###################################
284 groups of orthologs
368 in-paralogs from C.neoformans
311 in-paralogs from M.jannaschii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:230 M.jannaschii:676

Q5KGG3              	100.00%		Q58445              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 99%.
Bootstrap support for Q58445 as seed ortholog is 100%.

Group of orthologs #2. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:129 M.jannaschii:656

Q5KA71              	100.00%		Q58556              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 99%.
Bootstrap support for Q58556 as seed ortholog is 100%.

Group of orthologs #3. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:470 M.jannaschii:586

Q5KGV5              	100.00%		Q57670              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for Q57670 as seed ortholog is 100%.

Group of orthologs #4. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:433 M.jannaschii:547

Q5KN88              	100.00%		Q58129              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for Q58129 as seed ortholog is 100%.

Group of orthologs #5. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:393 M.jannaschii:535

Q5KBW0              	100.00%		Q57669              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for Q57669 as seed ortholog is 100%.

Group of orthologs #6. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:14 M.jannaschii:507

F5HCX1              	100.00%		Q58623              	100.00%
Bootstrap support for F5HCX1 as seed ortholog is 59%.
Alternative seed ortholog is Q5KEI8 (14 bits away from this cluster)
Bootstrap support for Q58623 as seed ortholog is 100%.

Group of orthologs #7. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:168 M.jannaschii:500

Q5KC33              	100.00%		Q60181              	100.00%
Q5KIB7              	8.59%		
Bootstrap support for Q5KC33 as seed ortholog is 99%.
Bootstrap support for Q60181 as seed ortholog is 100%.

Group of orthologs #8. Best score 486 bits
Score difference with first non-orthologous sequence - C.neoformans:486 M.jannaschii:486

Q5KLA1              	100.00%		Q58574              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for Q58574 as seed ortholog is 100%.

Group of orthologs #9. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:173 M.jannaschii:484

Q5KPM2              	100.00%		Q58357              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 99%.
Bootstrap support for Q58357 as seed ortholog is 100%.

Group of orthologs #10. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:220 M.jannaschii:367

P0CN30              	100.00%		Q57770              	100.00%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for Q57770 as seed ortholog is 100%.

Group of orthologs #11. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 M.jannaschii:458

Q5KLA7              	100.00%		Q60173              	100.00%
Bootstrap support for Q5KLA7 as seed ortholog is 100%.
Bootstrap support for Q60173 as seed ortholog is 100%.

Group of orthologs #12. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:155 M.jannaschii:447

Q5KHJ9              	100.00%		Q58448              	100.00%
Q5KIQ1              	10.26%		
Bootstrap support for Q5KHJ9 as seed ortholog is 99%.
Bootstrap support for Q58448 as seed ortholog is 100%.

Group of orthologs #13. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 M.jannaschii:438

Q5KFS5              	100.00%		Q57681              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for Q57681 as seed ortholog is 100%.

Group of orthologs #14. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:351 M.jannaschii:297

Q5KPJ5              	100.00%		Q57725              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 100%.
Bootstrap support for Q57725 as seed ortholog is 100%.

Group of orthologs #15. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:383 M.jannaschii:431

Q5KNJ3              	100.00%		Q60179              	100.00%
Bootstrap support for Q5KNJ3 as seed ortholog is 100%.
Bootstrap support for Q60179 as seed ortholog is 100%.

Group of orthologs #16. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 M.jannaschii:422

Q5KKT5              	100.00%		Q58626              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for Q58626 as seed ortholog is 100%.

Group of orthologs #17. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 M.jannaschii:416

Q5K9S3              	100.00%		Q58536              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for Q58536 as seed ortholog is 100%.

Group of orthologs #18. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:127 M.jannaschii:399

Q5KCL8              	100.00%		Q58672              	100.00%
Bootstrap support for Q5KCL8 as seed ortholog is 99%.
Bootstrap support for Q58672 as seed ortholog is 100%.

Group of orthologs #19. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:5 M.jannaschii:395

Q5KQ47              	100.00%		Q58405              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 44%.
Alternative seed ortholog is Q5K9H1 (5 bits away from this cluster)
Bootstrap support for Q58405 as seed ortholog is 100%.

Group of orthologs #20. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:280 M.jannaschii:390

Q5K7U0              	100.00%		Q58050              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 99%.
Bootstrap support for Q58050 as seed ortholog is 100%.

Group of orthologs #21. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 M.jannaschii:384

Q5K7V3              	100.00%		Q58776              	100.00%
Bootstrap support for Q5K7V3 as seed ortholog is 100%.
Bootstrap support for Q58776 as seed ortholog is 100%.

Group of orthologs #22. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:271 M.jannaschii:377

Q5KIW8              	100.00%		Q58657              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for Q58657 as seed ortholog is 100%.

Group of orthologs #23. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:13 M.jannaschii:213

Q5KGN2              	100.00%		Q58576              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 66%.
Alternative seed ortholog is Q5KA27 (13 bits away from this cluster)
Bootstrap support for Q58576 as seed ortholog is 100%.

Group of orthologs #24. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 M.jannaschii:344

Q5KF32              	100.00%		Q58722              	100.00%
Q5KKJ5              	5.56%		
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for Q58722 as seed ortholog is 100%.

Group of orthologs #25. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 M.jannaschii:339

Q5K9Z1              	100.00%		Q58090              	100.00%
Bootstrap support for Q5K9Z1 as seed ortholog is 100%.
Bootstrap support for Q58090 as seed ortholog is 100%.

Group of orthologs #26. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 M.jannaschii:327

Q5KJ87              	100.00%		Q58783              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for Q58783 as seed ortholog is 100%.

Group of orthologs #27. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:21 M.jannaschii:224

Q5KIH7              	100.00%		Q59037              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 68%.
Alternative seed ortholog is Q5KM80 (21 bits away from this cluster)
Bootstrap support for Q59037 as seed ortholog is 96%.

Group of orthologs #28. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 M.jannaschii:319

Q5KII0              	100.00%		Q58815              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for Q58815 as seed ortholog is 100%.

Group of orthologs #29. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 M.jannaschii:315

Q5KGH1              	100.00%		Q57565              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for Q57565 as seed ortholog is 100%.

Group of orthologs #30. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 M.jannaschii:313

Q5KG05              	100.00%		Q58373              	100.00%
Q5KKL2              	57.68%		
Bootstrap support for Q5KG05 as seed ortholog is 100%.
Bootstrap support for Q58373 as seed ortholog is 100%.

Group of orthologs #31. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 M.jannaschii:311

Q5KHK8              	100.00%		Q58851              	100.00%
Bootstrap support for Q5KHK8 as seed ortholog is 100%.
Bootstrap support for Q58851 as seed ortholog is 100%.

Group of orthologs #32. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:181 M.jannaschii:305

Q5KBA0              	100.00%		Q60356              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 99%.
Bootstrap support for Q60356 as seed ortholog is 100%.

Group of orthologs #33. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 M.jannaschii:300

Q5KP44              	100.00%		Q59011              	100.00%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for Q59011 as seed ortholog is 100%.

Group of orthologs #34. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:95 M.jannaschii:297

Q5KMF6              	100.00%		Q58413              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 93%.
Bootstrap support for Q58413 as seed ortholog is 100%.

Group of orthologs #35. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 M.jannaschii:287

P0CQ14              	100.00%		Q58530              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for Q58530 as seed ortholog is 100%.

Group of orthologs #36. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:218 M.jannaschii:287

Q5KK33              	100.00%		Q58201              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for Q58201 as seed ortholog is 100%.

Group of orthologs #37. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 M.jannaschii:286

Q5KK07              	100.00%		Q57657              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for Q57657 as seed ortholog is 100%.

Group of orthologs #38. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 M.jannaschii:277

Q5KA97              	100.00%		Q58224              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for Q58224 as seed ortholog is 100%.

Group of orthologs #39. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 M.jannaschii:277

Q5KLD7              	100.00%		Q58635              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for Q58635 as seed ortholog is 100%.

Group of orthologs #40. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:88 M.jannaschii:275

Q5KHJ1              	100.00%		Q58950              	100.00%
Q5KEI6              	13.46%		
Bootstrap support for Q5KHJ1 as seed ortholog is 98%.
Bootstrap support for Q58950 as seed ortholog is 100%.

Group of orthologs #41. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 M.jannaschii:273

Q5K9E9              	100.00%		Q58531              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for Q58531 as seed ortholog is 100%.

Group of orthologs #42. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 M.jannaschii:273

Q5KE15              	100.00%		Q58643              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for Q58643 as seed ortholog is 100%.

Group of orthologs #43. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 M.jannaschii:273

Q5KIH6              	100.00%		Q57612              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for Q57612 as seed ortholog is 100%.

Group of orthologs #44. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:32 M.jannaschii:273

Q5KNM0              	100.00%		Q58131              	100.00%
Bootstrap support for Q5KNM0 as seed ortholog is 79%.
Bootstrap support for Q58131 as seed ortholog is 100%.

Group of orthologs #45. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 M.jannaschii:266

Q5KCY4              	100.00%		Q58575              	100.00%
Bootstrap support for Q5KCY4 as seed ortholog is 100%.
Bootstrap support for Q58575 as seed ortholog is 100%.

Group of orthologs #46. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 M.jannaschii:266

Q5KC69              	100.00%		Q60175              	100.00%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for Q60175 as seed ortholog is 100%.

Group of orthologs #47. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 M.jannaschii:266

Q5KPK7              	100.00%		Q57658              	100.00%
Bootstrap support for Q5KPK7 as seed ortholog is 100%.
Bootstrap support for Q57658 as seed ortholog is 100%.

Group of orthologs #48. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 M.jannaschii:264

Q5KJ46              	100.00%		Q60174              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for Q60174 as seed ortholog is 100%.

Group of orthologs #49. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:68 M.jannaschii:263

Q5KEX3              	100.00%		Q58806              	100.00%
Q5K8N2              	35.93%		
Q5KIR2              	28.80%		
Bootstrap support for Q5KEX3 as seed ortholog is 94%.
Bootstrap support for Q58806 as seed ortholog is 100%.

Group of orthologs #50. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 M.jannaschii:262

Q5KF19              	100.00%		Q58475              	100.00%
Bootstrap support for Q5KF19 as seed ortholog is 100%.
Bootstrap support for Q58475 as seed ortholog is 100%.

Group of orthologs #51. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:24 M.jannaschii:254

Q5KI84              	100.00%		Q58130              	100.00%
                    	       		Q58991              	12.13%
Bootstrap support for Q5KI84 as seed ortholog is 73%.
Alternative seed ortholog is Q5KP10 (24 bits away from this cluster)
Bootstrap support for Q58130 as seed ortholog is 100%.

Group of orthologs #52. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:41 M.jannaschii:164

P0CO88              	100.00%		Q57731              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 86%.
Bootstrap support for Q57731 as seed ortholog is 100%.

Group of orthologs #53. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 M.jannaschii:246

Q5KAB8              	100.00%		Q57911              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for Q57911 as seed ortholog is 100%.

Group of orthologs #54. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 M.jannaschii:246

Q5KK90              	100.00%		Q58508              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for Q58508 as seed ortholog is 100%.

Group of orthologs #55. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 M.jannaschii:244

Q5KFZ4              	100.00%		Q58772              	100.00%
Bootstrap support for Q5KFZ4 as seed ortholog is 100%.
Bootstrap support for Q58772 as seed ortholog is 100%.

Group of orthologs #56. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 M.jannaschii:242

Q5KBY0              	100.00%		Q57568              	100.00%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for Q57568 as seed ortholog is 100%.

Group of orthologs #57. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:122 M.jannaschii:242

Q5KI46              	100.00%		Q58659              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 99%.
Bootstrap support for Q58659 as seed ortholog is 100%.

Group of orthologs #58. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 M.jannaschii:241

Q5KN95              	100.00%		Q57663              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for Q57663 as seed ortholog is 100%.

Group of orthologs #59. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:2 M.jannaschii:240

P0CQ76              	100.00%		Q58083              	100.00%
P0CQ74              	15.54%		
Bootstrap support for P0CQ76 as seed ortholog is 51%.
Alternative seed ortholog is P0CQ70 (2 bits away from this cluster)
Bootstrap support for Q58083 as seed ortholog is 100%.

Group of orthologs #60. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 M.jannaschii:120

Q5K899              	100.00%		Q58454              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for Q58454 as seed ortholog is 99%.

Group of orthologs #61. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 M.jannaschii:238

Q5KBM8              	100.00%		Q57991              	100.00%
Bootstrap support for Q5KBM8 as seed ortholog is 100%.
Bootstrap support for Q57991 as seed ortholog is 100%.

Group of orthologs #62. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:26 M.jannaschii:234

Q5KPM3              	100.00%		P81291              	100.00%
                    	       		Q58409              	26.49%
Bootstrap support for Q5KPM3 as seed ortholog is 69%.
Alternative seed ortholog is P0CM02 (26 bits away from this cluster)
Bootstrap support for P81291 as seed ortholog is 100%.

Group of orthologs #63. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 M.jannaschii:229

Q5KFJ3              	100.00%		Q58884              	100.00%
Q5K7N5              	9.74%		Q58371              	23.23%
Q5KLG5              	8.91%		Q57809              	18.30%
Q5KLP9              	8.30%		Q60275              	7.09%
Q5KDY4              	7.55%		
Q5KQ07              	5.21%		
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for Q58884 as seed ortholog is 100%.

Group of orthologs #64. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 M.jannaschii:161

Q5K7N9              	100.00%		Q49593              	100.00%
Q5KNC3              	17.65%		
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for Q49593 as seed ortholog is 100%.

Group of orthologs #65. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 M.jannaschii:229

Q5KB11              	100.00%		Q57635              	100.00%
Q5KNS4              	11.01%		
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for Q57635 as seed ortholog is 100%.

Group of orthologs #66. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 M.jannaschii:228

Q5KJ10              	100.00%		Q58425              	100.00%
Bootstrap support for Q5KJ10 as seed ortholog is 100%.
Bootstrap support for Q58425 as seed ortholog is 100%.

Group of orthologs #67. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 M.jannaschii:109

Q5KEG8              	100.00%		Q57624              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for Q57624 as seed ortholog is 98%.

Group of orthologs #68. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 M.jannaschii:226

P0CM20              	100.00%		Q57645              	100.00%
Bootstrap support for P0CM20 as seed ortholog is 100%.
Bootstrap support for Q57645 as seed ortholog is 100%.

Group of orthologs #69. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:144 M.jannaschii:220

Q5K8Z3              	100.00%		P54017              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for P54017 as seed ortholog is 100%.

Group of orthologs #70. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 M.jannaschii:220

Q5KP99              	100.00%		Q60178              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for Q60178 as seed ortholog is 100%.

Group of orthologs #71. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 M.jannaschii:219

Q5KG06              	100.00%		Q58374              	100.00%
Q5KKL0              	57.49%		
Q5KH79              	32.29%		
Bootstrap support for Q5KG06 as seed ortholog is 100%.
Bootstrap support for Q58374 as seed ortholog is 100%.

Group of orthologs #72. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 M.jannaschii:218

P0CM24              	100.00%		Q58542              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for Q58542 as seed ortholog is 100%.

Group of orthologs #73. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 M.jannaschii:217

Q5KKG6              	100.00%		Q57572              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for Q57572 as seed ortholog is 100%.

Group of orthologs #74. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 M.jannaschii:215

Q5K9E3              	100.00%		P54014              	100.00%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for P54014 as seed ortholog is 100%.

Group of orthologs #75. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 M.jannaschii:213

Q5K9W1              	100.00%		Q58295              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for Q58295 as seed ortholog is 100%.

Group of orthologs #76. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 M.jannaschii:209

Q5KAU8              	100.00%		Q58992              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for Q58992 as seed ortholog is 100%.

Group of orthologs #77. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 M.jannaschii:209

Q5KK45              	100.00%		Q58291              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for Q58291 as seed ortholog is 100%.

Group of orthologs #78. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 M.jannaschii:208

Q5KJR9              	100.00%		Q58239              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for Q58239 as seed ortholog is 100%.

Group of orthologs #79. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 M.jannaschii:206

Q5KE01              	100.00%		Q58058              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for Q58058 as seed ortholog is 100%.

Group of orthologs #80. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 M.jannaschii:205

P0CM88              	100.00%		Q57626              	100.00%
                    	       		Q58633              	14.46%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for Q57626 as seed ortholog is 100%.

Group of orthologs #81. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:47 M.jannaschii:205

Q5KN70              	100.00%		Q58424              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 91%.
Bootstrap support for Q58424 as seed ortholog is 100%.

Group of orthologs #82. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:81 M.jannaschii:204

Q5KFP5              	100.00%		Q58020              	100.00%
Bootstrap support for Q5KFP5 as seed ortholog is 98%.
Bootstrap support for Q58020 as seed ortholog is 100%.

Group of orthologs #83. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:88 M.jannaschii:199

Q5KIZ5              	100.00%		Q58595              	100.00%
                    	       		Q58787              	38.05%
                    	       		Q57926              	22.28%
Bootstrap support for Q5KIZ5 as seed ortholog is 98%.
Bootstrap support for Q58595 as seed ortholog is 100%.

Group of orthologs #84. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:10 M.jannaschii:196

Q5KIV1              	100.00%		Q60177              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 57%.
Alternative seed ortholog is Q5KCK7 (10 bits away from this cluster)
Bootstrap support for Q60177 as seed ortholog is 100%.

Group of orthologs #85. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 M.jannaschii:94

P0CN40              	100.00%		Q57896              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for Q57896 as seed ortholog is 98%.

Group of orthologs #86. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 M.jannaschii:191

Q5K947              	100.00%		P54063              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for P54063 as seed ortholog is 100%.

Group of orthologs #87. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 M.jannaschii:190

Q5K7B4              	100.00%		Q58347              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for Q58347 as seed ortholog is 100%.

Group of orthologs #88. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 M.jannaschii:186

Q5KF97              	100.00%		Q57984              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for Q57984 as seed ortholog is 100%.

Group of orthologs #89. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 M.jannaschii:180

Q5KA00              	100.00%		Q58108              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for Q58108 as seed ortholog is 100%.

Group of orthologs #90. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 M.jannaschii:179

Q5KAU9              	100.00%		Q59046              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for Q59046 as seed ortholog is 100%.

Group of orthologs #91. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 M.jannaschii:178

Q5KN34              	100.00%		Q57686              	100.00%
Bootstrap support for Q5KN34 as seed ortholog is 100%.
Bootstrap support for Q57686 as seed ortholog is 100%.

Group of orthologs #92. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 M.jannaschii:174

P0CQ34              	100.00%		Q57981              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for Q57981 as seed ortholog is 100%.

Group of orthologs #93. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:57 M.jannaschii:172

P0CP26              	100.00%		Q58105              	100.00%
Q5KGK2              	17.79%		
Bootstrap support for P0CP26 as seed ortholog is 97%.
Bootstrap support for Q58105 as seed ortholog is 100%.

Group of orthologs #94. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 M.jannaschii:171

Q5KFA0              	100.00%		Q58938              	100.00%
Bootstrap support for Q5KFA0 as seed ortholog is 100%.
Bootstrap support for Q58938 as seed ortholog is 100%.

Group of orthologs #95. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 M.jannaschii:169

P0CS60              	100.00%		Q58839              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for Q58839 as seed ortholog is 100%.

Group of orthologs #96. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 M.jannaschii:169

Q5KNR0              	100.00%		Q57710              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for Q57710 as seed ortholog is 100%.

Group of orthologs #97. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:14 M.jannaschii:168

Q5K8C6              	100.00%		Q58696              	100.00%
Bootstrap support for Q5K8C6 as seed ortholog is 63%.
Alternative seed ortholog is Q5K8Q2 (14 bits away from this cluster)
Bootstrap support for Q58696 as seed ortholog is 100%.

Group of orthologs #98. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:61 M.jannaschii:166

Q5KHX7              	100.00%		Q58560              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 94%.
Bootstrap support for Q58560 as seed ortholog is 100%.

Group of orthologs #99. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 M.jannaschii:166

Q5KNA0              	100.00%		Q57854              	100.00%
Bootstrap support for Q5KNA0 as seed ortholog is 100%.
Bootstrap support for Q57854 as seed ortholog is 100%.

Group of orthologs #100. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 M.jannaschii:165

Q5K8J3              	100.00%		Q58369              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for Q58369 as seed ortholog is 100%.

Group of orthologs #101. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:16 M.jannaschii:164

Q5KAM1              	100.00%		Q59050              	100.00%
Q5KJF0              	100.00%		
Bootstrap support for Q5KAM1 as seed ortholog is 68%.
Alternative seed ortholog is Q5KN08 (16 bits away from this cluster)
Bootstrap support for Q5KJF0 as seed ortholog is 69%.
Alternative seed ortholog is Q5KN08 (16 bits away from this cluster)
Bootstrap support for Q59050 as seed ortholog is 100%.

Group of orthologs #102. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 M.jannaschii:163

Q5KJD4              	100.00%		P54060              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for P54060 as seed ortholog is 100%.

Group of orthologs #103. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 M.jannaschii:60

Q5KCG5              	100.00%		Q58516              	100.00%
Bootstrap support for Q5KCG5 as seed ortholog is 100%.
Bootstrap support for Q58516 as seed ortholog is 82%.

Group of orthologs #104. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:119 M.jannaschii:161

P0CQ56              	100.00%		P54109              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 99%.
Bootstrap support for P54109 as seed ortholog is 100%.

Group of orthologs #105. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:87 M.jannaschii:159

Q5KDR3              	100.00%		Q58339              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 97%.
Bootstrap support for Q58339 as seed ortholog is 100%.

Group of orthologs #106. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 M.jannaschii:158

P0CS70              	100.00%		Q58558              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for Q58558 as seed ortholog is 100%.

Group of orthologs #107. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 M.jannaschii:156

Q5KAF2              	100.00%		P54015              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for P54015 as seed ortholog is 100%.

Group of orthologs #108. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:71 M.jannaschii:154

Q5KDT3              	100.00%		Q58725              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 98%.
Bootstrap support for Q58725 as seed ortholog is 100%.

Group of orthologs #109. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:22 M.jannaschii:154

Q5KLS2              	100.00%		Q58694              	100.00%
Bootstrap support for Q5KLS2 as seed ortholog is 66%.
Alternative seed ortholog is Q5KJC6 (22 bits away from this cluster)
Bootstrap support for Q58694 as seed ortholog is 100%.

Group of orthologs #110. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 M.jannaschii:152

Q5KEV1              	100.00%		P54045              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for P54045 as seed ortholog is 100%.

Group of orthologs #111. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 M.jannaschii:151

Q5KA19              	100.00%		P54040              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for P54040 as seed ortholog is 100%.

Group of orthologs #112. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 M.jannaschii:150

Q5KDD6              	100.00%		P54062              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for P54062 as seed ortholog is 100%.

Group of orthologs #113. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 M.jannaschii:149

Q5KNK2              	100.00%		P54039              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for P54039 as seed ortholog is 100%.

Group of orthologs #114. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 M.jannaschii:148

Q5KFT0              	100.00%		P54021              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for P54021 as seed ortholog is 100%.

Group of orthologs #115. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:81 M.jannaschii:146

Q5KFM3              	100.00%		Q58931              	100.00%
Bootstrap support for Q5KFM3 as seed ortholog is 99%.
Bootstrap support for Q58931 as seed ortholog is 100%.

Group of orthologs #116. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:32 M.jannaschii:142

Q5K9Z8              	100.00%		Q58146              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 86%.
Bootstrap support for Q58146 as seed ortholog is 100%.

Group of orthologs #117. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 M.jannaschii:140

Q5KIJ0              	100.00%		P54012              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for P54012 as seed ortholog is 100%.

Group of orthologs #118. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 M.jannaschii:138

Q5KE92              	100.00%		Q57689              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for Q57689 as seed ortholog is 100%.

Group of orthologs #119. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 M.jannaschii:138

Q5KEZ6              	100.00%		Q58670              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for Q58670 as seed ortholog is 100%.

Group of orthologs #120. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 M.jannaschii:135

P0CO22              	100.00%		Q58109              	100.00%
Bootstrap support for P0CO22 as seed ortholog is 100%.
Bootstrap support for Q58109 as seed ortholog is 100%.

Group of orthologs #121. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 M.jannaschii:135

Q5KAU7              	100.00%		Q58810              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for Q58810 as seed ortholog is 100%.

Group of orthologs #122. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 M.jannaschii:133

Q5KNF9              	100.00%		Q58093              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for Q58093 as seed ortholog is 100%.

Group of orthologs #123. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 M.jannaschii:133

Q5KQ04              	100.00%		Q57638              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for Q57638 as seed ortholog is 100%.

Group of orthologs #124. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:52 M.jannaschii:60

Q5KQ79              	100.00%		Q60317              	100.00%
                    	       		Q58097              	23.95%
Bootstrap support for Q5KQ79 as seed ortholog is 92%.
Bootstrap support for Q60317 as seed ortholog is 94%.

Group of orthologs #125. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 M.jannaschii:130

Q5KGR6              	100.00%		Q58661              	100.00%
Q5KAX0              	11.41%		
Bootstrap support for Q5KGR6 as seed ortholog is 100%.
Bootstrap support for Q58661 as seed ortholog is 100%.

Group of orthologs #126. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 M.jannaschii:130

Q5KFF3              	100.00%		Q58192              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for Q58192 as seed ortholog is 100%.

Group of orthologs #127. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 M.jannaschii:130

Q5KND5              	100.00%		Q60182              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for Q60182 as seed ortholog is 100%.

Group of orthologs #128. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 M.jannaschii:129

Q5K979              	100.00%		P54041              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for P54041 as seed ortholog is 100%.

Group of orthologs #129. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 M.jannaschii:129

Q5KAX6              	100.00%		Q58435              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for Q58435 as seed ortholog is 100%.

Group of orthologs #130. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 M.jannaschii:129

Q5KPU2              	100.00%		Q60367              	100.00%
Bootstrap support for Q5KPU2 as seed ortholog is 100%.
Bootstrap support for Q60367 as seed ortholog is 100%.

Group of orthologs #131. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 M.jannaschii:128

Q5KDX8              	100.00%		Q58761              	100.00%
Q5KCA3              	36.31%		
Bootstrap support for Q5KDX8 as seed ortholog is 100%.
Bootstrap support for Q58761 as seed ortholog is 100%.

Group of orthologs #132. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 M.jannaschii:128

Q5K716              	100.00%		Q57625              	100.00%
Bootstrap support for Q5K716 as seed ortholog is 100%.
Bootstrap support for Q57625 as seed ortholog is 100%.

Group of orthologs #133. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 M.jannaschii:128

Q5KC51              	100.00%		Q57581              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for Q57581 as seed ortholog is 100%.

Group of orthologs #134. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:27 M.jannaschii:127

F5HFW5              	100.00%		Q57664              	100.00%
                    	       		Q58455              	7.94%
Bootstrap support for F5HFW5 as seed ortholog is 74%.
Alternative seed ortholog is Q5K809 (27 bits away from this cluster)
Bootstrap support for Q57664 as seed ortholog is 100%.

Group of orthologs #135. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 M.jannaschii:127

Q5KCZ2              	100.00%		Q57935              	100.00%
                    	       		Q58433              	13.93%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for Q57935 as seed ortholog is 100%.

Group of orthologs #136. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:64 M.jannaschii:126

Q5K959              	100.00%		P54037              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 99%.
Bootstrap support for P54037 as seed ortholog is 100%.

Group of orthologs #137. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 M.jannaschii:126

Q5KEJ6              	100.00%		P54049              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for P54049 as seed ortholog is 100%.

Group of orthologs #138. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 M.jannaschii:126

Q5KB97              	100.00%		Q58660              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for Q58660 as seed ortholog is 100%.

Group of orthologs #139. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 M.jannaschii:126

Q5KMA6              	100.00%		Q57963              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for Q57963 as seed ortholog is 100%.

Group of orthologs #140. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 M.jannaschii:124

Q5KCI0              	100.00%		Q57930              	100.00%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for Q57930 as seed ortholog is 100%.

Group of orthologs #141. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 M.jannaschii:82

Q5KM46              	100.00%		Q58365              	100.00%
Bootstrap support for Q5KM46 as seed ortholog is 100%.
Bootstrap support for Q58365 as seed ortholog is 98%.

Group of orthologs #142. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:43 M.jannaschii:123

Q5KN49              	100.00%		Q59056              	100.00%
Q5KMN9              	15.04%		
Bootstrap support for Q5KN49 as seed ortholog is 76%.
Bootstrap support for Q59056 as seed ortholog is 100%.

Group of orthologs #143. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 M.jannaschii:122

Q5KK78              	100.00%		Q57916              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for Q57916 as seed ortholog is 100%.

Group of orthologs #144. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 M.jannaschii:122

Q5KNB6              	100.00%		Q57891              	100.00%
Bootstrap support for Q5KNB6 as seed ortholog is 100%.
Bootstrap support for Q57891 as seed ortholog is 100%.

Group of orthologs #145. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 M.jannaschii:121

Q5KJJ4              	100.00%		Q58118              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for Q58118 as seed ortholog is 100%.

Group of orthologs #146. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 M.jannaschii:121

Q5KPZ1              	100.00%		P54034              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for P54034 as seed ortholog is 100%.

Group of orthologs #147. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 M.jannaschii:120

P0CQ36              	100.00%		Q58881              	100.00%
Bootstrap support for P0CQ36 as seed ortholog is 100%.
Bootstrap support for Q58881 as seed ortholog is 100%.

Group of orthologs #148. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 M.jannaschii:120

Q5KJI8              	100.00%		Q58406              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for Q58406 as seed ortholog is 100%.

Group of orthologs #149. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:64 M.jannaschii:119

Q5KGW0              	100.00%		P54020              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 99%.
Bootstrap support for P54020 as seed ortholog is 100%.

Group of orthologs #150. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 M.jannaschii:119

Q5KEW6              	100.00%		Q58692              	100.00%
Bootstrap support for Q5KEW6 as seed ortholog is 100%.
Bootstrap support for Q58692 as seed ortholog is 100%.

Group of orthologs #151. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:27 M.jannaschii:118

Q5KH49              	100.00%		Q58639              	100.00%
Q5KGP3              	15.70%		
Q5KN52              	13.10%		
Q5KC65              	12.19%		
Q5KE86              	10.37%		
Q5KL35              	10.17%		
Q5KED3              	9.83%		
Q5KJN9              	8.51%		
Q5KN23              	7.80%		
Bootstrap support for Q5KH49 as seed ortholog is 71%.
Alternative seed ortholog is Q5K896 (27 bits away from this cluster)
Bootstrap support for Q58639 as seed ortholog is 100%.

Group of orthologs #152. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 M.jannaschii:51

P0CO20              	100.00%		Q58501              	100.00%
Q5KDW3              	15.72%		
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for Q58501 as seed ortholog is 90%.

Group of orthologs #153. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 M.jannaschii:118

Q5KEX8              	100.00%		P54018              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for P54018 as seed ortholog is 100%.

Group of orthologs #154. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:74 M.jannaschii:117

Q5KA46              	100.00%		P54019              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 99%.
Bootstrap support for P54019 as seed ortholog is 100%.

Group of orthologs #155. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 M.jannaschii:117

Q5KMU3              	100.00%		Q58597              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for Q58597 as seed ortholog is 100%.

Group of orthologs #156. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 M.jannaschii:116

Q5KIW5              	100.00%		Q58601              	100.00%
Bootstrap support for Q5KIW5 as seed ortholog is 100%.
Bootstrap support for Q58601 as seed ortholog is 100%.

Group of orthologs #157. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 M.jannaschii:114

Q5KAS7              	100.00%		Q60357              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for Q60357 as seed ortholog is 100%.

Group of orthologs #158. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 M.jannaschii:114

Q5KIN6              	100.00%		Q57675              	100.00%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for Q57675 as seed ortholog is 100%.

Group of orthologs #159. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 M.jannaschii:114

Q5KL66              	100.00%		Q58032              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for Q58032 as seed ortholog is 100%.

Group of orthologs #160. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:34 M.jannaschii:113

Q5KCC8              	100.00%		Q60358              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 80%.
Bootstrap support for Q60358 as seed ortholog is 100%.

Group of orthologs #161. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 M.jannaschii:112

Q5KKQ0              	100.00%		Q57989              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for Q57989 as seed ortholog is 100%.

Group of orthologs #162. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 M.jannaschii:112

Q5KQ70              	100.00%		P54042              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for P54042 as seed ortholog is 100%.

Group of orthologs #163. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 M.jannaschii:111

Q5KML2              	100.00%		P61159              	100.00%
                    	       		Q60314              	12.69%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for P61159 as seed ortholog is 100%.

Group of orthologs #164. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 M.jannaschii:111

Q5KJU2              	100.00%		P54044              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for P54044 as seed ortholog is 100%.

Group of orthologs #165. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 M.jannaschii:111

Q5KM68              	100.00%		P54024              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for P54024 as seed ortholog is 100%.

Group of orthologs #166. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 M.jannaschii:110

Q5KAF6              	100.00%		Q58739              	100.00%
Q5KPM5              	40.20%		Q60366              	26.23%
Bootstrap support for Q5KAF6 as seed ortholog is 100%.
Bootstrap support for Q58739 as seed ortholog is 100%.

Group of orthologs #167. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 M.jannaschii:110

Q5KLA4              	100.00%		Q58276              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for Q58276 as seed ortholog is 100%.

Group of orthologs #168. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 M.jannaschii:109

P0CR18              	100.00%		Q58998              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for Q58998 as seed ortholog is 100%.

Group of orthologs #169. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 M.jannaschii:109

Q5KIC8              	100.00%		Q58767              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for Q58767 as seed ortholog is 100%.

Group of orthologs #170. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 M.jannaschii:107

Q5K8J5              	100.00%		Q58047              	100.00%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for Q58047 as seed ortholog is 100%.

Group of orthologs #171. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 M.jannaschii:106

Q5KIG6              	100.00%		Q57648              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for Q57648 as seed ortholog is 100%.

Group of orthologs #172. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:40 M.jannaschii:106

Q5KIC1              	100.00%		Q57757              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 83%.
Bootstrap support for Q57757 as seed ortholog is 100%.

Group of orthologs #173. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 M.jannaschii:106

Q5KHX3              	100.00%		Q58348              	100.00%
Bootstrap support for Q5KHX3 as seed ortholog is 100%.
Bootstrap support for Q58348 as seed ortholog is 100%.

Group of orthologs #174. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:35 M.jannaschii:105

Q5KKX9              	100.00%		Q58859              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 76%.
Bootstrap support for Q58859 as seed ortholog is 100%.

Group of orthologs #175. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 M.jannaschii:103

Q5KM24              	100.00%		Q57636              	100.00%
Bootstrap support for Q5KM24 as seed ortholog is 100%.
Bootstrap support for Q57636 as seed ortholog is 100%.

Group of orthologs #176. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 M.jannaschii:102

Q5K844              	100.00%		Q60331              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for Q60331 as seed ortholog is 100%.

Group of orthologs #177. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:44 M.jannaschii:102

Q5KC64              	100.00%		Q58270              	100.00%
Bootstrap support for Q5KC64 as seed ortholog is 91%.
Bootstrap support for Q58270 as seed ortholog is 100%.

Group of orthologs #178. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 M.jannaschii:100

Q5K9W6              	100.00%		Q58011              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for Q58011 as seed ortholog is 100%.

Group of orthologs #179. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 M.jannaschii:100

Q5KBW9              	100.00%		P54043              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for P54043 as seed ortholog is 100%.

Group of orthologs #180. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 M.jannaschii:100

Q5KPF3              	100.00%		Q57679              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for Q57679 as seed ortholog is 100%.

Group of orthologs #181. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:9 M.jannaschii:99

Q5KFD9              	100.00%		Q58634              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 66%.
Alternative seed ortholog is Q5KM42 (9 bits away from this cluster)
Bootstrap support for Q58634 as seed ortholog is 100%.

Group of orthologs #182. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 M.jannaschii:98

Q5KHC0              	100.00%		Q60364              	100.00%
Bootstrap support for Q5KHC0 as seed ortholog is 100%.
Bootstrap support for Q60364 as seed ortholog is 100%.

Group of orthologs #183. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:35 M.jannaschii:97

Q5KE74              	100.00%		Q58874              	100.00%
Bootstrap support for Q5KE74 as seed ortholog is 81%.
Bootstrap support for Q58874 as seed ortholog is 100%.

Group of orthologs #184. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 M.jannaschii:96

Q5KLU5              	100.00%		Q59000              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for Q59000 as seed ortholog is 100%.

Group of orthologs #185. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 M.jannaschii:95

Q5KBD4              	100.00%		Q58504              	100.00%
Bootstrap support for Q5KBD4 as seed ortholog is 100%.
Bootstrap support for Q58504 as seed ortholog is 100%.

Group of orthologs #186. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 M.jannaschii:94

Q5KCS8              	100.00%		Q57955              	100.00%
Q5KF65              	40.02%		
Q5KD72              	35.74%		
Q5KKR8              	32.58%		
Q5K8L3              	7.22%		
Bootstrap support for Q5KCS8 as seed ortholog is 100%.
Bootstrap support for Q57955 as seed ortholog is 100%.

Group of orthologs #187. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 M.jannaschii:94

Q5KJL6              	100.00%		P54057              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for P54057 as seed ortholog is 100%.

Group of orthologs #188. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 M.jannaschii:93

P0CQ58              	100.00%		P54059              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for P54059 as seed ortholog is 100%.

Group of orthologs #189. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 M.jannaschii:93

Q5KBR9              	100.00%		Q60363              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for Q60363 as seed ortholog is 100%.

Group of orthologs #190. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:17 M.jannaschii:92

Q5KK76              	100.00%		Q57695              	100.00%
Q5KDS4              	12.84%		
Q5KBM7              	6.26%		
Bootstrap support for Q5KK76 as seed ortholog is 68%.
Alternative seed ortholog is Q5KA86 (17 bits away from this cluster)
Bootstrap support for Q57695 as seed ortholog is 100%.

Group of orthologs #191. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 M.jannaschii:92

Q5K760              	100.00%		Q58936              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for Q58936 as seed ortholog is 100%.

Group of orthologs #192. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 M.jannaschii:91

Q5KNW1              	100.00%		Q58172              	100.00%
                    	       		Q57996              	84.39%
Bootstrap support for Q5KNW1 as seed ortholog is 100%.
Bootstrap support for Q58172 as seed ortholog is 100%.

Group of orthologs #193. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 M.jannaschii:91

Q5KAD9              	100.00%		Q58997              	100.00%
Bootstrap support for Q5KAD9 as seed ortholog is 100%.
Bootstrap support for Q58997 as seed ortholog is 100%.

Group of orthologs #194. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 M.jannaschii:91

Q5KNH2              	100.00%		P54036              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for P54036 as seed ortholog is 100%.

Group of orthologs #195. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 M.jannaschii:90

Q5KDL9              	100.00%		Q60176              	100.00%
Q5KDR0              	40.32%		
Bootstrap support for Q5KDL9 as seed ortholog is 100%.
Bootstrap support for Q60176 as seed ortholog is 100%.

Group of orthologs #196. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 M.jannaschii:89

Q5KLJ6              	100.00%		P54038              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for P54038 as seed ortholog is 100%.

Group of orthologs #197. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:18 M.jannaschii:89

Q5KKE2              	100.00%		Q58065              	100.00%
Bootstrap support for Q5KKE2 as seed ortholog is 56%.
Alternative seed ortholog is Q5KH19 (18 bits away from this cluster)
Bootstrap support for Q58065 as seed ortholog is 100%.

Group of orthologs #198. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 M.jannaschii:88

Q5KL89              	100.00%		P54016              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for P54016 as seed ortholog is 100%.

Group of orthologs #199. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 M.jannaschii:87

Q5K7Y2              	100.00%		Q57697              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for Q57697 as seed ortholog is 100%.

Group of orthologs #200. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 M.jannaschii:87

Q5K9N0              	100.00%		Q59055              	100.00%
Bootstrap support for Q5K9N0 as seed ortholog is 100%.
Bootstrap support for Q59055 as seed ortholog is 100%.

Group of orthologs #201. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 M.jannaschii:87

Q5KD79              	100.00%		Q58759              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for Q58759 as seed ortholog is 100%.

Group of orthologs #202. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 M.jannaschii:86

Q5K9Q9              	100.00%		Q58418              	100.00%
                    	       		Q58488              	10.00%
                    	       		Q58664              	7.62%
                    	       		Q58967              	7.38%
                    	       		Q58283              	5.24%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for Q58418 as seed ortholog is 100%.

Group of orthologs #203. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 M.jannaschii:86

Q5KGE3              	100.00%		P54050              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for P54050 as seed ortholog is 100%.

Group of orthologs #204. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 M.jannaschii:86

Q5KKY5              	100.00%		P54029              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for P54029 as seed ortholog is 100%.

Group of orthologs #205. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 M.jannaschii:85

Q5KNR6              	100.00%		Q58352              	100.00%
Q5KLJ0              	7.29%		
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for Q58352 as seed ortholog is 100%.

Group of orthologs #206. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:16 M.jannaschii:85

P0CQ52              	100.00%		P54066              	100.00%
Bootstrap support for P0CQ52 as seed ortholog is 81%.
Bootstrap support for P54066 as seed ortholog is 100%.

Group of orthologs #207. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 M.jannaschii:85

P0CN18              	100.00%		Q57907              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 100%.
Bootstrap support for Q57907 as seed ortholog is 100%.

Group of orthologs #208. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 M.jannaschii:85

Q5K939              	100.00%		Q58029              	100.00%
Bootstrap support for Q5K939 as seed ortholog is 100%.
Bootstrap support for Q58029 as seed ortholog is 100%.

Group of orthologs #209. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 M.jannaschii:85

Q5KBH4              	100.00%		Q57599              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for Q57599 as seed ortholog is 100%.

Group of orthologs #210. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 M.jannaschii:84

Q5KDP4              	100.00%		Q60335              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for Q60335 as seed ortholog is 100%.

Group of orthologs #211. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 M.jannaschii:82

Q5KJA5              	100.00%		Q58464              	100.00%
Q5KJD6              	42.46%		
Q5K8F0              	39.94%		
Bootstrap support for Q5KJA5 as seed ortholog is 100%.
Bootstrap support for Q58464 as seed ortholog is 100%.

Group of orthologs #212. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 M.jannaschii:82

Q5K6Z0              	100.00%		P54033              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for P54033 as seed ortholog is 100%.

Group of orthologs #213. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 M.jannaschii:82

Q5K7I5              	100.00%		P54023              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for P54023 as seed ortholog is 100%.

Group of orthologs #214. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 M.jannaschii:82

Q5K952              	100.00%		Q58370              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for Q58370 as seed ortholog is 100%.

Group of orthologs #215. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 M.jannaschii:82

Q5KLK6              	100.00%		P54051              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for P54051 as seed ortholog is 100%.

Group of orthologs #216. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:30 M.jannaschii:82

Q5KJ42              	100.00%		Q58885              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 71%.
Alternative seed ortholog is Q5KFL1 (30 bits away from this cluster)
Bootstrap support for Q58885 as seed ortholog is 100%.

Group of orthologs #217. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 M.jannaschii:82

Q5KLI5              	100.00%		Q58771              	100.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for Q58771 as seed ortholog is 100%.

Group of orthologs #218. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:19 M.jannaschii:81

Q5KED0              	100.00%		Q58216              	100.00%
Bootstrap support for Q5KED0 as seed ortholog is 66%.
Alternative seed ortholog is Q5KGV6 (19 bits away from this cluster)
Bootstrap support for Q58216 as seed ortholog is 100%.

Group of orthologs #219. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 M.jannaschii:81

Q5KCP8              	100.00%		Q58900              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for Q58900 as seed ortholog is 100%.

Group of orthologs #220. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:4 M.jannaschii:81

Q5KMF3              	100.00%		P54030              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 59%.
Alternative seed ortholog is Q5KJC9 (4 bits away from this cluster)
Bootstrap support for P54030 as seed ortholog is 100%.

Group of orthologs #221. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:3 M.jannaschii:81

Q5KLQ6              	100.00%		Q58026              	100.00%
Bootstrap support for Q5KLQ6 as seed ortholog is 47%.
Alternative seed ortholog is Q5KHF3 (3 bits away from this cluster)
Bootstrap support for Q58026 as seed ortholog is 100%.

Group of orthologs #222. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 M.jannaschii:81

Q5KQ20              	100.00%		Q58356              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for Q58356 as seed ortholog is 100%.

Group of orthologs #223. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 M.jannaschii:79

Q5K7J3              	100.00%		P54010              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for P54010 as seed ortholog is 100%.

Group of orthologs #224. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 M.jannaschii:79

Q5KMA0              	100.00%		P54047              	100.00%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for P54047 as seed ortholog is 100%.

Group of orthologs #225. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 M.jannaschii:78

Q5KJX0              	100.00%		Q58941              	100.00%
Q5KDV3              	82.33%		
Bootstrap support for Q5KJX0 as seed ortholog is 100%.
Bootstrap support for Q58941 as seed ortholog is 100%.

Group of orthologs #226. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:19 M.jannaschii:77

P0CR10              	100.00%		Q58969              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 67%.
Alternative seed ortholog is P0CQ70 (19 bits away from this cluster)
Bootstrap support for Q58969 as seed ortholog is 100%.

Group of orthologs #227. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 M.jannaschii:77

Q5KF07              	100.00%		Q59025              	100.00%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for Q59025 as seed ortholog is 100%.

Group of orthologs #228. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 M.jannaschii:77

Q5KK62              	100.00%		Q58070              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for Q58070 as seed ortholog is 100%.

Group of orthologs #229. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 M.jannaschii:77

Q5KNG6              	100.00%		Q57884              	100.00%
Bootstrap support for Q5KNG6 as seed ortholog is 100%.
Bootstrap support for Q57884 as seed ortholog is 100%.

Group of orthologs #230. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 M.jannaschii:77

Q5KP80              	100.00%		Q58481              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for Q58481 as seed ortholog is 100%.

Group of orthologs #231. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 M.jannaschii:74

Q5KQ06              	100.00%		Q57711              	100.00%
                    	       		Q58350              	42.90%
                    	       		O06917              	15.35%
                    	       		Q58741              	13.53%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for Q57711 as seed ortholog is 100%.

Group of orthologs #232. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:15 M.jannaschii:74

Q5KCX2              	100.00%		Q58860              	100.00%
Q5K8F5              	17.43%		
Q5KNK5              	5.17%		
Bootstrap support for Q5KCX2 as seed ortholog is 64%.
Alternative seed ortholog is Q5KGT7 (15 bits away from this cluster)
Bootstrap support for Q58860 as seed ortholog is 100%.

Group of orthologs #233. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 M.jannaschii:74

Q5KHZ6              	100.00%		Q57840              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for Q57840 as seed ortholog is 100%.

Group of orthologs #234. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 M.jannaschii:74

Q5KK13              	100.00%		Q57741              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for Q57741 as seed ortholog is 100%.

Group of orthologs #235. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 M.jannaschii:73

Q5KH62              	100.00%		Q58500              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for Q58500 as seed ortholog is 100%.

Group of orthologs #236. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 M.jannaschii:72

Q5KMJ6              	100.00%		Q58927              	100.00%
                    	       		Q58114              	8.72%
Bootstrap support for Q5KMJ6 as seed ortholog is 100%.
Bootstrap support for Q58927 as seed ortholog is 100%.

Group of orthologs #237. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 M.jannaschii:72

Q5K9M5              	100.00%		Q58827              	100.00%
Bootstrap support for Q5K9M5 as seed ortholog is 100%.
Bootstrap support for Q58827 as seed ortholog is 100%.

Group of orthologs #238. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 M.jannaschii:72

Q5KJY4              	100.00%		Q58728              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for Q58728 as seed ortholog is 100%.

Group of orthologs #239. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 M.jannaschii:71

Q5KCV9              	100.00%		Q58450              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for Q58450 as seed ortholog is 100%.

Group of orthologs #240. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 M.jannaschii:71

Q5KE66              	100.00%		Q58060              	100.00%
Bootstrap support for Q5KE66 as seed ortholog is 100%.
Bootstrap support for Q58060 as seed ortholog is 100%.

Group of orthologs #241. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:17 M.jannaschii:71

Q5KEF1              	100.00%		Q58548              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 75%.
Bootstrap support for Q58548 as seed ortholog is 100%.

Group of orthologs #242. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 M.jannaschii:71

Q5KPS5              	100.00%		Q58040              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for Q58040 as seed ortholog is 100%.

Group of orthologs #243. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 M.jannaschii:70

Q5KJB6              	100.00%		Q58609              	100.00%
Bootstrap support for Q5KJB6 as seed ortholog is 100%.
Bootstrap support for Q58609 as seed ortholog is 100%.

Group of orthologs #244. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 M.jannaschii:69

Q5KHT0              	100.00%		Q58625              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for Q58625 as seed ortholog is 100%.

Group of orthologs #245. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 M.jannaschii:67

Q5KH50              	100.00%		Q58977              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for Q58977 as seed ortholog is 100%.

Group of orthologs #246. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 M.jannaschii:67

Q5KJY8              	100.00%		Q58497              	100.00%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for Q58497 as seed ortholog is 100%.

Group of orthologs #247. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 M.jannaschii:66

Q5KM94              	100.00%		Q58619              	100.00%
                    	       		Q57964              	6.25%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for Q58619 as seed ortholog is 100%.

Group of orthologs #248. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 M.jannaschii:66

Q5KN25              	100.00%		P54053              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for P54053 as seed ortholog is 100%.

Group of orthologs #249. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 M.jannaschii:64

P0CQ50              	100.00%		P54027              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for P54027 as seed ortholog is 100%.

Group of orthologs #250. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 M.jannaschii:64

Q5KL56              	100.00%		P54011              	100.00%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for P54011 as seed ortholog is 100%.

Group of orthologs #251. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 M.jannaschii:62

P0CQ92              	100.00%		Q57742              	100.00%
P0CQ84              	11.87%		
P0CR06              	11.28%		
P0CR02              	11.21%		
P0CQ78              	10.29%		
P0CQ82              	9.83%		
P0CQ98              	9.83%		
P0CQ90              	9.63%		
Q5KE58              	9.37%		
P0CQ88              	8.31%		
P0CQ94              	6.99%		
Q5KKF5              	5.47%		
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for Q57742 as seed ortholog is 100%.

Group of orthologs #252. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 M.jannaschii:62

Q5KPM8              	100.00%		P54061              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for P54061 as seed ortholog is 100%.

Group of orthologs #253. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 M.jannaschii:61

Q5K8I1              	100.00%		Q58092              	100.00%
Q5KP83              	15.34%		
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for Q58092 as seed ortholog is 100%.

Group of orthologs #254. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 M.jannaschii:61

Q5KN26              	100.00%		Q58054              	100.00%
Bootstrap support for Q5KN26 as seed ortholog is 100%.
Bootstrap support for Q58054 as seed ortholog is 100%.

Group of orthologs #255. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 M.jannaschii:60

Q5KCI8              	100.00%		Q57887              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for Q57887 as seed ortholog is 100%.

Group of orthologs #256. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 M.jannaschii:60

Q5KHJ3              	100.00%		P54065              	100.00%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for P54065 as seed ortholog is 100%.

Group of orthologs #257. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 M.jannaschii:60

Q5KIC5              	100.00%		P54022              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for P54022 as seed ortholog is 100%.

Group of orthologs #258. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 M.jannaschii:59

Q5KP01              	100.00%		Q58944              	100.00%
Q5KJV0              	17.73%		
Q5KNW6              	17.07%		
Bootstrap support for Q5KP01 as seed ortholog is 100%.
Bootstrap support for Q58944 as seed ortholog is 100%.

Group of orthologs #259. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 M.jannaschii:59

Q5KCJ7              	100.00%		Q58103              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for Q58103 as seed ortholog is 100%.

Group of orthologs #260. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:14 M.jannaschii:59

Q5KG23              	100.00%		Q58925              	100.00%
Bootstrap support for Q5KG23 as seed ortholog is 71%.
Alternative seed ortholog is Q5KE19 (14 bits away from this cluster)
Bootstrap support for Q58925 as seed ortholog is 100%.

Group of orthologs #261. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 M.jannaschii:59

Q5KMS2              	100.00%		Q57649              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for Q57649 as seed ortholog is 100%.

Group of orthologs #262. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 M.jannaschii:57

Q5KNE0              	100.00%		P54009              	100.00%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for P54009 as seed ortholog is 100%.

Group of orthologs #263. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 M.jannaschii:56

Q5KBN5              	100.00%		Q58025              	100.00%
Bootstrap support for Q5KBN5 as seed ortholog is 100%.
Bootstrap support for Q58025 as seed ortholog is 100%.

Group of orthologs #264. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 M.jannaschii:55

Q5KGS8              	100.00%		Q57849              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for Q57849 as seed ortholog is 100%.

Group of orthologs #265. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 M.jannaschii:52

Q5K8X7              	100.00%		Q58338              	100.00%
                    	       		Q58292              	6.82%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for Q58338 as seed ortholog is 100%.

Group of orthologs #266. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 M.jannaschii:52

Q5K9F9              	100.00%		Q58933              	100.00%
Bootstrap support for Q5K9F9 as seed ortholog is 100%.
Bootstrap support for Q58933 as seed ortholog is 100%.

Group of orthologs #267. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 M.jannaschii:50

Q5KDM7              	100.00%		Q58563              	100.00%
Bootstrap support for Q5KDM7 as seed ortholog is 100%.
Bootstrap support for Q58563 as seed ortholog is 100%.

Group of orthologs #268. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 M.jannaschii:49

Q5KDU6              	100.00%		P54028              	100.00%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for P54028 as seed ortholog is 100%.

Group of orthologs #269. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 M.jannaschii:49

Q5KG36              	100.00%		Q58923              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for Q58923 as seed ortholog is 100%.

Group of orthologs #270. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 M.jannaschii:49

Q5KPT1              	100.00%		Q57899              	100.00%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for Q57899 as seed ortholog is 100%.

Group of orthologs #271. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:2 M.jannaschii:48

Q5K9V2              	100.00%		Q58735              	100.00%
Q5K8I9              	19.89%		
Q5KK41              	18.82%		
Q5KGS1              	18.28%		
Q5K810              	15.86%		
Q5KGZ4              	15.32%		
Q5K7V1              	14.52%		
Q5KJ96              	14.25%		
P0CQ42              	11.29%		
Q5KGN7              	9.95%		
Q5KAE3              	7.53%		
Q5KAF3              	7.53%		
Q5KDD9              	7.53%		
Q5KJY2              	6.99%		
Q5KEV2              	6.99%		
Q5K854              	6.18%		
Q5KDV8              	6.18%		
Q5KCN2              	5.65%		
Q5KKU3              	5.11%		
Q5KC86              	5.11%		
Q5KFY4              	5.11%		
Bootstrap support for Q5K9V2 as seed ortholog is 51%.
Alternative seed ortholog is Q5KI42 (2 bits away from this cluster)
Bootstrap support for Q58735 as seed ortholog is 100%.

Group of orthologs #272. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 M.jannaschii:48

Q5K761              	100.00%		Q58414              	100.00%
Q5KD20              	25.43%		
Bootstrap support for Q5K761 as seed ortholog is 100%.
Bootstrap support for Q58414 as seed ortholog is 100%.

Group of orthologs #273. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 M.jannaschii:48

Q5K7B5              	100.00%		Q57842              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for Q57842 as seed ortholog is 100%.

Group of orthologs #274. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 M.jannaschii:48

Q5KGV9              	100.00%		P54013              	100.00%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for P54013 as seed ortholog is 100%.

Group of orthologs #275. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 M.jannaschii:47

P0CS95              	100.00%		Q59040              	100.00%
Bootstrap support for P0CS95 as seed ortholog is 100%.
Bootstrap support for Q59040 as seed ortholog is 100%.

Group of orthologs #276. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 M.jannaschii:47

Q5KK46              	100.00%		P54110              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for P54110 as seed ortholog is 100%.

Group of orthologs #277. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 M.jannaschii:47

Q5KKT1              	100.00%		Q58377              	100.00%
Bootstrap support for Q5KKT1 as seed ortholog is 100%.
Bootstrap support for Q58377 as seed ortholog is 100%.

Group of orthologs #278. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 M.jannaschii:46

Q5KLQ5              	100.00%		Q58294              	100.00%
Q5K796              	12.58%		
Q5KCE8              	12.42%		
Q5KDX5              	9.85%		
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for Q58294 as seed ortholog is 100%.

Group of orthologs #279. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 M.jannaschii:46

Q5KJG6              	100.00%		Q57890              	100.00%
                    	       		Q57749              	11.09%
Bootstrap support for Q5KJG6 as seed ortholog is 100%.
Bootstrap support for Q57890 as seed ortholog is 100%.

Group of orthologs #280. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 M.jannaschii:46

Q5KAB9              	100.00%		P54054              	100.00%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for P54054 as seed ortholog is 100%.

Group of orthologs #281. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 M.jannaschii:46

Q5KGF9              	100.00%		Q58716              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for Q58716 as seed ortholog is 100%.

Group of orthologs #282. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 M.jannaschii:42

Q5KLS4              	100.00%		Q58483              	100.00%
Q5KLR3              	69.66%		Q58141              	28.32%
Bootstrap support for Q5KLS4 as seed ortholog is 100%.
Bootstrap support for Q58483 as seed ortholog is 100%.

Group of orthologs #283. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 M.jannaschii:42

Q5KPH8              	100.00%		Q58208              	100.00%
                    	       		Q58823              	6.37%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for Q58208 as seed ortholog is 100%.

Group of orthologs #284. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 M.jannaschii:42

Q5KI15              	100.00%		Q59013              	100.00%
Bootstrap support for Q5KI15 as seed ortholog is 100%.
Bootstrap support for Q59013 as seed ortholog is 100%.