Q5KBK6 as seed ortholog is 100%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #399. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 P.jiroveci:418

Q5KIN5              	100.00%		L0PF49              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #400. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:260 P.jiroveci:418

Q5KK83              	100.00%		L0PEP2              	100.00%
Bootstrap support for Q5KK83 as seed ortholog is 100%.
Bootstrap support for L0PEP2 as seed ortholog is 100%.

Group of orthologs #401. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 P.jiroveci:417

Q5KJG7              	100.00%		L0P7R5              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 100%.

Group of orthologs #402. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 P.jiroveci:416

Q5KIJ9              	100.00%		L0P8A6              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #403. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 P.jiroveci:416

Q5KDR6              	100.00%		L0PDP2              	100.00%
Bootstrap support for Q5KDR6 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #404. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 P.jiroveci:416

Q5KL44              	100.00%		L0PB23              	100.00%
Bootstrap support for Q5KL44 as seed ortholog is 100%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #405. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 P.jiroveci:415

Q5KED2              	100.00%		L0PDT7              	100.00%
Bootstrap support for Q5KED2 as seed ortholog is 100%.
Bootstrap support for L0PDT7 as seed ortholog is 100%.

Group of orthologs #406. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.jiroveci:415

Q5KPN7              	100.00%		L0PCN1              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #407. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 P.jiroveci:414

P0CR28              	100.00%		L0PGU0              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #408. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 P.jiroveci:414

Q5KDT4              	100.00%		L0PCW4              	100.00%
Bootstrap support for Q5KDT4 as seed ortholog is 100%.
Bootstrap support for L0PCW4 as seed ortholog is 100%.

Group of orthologs #409. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.jiroveci:413

P0CP58              	100.00%		L0P9I4              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #410. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.jiroveci:413

Q5K8S0              	100.00%		L0PBN3              	100.00%
Bootstrap support for Q5K8S0 as seed ortholog is 100%.
Bootstrap support for L0PBN3 as seed ortholog is 100%.

Group of orthologs #411. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.jiroveci:413

Q5KDI6              	100.00%		L0P9I2              	100.00%
Bootstrap support for Q5KDI6 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #412. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.jiroveci:412

P0CR06              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 99%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #413. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 P.jiroveci:344

Q5KBW0              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	49.58%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #414. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 P.jiroveci:412

Q5KHF9              	100.00%		L0PDC7              	100.00%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #415. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:411 P.jiroveci:128

P0CO20              	100.00%		L0PD82              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 100%.

Group of orthologs #416. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 P.jiroveci:410

P0CP50              	100.00%		L0PF74              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #417. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 P.jiroveci:410

Q5KLF5              	100.00%		L0PBT8              	100.00%
Bootstrap support for Q5KLF5 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #418. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 P.jiroveci:408

Q5KC90              	100.00%		L0PBZ7              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #419. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 P.jiroveci:314

Q5KFU8              	100.00%		L0PCM1              	100.00%
Bootstrap support for Q5KFU8 as seed ortholog is 100%.
Bootstrap support for L0PCM1 as seed ortholog is 100%.

Group of orthologs #420. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 P.jiroveci:408

Q5KG83              	100.00%		L0PFC9              	100.00%
Bootstrap support for Q5KG83 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #421. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.jiroveci:408

Q5KNQ9              	100.00%		L0PG89              	100.00%
Bootstrap support for Q5KNQ9 as seed ortholog is 100%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #422. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:322 P.jiroveci:406

Q5KMP3              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	39.76%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #423. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.jiroveci:351

Q5K756              	100.00%		L0PAW4              	100.00%
Bootstrap support for Q5K756 as seed ortholog is 99%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #424. Best score 405 bits
Score difference with first non-orthologous sequence - C.neoformans:241 P.jiroveci:405

Q5K8I1              	100.00%		L0PDT0              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #425. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.jiroveci:403

Q5K9S7              	100.00%		L0PD17              	100.00%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #426. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.jiroveci:403

Q5KE74              	100.00%		L0PBA9              	100.00%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #427. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.jiroveci:403

Q5KE15              	100.00%		L0PGA8              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #428. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:321 P.jiroveci:403

Q5KIM3              	100.00%		L0PCP3              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #429. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 P.jiroveci:403

Q5KHA6              	100.00%		L0PG82              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #430. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.jiroveci:403

Q5KNA1              	100.00%		L0PEC0              	100.00%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #431. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 P.jiroveci:402

Q5KK35              	100.00%		L0PA13              	100.00%
Bootstrap support for Q5KK35 as seed ortholog is 100%.
Bootstrap support for L0PA13 as seed ortholog is 100%.

Group of orthologs #432. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 P.jiroveci:402

Q5KLL0              	100.00%		L0PFU3              	100.00%
Bootstrap support for Q5KLL0 as seed ortholog is 100%.
Bootstrap support for L0PFU3 as seed ortholog is 100%.

Group of orthologs #433. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.jiroveci:401

Q5K796              	100.00%		L0P891              	100.00%
Bootstrap support for Q5K796 as seed ortholog is 100%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #434. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.jiroveci:399

Q5KLZ4              	100.00%		L0PB24              	100.00%
Bootstrap support for Q5KLZ4 as seed ortholog is 100%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #435. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 P.jiroveci:399

Q5KPH3              	100.00%		L0PAC7              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #436. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 P.jiroveci:398

P0CN28              	100.00%		L0P9U8              	100.00%
Bootstrap support for P0CN28 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #437. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.jiroveci:397

Q5KFW7              	100.00%		L0PGG9              	100.00%
Bootstrap support for Q5KFW7 as seed ortholog is 100%.
Bootstrap support for L0PGG9 as seed ortholog is 100%.

Group of orthologs #438. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:397 P.jiroveci:397

Q5KKQ4              	100.00%		L0PGF5              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #439. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 P.jiroveci:396

P0CP90              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	29.90%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #440. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.jiroveci:97

Q5KDX8              	100.00%		L0P6V9              	100.00%
Bootstrap support for Q5KDX8 as seed ortholog is 94%.
Bootstrap support for L0P6V9 as seed ortholog is 99%.

Group of orthologs #441. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 P.jiroveci:396

Q5KB65              	100.00%		L0PBH6              	100.00%
Bootstrap support for Q5KB65 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #442. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 P.jiroveci:396

Q5KK60              	100.00%		L0PCR1              	100.00%
Bootstrap support for Q5KK60 as seed ortholog is 100%.
Bootstrap support for L0PCR1 as seed ortholog is 100%.

Group of orthologs #443. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 P.jiroveci:394

Q5KAP5              	100.00%		L0PGN8              	100.00%
Bootstrap support for Q5KAP5 as seed ortholog is 100%.
Bootstrap support for L0PGN8 as seed ortholog is 100%.

Group of orthologs #444. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:273 P.jiroveci:394

Q5KKM6              	100.00%		L0PGJ5              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #445. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.jiroveci:317

Q5KKN2              	100.00%		L0PAX8              	100.00%
Bootstrap support for Q5KKN2 as seed ortholog is 100%.
Bootstrap support for L0PAX8 as seed ortholog is 100%.

Group of orthologs #446. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 P.jiroveci:393

Q5KLM5              	100.00%		L0PFD9              	100.00%
Bootstrap support for Q5KLM5 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #447. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 P.jiroveci:392

Q5KCY4              	100.00%		L0PHL5              	100.00%
Bootstrap support for Q5KCY4 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #448. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 P.jiroveci:391

Q5KP39              	100.00%		L0PBC5              	100.00%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #449. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.jiroveci:206

Q5KAZ7              	100.00%		L0PCJ5              	100.00%
Bootstrap support for Q5KAZ7 as seed ortholog is 99%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #450. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 P.jiroveci:389

Q5KIW8              	100.00%		L0PB35              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #451. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 P.jiroveci:389

Q5KJQ1              	100.00%		L0PEY9              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #452. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 P.jiroveci:388

Q5K6X7              	100.00%		L0PC91              	100.00%
Bootstrap support for Q5K6X7 as seed ortholog is 100%.
Bootstrap support for L0PC91 as seed ortholog is 100%.

Group of orthologs #453. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 P.jiroveci:388

P0CS66              	100.00%		L0PDN4              	100.00%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #454. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 P.jiroveci:388

Q5KDW3              	100.00%		L0P8N0              	100.00%
Bootstrap support for Q5KDW3 as seed ortholog is 100%.
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #455. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 P.jiroveci:388

Q5KH10              	100.00%		L0PED5              	100.00%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #456. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 P.jiroveci:387

P0CO44              	100.00%		L0PDL6              	100.00%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #457. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 P.jiroveci:384

P0CN64              	100.00%		L0PAB3              	100.00%
Bootstrap support for P0CN64 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #458. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:160 P.jiroveci:384

Q5KG79              	100.00%		L0P9Y8              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 99%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #459. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.jiroveci:135

Q5KP65              	100.00%		L0PA26              	100.00%
Bootstrap support for Q5KP65 as seed ortholog is 99%.
Bootstrap support for L0PA26 as seed ortholog is 99%.

Group of orthologs #460. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.jiroveci:381

P0CM24              	100.00%		L0PB28              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #461. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.jiroveci:381

Q5KBN7              	100.00%		L0PD41              	100.00%
Bootstrap support for Q5KBN7 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #462. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.jiroveci:381

Q5KKS5              	100.00%		L0PAU5              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #463. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 P.jiroveci:381

Q5KIA2              	100.00%		L0PFR1              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for L0PFR1 as seed ortholog is 100%.

Group of orthologs #464. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 P.jiroveci:379

Q5KAH0              	100.00%		L0P8B2              	100.00%
Bootstrap support for Q5KAH0 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #465. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.jiroveci:379

Q5KKX9              	100.00%		L0PHI3              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #466. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.jiroveci:378

P0CM44              	100.00%		L0PGR5              	100.00%
Bootstrap support for P0CM44 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #467. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:328 P.jiroveci:321

Q5K7V7              	100.00%		L0PFE0              	100.00%
Bootstrap support for Q5K7V7 as seed ortholog is 100%.
Bootstrap support for L0PFE0 as seed ortholog is 100%.

Group of orthologs #468. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 P.jiroveci:377

Q5K7N9              	100.00%		L0PFP2              	100.00%
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #469. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:312 P.jiroveci:377

Q5KHL0              	100.00%		L0PCT4              	100.00%
Bootstrap support for Q5KHL0 as seed ortholog is 100%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #470. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 P.jiroveci:377

Q5KIU7              	100.00%		L0PET6              	100.00%
Bootstrap support for Q5KIU7 as seed ortholog is 100%.
Bootstrap support for L0PET6 as seed ortholog is 100%.

Group of orthologs #471. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.jiroveci:376

Q5K8Z2              	100.00%		L0PAL9              	100.00%
                    	       		L0PBY7              	39.43%
Bootstrap support for Q5K8Z2 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #472. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.jiroveci:376

Q5KA97              	100.00%		L0P9J7              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #473. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.jiroveci:376

Q5K7Q6              	100.00%		L0PEF3              	100.00%
Bootstrap support for Q5K7Q6 as seed ortholog is 100%.
Bootstrap support for L0PEF3 as seed ortholog is 100%.

Group of orthologs #474. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.jiroveci:376

Q5KJU2              	100.00%		L0PA42              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #475. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.jiroveci:376

Q5KI46              	100.00%		L0PET5              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for L0PET5 as seed ortholog is 100%.

Group of orthologs #476. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 P.jiroveci:376

Q5KQ95              	100.00%		L0PA88              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #477. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.jiroveci:375

Q5KA00              	100.00%		L0PFQ8              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #478. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 P.jiroveci:375

Q5KIX0              	100.00%		L0PAC0              	100.00%
Bootstrap support for Q5KIX0 as seed ortholog is 100%.
Bootstrap support for L0PAC0 as seed ortholog is 100%.

Group of orthologs #479. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.jiroveci:374

P0CQ66              	100.00%		L0PDK4              	100.00%
Bootstrap support for P0CQ66 as seed ortholog is 100%.
Bootstrap support for L0PDK4 as seed ortholog is 100%.

Group of orthologs #480. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.jiroveci:374

Q5KQ94              	100.00%		L0P861              	100.00%
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #481. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 P.jiroveci:373

Q5KKN5              	100.00%		L0PE21              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #482. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 P.jiroveci:373

Q5KLS1              	100.00%		L0PGC4              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #483. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.jiroveci:372

Q5KAX2              	100.00%		L0PFJ7              	100.00%
Bootstrap support for Q5KAX2 as seed ortholog is 93%.
Bootstrap support for L0PFJ7 as seed ortholog is 100%.

Group of orthologs #484. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 P.jiroveci:371

Q5K8Z3              	100.00%		L0PID0              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #485. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 P.jiroveci:371

Q5KL14              	100.00%		L0P9B8              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #486. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.jiroveci:369

Q5KJJ1              	100.00%		L0P7T8              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #487. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 P.jiroveci:181

Q5KPZ0              	100.00%		L0P9F3              	100.00%
Bootstrap support for Q5KPZ0 as seed ortholog is 100%.
Bootstrap support for L0P9F3 as seed ortholog is 99%.

Group of orthologs #488. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.jiroveci:295

Q5K9D3              	100.00%		L0P8W4              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #489. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.jiroveci:368

Q5KFQ5              	100.00%		L0PAP4              	100.00%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #490. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 P.jiroveci:368

Q5KQ18              	100.00%		L0PD03              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #491. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 P.jiroveci:367

Q5KCY3              	100.00%		L0PEJ1              	100.00%
Bootstrap support for Q5KCY3 as seed ortholog is 100%.
Bootstrap support for L0PEJ1 as seed ortholog is 100%.

Group of orthologs #492. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 P.jiroveci:367

Q5KML3              	100.00%		L0PDV0              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #493. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.jiroveci:366

P0CM58              	100.00%		L0PCL6              	100.00%
Bootstrap support for P0CM58 as seed ortholog is 100%.
Bootstrap support for L0PCL6 as seed ortholog is 100%.

Group of orthologs #494. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.jiroveci:366

Q5KGG9              	100.00%		L0PBD0              	100.00%
Bootstrap support for Q5KGG9 as seed ortholog is 100%.
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #495. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 P.jiroveci:366

Q5KHS1              	100.00%		L0PCB2              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #496. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 P.jiroveci:238

Q5KK28              	100.00%		L0PEW1              	100.00%
Bootstrap support for Q5KK28 as seed ortholog is 100%.
Bootstrap support for L0PEW1 as seed ortholog is 99%.

Group of orthologs #497. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.jiroveci:364

P0CR74              	100.00%		L0PAF9              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #498. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 P.jiroveci:364

Q5KMU2              	100.00%		L0PBD2              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #499. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 P.jiroveci:363

Q5KAX6              	100.00%		L0P8G8              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #500. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 P.jiroveci:363

Q5KNJ8              	100.00%		L0PDY1              	100.00%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #501. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.jiroveci:152

Q5K6Z2              	100.00%		L0PF10              	100.00%
Bootstrap support for Q5K6Z2 as seed ortholog is 100%.
Bootstrap support for L0PF10 as seed ortholog is 100%.

Group of orthologs #502. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.jiroveci:217

Q5KMN8              	100.00%		L0PBP2              	100.00%
Bootstrap support for Q5KMN8 as seed ortholog is 57%.
Alternative seed ortholog is Q5KHC6 (5 bits away from this cluster)
Bootstrap support for L0PBP2 as seed ortholog is 99%.

Group of orthologs #503. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.jiroveci:359

P0CP54              	100.00%		L0PDH8              	100.00%
Bootstrap support for P0CP54 as seed ortholog is 99%.
Bootstrap support for L0PDH8 as seed ortholog is 100%.

Group of orthologs #504. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.jiroveci:359

Q5KD68              	100.00%		L0P963              	100.00%
Bootstrap support for Q5KD68 as seed ortholog is 100%.
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #505. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.jiroveci:359

P0CP88              	100.00%		L0PFP6              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #506. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.jiroveci:359

Q5KHZ2              	100.00%		L0PBQ9              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #507. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.jiroveci:359

Q5KHK1              	100.00%		L0PF30              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #508. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.jiroveci:358

Q5KGD8              	100.00%		L0PAA3              	100.00%
Bootstrap support for Q5KGD8 as seed ortholog is 100%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #509. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.jiroveci:357

Q5KJ82              	100.00%		L0P6U6              	100.00%
Bootstrap support for Q5KJ82 as seed ortholog is 100%.
Bootstrap support for L0P6U6 as seed ortholog is 100%.

Group of orthologs #510. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 P.jiroveci:357

Q5KC51              	100.00%		L0PFI2              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #511. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 P.jiroveci:357

Q5KKJ5              	100.00%		L0PBA8              	100.00%
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #512. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.jiroveci:356

Q5KBJ5              	100.00%		L0PA92              	100.00%
Q5KBJ2              	21.30%		L0P8X8              	28.37%
Bootstrap support for Q5KBJ5 as seed ortholog is 99%.
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #513. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 P.jiroveci:356

Q5KJZ6              	100.00%		L0PFK7              	100.00%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #514. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 P.jiroveci:354

Q5KF87              	100.00%		L0PHL3              	100.00%
Bootstrap support for Q5KF87 as seed ortholog is 100%.
Bootstrap support for L0PHL3 as seed ortholog is 100%.

Group of orthologs #515. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:283 P.jiroveci:354

Q5KJV1              	100.00%		L0PFT9              	100.00%
Bootstrap support for Q5KJV1 as seed ortholog is 100%.
Bootstrap support for L0PFT9 as seed ortholog is 100%.

Group of orthologs #516. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 P.jiroveci:354

Q5KN85              	100.00%		L0PFG1              	100.00%
Bootstrap support for Q5KN85 as seed ortholog is 100%.
Bootstrap support for L0PFG1 as seed ortholog is 100%.

Group of orthologs #517. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.jiroveci:353

Q5K7J8              	100.00%		L0PCF4              	100.00%
                    	       		L0P926              	51.65%
Bootstrap support for Q5K7J8 as seed ortholog is 99%.
Bootstrap support for L0PCF4 as seed ortholog is 100%.

Group of orthologs #518. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.jiroveci:353

Q5KK90              	100.00%		L0P9X7              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #519. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 P.jiroveci:353

Q5KI91              	100.00%		L0PEB2              	100.00%
Bootstrap support for Q5KI91 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #520. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.jiroveci:352

P0CP26              	100.00%		L0PBB7              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for L0PBB7 as seed ortholog is 100%.

Group of orthologs #521. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.jiroveci:352

Q5K7P2              	100.00%		L0PCL9              	100.00%
Bootstrap support for Q5K7P2 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #522. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 P.jiroveci:352

Q5KB64              	100.00%		L0PCY9              	100.00%
Bootstrap support for Q5KB64 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #523. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:288 P.jiroveci:352

Q5KL88              	100.00%		L0PGH8              	100.00%
Bootstrap support for Q5KL88 as seed ortholog is 100%.
Bootstrap support for L0PGH8 as seed ortholog is 100%.

Group of orthologs #524. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 P.jiroveci:351

Q5KIS9              	100.00%		L0P7S7              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #525. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.jiroveci:202

Q5K7U5              	100.00%		L0P7S4              	100.00%
Bootstrap support for Q5K7U5 as seed ortholog is 96%.
Bootstrap support for L0P7S4 as seed ortholog is 100%.

Group of orthologs #526. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.jiroveci:349

P0CQ14              	100.00%		L0PIR9              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #527. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 P.jiroveci:349

Q5KMQ9              	100.00%		L0P8K2              	100.00%
Bootstrap support for Q5KMQ9 as seed ortholog is 100%.
Bootstrap support for L0P8K2 as seed ortholog is 100%.

Group of orthologs #528. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.jiroveci:348

P0CS46              	100.00%		L0PGE3              	100.00%
                    	       		L0PEY7              	39.77%
Bootstrap support for P0CS46 as seed ortholog is 100%.
Bootstrap support for L0PGE3 as seed ortholog is 100%.

Group of orthologs #529. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.jiroveci:348

Q5KDP4              	100.00%		L0PF71              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #530. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 P.jiroveci:348

Q5KHY1              	100.00%		L0PCY0              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #531. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 P.jiroveci:346

P0CS60              	100.00%		L0PA00              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #532. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.jiroveci:274

P0CR02              	100.00%		L0PAY5              	100.00%
Bootstrap support for P0CR02 as seed ortholog is 85%.
Bootstrap support for L0PAY5 as seed ortholog is 100%.

Group of orthologs #533. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 P.jiroveci:346

Q5K772              	100.00%		L0PAN7              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #534. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.jiroveci:346

Q5KJV0              	100.00%		L0PA09              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 99%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #535. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 P.jiroveci:346

Q5KJE3              	100.00%		L0PEA7              	100.00%
Bootstrap support for Q5KJE3 as seed ortholog is 100%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #536. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:296 P.jiroveci:344

P0CS32              	100.00%		L0PAL2              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #537. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:288 P.jiroveci:344

Q5KGN7              	100.00%		L0PEF5              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #538. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 P.jiroveci:343

Q5KNK2              	100.00%		L0PCG4              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #539. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 P.jiroveci:342

Q5KF31              	100.00%		L0PA14              	100.00%
Bootstrap support for Q5KF31 as seed ortholog is 100%.
Bootstrap support for L0PA14 as seed ortholog is 100%.

Group of orthologs #540. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.jiroveci:342

Q5KMP4              	100.00%		L0PAZ6              	100.00%
Bootstrap support for Q5KMP4 as seed ortholog is 99%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #541. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.jiroveci:341

P0CS28              	100.00%		L0P848              	100.00%
                    	       		L0P867              	86.57%
Bootstrap support for P0CS28 as seed ortholog is 100%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #542. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.jiroveci:341

P0CP30              	100.00%		L0P870              	100.00%
Bootstrap support for P0CP30 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #543. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.jiroveci:341

Q5KA05              	100.00%		L0PGV5              	100.00%
Bootstrap support for Q5KA05 as seed ortholog is 100%.
Bootstrap support for L0PGV5 as seed ortholog is 100%.

Group of orthologs #544. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 P.jiroveci:341

Q5KJ58              	100.00%		L0PB00              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for L0PB00 as seed ortholog is 100%.

Group of orthologs #545. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 P.jiroveci:340

Q5KG39              	100.00%		L0PDJ4              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for L0PDJ4 as seed ortholog is 100%.

Group of orthologs #546. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 P.jiroveci:340

Q5KF16              	100.00%		L0PFE1              	100.00%
Bootstrap support for Q5KF16 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #547. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 P.jiroveci:340

Q5KKT0              	100.00%		L0PBN2              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #548. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.jiroveci:340

Q5KIT1              	100.00%		L0PFA3              	100.00%
Bootstrap support for Q5KIT1 as seed ortholog is 98%.
Bootstrap support for L0PFA3 as seed ortholog is 100%.

Group of orthologs #549. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 P.jiroveci:339

Q5KM39              	100.00%		L0P7E2              	100.00%
Bootstrap support for Q5KM39 as seed ortholog is 100%.
Bootstrap support for L0P7E2 as seed ortholog is 100%.

Group of orthologs #550. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 P.jiroveci:339

Q5KLM3              	100.00%		L0PAW1              	100.00%
Bootstrap support for Q5KLM3 as seed ortholog is 100%.
Bootstrap support for L0PAW1 as seed ortholog is 100%.

Group of orthologs #551. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 P.jiroveci:339

Q5KMA6              	100.00%		L0PAG0              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #552. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 P.jiroveci:339

Q5KK62              	100.00%		L0PG08              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #553. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.jiroveci:134

Q5KCA0              	100.00%		L0PCJ3              	100.00%
Bootstrap support for Q5KCA0 as seed ortholog is 100%.
Bootstrap support for L0PCJ3 as seed ortholog is 99%.

Group of orthologs #554. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.jiroveci:259

P0CR08              	100.00%		L0P966              	100.00%
Bootstrap support for P0CR08 as seed ortholog is 99%.
Bootstrap support for L0P966 as seed ortholog is 100%.

Group of orthologs #555. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.jiroveci:336

Q5KAT0              	100.00%		L0PD75              	100.00%
Bootstrap support for Q5KAT0 as seed ortholog is 100%.
Bootstrap support for L0PD75 as seed ortholog is 100%.

Group of orthologs #556. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.jiroveci:336

Q5KN69              	100.00%		L0PBH8              	100.00%
Bootstrap support for Q5KN69 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #557. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 P.jiroveci:336

Q5KK40              	100.00%		L0PF83              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #558. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 P.jiroveci:334

Q5KKR2              	100.00%		L0PCI0              	100.00%
Bootstrap support for Q5KKR2 as seed ortholog is 100%.
Bootstrap support for L0PCI0 as seed ortholog is 100%.

Group of orthologs #559. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 P.jiroveci:334

Q5KQ20              	100.00%		L0PBI2              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #560. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 P.jiroveci:333

Q5KCK3              	100.00%		L0PCX5              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #561. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 P.jiroveci:333

Q5K8P5              	100.00%		L0PIV4              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #562. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.jiroveci:332

Q5K9N3              	100.00%		L0PF97              	100.00%
Bootstrap support for Q5K9N3 as seed ortholog is 100%.
Bootstrap support for L0PF97 as seed ortholog is 100%.

Group of orthologs #563. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 P.jiroveci:332

Q5KJY4              	100.00%		L0P9P0              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #564. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 P.jiroveci:331

Q5K6V3              	100.00%		L0PB10              	100.00%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for L0PB10 as seed ortholog is 100%.

Group of orthologs #565. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.jiroveci:148

P0CQ02              	100.00%		L0PD43              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 99%.

Group of orthologs #566. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 P.jiroveci:331

Q5K8K4              	100.00%		L0PBX2              	100.00%
Bootstrap support for Q5K8K4 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #567. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.jiroveci:331

Q5KDX3              	100.00%		L0PAD9              	100.00%
Bootstrap support for Q5KDX3 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #568. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.jiroveci:237

P0CQ90              	100.00%		L0PBM6              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for L0PBM6 as seed ortholog is 100%.

Group of orthologs #569. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 P.jiroveci:330

Q5KEA3              	100.00%		L0PES3              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #570. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:260 P.jiroveci:330

Q5KG91              	100.00%		L0PFZ1              	100.00%
Bootstrap support for Q5KG91 as seed ortholog is 100%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #571. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 P.jiroveci:329

Q5K6U9              	100.00%		L0P880              	100.00%
Bootstrap support for Q5K6U9 as seed ortholog is 100%.
Bootstrap support for L0P880 as seed ortholog is 100%.

Group of orthologs #572. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:6 P.jiroveci:197

Q5KQ80              	100.00%		L0PH03              	100.00%
Bootstrap support for Q5KQ80 as seed ortholog is 47%.
Alternative seed ortholog is Q5KM52 (6 bits away from this cluster)
Bootstrap support for L0PH03 as seed ortholog is 100%.

Group of orthologs #573. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.jiroveci:326

Q5K761              	100.00%		L0PE74              	100.00%
Bootstrap support for Q5K761 as seed ortholog is 99%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #574. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.jiroveci:326

Q5KH75              	100.00%		L0PBY3              	100.00%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #575. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.jiroveci:326

Q5KFC1              	100.00%		L0PG34              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 100%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #576. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.jiroveci:326

Q5KEZ5              	100.00%		L0PH80              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #577. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 P.jiroveci:326

Q5KJZ3              	100.00%		L0PEG1              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 100%.

Group of orthologs #578. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.jiroveci:325

Q5KNI6              	100.00%		L0PCG0              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #579. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 P.jiroveci:325

Q5KK78              	100.00%		L0PFX9              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #580. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 P.jiroveci:324

Q5K952              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	84.97%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #581. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 P.jiroveci:324

Q5KHI3              	100.00%		L0PAI0              	100.00%
Bootstrap support for Q5KHI3 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #582. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 P.jiroveci:279

Q5KI80              	100.00%		L0PC30              	100.00%
Bootstrap support for Q5KI80 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #583. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.jiroveci:324

Q5KEK1              	100.00%		L0PGS3              	100.00%
Bootstrap support for Q5KEK1 as seed ortholog is 98%.
Bootstrap support for L0PGS3 as seed ortholog is 100%.

Group of orthologs #584. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 P.jiroveci:322

Q5K8Z6              	100.00%		L0P9S5              	100.00%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #585. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.jiroveci:225

Q5KIG3              	100.00%		L0P9Y3              	100.00%
Bootstrap support for Q5KIG3 as seed ortholog is 100%.
Bootstrap support for L0P9Y3 as seed ortholog is 100%.

Group of orthologs #586. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.jiroveci:130

Q5KC86              	100.00%		L0P6X2              	100.00%
Q5KFY4              	9.59%		
Bootstrap support for Q5KC86 as seed ortholog is 96%.
Bootstrap support for L0P6X2 as seed ortholog is 100%.

Group of orthologs #587. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.jiroveci:320

P0CN50              	100.00%		L0P8R5              	100.00%
Bootstrap support for P0CN50 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #588. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.jiroveci:320

P0CS38              	100.00%		L0PCU5              	100.00%
Bootstrap support for P0CS38 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #589. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.jiroveci:320

Q5KCA4              	100.00%		L0P8R8              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #590. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.jiroveci:320

Q5KFZ1              	100.00%		L0PGL6              	100.00%
Bootstrap support for Q5KFZ1 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #591. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 P.jiroveci:264

Q5KM94              	100.00%		L0PD68              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #592. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 P.jiroveci:319

Q5KAB2              	100.00%		L0P9Z4              	100.00%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #593. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 P.jiroveci:319

Q5KIP3              	100.00%		L0PBP4              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #594. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.jiroveci:318

P0CS12              	100.00%		L0PA65              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #595. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.jiroveci:318

Q5K7W7              	100.00%		L0PEX7              	100.00%
Bootstrap support for Q5K7W7 as seed ortholog is 100%.
Bootstrap support for L0PEX7 as seed ortholog is 100%.

Group of orthologs #596. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 P.jiroveci:318

Q5KG73              	100.00%		L0P863              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 100%.
Bootstrap support for L0P863 as seed ortholog is 100%.

Group of orthologs #597. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.jiroveci:317

Q5K864              	100.00%		L0P7V8              	100.00%
Bootstrap support for Q5K864 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #598. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.jiroveci:317

Q5KJN4              	100.00%		L0PBK1              	100.00%
Bootstrap support for Q5KJN4 as seed ortholog is 100%.
Bootstrap support for L0PBK1 as seed ortholog is 100%.

Group of orthologs #599. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.jiroveci:253

Q5KKP1              	100.00%		L0PB47              	100.00%
Bootstrap support for Q5KKP1 as seed ortholog is 98%.
Bootstrap support for L0PB47 as seed ortholog is 100%.

Group of orthologs #600. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.jiroveci:317

Q5KMX1              	100.00%		L0PE04              	100.00%
Bootstrap support for Q5KMX1 as seed ortholog is 100%.
Bootstrap support for L0PE04 as seed ortholog is 100%.

Group of orthologs #601. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 P.jiroveci:317

Q5KK04              	100.00%		L0PH96              	100.00%
Bootstrap support for Q5KK04 as seed ortholog is 100%.
Bootstrap support for L0PH96 as seed ortholog is 100%.

Group of orthologs #602. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 P.jiroveci:316

Q5KMY7              	100.00%		L0PHG9              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #603. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.jiroveci:315

Q5K7E0              	100.00%		L0PA60              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for L0PA60 as seed ortholog is 100%.

Group of orthologs #604. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 P.jiroveci:315

Q5K9I2              	100.00%		L0PBI8              	100.00%
Bootstrap support for Q5K9I2 as seed ortholog is 100%.
Bootstrap support for L0PBI8 as seed ortholog is 100%.

Group of orthologs #605. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.jiroveci:314

Q5KK71              	100.00%		L0P7Z1              	100.00%
Bootstrap support for Q5KK71 as seed ortholog is 100%.
Bootstrap support for L0P7Z1 as seed ortholog is 100%.

Group of orthologs #606. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.jiroveci:314

Q5KH76              	100.00%		L0PD99              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #607. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.jiroveci:314

Q5KI18              	100.00%		L0PHH2              	100.00%
Bootstrap support for Q5KI18 as seed ortholog is 100%.
Bootstrap support for L0PHH2 as seed ortholog is 100%.

Group of orthologs #608. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 P.jiroveci:313

Q5K8T0              	100.00%		L0PHJ3              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #609. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:162 P.jiroveci:313

Q5KA78              	100.00%		L0PGG0              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 99%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #610. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.jiroveci:312

P0CP92              	100.00%		L0P865              	100.00%
Bootstrap support for P0CP92 as seed ortholog is 100%.
Bootstrap support for L0P865 as seed ortholog is 100%.

Group of orthologs #611. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.jiroveci:312

Q5KNY9              	100.00%		L0P913              	100.00%
Bootstrap support for Q5KNY9 as seed ortholog is 100%.
Bootstrap support for L0P913 as seed ortholog is 100%.

Group of orthologs #612. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.jiroveci:312

Q5KKF0              	100.00%		L0PGL1              	100.00%
Bootstrap support for Q5KKF0 as seed ortholog is 99%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #613. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 P.jiroveci:311

Q5KHT1              	100.00%		L0P6P2              	100.00%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #614. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.jiroveci:310

Q5K7S4              	100.00%		L0PCH6              	100.00%
Bootstrap support for Q5K7S4 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #615. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.jiroveci:310

Q5KFM4              	100.00%		L0PBS9              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for L0PBS9 as seed ortholog is 100%.

Group of orthologs #616. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.jiroveci:310

Q5KEJ6              	100.00%		L0PHG7              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #617. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.jiroveci:309

Q5KIJ7              	100.00%		L0P912              	100.00%
                    	       		L0P908              	89.55%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #618. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:259

Q5K9V2              	100.00%		L0P8I7              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #619. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 P.jiroveci:307

Q5KPZ1              	100.00%		L0P9X4              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #620. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:254 P.jiroveci:306

Q5KKC2              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	81.20%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #621. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.jiroveci:306

Q5KPZ5              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	40.97%
Bootstrap support for Q5KPZ5 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #622. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.jiroveci:306

Q5KCK7              	100.00%		L0PFS8              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #623. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.jiroveci:306

Q5KMV4              	100.00%		L0P9N8              	100.00%
Bootstrap support for Q5KMV4 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 100%.

Group of orthologs #624. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 P.jiroveci:306

Q5KJJ3              	100.00%		L0PF46              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #625. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.jiroveci:305

Q5KBQ7              	100.00%		L0PAG1              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #626. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.jiroveci:305

Q5KFH8              	100.00%		L0PCI3              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #627. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.jiroveci:305

Q5KJ04              	100.00%		L0PAP3              	100.00%
Bootstrap support for Q5KJ04 as seed ortholog is 100%.
Bootstrap support for L0PAP3 as seed ortholog is 100%.

Group of orthologs #628. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 P.jiroveci:305

Q5KI89              	100.00%		L0PFZ0              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #629. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 P.jiroveci:304

Q5KAW7              	100.00%		L0PF92              	100.00%
Bootstrap support for Q5KAW7 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #630. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 P.jiroveci:304

Q5KN58              	100.00%		L0PDI2              	100.00%
Bootstrap support for Q5KN58 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #631. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 P.jiroveci:303

Q5KAQ3              	100.00%		L0PGF9              	100.00%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for L0PGF9 as seed ortholog is 100%.

Group of orthologs #632. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:107 P.jiroveci:302

Q5KLW0              	100.00%		L0P983              	100.00%
Bootstrap support for Q5KLW0 as seed ortholog is 99%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #633. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 P.jiroveci:302

Q5KNB0              	100.00%		L0PI19              	100.00%
Bootstrap support for Q5KNB0 as seed ortholog is 100%.
Bootstrap support for L0PI19 as seed ortholog is 100%.

Group of orthologs #634. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 P.jiroveci:301

Q5K9Y2              	100.00%		L0PC62              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #635. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.jiroveci:300

Q5KER6              	100.00%		L0P9Q3              	100.00%
Bootstrap support for Q5KER6 as seed ortholog is 100%.
Bootstrap support for L0P9Q3 as seed ortholog is 100%.

Group of orthologs #636. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.jiroveci:300

Q5KF34              	100.00%		L0PEY5              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for L0PEY5 as seed ortholog is 100%.

Group of orthologs #637. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.jiroveci:300

Q5KKH6              	100.00%		L0PCC1              	100.00%
Bootstrap support for Q5KKH6 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #638. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 P.jiroveci:300

Q5KP99              	100.00%		L0PEY2              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #639. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 P.jiroveci:256

Q5KDC2              	100.00%		L0PEM3              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 100%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #640. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.jiroveci:298

P0CN18              	100.00%		L0PDW0              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 99%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #641. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.jiroveci:298

Q5K6Y3              	100.00%		L0PD18              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #642. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 P.jiroveci:298

Q5KPK4              	100.00%		L0PAJ2              	100.00%
Bootstrap support for Q5KPK4 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #643. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 P.jiroveci:297

Q5KMR3              	100.00%		L0P9S7              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #644. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 P.jiroveci:297

Q5KQ04              	100.00%		L0P8J2              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #645. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.jiroveci:296

Q5KFD9              	100.00%		L0PCJ2              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #646. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.jiroveci:250

P0CM04              	100.00%		L0PAM8              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 100%.
Bootstrap support for L0PAM8 as seed ortholog is 100%.

Group of orthologs #647. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.jiroveci:295

Q5KAE4              	100.00%		L0PBT0              	100.00%
Bootstrap support for Q5KAE4 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #648. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.jiroveci:295

Q5KAS7              	100.00%		L0PEV9              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #649. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.jiroveci:295

Q5KIV1              	100.00%		L0PB03              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 100%.

Group of orthologs #650. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 P.jiroveci:295

Q5KPB3              	100.00%		L0PBL3              	100.00%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #651. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.jiroveci:221

Q5KJK3              	100.00%		L0PG24              	100.00%
Bootstrap support for Q5KJK3 as seed ortholog is 99%.
Bootstrap support for L0PG24 as seed ortholog is 99%.

Group of orthologs #652. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 P.jiroveci:294

P0CO42              	100.00%		L0PEX1              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 100%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #653. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.jiroveci:294

Q5KAL7              	100.00%		L0PHN0              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #654. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.jiroveci:230

Q5K8A5              	100.00%		L0PB61              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #655. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.jiroveci:144

Q5K880              	100.00%		L0PC59              	100.00%
Bootstrap support for Q5K880 as seed ortholog is 100%.
Bootstrap support for L0PC59 as seed ortholog is 100%.

Group of orthologs #656. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.jiroveci:292

Q5K9R5              	100.00%		L0PDV1              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #657. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.jiroveci:292

Q5KF23              	100.00%		L0PBA4              	100.00%
Bootstrap support for Q5KF23 as seed ortholog is 100%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #658. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 P.jiroveci:292

Q5KH85              	100.00%		L0PB82              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for L0PB82 as seed ortholog is 100%.

Group of orthologs #659. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 P.jiroveci:291

Q5K947              	100.00%		L0PFI8              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #660. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:150 P.jiroveci:162

Q5KKS0              	100.00%		L0PG51              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 99%.
Bootstrap support for L0PG51 as seed ortholog is 99%.

Group of orthologs #661. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.jiroveci:290

Q5K7I8              	100.00%		L0P7W4              	100.00%
Bootstrap support for Q5K7I8 as seed ortholog is 100%.
Bootstrap support for L0P7W4 as seed ortholog is 100%.

Group of orthologs #662. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.jiroveci:290

Q5KKY7              	100.00%		L0P8Q5              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #663. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 P.jiroveci:290

Q5KIM4              	100.00%		L0PE53              	100.00%
Bootstrap support for Q5KIM4 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #664. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.jiroveci:289

Q5KB98              	100.00%		L0PFE9              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 99%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #665. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 P.jiroveci:289

Q5KK64              	100.00%		L0P9M9              	100.00%
Bootstrap support for Q5KK64 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #666. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.jiroveci:287

Q5K777              	100.00%		L0PEW5              	100.00%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #667. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.jiroveci:287

Q5K6X5              	100.00%		L0PHT7              	100.00%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #668. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 P.jiroveci:287

Q5KHZ3              	100.00%		L0PE89              	100.00%
Bootstrap support for Q5KHZ3 as seed ortholog is 100%.
Bootstrap support for L0PE89 as seed ortholog is 100%.

Group of orthologs #669. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.jiroveci:287

Q5KQ60              	100.00%		L0PDL9              	100.00%
Bootstrap support for Q5KQ60 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #670. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 P.jiroveci:286

Q5K8Q5              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	48.32%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #671. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 P.jiroveci:286

Q5KPS8              	100.00%		L0PDF9              	100.00%
Bootstrap support for Q5KPS8 as seed ortholog is 100%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #672. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.jiroveci:181

Q5KI02              	100.00%		L0PBE5              	100.00%
Q5KHX6              	51.29%		
Bootstrap support for Q5KI02 as seed ortholog is 91%.
Bootstrap support for L0PBE5 as seed ortholog is 99%.

Group of orthologs #673. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.jiroveci:285

Q5KC89              	100.00%		L0P9T2              	100.00%
Bootstrap support for Q5KC89 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #674. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 P.jiroveci:285

Q5KKJ4              	100.00%		L0PDA9              	100.00%
Bootstrap support for Q5KKJ4 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #675. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 P.jiroveci:284

Q5KDM0              	100.00%		L0PD02              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #676. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 P.jiroveci:283

Q5KBP2              	100.00%		L0P7Q3              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #677. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.jiroveci:118

Q5K7Y4              	100.00%		L0PHK8              	100.00%
Bootstrap support for Q5K7Y4 as seed ortholog is 99%.
Bootstrap support for L0PHK8 as seed ortholog is 99%.

Group of orthologs #678. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.jiroveci:282

Q5K6T5              	100.00%		L0P9S4              	100.00%
Bootstrap support for Q5K6T5 as seed ortholog is 100%.
Bootstrap support for L0P9S4 as seed ortholog is 100%.

Group of orthologs #679. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.jiroveci:235

Q5K810              	100.00%		L0PGP6              	100.00%
Bootstrap support for Q5K810 as seed ortholog is 100%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #680. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.jiroveci:147

Q5KK51              	100.00%		L0PCY2              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #681. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 P.jiroveci:282

Q5KLE7              	100.00%		L0PE17              	100.00%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #682. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.jiroveci:280

Q5KBK2              	100.00%		L0PF63              	100.00%
Bootstrap support for Q5KBK2 as seed ortholog is 100%.
Bootstrap support for L0PF63 as seed ortholog is 100%.

Group of orthologs #683. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.jiroveci:280

Q5KJ01              	100.00%		L0PDZ2              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #684. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.jiroveci:280

Q5KMI7              	100.00%		L0PC45              	100.00%
Bootstrap support for Q5KMI7 as seed ortholog is 100%.
Bootstrap support for L0PC45 as seed ortholog is 100%.

Group of orthologs #685. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 P.jiroveci:280

Q5KK34              	100.00%		L0PHM9              	100.00%
Bootstrap support for Q5KK34 as seed ortholog is 100%.
Bootstrap support for L0PHM9 as seed ortholog is 100%.

Group of orthologs #686. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.jiroveci:279

Q5KDR0              	100.00%		L0PE61              	100.00%
Q5KDL9              	10.67%		
Bootstrap support for Q5KDR0 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #687. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.jiroveci:128

P0CM16              	100.00%		L0P9E4              	100.00%
Bootstrap support for P0CM16 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 100%.

Group of orthologs #688. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 P.jiroveci:279

Q5KNA8              	100.00%		L0PBQ0              	100.00%
Bootstrap support for Q5KNA8 as seed ortholog is 100%.
Bootstrap support for L0PBQ0 as seed ortholog is 100%.

Group of orthologs #689. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 P.jiroveci:278

Q5KLM2              	100.00%		L0PDR0              	100.00%
Bootstrap support for Q5KLM2 as seed ortholog is 100%.
Bootstrap support for L0PDR0 as seed ortholog is 100%.

Group of orthologs #690. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.jiroveci:277

Q5KGU5              	100.00%		L0P896              	100.00%
Bootstrap support for Q5KGU5 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #691. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.jiroveci:277

Q5KP54              	100.00%		L0PCV1              	100.00%
Bootstrap support for Q5KP54 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #692. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 P.jiroveci:277

Q5KM57              	100.00%		L0PFX1              	100.00%
Bootstrap support for Q5KM57 as seed ortholog is 100%.
Bootstrap support for L0PFX1 as seed ortholog is 100%.

Group of orthologs #693. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 P.jiroveci:276

Q5KQ43              	100.00%		L0P8N3              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #694. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.jiroveci:275

Q5KDZ2              	100.00%		L0P877              	100.00%
                    	       		L0PF47              	33.73%
Bootstrap support for Q5KDZ2 as seed ortholog is 100%.
Bootstrap support for L0P877 as seed ortholog is 100%.

Group of orthologs #695. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.jiroveci:275

P0CN66              	100.00%		L0PCK8              	100.00%
Bootstrap support for P0CN66 as seed ortholog is 100%.
Bootstrap support for L0PCK8 as seed ortholog is 100%.

Group of orthologs #696. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.jiroveci:275

Q5KDE6              	100.00%		L0PBP3              	100.00%
Bootstrap support for Q5KDE6 as seed ortholog is 100%.
Bootstrap support for L0PBP3 as seed ortholog is 100%.

Group of orthologs #697. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.jiroveci:275

Q5KEX2              	100.00%		L0PDT4              	100.00%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #698. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 P.jiroveci:275

Q5KGJ7              	100.00%		L0PDG3              	100.00%
Bootstrap support for Q5KGJ7 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #699. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.jiroveci:274

Q5K6U3              	100.00%		L0PCP6              	100.00%
Bootstrap support for Q5K6U3 as seed ortholog is 100%.
Bootstrap support for L0PCP6 as seed ortholog is 100%.

Group of orthologs #700. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.jiroveci:274

Q5KIQ7              	100.00%		L0PBQ1              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #701. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 P.jiroveci:274

Q5KPY3              	100.00%		L0PFL6              	100.00%
Bootstrap support for Q5KPY3 as seed ortholog is 100%.
Bootstrap support for L0PFL6 as seed ortholog is 100%.

Group of orthologs #702. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:139

Q5KIE9              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	77.87%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 99%.

Group of orthologs #703. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:272

P0CR92              	100.00%		L0P7U2              	100.00%
Bootstrap support for P0CR92 as seed ortholog is 100%.
Bootstrap support for L0P7U2 as seed ortholog is 100%.

Group of orthologs #704. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:272

P0CR26              	100.00%		L0PCK3              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #705. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:272

Q5KH66              	100.00%		L0P8L5              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #706. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:272

Q5KJ10              	100.00%		L0PG02              	100.00%
Bootstrap support for Q5KJ10 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #707. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 P.jiroveci:272

Q5KK81              	100.00%		L0PG44              	100.00%
Bootstrap support for Q5KK81 as seed ortholog is 100%.
Bootstrap support for L0PG44 as seed ortholog is 100%.

Group of orthologs #708. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 P.jiroveci:270

Q5KG94              	100.00%		L0P9N2              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #709. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.jiroveci:270

Q5KLG9              	100.00%		L0P8B4              	100.00%
Bootstrap support for Q5KLG9 as seed ortholog is 99%.
Bootstrap support for L0P8B4 as seed ortholog is 100%.

Group of orthologs #710. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.jiroveci:269

Q5KFA7              	100.00%		L0P8T6              	100.00%
Bootstrap support for Q5KFA7 as seed ortholog is 100%.
Bootstrap support for L0P8T6 as seed ortholog is 100%.

Group of orthologs #711. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.jiroveci:214

Q5KI86              	100.00%		L0PF24              	100.00%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for L0PF24 as seed ortholog is 100%.

Group of orthologs #712. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 P.jiroveci:269

Q5KND4              	100.00%		L0PDH2              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #713. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:269

Q5KPB4              	100.00%		L0PF67              	100.00%
Bootstrap support for Q5KPB4 as seed ortholog is 100%.
Bootstrap support for L0PF67 as seed ortholog is 100%.

Group of orthologs #714. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:170 P.jiroveci:268

P0CP14              	100.00%		L0PDS3              	100.00%
Bootstrap support for P0CP14 as seed ortholog is 100%.
Bootstrap support for L0PDS3 as seed ortholog is 100%.

Group of orthologs #715. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.jiroveci:268

Q5KCN2              	100.00%		L0P8B3              	100.00%
Bootstrap support for Q5KCN2 as seed ortholog is 100%.
Bootstrap support for L0P8B3 as seed ortholog is 100%.

Group of orthologs #716. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.jiroveci:268

Q5KKF8              	100.00%		L0PBS3              	100.00%
Bootstrap support for Q5KKF8 as seed ortholog is 100%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #717. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.jiroveci:267

Q5KB01              	100.00%		L0PES4              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #718. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 P.jiroveci:267

Q5KD59              	100.00%		L0PET7              	100.00%
Bootstrap support for Q5KD59 as seed ortholog is 100%.
Bootstrap support for L0PET7 as seed ortholog is 100%.

Group of orthologs #719. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.jiroveci:267

Q5KHB0              	100.00%		L0PFH2              	100.00%
Bootstrap support for Q5KHB0 as seed ortholog is 99%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #720. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.jiroveci:266

Q5K6Y9              	100.00%		L0PA23              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #721. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 P.jiroveci:266

Q5KD79              	100.00%		L0PEG2              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #722. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:265

Q5KLR2              	100.00%		L0PBL5              	100.00%
Q5KLQ4              	42.34%		
Bootstrap support for Q5KLR2 as seed ortholog is 100%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #723. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.jiroveci:265

Q5KI33              	100.00%		L0P9S6              	100.00%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for L0P9S6 as seed ortholog is 100%.

Group of orthologs #724. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.jiroveci:265

Q5KJJ9              	100.00%		L0PB31              	100.00%
Bootstrap support for Q5KJJ9 as seed ortholog is 100%.
Bootstrap support for L0PB31 as seed ortholog is 100%.

Group of orthologs #725. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.jiroveci:265

Q5KMS8              	100.00%		L0P9F8              	100.00%
Bootstrap support for Q5KMS8 as seed ortholog is 100%.
Bootstrap support for L0P9F8 as seed ortholog is 100%.

Group of orthologs #726. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.jiroveci:265

Q5KEQ0              	100.00%		L0PHL0              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for L0PHL0 as seed ortholog is 100%.

Group of orthologs #727. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.jiroveci:265

Q5KN84              	100.00%		L0PGF8              	100.00%
Bootstrap support for Q5KN84 as seed ortholog is 100%.
Bootstrap support for L0PGF8 as seed ortholog is 100%.

Group of orthologs #728. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 P.jiroveci:265

Q5KNF4              	100.00%		L0PHK3              	100.00%
Bootstrap support for Q5KNF4 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #729. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 P.jiroveci:264

Q5KAQ7              	100.00%		L0P9T5              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #730. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 P.jiroveci:263

Q5KCD2              	100.00%		L0PDI1              	100.00%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #731. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.jiroveci:262

Q5KE38              	100.00%		L0P9Q8              	100.00%
Bootstrap support for Q5KE38 as seed ortholog is 100%.
Bootstrap support for L0P9Q8 as seed ortholog is 100%.

Group of orthologs #732. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.jiroveci:262

Q5KCU5              	100.00%		L0PCK9              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for L0PCK9 as seed ortholog is 100%.

Group of orthologs #733. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.jiroveci:262

Q5KGU0              	100.00%		L0PAQ7              	100.00%
Bootstrap support for Q5KGU0 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 100%.

Group of orthologs #734. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.jiroveci:210

Q5KCJ8              	100.00%		L0PFY7              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 100%.

Group of orthologs #735. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:262

Q5KLK2              	100.00%		L0P9U1              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #736. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.jiroveci:262

Q5KFG2              	100.00%		L0PFU1              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #737. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.jiroveci:262

Q5KIN9              	100.00%		L0PDI7              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #738. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 P.jiroveci:261

Q5K8T6              	100.00%		L0PA72              	100.00%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #739. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 P.jiroveci:260

Q5K8G1              	100.00%		L0P8T4              	100.00%
Bootstrap support for Q5K8G1 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #740. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 P.jiroveci:260

Q5KKG9              	100.00%		L0PGV8              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #741. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.jiroveci:259

Q5KEZ6              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	73.86%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #742. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.jiroveci:259

Q5KP79              	100.00%		L0P9J6              	100.00%
                    	       		L0PH67              	86.29%
Bootstrap support for Q5KP79 as seed ortholog is 100%.
Bootstrap support for L0P9J6 as seed ortholog is 100%.

Group of orthologs #743. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.jiroveci:259

Q5KHA2              	100.00%		L0P8F0              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #744. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.jiroveci:258

P0CP16              	100.00%		L0PBK8              	100.00%
Bootstrap support for P0CP16 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #745. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 P.jiroveci:258

Q5KLZ2              	100.00%		L0PDX4              	100.00%
Bootstrap support for Q5KLZ2 as seed ortholog is 100%.
Bootstrap support for L0PDX4 as seed ortholog is 100%.

Group of orthologs #746. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.jiroveci:257

Q5K890              	100.00%		L0PID4              	100.00%
                    	       		L0PGF7              	29.14%
Bootstrap support for Q5K890 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #747. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.jiroveci:257

Q5KIV0              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	90.15%
Bootstrap support for Q5KIV0 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #748. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.jiroveci:257

P0CR14              	100.00%		L0P9I5              	100.00%
Bootstrap support for P0CR14 as seed ortholog is 100%.
Bootstrap support for L0P9I5 as seed ortholog is 100%.

Group of orthologs #749. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 P.jiroveci:257

Q5KEY2              	100.00%		L0PH42              	100.00%
Bootstrap support for Q5KEY2 as seed ortholog is 100%.
Bootstrap support for L0PH42 as seed ortholog is 100%.

Group of orthologs #750. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 P.jiroveci:256

Q5KLV9              	100.00%		L0P7I8              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for L0P7I8 as seed ortholog is 100%.

Group of orthologs #751. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 P.jiroveci:255

Q5KC07              	100.00%		L0PB11              	100.00%
Bootstrap support for Q5KC07 as seed ortholog is 100%.
Bootstrap support for L0PB11 as seed ortholog is 100%.

Group of orthologs #752. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:45 P.jiroveci:90

Q5KCH7              	100.00%		L0PGT4              	100.00%
Bootstrap support for Q5KCH7 as seed ortholog is 84%.
Bootstrap support for L0PGT4 as seed ortholog is 98%.

Group of orthologs #753. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.jiroveci:253

Q5KF11              	100.00%		L0PCZ4              	100.00%
Bootstrap support for Q5KF11 as seed ortholog is 100%.
Bootstrap support for L0PCZ4 as seed ortholog is 100%.

Group of orthologs #754. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 P.jiroveci:253

Q5KQ17              	100.00%		L0PGE7              	100.00%
Bootstrap support for Q5KQ17 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #755. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.jiroveci:252

Q5KBU1              	100.00%		L0P804              	100.00%
Bootstrap support for Q5KBU1 as seed ortholog is 100%.
Bootstrap support for L0P804 as seed ortholog is 100%.

Group of orthologs #756. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.jiroveci:252

Q5KF72              	100.00%		L0P876              	100.00%
Bootstrap support for Q5KF72 as seed ortholog is 99%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #757. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 P.jiroveci:252

Q5KDU8              	100.00%		L0PBE0              	100.00%
Bootstrap support for Q5KDU8 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #758. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 P.jiroveci:183

P0CR62              	100.00%		L0P8J9              	100.00%
Bootstrap support for P0CR62 as seed ortholog is 100%.
Bootstrap support for L0P8J9 as seed ortholog is 100%.

Group of orthologs #759. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 P.jiroveci:251

Q5KE11              	100.00%		L0PC75              	100.00%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #760. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.jiroveci:250

Q5KAB1              	100.00%		L0P8Q6              	100.00%
Bootstrap support for Q5KAB1 as seed ortholog is 100%.
Bootstrap support for L0P8Q6 as seed ortholog is 100%.

Group of orthologs #761. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.jiroveci:250

Q5KKT8              	100.00%		L0PDZ3              	100.00%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #762. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.jiroveci:250

Q5KNM5              	100.00%		L0PFH9              	100.00%
Bootstrap support for Q5KNM5 as seed ortholog is 100%.
Bootstrap support for L0PFH9 as seed ortholog is 100%.

Group of orthologs #763. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.jiroveci:249

Q5K9R8              	100.00%		L0P996              	100.00%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for L0P996 as seed ortholog is 100%.

Group of orthologs #764. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.jiroveci:249

Q5K936              	100.00%		L0PAM5              	100.00%
Bootstrap support for Q5K936 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #765. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.jiroveci:249

Q5KEK8              	100.00%		L0PE93              	100.00%
Bootstrap support for Q5KEK8 as seed ortholog is 100%.
Bootstrap support for L0PE93 as seed ortholog is 100%.

Group of orthologs #766. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 P.jiroveci:249

Q5KI08              	100.00%		L0PGL3              	100.00%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for L0PGL3 as seed ortholog is 100%.

Group of orthologs #767. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 P.jiroveci:248

Q5KCE5              	100.00%		L0P9M7              	100.00%
Bootstrap support for Q5KCE5 as seed ortholog is 100%.
Bootstrap support for L0P9M7 as seed ortholog is 100%.

Group of orthologs #768. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.jiroveci:247

Q5K6V6              	100.00%		L0PG86              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #769. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.jiroveci:247

Q5KG36              	100.00%		L0PF73              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #770. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.jiroveci:246

Q5KBK7              	100.00%		L0P9F9              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for L0P9F9 as seed ortholog is 100%.

Group of orthologs #771. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.jiroveci:246

Q5KJD4              	100.00%		L0P7H2              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #772. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.jiroveci:246

Q5KDD6              	100.00%		L0PHL1              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #773. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 P.jiroveci:245

Q5KA19              	100.00%		L0PAM2              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #774. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 P.jiroveci:245

P0CQ58              	100.00%		L0PFL8              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #775. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.jiroveci:112

Q5KDV8              	100.00%		L0PGE5              	100.00%
Bootstrap support for Q5KDV8 as seed ortholog is 99%.
Bootstrap support for L0PGE5 as seed ortholog is 100%.

Group of orthologs #776. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 P.jiroveci:245

Q5KHW9              	100.00%		L0PGI1              	100.00%
Bootstrap support for Q5KHW9 as seed ortholog is 100%.
Bootstrap support for L0PGI1 as seed ortholog is 100%.

Group of orthologs #777. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.jiroveci:243

P0CR18              	100.00%		L0PFR9              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #778. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.jiroveci:243

Q5KDH9              	100.00%		L0PAJ0              	100.00%
Bootstrap support for Q5KDH9 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #779. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.jiroveci:243

Q5KIB2              	100.00%		L0P9I3              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #780. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.jiroveci:243

Q5KDI9              	100.00%		L0PEL2              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #781. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.jiroveci:243

Q5KLL4              	100.00%		L0PBV6              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #782. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.jiroveci:242

Q5KD61              	100.00%		L0PBX4              	100.00%
Bootstrap support for Q5KD61 as seed ortholog is 100%.
Bootstrap support for L0PBX4 as seed ortholog is 100%.

Group of orthologs #783. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 P.jiroveci:242

Q5KFG4              	100.00%		L0PG17              	100.00%
Bootstrap support for Q5KFG4 as seed ortholog is 100%.
Bootstrap support for L0PG17 as seed ortholog is 100%.

Group of orthologs #784. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.jiroveci:241

Q5KGC9              	100.00%		L0PIJ3              	100.00%
                    	       		L0PEP1              	83.10%
Bootstrap support for Q5KGC9 as seed ortholog is 99%.
Bootstrap support for L0PIJ3 as seed ortholog is 100%.

Group of orthologs #785. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.jiroveci:241

Q5KEP7              	100.00%		L0P9Z5              	100.00%
Bootstrap support for Q5KEP7 as seed ortholog is 99%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #786. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 P.jiroveci:241

Q5KHA1              	100.00%		L0P8C9              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #787. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 P.jiroveci:241

Q5KJH7              	100.00%		L0P9P8              	100.00%
Bootstrap support for Q5KJH7 as seed ortholog is 100%.
Bootstrap support for L0P9P8 as seed ortholog is 100%.

Group of orthologs #788. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 P.jiroveci:241

Q5KLT6              	100.00%		L0P9Q6              	100.00%
Bootstrap support for Q5KLT6 as seed ortholog is 100%.
Bootstrap support for L0P9Q6 as seed ortholog is 100%.

Group of orthologs #789. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.jiroveci:240

Q5KAJ5              	100.00%		L0P8Z8              	100.00%
                    	       		L0PFN6              	75.23%
Bootstrap support for Q5KAJ5 as seed ortholog is 100%.
Bootstrap support for L0P8Z8 as seed ortholog is 100%.

Group of orthologs #790. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.jiroveci:240

P0CO46              	100.00%		L0PCU0              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #791. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.jiroveci:240

Q5KEW0              	100.00%		L0PDJ6              	100.00%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #792. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 P.jiroveci:240

Q5KFF3              	100.00%		L0PFC0              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #793. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 P.jiroveci:239

P0CO40              	100.00%		L0P7C4              	100.00%
Bootstrap support for P0CO40 as seed ortholog is 100%.
Bootstrap support for L0P7C4 as seed ortholog is 100%.

Group of orthologs #794. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.jiroveci:239

Q5KA61              	100.00%		L0PFK9              	100.00%
Bootstrap support for Q5KA61 as seed ortholog is 99%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #795. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 P.jiroveci:238

Q5KB80              	100.00%		L0PH81              	100.00%
                    	       		L0PET0              	86.86%
Bootstrap support for Q5KB80 as seed ortholog is 100%.
Bootstrap support for L0PH81 as seed ortholog is 100%.

Group of orthologs #796. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:115 P.jiroveci:168

Q5KNZ3              	100.00%		L0PC81              	100.00%
Bootstrap support for Q5KNZ3 as seed ortholog is 99%.
Bootstrap support for L0PC81 as seed ortholog is 100%.

Group of orthologs #797. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 P.jiroveci:237

Q5KJ08              	100.00%		L0P9D6              	100.00%
Bootstrap support for Q5KJ08 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #798. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.jiroveci:236

Q5KC79              	100.00%		L0PEN4              	100.00%
Q5KKB7              	100.00%		
Q5KGQ4              	77.15%		
Q5K8W0              	73.42%		
Q5KD28              	56.80%		
Q5K6S8              	12.41%		
Q5KMZ2              	11.23%		
Q5KCC5              	10.91%		
Q5KA16              	8.56%		
Bootstrap support for Q5KC79 as seed ortholog is 73%.
Alternative seed ortholog is Q5KC74 (24 bits away from this cluster)
Bootstrap support for Q5KKB7 as seed ortholog is 73%.
Alternative seed ortholog is Q5KC74 (24 bits away from this cluster)
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #799. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 P.jiroveci:236

Q5KH50              	100.00%		L0PFQ3              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #800. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.jiroveci:235

P0CS44              	100.00%		L0P9W8              	100.00%
                    	       		L0PH99              	56.55%
Bootstrap support for P0CS44 as seed ortholog is 99%.
Bootstrap support for L0P9W8 as seed ortholog is 100%.

Group of orthologs #801. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.jiroveci:160

P0CR64              	100.00%		L0PC40              	100.00%
Bootstrap support for P0CR64 as seed ortholog is 100%.
Bootstrap support for L0PC40 as seed ortholog is 100%.

Group of orthologs #802. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.jiroveci:235

Q5K8Y6              	100.00%		L0PD35              	100.00%
Bootstrap support for Q5K8Y6 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #803. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.jiroveci:235

Q5KHT0              	100.00%		L0PD65              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #804. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.jiroveci:235

Q5KL73              	100.00%		L0PAL5              	100.00%
Bootstrap support for Q5KL73 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #805. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 P.jiroveci:235

Q5KK29              	100.00%		L0PG68              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for L0PG68 as seed ortholog is 100%.

Group of orthologs #806. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 P.jiroveci:234

Q5K8R7              	100.00%		L0PD44              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #807. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:169 P.jiroveci:233

P0CR34              	100.00%		L0PD97              	100.00%
Bootstrap support for P0CR34 as seed ortholog is 100%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #808. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 P.jiroveci:233

Q5KKQ0              	100.00%		L0P9Y7              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #809. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.jiroveci:232

Q5KAI5              	100.00%		L0PAC1              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #810. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 P.jiroveci:232

Q5KDG1              	100.00%		L0P8D7              	100.00%
Bootstrap support for Q5KDG1 as seed ortholog is 100%.
Bootstrap support for L0P8D7 as seed ortholog is 100%.

Group of orthologs #811. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.jiroveci:231

P0CO62              	100.00%		L0P701              	100.00%
Bootstrap support for P0CO62 as seed ortholog is 100%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #812. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.jiroveci:231

P0CR82              	100.00%		L0P9X0              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #813. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 P.jiroveci:231

P0CQ60              	100.00%		L0PH55              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #814. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.jiroveci:231

Q5KAP0              	100.00%		L0PD63              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 100%.
Bootstrap support for L0PD63 as seed ortholog is 100%.

Group of orthologs #815. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.jiroveci:230

Q5KB61              	100.00%		L0P6R0              	100.00%
Bootstrap support for Q5KB61 as seed ortholog is 100%.
Bootstrap support for L0P6R0 as seed ortholog is 100%.

Group of orthologs #816. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.jiroveci:230

Q5KD80              	100.00%		L0P9G1              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #817. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 P.jiroveci:230

Q5KB21              	100.00%		L0PBX9              	100.00%
Bootstrap support for Q5KB21 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #818. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.jiroveci:229

Q5KAI7              	100.00%		L0P968              	100.00%
Bootstrap support for Q5KAI7 as seed ortholog is 100%.
Bootstrap support for L0P968 as seed ortholog is 100%.

Group of orthologs #819. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.jiroveci:229

Q5KFR3              	100.00%		L0PFD7              	100.00%
Bootstrap support for Q5KFR3 as seed ortholog is 100%.
Bootstrap support for L0PFD7 as seed ortholog is 100%.

Group of orthologs #820. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.jiroveci:228

P0CO06              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	54.41%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #821. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.jiroveci:228

Q5KKD1              	100.00%		L0PA86              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #822. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.jiroveci:228

Q5KHS0              	100.00%		L0PFB5              	100.00%
Bootstrap support for Q5KHS0 as seed ortholog is 100%.
Bootstrap support for L0PFB5 as seed ortholog is 100%.

Group of orthologs #823. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 P.jiroveci:228

Q5KND0              	100.00%		L0PBM3              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for L0PBM3 as seed ortholog is 100%.

Group of orthologs #824. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.jiroveci:227

Q5KAA2              	100.00%		L0PD09              	100.00%
Q5KLV1              	6.12%		
Bootstrap support for Q5KAA2 as seed ortholog is 99%.
Bootstrap support for L0PD09 as seed ortholog is 100%.

Group of orthologs #825. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.jiroveci:49

Q5K913              	100.00%		L0PB76              	100.00%
Bootstrap support for Q5K913 as seed ortholog is 99%.
Bootstrap support for L0PB76 as seed ortholog is 86%.

Group of orthologs #826. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.jiroveci:227

Q5KIF5              	100.00%		L0PAG4              	100.00%
Bootstrap support for Q5KIF5 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #827. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:135 P.jiroveci:227

Q5KG24              	100.00%		L0PEQ4              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 99%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #828. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.jiroveci:227

Q5KJC9              	100.00%		L0PBZ6              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #829. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 P.jiroveci:227

Q5KMD7              	100.00%		L0PB09              	100.00%
Bootstrap support for Q5KMD7 as seed ortholog is 100%.
Bootstrap support for L0PB09 as seed ortholog is 100%.

Group of orthologs #830. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.jiroveci:226

Q5K6Z1              	100.00%		L0PAU4              	100.00%
Bootstrap support for Q5K6Z1 as seed ortholog is 100%.
Bootstrap support for L0PAU4 as seed ortholog is 100%.

Group of orthologs #831. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.jiroveci:226

Q5KP38              	100.00%		L0PC68              	100.00%
Bootstrap support for Q5KP38 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #832. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.jiroveci:225

P0CO86              	100.00%		L0PBL1              	100.00%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #833. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.jiroveci:225

Q5KMC2              	100.00%		L0PAM9              	100.00%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for L0PAM9 as seed ortholog is 100%.

Group of orthologs #834. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.jiroveci:225

Q5KLS0              	100.00%		L0PGX9              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 100%.

Group of orthologs #835. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.jiroveci:224

Q5K9R4              	100.00%		L0P7R4              	100.00%
Bootstrap support for Q5K9R4 as seed ortholog is 100%.
Bootstrap support for L0P7R4 as seed ortholog is 100%.

Group of orthologs #836. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.jiroveci:224

Q5K9W6              	100.00%		L0PF44              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #837. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.jiroveci:224

Q5KIJ0              	100.00%		L0PBS5              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #838. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 P.jiroveci:224

Q5KIH5              	100.00%		L0PEC6              	100.00%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #839. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.jiroveci:223

Q5KEG8              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	62.88%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #840. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.jiroveci:223

Q5K6W6              	100.00%		L0PAV2              	100.00%
Bootstrap support for Q5K6W6 as seed ortholog is 100%.
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #841. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.jiroveci:223

P0CS14              	100.00%		L0PG23              	100.00%
Bootstrap support for P0CS14 as seed ortholog is 100%.
Bootstrap support for L0PG23 as seed ortholog is 100%.

Group of orthologs #842. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.jiroveci:222

Q5KIL7              	100.00%		L0P838              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #843. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.jiroveci:222

Q5KCX8              	100.00%		L0PEJ3              	100.00%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for L0PEJ3 as seed ortholog is 100%.

Group of orthologs #844. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.jiroveci:222

Q5KNF9              	100.00%		L0PBE8              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #845. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.jiroveci:145

Q5KNK6              	100.00%		L0PBK4              	100.00%
Bootstrap support for Q5KNK6 as seed ortholog is 100%.
Bootstrap support for L0PBK4 as seed ortholog is 99%.

Group of orthologs #846. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 P.jiroveci:182

Q5KKN8              	100.00%		L0PG93              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 99%.

Group of orthologs #847. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.jiroveci:221

Q5K7W0              	100.00%		L0P847              	100.00%
Bootstrap support for Q5K7W0 as seed ortholog is 100%.
Bootstrap support for L0P847 as seed ortholog is 100%.

Group of orthologs #848. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.jiroveci:221

P0CN10              	100.00%		L0PGD6              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #849. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.jiroveci:221

Q5KAK1              	100.00%		L0PCI8              	100.00%
Bootstrap support for Q5KAK1 as seed ortholog is 99%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #850. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.jiroveci:221

Q5KCX4              	100.00%		L0PEJ7              	100.00%
Bootstrap support for Q5KCX4 as seed ortholog is 100%.
Bootstrap support for L0PEJ7 as seed ortholog is 100%.

Group of orthologs #851. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.jiroveci:221

Q5KHK9              	100.00%		L0PAZ5              	100.00%
Bootstrap support for Q5KHK9 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #852. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.jiroveci:221

Q5KM08              	100.00%		L0PH06              	100.00%
Bootstrap support for Q5KM08 as seed ortholog is 100%.
Bootstrap support for L0PH06 as seed ortholog is 100%.

Group of orthologs #853. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.jiroveci:220

Q5KGB2              	100.00%		L0PAP9              	100.00%
Bootstrap support for Q5KGB2 as seed ortholog is 99%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #854. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 P.jiroveci:220

Q5KEC3              	100.00%		L0PDX6              	100.00%
Bootstrap support for Q5KEC3 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #855. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.jiroveci:219

Q5K9Y4              	100.00%		L0PGQ4              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #856. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.jiroveci:102

Q5KKF5              	100.00%		L0PEA5              	100.00%
Bootstrap support for Q5KKF5 as seed ortholog is 96%.
Bootstrap support for L0PEA5 as seed ortholog is 99%.

Group of orthologs #857. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.jiroveci:219

Q5KIG1              	100.00%		L0PGN0              	100.00%
Bootstrap support for Q5KIG1 as seed ortholog is 100%.
Bootstrap support for L0PGN0 as seed ortholog is 100%.

Group of orthologs #858. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.jiroveci:219

Q5KN16              	100.00%		L0PE85              	100.00%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #859. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:218

Q5KA46              	100.00%		L0PE58              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #860. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:218

Q5KDJ7              	100.00%		L0PC53              	100.00%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #861. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:218

Q5KK73              	100.00%		L0P7L9              	100.00%
Bootstrap support for Q5KK73 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #862. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 P.jiroveci:218

Q5KL68              	100.00%		L0P8G7              	100.00%
Bootstrap support for Q5KL68 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #863. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:110 P.jiroveci:162

Q5KGZ4              	100.00%		L0PHW8              	100.00%
Bootstrap support for Q5KGZ4 as seed ortholog is 100%.
Bootstrap support for L0PHW8 as seed ortholog is 100%.

Group of orthologs #864. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.jiroveci:217

Q5KP63              	100.00%		L0P9F7              	100.00%
                    	       		L0PGP0              	83.65%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #865. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.jiroveci:217

Q5KBG5              	100.00%		L0P800              	100.00%
Bootstrap support for Q5KBG5 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #866. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.jiroveci:217

P0CS08              	100.00%		L0PFH7              	100.00%
Bootstrap support for P0CS08 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #867. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.jiroveci:217

Q5KGK6              	100.00%		L0P768              	100.00%
Bootstrap support for Q5KGK6 as seed ortholog is 100%.
Bootstrap support for L0P768 as seed ortholog is 100%.

Group of orthologs #868. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.jiroveci:217

Q5KBR5              	100.00%		L0PG81              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #869. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 P.jiroveci:217

Q5KKJ2              	100.00%		L0PCB3              	100.00%
Bootstrap support for Q5KKJ2 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #870. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.jiroveci:216

Q5KFT1              	100.00%		L0P8X1              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #871. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 P.jiroveci:216

Q5KJ50              	100.00%		L0P9W3              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #872. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.jiroveci:215

Q5K9C2              	100.00%		L0P9S9              	100.00%
                    	       		L0PDT3              	38.26%
Bootstrap support for Q5K9C2 as seed ortholog is 99%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #873. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.jiroveci:156

Q5KK41              	100.00%		L0PIS9              	100.00%
Q5K8I9              	8.45%		
Bootstrap support for Q5KK41 as seed ortholog is 99%.
Bootstrap support for L0PIS9 as seed ortholog is 100%.

Group of orthologs #874. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.jiroveci:215

Q5K851              	100.00%		L0PEC1              	100.00%
Bootstrap support for Q5K851 as seed ortholog is 100%.
Bootstrap support for L0PEC1 as seed ortholog is 100%.

Group of orthologs #875. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.jiroveci:215

Q5KBS2              	100.00%		L0PE77              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #876. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.jiroveci:215

Q5KDF6              	100.00%		L0PDJ2              	100.00%
Bootstrap support for Q5KDF6 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #877. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.jiroveci:142

Q5KKM2              	100.00%		L0PBF9              	100.00%
Bootstrap support for Q5KKM2 as seed ortholog is 99%.
Bootstrap support for L0PBF9 as seed ortholog is 99%.

Group of orthologs #878. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 P.jiroveci:215

Q5KKR0              	100.00%		L0PFV3              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #879. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.jiroveci:214

Q5K8H7              	100.00%		L0PCR8              	100.00%
                    	       		L0PH75              	91.44%
Bootstrap support for Q5K8H7 as seed ortholog is 100%.
Bootstrap support for L0PCR8 as seed ortholog is 100%.

Group of orthologs #880. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.jiroveci:214

Q5K7I5              	100.00%		L0P9Y2              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #881. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.jiroveci:214

P0CP82              	100.00%		L0PDB8              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 96%.
Bootstrap support for L0PDB8 as seed ortholog is 100%.

Group of orthologs #882. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.jiroveci:214

Q5KPF9              	100.00%		L0PBP9              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #883. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 P.jiroveci:214

Q5KP88              	100.00%		L0PEF8              	100.00%
Bootstrap support for Q5KP88 as seed ortholog is 100%.
Bootstrap support for L0PEF8 as seed ortholog is 100%.

Group of orthologs #884. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.jiroveci:213

Q5KES0              	100.00%		L0PAR1              	100.00%
Bootstrap support for Q5KES0 as seed ortholog is 99%.
Bootstrap support for L0PAR1 as seed ortholog is 100%.

Group of orthologs #885. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.jiroveci:213

Q5KE84              	100.00%		L0PC61              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #886. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 P.jiroveci:213

Q5KLA5              	100.00%		L0P895              	100.00%
Bootstrap support for Q5KLA5 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 100%.

Group of orthologs #887. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.jiroveci:212

Q5KHV7              	100.00%		L0PCK1              	100.00%
                    	       		L0PGI6              	67.79%
Bootstrap support for Q5KHV7 as seed ortholog is 56%.
Alternative seed ortholog is Q5KPD7 (20 bits away from this cluster)
Bootstrap support for L0PCK1 as seed ortholog is 100%.

Group of orthologs #888. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5K9E2              	100.00%		L0PA28              	100.00%
Bootstrap support for Q5K9E2 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 100%.

Group of orthologs #889. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KDK4              	100.00%		L0P8J0              	100.00%
Bootstrap support for Q5KDK4 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #890. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:164 P.jiroveci:212

Q5KM42              	100.00%		L0P839              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #891. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KGP0              	100.00%		L0PDR1              	100.00%
Bootstrap support for Q5KGP0 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 100%.

Group of orthologs #892. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KMZ4              	100.00%		L0P8T9              	100.00%
Bootstrap support for Q5KMZ4 as seed ortholog is 100%.
Bootstrap support for L0P8T9 as seed ortholog is 100%.

Group of orthologs #893. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KPJ7              	100.00%		L0P910              	100.00%
Bootstrap support for Q5KPJ7 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #894. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KP95              	100.00%		L0PB84              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #895. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KMY6              	100.00%		L0PCV5              	100.00%
Bootstrap support for Q5KMY6 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #896. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.jiroveci:212

Q5KPH8              	100.00%		L0PEB8              	100.00%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #897. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.jiroveci:211

Q5K7Z7              	100.00%		L0P8C3              	100.00%
Bootstrap support for Q5K7Z7 as seed ortholog is 100%.
Bootstrap support for L0P8C3 as seed ortholog is 100%.

Group of orthologs #898. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.jiroveci:211

Q5KC13              	100.00%		L0P949              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #899. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.jiroveci:161

Q5KCQ7              	100.00%		L0PDD3              	100.00%
Bootstrap support for Q5KCQ7 as seed ortholog is 100%.
Bootstrap support for L0PDD3 as seed ortholog is 100%.

Group of orthologs #900. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.jiroveci:211

Q5KGN1              	100.00%		L0PA17              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 100%.
Bootstrap support for L0PA17 as seed ortholog is 100%.

Group of orthologs #901. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.jiroveci:211

Q5KNS2              	100.00%		L0P923              	100.00%
Bootstrap support for Q5KNS2 as seed ortholog is 100%.
Bootstrap support for L0P923 as seed ortholog is 100%.

Group of orthologs #902. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:43 P.jiroveci:211

Q5KPE4              	100.00%		L0P9P5              	100.00%
Bootstrap support for Q5KPE4 as seed ortholog is 82%.
Bootstrap support for L0P9P5 as seed ortholog is 100%.

Group of orthologs #903. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.jiroveci:211

Q5KLU2              	100.00%		L0PEA4              	100.00%
Bootstrap support for Q5KLU2 as seed ortholog is 100%.
Bootstrap support for L0PEA4 as seed ortholog is 100%.

Group of orthologs #904. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.jiroveci:210

P0CM98              	100.00%		L0PDW7              	100.00%
                    	       		L0PIN1              	49.52%
Bootstrap support for P0CM98 as seed ortholog is 100%.
Bootstrap support for L0PDW7 as seed ortholog is 100%.

Group of orthologs #905. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.jiroveci:210

Q5K979              	100.00%		L0PB66              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #906. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.jiroveci:210

Q5KKV3              	100.00%		L0P834              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #907. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.jiroveci:210

Q5KMT0              	100.00%		L0P6S2              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #908. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.jiroveci:210

Q5KIY7              	100.00%		L0PBK2              	100.00%
Bootstrap support for Q5KIY7 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #909. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.jiroveci:210

Q5KHF6              	100.00%		L0PHE9              	100.00%
Bootstrap support for Q5KHF6 as seed ortholog is 100%.
Bootstrap support for L0PHE9 as seed ortholog is 100%.

Group of orthologs #910. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.jiroveci:210

Q5KNQ1              	100.00%		L0PG33              	100.00%
Bootstrap support for Q5KNQ1 as seed ortholog is 95%.
Bootstrap support for L0PG33 as seed ortholog is 100%.

Group of orthologs #911. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.jiroveci:208

Q5KG86              	100.00%		L0P8U3              	100.00%
Q5KG85              	58.50%		
Bootstrap support for Q5KG86 as seed ortholog is 100%.
Bootstrap support for L0P8U3 as seed ortholog is 100%.

Group of orthologs #912. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.jiroveci:208

Q5KBW8              	100.00%		L0P9L7              	100.00%
Bootstrap support for Q5KBW8 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #913. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.jiroveci:208

Q5K7F0              	100.00%		L0PFB6              	100.00%
Bootstrap support for Q5K7F0 as seed ortholog is 100%.
Bootstrap support for L0PFB6 as seed ortholog is 100%.

Group of orthologs #914. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.jiroveci:208

Q5KP66              	100.00%		L0P9T1              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for L0P9T1 as seed ortholog is 100%.

Group of orthologs #915. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.jiroveci:208

Q5KKX6              	100.00%		L0PF75              	100.00%
Bootstrap support for Q5KKX6 as seed ortholog is 99%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #916. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 P.jiroveci:207

P0CN94              	100.00%		L0P835              	100.00%
                    	       		L0P8K6              	34.43%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for L0P835 as seed ortholog is 100%.

Group of orthologs #917. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 P.jiroveci:207

Q5K888              	100.00%		L0P9K2              	100.00%
Bootstrap support for Q5K888 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #918. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.jiroveci:155

Q5KN24              	100.00%		L0PGN9              	100.00%
Q5KN90              	50.47%		
Bootstrap support for Q5KN24 as seed ortholog is 99%.
Bootstrap support for L0PGN9 as seed ortholog is 99%.

Group of orthologs #919. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.jiroveci:206

Q5KPS6              	100.00%		L0PFW4              	100.00%
Bootstrap support for Q5KPS6 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #920. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.jiroveci:151

Q5KGS1              	100.00%		L0P8M4              	100.00%
Bootstrap support for Q5KGS1 as seed ortholog is 99%.
Bootstrap support for L0P8M4 as seed ortholog is 100%.

Group of orthologs #921. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.jiroveci:205

Q5KKX5              	100.00%		L0P919              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #922. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.jiroveci:158

Q5KIX3              	100.00%		L0PDA0              	100.00%
Bootstrap support for Q5KIX3 as seed ortholog is 98%.
Bootstrap support for L0PDA0 as seed ortholog is 99%.

Group of orthologs #923. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 P.jiroveci:205

Q5KH26              	100.00%		L0PFP7              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #924. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 P.jiroveci:204

Q5KQ30              	100.00%		L0PBG0              	100.00%
Bootstrap support for Q5KQ30 as seed ortholog is 100%.
Bootstrap support for L0PBG0 as seed ortholog is 100%.

Group of orthologs #925. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.jiroveci:203

Q5K710              	100.00%		L0P8D5              	100.00%
Bootstrap support for Q5K710 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #926. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.jiroveci:112

P0CN98              	100.00%		L0PAY4              	100.00%
Bootstrap support for P0CN98 as seed ortholog is 99%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #927. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:130 P.jiroveci:203

Q5KB29              	100.00%		L0PBD5              	100.00%
Bootstrap support for Q5KB29 as seed ortholog is 100%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #928. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.jiroveci:203

Q5KLM0              	100.00%		L0P8S1              	100.00%
Bootstrap support for Q5KLM0 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #929. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.jiroveci:203

Q5KEU0              	100.00%		L0PHH9              	100.00%
Bootstrap support for Q5KEU0 as seed ortholog is 100%.
Bootstrap support for L0PHH9 as seed ortholog is 100%.

Group of orthologs #930. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.jiroveci:203

Q5KNH2              	100.00%		L0P9I0              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #931. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.jiroveci:203

Q5KN20              	100.00%		L0PFZ5              	100.00%
Bootstrap support for Q5KN20 as seed ortholog is 97%.
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #932. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.jiroveci:202

Q5KCX5              	100.00%		L0P8P0              	100.00%
Bootstrap support for Q5KCX5 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #933. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.jiroveci:202

Q5KEX8              	100.00%		L0PAE8              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #934. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.jiroveci:202

Q5KP07              	100.00%		L0P8K8              	100.00%
Bootstrap support for Q5KP07 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #935. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.jiroveci:201

P0CP84              	100.00%		L0PAA8              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 99%.
Bootstrap support for L0PAA8 as seed ortholog is 100%.

Group of orthologs #936. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.jiroveci:201

Q5KEY4              	100.00%		L0PA22              	100.00%
Bootstrap support for Q5KEY4 as seed ortholog is 100%.
Bootstrap support for L0PA22 as seed ortholog is 100%.

Group of orthologs #937. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.jiroveci:201

Q5KBT5              	100.00%		L0PDL5              	100.00%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #938. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 P.jiroveci:201

Q5KKZ0              	100.00%		L0PFI7              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 100%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #939. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.jiroveci:200

P0CO90              	100.00%		L0PG10              	100.00%
P0CO88              	6.17%		
Bootstrap support for P0CO90 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 100%.

Group of orthologs #940. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.jiroveci:200

P0CS16              	100.00%		L0P7B1              	100.00%
Bootstrap support for P0CS16 as seed ortholog is 100%.
Bootstrap support for L0P7B1 as seed ortholog is 100%.

Group of orthologs #941. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.jiroveci:118

Q5KCK9              	100.00%		L0PA51              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #942. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 P.jiroveci:200

Q5KGQ8              	100.00%		L0PEZ4              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #943. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.jiroveci:199

P0CN24              	100.00%		L0PAY0              	100.00%
Bootstrap support for P0CN24 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #944. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.jiroveci:199

Q5KLT0              	100.00%		L0P7A4              	100.00%
Bootstrap support for Q5KLT0 as seed ortholog is 99%.
Bootstrap support for L0P7A4 as seed ortholog is 100%.

Group of orthologs #945. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.jiroveci:199

Q5KLQ8              	100.00%		L0PAT1              	100.00%
Bootstrap support for Q5KLQ8 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #946. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 P.jiroveci:198

Q5KCR3              	100.00%		L0PF99              	100.00%
Bootstrap support for Q5KCR3 as seed ortholog is 100%.
Bootstrap support for L0PF99 as seed ortholog is 100%.

Group of orthologs #947. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.jiroveci:196

Q5KBW9              	100.00%		L0PC18              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #948. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.jiroveci:196

Q5KLP4              	100.00%		L0PFG0              	100.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for L0PFG0 as seed ortholog is 100%.

Group of orthologs #949. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 P.jiroveci:196

Q5KNA5              	100.00%		L0PEN7              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #950. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.jiroveci:195

Q5K8U4              	100.00%		L0PGP4              	100.00%
Bootstrap support for Q5K8U4 as seed ortholog is 100%.
Bootstrap support for L0PGP4 as seed ortholog is 100%.

Group of orthologs #951. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.jiroveci:195

Q5KCW6              	100.00%		L0PD20              	100.00%
Bootstrap support for Q5KCW6 as seed ortholog is 100%.
Bootstrap support for L0PD20 as seed ortholog is 100%.

Group of orthologs #952. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.jiroveci:195

Q5KMR2              	100.00%		L0PAR4              	100.00%
Bootstrap support for Q5KMR2 as seed ortholog is 100%.
Bootstrap support for L0PAR4 as seed ortholog is 100%.

Group of orthologs #953. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.jiroveci:195

Q5KPM6              	100.00%		L0PA05              	100.00%
Bootstrap support for Q5KPM6 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 100%.

Group of orthologs #954. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.jiroveci:194

P0CR78              	100.00%		L0PE36              	100.00%
Bootstrap support for P0CR78 as seed ortholog is 100%.
Bootstrap support for L0PE36 as seed ortholog is 100%.

Group of orthologs #955. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.jiroveci:194

Q5KD38              	100.00%		L0P8G3              	100.00%
Bootstrap support for Q5KD38 as seed ortholog is 100%.
Bootstrap support for L0P8G3 as seed ortholog is 100%.

Group of orthologs #956. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.jiroveci:194

Q5KID1              	100.00%		L0P9M4              	100.00%
Bootstrap support for Q5KID1 as seed ortholog is 100%.
Bootstrap support for L0P9M4 as seed ortholog is 100%.

Group of orthologs #957. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.jiroveci:194

Q5KLH8              	100.00%		L0PDW5              	100.00%
Bootstrap support for Q5KLH8 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #958. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.jiroveci:193

P0CR60              	100.00%		L0PBU1              	100.00%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #959. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.jiroveci:193

P0CO70              	100.00%		L0PGN3              	100.00%
Bootstrap support for P0CO70 as seed ortholog is 100%.
Bootstrap support for L0PGN3 as seed ortholog is 100%.

Group of orthologs #960. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 P.jiroveci:193

Q5KNG3              	100.00%		L0PH07              	100.00%
Bootstrap support for Q5KNG3 as seed ortholog is 100%.
Bootstrap support for L0PH07 as seed ortholog is 100%.

Group of orthologs #961. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.jiroveci:192

P0CS56              	100.00%		L0P9W5              	100.00%
Bootstrap support for P0CS56 as seed ortholog is 100%.
Bootstrap support for L0P9W5 as seed ortholog is 100%.

Group of orthologs #962. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:116 P.jiroveci:142

P0CS30              	100.00%		L0PFK0              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 98%.
Bootstrap support for L0PFK0 as seed ortholog is 99%.

Group of orthologs #963. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.jiroveci:192

Q5KH21              	100.00%		L0PBZ1              	100.00%
Bootstrap support for Q5KH21 as seed ortholog is 100%.
Bootstrap support for L0PBZ1 as seed ortholog is 100%.

Group of orthologs #964. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.jiroveci:192

Q5KMI3              	100.00%		L0PEG7              	100.00%
Bootstrap support for Q5KMI3 as seed ortholog is 100%.
Bootstrap support for L0PEG7 as seed ortholog is 100%.

Group of orthologs #965. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.jiroveci:191

Q5K7B3              	100.00%		L0PE43              	100.00%
Bootstrap support for Q5K7B3 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #966. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.jiroveci:191

Q5K6Z0              	100.00%		L0PGY0              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #967. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.jiroveci:191

Q5KAW3              	100.00%		L0PDN8              	100.00%
Bootstrap support for Q5KAW3 as seed ortholog is 100%.
Bootstrap support for L0PDN8 as seed ortholog is 100%.

Group of orthologs #968. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 P.jiroveci:191

Q5K8D6              	100.00%		L0PG39              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #969. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.jiroveci:190

Q5KCJ5              	100.00%		L0P8A5              	100.00%
                    	       		L0PBK7              	97.61%
Bootstrap support for Q5KCJ5 as seed ortholog is 97%.
Bootstrap support for L0P8A5 as seed ortholog is 100%.

Group of orthologs #970. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:190

Q5KGD2              	100.00%		L0PAW7              	100.00%
Q5KID2              	22.05%		
Bootstrap support for Q5KGD2 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #971. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:190

Q5KE85              	100.00%		L0P8Q1              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for L0P8Q1 as seed ortholog is 100%.

Group of orthologs #972. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:190

Q5K9P5              	100.00%		L0PGW6              	100.00%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #973. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:190

Q5KJ55              	100.00%		L0PE09              	100.00%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for L0PE09 as seed ortholog is 100%.

Group of orthologs #974. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.jiroveci:190

Q5KJN1              	100.00%		L0PF53              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #975. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.jiroveci:189

Q5KBE4              	100.00%		L0PBL8              	100.00%
                    	       		L0PDU3              	68.35%
Bootstrap support for Q5KBE4 as seed ortholog is 100%.
Bootstrap support for L0PBL8 as seed ortholog is 100%.

Group of orthologs #976. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.jiroveci:189

Q5K726              	100.00%		L0PC06              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #977. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.jiroveci:189

Q5KCZ1              	100.00%		L0PAR7              	100.00%
Bootstrap support for Q5KCZ1 as seed ortholog is 100%.
Bootstrap support for L0PAR7 as seed ortholog is 100%.

Group of orthologs #978. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 P.jiroveci:189

Q5KGY4              	100.00%		L0P9R7              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 100%.

Group of orthologs #979. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.jiroveci:84

P0CR48              	100.00%		L0PCJ0              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 95%.

Group of orthologs #980. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 P.jiroveci:188

Q5KDW4              	100.00%		L0PGA7              	100.00%
Bootstrap support for Q5KDW4 as seed ortholog is 100%.
Bootstrap support for L0PGA7 as seed ortholog is 100%.

Group of orthologs #981. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 P.jiroveci:187

Q5K850              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	90.49%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #982. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:186

Q5K8E1              	100.00%		L0PAD3              	100.00%
Bootstrap support for Q5K8E1 as seed ortholog is 100%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #983. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:186

Q5KAE9              	100.00%		L0P8P5              	100.00%
Bootstrap support for Q5KAE9 as seed ortholog is 100%.
Bootstrap support for L0P8P5 as seed ortholog is 100%.

Group of orthologs #984. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:186

Q5KBT3              	100.00%		L0P8Y0              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #985. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:186

Q5KJB6              	100.00%		L0PA77              	100.00%
Bootstrap support for Q5KJB6 as seed ortholog is 100%.
Bootstrap support for L0PA77 as seed ortholog is 100%.

Group of orthologs #986. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:186

Q5KIC8              	100.00%		L0PFS1              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #987. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.jiroveci:186

Q5KQ40              	100.00%		L0PE37              	100.00%
Bootstrap support for Q5KQ40 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #988. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 P.jiroveci:185

Q5KPZ4              	100.00%		L0P8Z0              	100.00%
                    	       		L0PC60              	96.57%
Bootstrap support for Q5KPZ4 as seed ortholog is 100%.
Bootstrap support for L0P8Z0 as seed ortholog is 100%.

Group of orthologs #989. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.jiroveci:184

Q5KDS9              	100.00%		L0PI61              	100.00%
                    	       		L0PA50              	26.63%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #990. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.jiroveci:184

Q5K766              	100.00%		L0PDE4              	100.00%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #991. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.jiroveci:184

P0CP40              	100.00%		L0PEI6              	100.00%
Bootstrap support for P0CP40 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #992. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.jiroveci:184

Q5KKD0              	100.00%		L0PAR5              	100.00%
Bootstrap support for Q5KKD0 as seed ortholog is 100%.
Bootstrap support for L0PAR5 as seed ortholog is 100%.

Group of orthologs #993. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:122 P.jiroveci:102

Q5KJK0              	100.00%		L0PFN2              	100.00%
Bootstrap support for Q5KJK0 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #994. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.jiroveci:184

Q5KJG2              	100.00%		L0PIT4              	100.00%
Bootstrap support for Q5KJG2 as seed ortholog is 100%.
Bootstrap support for L0PIT4 as seed ortholog is 100%.

Group of orthologs #995. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.jiroveci:183

Q5KIP7              	100.00%		L0P7L2              	100.00%
                    	       		L0PFZ6              	98.23%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for L0P7L2 as seed ortholog is 100%.

Group of orthologs #996. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.jiroveci:183

Q5KDD8              	100.00%		L0PBS7              	100.00%
Bootstrap support for Q5KDD8 as seed ortholog is 100%.
Bootstrap support for L0PBS7 as seed ortholog is 100%.

Group of orthologs #997. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.jiroveci:183

Q5KF86              	100.00%		L0PBL4              	100.00%
Bootstrap support for Q5KF86 as seed ortholog is 100%.
Bootstrap support for L0PBL4 as seed ortholog is 100%.

Group of orthologs #998. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.jiroveci:183

Q5KFQ4              	100.00%		L0PCP9              	100.00%
Bootstrap support for Q5KFQ4 as seed ortholog is 100%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #999. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.jiroveci:183

Q5KBC4              	100.00%		L0PHR2              	100.00%
Bootstrap support for Q5KBC4 as seed ortholog is 100%.
Bootstrap support for L0PHR2 as seed ortholog is 100%.