###################################
322 groups of orthologs
466 in-paralogs from C.neoformans
358 in-paralogs from P.aerophilum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 782 bits
Score difference with first non-orthologous sequence - C.neoformans:782 P.aerophilum:782

Q5K7V3              	100.00%		Q8ZY48              	100.00%
Bootstrap support for Q5K7V3 as seed ortholog is 100%.
Bootstrap support for Q8ZY48 as seed ortholog is 100%.

Group of orthologs #2. Best score 709 bits
Score difference with first non-orthologous sequence - C.neoformans:31 P.aerophilum:709

Q5KC33              	100.00%		Q8ZYQ9              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 45%.
Alternative seed ortholog is Q5KIB7 (31 bits away from this cluster)
Bootstrap support for Q8ZYQ9 as seed ortholog is 100%.

Group of orthologs #3. Best score 623 bits
Score difference with first non-orthologous sequence - C.neoformans:123 P.aerophilum:623

Q5KA71              	100.00%		Q8ZTN5              	100.00%
                    	       		Q8ZYN4              	35.36%
Bootstrap support for Q5KA71 as seed ortholog is 99%.
Bootstrap support for Q8ZTN5 as seed ortholog is 100%.

Group of orthologs #4. Best score 607 bits
Score difference with first non-orthologous sequence - C.neoformans:154 P.aerophilum:607

Q5KFV9              	100.00%		Q8ZYQ8              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 99%.
Bootstrap support for Q8ZYQ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.aerophilum:236

Q5KN48              	100.00%		O93730              	100.00%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for O93730 as seed ortholog is 99%.

Group of orthologs #6. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:322 P.aerophilum:473

Q5KGV5              	100.00%		Q8ZYR1              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for Q8ZYR1 as seed ortholog is 100%.

Group of orthologs #7. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:346 P.aerophilum:470

Q5KBW0              	100.00%		Q8ZXR2              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for Q8ZXR2 as seed ortholog is 100%.

Group of orthologs #8. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.aerophilum:460

Q5KCL8              	100.00%		Q8ZYU6              	100.00%
Bootstrap support for Q5KCL8 as seed ortholog is 100%.
Bootstrap support for Q8ZYU6 as seed ortholog is 100%.

Group of orthologs #9. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:374 P.aerophilum:390

Q5KN88              	100.00%		Q8ZVC5              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for Q8ZVC5 as seed ortholog is 100%.

Group of orthologs #10. Best score 450 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.aerophilum:450

Q5KHJ9              	100.00%		Q8ZZC1              	100.00%
Q5KIQ1              	10.04%		
Bootstrap support for Q5KHJ9 as seed ortholog is 99%.
Bootstrap support for Q8ZZC1 as seed ortholog is 100%.

Group of orthologs #11. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.aerophilum:432

Q5KPM2              	100.00%		Q8ZWU4              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 99%.
Bootstrap support for Q8ZWU4 as seed ortholog is 100%.

Group of orthologs #12. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 P.aerophilum:428

Q5KLA1              	100.00%		Q8ZSY7              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for Q8ZSY7 as seed ortholog is 100%.

Group of orthologs #13. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.aerophilum:427

P0CN30              	100.00%		O93729              	100.00%
Bootstrap support for P0CN30 as seed ortholog is 99%.
Bootstrap support for O93729 as seed ortholog is 100%.

Group of orthologs #14. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 P.aerophilum:413

Q5K9E9              	100.00%		Q8ZT92              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for Q8ZT92 as seed ortholog is 100%.

Group of orthologs #15. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:299 P.aerophilum:408

Q5KBA0              	100.00%		Q8ZYM0              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for Q8ZYM0 as seed ortholog is 100%.

Group of orthologs #16. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.aerophilum:393

Q5K9H1              	100.00%		Q8ZVU7              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 76%.
Bootstrap support for Q8ZVU7 as seed ortholog is 100%.

Group of orthologs #17. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:32 P.aerophilum:389

Q5KQ47              	100.00%		Q8ZTF8              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 81%.
Bootstrap support for Q8ZTF8 as seed ortholog is 100%.

Group of orthologs #18. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.aerophilum:387

Q5KM82              	100.00%		Q8ZXI3              	100.00%
Bootstrap support for Q5KM82 as seed ortholog is 59%.
Alternative seed ortholog is Q5KD59 (59 bits away from this cluster)
Bootstrap support for Q8ZXI3 as seed ortholog is 100%.

Group of orthologs #19. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:293 P.aerophilum:380

Q5K7U0              	100.00%		Q8ZXT6              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for Q8ZXT6 as seed ortholog is 100%.

Group of orthologs #20. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.aerophilum:378

Q5K7N5              	100.00%		Q8ZY88              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 60%.
Alternative seed ortholog is Q5KFJ3 (11 bits away from this cluster)
Bootstrap support for Q8ZY88 as seed ortholog is 100%.

Group of orthologs #21. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.aerophilum:362

P0CR26              	100.00%		Q8ZWP0              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 63%.
Alternative seed ortholog is P0CR28 (16 bits away from this cluster)
Bootstrap support for Q8ZWP0 as seed ortholog is 100%.

Group of orthologs #22. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 P.aerophilum:359

Q5KB11              	100.00%		O93723              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for O93723 as seed ortholog is 100%.

Group of orthologs #23. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:181 P.aerophilum:343

Q5K722              	100.00%		Q8ZUJ0              	100.00%
Bootstrap support for Q5K722 as seed ortholog is 99%.
Bootstrap support for Q8ZUJ0 as seed ortholog is 100%.

Group of orthologs #24. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 P.aerophilum:333

Q5K9S3              	100.00%		Q8ZY71              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for Q8ZY71 as seed ortholog is 100%.

Group of orthologs #25. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 P.aerophilum:330

Q5KII0              	100.00%		Q8ZTZ0              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for Q8ZTZ0 as seed ortholog is 100%.

Group of orthologs #26. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 P.aerophilum:327

Q5KFS5              	100.00%		Q8ZVI3              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for Q8ZVI3 as seed ortholog is 100%.

Group of orthologs #27. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:7 P.aerophilum:326

Q5KBZ0              	100.00%		Q8ZV31              	100.00%
Q5KIV9              	27.84%		
Bootstrap support for Q5KBZ0 as seed ortholog is 42%.
Alternative seed ortholog is Q5KEX3 (7 bits away from this cluster)
Bootstrap support for Q8ZV31 as seed ortholog is 100%.

Group of orthologs #28. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.aerophilum:325

Q5KPJ5              	100.00%		Q8ZTD9              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 100%.
Bootstrap support for Q8ZTD9 as seed ortholog is 100%.

Group of orthologs #29. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:195 P.aerophilum:318

Q5KI46              	100.00%		Q8ZU56              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 99%.
Bootstrap support for Q8ZU56 as seed ortholog is 100%.

Group of orthologs #30. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 P.aerophilum:314

Q5KJ87              	100.00%		Q8ZTQ7              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for Q8ZTQ7 as seed ortholog is 100%.

Group of orthologs #31. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 P.aerophilum:310

Q5K9Z1              	100.00%		Q8ZUF0              	100.00%
Bootstrap support for Q5K9Z1 as seed ortholog is 100%.
Bootstrap support for Q8ZUF0 as seed ortholog is 100%.

Group of orthologs #32. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 P.aerophilum:309

Q5KKL2              	100.00%		Q8ZW11              	100.00%
Q5KG05              	55.66%		
Bootstrap support for Q5KKL2 as seed ortholog is 100%.
Bootstrap support for Q8ZW11 as seed ortholog is 100%.

Group of orthologs #33. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 P.aerophilum:286

Q5KJ46              	100.00%		Q8ZU97              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for Q8ZU97 as seed ortholog is 100%.

Group of orthologs #34. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:197 P.aerophilum:224

Q5KBB1              	100.00%		Q8ZWD4              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for Q8ZWD4 as seed ortholog is 99%.

Group of orthologs #35. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:203 P.aerophilum:278

Q5KLM1              	100.00%		Q8ZWJ4              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 99%.
Bootstrap support for Q8ZWJ4 as seed ortholog is 100%.

Group of orthologs #36. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.aerophilum:275

Q5KIW8              	100.00%		Q8ZZV4              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for Q8ZZV4 as seed ortholog is 100%.

Group of orthologs #37. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.aerophilum:152

Q5KH38              	100.00%		Q8ZU29              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 92%.
Bootstrap support for Q8ZU29 as seed ortholog is 99%.

Group of orthologs #38. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 P.aerophilum:262

Q5KE15              	100.00%		Q8ZVF2              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for Q8ZVF2 as seed ortholog is 100%.

Group of orthologs #39. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:212 P.aerophilum:262

Q5KLD7              	100.00%		Q8ZVQ9              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ9 as seed ortholog is 100%.

Group of orthologs #40. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:29 P.aerophilum:43

Q5KJV0              	100.00%		Q8ZXL3              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 79%.
Bootstrap support for Q8ZXL3 as seed ortholog is 87%.

Group of orthologs #41. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 P.aerophilum:259

P0CO58              	100.00%		Q8ZUR9              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for Q8ZUR9 as seed ortholog is 100%.

Group of orthologs #42. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.aerophilum:71

Q5KHN7              	100.00%		Q8ZUR5              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 99%.
Bootstrap support for Q8ZUR5 as seed ortholog is 91%.

Group of orthologs #43. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:29 P.aerophilum:255

Q5KP83              	100.00%		Q8ZUR7              	100.00%
Bootstrap support for Q5KP83 as seed ortholog is 81%.
Bootstrap support for Q8ZUR7 as seed ortholog is 100%.

Group of orthologs #44. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.aerophilum:41

Q5K707              	100.00%		Q8ZXA3              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 73%.
Alternative seed ortholog is Q5KP35 (25 bits away from this cluster)
Bootstrap support for Q8ZXA3 as seed ortholog is 86%.

Group of orthologs #45. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.aerophilum:251

Q5KHS3              	100.00%		Q8ZTP4              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 97%.
Bootstrap support for Q8ZTP4 as seed ortholog is 100%.

Group of orthologs #46. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.aerophilum:250

Q5KAU7              	100.00%		Q8ZTU5              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for Q8ZTU5 as seed ortholog is 100%.

Group of orthologs #47. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 P.aerophilum:164

Q5K9W1              	100.00%		Q8ZVV2              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for Q8ZVV2 as seed ortholog is 99%.

Group of orthologs #48. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.aerophilum:162

Q5K796              	100.00%		Q8ZYK4              	100.00%
                    	       		Q8ZWS2              	39.07%
Bootstrap support for Q5K796 as seed ortholog is 70%.
Alternative seed ortholog is Q5KCE8 (20 bits away from this cluster)
Bootstrap support for Q8ZYK4 as seed ortholog is 100%.

Group of orthologs #49. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 P.aerophilum:248

P0CS60              	100.00%		Q8ZYN2              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for Q8ZYN2 as seed ortholog is 100%.

Group of orthologs #50. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.aerophilum:145

Q5KNC3              	100.00%		Q8ZYR9              	100.00%
Q5K7N9              	11.49%		
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for Q8ZYR9 as seed ortholog is 99%.

Group of orthologs #51. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 P.aerophilum:247

Q5KKV6              	100.00%		Q8ZUK1              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for Q8ZUK1 as seed ortholog is 100%.

Group of orthologs #52. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.aerophilum:246

Q5KIH6              	100.00%		Q8ZYB3              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for Q8ZYB3 as seed ortholog is 100%.

Group of orthologs #53. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 P.aerophilum:246

Q5KN95              	100.00%		Q8ZVF3              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for Q8ZVF3 as seed ortholog is 100%.

Group of orthologs #54. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 P.aerophilum:244

Q5KGH1              	100.00%		Q8ZT95              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for Q8ZT95 as seed ortholog is 100%.

Group of orthologs #55. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 P.aerophilum:243

Q5KAU9              	100.00%		Q8ZU12              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for Q8ZU12 as seed ortholog is 100%.

Group of orthologs #56. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:121

Q5K705              	100.00%		Q8ZXA2              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 95%.
Bootstrap support for Q8ZXA2 as seed ortholog is 99%.

Group of orthologs #57. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.aerophilum:240

Q5KK08              	100.00%		Q8ZWG5              	100.00%
Q5KBZ2              	32.03%		
Bootstrap support for Q5KK08 as seed ortholog is 93%.
Bootstrap support for Q8ZWG5 as seed ortholog is 100%.

Group of orthologs #58. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.aerophilum:239

Q5KLI3              	100.00%		Q8ZW54              	100.00%
Bootstrap support for Q5KLI3 as seed ortholog is 98%.
Bootstrap support for Q8ZW54 as seed ortholog is 100%.

Group of orthologs #59. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.aerophilum:232

Q5KMF6              	100.00%		Q8ZVG2              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 90%.
Bootstrap support for Q8ZVG2 as seed ortholog is 100%.

Group of orthologs #60. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 P.aerophilum:229

Q5KP99              	100.00%		Q8ZYW5              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for Q8ZYW5 as seed ortholog is 100%.

Group of orthologs #61. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 P.aerophilum:226

Q5K6V0              	100.00%		Q8ZUL8              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for Q8ZUL8 as seed ortholog is 100%.

Group of orthologs #62. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 P.aerophilum:225

Q5KG06              	100.00%		Q8ZW10              	100.00%
Q5KKL0              	57.29%		
Q5KH79              	31.97%		
Bootstrap support for Q5KG06 as seed ortholog is 100%.
Bootstrap support for Q8ZW10 as seed ortholog is 100%.

Group of orthologs #63. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 P.aerophilum:223

Q5KIK6              	100.00%		Q8ZX30              	100.00%
Q5KE64              	49.78%		
Q5K7P0              	44.57%		
Bootstrap support for Q5KIK6 as seed ortholog is 100%.
Bootstrap support for Q8ZX30 as seed ortholog is 100%.

Group of orthologs #64. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 P.aerophilum:221

Q5K754              	100.00%		Q8ZXA8              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for Q8ZXA8 as seed ortholog is 100%.

Group of orthologs #65. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:88 P.aerophilum:107

Q5KHJ1              	100.00%		Q8ZYM8              	100.00%
Q5KEI6              	18.74%		
Bootstrap support for Q5KHJ1 as seed ortholog is 97%.
Bootstrap support for Q8ZYM8 as seed ortholog is 99%.

Group of orthologs #66. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.aerophilum:25

Q5KJD3              	100.00%		Q8ZW06              	100.00%
Bootstrap support for Q5KJD3 as seed ortholog is 90%.
Bootstrap support for Q8ZW06 as seed ortholog is 38%.
Alternative seed ortholog is Q8ZXH3 (25 bits away from this cluster)

Group of orthologs #67. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 P.aerophilum:219

Q5KF19              	100.00%		Q8ZV46              	100.00%
Bootstrap support for Q5KF19 as seed ortholog is 100%.
Bootstrap support for Q8ZV46 as seed ortholog is 100%.

Group of orthologs #68. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.aerophilum:215

P0CQ14              	100.00%		Q8ZV67              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 99%.
Bootstrap support for Q8ZV67 as seed ortholog is 100%.

Group of orthologs #69. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 P.aerophilum:211

Q5KPK7              	100.00%		Q8ZUA4              	100.00%
Bootstrap support for Q5KPK7 as seed ortholog is 100%.
Bootstrap support for Q8ZUA4 as seed ortholog is 100%.

Group of orthologs #70. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 P.aerophilum:210

Q5KA00              	100.00%		Q8ZTI9              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for Q8ZTI9 as seed ortholog is 100%.

Group of orthologs #71. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 P.aerophilum:209

Q5KCY4              	100.00%		Q8ZW90              	100.00%
Bootstrap support for Q5KCY4 as seed ortholog is 100%.
Bootstrap support for Q8ZW90 as seed ortholog is 100%.

Group of orthologs #72. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:24 P.aerophilum:209

Q5KMP3              	100.00%		Q8ZUR6              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 70%.
Alternative seed ortholog is Q5KIM3 (24 bits away from this cluster)
Bootstrap support for Q8ZUR6 as seed ortholog is 100%.

Group of orthologs #73. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 P.aerophilum:208

Q5KLA7              	100.00%		Q8ZYE7              	100.00%
Q5KG11              	38.47%		
Bootstrap support for Q5KLA7 as seed ortholog is 100%.
Bootstrap support for Q8ZYE7 as seed ortholog is 100%.

Group of orthologs #74. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.aerophilum:208

Q5K9M8              	100.00%		Q8ZVF0              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 98%.
Bootstrap support for Q8ZVF0 as seed ortholog is 100%.

Group of orthologs #75. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 P.aerophilum:206

Q5KJ10              	100.00%		Q8ZY49              	100.00%
Bootstrap support for Q5KJ10 as seed ortholog is 100%.
Bootstrap support for Q8ZY49 as seed ortholog is 100%.

Group of orthologs #76. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 P.aerophilum:202

Q5KCZ2              	100.00%		Q8ZWW9              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for Q8ZWW9 as seed ortholog is 100%.

Group of orthologs #77. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 P.aerophilum:199

Q5KAB8              	100.00%		Q8ZX61              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for Q8ZX61 as seed ortholog is 100%.

Group of orthologs #78. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.aerophilum:194

Q5K8Z3              	100.00%		Q8ZYF5              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for Q8ZYF5 as seed ortholog is 100%.

Group of orthologs #79. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 P.aerophilum:194

Q5KFA0              	100.00%		Q8ZTE1              	100.00%
Bootstrap support for Q5KFA0 as seed ortholog is 100%.
Bootstrap support for Q8ZTE1 as seed ortholog is 100%.

Group of orthologs #80. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:10 P.aerophilum:194

Q5KIV1              	100.00%		Q8ZVM1              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 63%.
Alternative seed ortholog is Q5KCK7 (10 bits away from this cluster)
Bootstrap support for Q8ZVM1 as seed ortholog is 100%.

Group of orthologs #81. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.aerophilum:192

Q5KC69              	100.00%		Q8ZT51              	100.00%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for Q8ZT51 as seed ortholog is 100%.

Group of orthologs #82. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 P.aerophilum:192

Q5KMQ2              	100.00%		Q8ZYD8              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for Q8ZYD8 as seed ortholog is 100%.

Group of orthologs #83. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 P.aerophilum:190

P0CM02              	100.00%		Q8ZW41              	100.00%
Bootstrap support for P0CM02 as seed ortholog is 100%.
Bootstrap support for Q8ZW41 as seed ortholog is 100%.

Group of orthologs #84. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.aerophilum:188

Q5KNM0              	100.00%		Q8ZV07              	100.00%
Bootstrap support for Q5KNM0 as seed ortholog is 36%.
Alternative seed ortholog is Q5K8Q2 (11 bits away from this cluster)
Bootstrap support for Q8ZV07 as seed ortholog is 100%.

Group of orthologs #85. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.aerophilum:186

P0CP26              	100.00%		Q8ZTI8              	100.00%
Q5KGK2              	16.52%		
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for Q8ZTI8 as seed ortholog is 100%.

Group of orthologs #86. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 P.aerophilum:186

Q5KF97              	100.00%		Q8ZSV6              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for Q8ZSV6 as seed ortholog is 100%.

Group of orthologs #87. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 P.aerophilum:184

Q5K947              	100.00%		Q8ZYK5              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for Q8ZYK5 as seed ortholog is 100%.

Group of orthologs #88. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.aerophilum:183

P0CM88              	100.00%		Q8ZYD9              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for Q8ZYD9 as seed ortholog is 100%.

Group of orthologs #89. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 P.aerophilum:183

Q5KEV1              	100.00%		Q8ZXN9              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for Q8ZXN9 as seed ortholog is 100%.

Group of orthologs #90. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 P.aerophilum:178

Q5K9E3              	100.00%		Q8ZW52              	100.00%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for Q8ZW52 as seed ortholog is 100%.

Group of orthologs #91. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:6 P.aerophilum:15

Q5KI84              	100.00%		Q8ZW34              	100.00%
Bootstrap support for Q5KI84 as seed ortholog is 55%.
Alternative seed ortholog is Q5KBZ1 (6 bits away from this cluster)
Bootstrap support for Q8ZW34 as seed ortholog is 62%.
Alternative seed ortholog is Q8ZWR8 (15 bits away from this cluster)

Group of orthologs #92. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 P.aerophilum:177

Q5KKG6              	100.00%		Q8ZYE0              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for Q8ZYE0 as seed ortholog is 100%.

Group of orthologs #93. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 P.aerophilum:176

Q5KPU2              	100.00%		Q8ZTB2              	100.00%
Bootstrap support for Q5KPU2 as seed ortholog is 100%.
Bootstrap support for Q8ZTB2 as seed ortholog is 100%.

Group of orthologs #94. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.aerophilum:175

Q5KFM3              	100.00%		Q8ZUK0              	100.00%
                    	       		Q8ZWL7              	8.92%
Bootstrap support for Q5KFM3 as seed ortholog is 100%.
Bootstrap support for Q8ZUK0 as seed ortholog is 100%.

Group of orthologs #95. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 P.aerophilum:175

Q5KAU8              	100.00%		Q8ZYF9              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for Q8ZYF9 as seed ortholog is 100%.

Group of orthologs #96. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.aerophilum:173

Q5KL32              	100.00%		Q8ZT48              	100.00%
                    	       		Q8ZW33              	75.37%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for Q8ZT48 as seed ortholog is 100%.

Group of orthologs #97. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.aerophilum:173

Q5KFZ4              	100.00%		Q8ZU33              	100.00%
Bootstrap support for Q5KFZ4 as seed ortholog is 100%.
Bootstrap support for Q8ZU33 as seed ortholog is 100%.

Group of orthologs #98. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 P.aerophilum:173

Q5KGK1              	100.00%		Q8ZTP7              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for Q8ZTP7 as seed ortholog is 100%.

Group of orthologs #99. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:33 P.aerophilum:112

Q5KN70              	100.00%		Q8ZTC7              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 85%.
Bootstrap support for Q8ZTC7 as seed ortholog is 99%.

Group of orthologs #100. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.aerophilum:172

P0CN40              	100.00%		Q8ZYJ8              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for Q8ZYJ8 as seed ortholog is 100%.

Group of orthologs #101. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 P.aerophilum:172

Q5KAF2              	100.00%		Q8ZW51              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for Q8ZW51 as seed ortholog is 100%.

Group of orthologs #102. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:93 P.aerophilum:23

Q5KIZ5              	100.00%		Q8ZW39              	100.00%
                    	       		Q8ZW35              	15.99%
Bootstrap support for Q5KIZ5 as seed ortholog is 99%.
Bootstrap support for Q8ZW39 as seed ortholog is 66%.
Alternative seed ortholog is Q8ZXD7 (23 bits away from this cluster)

Group of orthologs #103. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.aerophilum:170

P0CO88              	100.00%		Q8ZYG3              	100.00%
P0CO90              	11.31%		
Bootstrap support for P0CO88 as seed ortholog is 93%.
Bootstrap support for Q8ZYG3 as seed ortholog is 100%.

Group of orthologs #104. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 P.aerophilum:167

Q5KBS3              	100.00%		O93724              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for O93724 as seed ortholog is 100%.

Group of orthologs #105. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 P.aerophilum:166

Q5KDD6              	100.00%		Q8ZYQ4              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ4 as seed ortholog is 100%.

Group of orthologs #106. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 P.aerophilum:113

Q5KK45              	100.00%		Q8ZW40              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for Q8ZW40 as seed ortholog is 99%.

Group of orthologs #107. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 P.aerophilum:163

Q5KBF6              	100.00%		Q8ZY90              	100.00%
Q5KHW3              	17.73%		
Bootstrap support for Q5KBF6 as seed ortholog is 100%.
Bootstrap support for Q8ZY90 as seed ortholog is 100%.

Group of orthologs #108. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:53 P.aerophilum:160

Q5KFP5              	100.00%		Q8ZYW1              	100.00%
Bootstrap support for Q5KFP5 as seed ortholog is 92%.
Bootstrap support for Q8ZYW1 as seed ortholog is 100%.

Group of orthologs #109. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 P.aerophilum:159

Q5KN34              	100.00%		Q8ZV45              	100.00%
Bootstrap support for Q5KN34 as seed ortholog is 100%.
Bootstrap support for Q8ZV45 as seed ortholog is 100%.

Group of orthologs #110. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:34 P.aerophilum:158

Q5KGR5              	100.00%		Q8ZUR8              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 81%.
Bootstrap support for Q8ZUR8 as seed ortholog is 100%.

Group of orthologs #111. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 P.aerophilum:158

Q5KJR9              	100.00%		Q8ZU81              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for Q8ZU81 as seed ortholog is 100%.

Group of orthologs #112. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:9 P.aerophilum:112

Q5KKJ8              	100.00%		Q8ZXX8              	100.00%
Bootstrap support for Q5KKJ8 as seed ortholog is 56%.
Alternative seed ortholog is Q5KKI9 (9 bits away from this cluster)
Bootstrap support for Q8ZXX8 as seed ortholog is 99%.

Group of orthologs #113. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.aerophilum:151

Q5KE01              	100.00%		Q8ZWK6              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for Q8ZWK6 as seed ortholog is 100%.

Group of orthologs #114. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 P.aerophilum:151

Q5KK33              	100.00%		Q8ZU95              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for Q8ZU95 as seed ortholog is 100%.

Group of orthologs #115. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:13 P.aerophilum:70

Q5K976              	100.00%		Q8ZU65              	100.00%
                    	       		Q8ZTH7              	6.37%
                    	       		Q8ZXA1              	6.18%
Bootstrap support for Q5K976 as seed ortholog is 60%.
Alternative seed ortholog is Q5K978 (13 bits away from this cluster)
Bootstrap support for Q8ZU65 as seed ortholog is 96%.

Group of orthologs #116. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.aerophilum:149

Q5KNA0              	100.00%		Q8ZY16              	100.00%
Bootstrap support for Q5KNA0 as seed ortholog is 99%.
Bootstrap support for Q8ZY16 as seed ortholog is 100%.

Group of orthologs #117. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 P.aerophilum:148

P0CS70              	100.00%		Q8ZVG4              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for Q8ZVG4 as seed ortholog is 100%.

Group of orthologs #118. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.aerophilum:33

P0CO20              	100.00%		Q8ZSW5              	100.00%
Q5KDW3              	11.71%		
Bootstrap support for P0CO20 as seed ortholog is 98%.
Bootstrap support for Q8ZSW5 as seed ortholog is 80%.

Group of orthologs #119. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 P.aerophilum:146

Q5KA97              	100.00%		Q8ZT09              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for Q8ZT09 as seed ortholog is 100%.

Group of orthologs #120. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.aerophilum:145

P0CN60              	100.00%		Q8ZYL5              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for Q8ZYL5 as seed ortholog is 100%.

Group of orthologs #121. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 P.aerophilum:145

Q5KDC5              	100.00%		Q8ZXH9              	100.00%
Bootstrap support for Q5KDC5 as seed ortholog is 100%.
Bootstrap support for Q8ZXH9 as seed ortholog is 100%.

Group of orthologs #122. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 P.aerophilum:144

Q5KK07              	100.00%		Q8ZZJ6              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ6 as seed ortholog is 100%.

Group of orthologs #123. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 P.aerophilum:143

Q5K6Y9              	100.00%		Q8ZV75              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for Q8ZV75 as seed ortholog is 100%.

Group of orthologs #124. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:15 P.aerophilum:143

Q5KJF0              	100.00%		Q8ZUN9              	100.00%
Bootstrap support for Q5KJF0 as seed ortholog is 68%.
Alternative seed ortholog is Q5KAM1 (15 bits away from this cluster)
Bootstrap support for Q8ZUN9 as seed ortholog is 100%.

Group of orthologs #125. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.aerophilum:142

Q5KDR3              	100.00%		Q8ZY28              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for Q8ZY28 as seed ortholog is 100%.

Group of orthologs #126. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 P.aerophilum:142

Q5KNR0              	100.00%		Q8ZX20              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for Q8ZX20 as seed ortholog is 100%.

Group of orthologs #127. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 P.aerophilum:141

Q5K9I8              	100.00%		Q8ZUR1              	100.00%
Bootstrap support for Q5K9I8 as seed ortholog is 100%.
Bootstrap support for Q8ZUR1 as seed ortholog is 100%.

Group of orthologs #128. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.aerophilum:141

Q5KFI9              	100.00%		Q8ZVF1              	100.00%
Bootstrap support for Q5KFI9 as seed ortholog is 99%.
Bootstrap support for Q8ZVF1 as seed ortholog is 100%.

Group of orthologs #129. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 P.aerophilum:140

Q5KCI0              	100.00%		Q8ZVR0              	100.00%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for Q8ZVR0 as seed ortholog is 100%.

Group of orthologs #130. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.aerophilum:140

Q5KPC4              	100.00%		Q8ZV32              	100.00%
Bootstrap support for Q5KPC4 as seed ortholog is 98%.
Bootstrap support for Q8ZV32 as seed ortholog is 100%.

Group of orthologs #131. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 P.aerophilum:139

Q5KFT0              	100.00%		Q8ZTM9              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for Q8ZTM9 as seed ortholog is 100%.

Group of orthologs #132. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.aerophilum:138

Q5KLY2              	100.00%		Q8ZXN7              	100.00%
P0CN76              	48.19%		
Bootstrap support for Q5KLY2 as seed ortholog is 100%.
Bootstrap support for Q8ZXN7 as seed ortholog is 100%.

Group of orthologs #133. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.aerophilum:51

Q5K8J3              	100.00%		Q8ZT41              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for Q8ZT41 as seed ortholog is 88%.

Group of orthologs #134. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 P.aerophilum:138

Q5KLQ8              	100.00%		Q8ZU26              	100.00%
Bootstrap support for Q5KLQ8 as seed ortholog is 100%.
Bootstrap support for Q8ZU26 as seed ortholog is 100%.

Group of orthologs #135. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.aerophilum:136

Q5K7B4              	100.00%		Q8ZZK4              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for Q8ZZK4 as seed ortholog is 100%.

Group of orthologs #136. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.aerophilum:136

Q5KGP7              	100.00%		Q8ZU66              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for Q8ZU66 as seed ortholog is 100%.

Group of orthologs #137. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 P.aerophilum:136

Q5KK78              	100.00%		Q8ZTS7              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for Q8ZTS7 as seed ortholog is 100%.

Group of orthologs #138. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.aerophilum:134

Q5KF32              	100.00%		Q8ZWS0              	100.00%
Q5KKJ5              	39.29%		
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for Q8ZWS0 as seed ortholog is 100%.

Group of orthologs #139. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 P.aerophilum:134

Q5KB97              	100.00%		Q8ZZJ7              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ7 as seed ortholog is 100%.

Group of orthologs #140. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 P.aerophilum:132

Q5KEL1              	100.00%		Q8ZUZ4              	100.00%
Bootstrap support for Q5KEL1 as seed ortholog is 100%.
Bootstrap support for Q8ZUZ4 as seed ortholog is 100%.

Group of orthologs #141. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.aerophilum:131

Q5KA19              	100.00%		Q8ZSU7              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for Q8ZSU7 as seed ortholog is 100%.

Group of orthologs #142. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 P.aerophilum:131

P0CQ34              	100.00%		Q8ZY26              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for Q8ZY26 as seed ortholog is 100%.

Group of orthologs #143. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.aerophilum:131

P0CQ56              	100.00%		Q8ZYE2              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 99%.
Bootstrap support for Q8ZYE2 as seed ortholog is 100%.

Group of orthologs #144. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:26 P.aerophilum:131

Q5KES1              	100.00%		Q8ZVE1              	100.00%
Bootstrap support for Q5KES1 as seed ortholog is 70%.
Alternative seed ortholog is Q5KAK7 (26 bits away from this cluster)
Bootstrap support for Q8ZVE1 as seed ortholog is 100%.

Group of orthologs #145. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.aerophilum:129

Q5KND5              	100.00%		Q8ZT45              	100.00%
                    	       		Q8ZUY0              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 90%.
Bootstrap support for Q8ZT45 as seed ortholog is 100%.
Bootstrap support for Q8ZUY0 as seed ortholog is 100%.

Group of orthologs #146. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.aerophilum:129

P0CQ36              	100.00%		Q8ZZJ2              	100.00%
Bootstrap support for P0CQ36 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ2 as seed ortholog is 100%.

Group of orthologs #147. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.aerophilum:129

Q5KEL8              	100.00%		Q8ZYY6              	100.00%
Bootstrap support for Q5KEL8 as seed ortholog is 100%.
Bootstrap support for Q8ZYY6 as seed ortholog is 100%.

Group of orthologs #148. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 P.aerophilum:129

Q5KQ20              	100.00%		Q8ZWT5              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for Q8ZWT5 as seed ortholog is 100%.

Group of orthologs #149. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.aerophilum:128

P0CM24              	100.00%		Q8ZX71              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for Q8ZX71 as seed ortholog is 100%.

Group of orthologs #150. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.aerophilum:128

Q5KAX6              	100.00%		Q8ZTJ4              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ4 as seed ortholog is 100%.

Group of orthologs #151. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.aerophilum:128

Q5KIJ0              	100.00%		Q8ZT11              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for Q8ZT11 as seed ortholog is 100%.

Group of orthologs #152. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 P.aerophilum:128

Q5KJI8              	100.00%		Q8ZWZ1              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for Q8ZWZ1 as seed ortholog is 100%.

Group of orthologs #153. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:26 P.aerophilum:80

Q5K9Z8              	100.00%		Q8ZVW7              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 81%.
Bootstrap support for Q8ZVW7 as seed ortholog is 99%.

Group of orthologs #154. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 P.aerophilum:127

Q5KMA6              	100.00%		Q8ZSV4              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for Q8ZSV4 as seed ortholog is 100%.

Group of orthologs #155. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.aerophilum:126

Q5K979              	100.00%		Q8ZVW0              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for Q8ZVW0 as seed ortholog is 100%.

Group of orthologs #156. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 P.aerophilum:126

Q5KNK2              	100.00%		Q8ZTD3              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for Q8ZTD3 as seed ortholog is 100%.

Group of orthologs #157. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 P.aerophilum:125

Q5KJU2              	100.00%		Q8ZVV7              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for Q8ZVV7 as seed ortholog is 100%.

Group of orthologs #158. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 P.aerophilum:124

P0CN04              	100.00%		Q8ZUU0              	100.00%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for Q8ZUU0 as seed ortholog is 100%.

Group of orthologs #159. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.aerophilum:79

Q5KQ79              	100.00%		Q8ZVJ5              	100.00%
Bootstrap support for Q5KQ79 as seed ortholog is 74%.
Alternative seed ortholog is Q5KCP9 (27 bits away from this cluster)
Bootstrap support for Q8ZVJ5 as seed ortholog is 99%.

Group of orthologs #160. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:2 P.aerophilum:123

Q5KAN3              	100.00%		Q8ZU64              	100.00%
Q5KPZ2              	15.54%		
Q5KPJ4              	13.50%		
Q5KEL5              	9.89%		
Q5KD15              	9.73%		
Q5K981              	9.73%		
Q5KJG0              	5.81%		
Bootstrap support for Q5KAN3 as seed ortholog is 52%.
Alternative seed ortholog is Q5K7P9 (2 bits away from this cluster)
Bootstrap support for Q8ZU64 as seed ortholog is 100%.

Group of orthologs #161. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:9 P.aerophilum:21

Q5KEG5              	100.00%		Q8ZVD9              	100.00%
Q5KHA5              	64.80%		Q8ZW83              	7.57%
Bootstrap support for Q5KEG5 as seed ortholog is 41%.
Alternative seed ortholog is Q5KJK1 (9 bits away from this cluster)
Bootstrap support for Q8ZVD9 as seed ortholog is 68%.
Alternative seed ortholog is Q8ZVZ5 (21 bits away from this cluster)

Group of orthologs #162. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.aerophilum:121

Q5KD48              	100.00%		Q8ZWB6              	100.00%
                    	       		Q8ZWM5              	7.51%
Bootstrap support for Q5KD48 as seed ortholog is 100%.
Bootstrap support for Q8ZWB6 as seed ortholog is 100%.

Group of orthologs #163. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.aerophilum:121

Q5K959              	100.00%		Q8ZTR0              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 99%.
Bootstrap support for Q8ZTR0 as seed ortholog is 100%.

Group of orthologs #164. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.aerophilum:121

Q5KHU0              	100.00%		Q8ZVM9              	100.00%
Bootstrap support for Q5KHU0 as seed ortholog is 77%.
Bootstrap support for Q8ZVM9 as seed ortholog is 100%.

Group of orthologs #165. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 P.aerophilum:121

Q5KKT0              	100.00%		Q8ZYP5              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for Q8ZYP5 as seed ortholog is 100%.

Group of orthologs #166. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.aerophilum:120

Q5KDT3              	100.00%		Q8ZVU8              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 95%.
Bootstrap support for Q8ZVU8 as seed ortholog is 100%.

Group of orthologs #167. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.aerophilum:120

Q5KDM0              	100.00%		Q8ZYL9              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for Q8ZYL9 as seed ortholog is 100%.

Group of orthologs #168. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:31 P.aerophilum:120

Q5KLF1              	100.00%		Q8ZU06              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 93%.
Bootstrap support for Q8ZU06 as seed ortholog is 100%.

Group of orthologs #169. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 P.aerophilum:120

Q5KKX9              	100.00%		Q8ZYI4              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 100%.
Bootstrap support for Q8ZYI4 as seed ortholog is 100%.

Group of orthologs #170. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:22 P.aerophilum:118

Q5KHZ2              	100.00%		Q8ZTB6              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 75%.
Bootstrap support for Q8ZTB6 as seed ortholog is 100%.

Group of orthologs #171. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.aerophilum:71

Q5K955              	100.00%		Q8ZUT5              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for Q8ZUT5 as seed ortholog is 94%.

Group of orthologs #172. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 P.aerophilum:117

Q5KIW5              	100.00%		Q8ZY36              	100.00%
Bootstrap support for Q5KIW5 as seed ortholog is 100%.
Bootstrap support for Q8ZY36 as seed ortholog is 100%.

Group of orthologs #173. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.aerophilum:114

Q5K8Z0              	100.00%		Q8ZYJ0              	100.00%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for Q8ZYJ0 as seed ortholog is 100%.

Group of orthologs #174. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 P.aerophilum:114

Q5KJN6              	100.00%		Q8ZZZ4              	100.00%
Bootstrap support for Q5KJN6 as seed ortholog is 100%.
Bootstrap support for Q8ZZZ4 as seed ortholog is 100%.

Group of orthologs #175. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:28 P.aerophilum:113

Q5KJE4              	100.00%		Q8ZT99              	100.00%
Q5KM14              	23.61%		
Q5KBU7              	20.30%		
Q5KF93              	10.90%		
Q5KFW3              	8.55%		
Q5KKE4              	8.33%		
Q5K986              	5.88%		
Q5KJ69              	5.13%		
Bootstrap support for Q5KJE4 as seed ortholog is 78%.
Bootstrap support for Q8ZT99 as seed ortholog is 100%.

Group of orthologs #176. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.aerophilum:113

Q5KHS2              	100.00%		Q8ZW26              	100.00%
Q5KP72              	50.09%		
Q5KGH3              	45.06%		
Q5KGM9              	39.17%		
Q5KME1              	26.69%		
Q5KMH1              	21.66%		
Bootstrap support for Q5KHS2 as seed ortholog is 100%.
Bootstrap support for Q8ZW26 as seed ortholog is 100%.

Group of orthologs #177. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.aerophilum:113

Q5KJD4              	100.00%		Q8ZWD8              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for Q8ZWD8 as seed ortholog is 100%.

Group of orthologs #178. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 P.aerophilum:113

Q5KP26              	100.00%		Q8ZYL2              	100.00%
Bootstrap support for Q5KP26 as seed ortholog is 100%.
Bootstrap support for Q8ZYL2 as seed ortholog is 100%.

Group of orthologs #179. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:16 P.aerophilum:112

F5HFW5              	100.00%		Q8ZW82              	100.00%
Bootstrap support for F5HFW5 as seed ortholog is 63%.
Alternative seed ortholog is Q5KNE6 (16 bits away from this cluster)
Bootstrap support for Q8ZW82 as seed ortholog is 100%.

Group of orthologs #180. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.aerophilum:17

Q5KIP0              	100.00%		Q8ZVW5              	100.00%
Q5KJ03              	13.58%		
Bootstrap support for Q5KIP0 as seed ortholog is 56%.
Alternative seed ortholog is Q5KLC5 (5 bits away from this cluster)
Bootstrap support for Q8ZVW5 as seed ortholog is 74%.
Alternative seed ortholog is Q8ZUD8 (17 bits away from this cluster)

Group of orthologs #181. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.aerophilum:111

Q5KNR6              	100.00%		Q8ZU14              	100.00%
Q5KLJ0              	5.67%		
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for Q8ZU14 as seed ortholog is 100%.

Group of orthologs #182. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.aerophilum:111

Q5KBP7              	100.00%		Q8ZTY7              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for Q8ZTY7 as seed ortholog is 100%.

Group of orthologs #183. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.aerophilum:111

Q5K844              	100.00%		Q8ZY04              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for Q8ZY04 as seed ortholog is 100%.

Group of orthologs #184. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 P.aerophilum:111

Q5KEX8              	100.00%		Q8ZWL4              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for Q8ZWL4 as seed ortholog is 100%.

Group of orthologs #185. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.aerophilum:108

P0CO22              	100.00%		Q8ZY15              	100.00%
Bootstrap support for P0CO22 as seed ortholog is 100%.
Bootstrap support for Q8ZY15 as seed ortholog is 100%.

Group of orthologs #186. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 P.aerophilum:37

Q5KM94              	100.00%		Q8ZWY9              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for Q8ZWY9 as seed ortholog is 85%.

Group of orthologs #187. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:27 P.aerophilum:107

Q5KDE0              	100.00%		Q8ZU41              	100.00%
Q5KA61              	7.46%		Q8ZT00              	26.47%
Bootstrap support for Q5KDE0 as seed ortholog is 73%.
Alternative seed ortholog is Q5KPC9 (27 bits away from this cluster)
Bootstrap support for Q8ZU41 as seed ortholog is 100%.

Group of orthologs #188. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.aerophilum:107

Q5KGX1              	100.00%		Q8ZWV9              	100.00%
Bootstrap support for Q5KGX1 as seed ortholog is 64%.
Alternative seed ortholog is Q5KGW5 (11 bits away from this cluster)
Bootstrap support for Q8ZWV9 as seed ortholog is 100%.

Group of orthologs #189. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 P.aerophilum:106

Q5KGR6              	100.00%		Q8ZWY4              	100.00%
Q5KAX0              	21.63%		
Bootstrap support for Q5KGR6 as seed ortholog is 100%.
Bootstrap support for Q8ZWY4 as seed ortholog is 100%.

Group of orthologs #190. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.aerophilum:106

Q5KKS4              	100.00%		Q8ZVN0              	100.00%
Bootstrap support for Q5KKS4 as seed ortholog is 56%.
Alternative seed ortholog is Q5KMZ6 (5 bits away from this cluster)
Bootstrap support for Q8ZVN0 as seed ortholog is 100%.

Group of orthologs #191. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.aerophilum:103

Q5KLW1              	100.00%		Q8ZUW4              	100.00%
Bootstrap support for Q5KLW1 as seed ortholog is 100%.
Bootstrap support for Q8ZUW4 as seed ortholog is 100%.

Group of orthologs #192. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 P.aerophilum:103

Q5KK90              	100.00%		Q8ZWQ7              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for Q8ZWQ7 as seed ortholog is 100%.

Group of orthologs #193. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.aerophilum:102

Q5KG21              	100.00%		Q8ZVG1              	100.00%
Q5KAW6              	17.02%		
P0CQ84              	11.07%		
P0CQ76              	10.06%		
P0CQ74              	10.06%		
P0CR00              	7.78%		
P0CQ78              	7.14%		
P0CR02              	6.77%		
P0CQ80              	6.68%		
P0CQ70              	5.03%		
Bootstrap support for Q5KG21 as seed ortholog is 100%.
Bootstrap support for Q8ZVG1 as seed ortholog is 100%.

Group of orthologs #194. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.aerophilum:102

Q5KGZ2              	100.00%		Q8ZX10              	100.00%
Q5K6W3              	25.15%		
Q5K7J8              	14.44%		
Bootstrap support for Q5KGZ2 as seed ortholog is 100%.
Bootstrap support for Q8ZX10 as seed ortholog is 100%.

Group of orthologs #195. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:46 P.aerophilum:102

Q5KGW0              	100.00%		Q8ZTV1              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 97%.
Bootstrap support for Q8ZTV1 as seed ortholog is 100%.

Group of orthologs #196. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 P.aerophilum:102

Q5KJ01              	100.00%		Q8ZXW7              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for Q8ZXW7 as seed ortholog is 100%.

Group of orthologs #197. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.aerophilum:4

Q5KC09              	100.00%		Q8ZV43              	100.00%
Q5KL60              	9.75%		
Bootstrap support for Q5KC09 as seed ortholog is 74%.
Alternative seed ortholog is Q5KKF0 (23 bits away from this cluster)
Bootstrap support for Q8ZV43 as seed ortholog is 55%.
Alternative seed ortholog is Q8ZVD8 (4 bits away from this cluster)

Group of orthologs #198. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.aerophilum:101

Q5KDX8              	100.00%		Q8ZU24              	100.00%
Q5KCA3              	39.48%		
Bootstrap support for Q5KDX8 as seed ortholog is 100%.
Bootstrap support for Q8ZU24 as seed ortholog is 100%.

Group of orthologs #199. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.aerophilum:101

P0CQ58              	100.00%		Q8ZT21              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for Q8ZT21 as seed ortholog is 100%.

Group of orthologs #200. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.aerophilum:101

Q5K9F7              	100.00%		Q8ZST9              	100.00%
Bootstrap support for Q5K9F7 as seed ortholog is 100%.
Bootstrap support for Q8ZST9 as seed ortholog is 100%.

Group of orthologs #201. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.aerophilum:101

Q5KEJ6              	100.00%		Q8ZTT3              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 90%.
Bootstrap support for Q8ZTT3 as seed ortholog is 100%.

Group of orthologs #202. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 P.aerophilum:101

Q5KIC1              	100.00%		Q8ZVI7              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for Q8ZVI7 as seed ortholog is 100%.

Group of orthologs #203. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.aerophilum:40

Q5KG23              	100.00%		Q8ZYH6              	100.00%
Bootstrap support for Q5KG23 as seed ortholog is 97%.
Bootstrap support for Q8ZYH6 as seed ortholog is 95%.

Group of orthologs #204. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.aerophilum:100

Q5KA46              	100.00%		Q8ZTV0              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for Q8ZTV0 as seed ortholog is 100%.

Group of orthologs #205. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.aerophilum:100

Q5KH61              	100.00%		Q8ZYE1              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for Q8ZYE1 as seed ortholog is 100%.

Group of orthologs #206. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 P.aerophilum:100

Q5KM68              	100.00%		Q8ZYQ0              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ0 as seed ortholog is 100%.

Group of orthologs #207. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.aerophilum:99

Q5K808              	100.00%		Q8ZXN6              	100.00%
Q5KLR5              	38.12%		
Bootstrap support for Q5K808 as seed ortholog is 100%.
Bootstrap support for Q8ZXN6 as seed ortholog is 100%.

Group of orthologs #208. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.aerophilum:12

Q5KM46              	100.00%		Q8ZY38              	100.00%
Bootstrap support for Q5KM46 as seed ortholog is 100%.
Bootstrap support for Q8ZY38 as seed ortholog is 60%.
Alternative seed ortholog is Q8ZY73 (12 bits away from this cluster)

Group of orthologs #209. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 P.aerophilum:99

Q5KQ70              	100.00%		Q8ZVA7              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for Q8ZVA7 as seed ortholog is 100%.

Group of orthologs #210. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 P.aerophilum:97

Q5KAS7              	100.00%		Q8ZTU1              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for Q8ZTU1 as seed ortholog is 100%.

Group of orthologs #211. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.aerophilum:96

Q5KQ45              	100.00%		Q8ZWP2              	100.00%
                    	       		Q8ZSU1              	14.40%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for Q8ZWP2 as seed ortholog is 100%.

Group of orthologs #212. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.aerophilum:96

Q5K8F7              	100.00%		Q8ZUE2              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for Q8ZUE2 as seed ortholog is 100%.

Group of orthologs #213. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.aerophilum:96

Q5KE92              	100.00%		Q8ZTA8              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for Q8ZTA8 as seed ortholog is 100%.

Group of orthologs #214. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:25 P.aerophilum:96

Q5KIG6              	100.00%		Q8ZYQ3              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 74%.
Alternative seed ortholog is Q5KG24 (25 bits away from this cluster)
Bootstrap support for Q8ZYQ3 as seed ortholog is 100%.

Group of orthologs #215. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 P.aerophilum:96

Q5KM24              	100.00%		Q8ZYN0              	100.00%
Bootstrap support for Q5KM24 as seed ortholog is 100%.
Bootstrap support for Q8ZYN0 as seed ortholog is 100%.

Group of orthologs #216. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 P.aerophilum:95

Q5KBD4              	100.00%		Q8ZZX3              	100.00%
Bootstrap support for Q5KBD4 as seed ortholog is 100%.
Bootstrap support for Q8ZZX3 as seed ortholog is 100%.

Group of orthologs #217. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.aerophilum:27

Q5KJU9              	100.00%		Q8ZVX6              	100.00%
Bootstrap support for Q5KJU9 as seed ortholog is 84%.
Bootstrap support for Q8ZVX6 as seed ortholog is 85%.

Group of orthologs #218. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:8 P.aerophilum:94

Q5KFD9              	100.00%		Q8ZST5              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 56%.
Alternative seed ortholog is Q5KCK7 (8 bits away from this cluster)
Bootstrap support for Q8ZST5 as seed ortholog is 100%.

Group of orthologs #219. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 P.aerophilum:94

Q5KPF3              	100.00%		Q8ZVB5              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for Q8ZVB5 as seed ortholog is 100%.

Group of orthologs #220. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:5 P.aerophilum:93

Q5KCD4              	100.00%		Q8ZUM0              	100.00%
Bootstrap support for Q5KCD4 as seed ortholog is 84%.
Bootstrap support for Q8ZUM0 as seed ortholog is 100%.

Group of orthologs #221. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:11 P.aerophilum:93

Q5KKC2              	100.00%		Q8ZYF2              	100.00%
Bootstrap support for Q5KKC2 as seed ortholog is 62%.
Alternative seed ortholog is Q5KCK7 (11 bits away from this cluster)
Bootstrap support for Q8ZYF2 as seed ortholog is 100%.

Group of orthologs #222. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.aerophilum:92

Q5KDP4              	100.00%		Q8ZST4              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for Q8ZST4 as seed ortholog is 100%.

Group of orthologs #223. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 P.aerophilum:92

Q5KFF3              	100.00%		Q8ZWS3              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for Q8ZWS3 as seed ortholog is 100%.

Group of orthologs #224. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 P.aerophilum:91

P0CR18              	100.00%		Q8ZXY8              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for Q8ZXY8 as seed ortholog is 100%.

Group of orthologs #225. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.aerophilum:90

P0CQ52              	100.00%		Q8ZTA5              	100.00%
Bootstrap support for P0CQ52 as seed ortholog is 100%.
Bootstrap support for Q8ZTA5 as seed ortholog is 100%.

Group of orthologs #226. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.aerophilum:90

Q5KCD7              	100.00%		Q8ZXT3              	100.00%
Bootstrap support for Q5KCD7 as seed ortholog is 100%.
Bootstrap support for Q8ZXT3 as seed ortholog is 100%.

Group of orthologs #227. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 P.aerophilum:90

Q5KJL6              	100.00%		Q8ZTX8              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for Q8ZTX8 as seed ortholog is 100%.

Group of orthologs #228. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 P.aerophilum:89

Q5KIC8              	100.00%		Q8ZU54              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for Q8ZU54 as seed ortholog is 100%.

Group of orthologs #229. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.aerophilum:87

Q5K9W6              	100.00%		Q8ZVM7              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for Q8ZVM7 as seed ortholog is 100%.

Group of orthologs #230. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 P.aerophilum:87

Q5KDD7              	100.00%		Q8ZT91              	100.00%
Bootstrap support for Q5KDD7 as seed ortholog is 100%.
Bootstrap support for Q8ZT91 as seed ortholog is 100%.

Group of orthologs #231. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 P.aerophilum:86

Q5KPZ1              	100.00%		Q8ZWI0              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for Q8ZWI0 as seed ortholog is 100%.

Group of orthologs #232. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 P.aerophilum:84

Q5KDR0              	100.00%		Q8ZVB2              	100.00%
Q5KDL9              	41.23%		
Bootstrap support for Q5KDR0 as seed ortholog is 100%.
Bootstrap support for Q8ZVB2 as seed ortholog is 100%.

Group of orthologs #233. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:33 P.aerophilum:84

Q5KBQ7              	100.00%		Q8ZXZ8              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 80%.
Bootstrap support for Q8ZXZ8 as seed ortholog is 100%.

Group of orthologs #234. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:36 P.aerophilum:83

Q5KM76              	100.00%		Q8ZZM4              	100.00%
Q5K7G0              	29.48%		
Q5K7D3              	21.39%		
Q5KE75              	18.21%		
Q5KLB7              	17.53%		
Q5KGQ4              	16.96%		
Q5K8W0              	16.76%		
Q5KCC5              	16.76%		
Q5KD28              	15.61%		
Q5KC79              	15.51%		
Q5K6S8              	15.41%		
Q5KKB7              	15.13%		
Q5KA16              	13.97%		
Q5KMZ2              	12.91%		
Q5K996              	12.24%		
Q5KKF1              	11.56%		
Q5KHG7              	10.60%		
Q5KE69              	9.83%		
Q5KAD4              	9.73%		
Q5KB77              	9.54%		
Q5KEM6              	8.57%		
Q5KKT2              	8.57%		
Q5KC74              	8.48%		
Q5KFT7              	8.48%		
Q5KFV2              	8.48%		
Q5KLH9              	8.29%		
Q5K806              	8.09%		
Q5KQ09              	8.00%		
Q5KCH2              	7.61%		
Q5KCB9              	7.61%		
Q5K7E3              	7.51%		
Q5KAD3              	7.42%		
Q5KGN5              	7.32%		
Q5KJA6              	6.84%		
Q5KLD0              	6.55%		
Q5KCB5              	6.36%		
Q5KJA2              	6.07%		
Q5KA14              	6.07%		
Q5KDS2              	5.97%		
Q5KFZ7              	5.59%		
Q5KD18              	5.59%		
Q5KD25              	5.59%		
Q5K9G5              	5.30%		
Q5K6W0              	5.20%		
Bootstrap support for Q5KM76 as seed ortholog is 57%.
Alternative seed ortholog is Q5KK79 (36 bits away from this cluster)
Bootstrap support for Q8ZZM4 as seed ortholog is 100%.

Group of orthologs #235. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 P.aerophilum:83

Q5KC51              	100.00%		Q8ZTY5              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for Q8ZTY5 as seed ortholog is 100%.

Group of orthologs #236. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:82

Q5KCS8              	100.00%		Q8ZU23              	100.00%
Q5KF65              	40.82%		
Q5KD72              	36.60%		
Q5KKR8              	33.48%		
Q5K8L3              	8.45%		
Bootstrap support for Q5KCS8 as seed ortholog is 100%.
Bootstrap support for Q8ZU23 as seed ortholog is 100%.

Group of orthologs #237. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:82

Q5KEA0              	100.00%		Q8ZWA8              	100.00%
Q5KE99              	43.68%		
Q5KJQ6              	10.49%		
Q5KAX9              	9.91%		
Q5K7H5              	8.92%		
Bootstrap support for Q5KEA0 as seed ortholog is 100%.
Bootstrap support for Q8ZWA8 as seed ortholog is 100%.

Group of orthologs #238. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:82

Q5K899              	100.00%		Q8ZTF3              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for Q8ZTF3 as seed ortholog is 100%.

Group of orthologs #239. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:82

Q5K9N0              	100.00%		Q8ZUE9              	100.00%
Bootstrap support for Q5K9N0 as seed ortholog is 100%.
Bootstrap support for Q8ZUE9 as seed ortholog is 100%.

Group of orthologs #240. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:82

Q5KAD9              	100.00%		Q8ZUB0              	100.00%
Bootstrap support for Q5KAD9 as seed ortholog is 100%.
Bootstrap support for Q8ZUB0 as seed ortholog is 100%.

Group of orthologs #241. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 P.aerophilum:82

Q5KLJ6              	100.00%		Q8ZTD4              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for Q8ZTD4 as seed ortholog is 100%.

Group of orthologs #242. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.aerophilum:81

Q5K7I5              	100.00%		Q8ZYQ1              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ1 as seed ortholog is 100%.

Group of orthologs #243. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.aerophilum:81

Q5KGE3              	100.00%		Q8ZTT4              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for Q8ZTT4 as seed ortholog is 100%.

Group of orthologs #244. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 P.aerophilum:26

Q5KLA4              	100.00%		Q8ZTP1              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for Q8ZTP1 as seed ortholog is 87%.

Group of orthologs #245. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.aerophilum:80

Q5KBW9              	100.00%		Q8ZVV8              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for Q8ZVV8 as seed ortholog is 100%.

Group of orthologs #246. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 P.aerophilum:80

Q5KBR9              	100.00%		Q8ZYM4              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for Q8ZYM4 as seed ortholog is 100%.

Group of orthologs #247. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.aerophilum:28

Q5K9Q9              	100.00%		Q8ZX91              	100.00%
                    	       		Q8ZVX1              	8.13%
                    	       		Q8ZVX2              	7.39%
                    	       		Q8ZXG4              	7.14%
                    	       		Q8ZTD0              	6.90%
                    	       		Q8ZX96              	6.40%
                    	       		Q8ZZD2              	5.67%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for Q8ZX91 as seed ortholog is 80%.

Group of orthologs #248. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 P.aerophilum:79

Q5KJI9              	100.00%		Q8ZUX8              	100.00%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for Q8ZUX8 as seed ortholog is 100%.

Group of orthologs #249. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.aerophilum:78

Q5K758              	100.00%		Q8ZWP3              	100.00%
Q5KEY3              	22.53%		
Q5KBK5              	18.37%		
Bootstrap support for Q5K758 as seed ortholog is 100%.
Bootstrap support for Q8ZWP3 as seed ortholog is 100%.

Group of orthologs #250. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.aerophilum:78

P0CS95              	100.00%		Q8ZTG3              	100.00%
Bootstrap support for P0CS95 as seed ortholog is 100%.
Bootstrap support for Q8ZTG3 as seed ortholog is 100%.

Group of orthologs #251. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 P.aerophilum:78

Q5K7J3              	100.00%		Q8ZVV9              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for Q8ZVV9 as seed ortholog is 100%.

Group of orthologs #252. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:35 P.aerophilum:78

Q5KQ17              	100.00%		Q8ZVM8              	100.00%
Bootstrap support for Q5KQ17 as seed ortholog is 87%.
Bootstrap support for Q8ZVM8 as seed ortholog is 100%.

Group of orthologs #253. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.aerophilum:76

Q5KLT3              	100.00%		Q8ZW13              	100.00%
Q5KPI8              	17.80%		Q8ZYT2              	12.21%
Bootstrap support for Q5KLT3 as seed ortholog is 100%.
Bootstrap support for Q8ZW13 as seed ortholog is 100%.

Group of orthologs #254. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.aerophilum:76

Q5KCW6              	100.00%		Q8ZV59              	100.00%
                    	       		Q8ZWU9              	11.86%
Bootstrap support for Q5KCW6 as seed ortholog is 100%.
Bootstrap support for Q8ZV59 as seed ortholog is 100%.

Group of orthologs #255. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 P.aerophilum:76

Q5KKY5              	100.00%		Q8ZU80              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for Q8ZU80 as seed ortholog is 100%.

Group of orthologs #256. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.aerophilum:76

Q5KLQ6              	100.00%		Q8ZYY0              	100.00%
Bootstrap support for Q5KLQ6 as seed ortholog is 64%.
Alternative seed ortholog is Q5K8E4 (23 bits away from this cluster)
Bootstrap support for Q8ZYY0 as seed ortholog is 100%.

Group of orthologs #257. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.aerophilum:75

Q5KBH4              	100.00%		Q8ZXL6              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for Q8ZXL6 as seed ortholog is 100%.

Group of orthologs #258. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 P.aerophilum:75

Q5KGT6              	100.00%		Q8ZYA5              	100.00%
Bootstrap support for Q5KGT6 as seed ortholog is 100%.
Bootstrap support for Q8ZYA5 as seed ortholog is 100%.

Group of orthologs #259. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.aerophilum:74

Q5K9G6              	100.00%		Q8ZWC4              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for Q8ZWC4 as seed ortholog is 100%.

Group of orthologs #260. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 P.aerophilum:74

Q5KPM8              	100.00%		Q8ZYQ6              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ6 as seed ortholog is 100%.

Group of orthologs #261. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 P.aerophilum:73

Q5KK13              	100.00%		Q8ZY35              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for Q8ZY35 as seed ortholog is 100%.

Group of orthologs #262. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.aerophilum:28

Q5KG59              	100.00%		Q8ZZC4              	100.00%
                    	       		Q8ZU93              	22.61%
                    	       		Q8ZZV5              	17.65%
                    	       		Q8ZXE6              	16.73%
                    	       		Q8ZXL2              	16.36%
                    	       		Q8ZXW3              	15.26%
                    	       		Q8ZW29              	14.89%
                    	       		Q8ZVH0              	12.68%
                    	       		Q8ZTD1              	10.29%
                    	       		Q8ZUH3              	9.74%
                    	       		Q8ZXG5              	9.56%
                    	       		Q8ZX95              	9.01%
                    	       		Q8ZTW1              	7.35%
                    	       		Q8ZZG9              	6.07%
                    	       		Q8ZV42              	5.33%
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for Q8ZZC4 as seed ortholog is 82%.

Group of orthologs #263. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 P.aerophilum:72

Q5KCJ3              	100.00%		Q8ZT70              	100.00%
Q5KKB2              	6.27%		
Bootstrap support for Q5KCJ3 as seed ortholog is 100%.
Bootstrap support for Q8ZT70 as seed ortholog is 100%.

Group of orthologs #264. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.aerophilum:71

Q5KK76              	100.00%		Q8ZU75              	100.00%
Q5KDS4              	15.68%		
Q5KBM7              	9.32%		
Bootstrap support for Q5KK76 as seed ortholog is 100%.
Bootstrap support for Q8ZU75 as seed ortholog is 100%.

Group of orthologs #265. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.aerophilum:71

Q5K7Y2              	100.00%		Q8ZTY0              	100.00%
                    	       		Q8ZYL6              	10.05%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for Q8ZTY0 as seed ortholog is 100%.

Group of orthologs #266. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.aerophilum:71

Q5KCI8              	100.00%		Q8ZXV9              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for Q8ZXV9 as seed ortholog is 100%.

Group of orthologs #267. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 P.aerophilum:71

Q5KJY3              	100.00%		Q8ZYG2              	100.00%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for Q8ZYG2 as seed ortholog is 100%.

Group of orthologs #268. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.aerophilum:70

Q5KMA0              	100.00%		Q8ZT50              	100.00%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for Q8ZT50 as seed ortholog is 100%.

Group of orthologs #269. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 P.aerophilum:70

Q5KNH2              	100.00%		Q8ZWL3              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for Q8ZWL3 as seed ortholog is 100%.

Group of orthologs #270. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:20 P.aerophilum:69

Q5KKV1              	100.00%		Q8ZYE4              	100.00%
Q5KCA0              	42.75%		
Q5KP65              	32.71%		
Q5K6Z2              	28.44%		
P0CS76              	20.82%		
Q5KHE5              	20.45%		
P0CP68              	20.07%		
P0CP66              	19.52%		
Q5KC34              	19.14%		
Q5KMR8              	15.99%		
Q5KF69              	11.52%		
Q5KG30              	6.13%		
Q5KI66              	5.76%		
Bootstrap support for Q5KKV1 as seed ortholog is 71%.
Alternative seed ortholog is Q5KM53 (20 bits away from this cluster)
Bootstrap support for Q8ZYE4 as seed ortholog is 100%.

Group of orthologs #271. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.aerophilum:69

Q5K6Z0              	100.00%		Q8ZWH7              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for Q8ZWH7 as seed ortholog is 100%.

Group of orthologs #272. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.aerophilum:69

Q5KEF1              	100.00%		Q8ZTX9              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 100%.
Bootstrap support for Q8ZTX9 as seed ortholog is 100%.

Group of orthologs #273. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 P.aerophilum:69

Q5KMS2              	100.00%		Q8ZYP9              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for Q8ZYP9 as seed ortholog is 100%.

Group of orthologs #274. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:23 P.aerophilum:11

Q5KK06              	100.00%		Q8ZYA3              	100.00%
Bootstrap support for Q5KK06 as seed ortholog is 82%.
Bootstrap support for Q8ZYA3 as seed ortholog is 70%.
Alternative seed ortholog is Q8ZUL0 (11 bits away from this cluster)

Group of orthologs #275. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.aerophilum:67

Q5KQ18              	100.00%		Q8ZZH5              	100.00%
Q5KQ94              	43.76%		
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for Q8ZZH5 as seed ortholog is 100%.

Group of orthologs #276. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.aerophilum:67

Q5KIA1              	100.00%		Q8ZUK9              	100.00%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for Q8ZUK9 as seed ortholog is 100%.

Group of orthologs #277. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 P.aerophilum:67

Q5KLK6              	100.00%		Q8ZVN1              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for Q8ZVN1 as seed ortholog is 100%.

Group of orthologs #278. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:14 P.aerophilum:67

Q5KJ42              	100.00%		Q8ZZC7              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 45%.
Alternative seed ortholog is Q5KNB0 (14 bits away from this cluster)
Bootstrap support for Q8ZZC7 as seed ortholog is 100%.

Group of orthologs #279. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 P.aerophilum:66

Q5KHT0              	100.00%		P56635              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for P56635 as seed ortholog is 100%.

Group of orthologs #280. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.aerophilum:65

Q5KED7              	100.00%		Q8ZZ97              	100.00%
Q5KG73              	13.38%		
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for Q8ZZ97 as seed ortholog is 100%.

Group of orthologs #281. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 P.aerophilum:65

P0CQ50              	100.00%		Q8ZTY3              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for Q8ZTY3 as seed ortholog is 100%.

Group of orthologs #282. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 P.aerophilum:64

Q5KN44              	100.00%		Q8ZU08              	100.00%
Bootstrap support for Q5KN44 as seed ortholog is 100%.
Bootstrap support for Q8ZU08 as seed ortholog is 100%.

Group of orthologs #283. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.aerophilum:62

Q5K7U1              	100.00%		Q8ZTW0              	100.00%
Q5K7T2              	38.44%		
Q5KKM9              	32.12%		
Q5KF40              	21.17%		
Bootstrap support for Q5K7U1 as seed ortholog is 100%.
Bootstrap support for Q8ZTW0 as seed ortholog is 100%.

Group of orthologs #284. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 P.aerophilum:62

Q5KKU8              	100.00%		Q8ZVA9              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for Q8ZVA9 as seed ortholog is 100%.

Group of orthologs #285. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.aerophilum:61

Q5KPY6              	100.00%		Q8ZZC9              	100.00%
Q5K924              	32.75%		
Q5KGI6              	28.18%		
Q5K993              	23.24%		
Bootstrap support for Q5KPY6 as seed ortholog is 100%.
Bootstrap support for Q8ZZC9 as seed ortholog is 100%.

Group of orthologs #286. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.aerophilum:61

Q5KHZ6              	100.00%		Q8ZSV9              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for Q8ZSV9 as seed ortholog is 100%.

Group of orthologs #287. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.aerophilum:61

Q5KHJ3              	100.00%		Q8ZTA7              	100.00%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for Q8ZTA7 as seed ortholog is 100%.

Group of orthologs #288. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.aerophilum:61

Q5KHC0              	100.00%		Q8ZU18              	100.00%
Bootstrap support for Q5KHC0 as seed ortholog is 100%.
Bootstrap support for Q8ZU18 as seed ortholog is 100%.

Group of orthologs #289. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 P.aerophilum:61

Q5KEZ6              	100.00%		Q8ZXR9              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for Q8ZXR9 as seed ortholog is 100%.

Group of orthologs #290. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.aerophilum:60

Q5KIY8              	100.00%		Q8ZXZ6              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for Q8ZXZ6 as seed ortholog is 100%.

Group of orthologs #291. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 P.aerophilum:60

Q5KNB6              	100.00%		Q8ZYX3              	100.00%
Bootstrap support for Q5KNB6 as seed ortholog is 100%.
Bootstrap support for Q8ZYX3 as seed ortholog is 100%.

Group of orthologs #292. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.aerophilum:59

Q5KHY1              	100.00%		Q8ZT30              	100.00%
                    	       		Q8ZTL8              	23.49%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for Q8ZT30 as seed ortholog is 100%.

Group of orthologs #293. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.aerophilum:59

Q5KEW1              	100.00%		Q8ZXW6              	100.00%
Q5KBN1              	29.03%		
Bootstrap support for Q5KEW1 as seed ortholog is 100%.
Bootstrap support for Q8ZXW6 as seed ortholog is 100%.

Group of orthologs #294. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 P.aerophilum:59

P0CP72              	100.00%		Q8ZVN8              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for Q8ZVN8 as seed ortholog is 100%.

Group of orthologs #295. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.aerophilum:57

Q5K861              	100.00%		Q8ZYA9              	100.00%
Q5KD31              	100.00%		
Q5KD32              	62.52%		
Q5K862              	61.93%		
Q5KJE2              	57.42%		
Q5KEN0              	46.26%		
Q5KH90              	33.63%		
Bootstrap support for Q5K861 as seed ortholog is 100%.
Bootstrap support for Q5KD31 as seed ortholog is 100%.
Bootstrap support for Q8ZYA9 as seed ortholog is 100%.

Group of orthologs #296. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 P.aerophilum:57

Q5KCV9              	100.00%		Q8ZU30              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for Q8ZU30 as seed ortholog is 100%.

Group of orthologs #297. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.aerophilum:56

Q5K761              	100.00%		Q8ZTE2              	100.00%
Q5KD20              	24.69%		
Bootstrap support for Q5K761 as seed ortholog is 100%.
Bootstrap support for Q8ZTE2 as seed ortholog is 100%.

Group of orthologs #298. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.aerophilum:56

Q5KDU6              	100.00%		Q8ZTY4              	100.00%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for Q8ZTY4 as seed ortholog is 100%.

Group of orthologs #299. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 P.aerophilum:56

Q5KFS4              	100.00%		Q8ZW86              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for Q8ZW86 as seed ortholog is 100%.

Group of orthologs #300. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 P.aerophilum:55

Q5K9G7              	100.00%		Q8ZV60              	100.00%
Bootstrap support for Q5K9G7 as seed ortholog is 100%.
Bootstrap support for Q8ZV60 as seed ortholog is 100%.

Group of orthologs #301. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.aerophilum:54

Q5K9M5              	100.00%		Q8ZWT7              	100.00%
Bootstrap support for Q5K9M5 as seed ortholog is 100%.
Bootstrap support for Q8ZWT7 as seed ortholog is 100%.

Group of orthologs #302. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.aerophilum:54

Q5KAU4              	100.00%		Q8ZZH3              	100.00%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for Q8ZZH3 as seed ortholog is 100%.

Group of orthologs #303. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 P.aerophilum:54

Q5KQ04              	100.00%		Q8ZTE8              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for Q8ZTE8 as seed ortholog is 100%.

Group of orthologs #304. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.aerophilum:52

Q5KGS8              	100.00%		Q7LX31              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for Q7LX31 as seed ortholog is 100%.

Group of orthologs #305. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.aerophilum:52

Q5KG36              	100.00%		Q8ZX28              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for Q8ZX28 as seed ortholog is 100%.

Group of orthologs #306. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.aerophilum:52

Q5KEZ0              	100.00%		Q8ZZK1              	100.00%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for Q8ZZK1 as seed ortholog is 100%.

Group of orthologs #307. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.aerophilum:52

Q5KNE0              	100.00%		Q8ZTU2              	100.00%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for Q8ZTU2 as seed ortholog is 100%.

Group of orthologs #308. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 P.aerophilum:52

Q5KNI6              	100.00%		Q8ZXN8              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for Q8ZXN8 as seed ortholog is 100%.

Group of orthologs #309. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.aerophilum:50

P0CR24              	100.00%		Q8ZYP8              	100.00%
Q5K900              	100.00%		
Q5KIE8              	7.63%		
Bootstrap support for P0CR24 as seed ortholog is 100%.
Bootstrap support for Q5K900 as seed ortholog is 100%.
Bootstrap support for Q8ZYP8 as seed ortholog is 100%.

Group of orthologs #310. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 P.aerophilum:50

Q5KPT1              	100.00%		Q8ZVD7              	100.00%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for Q8ZVD7 as seed ortholog is 100%.

Group of orthologs #311. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.aerophilum:49

Q5KFL3              	100.00%		Q8ZXR3              	100.00%
Q5KPJ0              	29.87%		
Q5KJD9              	14.29%		
Bootstrap support for Q5KFL3 as seed ortholog is 100%.
Bootstrap support for Q8ZXR3 as seed ortholog is 100%.

Group of orthologs #312. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 P.aerophilum:49

Q5KP80              	100.00%		Q8ZXZ5              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for Q8ZXZ5 as seed ortholog is 100%.

Group of orthologs #313. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.aerophilum:48

Q5KCJ7              	100.00%		Q8ZTX7              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for Q8ZTX7 as seed ortholog is 100%.

Group of orthologs #314. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.aerophilum:48

Q5KDM7              	100.00%		Q8ZTM1              	100.00%
Bootstrap support for Q5KDM7 as seed ortholog is 100%.
Bootstrap support for Q8ZTM1 as seed ortholog is 100%.

Group of orthologs #315. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 P.aerophilum:48

Q5K8A9              	100.00%		Q8ZYG5              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 100%.
Bootstrap support for Q8ZYG5 as seed ortholog is 100%.

Group of orthologs #316. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 P.aerophilum:47

Q5KAB9              	100.00%		Q8ZYB4              	100.00%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for Q8ZYB4 as seed ortholog is 100%.

Group of orthologs #317. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.aerophilum:44

Q5KAY4              	100.00%		Q8ZZH1              	100.00%
Bootstrap support for Q5KAY4 as seed ortholog is 100%.
Bootstrap support for Q8ZZH1 as seed ortholog is 100%.

Group of orthologs #318. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.aerophilum:44

Q5KIL7              	100.00%		Q8ZX02              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for Q8ZX02 as seed ortholog is 100%.

Group of orthologs #319. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 P.aerophilum:44

Q5KK46              	100.00%		Q8ZVW1              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for Q8ZVW1 as seed ortholog is 100%.

Group of orthologs #320. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 P.aerophilum:42

Q5KF10              	100.00%		Q8ZXQ6              	100.00%
Bootstrap support for Q5KF10 as seed ortholog is 100%.
Bootstrap support for Q8ZXQ6 as seed ortholog is 100%.

Group of orthologs #321. Best score 40 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.aerophilum:40

Q5K8X7              	100.00%		Q8ZVL5              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for Q8ZVL5 as seed ortholog is 100%.

Group of orthologs #322. Best score 40 bits
Score difference with first non-orthologous sequence - C.neoformans:40 P.aerophilum:40

Q5KEW6              	100.00%		Q8ZV70              	100.00%
Bootstrap support for Q5KEW6 as seed ortholog is 100%.
Bootstrap support for Q8ZV70 as seed ortholog is 100%.