###################################
2185 groups of orthologs
2353 in-paralogs from C.neoformans
3293 in-paralogs from L.chalumnae
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4737 bits
Score difference with first non-orthologous sequence - C.neoformans:4737 L.chalumnae:3322

Q5KFR9              	100.00%		H3B1H3              	100.00%
Bootstrap support for Q5KFR9 as seed ortholog is 100%.
Bootstrap support for H3B1H3 as seed ortholog is 100%.

Group of orthologs #2. Best score 3473 bits
Score difference with first non-orthologous sequence - C.neoformans:3473 L.chalumnae:3473

Q5KPW2              	100.00%		H3AQI5              	100.00%
Bootstrap support for Q5KPW2 as seed ortholog is 100%.
Bootstrap support for H3AQI5 as seed ortholog is 100%.

Group of orthologs #3. Best score 2068 bits
Score difference with first non-orthologous sequence - C.neoformans:2068 L.chalumnae:727

Q5KNM2              	100.00%		H3AU29              	100.00%
Bootstrap support for Q5KNM2 as seed ortholog is 100%.
Bootstrap support for H3AU29 as seed ortholog is 100%.

Group of orthologs #4. Best score 1990 bits
Score difference with first non-orthologous sequence - C.neoformans:1146 L.chalumnae:1990

Q5KET5              	100.00%		H2ZS81              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for H2ZS81 as seed ortholog is 100%.

Group of orthologs #5. Best score 1917 bits
Score difference with first non-orthologous sequence - C.neoformans:1917 L.chalumnae:1917

Q5KA29              	100.00%		H3AN14              	100.00%
                    	       		H3AKV2              	48.85%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for H3AN14 as seed ortholog is 100%.

Group of orthologs #6. Best score 1841 bits
Score difference with first non-orthologous sequence - C.neoformans:1841 L.chalumnae:1841

P0CN26              	100.00%		H3BCH2              	100.00%
Bootstrap support for P0CN26 as seed ortholog is 100%.
Bootstrap support for H3BCH2 as seed ortholog is 100%.

Group of orthologs #7. Best score 1778 bits
Score difference with first non-orthologous sequence - C.neoformans:1778 L.chalumnae:1778

Q5KFC9              	100.00%		H3AU80              	100.00%
                    	       		H3BFJ1              	37.83%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for H3AU80 as seed ortholog is 100%.

Group of orthologs #8. Best score 1514 bits
Score difference with first non-orthologous sequence - C.neoformans:1514 L.chalumnae:1514

Q5KGG3              	100.00%		H3AVP5              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for H3AVP5 as seed ortholog is 100%.

Group of orthologs #9. Best score 1333 bits
Score difference with first non-orthologous sequence - C.neoformans:1333 L.chalumnae:1333

Q5KC33              	100.00%		H3BBW8              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for H3BBW8 as seed ortholog is 100%.

Group of orthologs #10. Best score 1289 bits
Score difference with first non-orthologous sequence - C.neoformans:1289 L.chalumnae:1289

Q5KIB7              	100.00%		H3A0Y3              	100.00%
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for H3A0Y3 as seed ortholog is 100%.

Group of orthologs #11. Best score 1263 bits
Score difference with first non-orthologous sequence - C.neoformans:1263 L.chalumnae:1263

Q5KEH7              	100.00%		H3AK74              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for H3AK74 as seed ortholog is 100%.

Group of orthologs #12. Best score 1260 bits
Score difference with first non-orthologous sequence - C.neoformans:516 L.chalumnae:711

Q5KJ25              	100.00%		H2ZX54              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for H2ZX54 as seed ortholog is 100%.

Group of orthologs #13. Best score 1254 bits
Score difference with first non-orthologous sequence - C.neoformans:1254 L.chalumnae:1254

Q5KFV9              	100.00%		H3BGV0              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for H3BGV0 as seed ortholog is 100%.

Group of orthologs #14. Best score 1212 bits
Score difference with first non-orthologous sequence - C.neoformans:1212 L.chalumnae:1212

Q5KBW5              	100.00%		H3B4L8              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for H3B4L8 as seed ortholog is 100%.

Group of orthologs #15. Best score 1173 bits
Score difference with first non-orthologous sequence - C.neoformans:1173 L.chalumnae:1173

Q5KP97              	100.00%		H3A5L4              	100.00%
                    	       		H3ALH9              	40.26%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for H3A5L4 as seed ortholog is 100%.

Group of orthologs #16. Best score 1158 bits
Score difference with first non-orthologous sequence - C.neoformans:1158 L.chalumnae:477

Q5KPX3              	100.00%		H2ZXQ2              	100.00%
                    	       		H3ARY3              	9.13%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for H2ZXQ2 as seed ortholog is 100%.

Group of orthologs #17. Best score 1154 bits
Score difference with first non-orthologous sequence - C.neoformans:1154 L.chalumnae:1050

Q5KIQ1              	100.00%		H3AYF8              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for H3AYF8 as seed ortholog is 100%.

Group of orthologs #18. Best score 1124 bits
Score difference with first non-orthologous sequence - C.neoformans:1124 L.chalumnae:1124

Q5KGK1              	100.00%		H3AI30              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for H3AI30 as seed ortholog is 100%.

Group of orthologs #19. Best score 1124 bits
Score difference with first non-orthologous sequence - C.neoformans:1124 L.chalumnae:1124

Q5KPM2              	100.00%		H3BI03              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for H3BI03 as seed ortholog is 100%.

Group of orthologs #20. Best score 1119 bits
Score difference with first non-orthologous sequence - C.neoformans:1119 L.chalumnae:977

Q5KHJ9              	100.00%		H3A6N0              	100.00%
                    	       		H3ASK6              	78.88%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for H3A6N0 as seed ortholog is 100%.

Group of orthologs #21. Best score 1111 bits
Score difference with first non-orthologous sequence - C.neoformans:1111 L.chalumnae:1111

Q5K9W1              	100.00%		H3B666              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for H3B666 as seed ortholog is 100%.

Group of orthologs #22. Best score 1092 bits
Score difference with first non-orthologous sequence - C.neoformans:1092 L.chalumnae:872

Q5KG64              	100.00%		H3AQ24              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for H3AQ24 as seed ortholog is 100%.

Group of orthologs #23. Best score 1083 bits
Score difference with first non-orthologous sequence - C.neoformans:1083 L.chalumnae:1083

P0CR22              	100.00%		H3AX27              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for H3AX27 as seed ortholog is 100%.

Group of orthologs #24. Best score 1074 bits
Score difference with first non-orthologous sequence - C.neoformans:1074 L.chalumnae:1074

Q5KM99              	100.00%		H3BGE5              	100.00%
Bootstrap support for Q5KM99 as seed ortholog is 100%.
Bootstrap support for H3BGE5 as seed ortholog is 100%.

Group of orthologs #25. Best score 1070 bits
Score difference with first non-orthologous sequence - C.neoformans:513 L.chalumnae:581

Q5KGT3              	100.00%		H3AYQ6              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for H3AYQ6 as seed ortholog is 100%.

Group of orthologs #26. Best score 1069 bits
Score difference with first non-orthologous sequence - C.neoformans:1069 L.chalumnae:57

Q5KA71              	100.00%		H3AWB6              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for H3AWB6 as seed ortholog is 94%.

Group of orthologs #27. Best score 1067 bits
Score difference with first non-orthologous sequence - C.neoformans:418 L.chalumnae:1067

Q5KH79              	100.00%		H2ZUU5              	100.00%
Bootstrap support for Q5KH79 as seed ortholog is 100%.
Bootstrap support for H2ZUU5 as seed ortholog is 100%.

Group of orthologs #28. Best score 1064 bits
Score difference with first non-orthologous sequence - C.neoformans:452 L.chalumnae:764

Q5KHW3              	100.00%		H3AKY2              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for H3AKY2 as seed ortholog is 100%.

Group of orthologs #29. Best score 1052 bits
Score difference with first non-orthologous sequence - C.neoformans:862 L.chalumnae:659

Q5KCR8              	100.00%		H3AEE1              	100.00%
                    	       		H3BAQ9              	72.59%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for H3AEE1 as seed ortholog is 100%.

Group of orthologs #30. Best score 1052 bits
Score difference with first non-orthologous sequence - C.neoformans:655 L.chalumnae:661

Q5KD67              	100.00%		H3AYJ2              	100.00%
                    	       		H3A6R4              	12.83%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for H3AYJ2 as seed ortholog is 100%.

Group of orthologs #31. Best score 1035 bits
Score difference with first non-orthologous sequence - C.neoformans:1035 L.chalumnae:1035

Q5K754              	100.00%		H3A6E7              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for H3A6E7 as seed ortholog is 100%.

Group of orthologs #32. Best score 1006 bits
Score difference with first non-orthologous sequence - C.neoformans:1006 L.chalumnae:1006

Q5KAR2              	100.00%		H3A1H0              	100.00%
Bootstrap support for Q5KAR2 as seed ortholog is 100%.
Bootstrap support for H3A1H0 as seed ortholog is 100%.

Group of orthologs #33. Best score 1002 bits
Score difference with first non-orthologous sequence - C.neoformans:633 L.chalumnae:641

Q5KCV6              	100.00%		H3BDY4              	100.00%
                    	       		H3ANB8              	61.08%
                    	       		M3XI19              	55.98%
                    	       		H2ZU49              	45.37%
Bootstrap support for Q5KCV6 as seed ortholog is 100%.
Bootstrap support for H3BDY4 as seed ortholog is 100%.

Group of orthologs #34. Best score 994 bits
Score difference with first non-orthologous sequence - C.neoformans:994 L.chalumnae:994

Q5KEV8              	100.00%		H3AM97              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for H3AM97 as seed ortholog is 100%.

Group of orthologs #35. Best score 966 bits
Score difference with first non-orthologous sequence - C.neoformans:234 L.chalumnae:214

Q5KKM4              	100.00%		H2ZV91              	100.00%
Q5KKP4              	79.73%		H3AB35              	69.93%
                    	       		H2ZV15              	45.75%
                    	       		H3AWU4              	42.48%
                    	       		H3B4D4              	35.29%
Bootstrap support for Q5KKM4 as seed ortholog is 100%.
Bootstrap support for H2ZV91 as seed ortholog is 99%.

Group of orthologs #36. Best score 950 bits
Score difference with first non-orthologous sequence - C.neoformans:950 L.chalumnae:950

Q5KA48              	100.00%		H3AL55              	100.00%
Bootstrap support for Q5KA48 as seed ortholog is 100%.
Bootstrap support for H3AL55 as seed ortholog is 100%.

Group of orthologs #37. Best score 950 bits
Score difference with first non-orthologous sequence - C.neoformans:950 L.chalumnae:950

Q5KEG6              	100.00%		H3BA48              	100.00%
Bootstrap support for Q5KEG6 as seed ortholog is 100%.
Bootstrap support for H3BA48 as seed ortholog is 100%.

Group of orthologs #38. Best score 949 bits
Score difference with first non-orthologous sequence - C.neoformans:949 L.chalumnae:949

Q5KL19              	100.00%		H3AKC9              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for H3AKC9 as seed ortholog is 100%.

Group of orthologs #39. Best score 945 bits
Score difference with first non-orthologous sequence - C.neoformans:945 L.chalumnae:346

Q5KMH0              	100.00%		H3AQQ2              	100.00%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for H3AQQ2 as seed ortholog is 100%.

Group of orthologs #40. Best score 934 bits
Score difference with first non-orthologous sequence - C.neoformans:934 L.chalumnae:934

Q5K7U0              	100.00%		H3ALQ7              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for H3ALQ7 as seed ortholog is 100%.

Group of orthologs #41. Best score 930 bits
Score difference with first non-orthologous sequence - C.neoformans:930 L.chalumnae:930

Q5KIL9              	100.00%		H3AFR8              	100.00%
                    	       		H3B7D9              	63.67%
Bootstrap support for Q5KIL9 as seed ortholog is 100%.
Bootstrap support for H3AFR8 as seed ortholog is 100%.

Group of orthologs #42. Best score 927 bits
Score difference with first non-orthologous sequence - C.neoformans:927 L.chalumnae:927

P0CR38              	100.00%		H3AG44              	100.00%
                    	       		H3AIC7              	60.98%
Bootstrap support for P0CR38 as seed ortholog is 100%.
Bootstrap support for H3AG44 as seed ortholog is 100%.

Group of orthologs #43. Best score 908 bits
Score difference with first non-orthologous sequence - C.neoformans:498 L.chalumnae:254

Q5K7R6              	100.00%		H3AQ38              	100.00%
                    	       		H2ZTU7              	54.86%
                    	       		H3B357              	47.16%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for H3AQ38 as seed ortholog is 100%.

Group of orthologs #44. Best score 905 bits
Score difference with first non-orthologous sequence - C.neoformans:905 L.chalumnae:381

Q5KJI1              	100.00%		H3A9S4              	100.00%
                    	       		H3ALJ7              	60.95%
                    	       		H3AHC8              	58.12%
                    	       		H3AVX9              	56.89%
                    	       		H3AW23              	14.97%
                    	       		H3AY11              	14.70%
                    	       		H3A7R4              	12.37%
                    	       		H3AWW6              	12.04%
                    	       		H3A495              	7.14%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for H3A9S4 as seed ortholog is 100%.

Group of orthologs #45. Best score 903 bits
Score difference with first non-orthologous sequence - C.neoformans:903 L.chalumnae:903

Q5KLE4              	100.00%		H3AKV9              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for H3AKV9 as seed ortholog is 100%.

Group of orthologs #46. Best score 898 bits
Score difference with first non-orthologous sequence - C.neoformans:898 L.chalumnae:789

Q5K8Q4              	100.00%		H3B8B4              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for H3B8B4 as seed ortholog is 100%.

Group of orthologs #47. Best score 886 bits
Score difference with first non-orthologous sequence - C.neoformans:886 L.chalumnae:886

Q5KDU2              	100.00%		H3AXQ9              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for H3AXQ9 as seed ortholog is 100%.

Group of orthologs #48. Best score 881 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:208

Q5KJN9              	100.00%		M3XIT3              	100.00%
                    	       		H2ZW74              	15.56%
Bootstrap support for Q5KJN9 as seed ortholog is 98%.
Bootstrap support for M3XIT3 as seed ortholog is 99%.

Group of orthologs #49. Best score 876 bits
Score difference with first non-orthologous sequence - C.neoformans:876 L.chalumnae:638

Q5KDY4              	100.00%		H3AS78              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for H3AS78 as seed ortholog is 100%.

Group of orthologs #50. Best score 873 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:242

Q5K6Z6              	100.00%		H3BFV4              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 100%.
Bootstrap support for H3BFV4 as seed ortholog is 100%.

Group of orthologs #51. Best score 869 bits
Score difference with first non-orthologous sequence - C.neoformans:869 L.chalumnae:527

Q5KF97              	100.00%		H3A782              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for H3A782 as seed ortholog is 100%.

Group of orthologs #52. Best score 869 bits
Score difference with first non-orthologous sequence - C.neoformans:869 L.chalumnae:869

Q5KGV5              	100.00%		H3AJG5              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for H3AJG5 as seed ortholog is 100%.

Group of orthologs #53. Best score 863 bits
Score difference with first non-orthologous sequence - C.neoformans:863 L.chalumnae:863

Q5KH77              	100.00%		H3AP88              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for H3AP88 as seed ortholog is 100%.

Group of orthologs #54. Best score 852 bits
Score difference with first non-orthologous sequence - C.neoformans:226 L.chalumnae:348

Q5KEX1              	100.00%		H3AEU0              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 99%.
Bootstrap support for H3AEU0 as seed ortholog is 100%.

Group of orthologs #55. Best score 851 bits
Score difference with first non-orthologous sequence - C.neoformans:743 L.chalumnae:851

Q5KBA0              	100.00%		H3AEC4              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for H3AEC4 as seed ortholog is 100%.

Group of orthologs #56. Best score 840 bits
Score difference with first non-orthologous sequence - C.neoformans:840 L.chalumnae:840

Q5K9S3              	100.00%		H3ADM5              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for H3ADM5 as seed ortholog is 100%.

Group of orthologs #57. Best score 835 bits
Score difference with first non-orthologous sequence - C.neoformans:684 L.chalumnae:713

Q5KIK6              	100.00%		H3AUZ5              	100.00%
Q5KE64              	9.87%		
Bootstrap support for Q5KIK6 as seed ortholog is 100%.
Bootstrap support for H3AUZ5 as seed ortholog is 100%.

Group of orthologs #58. Best score 829 bits
Score difference with first non-orthologous sequence - C.neoformans:829 L.chalumnae:829

P0CN82              	100.00%		H3AP55              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for H3AP55 as seed ortholog is 100%.

Group of orthologs #59. Best score 820 bits
Score difference with first non-orthologous sequence - C.neoformans:310 L.chalumnae:583

Q5KN49              	100.00%		H2ZY13              	100.00%
                    	       		H3AJ76              	26.68%
Bootstrap support for Q5KN49 as seed ortholog is 100%.
Bootstrap support for H2ZY13 as seed ortholog is 100%.

Group of orthologs #60. Best score 811 bits
Score difference with first non-orthologous sequence - C.neoformans:811 L.chalumnae:232

Q5KBP7              	100.00%		H3AG06              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for H3AG06 as seed ortholog is 100%.

Group of orthologs #61. Best score 811 bits
Score difference with first non-orthologous sequence - C.neoformans:811 L.chalumnae:811

Q5KIS3              	100.00%		M3XKA5              	100.00%
Bootstrap support for Q5KIS3 as seed ortholog is 100%.
Bootstrap support for M3XKA5 as seed ortholog is 100%.

Group of orthologs #62. Best score 807 bits
Score difference with first non-orthologous sequence - C.neoformans:807 L.chalumnae:451

P0CN32              	100.00%		H3AWE2              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for H3AWE2 as seed ortholog is 100%.

Group of orthologs #63. Best score 805 bits
Score difference with first non-orthologous sequence - C.neoformans:805 L.chalumnae:805

Q5KIH7              	100.00%		H3AQW1              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for H3AQW1 as seed ortholog is 100%.

Group of orthologs #64. Best score 803 bits
Score difference with first non-orthologous sequence - C.neoformans:803 L.chalumnae:803

Q5KMN3              	100.00%		H3AUF4              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for H3AUF4 as seed ortholog is 100%.

Group of orthologs #65. Best score 803 bits
Score difference with first non-orthologous sequence - C.neoformans:803 L.chalumnae:803

Q5KN88              	100.00%		H3B017              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for H3B017 as seed ortholog is 100%.

Group of orthologs #66. Best score 802 bits
Score difference with first non-orthologous sequence - C.neoformans:802 L.chalumnae:802

Q5KMF6              	100.00%		H2ZWJ3              	100.00%
                    	       		H3B5X3              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for H2ZWJ3 as seed ortholog is 100%.
Bootstrap support for H3B5X3 as seed ortholog is 100%.

Group of orthologs #67. Best score 783 bits
Score difference with first non-orthologous sequence - C.neoformans:783 L.chalumnae:783

Q5KE57              	100.00%		H3BFQ8              	100.00%
Bootstrap support for Q5KE57 as seed ortholog is 100%.
Bootstrap support for H3BFQ8 as seed ortholog is 100%.

Group of orthologs #68. Best score 782 bits
Score difference with first non-orthologous sequence - C.neoformans:782 L.chalumnae:782

Q5KH73              	100.00%		H3AWH5              	100.00%
                    	       		H3AW35              	58.30%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for H3AWH5 as seed ortholog is 100%.

Group of orthologs #69. Best score 779 bits
Score difference with first non-orthologous sequence - C.neoformans:779 L.chalumnae:318

Q5KJ33              	100.00%		H3ARK4              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for H3ARK4 as seed ortholog is 100%.

Group of orthologs #70. Best score 777 bits
Score difference with first non-orthologous sequence - C.neoformans:777 L.chalumnae:289

Q5KMU3              	100.00%		H3ALQ1              	100.00%
                    	       		H3BH99              	56.78%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for H3ALQ1 as seed ortholog is 100%.

Group of orthologs #71. Best score 766 bits
Score difference with first non-orthologous sequence - C.neoformans:35 L.chalumnae:119

Q5KP96              	100.00%		H3B556              	100.00%
                    	       		H3B1E3              	59.14%
                    	       		H3A6P4              	51.16%
                    	       		H2ZWK6              	29.28%
                    	       		M3XHC6              	20.72%
Bootstrap support for Q5KP96 as seed ortholog is 96%.
Bootstrap support for H3B556 as seed ortholog is 96%.

Group of orthologs #72. Best score 765 bits
Score difference with first non-orthologous sequence - C.neoformans:411 L.chalumnae:164

Q5KM62              	100.00%		H3AGU3              	100.00%
                    	       		H3BI79              	56.40%
                    	       		H3BI74              	55.45%
                    	       		H3AF19              	54.50%
                    	       		H3BI69              	54.03%
                    	       		H3AW62              	49.29%
                    	       		H3BF86              	32.70%
                    	       		H2ZYC4              	15.64%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for H3AGU3 as seed ortholog is 100%.

Group of orthologs #73. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:203 L.chalumnae:159

Q5KKE7              	100.00%		H3A7C7              	100.00%
                    	       		H3B4P9              	89.04%
                    	       		H3A954              	88.36%
                    	       		H3ASR3              	85.62%
                    	       		H3AS44              	70.55%
                    	       		H3A580              	50.00%
                    	       		H3AGW1              	38.36%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for H3A7C7 as seed ortholog is 100%.

Group of orthologs #74. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:763 L.chalumnae:330

Q5KBX3              	100.00%		H3BGD8              	100.00%
Bootstrap support for Q5KBX3 as seed ortholog is 100%.
Bootstrap support for H3BGD8 as seed ortholog is 100%.

Group of orthologs #75. Best score 762 bits
Score difference with first non-orthologous sequence - C.neoformans:559 L.chalumnae:465

P0CO16              	100.00%		H3AJK7              	100.00%
Bootstrap support for P0CO16 as seed ortholog is 100%.
Bootstrap support for H3AJK7 as seed ortholog is 100%.

Group of orthologs #76. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:759 L.chalumnae:759

Q5KQ47              	100.00%		H2ZYP0              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for H2ZYP0 as seed ortholog is 100%.

Group of orthologs #77. Best score 757 bits
Score difference with first non-orthologous sequence - C.neoformans:757 L.chalumnae:757

Q5KGH2              	100.00%		H3AKR8              	100.00%
Bootstrap support for Q5KGH2 as seed ortholog is 100%.
Bootstrap support for H3AKR8 as seed ortholog is 100%.

Group of orthologs #78. Best score 755 bits
Score difference with first non-orthologous sequence - C.neoformans:755 L.chalumnae:162

Q5KHP4              	100.00%		H3A8H4              	100.00%
                    	       		H3A979              	41.84%
                    	       		H3B961              	30.52%
Bootstrap support for Q5KHP4 as seed ortholog is 100%.
Bootstrap support for H3A8H4 as seed ortholog is 80%.

Group of orthologs #79. Best score 749 bits
Score difference with first non-orthologous sequence - C.neoformans:749 L.chalumnae:121

P0CN30              	100.00%		H3B696              	100.00%
                    	       		H3A0X9              	29.70%
                    	       		H3B6F8              	10.89%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for H3B696 as seed ortholog is 99%.

Group of orthologs #80. Best score 749 bits
Score difference with first non-orthologous sequence - C.neoformans:749 L.chalumnae:571

Q5KQ62              	100.00%		H3B8T1              	100.00%
Bootstrap support for Q5KQ62 as seed ortholog is 100%.
Bootstrap support for H3B8T1 as seed ortholog is 100%.

Group of orthologs #81. Best score 746 bits
Score difference with first non-orthologous sequence - C.neoformans:746 L.chalumnae:746

Q5KFB9              	100.00%		H2ZRK0              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for H2ZRK0 as seed ortholog is 100%.

Group of orthologs #82. Best score 742 bits
Score difference with first non-orthologous sequence - C.neoformans:742 L.chalumnae:742

Q5KII0              	100.00%		H3A6Q5              	100.00%
                    	       		H3BG06              	45.11%
                    	       		H3B5P0              	40.55%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for H3A6Q5 as seed ortholog is 100%.

Group of orthologs #83. Best score 740 bits
Score difference with first non-orthologous sequence - C.neoformans:684 L.chalumnae:740

Q5KEF7              	100.00%		H2ZWC7              	100.00%
                    	       		H3BDM8              	25.19%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for H2ZWC7 as seed ortholog is 100%.

Group of orthologs #84. Best score 738 bits
Score difference with first non-orthologous sequence - C.neoformans:278 L.chalumnae:255

Q5K8W5              	100.00%		H3AL07              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 100%.
Bootstrap support for H3AL07 as seed ortholog is 100%.

Group of orthologs #85. Best score 738 bits
Score difference with first non-orthologous sequence - C.neoformans:504 L.chalumnae:738

Q5KKH8              	100.00%		H3AIZ6              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for H3AIZ6 as seed ortholog is 100%.

Group of orthologs #86. Best score 733 bits
Score difference with first non-orthologous sequence - C.neoformans:733 L.chalumnae:245

Q5KNG1              	100.00%		H3B0I6              	100.00%
                    	       		H3AKR4              	34.86%
Bootstrap support for Q5KNG1 as seed ortholog is 100%.
Bootstrap support for H3B0I6 as seed ortholog is 99%.

Group of orthologs #87. Best score 732 bits
Score difference with first non-orthologous sequence - C.neoformans:732 L.chalumnae:732

Q5KJT2              	100.00%		H3ARS4              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for H3ARS4 as seed ortholog is 100%.

Group of orthologs #88. Best score 723 bits
Score difference with first non-orthologous sequence - C.neoformans:723 L.chalumnae:723

Q5K7B4              	100.00%		M3XI54              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for M3XI54 as seed ortholog is 100%.

Group of orthologs #89. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:419 L.chalumnae:349

Q5K8Q3              	100.00%		H3AHX2              	100.00%
                    	       		H3AEX1              	20.19%
Bootstrap support for Q5K8Q3 as seed ortholog is 100%.
Bootstrap support for H3AHX2 as seed ortholog is 100%.

Group of orthologs #90. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:722 L.chalumnae:400

P0CO18              	100.00%		H3AHV5              	100.00%
Bootstrap support for P0CO18 as seed ortholog is 100%.
Bootstrap support for H3AHV5 as seed ortholog is 100%.

Group of orthologs #91. Best score 719 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:455

Q5K906              	100.00%		H3A0V7              	100.00%
Q5KDA3              	99.60%		H3BCT1              	65.30%
Bootstrap support for Q5K906 as seed ortholog is 87%.
Bootstrap support for H3A0V7 as seed ortholog is 100%.

Group of orthologs #92. Best score 713 bits
Score difference with first non-orthologous sequence - C.neoformans:713 L.chalumnae:713

Q5KAX5              	100.00%		H3AHD8              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for H3AHD8 as seed ortholog is 100%.

Group of orthologs #93. Best score 713 bits
Score difference with first non-orthologous sequence - C.neoformans:713 L.chalumnae:713

Q5KNE3              	100.00%		H3A4D6              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for H3A4D6 as seed ortholog is 100%.

Group of orthologs #94. Best score 709 bits
Score difference with first non-orthologous sequence - C.neoformans:709 L.chalumnae:653

P0CO10              	100.00%		H2ZV38              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for H2ZV38 as seed ortholog is 100%.

Group of orthologs #95. Best score 707 bits
Score difference with first non-orthologous sequence - C.neoformans:558 L.chalumnae:707

Q5KIF1              	100.00%		H3AXA5              	100.00%
                    	       		H3AWA2              	42.90%
                    	       		H2ZW02              	15.51%
                    	       		H3B7S7              	9.26%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for H3AXA5 as seed ortholog is 100%.

Group of orthologs #96. Best score 706 bits
Score difference with first non-orthologous sequence - C.neoformans:706 L.chalumnae:96

Q5KP06              	100.00%		H3BBJ9              	100.00%
                    	       		H2ZUX4              	54.55%
                    	       		H3A754              	40.00%
                    	       		H3AUT1              	29.09%
                    	       		H3AVL6              	27.27%
                    	       		H3A626              	21.82%
                    	       		H3A440              	14.55%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for H3BBJ9 as seed ortholog is 99%.

Group of orthologs #97. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:704 L.chalumnae:639

Q5KP40              	100.00%		H3A857              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for H3A857 as seed ortholog is 100%.

Group of orthologs #98. Best score 701 bits
Score difference with first non-orthologous sequence - C.neoformans:701 L.chalumnae:701

Q5KLX6              	100.00%		H3AJC2              	100.00%
Bootstrap support for Q5KLX6 as seed ortholog is 100%.
Bootstrap support for H3AJC2 as seed ortholog is 100%.

Group of orthologs #99. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 L.chalumnae:700

Q5KAT3              	100.00%		M3XIT6              	100.00%
                    	       		H3BEI0              	41.16%
Bootstrap support for Q5KAT3 as seed ortholog is 100%.
Bootstrap support for M3XIT6 as seed ortholog is 100%.

Group of orthologs #100. Best score 700 bits
Score difference with first non-orthologous sequence - C.neoformans:700 L.chalumnae:700

Q5KL42              	100.00%		H3B4J0              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for H3B4J0 as seed ortholog is 100%.

Group of orthologs #101. Best score 698 bits
Score difference with first non-orthologous sequence - C.neoformans:698 L.chalumnae:698

Q5KK44              	100.00%		H3ASK0              	100.00%
Q5KK43              	44.16%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for H3ASK0 as seed ortholog is 100%.

Group of orthologs #102. Best score 698 bits
Score difference with first non-orthologous sequence - C.neoformans:698 L.chalumnae:698

Q5KNL1              	100.00%		H2ZTG6              	100.00%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for H2ZTG6 as seed ortholog is 100%.

Group of orthologs #103. Best score 692 bits
Score difference with first non-orthologous sequence - C.neoformans:445 L.chalumnae:320

P0CQ98              	100.00%		H3AHA1              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for H3AHA1 as seed ortholog is 100%.

Group of orthologs #104. Best score 691 bits
Score difference with first non-orthologous sequence - C.neoformans:691 L.chalumnae:691

Q5KGM7              	100.00%		H3ANL6              	100.00%
Bootstrap support for Q5KGM7 as seed ortholog is 100%.
Bootstrap support for H3ANL6 as seed ortholog is 100%.

Group of orthologs #105. Best score 690 bits
Score difference with first non-orthologous sequence - C.neoformans:690 L.chalumnae:690

Q5KPI3              	100.00%		H3APY1              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for H3APY1 as seed ortholog is 100%.

Group of orthologs #106. Best score 690 bits
Score difference with first non-orthologous sequence - C.neoformans:690 L.chalumnae:690

Q5KID7              	100.00%		H3B1D6              	100.00%
Bootstrap support for Q5KID7 as seed ortholog is 100%.
Bootstrap support for H3B1D6 as seed ortholog is 100%.

Group of orthologs #107. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:688 L.chalumnae:136

P0CP00              	100.00%		H3AAN7              	100.00%
                    	       		H3AP83              	47.11%
                    	       		H2ZSM1              	24.33%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for H3AAN7 as seed ortholog is 98%.

Group of orthologs #108. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:688 L.chalumnae:411

Q5KLP9              	100.00%		H3ALM5              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for H3ALM5 as seed ortholog is 100%.

Group of orthologs #109. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 L.chalumnae:686

P0CO08              	100.00%		H3A2A4              	100.00%
Bootstrap support for P0CO08 as seed ortholog is 100%.
Bootstrap support for H3A2A4 as seed ortholog is 100%.

Group of orthologs #110. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:170

Q5KMH9              	100.00%		H3B694              	100.00%
Bootstrap support for Q5KMH9 as seed ortholog is 99%.
Bootstrap support for H3B694 as seed ortholog is 99%.

Group of orthologs #111. Best score 685 bits
Score difference with first non-orthologous sequence - C.neoformans:685 L.chalumnae:685

Q5KNM9              	100.00%		H3B4J9              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for H3B4J9 as seed ortholog is 100%.

Group of orthologs #112. Best score 684 bits
Score difference with first non-orthologous sequence - C.neoformans:684 L.chalumnae:601

Q5KDD4              	100.00%		H3AB34              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for H3AB34 as seed ortholog is 100%.

Group of orthologs #113. Best score 682 bits
Score difference with first non-orthologous sequence - C.neoformans:284 L.chalumnae:349

Q5KKP2              	100.00%		H3AXC2              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 100%.
Bootstrap support for H3AXC2 as seed ortholog is 100%.

Group of orthologs #114. Best score 679 bits
Score difference with first non-orthologous sequence - C.neoformans:320 L.chalumnae:287

Q5KLI4              	100.00%		H3A7G0              	100.00%
                    	       		H3A9W0              	41.38%
Bootstrap support for Q5KLI4 as seed ortholog is 100%.
Bootstrap support for H3A7G0 as seed ortholog is 100%.

Group of orthologs #115. Best score 679 bits
Score difference with first non-orthologous sequence - C.neoformans:679 L.chalumnae:679

Q5KNE7              	100.00%		H3BAM6              	100.00%
Bootstrap support for Q5KNE7 as seed ortholog is 100%.
Bootstrap support for H3BAM6 as seed ortholog is 100%.

Group of orthologs #116. Best score 678 bits
Score difference with first non-orthologous sequence - C.neoformans:678 L.chalumnae:270

Q5K8H1              	100.00%		H3AYI8              	100.00%
Bootstrap support for Q5K8H1 as seed ortholog is 100%.
Bootstrap support for H3AYI8 as seed ortholog is 100%.

Group of orthologs #117. Best score 677 bits
Score difference with first non-orthologous sequence - C.neoformans:677 L.chalumnae:617

Q5KE94              	100.00%		H3BFD1              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for H3BFD1 as seed ortholog is 100%.

Group of orthologs #118. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 L.chalumnae:672

Q5KFT2              	100.00%		H3BGX8              	100.00%
Bootstrap support for Q5KFT2 as seed ortholog is 100%.
Bootstrap support for H3BGX8 as seed ortholog is 100%.

Group of orthologs #119. Best score 670 bits
Score difference with first non-orthologous sequence - C.neoformans:670 L.chalumnae:670

Q5KM80              	100.00%		H2ZU93              	100.00%
                    	       		H3B892              	38.83%
Bootstrap support for Q5KM80 as seed ortholog is 100%.
Bootstrap support for H2ZU93 as seed ortholog is 100%.

Group of orthologs #120. Best score 670 bits
Score difference with first non-orthologous sequence - C.neoformans:353 L.chalumnae:670

Q5KGN2              	100.00%		H3B286              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 100%.
Bootstrap support for H3B286 as seed ortholog is 100%.

Group of orthologs #121. Best score 668 bits
Score difference with first non-orthologous sequence - C.neoformans:668 L.chalumnae:232

Q5KJ87              	100.00%		H3BIH2              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for H3BIH2 as seed ortholog is 100%.

Group of orthologs #122. Best score 667 bits
Score difference with first non-orthologous sequence - C.neoformans:667 L.chalumnae:667

Q5K6X3              	100.00%		H2ZW51              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for H2ZW51 as seed ortholog is 100%.

Group of orthologs #123. Best score 664 bits
Score difference with first non-orthologous sequence - C.neoformans:664 L.chalumnae:664

Q5KI75              	100.00%		H3B7N0              	100.00%
                    	       		H3B8Y9              	49.49%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for H3B7N0 as seed ortholog is 100%.

Group of orthologs #124. Best score 663 bits
Score difference with first non-orthologous sequence - C.neoformans:663 L.chalumnae:663

Q5KI64              	100.00%		H3AD90              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for H3AD90 as seed ortholog is 100%.

Group of orthologs #125. Best score 662 bits
Score difference with first non-orthologous sequence - C.neoformans:662 L.chalumnae:68

Q5KKP9              	100.00%		H3AXY1              	100.00%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for H3AXY1 as seed ortholog is 73%.
Alternative seed ortholog is H3ARW8 (68 bits away from this cluster)

Group of orthologs #126. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 L.chalumnae:446

Q5KGS9              	100.00%		H3BC00              	100.00%
                    	       		M3XGJ9              	6.14%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for H3BC00 as seed ortholog is 100%.

Group of orthologs #127. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 L.chalumnae:597

Q5KBI1              	100.00%		H3BHY3              	100.00%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for H3BHY3 as seed ortholog is 100%.

Group of orthologs #128. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 L.chalumnae:579

Q5KKR7              	100.00%		H3B8A6              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for H3B8A6 as seed ortholog is 100%.

Group of orthologs #129. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:659 L.chalumnae:659

Q5KLI3              	100.00%		H3BCM2              	100.00%
                    	       		H3A4H8              	20.55%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for H3BCM2 as seed ortholog is 100%.

Group of orthologs #130. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:657 L.chalumnae:657

Q5K9R3              	100.00%		H3AZU8              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for H3AZU8 as seed ortholog is 100%.

Group of orthologs #131. Best score 655 bits
Score difference with first non-orthologous sequence - C.neoformans:655 L.chalumnae:655

Q5KBW0              	100.00%		H3BB48              	100.00%
                    	       		H3A405              	15.24%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for H3BB48 as seed ortholog is 100%.

Group of orthologs #132. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 L.chalumnae:654

Q5KBL4              	100.00%		M3XIE8              	100.00%
Bootstrap support for Q5KBL4 as seed ortholog is 100%.
Bootstrap support for M3XIE8 as seed ortholog is 100%.

Group of orthologs #133. Best score 652 bits
Score difference with first non-orthologous sequence - C.neoformans:652 L.chalumnae:652

Q5KLU5              	100.00%		H2ZU31              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for H2ZU31 as seed ortholog is 100%.

Group of orthologs #134. Best score 648 bits
Score difference with first non-orthologous sequence - C.neoformans:458 L.chalumnae:453

P0CQ72              	100.00%		H2ZRV2              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for H2ZRV2 as seed ortholog is 100%.

Group of orthologs #135. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 L.chalumnae:646

Q5KAN4              	100.00%		H3AZ82              	100.00%
                    	       		H3BIK9              	42.47%
                    	       		H3B2X1              	28.17%
Bootstrap support for Q5KAN4 as seed ortholog is 100%.
Bootstrap support for H3AZ82 as seed ortholog is 100%.

Group of orthologs #136. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 L.chalumnae:646

Q5KEU7              	100.00%		H3AHS7              	100.00%
Bootstrap support for Q5KEU7 as seed ortholog is 100%.
Bootstrap support for H3AHS7 as seed ortholog is 100%.

Group of orthologs #137. Best score 644 bits
Score difference with first non-orthologous sequence - C.neoformans:644 L.chalumnae:644

Q5KML2              	100.00%		H3B728              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for H3B728 as seed ortholog is 100%.

Group of orthologs #138. Best score 643 bits
Score difference with first non-orthologous sequence - C.neoformans:643 L.chalumnae:391

Q5K7N5              	100.00%		H3B172              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for H3B172 as seed ortholog is 100%.

Group of orthologs #139. Best score 640 bits
Score difference with first non-orthologous sequence - C.neoformans:640 L.chalumnae:594

Q5K9H1              	100.00%		H3AM02              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for H3AM02 as seed ortholog is 100%.

Group of orthologs #140. Best score 640 bits
Score difference with first non-orthologous sequence - C.neoformans:640 L.chalumnae:640

Q5K9K1              	100.00%		H3AQ45              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for H3AQ45 as seed ortholog is 100%.

Group of orthologs #141. Best score 640 bits
Score difference with first non-orthologous sequence - C.neoformans:640 L.chalumnae:640

Q5KBV2              	100.00%		H3AQ97              	100.00%
Bootstrap support for Q5KBV2 as seed ortholog is 100%.
Bootstrap support for H3AQ97 as seed ortholog is 100%.

Group of orthologs #142. Best score 639 bits
Score difference with first non-orthologous sequence - C.neoformans:639 L.chalumnae:639

Q5KD08              	100.00%		H3A3L5              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for H3A3L5 as seed ortholog is 100%.

Group of orthologs #143. Best score 639 bits
Score difference with first non-orthologous sequence - C.neoformans:358 L.chalumnae:413

Q5K9Z4              	100.00%		H3AKC7              	100.00%
Bootstrap support for Q5K9Z4 as seed ortholog is 100%.
Bootstrap support for H3AKC7 as seed ortholog is 100%.

Group of orthologs #144. Best score 637 bits
Score difference with first non-orthologous sequence - C.neoformans:431 L.chalumnae:403

Q5KE58              	100.00%		H3AYD3              	100.00%
Bootstrap support for Q5KE58 as seed ortholog is 100%.
Bootstrap support for H3AYD3 as seed ortholog is 100%.

Group of orthologs #145. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:575 L.chalumnae:401

Q5KPQ9              	100.00%		H3AZF1              	100.00%
                    	       		H3AKS0              	30.99%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for H3AZF1 as seed ortholog is 100%.

Group of orthologs #146. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:351 L.chalumnae:523

Q5KDL3              	100.00%		H2ZZK0              	100.00%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for H2ZZK0 as seed ortholog is 100%.

Group of orthologs #147. Best score 634 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:97

Q5KKV8              	100.00%		H3AND9              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 90%.
Bootstrap support for H3AND9 as seed ortholog is 98%.

Group of orthologs #148. Best score 633 bits
Score difference with first non-orthologous sequence - C.neoformans:633 L.chalumnae:633

Q5KFG6              	100.00%		H3BBR0              	100.00%
Bootstrap support for Q5KFG6 as seed ortholog is 100%.
Bootstrap support for H3BBR0 as seed ortholog is 100%.

Group of orthologs #149. Best score 633 bits
Score difference with first non-orthologous sequence - C.neoformans:633 L.chalumnae:633

Q5KMW1              	100.00%		H3BE66              	100.00%
Bootstrap support for Q5KMW1 as seed ortholog is 100%.
Bootstrap support for H3BE66 as seed ortholog is 100%.

Group of orthologs #150. Best score 631 bits
Score difference with first non-orthologous sequence - C.neoformans:631 L.chalumnae:485

Q5K8D2              	100.00%		H3AGD0              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for H3AGD0 as seed ortholog is 100%.

Group of orthologs #151. Best score 630 bits
Score difference with first non-orthologous sequence - C.neoformans:447 L.chalumnae:231

Q5K745              	100.00%		H3A1J5              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for H3A1J5 as seed ortholog is 100%.

Group of orthologs #152. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:573 L.chalumnae:56

Q5KN48              	100.00%		H3AW63              	100.00%
                    	       		H3BGN7              	16.62%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for H3AW63 as seed ortholog is 89%.

Group of orthologs #153. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:629 L.chalumnae:390

Q5KFJ3              	100.00%		H3A672              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for H3A672 as seed ortholog is 100%.

Group of orthologs #154. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:385 L.chalumnae:211

Q5KAU0              	100.00%		M3XI24              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 100%.
Bootstrap support for M3XI24 as seed ortholog is 100%.

Group of orthologs #155. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 L.chalumnae:101

Q5KCZ4              	100.00%		M3XK23              	100.00%
                    	       		M3XJ18              	39.90%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for M3XK23 as seed ortholog is 98%.

Group of orthologs #156. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:572 L.chalumnae:626

P0CS34              	100.00%		H3B133              	100.00%
Bootstrap support for P0CS34 as seed ortholog is 100%.
Bootstrap support for H3B133 as seed ortholog is 100%.

Group of orthologs #157. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 L.chalumnae:626

Q5KLA1              	100.00%		H3B2Y2              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for H3B2Y2 as seed ortholog is 100%.

Group of orthologs #158. Best score 625 bits
Score difference with first non-orthologous sequence - C.neoformans:625 L.chalumnae:625

Q5KIL6              	100.00%		H3AQ71              	100.00%
Bootstrap support for Q5KIL6 as seed ortholog is 100%.
Bootstrap support for H3AQ71 as seed ortholog is 100%.

Group of orthologs #159. Best score 623 bits
Score difference with first non-orthologous sequence - C.neoformans:623 L.chalumnae:623

Q5KIH6              	100.00%		H3B206              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for H3B206 as seed ortholog is 100%.

Group of orthologs #160. Best score 621 bits
Score difference with first non-orthologous sequence - C.neoformans:621 L.chalumnae:546

Q5K8L8              	100.00%		H3B2R7              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for H3B2R7 as seed ortholog is 100%.

Group of orthologs #161. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:619 L.chalumnae:619

Q5K9B2              	100.00%		H3B705              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for H3B705 as seed ortholog is 100%.

Group of orthologs #162. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:341 L.chalumnae:371

P0CQ88              	100.00%		H3BBN1              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 100%.
Bootstrap support for H3BBN1 as seed ortholog is 100%.

Group of orthologs #163. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:619 L.chalumnae:619

P0CR28              	100.00%		H3BEP4              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for H3BEP4 as seed ortholog is 100%.

Group of orthologs #164. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:617 L.chalumnae:617

Q5KCZ2              	100.00%		H3A550              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for H3A550 as seed ortholog is 100%.

Group of orthologs #165. Best score 616 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:616

Q5KAP2              	100.00%		H3AQX3              	100.00%
Bootstrap support for Q5KAP2 as seed ortholog is 100%.
Bootstrap support for H3AQX3 as seed ortholog is 100%.

Group of orthologs #166. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:311 L.chalumnae:356

P0CQ84              	100.00%		H3B659              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for H3B659 as seed ortholog is 100%.

Group of orthologs #167. Best score 607 bits
Score difference with first non-orthologous sequence - C.neoformans:347 L.chalumnae:353

Q5KIC0              	100.00%		H3BI64              	100.00%
                    	       		H3ADK4              	76.64%
                    	       		H3A9B9              	67.83%
                    	       		H3AUN5              	66.55%
Bootstrap support for Q5KIC0 as seed ortholog is 99%.
Bootstrap support for H3BI64 as seed ortholog is 100%.

Group of orthologs #168. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:606 L.chalumnae:606

Q5KIF6              	100.00%		H3A1U0              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for H3A1U0 as seed ortholog is 100%.

Group of orthologs #169. Best score 605 bits
Score difference with first non-orthologous sequence - C.neoformans:605 L.chalumnae:509

Q5K6Z8              	100.00%		H3AXM1              	100.00%
Bootstrap support for Q5K6Z8 as seed ortholog is 100%.
Bootstrap support for H3AXM1 as seed ortholog is 100%.

Group of orthologs #170. Best score 602 bits
Score difference with first non-orthologous sequence - C.neoformans:406 L.chalumnae:411

P0CQ70              	100.00%		H3BEF1              	100.00%
                    	       		H3A6E9              	54.07%
                    	       		H3A1W8              	47.85%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for H3BEF1 as seed ortholog is 100%.

Group of orthologs #171. Best score 602 bits
Score difference with first non-orthologous sequence - C.neoformans:602 L.chalumnae:602

P0CM96              	100.00%		H3AAK0              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for H3AAK0 as seed ortholog is 100%.

Group of orthologs #172. Best score 602 bits
Score difference with first non-orthologous sequence - C.neoformans:602 L.chalumnae:411

Q5KNR6              	100.00%		H3B2F0              	100.00%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for H3B2F0 as seed ortholog is 100%.

Group of orthologs #173. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 L.chalumnae:558

Q5K7B5              	100.00%		H2ZUS7              	100.00%
                    	       		H3AQY8              	42.38%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for H2ZUS7 as seed ortholog is 100%.

Group of orthologs #174. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 L.chalumnae:601

Q5KMJ4              	100.00%		H3B5D7              	100.00%
                    	       		H3A988              	37.78%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for H3B5D7 as seed ortholog is 100%.

Group of orthologs #175. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:600 L.chalumnae:600

Q5KHN4              	100.00%		H3AVW4              	100.00%
                    	       		H3AXA8              	23.69%
                    	       		H3AXN8              	21.52%
Bootstrap support for Q5KHN4 as seed ortholog is 100%.
Bootstrap support for H3AVW4 as seed ortholog is 100%.

Group of orthologs #176. Best score 599 bits
Score difference with first non-orthologous sequence - C.neoformans:599 L.chalumnae:126

Q5KKT5              	100.00%		H3BFE7              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for H3BFE7 as seed ortholog is 98%.

Group of orthologs #177. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:140

Q5KK89              	100.00%		H3A7R5              	100.00%
                    	       		H2ZUU1              	52.79%
Bootstrap support for Q5KK89 as seed ortholog is 99%.
Bootstrap support for H3A7R5 as seed ortholog is 99%.

Group of orthologs #178. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:597 L.chalumnae:597

Q5KLW7              	100.00%		H3B646              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for H3B646 as seed ortholog is 100%.

Group of orthologs #179. Best score 594 bits
Score difference with first non-orthologous sequence - C.neoformans:594 L.chalumnae:594

P0CO94              	100.00%		H3AHL0              	100.00%
Bootstrap support for P0CO94 as seed ortholog is 100%.
Bootstrap support for H3AHL0 as seed ortholog is 100%.

Group of orthologs #180. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:322 L.chalumnae:224

P0CQ76              	100.00%		H3ACR9              	100.00%
                    	       		H3B5A9              	13.63%
Bootstrap support for P0CQ76 as seed ortholog is 100%.
Bootstrap support for H3ACR9 as seed ortholog is 100%.

Group of orthologs #181. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:592 L.chalumnae:592

Q5KDR3              	100.00%		H2ZYQ9              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for H2ZYQ9 as seed ortholog is 100%.

Group of orthologs #182. Best score 590 bits
Score difference with first non-orthologous sequence - C.neoformans:590 L.chalumnae:590

Q5KBB1              	100.00%		H3B9Q4              	100.00%
                    	       		H3ACZ9              	52.76%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for H3B9Q4 as seed ortholog is 100%.

Group of orthologs #183. Best score 590 bits
Score difference with first non-orthologous sequence - C.neoformans:590 L.chalumnae:590

P0CQ22              	100.00%		H3A579              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for H3A579 as seed ortholog is 100%.

Group of orthologs #184. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 L.chalumnae:589

Q5KM37              	100.00%		H3B8M2              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for H3B8M2 as seed ortholog is 100%.

Group of orthologs #185. Best score 588 bits
Score difference with first non-orthologous sequence - C.neoformans:588 L.chalumnae:588

Q5KJR9              	100.00%		H3A5F9              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for H3A5F9 as seed ortholog is 100%.

Group of orthologs #186. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:425 L.chalumnae:345

P0CQ96              	100.00%		H3B5C3              	100.00%
                    	       		H2ZY90              	45.56%
Bootstrap support for P0CQ96 as seed ortholog is 100%.
Bootstrap support for H3B5C3 as seed ortholog is 100%.

Group of orthologs #187. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:587 L.chalumnae:587

Q5K7K5              	100.00%		H3BHN2              	100.00%
                    	       		H3AV76              	50.71%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for H3BHN2 as seed ortholog is 100%.

Group of orthologs #188. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:587 L.chalumnae:587

Q5KQ45              	100.00%		H3BI66              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for H3BI66 as seed ortholog is 100%.

Group of orthologs #189. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:586 L.chalumnae:586

Q5K9Q6              	100.00%		H3B112              	100.00%
                    	       		H2ZSD2              	73.81%
Bootstrap support for Q5K9Q6 as seed ortholog is 100%.
Bootstrap support for H3B112 as seed ortholog is 100%.

Group of orthologs #190. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:586 L.chalumnae:144

Q5KNC4              	100.00%		H3A5T0              	100.00%
Bootstrap support for Q5KNC4 as seed ortholog is 100%.
Bootstrap support for H3A5T0 as seed ortholog is 99%.

Group of orthologs #191. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 L.chalumnae:585

Q5KIN6              	100.00%		H3ALP2              	100.00%
                    	       		H3BBB9              	100.00%
                    	       		H3B8J9              	25.25%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for H3ALP2 as seed ortholog is 100%.
Bootstrap support for H3BBB9 as seed ortholog is 100%.

Group of orthologs #192. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 L.chalumnae:585

Q5KMG4              	100.00%		H3B1E7              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for H3B1E7 as seed ortholog is 100%.

Group of orthologs #193. Best score 583 bits
Score difference with first non-orthologous sequence - C.neoformans:583 L.chalumnae:124

Q5KDW0              	100.00%		H3B1M4              	100.00%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for H3B1M4 as seed ortholog is 99%.

Group of orthologs #194. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:28

Q5KME1              	100.00%		H3AMP2              	100.00%
                    	       		H3AR00              	94.06%
                    	       		H3B6N4              	7.92%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for H3AMP2 as seed ortholog is 87%.

Group of orthologs #195. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 L.chalumnae:255

Q5KB93              	100.00%		H3AVR0              	100.00%
                    	       		H2ZZN2              	34.39%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for H3AVR0 as seed ortholog is 100%.

Group of orthologs #196. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 L.chalumnae:138

Q5KHZ4              	100.00%		H3ASY1              	100.00%
                    	       		H3ASS5              	48.63%
                    	       		H3A826              	45.70%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for H3ASY1 as seed ortholog is 99%.

Group of orthologs #197. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 L.chalumnae:428

Q5KP44              	100.00%		H3AIE0              	100.00%
                    	       		H3A423              	21.33%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for H3AIE0 as seed ortholog is 100%.

Group of orthologs #198. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:308 L.chalumnae:455

Q5KA27              	100.00%		H3BIM2              	100.00%
Bootstrap support for Q5KA27 as seed ortholog is 100%.
Bootstrap support for H3BIM2 as seed ortholog is 100%.

Group of orthologs #199. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:577 L.chalumnae:200

Q5K899              	100.00%		H3A521              	100.00%
Bootstrap support for Q5K899 as seed ortholog is 100%.
Bootstrap support for H3A521 as seed ortholog is 100%.

Group of orthologs #200. Best score 575 bits
Score difference with first non-orthologous sequence - C.neoformans:356 L.chalumnae:444

Q5KAC2              	100.00%		H3A5W6              	100.00%
                    	       		H3A6A5              	32.36%
                    	       		H3AQR5              	24.22%
Bootstrap support for Q5KAC2 as seed ortholog is 100%.
Bootstrap support for H3A5W6 as seed ortholog is 100%.

Group of orthologs #201. Best score 575 bits
Score difference with first non-orthologous sequence - C.neoformans:575 L.chalumnae:363

Q5KHR6              	100.00%		H3BHP5              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for H3BHP5 as seed ortholog is 100%.

Group of orthologs #202. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 L.chalumnae:574

P0CP36              	100.00%		H3APZ1              	100.00%
                    	       		H3B2U0              	100.00%
                    	       		H3AM64              	29.78%
Bootstrap support for P0CP36 as seed ortholog is 100%.
Bootstrap support for H3APZ1 as seed ortholog is 100%.
Bootstrap support for H3B2U0 as seed ortholog is 100%.

Group of orthologs #203. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 L.chalumnae:574

Q5KB97              	100.00%		H3AIW6              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for H3AIW6 as seed ortholog is 100%.

Group of orthologs #204. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 L.chalumnae:574

Q5KQ07              	100.00%		H3AGC7              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for H3AGC7 as seed ortholog is 100%.

Group of orthologs #205. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 L.chalumnae:569

Q5K757              	100.00%		H3BDT5              	100.00%
Bootstrap support for Q5K757 as seed ortholog is 100%.
Bootstrap support for H3BDT5 as seed ortholog is 100%.

Group of orthologs #206. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 L.chalumnae:37

Q5KLT9              	100.00%		H3B3T4              	100.00%
Bootstrap support for Q5KLT9 as seed ortholog is 100%.
Bootstrap support for H3B3T4 as seed ortholog is 89%.

Group of orthologs #207. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:567 L.chalumnae:567

Q5KF07              	100.00%		H3BGP1              	100.00%
                    	       		H3B242              	21.68%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for H3BGP1 as seed ortholog is 100%.

Group of orthologs #208. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:567 L.chalumnae:567

Q5KIW8              	100.00%		H2ZXA7              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for H2ZXA7 as seed ortholog is 100%.

Group of orthologs #209. Best score 566 bits
Score difference with first non-orthologous sequence - C.neoformans:389 L.chalumnae:337

P0CQ80              	100.00%		H3B5V2              	100.00%
                    	       		H3BC85              	100.00%
Bootstrap support for P0CQ80 as seed ortholog is 100%.
Bootstrap support for H3B5V2 as seed ortholog is 100%.
Bootstrap support for H3BC85 as seed ortholog is 100%.

Group of orthologs #210. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 L.chalumnae:7

Q5KC94              	100.00%		H3BIG5              	100.00%
                    	       		H3A192              	43.61%
                    	       		H3AF86              	33.44%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for H3BIG5 as seed ortholog is 48%.
Alternative seed ortholog is H3A063 (7 bits away from this cluster)

Group of orthologs #211. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:461

Q5KLA7              	100.00%		H3B7K3              	100.00%
                    	       		H3B528              	60.71%
                    	       		H2ZXR3              	24.68%
Bootstrap support for Q5KLA7 as seed ortholog is 99%.
Bootstrap support for H3B7K3 as seed ortholog is 100%.

Group of orthologs #212. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:560 L.chalumnae:221

Q5KMQ2              	100.00%		H3B5Y6              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for H3B5Y6 as seed ortholog is 99%.

Group of orthologs #213. Best score 559 bits
Score difference with first non-orthologous sequence - C.neoformans:131 L.chalumnae:269

Q5KGH3              	100.00%		H3BA28              	100.00%
                    	       		H3AMF8              	83.16%
Bootstrap support for Q5KGH3 as seed ortholog is 100%.
Bootstrap support for H3BA28 as seed ortholog is 100%.

Group of orthologs #214. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:303 L.chalumnae:304

Q5K7L0              	100.00%		H3APY0              	100.00%
                    	       		H3BA91              	50.40%
Bootstrap support for Q5K7L0 as seed ortholog is 100%.
Bootstrap support for H3APY0 as seed ortholog is 100%.

Group of orthologs #215. Best score 555 bits
Score difference with first non-orthologous sequence - C.neoformans:555 L.chalumnae:555

Q5KIZ9              	100.00%		H3BDS6              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for H3BDS6 as seed ortholog is 100%.

Group of orthologs #216. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 L.chalumnae:554

Q5KE09              	100.00%		H3BHP1              	100.00%
Bootstrap support for Q5KE09 as seed ortholog is 100%.
Bootstrap support for H3BHP1 as seed ortholog is 100%.

Group of orthologs #217. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 L.chalumnae:144

P0CL92              	100.00%		H2ZZW0              	100.00%
Bootstrap support for P0CL92 as seed ortholog is 100%.
Bootstrap support for H2ZZW0 as seed ortholog is 99%.

Group of orthologs #218. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:220

Q5K960              	100.00%		H3B9G0              	100.00%
Bootstrap support for Q5K960 as seed ortholog is 99%.
Bootstrap support for H3B9G0 as seed ortholog is 99%.

Group of orthologs #219. Best score 550 bits
Score difference with first non-orthologous sequence - C.neoformans:550 L.chalumnae:71

P0CQ16              	100.00%		H3B5F1              	100.00%
Bootstrap support for P0CQ16 as seed ortholog is 100%.
Bootstrap support for H3B5F1 as seed ortholog is 84%.

Group of orthologs #220. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 L.chalumnae:549

Q5KP62              	100.00%		H3A8E3              	100.00%
                    	       		H3A389              	54.24%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for H3A8E3 as seed ortholog is 100%.

Group of orthologs #221. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 L.chalumnae:549

Q5KBH1              	100.00%		H3AZP1              	100.00%
Bootstrap support for Q5KBH1 as seed ortholog is 100%.
Bootstrap support for H3AZP1 as seed ortholog is 100%.

Group of orthologs #222. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:484 L.chalumnae:441

P0CP46              	100.00%		H3AV53              	100.00%
                    	       		H3A5M3              	60.80%
                    	       		H3AA31              	41.97%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for H3AV53 as seed ortholog is 100%.

Group of orthologs #223. Best score 543 bits
Score difference with first non-orthologous sequence - C.neoformans:543 L.chalumnae:543

Q5KC69              	100.00%		H3AXW8              	100.00%
                    	       		H3BAN6              	30.87%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for H3AXW8 as seed ortholog is 100%.

Group of orthologs #224. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:541 L.chalumnae:174

Q5KKA5              	100.00%		H3B9W8              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for H3B9W8 as seed ortholog is 99%.

Group of orthologs #225. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:539 L.chalumnae:539

Q5KKV6              	100.00%		H3AFD7              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for H3AFD7 as seed ortholog is 100%.

Group of orthologs #226. Best score 538 bits
Score difference with first non-orthologous sequence - C.neoformans:538 L.chalumnae:240

Q5KAU9              	100.00%		H3AKB8              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for H3AKB8 as seed ortholog is 100%.

Group of orthologs #227. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 L.chalumnae:300

Q5KHV9              	100.00%		H3AEJ1              	100.00%
                    	       		H2ZZU9              	75.16%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for H3AEJ1 as seed ortholog is 100%.

Group of orthologs #228. Best score 536 bits
Score difference with first non-orthologous sequence - C.neoformans:536 L.chalumnae:536

Q5KG72              	100.00%		H3AH00              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for H3AH00 as seed ortholog is 100%.

Group of orthologs #229. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:535

Q5KHJ1              	100.00%		H3ANZ0              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 99%.
Bootstrap support for H3ANZ0 as seed ortholog is 100%.

Group of orthologs #230. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:535 L.chalumnae:535

Q5KI46              	100.00%		H3BHT6              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for H3BHT6 as seed ortholog is 100%.

Group of orthologs #231. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:534 L.chalumnae:534

Q5KF37              	100.00%		H3A2Q5              	100.00%
                    	       		H3BDM9              	75.50%
                    	       		H3B034              	73.78%
                    	       		H3AWC0              	72.62%
Bootstrap support for Q5KF37 as seed ortholog is 100%.
Bootstrap support for H3A2Q5 as seed ortholog is 100%.

Group of orthologs #232. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:291

Q5KGF6              	100.00%		H3AH77              	100.00%
                    	       		M3XJQ9              	100.00%
                    	       		H3B2M5              	65.94%
Bootstrap support for Q5KGF6 as seed ortholog is 72%.
Alternative seed ortholog is Q5K9H6 (41 bits away from this cluster)
Bootstrap support for H3AH77 as seed ortholog is 100%.
Bootstrap support for M3XJQ9 as seed ortholog is 99%.

Group of orthologs #233. Best score 533 bits
Score difference with first non-orthologous sequence - C.neoformans:533 L.chalumnae:533

Q5K7P1              	100.00%		H2ZSS1              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for H2ZSS1 as seed ortholog is 100%.

Group of orthologs #234. Best score 533 bits
Score difference with first non-orthologous sequence - C.neoformans:533 L.chalumnae:533

Q5KKE9              	100.00%		H3AMV4              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for H3AMV4 as seed ortholog is 100%.

Group of orthologs #235. Best score 531 bits
Score difference with first non-orthologous sequence - C.neoformans:531 L.chalumnae:210

Q5KIA2              	100.00%		H3ALV8              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for H3ALV8 as seed ortholog is 99%.

Group of orthologs #236. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 L.chalumnae:530

Q5KK90              	100.00%		H2ZZN4              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for H2ZZN4 as seed ortholog is 100%.

Group of orthologs #237. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:306 L.chalumnae:282

P0CQ74              	100.00%		H3AGK3              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for H3AGK3 as seed ortholog is 100%.

Group of orthologs #238. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:137

Q5KEX3              	100.00%		H3ATS6              	100.00%
                    	       		M3XGL4              	51.38%
                    	       		H3BEP7              	34.39%
                    	       		H3AUS8              	30.79%
Bootstrap support for Q5KEX3 as seed ortholog is 98%.
Bootstrap support for H3ATS6 as seed ortholog is 99%.

Group of orthologs #239. Best score 528 bits
Score difference with first non-orthologous sequence - C.neoformans:343 L.chalumnae:331

Q5KBN2              	100.00%		H3BGD6              	100.00%
Q5KIR5              	14.18%		
Bootstrap support for Q5KBN2 as seed ortholog is 100%.
Bootstrap support for H3BGD6 as seed ortholog is 100%.

Group of orthologs #240. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:524 L.chalumnae:524

Q5K7C3              	100.00%		H2ZW85              	100.00%
Bootstrap support for Q5K7C3 as seed ortholog is 100%.
Bootstrap support for H2ZW85 as seed ortholog is 100%.

Group of orthologs #241. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 L.chalumnae:380

Q5K722              	100.00%		H3A9P8              	100.00%
                    	       		H3AWQ6              	12.58%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for H3A9P8 as seed ortholog is 100%.

Group of orthologs #242. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:382 L.chalumnae:282

Q5KC30              	100.00%		H3AK78              	100.00%
                    	       		H2ZS69              	53.76%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for H3AK78 as seed ortholog is 100%.

Group of orthologs #243. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:516 L.chalumnae:365

Q5KDQ7              	100.00%		H3AI71              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for H3AI71 as seed ortholog is 100%.

Group of orthologs #244. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:17 L.chalumnae:220

Q5KCS8              	100.00%		H3AN71              	100.00%
Bootstrap support for Q5KCS8 as seed ortholog is 66%.
Alternative seed ortholog is Q5KF65 (17 bits away from this cluster)
Bootstrap support for H3AN71 as seed ortholog is 100%.

Group of orthologs #245. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:229 L.chalumnae:175

P0CR00              	100.00%		H3B1B6              	100.00%
Bootstrap support for P0CR00 as seed ortholog is 100%.
Bootstrap support for H3B1B6 as seed ortholog is 100%.

Group of orthologs #246. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:119

Q5KLG6              	100.00%		H2ZVT3              	100.00%
Bootstrap support for Q5KLG6 as seed ortholog is 85%.
Bootstrap support for H2ZVT3 as seed ortholog is 98%.

Group of orthologs #247. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 L.chalumnae:515

P0CR52              	100.00%		H3API7              	100.00%
Bootstrap support for P0CR52 as seed ortholog is 100%.
Bootstrap support for H3API7 as seed ortholog is 100%.

Group of orthologs #248. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 L.chalumnae:515

Q5KJX8              	100.00%		H3B7X4              	100.00%
Bootstrap support for Q5KJX8 as seed ortholog is 100%.
Bootstrap support for H3B7X4 as seed ortholog is 100%.

Group of orthologs #249. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:362 L.chalumnae:515

Q5KH38              	100.00%		H3BBS2              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for H3BBS2 as seed ortholog is 100%.

Group of orthologs #250. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 L.chalumnae:512

Q5KEN6              	100.00%		H3AL35              	100.00%
Bootstrap support for Q5KEN6 as seed ortholog is 100%.
Bootstrap support for H3AL35 as seed ortholog is 100%.

Group of orthologs #251. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 L.chalumnae:508

Q5KKG6              	100.00%		H3ATJ8              	100.00%
                    	       		H3AAG4              	52.43%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for H3ATJ8 as seed ortholog is 100%.

Group of orthologs #252. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 L.chalumnae:507

Q5K9E3              	100.00%		H3ABQ3              	100.00%
                    	       		H3AXY9              	41.72%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for H3ABQ3 as seed ortholog is 100%.

Group of orthologs #253. Best score 506 bits
Score difference with first non-orthologous sequence - C.neoformans:506 L.chalumnae:506

Q5KFU0              	100.00%		H3ALT2              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for H3ALT2 as seed ortholog is 100%.

Group of orthologs #254. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:505 L.chalumnae:105

Q5KPW4              	100.00%		H3B8R3              	100.00%
                    	       		H3AQ74              	77.69%
Bootstrap support for Q5KPW4 as seed ortholog is 100%.
Bootstrap support for H3B8R3 as seed ortholog is 99%.

Group of orthologs #255. Best score 504 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:179

Q5KAF1              	100.00%		H3B050              	100.00%
Bootstrap support for Q5KAF1 as seed ortholog is 84%.
Bootstrap support for H3B050 as seed ortholog is 99%.

Group of orthologs #256. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:503 L.chalumnae:503

Q5KGD7              	100.00%		H3B0T2              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for H3B0T2 as seed ortholog is 100%.

Group of orthologs #257. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:503 L.chalumnae:503

Q5KGH1              	100.00%		H3BEP0              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for H3BEP0 as seed ortholog is 100%.

Group of orthologs #258. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:502 L.chalumnae:502

Q5KE01              	100.00%		H3AYK6              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for H3AYK6 as seed ortholog is 100%.

Group of orthologs #259. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:276 L.chalumnae:355

Q5K9A8              	100.00%		H3B5L6              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 99%.
Bootstrap support for H3B5L6 as seed ortholog is 100%.

Group of orthologs #260. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 L.chalumnae:207

P0CR40              	100.00%		H3AC80              	100.00%
                    	       		H3B6C9              	12.53%
Bootstrap support for P0CR40 as seed ortholog is 100%.
Bootstrap support for H3AC80 as seed ortholog is 99%.

Group of orthologs #261. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 L.chalumnae:500

P0CR26              	100.00%		H3AYK7              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for H3AYK7 as seed ortholog is 100%.

Group of orthologs #262. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 L.chalumnae:416

Q5K9L7              	100.00%		H3A1S5              	100.00%
Q5KMG8              	28.25%		
Bootstrap support for Q5K9L7 as seed ortholog is 100%.
Bootstrap support for H3A1S5 as seed ortholog is 100%.

Group of orthologs #263. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:298 L.chalumnae:498

Q5KQ22              	100.00%		H3A9R5              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for H3A9R5 as seed ortholog is 100%.

Group of orthologs #264. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:402 L.chalumnae:498

Q5KHQ8              	100.00%		H3BBQ4              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for H3BBQ4 as seed ortholog is 100%.

Group of orthologs #265. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 L.chalumnae:497

Q5KAU8              	100.00%		H3BII8              	100.00%
                    	       		H3AND8              	9.12%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for H3BII8 as seed ortholog is 100%.

Group of orthologs #266. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 L.chalumnae:497

P0CM88              	100.00%		H3AIE9              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for H3AIE9 as seed ortholog is 100%.

Group of orthologs #267. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:496 L.chalumnae:496

Q5KEK9              	100.00%		H3BBQ3              	100.00%
                    	       		H3B0F5              	50.98%
                    	       		H3AYA8              	24.75%
Bootstrap support for Q5KEK9 as seed ortholog is 100%.
Bootstrap support for H3BBQ3 as seed ortholog is 100%.

Group of orthologs #268. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:495 L.chalumnae:495

Q5KB99              	100.00%		H3BFM4              	100.00%
                    	       		H3AHP8              	35.96%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for H3BFM4 as seed ortholog is 100%.

Group of orthologs #269. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:495 L.chalumnae:495

Q5KII4              	100.00%		M3XKA9              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for M3XKA9 as seed ortholog is 100%.

Group of orthologs #270. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:260 L.chalumnae:182

Q5KI40              	100.00%		H3AHF6              	100.00%
                    	       		H3B1Z2              	28.73%
Bootstrap support for Q5KI40 as seed ortholog is 100%.
Bootstrap support for H3AHF6 as seed ortholog is 100%.

Group of orthologs #271. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 L.chalumnae:242

Q5KLJ0              	100.00%		H3AB98              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for H3AB98 as seed ortholog is 100%.

Group of orthologs #272. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 L.chalumnae:48

Q5KE28              	100.00%		H3BA29              	100.00%
Bootstrap support for Q5KE28 as seed ortholog is 100%.
Bootstrap support for H3BA29 as seed ortholog is 91%.

Group of orthologs #273. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:340 L.chalumnae:319

Q5KMR8              	100.00%		H3AT64              	100.00%
                    	       		H3ACJ6              	40.38%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for H3AT64 as seed ortholog is 100%.

Group of orthologs #274. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:491 L.chalumnae:123

Q5KI86              	100.00%		H3BIP7              	100.00%
                    	       		H3B4Y1              	10.28%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for H3BIP7 as seed ortholog is 99%.

Group of orthologs #275. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:491 L.chalumnae:491

P0CP26              	100.00%		H3B4S4              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for H3B4S4 as seed ortholog is 100%.

Group of orthologs #276. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:249 L.chalumnae:266

P0CQ92              	100.00%		H3AU41              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for H3AU41 as seed ortholog is 100%.

Group of orthologs #277. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:485 L.chalumnae:401

Q5K9N8              	100.00%		H3A134              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for H3A134 as seed ortholog is 100%.

Group of orthologs #278. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:483 L.chalumnae:219

Q5KII9              	100.00%		H3BBH3              	100.00%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for H3BBH3 as seed ortholog is 100%.

Group of orthologs #279. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 L.chalumnae:482

Q5KER6              	100.00%		H3B3B5              	100.00%
                    	       		H3ABW4              	53.58%
Bootstrap support for Q5KER6 as seed ortholog is 100%.
Bootstrap support for H3B3B5 as seed ortholog is 100%.

Group of orthologs #280. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 L.chalumnae:482

Q5KF96              	100.00%		H3A2L8              	100.00%
Bootstrap support for Q5KF96 as seed ortholog is 100%.
Bootstrap support for H3A2L8 as seed ortholog is 100%.

Group of orthologs #281. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:404 L.chalumnae:103

Q5KJ82              	100.00%		H3A9D1              	100.00%
Bootstrap support for Q5KJ82 as seed ortholog is 100%.
Bootstrap support for H3A9D1 as seed ortholog is 98%.

Group of orthologs #282. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:398 L.chalumnae:352

Q5KJC6              	100.00%		H3B216              	100.00%
                    	       		H3B3N8              	57.48%
Bootstrap support for Q5KJC6 as seed ortholog is 100%.
Bootstrap support for H3B216 as seed ortholog is 100%.

Group of orthologs #283. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:479 L.chalumnae:479

Q5KM85              	100.00%		H3A0U7              	100.00%
                    	       		H3AEK6              	57.89%
                    	       		H3AGM4              	53.80%
Bootstrap support for Q5KM85 as seed ortholog is 100%.
Bootstrap support for H3A0U7 as seed ortholog is 100%.

Group of orthologs #284. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 L.chalumnae:404

P0CS36              	100.00%		H3AYF4              	100.00%
                    	       		H3AWK9              	46.19%
                    	       		H3B8M1              	35.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for H3AYF4 as seed ortholog is 100%.

Group of orthologs #285. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 L.chalumnae:477

Q5KAB5              	100.00%		H3A8T1              	100.00%
                    	       		H3BFX4              	36.36%
Bootstrap support for Q5KAB5 as seed ortholog is 100%.
Bootstrap support for H3A8T1 as seed ortholog is 100%.

Group of orthologs #286. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 L.chalumnae:347

Q5KF83              	100.00%		H3ACG3              	100.00%
                    	       		H3B2X6              	48.61%
Bootstrap support for Q5KF83 as seed ortholog is 100%.
Bootstrap support for H3ACG3 as seed ortholog is 100%.

Group of orthologs #287. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:477

Q5K9A0              	100.00%		H3AJ55              	100.00%
Bootstrap support for Q5K9A0 as seed ortholog is 99%.
Bootstrap support for H3AJ55 as seed ortholog is 100%.

Group of orthologs #288. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:477

Q5K8Q9              	100.00%		H3AKG0              	100.00%
Bootstrap support for Q5K8Q9 as seed ortholog is 93%.
Bootstrap support for H3AKG0 as seed ortholog is 100%.

Group of orthologs #289. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 L.chalumnae:477

Q5KHJ8              	100.00%		H3AQD0              	100.00%
Bootstrap support for Q5KHJ8 as seed ortholog is 100%.
Bootstrap support for H3AQD0 as seed ortholog is 100%.

Group of orthologs #290. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 L.chalumnae:476

Q5KCK2              	100.00%		H3BEC1              	100.00%
                    	       		H3ASC3              	26.95%
Bootstrap support for Q5KCK2 as seed ortholog is 100%.
Bootstrap support for H3BEC1 as seed ortholog is 100%.

Group of orthologs #291. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 L.chalumnae:475

Q5KFS5              	100.00%		H3A0G7              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for H3A0G7 as seed ortholog is 100%.

Group of orthologs #292. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:165 L.chalumnae:29

P0CN74              	100.00%		H3AST4              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 100%.
Bootstrap support for H3AST4 as seed ortholog is 68%.
Alternative seed ortholog is H3A702 (29 bits away from this cluster)

Group of orthologs #293. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:425 L.chalumnae:337

Q5KCJ8              	100.00%		H3B5L5              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for H3B5L5 as seed ortholog is 100%.

Group of orthologs #294. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 L.chalumnae:475

Q5KKJ5              	100.00%		H3BBC2              	100.00%
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for H3BBC2 as seed ortholog is 100%.

Group of orthologs #295. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 L.chalumnae:473

Q5KIA5              	100.00%		H3A0F5              	100.00%
Bootstrap support for Q5KIA5 as seed ortholog is 100%.
Bootstrap support for H3A0F5 as seed ortholog is 100%.

Group of orthologs #296. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:303 L.chalumnae:473

Q5K8Q2              	100.00%		H3B6I7              	100.00%
Bootstrap support for Q5K8Q2 as seed ortholog is 100%.
Bootstrap support for H3B6I7 as seed ortholog is 100%.

Group of orthologs #297. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:347 L.chalumnae:256

P0CO92              	100.00%		H3A2T5              	100.00%
Bootstrap support for P0CO92 as seed ortholog is 100%.
Bootstrap support for H3A2T5 as seed ortholog is 100%.

Group of orthologs #298. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:295 L.chalumnae:247

Q5KE89              	100.00%		H3B0G7              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 100%.
Bootstrap support for H3B0G7 as seed ortholog is 99%.

Group of orthologs #299. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:472 L.chalumnae:472

Q5KJI4              	100.00%		H3BDN1              	100.00%
Bootstrap support for Q5KJI4 as seed ortholog is 100%.
Bootstrap support for H3BDN1 as seed ortholog is 100%.

Group of orthologs #300. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 L.chalumnae:118

Q5KMG1              	100.00%		H3A5A8              	100.00%
Q5K8R8              	15.31%		
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for H3A5A8 as seed ortholog is 99%.

Group of orthologs #301. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 L.chalumnae:470

Q5KPT1              	100.00%		H3BCC7              	100.00%
                    	       		H3BCM1              	18.69%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for H3BCC7 as seed ortholog is 100%.

Group of orthologs #302. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:469 L.chalumnae:469

Q5KDZ3              	100.00%		H3AT29              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 100%.
Bootstrap support for H3AT29 as seed ortholog is 100%.

Group of orthologs #303. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:334 L.chalumnae:199

Q5KF69              	100.00%		H3A2F9              	100.00%
                    	       		H3A126              	27.71%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for H3A2F9 as seed ortholog is 100%.

Group of orthologs #304. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:468 L.chalumnae:468

Q5KL04              	100.00%		H3A4C1              	100.00%
Bootstrap support for Q5KL04 as seed ortholog is 100%.
Bootstrap support for H3A4C1 as seed ortholog is 100%.

Group of orthologs #305. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:241 L.chalumnae:201

Q5KDB7              	100.00%		H3BD04              	100.00%
Bootstrap support for Q5KDB7 as seed ortholog is 99%.
Bootstrap support for H3BD04 as seed ortholog is 99%.

Group of orthologs #306. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:467 L.chalumnae:467

P0CN84              	100.00%		H3B669              	100.00%
                    	       		H2ZW57              	51.74%
Bootstrap support for P0CN84 as seed ortholog is 100%.
Bootstrap support for H3B669 as seed ortholog is 100%.

Group of orthologs #307. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 L.chalumnae:466

Q5KFB7              	100.00%		H3A3R3              	100.00%
                    	       		H2ZY55              	41.46%
                    	       		H3AJP9              	35.97%
Bootstrap support for Q5KFB7 as seed ortholog is 100%.
Bootstrap support for H3A3R3 as seed ortholog is 100%.

Group of orthologs #308. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:410 L.chalumnae:466

Q5KMP0              	100.00%		H3B9I9              	100.00%
Bootstrap support for Q5KMP0 as seed ortholog is 100%.
Bootstrap support for H3B9I9 as seed ortholog is 100%.

Group of orthologs #309. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:361 L.chalumnae:193

Q5KP35              	100.00%		H3BDT7              	100.00%
Bootstrap support for Q5KP35 as seed ortholog is 100%.
Bootstrap support for H3BDT7 as seed ortholog is 100%.

Group of orthologs #310. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 L.chalumnae:410

Q5KKB4              	100.00%		H3AF78              	100.00%
                    	       		H3A6Y2              	17.83%
Bootstrap support for Q5KKB4 as seed ortholog is 100%.
Bootstrap support for H3AF78 as seed ortholog is 100%.

Group of orthologs #311. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:462 L.chalumnae:462

Q5KHN9              	100.00%		H3ATV4              	100.00%
Bootstrap support for Q5KHN9 as seed ortholog is 100%.
Bootstrap support for H3ATV4 as seed ortholog is 100%.

Group of orthologs #312. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 L.chalumnae:461

Q5KGI0              	100.00%		H3ATJ7              	100.00%
Bootstrap support for Q5KGI0 as seed ortholog is 100%.
Bootstrap support for H3ATJ7 as seed ortholog is 100%.

Group of orthologs #313. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 L.chalumnae:461

Q5KJ46              	100.00%		H3BEB4              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for H3BEB4 as seed ortholog is 100%.

Group of orthologs #314. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 L.chalumnae:460

P0CQ34              	100.00%		H2ZYA8              	100.00%
                    	       		H3BDJ1              	31.13%
                    	       		H3AR52              	22.74%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for H2ZYA8 as seed ortholog is 100%.

Group of orthologs #315. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 L.chalumnae:460

P0CS70              	100.00%		H3BG71              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for H3BG71 as seed ortholog is 100%.

Group of orthologs #316. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 L.chalumnae:460

Q5KML3              	100.00%		H3AZF0              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for H3AZF0 as seed ortholog is 100%.

Group of orthologs #317. Best score 457 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:457

Q5K9A9              	100.00%		H3AT42              	100.00%
                    	       		H3AWZ8              	41.67%
Bootstrap support for Q5K9A9 as seed ortholog is 97%.
Bootstrap support for H3AT42 as seed ortholog is 100%.

Group of orthologs #318. Best score 457 bits
Score difference with first non-orthologous sequence - C.neoformans:457 L.chalumnae:457

Q5K8F7              	100.00%		H3A776              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for H3A776 as seed ortholog is 100%.

Group of orthologs #319. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:456 L.chalumnae:456

P0CQ08              	100.00%		H3BHA3              	100.00%
Bootstrap support for P0CQ08 as seed ortholog is 100%.
Bootstrap support for H3BHA3 as seed ortholog is 100%.

Group of orthologs #320. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 L.chalumnae:453

Q5KNR0              	100.00%		H3AEL6              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for H3AEL6 as seed ortholog is 100%.

Group of orthologs #321. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 L.chalumnae:453

Q5K6V0              	100.00%		H3AYV1              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for H3AYV1 as seed ortholog is 100%.

Group of orthologs #322. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 L.chalumnae:453

Q5KF32              	100.00%		H3B5H5              	100.00%
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for H3B5H5 as seed ortholog is 100%.

Group of orthologs #323. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 L.chalumnae:31

Q5KKE3              	100.00%		H3AZP8              	100.00%
                    	       		H3BA09              	33.16%
                    	       		H3BG46              	6.55%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for H3AZP8 as seed ortholog is 73%.
Alternative seed ortholog is H3AFX2 (31 bits away from this cluster)

Group of orthologs #324. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 L.chalumnae:451

Q5KGV7              	100.00%		H2ZYJ0              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for H2ZYJ0 as seed ortholog is 100%.

Group of orthologs #325. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 L.chalumnae:85

Q5KLK8              	100.00%		H3BE26              	100.00%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for H3BE26 as seed ortholog is 87%.

Group of orthologs #326. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:11 L.chalumnae:130

Q5KFY6              	100.00%		H3AGW5              	100.00%
                    	       		H3A4Z0              	33.23%
Bootstrap support for Q5KFY6 as seed ortholog is 54%.
Alternative seed ortholog is Q5KHP3 (11 bits away from this cluster)
Bootstrap support for H3AGW5 as seed ortholog is 99%.

Group of orthologs #327. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:329 L.chalumnae:293

Q5KHS6              	100.00%		H3A660              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 100%.
Bootstrap support for H3A660 as seed ortholog is 100%.

Group of orthologs #328. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:174 L.chalumnae:448

Q5KDJ3              	100.00%		H3A259              	100.00%
                    	       		H3A1V4              	53.97%
Bootstrap support for Q5KDJ3 as seed ortholog is 99%.
Bootstrap support for H3A259 as seed ortholog is 100%.

Group of orthologs #329. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:152 L.chalumnae:161

Q5KBZ0              	100.00%		H3A561              	100.00%
Q5KIV9              	11.72%		
Bootstrap support for Q5KBZ0 as seed ortholog is 99%.
Bootstrap support for H3A561 as seed ortholog is 99%.

Group of orthologs #330. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:343 L.chalumnae:314

P0CS48              	100.00%		H2ZUG2              	100.00%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for H2ZUG2 as seed ortholog is 100%.

Group of orthologs #331. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:447 L.chalumnae:447

P0CO20              	100.00%		H3A703              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for H3A703 as seed ortholog is 100%.

Group of orthologs #332. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:354 L.chalumnae:302

Q5KEQ4              	100.00%		H3A2S9              	100.00%
                    	       		H3A9U2              	51.48%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for H3A2S9 as seed ortholog is 100%.

Group of orthologs #333. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:214 L.chalumnae:176

P0CO88              	100.00%		H3AFW6              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 100%.
Bootstrap support for H3AFW6 as seed ortholog is 100%.

Group of orthologs #334. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:445 L.chalumnae:445

Q5KKK6              	100.00%		H3A5R2              	100.00%
                    	       		H3AD44              	66.78%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for H3A5R2 as seed ortholog is 100%.

Group of orthologs #335. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:238 L.chalumnae:198

Q5KEJ1              	100.00%		H3ARG2              	100.00%
                    	       		H3AFV9              	66.33%
Bootstrap support for Q5KEJ1 as seed ortholog is 100%.
Bootstrap support for H3ARG2 as seed ortholog is 100%.

Group of orthologs #336. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:355 L.chalumnae:155

Q5K707              	100.00%		H3A8B9              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 100%.
Bootstrap support for H3A8B9 as seed ortholog is 100%.

Group of orthologs #337. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:443 L.chalumnae:443

Q5KMM8              	100.00%		H3A040              	100.00%
Bootstrap support for Q5KMM8 as seed ortholog is 100%.
Bootstrap support for H3A040 as seed ortholog is 100%.

Group of orthologs #338. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:443 L.chalumnae:443

Q5KKM6              	100.00%		M3XJ87              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for M3XJ87 as seed ortholog is 100%.

Group of orthologs #339. Best score 442 bits
Score difference with first non-orthologous sequence - C.neoformans:316 L.chalumnae:287

P0CS42              	100.00%		H3BFN2              	100.00%
Bootstrap support for P0CS42 as seed ortholog is 100%.
Bootstrap support for H3BFN2 as seed ortholog is 100%.

Group of orthologs #340. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:109

Q5KMR6              	100.00%		H3AI90              	100.00%
                    	       		H3A406              	64.25%
                    	       		H3BGB6              	52.36%
Bootstrap support for Q5KMR6 as seed ortholog is 99%.
Bootstrap support for H3AI90 as seed ortholog is 99%.

Group of orthologs #341. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 L.chalumnae:440

Q5KJP4              	100.00%		H2ZTY4              	100.00%
Bootstrap support for Q5KJP4 as seed ortholog is 100%.
Bootstrap support for H2ZTY4 as seed ortholog is 100%.

Group of orthologs #342. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:39 L.chalumnae:440

Q5K8E2              	100.00%		H3AGW8              	100.00%
Bootstrap support for Q5K8E2 as seed ortholog is 80%.
Bootstrap support for H3AGW8 as seed ortholog is 100%.

Group of orthologs #343. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:210

Q5KNC3              	100.00%		H3BBZ5              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 99%.
Bootstrap support for H3BBZ5 as seed ortholog is 100%.

Group of orthologs #344. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:211 L.chalumnae:185

Q5KJV0              	100.00%		H2ZZA6              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 100%.
Bootstrap support for H2ZZA6 as seed ortholog is 100%.

Group of orthologs #345. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 L.chalumnae:438

Q5KFJ7              	100.00%		H3B878              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for H3B878 as seed ortholog is 100%.

Group of orthologs #346. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 L.chalumnae:437

Q5KHA6              	100.00%		H3A4P7              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for H3A4P7 as seed ortholog is 100%.

Group of orthologs #347. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 L.chalumnae:437

Q5KDX5              	100.00%		H3BGZ0              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for H3BGZ0 as seed ortholog is 100%.

Group of orthologs #348. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 L.chalumnae:86

Q5KDK0              	100.00%		H3ARA3              	100.00%
                    	       		H3BAQ6              	36.89%
                    	       		H3A3X6              	6.49%
Bootstrap support for Q5KDK0 as seed ortholog is 100%.
Bootstrap support for H3ARA3 as seed ortholog is 94%.

Group of orthologs #349. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 L.chalumnae:433

Q5K8Y1              	100.00%		H3BAC2              	100.00%
Bootstrap support for Q5K8Y1 as seed ortholog is 100%.
Bootstrap support for H3BAC2 as seed ortholog is 100%.

Group of orthologs #350. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 L.chalumnae:433

Q5KH01              	100.00%		M3XKB5              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for M3XKB5 as seed ortholog is 100%.

Group of orthologs #351. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:432 L.chalumnae:432

Q5KGA8              	100.00%		H3ARW1              	100.00%
                    	       		H3B1S4              	58.15%
Bootstrap support for Q5KGA8 as seed ortholog is 100%.
Bootstrap support for H3ARW1 as seed ortholog is 100%.

Group of orthologs #352. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 L.chalumnae:186

Q5KHB5              	100.00%		H3ASW1              	100.00%
                    	       		H2ZZ89              	39.44%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for H3ASW1 as seed ortholog is 100%.

Group of orthologs #353. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 L.chalumnae:431

Q5KI16              	100.00%		H2ZY34              	100.00%
Bootstrap support for Q5KI16 as seed ortholog is 100%.
Bootstrap support for H2ZY34 as seed ortholog is 100%.

Group of orthologs #354. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 L.chalumnae:241

Q5KDP3              	100.00%		M3XJT3              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for M3XJT3 as seed ortholog is 100%.

Group of orthologs #355. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 L.chalumnae:430

Q5KDR1              	100.00%		H3AQC9              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for H3AQC9 as seed ortholog is 100%.

Group of orthologs #356. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 L.chalumnae:136

Q5KMF5              	100.00%		H3B1E5              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for H3B1E5 as seed ortholog is 99%.

Group of orthologs #357. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 L.chalumnae:428

Q5K9L0              	100.00%		H3A9Y8              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for H3A9Y8 as seed ortholog is 100%.

Group of orthologs #358. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 L.chalumnae:428

Q5KCT5              	100.00%		H3APA8              	100.00%
Bootstrap support for Q5KCT5 as seed ortholog is 100%.
Bootstrap support for H3APA8 as seed ortholog is 100%.

Group of orthologs #359. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 L.chalumnae:428

Q5KDF5              	100.00%		H3BA46              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for H3BA46 as seed ortholog is 100%.

Group of orthologs #360. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 L.chalumnae:428

Q5KLR9              	100.00%		H3BA16              	100.00%
Bootstrap support for Q5KLR9 as seed ortholog is 100%.
Bootstrap support for H3BA16 as seed ortholog is 100%.

Group of orthologs #361. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 L.chalumnae:216

Q5KJH8              	100.00%		H3AAL4              	100.00%
                    	       		H3AF45              	26.13%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for H3AAL4 as seed ortholog is 99%.

Group of orthologs #362. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 L.chalumnae:427

P0CN28              	100.00%		H2ZVC0              	100.00%
Bootstrap support for P0CN28 as seed ortholog is 100%.
Bootstrap support for H2ZVC0 as seed ortholog is 100%.

Group of orthologs #363. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:297 L.chalumnae:263

P0CR10              	100.00%		H3B6Y3              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 100%.
Bootstrap support for H3B6Y3 as seed ortholog is 100%.

Group of orthologs #364. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:23 L.chalumnae:152

Q5KHS2              	100.00%		H3BFY5              	100.00%
Bootstrap support for Q5KHS2 as seed ortholog is 80%.
Bootstrap support for H3BFY5 as seed ortholog is 100%.

Group of orthologs #365. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 L.chalumnae:424

Q5KP39              	100.00%		H3A0R1              	100.00%
                    	       		H2ZS79              	57.49%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for H3A0R1 as seed ortholog is 100%.

Group of orthologs #366. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 L.chalumnae:305

Q5KBU1              	100.00%		H3AIG9              	100.00%
Bootstrap support for Q5KBU1 as seed ortholog is 100%.
Bootstrap support for H3AIG9 as seed ortholog is 100%.

Group of orthologs #367. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 L.chalumnae:424

Q5KIS9              	100.00%		H3AYH7              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for H3AYH7 as seed ortholog is 100%.

Group of orthologs #368. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:318 L.chalumnae:271

Q5KDT4              	100.00%		H2ZXD4              	100.00%
                    	       		H3ATW7              	44.61%
                    	       		H3ARF4              	26.23%
Bootstrap support for Q5KDT4 as seed ortholog is 100%.
Bootstrap support for H2ZXD4 as seed ortholog is 100%.

Group of orthologs #369. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:263 L.chalumnae:288

Q5K8I1              	100.00%		H3AWF8              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for H3AWF8 as seed ortholog is 100%.

Group of orthologs #370. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 L.chalumnae:421

Q5KAH4              	100.00%		H3AG19              	100.00%
                    	       		H3ASG2              	60.36%
                    	       		H3A196              	59.64%
Bootstrap support for Q5KAH4 as seed ortholog is 100%.
Bootstrap support for H3AG19 as seed ortholog is 100%.

Group of orthologs #371. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 L.chalumnae:118

Q5KG30              	100.00%		H3AXH7              	100.00%
                    	       		H3AGW0              	26.45%
                    	       		H3B9K5              	24.45%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for H3AXH7 as seed ortholog is 99%.

Group of orthologs #372. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:360 L.chalumnae:326

P0CQ14              	100.00%		H3AJZ4              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for H3AJZ4 as seed ortholog is 100%.

Group of orthologs #373. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 L.chalumnae:421

Q5KPL5              	100.00%		H3AAU5              	100.00%
Bootstrap support for Q5KPL5 as seed ortholog is 100%.
Bootstrap support for H3AAU5 as seed ortholog is 100%.

Group of orthologs #374. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:323 L.chalumnae:420

Q5KGZ3              	100.00%		H3ABB7              	100.00%
Q5KIR4              	17.81%		
Bootstrap support for Q5KGZ3 as seed ortholog is 100%.
Bootstrap support for H3ABB7 as seed ortholog is 100%.

Group of orthologs #375. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 L.chalumnae:418

P0CN44              	100.00%		H3AQ44              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for H3AQ44 as seed ortholog is 100%.

Group of orthologs #376. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 L.chalumnae:175

Q5KLG5              	100.00%		H3A8U4              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for H3A8U4 as seed ortholog is 99%.

Group of orthologs #377. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 L.chalumnae:418

P0CN42              	100.00%		H3B4Y5              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for H3B4Y5 as seed ortholog is 100%.

Group of orthologs #378. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 L.chalumnae:417

Q5KAF2              	100.00%		H3ABN2              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for H3ABN2 as seed ortholog is 100%.

Group of orthologs #379. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:217 L.chalumnae:226

Q5KP01              	100.00%		H3B895              	100.00%
Bootstrap support for Q5KP01 as seed ortholog is 100%.
Bootstrap support for H3B895 as seed ortholog is 100%.

Group of orthologs #380. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:194 L.chalumnae:100

Q5K7X5              	100.00%		H2ZVH7              	100.00%
Q5K826              	41.14%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for H2ZVH7 as seed ortholog is 99%.

Group of orthologs #381. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:304 L.chalumnae:209

Q5KLS2              	100.00%		H3B343              	100.00%
                    	       		H3BHN0              	44.22%
Bootstrap support for Q5KLS2 as seed ortholog is 100%.
Bootstrap support for H3B343 as seed ortholog is 100%.

Group of orthologs #382. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 L.chalumnae:416

Q5KDT3              	100.00%		H3A050              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for H3A050 as seed ortholog is 100%.

Group of orthologs #383. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 L.chalumnae:415

Q5KJY4              	100.00%		H3AEX7              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for H3AEX7 as seed ortholog is 100%.

Group of orthologs #384. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 L.chalumnae:414

P0CS46              	100.00%		H3BCL3              	100.00%
Bootstrap support for P0CS46 as seed ortholog is 100%.
Bootstrap support for H3BCL3 as seed ortholog is 100%.

Group of orthologs #385. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 L.chalumnae:110

Q5KF44              	100.00%		H3A4B4              	100.00%
                    	       		H3AGU5              	59.55%
                    	       		H3ACW4              	22.34%
Bootstrap support for Q5KF44 as seed ortholog is 100%.
Bootstrap support for H3A4B4 as seed ortholog is 97%.

Group of orthologs #386. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 L.chalumnae:413

P0CN48              	100.00%		H2ZWM9              	100.00%
Bootstrap support for P0CN48 as seed ortholog is 100%.
Bootstrap support for H2ZWM9 as seed ortholog is 100%.

Group of orthologs #387. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 L.chalumnae:295

P0CR06              	100.00%		H3AKH6              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 100%.
Bootstrap support for H3AKH6 as seed ortholog is 100%.

Group of orthologs #388. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:411 L.chalumnae:121

Q5KKU4              	100.00%		H3A0I9              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for H3A0I9 as seed ortholog is 99%.

Group of orthologs #389. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 L.chalumnae:410

Q5KH75              	100.00%		H3BHF1              	100.00%
                    	       		H3BFA5              	22.67%
                    	       		H3AEE9              	18.54%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for H3BHF1 as seed ortholog is 100%.

Group of orthologs #390. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:158 L.chalumnae:21

Q5KKV1              	100.00%		H3BI57              	100.00%
                    	       		H3AGI8              	30.00%
Bootstrap support for Q5KKV1 as seed ortholog is 100%.
Bootstrap support for H3BI57 as seed ortholog is 76%.

Group of orthologs #391. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 L.chalumnae:408

P0CS38              	100.00%		H3B512              	100.00%
Bootstrap support for P0CS38 as seed ortholog is 100%.
Bootstrap support for H3B512 as seed ortholog is 100%.

Group of orthologs #392. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 L.chalumnae:408

Q5KGR5              	100.00%		H3BFU7              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 100%.
Bootstrap support for H3BFU7 as seed ortholog is 100%.

Group of orthologs #393. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 L.chalumnae:295

Q5KL44              	100.00%		H3ASK7              	100.00%
Bootstrap support for Q5KL44 as seed ortholog is 100%.
Bootstrap support for H3ASK7 as seed ortholog is 100%.

Group of orthologs #394. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:406 L.chalumnae:406

P0CR56              	100.00%		H3AZJ0              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for H3AZJ0 as seed ortholog is 100%.

Group of orthologs #395. Best score 405 bits
Score difference with first non-orthologous sequence - C.neoformans:405 L.chalumnae:405

P0CR70              	100.00%		H3AJK3              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for H3AJK3 as seed ortholog is 100%.

Group of orthologs #396. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 L.chalumnae:404

P0CR72              	100.00%		H3A1Q8              	100.00%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for H3A1Q8 as seed ortholog is 100%.

Group of orthologs #397. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:146

Q5K8L9              	100.00%		H3AGZ3              	100.00%
Bootstrap support for Q5K8L9 as seed ortholog is 96%.
Bootstrap support for H3AGZ3 as seed ortholog is 99%.

Group of orthologs #398. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:153

Q5KDX8              	100.00%		H3A5L2              	100.00%
                    	       		H2ZXJ6              	34.44%
Bootstrap support for Q5KDX8 as seed ortholog is 98%.
Bootstrap support for H3A5L2 as seed ortholog is 100%.

Group of orthologs #399. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 L.chalumnae:116

Q5KH88              	100.00%		H3BAW4              	100.00%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for H3BAW4 as seed ortholog is 98%.

Group of orthologs #400. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:212 L.chalumnae:123

Q5KP10              	100.00%		H3A7L7              	100.00%
Bootstrap support for Q5KP10 as seed ortholog is 100%.
Bootstrap support for H3A7L7 as seed ortholog is 99%.

Group of orthologs #401. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 L.chalumnae:402

Q5KM38              	100.00%		H3AV88              	100.00%
Bootstrap support for Q5KM38 as seed ortholog is 100%.
Bootstrap support for H3AV88 as seed ortholog is 100%.

Group of orthologs #402. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 L.chalumnae:402

Q5KKG9              	100.00%		H3BEB0              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for H3BEB0 as seed ortholog is 100%.

Group of orthologs #403. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:353 L.chalumnae:330

Q5KJN4              	100.00%		H2ZTG7              	100.00%
Bootstrap support for Q5KJN4 as seed ortholog is 100%.
Bootstrap support for H2ZTG7 as seed ortholog is 100%.

Group of orthologs #404. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 L.chalumnae:216

Q5K7X0              	100.00%		H3A2P0              	100.00%
                    	       		H3A4W2              	42.78%
                    	       		H3ATB3              	24.04%
Bootstrap support for Q5K7X0 as seed ortholog is 100%.
Bootstrap support for H3A2P0 as seed ortholog is 99%.

Group of orthologs #405. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 L.chalumnae:400

Q5KLS1              	100.00%		H3B4Y2              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for H3B4Y2 as seed ortholog is 100%.

Group of orthologs #406. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 L.chalumnae:399

Q5KAS4              	100.00%		H3AH80              	100.00%
Bootstrap support for Q5KAS4 as seed ortholog is 100%.
Bootstrap support for H3AH80 as seed ortholog is 100%.

Group of orthologs #407. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 L.chalumnae:399

Q5KK64              	100.00%		H3BD51              	100.00%
Bootstrap support for Q5KK64 as seed ortholog is 100%.
Bootstrap support for H3BD51 as seed ortholog is 100%.

Group of orthologs #408. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:238

P0CQ90              	100.00%		H3AB20              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for H3AB20 as seed ortholog is 100%.

Group of orthologs #409. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:319 L.chalumnae:215

Q5KJQ2              	100.00%		H3ANX5              	100.00%
Bootstrap support for Q5KJQ2 as seed ortholog is 100%.
Bootstrap support for H3ANX5 as seed ortholog is 100%.

Group of orthologs #410. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 L.chalumnae:396

P0CP90              	100.00%		H3B3Z3              	100.00%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for H3B3Z3 as seed ortholog is 100%.

Group of orthologs #411. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 L.chalumnae:396

Q5KI73              	100.00%		H3B2B2              	100.00%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for H3B2B2 as seed ortholog is 100%.

Group of orthologs #412. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:148 L.chalumnae:395

Q5KB65              	100.00%		H3BC66              	100.00%
                    	       		H3BHT4              	50.39%
                    	       		H3B1H5              	45.54%
                    	       		H3AT49              	43.51%
Bootstrap support for Q5KB65 as seed ortholog is 99%.
Bootstrap support for H3BC66 as seed ortholog is 100%.

Group of orthologs #413. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:395 L.chalumnae:395

Q5KKX9              	100.00%		H3AZZ8              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 100%.
Bootstrap support for H3AZZ8 as seed ortholog is 100%.

Group of orthologs #414. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:395 L.chalumnae:251

Q5KKS5              	100.00%		H3B1Y6              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for H3B1Y6 as seed ortholog is 100%.

Group of orthologs #415. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:394

Q5KLV5              	100.00%		H2ZRU1              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for H2ZRU1 as seed ortholog is 100%.

Group of orthologs #416. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 L.chalumnae:394

Q5KCC8              	100.00%		H3AW53              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for H3AW53 as seed ortholog is 100%.

Group of orthologs #417. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 L.chalumnae:393

Q5KKQ6              	100.00%		H2ZWM2              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for H2ZWM2 as seed ortholog is 100%.

Group of orthologs #418. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 L.chalumnae:393

Q5KH85              	100.00%		H3AQE4              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for H3AQE4 as seed ortholog is 100%.

Group of orthologs #419. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 L.chalumnae:392

P0CM24              	100.00%		H3AKV5              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for H3AKV5 as seed ortholog is 100%.

Group of orthologs #420. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 L.chalumnae:391

Q5KGK2              	100.00%		H3AT53              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 100%.
Bootstrap support for H3AT53 as seed ortholog is 100%.

Group of orthologs #421. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 L.chalumnae:390

P0CN46              	100.00%		H2ZTY7              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for H2ZTY7 as seed ortholog is 100%.

Group of orthologs #422. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 L.chalumnae:304

Q5KKZ9              	100.00%		H3A1L6              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for H3A1L6 as seed ortholog is 100%.

Group of orthologs #423. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 L.chalumnae:185

Q5KIY3              	100.00%		H3BGP9              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for H3BGP9 as seed ortholog is 99%.

Group of orthologs #424. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 L.chalumnae:389

Q5KJN5              	100.00%		H2ZVE2              	100.00%
                    	       		H3BA52              	33.37%
Bootstrap support for Q5KJN5 as seed ortholog is 100%.
Bootstrap support for H2ZVE2 as seed ortholog is 100%.

Group of orthologs #425. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 L.chalumnae:389

Q5KH27              	100.00%		H3ACG7              	100.00%
                    	       		H3AJT7              	34.12%
Bootstrap support for Q5KH27 as seed ortholog is 100%.
Bootstrap support for H3ACG7 as seed ortholog is 100%.

Group of orthologs #426. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 L.chalumnae:388

Q5KH76              	100.00%		H3B819              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for H3B819 as seed ortholog is 100%.

Group of orthologs #427. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:108

Q5KLZ4              	100.00%		H3BD96              	100.00%
Bootstrap support for Q5KLZ4 as seed ortholog is 100%.
Bootstrap support for H3BD96 as seed ortholog is 99%.

Group of orthologs #428. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 L.chalumnae:387

Q5KIN5              	100.00%		H3AI66              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for H3AI66 as seed ortholog is 100%.

Group of orthologs #429. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 L.chalumnae:258

Q5KQ06              	100.00%		H3BB41              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for H3BB41 as seed ortholog is 100%.

Group of orthologs #430. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 L.chalumnae:386

Q5KLF5              	100.00%		H3A5T5              	100.00%
Bootstrap support for Q5KLF5 as seed ortholog is 100%.
Bootstrap support for H3A5T5 as seed ortholog is 100%.

Group of orthologs #431. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 L.chalumnae:386

P0CP58              	100.00%		H3BC39              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for H3BC39 as seed ortholog is 100%.

Group of orthologs #432. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 L.chalumnae:386

Q5KP99              	100.00%		H3BAS9              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for H3BAS9 as seed ortholog is 100%.

Group of orthologs #433. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 L.chalumnae:302

Q5KB45              	100.00%		H3BDM0              	100.00%
                    	       		H3BAQ7              	44.08%
                    	       		H3AQQ5              	22.50%
                    	       		H3BC70              	11.95%
Bootstrap support for Q5KB45 as seed ortholog is 100%.
Bootstrap support for H3BDM0 as seed ortholog is 100%.

Group of orthologs #434. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:149 L.chalumnae:254

Q5KJI7              	100.00%		H3B9X9              	100.00%
                    	       		H3BAP0              	48.31%
Bootstrap support for Q5KJI7 as seed ortholog is 99%.
Bootstrap support for H3B9X9 as seed ortholog is 99%.

Group of orthologs #435. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 L.chalumnae:102

Q5K8W1              	100.00%		H2ZZ69              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for H2ZZ69 as seed ortholog is 94%.

Group of orthologs #436. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 L.chalumnae:383

Q5KMS5              	100.00%		H3ADV7              	100.00%
Bootstrap support for Q5KMS5 as seed ortholog is 100%.
Bootstrap support for H3ADV7 as seed ortholog is 100%.

Group of orthologs #437. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 L.chalumnae:382

P0CN56              	100.00%		H2ZZ48              	100.00%
Bootstrap support for P0CN56 as seed ortholog is 100%.
Bootstrap support for H2ZZ48 as seed ortholog is 100%.

Group of orthologs #438. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 L.chalumnae:382

P0CO58              	100.00%		H3ABS4              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for H3ABS4 as seed ortholog is 100%.

Group of orthologs #439. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 L.chalumnae:381

Q5KLS5              	100.00%		H3BD47              	100.00%
                    	       		H3AK21              	57.24%
                    	       		H3BI35              	16.01%
                    	       		H3B4L6              	14.82%
                    	       		H3ABL0              	6.90%
Bootstrap support for Q5KLS5 as seed ortholog is 100%.
Bootstrap support for H3BD47 as seed ortholog is 100%.

Group of orthologs #440. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 L.chalumnae:92

Q5KEJ4              	100.00%		H3BD54              	100.00%
                    	       		H3AVH1              	14.12%
Bootstrap support for Q5KEJ4 as seed ortholog is 100%.
Bootstrap support for H3BD54 as seed ortholog is 96%.

Group of orthologs #441. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:121

P0CP68              	100.00%		H2ZWK3              	100.00%
                    	       		H3B7L5              	48.42%
Bootstrap support for P0CP68 as seed ortholog is 98%.
Bootstrap support for H2ZWK3 as seed ortholog is 99%.

Group of orthologs #442. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 L.chalumnae:380

Q5K7Q2              	100.00%		H3A9R2              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for H3A9R2 as seed ortholog is 100%.

Group of orthologs #443. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 L.chalumnae:379

Q5KMH4              	100.00%		H3B8N1              	100.00%
                    	       		H3ATY0              	47.16%
Bootstrap support for Q5KMH4 as seed ortholog is 100%.
Bootstrap support for H3B8N1 as seed ortholog is 100%.

Group of orthologs #444. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 L.chalumnae:379

P0CR86              	100.00%		H3BFU0              	100.00%
Bootstrap support for P0CR86 as seed ortholog is 100%.
Bootstrap support for H3BFU0 as seed ortholog is 100%.

Group of orthologs #445. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:43

Q5KIM3              	100.00%		H3B7A9              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for H3B7A9 as seed ortholog is 81%.

Group of orthologs #446. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 L.chalumnae:377

Q5KFJ6              	100.00%		H3BD09              	100.00%
                    	       		H3B049              	22.66%
Bootstrap support for Q5KFJ6 as seed ortholog is 100%.
Bootstrap support for H3BD09 as seed ortholog is 100%.

Group of orthologs #447. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 L.chalumnae:377

Q5KEY0              	100.00%		H3AN50              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for H3AN50 as seed ortholog is 100%.

Group of orthologs #448. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:260 L.chalumnae:91

Q5K9B8              	100.00%		H3A4R9              	100.00%
                    	       		H3AQ93              	11.34%
                    	       		H3A2R9              	7.48%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for H3A4R9 as seed ortholog is 96%.

Group of orthologs #449. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 L.chalumnae:376

P0CP20              	100.00%		H2ZYS3              	100.00%
                    	       		H3A6P8              	51.83%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for H2ZYS3 as seed ortholog is 100%.

Group of orthologs #450. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:132

Q5KNT3              	100.00%		H3AW75              	100.00%
                    	       		H3B5G8              	54.94%
Bootstrap support for Q5KNT3 as seed ortholog is 100%.
Bootstrap support for H3AW75 as seed ortholog is 99%.

Group of orthologs #451. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 L.chalumnae:376

Q5KFR0              	100.00%		H2ZW28              	100.00%
Bootstrap support for Q5KFR0 as seed ortholog is 100%.
Bootstrap support for H2ZW28 as seed ortholog is 100%.

Group of orthologs #452. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 L.chalumnae:376

Q5KPZ5              	100.00%		H3A2Y2              	100.00%
Bootstrap support for Q5KPZ5 as seed ortholog is 100%.
Bootstrap support for H3A2Y2 as seed ortholog is 100%.

Group of orthologs #453. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:153

Q5KHE5              	100.00%		H3B1U6              	100.00%
P0CP66              	26.61%		H2ZVH9              	57.89%
Bootstrap support for Q5KHE5 as seed ortholog is 93%.
Bootstrap support for H3B1U6 as seed ortholog is 99%.

Group of orthologs #454. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 L.chalumnae:374

Q5KCI3              	100.00%		H3BH88              	100.00%
                    	       		H3BFU4              	5.32%
Bootstrap support for Q5KCI3 as seed ortholog is 100%.
Bootstrap support for H3BH88 as seed ortholog is 100%.

Group of orthologs #455. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 L.chalumnae:374

Q5KAU7              	100.00%		H3A1Z2              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for H3A1Z2 as seed ortholog is 100%.

Group of orthologs #456. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:213

Q5KLR7              	100.00%		H3A9R8              	100.00%
                    	       		H3BBT8              	43.02%
                    	       		H3A525              	30.66%
                    	       		H2ZZ30              	5.49%
Bootstrap support for Q5KLR7 as seed ortholog is 99%.
Bootstrap support for H3A9R8 as seed ortholog is 100%.

Group of orthologs #457. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:202 L.chalumnae:71

Q5KFJ4              	100.00%		H2ZWY2              	100.00%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for H2ZWY2 as seed ortholog is 96%.

Group of orthologs #458. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 L.chalumnae:373

Q5KFV6              	100.00%		H2ZWN8              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for H2ZWN8 as seed ortholog is 100%.

Group of orthologs #459. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 L.chalumnae:373

Q5KE15              	100.00%		H3A2G3              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for H3A2G3 as seed ortholog is 100%.

Group of orthologs #460. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 L.chalumnae:216

Q5KNK2              	100.00%		H3A141              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for H3A141 as seed ortholog is 100%.

Group of orthologs #461. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 L.chalumnae:373

Q5KA97              	100.00%		H3ASP8              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for H3ASP8 as seed ortholog is 100%.

Group of orthologs #462. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 L.chalumnae:373

P0CP50              	100.00%		H3BC88              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for H3BC88 as seed ortholog is 100%.

Group of orthologs #463. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 L.chalumnae:372

Q5KCX4              	100.00%		H3AEA4              	100.00%
                    	       		H3AHC4              	22.03%
Bootstrap support for Q5KCX4 as seed ortholog is 100%.
Bootstrap support for H3AEA4 as seed ortholog is 100%.

Group of orthologs #464. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 L.chalumnae:371

Q5KHU9              	100.00%		H3B8C2              	100.00%
                    	       		H3AYG2              	35.96%
                    	       		H3AXR7              	25.79%
Bootstrap support for Q5KHU9 as seed ortholog is 100%.
Bootstrap support for H3B8C2 as seed ortholog is 100%.

Group of orthologs #465. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 L.chalumnae:371

P0CQ60              	100.00%		H3A547              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for H3A547 as seed ortholog is 100%.

Group of orthologs #466. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 L.chalumnae:282

F5HFW5              	100.00%		H3AAQ7              	100.00%
Bootstrap support for F5HFW5 as seed ortholog is 100%.
Bootstrap support for H3AAQ7 as seed ortholog is 100%.

Group of orthologs #467. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 L.chalumnae:371

Q5KQ95              	100.00%		H3AGE6              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 100%.
Bootstrap support for H3AGE6 as seed ortholog is 100%.

Group of orthologs #468. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 L.chalumnae:369

P0CO78              	100.00%		H3BAP8              	100.00%
                    	       		H2ZV29              	33.89%
Bootstrap support for P0CO78 as seed ortholog is 100%.
Bootstrap support for H3BAP8 as seed ortholog is 100%.

Group of orthologs #469. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 L.chalumnae:170

Q5KDR8              	100.00%		H3ARV6              	100.00%
Bootstrap support for Q5KDR8 as seed ortholog is 100%.
Bootstrap support for H3ARV6 as seed ortholog is 100%.

Group of orthologs #470. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 L.chalumnae:262

Q5KPG7              	100.00%		H3AUY2              	100.00%
Bootstrap support for Q5KPG7 as seed ortholog is 100%.
Bootstrap support for H3AUY2 as seed ortholog is 99%.

Group of orthologs #471. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 L.chalumnae:368

Q5KDV3              	100.00%		H3ADS0              	100.00%
Q5KJX0              	100.00%		
Bootstrap support for Q5KDV3 as seed ortholog is 100%.
Bootstrap support for Q5KJX0 as seed ortholog is 100%.
Bootstrap support for H3ADS0 as seed ortholog is 100%.

Group of orthologs #472. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:21 L.chalumnae:95

Q5KP84              	100.00%		H3ADK9              	100.00%
                    	       		H3AXE1              	100.00%
Bootstrap support for Q5KP84 as seed ortholog is 71%.
Alternative seed ortholog is Q5KBC8 (21 bits away from this cluster)
Bootstrap support for H3ADK9 as seed ortholog is 99%.
Bootstrap support for H3AXE1 as seed ortholog is 99%.

Group of orthologs #473. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 L.chalumnae:256

P0CP88              	100.00%		H3BA83              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for H3BA83 as seed ortholog is 100%.

Group of orthologs #474. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 L.chalumnae:368

Q5KKQ4              	100.00%		H3BDT3              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for H3BDT3 as seed ortholog is 100%.

Group of orthologs #475. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 L.chalumnae:2

Q5KN95              	100.00%		H3AZX5              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for H3AZX5 as seed ortholog is 57%.
Alternative seed ortholog is H3ALN3 (2 bits away from this cluster)

Group of orthologs #476. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:285 L.chalumnae:366

Q5K952              	100.00%		H3BAA1              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for H3BAA1 as seed ortholog is 100%.

Group of orthologs #477. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 L.chalumnae:365

P0CP22              	100.00%		H3A6K0              	100.00%
Bootstrap support for P0CP22 as seed ortholog is 100%.
Bootstrap support for H3A6K0 as seed ortholog is 100%.

Group of orthologs #478. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 L.chalumnae:365

Q5KPN7              	100.00%		H3A516              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for H3A516 as seed ortholog is 100%.

Group of orthologs #479. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 L.chalumnae:365

Q5KPQ4              	100.00%		H3B4G2              	100.00%
Bootstrap support for Q5KPQ4 as seed ortholog is 100%.
Bootstrap support for H3B4G2 as seed ortholog is 100%.

Group of orthologs #480. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:26

Q5KFU8              	100.00%		M3XIJ9              	100.00%
                    	       		H2ZTT8              	29.11%
Bootstrap support for Q5KFU8 as seed ortholog is 99%.
Bootstrap support for M3XIJ9 as seed ortholog is 77%.

Group of orthologs #481. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:364

P0CN08              	100.00%		H3A217              	100.00%
Bootstrap support for P0CN08 as seed ortholog is 99%.
Bootstrap support for H3A217 as seed ortholog is 100%.

Group of orthologs #482. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 L.chalumnae:364

Q5KHI3              	100.00%		H2ZZN1              	100.00%
Bootstrap support for Q5KHI3 as seed ortholog is 100%.
Bootstrap support for H2ZZN1 as seed ortholog is 100%.

Group of orthologs #483. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 L.chalumnae:198

Q5K8Z3              	100.00%		H3ADI2              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for H3ADI2 as seed ortholog is 100%.

Group of orthologs #484. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 L.chalumnae:363

Q5KES4              	100.00%		H3ARG3              	100.00%
Bootstrap support for Q5KES4 as seed ortholog is 100%.
Bootstrap support for H3ARG3 as seed ortholog is 100%.

Group of orthologs #485. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 L.chalumnae:363

Q5KIQ7              	100.00%		H3AVP9              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for H3AVP9 as seed ortholog is 100%.

Group of orthologs #486. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 L.chalumnae:360

Q5KFS1              	100.00%		H3ADY5              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 100%.
Bootstrap support for H3ADY5 as seed ortholog is 100%.

Group of orthologs #487. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 L.chalumnae:360

Q5KK29              	100.00%		H3ASB1              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for H3ASB1 as seed ortholog is 100%.

Group of orthologs #488. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 L.chalumnae:317

Q5KJJ1              	100.00%		H3B2K6              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for H3B2K6 as seed ortholog is 100%.

Group of orthologs #489. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:9 L.chalumnae:359

Q5K758              	100.00%		H3AKW1              	100.00%
                    	       		H3AMT7              	18.16%
Bootstrap support for Q5K758 as seed ortholog is 64%.
Alternative seed ortholog is Q5KEY3 (9 bits away from this cluster)
Bootstrap support for H3AKW1 as seed ortholog is 100%.

Group of orthologs #490. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 L.chalumnae:133

P0CS60              	100.00%		H2ZWI0              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for H2ZWI0 as seed ortholog is 95%.

Group of orthologs #491. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 L.chalumnae:359

Q5KIH5              	100.00%		H2ZVZ4              	100.00%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for H2ZVZ4 as seed ortholog is 100%.

Group of orthologs #492. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 L.chalumnae:358

Q5KCX8              	100.00%		H2ZWA6              	100.00%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for H2ZWA6 as seed ortholog is 100%.

Group of orthologs #493. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 L.chalumnae:356

Q5KPW6              	100.00%		H3B715              	100.00%
Bootstrap support for Q5KPW6 as seed ortholog is 100%.
Bootstrap support for H3B715 as seed ortholog is 100%.

Group of orthologs #494. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 L.chalumnae:258

Q5KJ20              	100.00%		H3AL75              	100.00%
                    	       		H3A7F5              	35.85%
                    	       		H3BFP9              	26.07%
Bootstrap support for Q5KJ20 as seed ortholog is 100%.
Bootstrap support for H3AL75 as seed ortholog is 100%.

Group of orthologs #495. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 L.chalumnae:354

Q5KQ43              	100.00%		H3B4E4              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for H3B4E4 as seed ortholog is 100%.

Group of orthologs #496. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 L.chalumnae:352

Q5K9S7              	100.00%		H3AFE7              	100.00%
                    	       		H3A1E0              	36.84%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for H3AFE7 as seed ortholog is 100%.

Group of orthologs #497. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:352

Q5KJ99              	100.00%		H3ATQ9              	100.00%
Bootstrap support for Q5KJ99 as seed ortholog is 97%.
Bootstrap support for H3ATQ9 as seed ortholog is 100%.

Group of orthologs #498. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 L.chalumnae:351

Q5K972              	100.00%		H3AU89              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for H3AU89 as seed ortholog is 100%.

Group of orthologs #499. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 L.chalumnae:351

Q5K796              	100.00%		H3BBL3              	100.00%
Bootstrap support for Q5K796 as seed ortholog is 100%.
Bootstrap support for H3BBL3 as seed ortholog is 100%.

Group of orthologs #500. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 L.chalumnae:351

Q5KH10              	100.00%		H3BHA1              	100.00%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for H3BHA1 as seed ortholog is 100%.

Group of orthologs #501. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:184 L.chalumnae:29

Q5KAD7              	100.00%		H3AFA1              	100.00%
                    	       		H3AHE6              	24.11%
Bootstrap support for Q5KAD7 as seed ortholog is 100%.
Bootstrap support for H3AFA1 as seed ortholog is 78%.

Group of orthologs #502. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 L.chalumnae:247

Q5KN69              	100.00%		H3A1U1              	100.00%
Bootstrap support for Q5KN69 as seed ortholog is 100%.
Bootstrap support for H3A1U1 as seed ortholog is 100%.

Group of orthologs #503. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 L.chalumnae:349

Q5KJ58              	100.00%		H3AE01              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for H3AE01 as seed ortholog is 100%.

Group of orthologs #504. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 L.chalumnae:349

Q5KEV1              	100.00%		H3AZH8              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for H3AZH8 as seed ortholog is 100%.

Group of orthologs #505. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:42 L.chalumnae:285

Q5KDL9              	100.00%		H3BGU9              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 88%.
Bootstrap support for H3BGU9 as seed ortholog is 100%.

Group of orthologs #506. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:267 L.chalumnae:202

Q5KMP3              	100.00%		H3BI08              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for H3BI08 as seed ortholog is 100%.

Group of orthologs #507. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:12 L.chalumnae:50

Q5KPS8              	100.00%		H3ATU9              	100.00%
                    	       		H3BDZ3              	74.73%
                    	       		H3AFI2              	59.62%
                    	       		H3BDS0              	32.97%
                    	       		H3ARH8              	29.12%
                    	       		H3BED5              	23.63%
                    	       		H3A6E3              	23.63%
                    	       		H3AYB1              	7.42%
Bootstrap support for Q5KPS8 as seed ortholog is 63%.
Alternative seed ortholog is P0CN96 (12 bits away from this cluster)
Bootstrap support for H3ATU9 as seed ortholog is 91%.

Group of orthologs #508. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:188

P0CQ86              	100.00%		H3BH10              	100.00%
                    	       		H3BDW2              	21.78%
Bootstrap support for P0CQ86 as seed ortholog is 100%.
Bootstrap support for H3BH10 as seed ortholog is 100%.

Group of orthologs #509. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 L.chalumnae:347

P0CQ24              	100.00%		H2ZZG1              	100.00%
Bootstrap support for P0CQ24 as seed ortholog is 100%.
Bootstrap support for H2ZZG1 as seed ortholog is 100%.

Group of orthologs #510. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 L.chalumnae:347

Q5KF87              	100.00%		H2ZRP6              	100.00%
Bootstrap support for Q5KF87 as seed ortholog is 100%.
Bootstrap support for H2ZRP6 as seed ortholog is 100%.

Group of orthologs #511. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5KAU3              	100.00%		H3BBC7              	100.00%
Q5KAT1              	65.44%		H3BBR6              	72.37%
                    	       		H2ZVK6              	67.09%
Bootstrap support for Q5KAU3 as seed ortholog is 100%.
Bootstrap support for H3BBC7 as seed ortholog is 100%.

Group of orthologs #512. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5K772              	100.00%		H3APX4              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for H3APX4 as seed ortholog is 100%.

Group of orthologs #513. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5KJG7              	100.00%		H3ACK3              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for H3ACK3 as seed ortholog is 100%.

Group of orthologs #514. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5K9D3              	100.00%		H3AUY3              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 100%.
Bootstrap support for H3AUY3 as seed ortholog is 100%.

Group of orthologs #515. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5KN58              	100.00%		H3AVK8              	100.00%
Bootstrap support for Q5KN58 as seed ortholog is 100%.
Bootstrap support for H3AVK8 as seed ortholog is 100%.

Group of orthologs #516. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:296 L.chalumnae:220

Q5KED7              	100.00%		H3BB10              	100.00%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for H3BB10 as seed ortholog is 100%.

Group of orthologs #517. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5KPH3              	100.00%		H3B421              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for H3B421 as seed ortholog is 100%.

Group of orthologs #518. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 L.chalumnae:346

Q5KEJ6              	100.00%		H3BGD3              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for H3BGD3 as seed ortholog is 100%.

Group of orthologs #519. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 L.chalumnae:219

Q5KHR9              	100.00%		H3B9G3              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 100%.
Bootstrap support for H3B9G3 as seed ortholog is 100%.

Group of orthologs #520. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:85

Q5KNQ9              	100.00%		H2ZZV4              	100.00%
                    	       		H3B4C1              	33.69%
                    	       		H3B1M9              	6.91%
Bootstrap support for Q5KNQ9 as seed ortholog is 100%.
Bootstrap support for H2ZZV4 as seed ortholog is 99%.

Group of orthologs #521. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 L.chalumnae:344

Q5KDU8              	100.00%		H3AB50              	100.00%
                    	       		H3AJQ2              	56.84%
Bootstrap support for Q5KDU8 as seed ortholog is 100%.
Bootstrap support for H3AB50 as seed ortholog is 100%.

Group of orthologs #522. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 L.chalumnae:162

P0CP12              	100.00%		H3AZL8              	100.00%
Bootstrap support for P0CP12 as seed ortholog is 100%.
Bootstrap support for H3AZL8 as seed ortholog is 99%.

Group of orthologs #523. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:11

Q5KID8              	100.00%		H3AD80              	100.00%
                    	       		H3AH42              	31.36%
                    	       		H3BDR9              	6.24%
                    	       		H3AMW3              	6.07%
                    	       		H3ATD9              	6.05%
                    	       		H3BA90              	5.86%
Bootstrap support for Q5KID8 as seed ortholog is 100%.
Bootstrap support for H3AD80 as seed ortholog is 47%.
Alternative seed ortholog is H2ZUH6 (11 bits away from this cluster)

Group of orthologs #524. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:342

Q5KFQ5              	100.00%		H3AVZ1              	100.00%
                    	       		H3AUX6              	46.59%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for H3AVZ1 as seed ortholog is 100%.

Group of orthologs #525. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:141

Q5KJI8              	100.00%		H2ZWW5              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for H2ZWW5 as seed ortholog is 99%.

Group of orthologs #526. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:342

Q5K8P5              	100.00%		H3ABU7              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for H3ABU7 as seed ortholog is 100%.

Group of orthologs #527. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:109

Q5KHT1              	100.00%		H3AFN1              	100.00%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for H3AFN1 as seed ortholog is 99%.

Group of orthologs #528. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:342

Q5KMY7              	100.00%		H3ARI0              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for H3ARI0 as seed ortholog is 100%.

Group of orthologs #529. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 L.chalumnae:342

P0CO32              	100.00%		H3BCK7              	100.00%
Bootstrap support for P0CO32 as seed ortholog is 100%.
Bootstrap support for H3BCK7 as seed ortholog is 100%.

Group of orthologs #530. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 L.chalumnae:341

Q5KPY7              	100.00%		H2ZZA0              	100.00%
Q5KKM8              	7.33%		H3ATR1              	61.05%
                    	       		H3B379              	46.69%
Bootstrap support for Q5KPY7 as seed ortholog is 100%.
Bootstrap support for H2ZZA0 as seed ortholog is 100%.

Group of orthologs #531. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 L.chalumnae:341

Q5KEG3              	100.00%		H3A450              	100.00%
Bootstrap support for Q5KEG3 as seed ortholog is 100%.
Bootstrap support for H3A450 as seed ortholog is 100%.

Group of orthologs #532. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 L.chalumnae:341

Q5KJ42              	100.00%		M3XKJ9              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 100%.
Bootstrap support for M3XKJ9 as seed ortholog is 100%.

Group of orthologs #533. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 L.chalumnae:340

Q5KBN7              	100.00%		H3B2D8              	100.00%
Bootstrap support for Q5KBN7 as seed ortholog is 100%.
Bootstrap support for H3B2D8 as seed ortholog is 100%.

Group of orthologs #534. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 L.chalumnae:339

Q5KDW3              	100.00%		H3AGB5              	100.00%
Bootstrap support for Q5KDW3 as seed ortholog is 100%.
Bootstrap support for H3AGB5 as seed ortholog is 100%.

Group of orthologs #535. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:106

Q5KIW0              	100.00%		H3B4K7              	100.00%
Bootstrap support for Q5KIW0 as seed ortholog is 92%.
Bootstrap support for H3B4K7 as seed ortholog is 98%.

Group of orthologs #536. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 L.chalumnae:231

Q5KEZ5              	100.00%		M3XHM2              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for M3XHM2 as seed ortholog is 100%.

Group of orthologs #537. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:177 L.chalumnae:168

Q5KI66              	100.00%		H2ZV04              	100.00%
                    	       		H3B947              	43.10%
                    	       		H3B4Y9              	41.00%
Bootstrap support for Q5KI66 as seed ortholog is 100%.
Bootstrap support for H2ZV04 as seed ortholog is 100%.

Group of orthologs #538. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:243 L.chalumnae:194

Q5KC09              	100.00%		H3A108              	100.00%
                    	       		H3A4A6              	62.45%
Bootstrap support for Q5KC09 as seed ortholog is 100%.
Bootstrap support for H3A108 as seed ortholog is 99%.

Group of orthologs #539. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:278 L.chalumnae:229

Q5KKN8              	100.00%		H3A2I6              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for H3A2I6 as seed ortholog is 100%.

Group of orthologs #540. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 L.chalumnae:337

Q5K7L9              	100.00%		H3BE94              	100.00%
Bootstrap support for Q5K7L9 as seed ortholog is 100%.
Bootstrap support for H3BE94 as seed ortholog is 100%.

Group of orthologs #541. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:154 L.chalumnae:62

Q5KG79              	100.00%		H3BCL8              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 99%.
Bootstrap support for H3BCL8 as seed ortholog is 91%.

Group of orthologs #542. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:336

Q5K761              	100.00%		H2ZY28              	100.00%
                    	       		H3BB88              	38.81%
Bootstrap support for Q5K761 as seed ortholog is 99%.
Bootstrap support for H2ZY28 as seed ortholog is 100%.

Group of orthologs #543. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 L.chalumnae:335

Q5K7I8              	100.00%		H3AUQ6              	100.00%
Bootstrap support for Q5K7I8 as seed ortholog is 100%.
Bootstrap support for H3AUQ6 as seed ortholog is 100%.

Group of orthologs #544. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 L.chalumnae:274

Q5KM94              	100.00%		H3AP13              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for H3AP13 as seed ortholog is 100%.

Group of orthologs #545. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 L.chalumnae:335

Q5KPE3              	100.00%		H3AQC8              	100.00%
Bootstrap support for Q5KPE3 as seed ortholog is 100%.
Bootstrap support for H3AQC8 as seed ortholog is 100%.

Group of orthologs #546. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 L.chalumnae:334

Q5KGF8              	100.00%		H3ASV2              	100.00%
                    	       		H3B4A5              	36.12%
Bootstrap support for Q5KGF8 as seed ortholog is 100%.
Bootstrap support for H3ASV2 as seed ortholog is 100%.

Group of orthologs #547. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 L.chalumnae:334

Q5K749              	100.00%		H3A560              	100.00%
Bootstrap support for Q5K749 as seed ortholog is 100%.
Bootstrap support for H3A560 as seed ortholog is 100%.

Group of orthologs #548. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 L.chalumnae:169

Q5K721              	100.00%		H3ANL8              	100.00%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for H3ANL8 as seed ortholog is 99%.

Group of orthologs #549. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 L.chalumnae:333

Q5KDL7              	100.00%		H3A9D3              	100.00%
Bootstrap support for Q5KDL7 as seed ortholog is 100%.
Bootstrap support for H3A9D3 as seed ortholog is 100%.

Group of orthologs #550. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 L.chalumnae:332

Q5KK57              	100.00%		H3BDK8              	100.00%
Q5KN19              	6.19%		
Bootstrap support for Q5KK57 as seed ortholog is 100%.
Bootstrap support for H3BDK8 as seed ortholog is 100%.

Group of orthologs #551. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 L.chalumnae:332

Q5KFT4              	100.00%		H3BHY8              	100.00%
Bootstrap support for Q5KFT4 as seed ortholog is 100%.
Bootstrap support for H3BHY8 as seed ortholog is 100%.

Group of orthologs #552. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 L.chalumnae:331

Q5KQ48              	100.00%		H3AP34              	100.00%
                    	       		H3AR60              	50.44%
Bootstrap support for Q5KQ48 as seed ortholog is 100%.
Bootstrap support for H3AP34 as seed ortholog is 100%.

Group of orthologs #553. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 L.chalumnae:331

Q5KCY3              	100.00%		H3B301              	100.00%
                    	       		H3B4W8              	35.38%
Bootstrap support for Q5KCY3 as seed ortholog is 100%.
Bootstrap support for H3B301 as seed ortholog is 100%.

Group of orthologs #554. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 L.chalumnae:190

Q5KD79              	100.00%		H2ZX24              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for H2ZX24 as seed ortholog is 99%.

Group of orthologs #555. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 L.chalumnae:330

P0CQ58              	100.00%		H3AP00              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for H3AP00 as seed ortholog is 100%.

Group of orthologs #556. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 L.chalumnae:329

Q5K7W5              	100.00%		H3AS58              	100.00%
                    	       		H3AF00              	35.85%
Bootstrap support for Q5K7W5 as seed ortholog is 100%.
Bootstrap support for H3AS58 as seed ortholog is 100%.

Group of orthologs #557. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 L.chalumnae:164

Q5K8T6              	100.00%		H3AM73              	100.00%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for H3AM73 as seed ortholog is 100%.

Group of orthologs #558. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:241 L.chalumnae:173

Q5KL60              	100.00%		H3ARP6              	100.00%
                    	       		H3AAB0              	62.29%
                    	       		H3AJJ4              	60.29%
                    	       		H3AXU8              	48.10%
Bootstrap support for Q5KL60 as seed ortholog is 99%.
Bootstrap support for H3ARP6 as seed ortholog is 99%.

Group of orthologs #559. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:35

Q5KCA0              	100.00%		H3BEK0              	100.00%
                    	       		H3A0N3              	44.37%
                    	       		H3B9F8              	31.43%
                    	       		H3A813              	6.40%
Bootstrap support for Q5KCA0 as seed ortholog is 99%.
Bootstrap support for H3BEK0 as seed ortholog is 87%.

Group of orthologs #560. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 L.chalumnae:178

P0CQ18              	100.00%		H3AS92              	100.00%
P0CQ20              	51.24%		
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for H3AS92 as seed ortholog is 99%.

Group of orthologs #561. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 L.chalumnae:328

Q5KBP8              	100.00%		H3AYH0              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for H3AYH0 as seed ortholog is 100%.

Group of orthologs #562. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 L.chalumnae:328

Q5KI89              	100.00%		H3B2C3              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for H3B2C3 as seed ortholog is 100%.

Group of orthologs #563. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:27

P0CM16              	100.00%		H3ANL1              	100.00%
                    	       		H3BIB4              	100.00%
                    	       		H3BES7              	53.66%
Bootstrap support for P0CM16 as seed ortholog is 100%.
Bootstrap support for H3ANL1 as seed ortholog is 92%.
Bootstrap support for H3BIB4 as seed ortholog is 94%.

Group of orthologs #564. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 L.chalumnae:326

Q5KIV1              	100.00%		H3AU52              	100.00%
                    	       		H3A6D9              	5.52%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for H3AU52 as seed ortholog is 100%.

Group of orthologs #565. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:151

Q5KD56              	100.00%		M3XHE1              	100.00%
                    	       		H2ZZY5              	44.34%
Bootstrap support for Q5KD56 as seed ortholog is 81%.
Bootstrap support for M3XHE1 as seed ortholog is 99%.

Group of orthologs #566. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:182 L.chalumnae:212

Q5KDK5              	100.00%		H3AUD3              	100.00%
                    	       		H3AP45              	29.74%
Bootstrap support for Q5KDK5 as seed ortholog is 99%.
Bootstrap support for H3AUD3 as seed ortholog is 99%.

Group of orthologs #567. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 L.chalumnae:322

Q5KA00              	100.00%		H3B3Q4              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for H3B3Q4 as seed ortholog is 100%.

Group of orthologs #568. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 L.chalumnae:321

Q5KHF9              	100.00%		H3BBH0              	100.00%
                    	       		H3ALH7              	8.20%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for H3BBH0 as seed ortholog is 100%.

Group of orthologs #569. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 L.chalumnae:321

P0CN50              	100.00%		H3A4A4              	100.00%
Bootstrap support for P0CN50 as seed ortholog is 100%.
Bootstrap support for H3A4A4 as seed ortholog is 100%.

Group of orthologs #570. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 L.chalumnae:321

Q5KIJ9              	100.00%		H3AES1              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for H3AES1 as seed ortholog is 100%.

Group of orthologs #571. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:59

Q5KHY6              	100.00%		H3ALG6              	100.00%
Bootstrap support for Q5KHY6 as seed ortholog is 98%.
Bootstrap support for H3ALG6 as seed ortholog is 97%.

Group of orthologs #572. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 L.chalumnae:321

Q5KH66              	100.00%		H3ARL2              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for H3ARL2 as seed ortholog is 100%.

Group of orthologs #573. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 L.chalumnae:320

Q5KPS9              	100.00%		H3AQM5              	100.00%
Bootstrap support for Q5KPS9 as seed ortholog is 100%.
Bootstrap support for H3AQM5 as seed ortholog is 100%.

Group of orthologs #574. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 L.chalumnae:267

Q5KQ33              	100.00%		H3AM47              	100.00%
                    	       		M3XKH6              	53.95%
                    	       		H2ZZ06              	29.09%
Bootstrap support for Q5KQ33 as seed ortholog is 100%.
Bootstrap support for H3AM47 as seed ortholog is 100%.

Group of orthologs #575. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 L.chalumnae:319

P0CM38              	100.00%		H3A244              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for H3A244 as seed ortholog is 100%.

Group of orthologs #576. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:235 L.chalumnae:319

Q5KNA1              	100.00%		H3ADX7              	100.00%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for H3ADX7 as seed ortholog is 100%.

Group of orthologs #577. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:121 L.chalumnae:270

Q5KNK5              	100.00%		H3ADZ0              	100.00%
Bootstrap support for Q5KNK5 as seed ortholog is 97%.
Bootstrap support for H3ADZ0 as seed ortholog is 100%.

Group of orthologs #578. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 L.chalumnae:224

Q5KBY0              	100.00%		H3BHL8              	100.00%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for H3BHL8 as seed ortholog is 99%.

Group of orthologs #579. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 L.chalumnae:28

Q5KE74              	100.00%		H2ZXP4              	100.00%
                    	       		H2ZRX1              	6.78%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for H2ZXP4 as seed ortholog is 75%.

Group of orthologs #580. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 L.chalumnae:318

Q5KBY3              	100.00%		H3AR82              	100.00%
Bootstrap support for Q5KBY3 as seed ortholog is 100%.
Bootstrap support for H3AR82 as seed ortholog is 100%.

Group of orthologs #581. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 L.chalumnae:318

Q5KMT6              	100.00%		H3ALU3              	100.00%
Bootstrap support for Q5KMT6 as seed ortholog is 100%.
Bootstrap support for H3ALU3 as seed ortholog is 100%.

Group of orthologs #582. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 L.chalumnae:318

Q5KP54              	100.00%		H3ATB7              	100.00%
Bootstrap support for Q5KP54 as seed ortholog is 100%.
Bootstrap support for H3ATB7 as seed ortholog is 100%.

Group of orthologs #583. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:237 L.chalumnae:118

Q5K9V2              	100.00%		H3B7M8              	100.00%
                    	       		H3AK24              	47.52%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for H3B7M8 as seed ortholog is 100%.

Group of orthologs #584. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:317

Q5KHZ2              	100.00%		H2ZVJ5              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for H2ZVJ5 as seed ortholog is 100%.

Group of orthologs #585. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:317

Q5KPZ1              	100.00%		H3AB87              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for H3AB87 as seed ortholog is 100%.

Group of orthologs #586. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:317

Q5K8A2              	100.00%		H3AY70              	100.00%
Bootstrap support for Q5K8A2 as seed ortholog is 100%.
Bootstrap support for H3AY70 as seed ortholog is 100%.

Group of orthologs #587. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:317

Q5KQ60              	100.00%		H3ARL5              	100.00%
Bootstrap support for Q5KQ60 as seed ortholog is 100%.
Bootstrap support for H3ARL5 as seed ortholog is 100%.

Group of orthologs #588. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 L.chalumnae:272

Q5KJQ1              	100.00%		H3BCT6              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for H3BCT6 as seed ortholog is 100%.

Group of orthologs #589. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:213 L.chalumnae:132

Q5K8I9              	100.00%		H3AXT0              	100.00%
                    	       		H3AYA0              	68.82%
Bootstrap support for Q5K8I9 as seed ortholog is 100%.
Bootstrap support for H3AXT0 as seed ortholog is 100%.

Group of orthologs #590. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:244 L.chalumnae:316

Q5K7N0              	100.00%		H3A2N7              	100.00%
Bootstrap support for Q5K7N0 as seed ortholog is 100%.
Bootstrap support for H3A2N7 as seed ortholog is 100%.

Group of orthologs #591. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 L.chalumnae:316

P0CP92              	100.00%		H3A7C3              	100.00%
Bootstrap support for P0CP92 as seed ortholog is 100%.
Bootstrap support for H3A7C3 as seed ortholog is 100%.

Group of orthologs #592. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 L.chalumnae:316

Q5KHS1              	100.00%		H3A0A5              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for H3A0A5 as seed ortholog is 100%.

Group of orthologs #593. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 L.chalumnae:316

Q5KPC1              	100.00%		H3APE0              	100.00%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for H3APE0 as seed ortholog is 100%.

Group of orthologs #594. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 L.chalumnae:316

Q5KGP1              	100.00%		H3AZH1              	100.00%
Bootstrap support for Q5KGP1 as seed ortholog is 100%.
Bootstrap support for H3AZH1 as seed ortholog is 100%.

Group of orthologs #595. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:268 L.chalumnae:240

Q5KKE2              	100.00%		H3BCW2              	100.00%
Bootstrap support for Q5KKE2 as seed ortholog is 100%.
Bootstrap support for H3BCW2 as seed ortholog is 100%.

Group of orthologs #596. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 L.chalumnae:225

Q5KLM1              	100.00%		M3XKS9              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 100%.
Bootstrap support for M3XKS9 as seed ortholog is 100%.

Group of orthologs #597. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 L.chalumnae:315

Q5KJU2              	100.00%		H3ARJ1              	100.00%
                    	       		H3AA47              	29.72%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for H3ARJ1 as seed ortholog is 100%.

Group of orthologs #598. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 L.chalumnae:315

Q5KAX6              	100.00%		H2ZYS5              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for H2ZYS5 as seed ortholog is 100%.

Group of orthologs #599. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 L.chalumnae:96

Q5KP89              	100.00%		H3AES9              	100.00%
                    	       		H3B7V1              	31.70%
                    	       		H3B7J0              	22.74%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for H3AES9 as seed ortholog is 95%.

Group of orthologs #600. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 L.chalumnae:314

Q5KGN0              	100.00%		H3BI26              	100.00%
                    	       		H3BEK4              	47.67%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for H3BI26 as seed ortholog is 100%.

Group of orthologs #601. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 L.chalumnae:314

Q5KCE8              	100.00%		H3BEI1              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 100%.
Bootstrap support for H3BEI1 as seed ortholog is 100%.

Group of orthologs #602. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 L.chalumnae:313

Q5KNF4              	100.00%		H3AZL7              	100.00%
Bootstrap support for Q5KNF4 as seed ortholog is 100%.
Bootstrap support for H3AZL7 as seed ortholog is 100%.

Group of orthologs #603. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 L.chalumnae:48

Q5KEN3              	100.00%		H3AMB7              	100.00%
                    	       		H2ZVB0              	20.34%
                    	       		H3A5I8              	20.34%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for H3AMB7 as seed ortholog is 87%.

Group of orthologs #604. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 L.chalumnae:312

Q5K9Y2              	100.00%		H2ZXF8              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for H2ZXF8 as seed ortholog is 100%.

Group of orthologs #605. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 L.chalumnae:181

Q5KKX6              	100.00%		M3XGY2              	100.00%
Bootstrap support for Q5KKX6 as seed ortholog is 100%.
Bootstrap support for M3XGY2 as seed ortholog is 99%.

Group of orthologs #606. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:2

Q5KAN2              	100.00%		H2ZVZ1              	100.00%
                    	       		H3A2Y5              	44.44%
                    	       		H3AHX5              	42.00%
                    	       		H2ZUF7              	38.44%
                    	       		M3XIR9              	5.56%
Bootstrap support for Q5KAN2 as seed ortholog is 99%.
Bootstrap support for H2ZVZ1 as seed ortholog is 48%.
Alternative seed ortholog is H3AV14 (2 bits away from this cluster)

Group of orthologs #607. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:240

Q5KB78              	100.00%		H3AMB4              	100.00%
                    	       		H3ALI2              	52.49%
Bootstrap support for Q5KB78 as seed ortholog is 100%.
Bootstrap support for H3AMB4 as seed ortholog is 100%.

Group of orthologs #608. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 L.chalumnae:202

Q5KDP4              	100.00%		H3A6A2              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for H3A6A2 as seed ortholog is 100%.

Group of orthologs #609. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:154

P0CR08              	100.00%		H3BBW4              	100.00%
Bootstrap support for P0CR08 as seed ortholog is 94%.
Bootstrap support for H3BBW4 as seed ortholog is 99%.

Group of orthologs #610. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:243 L.chalumnae:311

Q5KN85              	100.00%		H3BG04              	100.00%
Bootstrap support for Q5KN85 as seed ortholog is 100%.
Bootstrap support for H3BG04 as seed ortholog is 100%.

Group of orthologs #611. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 L.chalumnae:310

P0CM62              	100.00%		H2ZS88              	100.00%
Bootstrap support for P0CM62 as seed ortholog is 100%.
Bootstrap support for H2ZS88 as seed ortholog is 100%.

Group of orthologs #612. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 L.chalumnae:309

Q5KE08              	100.00%		H3A5V5              	100.00%
                    	       		H3AF20              	30.23%
Bootstrap support for Q5KE08 as seed ortholog is 100%.
Bootstrap support for H3A5V5 as seed ortholog is 100%.

Group of orthologs #613. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:225 L.chalumnae:167

P0CS50              	100.00%		H3B1M2              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 100%.
Bootstrap support for H3B1M2 as seed ortholog is 99%.

Group of orthologs #614. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 L.chalumnae:201

Q5KG46              	100.00%		H3AT78              	100.00%
Bootstrap support for Q5KG46 as seed ortholog is 100%.
Bootstrap support for H3AT78 as seed ortholog is 99%.

Group of orthologs #615. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 L.chalumnae:309

P0CS12              	100.00%		H3B9E7              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for H3B9E7 as seed ortholog is 100%.

Group of orthologs #616. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 L.chalumnae:309

Q5KK40              	100.00%		H3B6A3              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for H3B6A3 as seed ortholog is 100%.

Group of orthologs #617. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 L.chalumnae:309

Q5K950              	100.00%		M3XIW3              	100.00%
Bootstrap support for Q5K950 as seed ortholog is 100%.
Bootstrap support for M3XIW3 as seed ortholog is 100%.

Group of orthologs #618. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 L.chalumnae:308

P0CP02              	100.00%		H3APV3              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for H3APV3 as seed ortholog is 100%.

Group of orthologs #619. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 L.chalumnae:143

Q5K8Z6              	100.00%		H3A961              	100.00%
                    	       		H3BD34              	67.21%
                    	       		H3ACE2              	32.24%
                    	       		H2ZVW0              	11.48%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for H3A961 as seed ortholog is 100%.

Group of orthologs #620. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:50

Q5KNV3              	100.00%		M3XIE6              	100.00%
                    	       		H3A012              	54.24%
                    	       		H3AV22              	9.40%
Bootstrap support for Q5KNV3 as seed ortholog is 97%.
Bootstrap support for M3XIE6 as seed ortholog is 82%.

Group of orthologs #621. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 L.chalumnae:307

Q5K9R5              	100.00%		H2ZUH4              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for H2ZUH4 as seed ortholog is 100%.

Group of orthologs #622. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 L.chalumnae:307

Q5KAW7              	100.00%		H3AGH6              	100.00%
Bootstrap support for Q5KAW7 as seed ortholog is 100%.
Bootstrap support for H3AGH6 as seed ortholog is 100%.

Group of orthologs #623. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 L.chalumnae:306

Q5KGD3              	100.00%		H3ADT7              	100.00%
                    	       		H3BDX4              	43.54%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for H3ADT7 as seed ortholog is 100%.

Group of orthologs #624. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 L.chalumnae:306

Q5KQ94              	100.00%		H3AV80              	100.00%
                    	       		H2ZSN5              	56.06%
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for H3AV80 as seed ortholog is 100%.

Group of orthologs #625. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 L.chalumnae:306

Q5KC90              	100.00%		H3AEM3              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for H3AEM3 as seed ortholog is 100%.

Group of orthologs #626. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 L.chalumnae:305

Q5KAT4              	100.00%		H3A6J3              	100.00%
Q5KAV3              	59.15%		H3A2M7              	58.66%
Bootstrap support for Q5KAT4 as seed ortholog is 100%.
Bootstrap support for H3A6J3 as seed ortholog is 100%.

Group of orthologs #627. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:215 L.chalumnae:89

Q5KKP1              	100.00%		H3ACB8              	100.00%
                    	       		H3AN70              	39.39%
Bootstrap support for Q5KKP1 as seed ortholog is 100%.
Bootstrap support for H3ACB8 as seed ortholog is 98%.

Group of orthologs #628. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 L.chalumnae:305

Q5KNE6              	100.00%		H3AUG7              	100.00%
Q5K809              	46.34%		
Bootstrap support for Q5KNE6 as seed ortholog is 100%.
Bootstrap support for H3AUG7 as seed ortholog is 100%.

Group of orthologs #629. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 L.chalumnae:305

Q5KL14              	100.00%		H3B0A8              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for H3B0A8 as seed ortholog is 100%.

Group of orthologs #630. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 L.chalumnae:47

Q5KBD9              	100.00%		H3BB08              	100.00%
                    	       		H3A5E0              	37.85%
Bootstrap support for Q5KBD9 as seed ortholog is 100%.
Bootstrap support for H3BB08 as seed ortholog is 95%.

Group of orthologs #631. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 L.chalumnae:304

Q5KNU1              	100.00%		H3BFG9              	100.00%
                    	       		H3AMH0              	35.36%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for H3BFG9 as seed ortholog is 100%.

Group of orthologs #632. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:187 L.chalumnae:216

Q5K8T0              	100.00%		H3A5R8              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for H3A5R8 as seed ortholog is 100%.

Group of orthologs #633. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 L.chalumnae:223

P0CS32              	100.00%		H3AWG7              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for H3AWG7 as seed ortholog is 100%.

Group of orthologs #634. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 L.chalumnae:304

Q5KKU8              	100.00%		H3AS40              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for H3AS40 as seed ortholog is 100%.

Group of orthologs #635. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:5 L.chalumnae:46

Q5K854              	100.00%		H3AZG1              	100.00%
                    	       		H3A9B4              	36.56%
Bootstrap support for Q5K854 as seed ortholog is 60%.
Alternative seed ortholog is Q5KJY2 (5 bits away from this cluster)
Bootstrap support for H3AZG1 as seed ortholog is 97%.

Group of orthologs #636. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 L.chalumnae:303

Q5K737              	100.00%		H3AZF3              	100.00%
Bootstrap support for Q5K737 as seed ortholog is 100%.
Bootstrap support for H3AZF3 as seed ortholog is 100%.

Group of orthologs #637. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 L.chalumnae:303

Q5KLE9              	100.00%		H3AM61              	100.00%
Bootstrap support for Q5KLE9 as seed ortholog is 100%.
Bootstrap support for H3AM61 as seed ortholog is 100%.

Group of orthologs #638. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:9

Q5KGG9              	100.00%		H2ZUK3              	100.00%
                    	       		H3AUZ2              	39.79%
Bootstrap support for Q5KGG9 as seed ortholog is 100%.
Bootstrap support for H2ZUK3 as seed ortholog is 54%.
Alternative seed ortholog is H3B2Q0 (9 bits away from this cluster)

Group of orthologs #639. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:302

Q5KF16              	100.00%		H3AM32              	100.00%
                    	       		H2ZS30              	14.91%
Bootstrap support for Q5KF16 as seed ortholog is 100%.
Bootstrap support for H3AM32 as seed ortholog is 100%.

Group of orthologs #640. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:302

Q5KFZ3              	100.00%		H2ZX45              	100.00%
Bootstrap support for Q5KFZ3 as seed ortholog is 100%.
Bootstrap support for H2ZX45 as seed ortholog is 100%.

Group of orthologs #641. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:302

Q5KC51              	100.00%		H3ALE4              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for H3ALE4 as seed ortholog is 100%.

Group of orthologs #642. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:247

Q5KCK7              	100.00%		H3B881              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for H3B881 as seed ortholog is 100%.

Group of orthologs #643. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:302

Q5KDM0              	100.00%		H3B8R6              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for H3B8R6 as seed ortholog is 100%.

Group of orthologs #644. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:302

Q5KLS0              	100.00%		H3B063              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for H3B063 as seed ortholog is 100%.

Group of orthologs #645. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 L.chalumnae:302

Q5KI12              	100.00%		H3BC16              	100.00%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for H3BC16 as seed ortholog is 100%.

Group of orthologs #646. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 L.chalumnae:301

Q5K955              	100.00%		H2ZVQ2              	100.00%
Bootstrap support for Q5K955 as seed ortholog is 100%.
Bootstrap support for H2ZVQ2 as seed ortholog is 100%.

Group of orthologs #647. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:257 L.chalumnae:301

Q5KCG6              	100.00%		H3A030              	100.00%
Bootstrap support for Q5KCG6 as seed ortholog is 100%.
Bootstrap support for H3A030 as seed ortholog is 100%.

Group of orthologs #648. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 L.chalumnae:301

Q5KK78              	100.00%		H2ZYP3              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for H2ZYP3 as seed ortholog is 100%.

Group of orthologs #649. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:45

Q5KP65              	100.00%		H3B420              	100.00%
Bootstrap support for Q5KP65 as seed ortholog is 99%.
Bootstrap support for H3B420 as seed ortholog is 90%.

Group of orthologs #650. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:83 L.chalumnae:84

Q5KQ09              	100.00%		M3XKG4              	100.00%
Q5KA14              	12.70%		
Q5KCH2              	12.21%		
Q5KJA6              	11.96%		
Q5KJA2              	11.59%		
Q5KCB5              	11.22%		
Q5KD25              	10.60%		
Q5KDS2              	9.25%		
Bootstrap support for Q5KQ09 as seed ortholog is 98%.
Bootstrap support for M3XKG4 as seed ortholog is 97%.

Group of orthologs #651. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:3

Q5KH19              	100.00%		H3BAF3              	100.00%
                    	       		H3B6J5              	24.16%
Bootstrap support for Q5KH19 as seed ortholog is 99%.
Bootstrap support for H3BAF3 as seed ortholog is 46%.
Alternative seed ortholog is H3AEP4 (3 bits away from this cluster)

Group of orthologs #652. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:300

Q5KJQ8              	100.00%		H3A5P1              	100.00%
Bootstrap support for Q5KJQ8 as seed ortholog is 99%.
Bootstrap support for H3A5P1 as seed ortholog is 100%.

Group of orthologs #653. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 L.chalumnae:300

Q5KQ18              	100.00%		H3AB41              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for H3AB41 as seed ortholog is 100%.

Group of orthologs #654. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 L.chalumnae:300

Q5K9Y4              	100.00%		H3BEZ8              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for H3BEZ8 as seed ortholog is 100%.

Group of orthologs #655. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 L.chalumnae:33

Q5KGZ9              	100.00%		H3BFJ3              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for H3BFJ3 as seed ortholog is 71%.
Alternative seed ortholog is H3B9C9 (33 bits away from this cluster)

Group of orthologs #656. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 L.chalumnae:12

Q5KB90              	100.00%		H3AJD9              	100.00%
                    	       		H3B4P4              	39.21%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for H3AJD9 as seed ortholog is 57%.
Alternative seed ortholog is H3B5J9 (12 bits away from this cluster)

Group of orthologs #657. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:299

Q5KEF4              	100.00%		H3BC27              	100.00%
Bootstrap support for Q5KEF4 as seed ortholog is 99%.
Bootstrap support for H3BC27 as seed ortholog is 100%.

Group of orthologs #658. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 L.chalumnae:298

Q5KCS1              	100.00%		H3BFS3              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for H3BFS3 as seed ortholog is 100%.

Group of orthologs #659. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 L.chalumnae:297

Q5KHK9              	100.00%		H2ZVQ5              	100.00%
                    	       		H3ATG8              	24.83%
                    	       		H3AW08              	24.41%
                    	       		H3AZR5              	12.27%
                    	       		H3AYP0              	11.99%
Bootstrap support for Q5KHK9 as seed ortholog is 100%.
Bootstrap support for H2ZVQ5 as seed ortholog is 100%.

Group of orthologs #660. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:215 L.chalumnae:216

Q5K7W2              	100.00%		H3BB87              	100.00%
Q5K7W1              	77.91%		H3ADX1              	44.80%
                    	       		H3AL16              	42.49%
                    	       		H3AR27              	42.20%
Bootstrap support for Q5K7W2 as seed ortholog is 100%.
Bootstrap support for H3BB87 as seed ortholog is 100%.

Group of orthologs #661. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:55

Q5K880              	100.00%		H3A6J2              	100.00%
                    	       		H3BH91              	82.81%
Bootstrap support for Q5K880 as seed ortholog is 100%.
Bootstrap support for H3A6J2 as seed ortholog is 99%.

Group of orthologs #662. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 L.chalumnae:297

Q5KCI0              	100.00%		H3A7Z4              	100.00%
                    	       		H3BIE1              	32.20%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for H3A7Z4 as seed ortholog is 100%.

Group of orthologs #663. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 L.chalumnae:297

Q5KJ16              	100.00%		H3A7A8              	100.00%
                    	       		H3AIQ7              	64.48%
Bootstrap support for Q5KJ16 as seed ortholog is 100%.
Bootstrap support for H3A7A8 as seed ortholog is 100%.

Group of orthologs #664. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:127 L.chalumnae:84

Q5KPZ0              	100.00%		H3AXM8              	100.00%
                    	       		H3AEQ2              	7.22%
Bootstrap support for Q5KPZ0 as seed ortholog is 99%.
Bootstrap support for H3AXM8 as seed ortholog is 95%.

Group of orthologs #665. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 L.chalumnae:297

Q5KAQ7              	100.00%		H3BFY7              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for H3BFY7 as seed ortholog is 100%.

Group of orthologs #666. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 L.chalumnae:297

Q5KJY8              	100.00%		H3B6P9              	100.00%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for H3B6P9 as seed ortholog is 100%.

Group of orthologs #667. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 L.chalumnae:296

Q5K9U9              	100.00%		H2ZSE7              	100.00%
Bootstrap support for Q5K9U9 as seed ortholog is 100%.
Bootstrap support for H2ZSE7 as seed ortholog is 100%.

Group of orthologs #668. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 L.chalumnae:296

Q5K6V3              	100.00%		H3AT34              	100.00%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for H3AT34 as seed ortholog is 100%.

Group of orthologs #669. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 L.chalumnae:67

Q5KFD9              	100.00%		H3B5T0              	100.00%
                    	       		H3A4V8              	69.83%
                    	       		H3B232              	12.93%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for H3B5T0 as seed ortholog is 99%.

Group of orthologs #670. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 L.chalumnae:294

Q5KJD4              	100.00%		H2ZXM1              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for H2ZXM1 as seed ortholog is 100%.

Group of orthologs #671. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:293

Q9HFU4              	100.00%		H2ZXW5              	100.00%
Bootstrap support for Q9HFU4 as seed ortholog is 99%.
Bootstrap support for H2ZXW5 as seed ortholog is 100%.

Group of orthologs #672. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 L.chalumnae:293

Q5KFC5              	100.00%		H3BHH6              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for H3BHH6 as seed ortholog is 100%.

Group of orthologs #673. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 L.chalumnae:242

Q5KD50              	100.00%		H3A689              	100.00%
                    	       		H3A705              	54.20%
                    	       		H3B791              	40.00%
                    	       		H3AGI6              	24.78%
                    	       		H3B3J1              	16.23%
                    	       		H3AJG8              	15.94%
Bootstrap support for Q5KD50 as seed ortholog is 100%.
Bootstrap support for H3A689 as seed ortholog is 100%.

Group of orthologs #674. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 L.chalumnae:292

Q5KJM5              	100.00%		H3BH26              	100.00%
                    	       		M3XH91              	72.04%
                    	       		H3BAS1              	62.45%
                    	       		H3BE04              	60.79%
Bootstrap support for Q5KJM5 as seed ortholog is 100%.
Bootstrap support for H3BH26 as seed ortholog is 100%.

Group of orthologs #675. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 L.chalumnae:84

Q5KFU4              	100.00%		H2ZXY3              	100.00%
                    	       		H3AL65              	20.86%
                    	       		H3AK84              	10.96%
Bootstrap support for Q5KFU4 as seed ortholog is 100%.
Bootstrap support for H2ZXY3 as seed ortholog is 99%.

Group of orthologs #676. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 L.chalumnae:292

Q5K8X8              	100.00%		H3B558              	100.00%
                    	       		H3AI51              	26.76%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for H3B558 as seed ortholog is 100%.

Group of orthologs #677. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 L.chalumnae:199

Q5K8U2              	100.00%		H3A7E0              	100.00%
Bootstrap support for Q5K8U2 as seed ortholog is 100%.
Bootstrap support for H3A7E0 as seed ortholog is 99%.

Group of orthologs #678. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 L.chalumnae:292

Q5K8K0              	100.00%		H3B495              	100.00%
Bootstrap support for Q5K8K0 as seed ortholog is 100%.
Bootstrap support for H3B495 as seed ortholog is 100%.

Group of orthologs #679. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 L.chalumnae:291

Q5KD10              	100.00%		H3B0Y8              	100.00%
Bootstrap support for Q5KD10 as seed ortholog is 100%.
Bootstrap support for H3B0Y8 as seed ortholog is 100%.

Group of orthologs #680. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 L.chalumnae:291

P0CO12              	100.00%		H3BCQ0              	100.00%
Bootstrap support for P0CO12 as seed ortholog is 100%.
Bootstrap support for H3BCQ0 as seed ortholog is 100%.

Group of orthologs #681. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 L.chalumnae:289

Q5KJZ3              	100.00%		H3BC11              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 100%.
Bootstrap support for H3BC11 as seed ortholog is 100%.

Group of orthologs #682. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 L.chalumnae:288

Q5KEB2              	100.00%		H3A6P7              	100.00%
                    	       		H3A3S6              	65.16%
                    	       		H3AUM1              	24.66%
Bootstrap support for Q5KEB2 as seed ortholog is 100%.
Bootstrap support for H3A6P7 as seed ortholog is 100%.

Group of orthologs #683. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 L.chalumnae:210

Q5KKC2              	100.00%		H3BHG4              	100.00%
                    	       		H3B1F4              	34.36%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for H3BHG4 as seed ortholog is 100%.

Group of orthologs #684. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 L.chalumnae:288

Q5KEA3              	100.00%		H3AFQ6              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for H3AFQ6 as seed ortholog is 100%.

Group of orthologs #685. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 L.chalumnae:288

Q5KC64              	100.00%		H3AWR4              	100.00%
Bootstrap support for Q5KC64 as seed ortholog is 100%.
Bootstrap support for H3AWR4 as seed ortholog is 100%.

Group of orthologs #686. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 L.chalumnae:288

Q5KB98              	100.00%		H3BFN8              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for H3BFN8 as seed ortholog is 100%.

Group of orthologs #687. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 L.chalumnae:287

Q5K8J5              	100.00%		H3ASB6              	100.00%
                    	       		H3ARM7              	45.74%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for H3ASB6 as seed ortholog is 100%.

Group of orthologs #688. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 L.chalumnae:287

Q5K6Y9              	100.00%		H2ZZ12              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for H2ZZ12 as seed ortholog is 100%.

Group of orthologs #689. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 L.chalumnae:287

P0CQ56              	100.00%		H3A155              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for H3A155 as seed ortholog is 100%.

Group of orthologs #690. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:27 L.chalumnae:286

Q5KD15              	100.00%		H2ZYY0              	100.00%
Q5KEL5              	91.36%		
Q5K981              	53.93%		
Bootstrap support for Q5KD15 as seed ortholog is 78%.
Bootstrap support for H2ZYY0 as seed ortholog is 100%.

Group of orthologs #691. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 L.chalumnae:205

Q5KNJ6              	100.00%		M3XL68              	100.00%
                    	       		H3BHK9              	34.18%
Bootstrap support for Q5KNJ6 as seed ortholog is 100%.
Bootstrap support for M3XL68 as seed ortholog is 100%.

Group of orthologs #692. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 L.chalumnae:286

Q5KKT0              	100.00%		H2ZSD4              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for H2ZSD4 as seed ortholog is 100%.

Group of orthologs #693. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 L.chalumnae:286

Q5KCP8              	100.00%		H3ABZ1              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for H3ABZ1 as seed ortholog is 100%.

Group of orthologs #694. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 L.chalumnae:242

Q5K8C0              	100.00%		H3ASL2              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for H3ASL2 as seed ortholog is 100%.

Group of orthologs #695. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 L.chalumnae:209

Q5KMX1              	100.00%		H3AI52              	100.00%
Bootstrap support for Q5KMX1 as seed ortholog is 100%.
Bootstrap support for H3AI52 as seed ortholog is 100%.

Group of orthologs #696. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 L.chalumnae:285

Q5K8A1              	100.00%		H2ZVN7              	100.00%
                    	       		H3AQU4              	57.64%
                    	       		H3B2N2              	34.89%
Bootstrap support for Q5K8A1 as seed ortholog is 100%.
Bootstrap support for H2ZVN7 as seed ortholog is 100%.

Group of orthologs #697. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 L.chalumnae:285

P0CM80              	100.00%		H2ZTG4              	100.00%
Bootstrap support for P0CM80 as seed ortholog is 100%.
Bootstrap support for H2ZTG4 as seed ortholog is 100%.

Group of orthologs #698. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:115

P0CR04              	100.00%		H3AX40              	100.00%
Bootstrap support for P0CR04 as seed ortholog is 99%.
Bootstrap support for H3AX40 as seed ortholog is 99%.

Group of orthologs #699. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 L.chalumnae:90

Q5KCX9              	100.00%		H3AQB8              	100.00%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for H3AQB8 as seed ortholog is 60%.
Alternative seed ortholog is H3AHD0 (90 bits away from this cluster)

Group of orthologs #700. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:237 L.chalumnae:195

Q5KDC2              	100.00%		H3B444              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 100%.
Bootstrap support for H3B444 as seed ortholog is 100%.

Group of orthologs #701. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:165 L.chalumnae:140

Q5K810              	100.00%		H3B1V4              	100.00%
                    	       		H3A850              	45.93%
                    	       		H3AFA5              	37.04%
Bootstrap support for Q5K810 as seed ortholog is 100%.
Bootstrap support for H3B1V4 as seed ortholog is 100%.

Group of orthologs #702. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:79

Q5KM47              	100.00%		H3AAH3              	100.00%
                    	       		H3AMZ1              	42.82%
Bootstrap support for Q5KM47 as seed ortholog is 99%.
Bootstrap support for H3AAH3 as seed ortholog is 98%.

Group of orthologs #703. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:178 L.chalumnae:175

Q5KD75              	100.00%		H2ZZT1              	100.00%
Bootstrap support for Q5KD75 as seed ortholog is 99%.
Bootstrap support for H2ZZT1 as seed ortholog is 100%.

Group of orthologs #704. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 L.chalumnae:284

Q5KCA4              	100.00%		H3AL64              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for H3AL64 as seed ortholog is 100%.

Group of orthologs #705. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 L.chalumnae:284

Q5KLQ5              	100.00%		H3ANN4              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for H3ANN4 as seed ortholog is 100%.

Group of orthologs #706. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 L.chalumnae:284

Q5KBP2              	100.00%		H3BGJ4              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for H3BGJ4 as seed ortholog is 100%.

Group of orthologs #707. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 L.chalumnae:283

Q5KJR0              	100.00%		H3AG59              	100.00%
Bootstrap support for Q5KJR0 as seed ortholog is 100%.
Bootstrap support for H3AG59 as seed ortholog is 100%.

Group of orthologs #708. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 L.chalumnae:282

Q5KC89              	100.00%		H3A6D1              	100.00%
                    	       		H3ASN3              	29.02%
Bootstrap support for Q5KC89 as seed ortholog is 100%.
Bootstrap support for H3A6D1 as seed ortholog is 100%.

Group of orthologs #709. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 L.chalumnae:282

Q5K8Z2              	100.00%		H3AUQ3              	100.00%
                    	       		H3BI78              	68.27%
Bootstrap support for Q5K8Z2 as seed ortholog is 100%.
Bootstrap support for H3AUQ3 as seed ortholog is 100%.

Group of orthologs #710. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 L.chalumnae:282

Q5K947              	100.00%		H3ANS2              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for H3ANS2 as seed ortholog is 100%.

Group of orthologs #711. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 L.chalumnae:147

P0CM04              	100.00%		H3AU30              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 100%.
Bootstrap support for H3AU30 as seed ortholog is 99%.

Group of orthologs #712. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:236 L.chalumnae:208

Q5KN41              	100.00%		H3B8L9              	100.00%
Bootstrap support for Q5KN41 as seed ortholog is 100%.
Bootstrap support for H3B8L9 as seed ortholog is 100%.

Group of orthologs #713. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 L.chalumnae:240

Q5KPK4              	100.00%		H3BGW8              	100.00%
Bootstrap support for Q5KPK4 as seed ortholog is 100%.
Bootstrap support for H3BGW8 as seed ortholog is 100%.

Group of orthologs #714. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 L.chalumnae:281

Q5KKK5              	100.00%		H3AH88              	100.00%
                    	       		H3AYR4              	6.56%
Bootstrap support for Q5KKK5 as seed ortholog is 100%.
Bootstrap support for H3AH88 as seed ortholog is 100%.

Group of orthologs #715. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 L.chalumnae:185

Q5KQ65              	100.00%		H3A3U5              	100.00%
Bootstrap support for Q5KQ65 as seed ortholog is 100%.
Bootstrap support for H3A3U5 as seed ortholog is 100%.

Group of orthologs #716. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 L.chalumnae:281

Q5KIJ1              	100.00%		H3AQC5              	100.00%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for H3AQC5 as seed ortholog is 100%.

Group of orthologs #717. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:101

Q5KG52              	100.00%		H3A6M6              	100.00%
                    	       		M3XI07              	21.43%
                    	       		M3XHF0              	19.37%
Bootstrap support for Q5KG52 as seed ortholog is 98%.
Bootstrap support for H3A6M6 as seed ortholog is 96%.

Group of orthologs #718. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:28 L.chalumnae:280

Q5KIR0              	100.00%		H3A7G4              	100.00%
                    	       		H3AN53              	24.13%
Bootstrap support for Q5KIR0 as seed ortholog is 78%.
Bootstrap support for H3A7G4 as seed ortholog is 100%.

Group of orthologs #719. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 L.chalumnae:280

Q5KHY1              	100.00%		H3ACS3              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for H3ACS3 as seed ortholog is 100%.

Group of orthologs #720. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 L.chalumnae:279

Q5KNX1              	100.00%		H3ANJ8              	100.00%
Bootstrap support for Q5KNX1 as seed ortholog is 100%.
Bootstrap support for H3ANJ8 as seed ortholog is 100%.

Group of orthologs #721. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 L.chalumnae:279

Q5KGE9              	100.00%		H3B2A0              	100.00%
Bootstrap support for Q5KGE9 as seed ortholog is 100%.
Bootstrap support for H3B2A0 as seed ortholog is 100%.

Group of orthologs #722. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 L.chalumnae:279

Q5KK45              	100.00%		H3B664              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for H3B664 as seed ortholog is 100%.

Group of orthologs #723. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:36

Q5KGZ4              	100.00%		H3BB91              	100.00%
                    	       		H3AW20              	38.60%
                    	       		H3BBM7              	16.96%
                    	       		H3ATF1              	16.96%
Bootstrap support for Q5KGZ4 as seed ortholog is 100%.
Bootstrap support for H3BB91 as seed ortholog is 93%.

Group of orthologs #724. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 L.chalumnae:278

Q5K7J7              	100.00%		H3AMY6              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 100%.
Bootstrap support for H3AMY6 as seed ortholog is 100%.

Group of orthologs #725. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 L.chalumnae:278

Q5KIT6              	100.00%		H3AFC9              	100.00%
Bootstrap support for Q5KIT6 as seed ortholog is 100%.
Bootstrap support for H3AFC9 as seed ortholog is 100%.

Group of orthologs #726. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 L.chalumnae:278

Q5K9W9              	100.00%		H3B0S0              	100.00%
Bootstrap support for Q5K9W9 as seed ortholog is 100%.
Bootstrap support for H3B0S0 as seed ortholog is 100%.

Group of orthologs #727. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 L.chalumnae:278

P0CN94              	100.00%		H3B832              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for H3B832 as seed ortholog is 100%.

Group of orthologs #728. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 L.chalumnae:277

Q5K8K4              	100.00%		H3AYD4              	100.00%
Bootstrap support for Q5K8K4 as seed ortholog is 100%.
Bootstrap support for H3AYD4 as seed ortholog is 100%.

Group of orthologs #729. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 L.chalumnae:277

Q5KBD0              	100.00%		H3BBF7              	100.00%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for H3BBF7 as seed ortholog is 100%.

Group of orthologs #730. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 L.chalumnae:222

Q5KJS0              	100.00%		H3BCM6              	100.00%
Bootstrap support for Q5KJS0 as seed ortholog is 100%.
Bootstrap support for H3BCM6 as seed ortholog is 99%.

Group of orthologs #731. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 L.chalumnae:276

Q5K8G1              	100.00%		H3ASY8              	100.00%
Bootstrap support for Q5K8G1 as seed ortholog is 100%.
Bootstrap support for H3ASY8 as seed ortholog is 100%.

Group of orthologs #732. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 L.chalumnae:276

Q5KJU1              	100.00%		H3AV84              	100.00%
Bootstrap support for Q5KJU1 as seed ortholog is 100%.
Bootstrap support for H3AV84 as seed ortholog is 100%.

Group of orthologs #733. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:177 L.chalumnae:275

Q5K995              	100.00%		H3ATX2              	100.00%
Q5K9K6              	100.00%		M3XGW1              	100.00%
                    	       		H3B4E0              	47.35%
                    	       		H3B4R4              	32.00%
Bootstrap support for Q5K995 as seed ortholog is 99%.
Bootstrap support for Q5K9K6 as seed ortholog is 99%.
Bootstrap support for H3ATX2 as seed ortholog is 100%.
Bootstrap support for M3XGW1 as seed ortholog is 100%.

Group of orthologs #734. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 L.chalumnae:3

Q5KLQ6              	100.00%		H2ZXM3              	100.00%
                    	       		H3A009              	12.89%
                    	       		H3A9F1              	12.80%
Bootstrap support for Q5KLQ6 as seed ortholog is 100%.
Bootstrap support for H2ZXM3 as seed ortholog is 63%.
Alternative seed ortholog is H3ALS9 (3 bits away from this cluster)

Group of orthologs #735. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:78

Q5KDV8              	100.00%		H3ADM2              	100.00%
                    	       		H3BBI8              	52.76%
                    	       		H3A4Z3              	49.61%
Bootstrap support for Q5KDV8 as seed ortholog is 99%.
Bootstrap support for H3ADM2 as seed ortholog is 99%.

Group of orthologs #736. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 L.chalumnae:275

Q5KEX2              	100.00%		H3AD09              	100.00%
                    	       		H3BIN8              	54.39%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for H3AD09 as seed ortholog is 100%.

Group of orthologs #737. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:225 L.chalumnae:275

Q5KQ79              	100.00%		H3B744              	100.00%
                    	       		H3AMZ6              	40.24%
Bootstrap support for Q5KQ79 as seed ortholog is 100%.
Bootstrap support for H3B744 as seed ortholog is 100%.

Group of orthologs #738. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 L.chalumnae:275

Q5KLL4              	100.00%		H3BG01              	100.00%
                    	       		H3BE45              	50.92%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for H3BG01 as seed ortholog is 100%.

Group of orthologs #739. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:105

Q5KEY2              	100.00%		H3A8J7              	100.00%
Bootstrap support for Q5KEY2 as seed ortholog is 99%.
Bootstrap support for H3A8J7 as seed ortholog is 97%.

Group of orthologs #740. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 L.chalumnae:275

Q5KEZ6              	100.00%		H3ABL2              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for H3ABL2 as seed ortholog is 100%.

Group of orthologs #741. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 L.chalumnae:275

Q5KFH8              	100.00%		H3BB46              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for H3BB46 as seed ortholog is 100%.

Group of orthologs #742. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 L.chalumnae:274

Q5KPG1              	100.00%		H3BEY4              	100.00%
                    	       		M3XKL9              	17.42%
Bootstrap support for Q5KPG1 as seed ortholog is 100%.
Bootstrap support for H3BEY4 as seed ortholog is 100%.

Group of orthologs #743. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:121 L.chalumnae:59

Q5KEQ3              	100.00%		H2ZXC4              	100.00%
Bootstrap support for Q5KEQ3 as seed ortholog is 96%.
Bootstrap support for H2ZXC4 as seed ortholog is 92%.

Group of orthologs #744. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 L.chalumnae:48

Q5KI33              	100.00%		H3BB52              	100.00%
                    	       		H3AD58              	61.33%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for H3BB52 as seed ortholog is 85%.

Group of orthologs #745. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 L.chalumnae:273

Q5KBH5              	100.00%		H3BE03              	100.00%
Bootstrap support for Q5KBH5 as seed ortholog is 100%.
Bootstrap support for H3BE03 as seed ortholog is 100%.

Group of orthologs #746. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 L.chalumnae:272

Q5KCD9              	100.00%		H3A5W1              	100.00%
                    	       		H2ZX12              	55.15%
                    	       		H2ZXC7              	44.21%
Bootstrap support for Q5KCD9 as seed ortholog is 100%.
Bootstrap support for H3A5W1 as seed ortholog is 100%.

Group of orthologs #747. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:272

Q5KBK6              	100.00%		H3A313              	100.00%
                    	       		H3AG95              	51.15%
Bootstrap support for Q5KBK6 as seed ortholog is 98%.
Bootstrap support for H3A313 as seed ortholog is 100%.

Group of orthologs #748. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:182 L.chalumnae:181

Q5K7V7              	100.00%		H3BAC1              	100.00%
Bootstrap support for Q5K7V7 as seed ortholog is 100%.
Bootstrap support for H3BAC1 as seed ortholog is 100%.

Group of orthologs #749. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 L.chalumnae:272

Q5KH84              	100.00%		H3BBP1              	100.00%
Bootstrap support for Q5KH84 as seed ortholog is 100%.
Bootstrap support for H3BBP1 as seed ortholog is 100%.

Group of orthologs #750. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 L.chalumnae:101

Q5KLG9              	100.00%		H3B4I0              	100.00%
                    	       		H3A6F0              	37.99%
Bootstrap support for Q5KLG9 as seed ortholog is 100%.
Bootstrap support for H3B4I0 as seed ortholog is 97%.

Group of orthologs #751. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 L.chalumnae:271

Q5K9E9              	100.00%		H3AFT5              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for H3AFT5 as seed ortholog is 100%.

Group of orthologs #752. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 L.chalumnae:35

Q5KCL1              	100.00%		H3AM25              	100.00%
                    	       		H3AJ89              	73.60%
                    	       		H3BBJ4              	73.03%
                    	       		H3AB22              	55.30%
Bootstrap support for Q5KCL1 as seed ortholog is 100%.
Bootstrap support for H3AM25 as seed ortholog is 77%.

Group of orthologs #753. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:184 L.chalumnae:6

Q5K7H6              	100.00%		H3A399              	100.00%
                    	       		H3ACS8              	34.67%
                    	       		H3ACC4              	16.87%
Bootstrap support for Q5K7H6 as seed ortholog is 100%.
Bootstrap support for H3A399 as seed ortholog is 44%.
Alternative seed ortholog is H3AZR2 (6 bits away from this cluster)

Group of orthologs #754. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:152 L.chalumnae:105

Q5KAK1              	100.00%		H3B5I8              	100.00%
                    	       		H3B7S2              	28.79%
                    	       		H3BC57              	28.41%
Bootstrap support for Q5KAK1 as seed ortholog is 100%.
Bootstrap support for H3B5I8 as seed ortholog is 99%.

Group of orthologs #755. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 L.chalumnae:270

P0CO82              	100.00%		H3AIG7              	100.00%
                    	       		H3ABI1              	32.48%
Bootstrap support for P0CO82 as seed ortholog is 100%.
Bootstrap support for H3AIG7 as seed ortholog is 100%.

Group of orthologs #756. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:25 L.chalumnae:175

Q5K7E4              	100.00%		H3AQH8              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 63%.
Alternative seed ortholog is Q5KFT6 (25 bits away from this cluster)
Bootstrap support for H3AQH8 as seed ortholog is 99%.

Group of orthologs #757. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 L.chalumnae:269

Q5KJZ5              	100.00%		H3B2C6              	100.00%
                    	       		H3B651              	62.72%
                    	       		H3A2R8              	42.88%
                    	       		H3BDF5              	42.26%
                    	       		H3ACD1              	20.11%
                    	       		H3ADV3              	18.86%
                    	       		H3BBC6              	17.88%
                    	       		H3BIB1              	15.39%
                    	       		H3A2I8              	10.94%
                    	       		H2ZU77              	10.14%
                    	       		H3APZ2              	9.07%
                    	       		H3AZ25              	7.56%
                    	       		H2ZUJ3              	6.05%
Bootstrap support for Q5KJZ5 as seed ortholog is 100%.
Bootstrap support for H3B2C6 as seed ortholog is 100%.

Group of orthologs #758. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:121

Q5KH15              	100.00%		H3A1I1              	100.00%
                    	       		H3ARC4              	84.43%
                    	       		H3AU68              	81.56%
Bootstrap support for Q5KH15 as seed ortholog is 99%.
Bootstrap support for H3A1I1 as seed ortholog is 99%.

Group of orthologs #759. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 L.chalumnae:269

Q5KFG2              	100.00%		H2ZU07              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for H2ZU07 as seed ortholog is 100%.

Group of orthologs #760. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 L.chalumnae:269

Q5KGH4              	100.00%		H3ABX2              	100.00%
Bootstrap support for Q5KGH4 as seed ortholog is 100%.
Bootstrap support for H3ABX2 as seed ortholog is 100%.

Group of orthologs #761. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 L.chalumnae:268

Q5KEW8              	100.00%		H2ZYU5              	100.00%
Q5KD36              	32.65%		
Q5KDR9              	32.14%		
Bootstrap support for Q5KEW8 as seed ortholog is 100%.
Bootstrap support for H2ZYU5 as seed ortholog is 100%.

Group of orthologs #762. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 L.chalumnae:268

Q5KC15              	100.00%		H2ZVL3              	100.00%
Bootstrap support for Q5KC15 as seed ortholog is 100%.
Bootstrap support for H2ZVL3 as seed ortholog is 100%.

Group of orthologs #763. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 L.chalumnae:268

P0CN24              	100.00%		H3B8I2              	100.00%
Bootstrap support for P0CN24 as seed ortholog is 100%.
Bootstrap support for H3B8I2 as seed ortholog is 100%.

Group of orthologs #764. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 L.chalumnae:268

Q5KKJ4              	100.00%		H3B6W0              	100.00%
Bootstrap support for Q5KKJ4 as seed ortholog is 100%.
Bootstrap support for H3B6W0 as seed ortholog is 100%.

Group of orthologs #765. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:218 L.chalumnae:267

P0CO48              	100.00%		H3AHP7              	100.00%
Bootstrap support for P0CO48 as seed ortholog is 99%.
Bootstrap support for H3AHP7 as seed ortholog is 100%.

Group of orthologs #766. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 L.chalumnae:267

Q5KPE8              	100.00%		H3B6A1              	100.00%
Bootstrap support for Q5KPE8 as seed ortholog is 100%.
Bootstrap support for H3B6A1 as seed ortholog is 100%.

Group of orthologs #767. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:167

Q5KAY9              	100.00%		H3A953              	100.00%
Q5KQ59              	100.00%		H2ZZH4              	100.00%
                    	       		H3ACP8              	50.97%
Bootstrap support for Q5KAY9 as seed ortholog is 100%.
Bootstrap support for Q5KQ59 as seed ortholog is 100%.
Bootstrap support for H3A953 as seed ortholog is 99%.
Bootstrap support for H2ZZH4 as seed ortholog is 98%.

Group of orthologs #768. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:266

Q5K936              	100.00%		H3AKX9              	100.00%
                    	       		H3AMU7              	21.44%
Bootstrap support for Q5K936 as seed ortholog is 100%.
Bootstrap support for H3AKX9 as seed ortholog is 100%.

Group of orthologs #769. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:152

Q5KI67              	100.00%		H3AF51              	100.00%
                    	       		H3BAV6              	20.95%
Bootstrap support for Q5KI67 as seed ortholog is 100%.
Bootstrap support for H3AF51 as seed ortholog is 100%.

Group of orthologs #770. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:266

Q5K7Y1              	100.00%		H2ZT65              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 100%.
Bootstrap support for H2ZT65 as seed ortholog is 100%.

Group of orthologs #771. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:266

Q5K9K4              	100.00%		H3A0W1              	100.00%
Bootstrap support for Q5K9K4 as seed ortholog is 100%.
Bootstrap support for H3A0W1 as seed ortholog is 100%.

Group of orthologs #772. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:266

Q5KCK3              	100.00%		H3BD20              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for H3BD20 as seed ortholog is 100%.

Group of orthologs #773. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 L.chalumnae:266

Q5KIP3              	100.00%		H3BID1              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for H3BID1 as seed ortholog is 100%.

Group of orthologs #774. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:265

Q5K6Y3              	100.00%		H2ZSG1              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for H2ZSG1 as seed ortholog is 100%.

Group of orthologs #775. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:160

P0CR16              	100.00%		H3AVJ8              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 100%.
Bootstrap support for H3AVJ8 as seed ortholog is 100%.

Group of orthologs #776. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:265

Q5KLV9              	100.00%		H3AFR1              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for H3AFR1 as seed ortholog is 100%.

Group of orthologs #777. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:265

Q5KBR5              	100.00%		H3AV89              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for H3AV89 as seed ortholog is 100%.

Group of orthologs #778. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:265

Q5KMI8              	100.00%		H3AVQ4              	100.00%
Bootstrap support for Q5KMI8 as seed ortholog is 100%.
Bootstrap support for H3AVQ4 as seed ortholog is 100%.

Group of orthologs #779. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 L.chalumnae:265

Q5KMV8              	100.00%		H3B346              	100.00%
Bootstrap support for Q5KMV8 as seed ortholog is 100%.
Bootstrap support for H3B346 as seed ortholog is 100%.

Group of orthologs #780. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:187 L.chalumnae:264

Q5KG91              	100.00%		H2ZYR2              	100.00%
                    	       		H3B516              	42.29%
Bootstrap support for Q5KG91 as seed ortholog is 99%.
Bootstrap support for H2ZYR2 as seed ortholog is 100%.

Group of orthologs #781. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 L.chalumnae:264

Q5KPL0              	100.00%		M3XK92              	100.00%
                    	       		M3XK49              	65.76%
Bootstrap support for Q5KPL0 as seed ortholog is 100%.
Bootstrap support for M3XK92 as seed ortholog is 100%.

Group of orthologs #782. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 L.chalumnae:134

Q5K9I3              	100.00%		H3B3Q1              	100.00%
Bootstrap support for Q5K9I3 as seed ortholog is 100%.
Bootstrap support for H3B3Q1 as seed ortholog is 99%.

Group of orthologs #783. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:212 L.chalumnae:155

Q5KC50              	100.00%		H3A6P1              	100.00%
Bootstrap support for Q5KC50 as seed ortholog is 100%.
Bootstrap support for H3A6P1 as seed ortholog is 100%.

Group of orthologs #784. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:58 L.chalumnae:263

Q5KJV3              	100.00%		H3A0R9              	100.00%
Bootstrap support for Q5KJV3 as seed ortholog is 89%.
Bootstrap support for H3A0R9 as seed ortholog is 100%.

Group of orthologs #785. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:39 L.chalumnae:262

Q5KLT3              	100.00%		H2ZYK7              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 88%.
Bootstrap support for H2ZYK7 as seed ortholog is 100%.

Group of orthologs #786. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 L.chalumnae:262

Q5KD80              	100.00%		H3BHX9              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for H3BHX9 as seed ortholog is 100%.

Group of orthologs #787. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:21 L.chalumnae:55

Q5KCH7              	100.00%		H3A6I1              	100.00%
                    	       		H3BH41              	37.42%
                    	       		H3AT43              	5.82%
                    	       		H3BBR2              	5.82%
                    	       		H2ZZN6              	5.82%
Bootstrap support for Q5KCH7 as seed ortholog is 71%.
Alternative seed ortholog is Q5KB17 (21 bits away from this cluster)
Bootstrap support for H3A6I1 as seed ortholog is 94%.

Group of orthologs #788. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 L.chalumnae:261

Q5K8Q5              	100.00%		H3B1W4              	100.00%
                    	       		H3AAP0              	61.08%
                    	       		H2ZRP5              	9.58%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for H3B1W4 as seed ortholog is 100%.

Group of orthologs #789. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 L.chalumnae:261

Q5KML9              	100.00%		H3ATL4              	100.00%
                    	       		H2ZVD5              	58.62%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for H3ATL4 as seed ortholog is 100%.

Group of orthologs #790. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 L.chalumnae:137

Q5KLW0              	100.00%		H3BDP3              	100.00%
Bootstrap support for Q5KLW0 as seed ortholog is 100%.
Bootstrap support for H3BDP3 as seed ortholog is 99%.

Group of orthologs #791. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 L.chalumnae:260

Q5K8A5              	100.00%		H2ZV09              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for H2ZV09 as seed ortholog is 100%.

Group of orthologs #792. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 L.chalumnae:260

Q5K6T5              	100.00%		H3B1N4              	100.00%
Bootstrap support for Q5K6T5 as seed ortholog is 100%.
Bootstrap support for H3B1N4 as seed ortholog is 100%.

Group of orthologs #793. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 L.chalumnae:46

Q5KMM7              	100.00%		H3ANZ3              	100.00%
Bootstrap support for Q5KMM7 as seed ortholog is 100%.
Bootstrap support for H3ANZ3 as seed ortholog is 78%.

Group of orthologs #794. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 L.chalumnae:46

Q5KG75              	100.00%		H3ASI3              	100.00%
                    	       		H3B6Q6              	36.46%
Bootstrap support for Q5KG75 as seed ortholog is 100%.
Bootstrap support for H3ASI3 as seed ortholog is 87%.

Group of orthologs #795. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 L.chalumnae:259

Q5KEG8              	100.00%		H3A5H3              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for H3A5H3 as seed ortholog is 100%.

Group of orthologs #796. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:83

Q5K9W3              	100.00%		H3AJC1              	100.00%
Bootstrap support for Q5K9W3 as seed ortholog is 99%.
Bootstrap support for H3AJC1 as seed ortholog is 99%.

Group of orthologs #797. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 L.chalumnae:259

Q5KA19              	100.00%		H3AQL2              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for H3AQL2 as seed ortholog is 100%.

Group of orthologs #798. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 L.chalumnae:259

Q5KK81              	100.00%		H3BAQ1              	100.00%
Bootstrap support for Q5KK81 as seed ortholog is 100%.
Bootstrap support for H3BAQ1 as seed ortholog is 100%.

Group of orthologs #799. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:258

Q5KFR5              	100.00%		H2ZWG3              	100.00%
Bootstrap support for Q5KFR5 as seed ortholog is 99%.
Bootstrap support for H2ZWG3 as seed ortholog is 100%.

Group of orthologs #800. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:258

Q5KFI9              	100.00%		H3A1D0              	100.00%
Bootstrap support for Q5KFI9 as seed ortholog is 91%.
Bootstrap support for H3A1D0 as seed ortholog is 100%.

Group of orthologs #801. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 L.chalumnae:258

Q5KHK1              	100.00%		H3AHH4              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for H3AHH4 as seed ortholog is 100%.

Group of orthologs #802. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 L.chalumnae:258

Q5KCW2              	100.00%		M3XK43              	100.00%
Bootstrap support for Q5KCW2 as seed ortholog is 100%.
Bootstrap support for M3XK43 as seed ortholog is 100%.

Group of orthologs #803. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 L.chalumnae:152

Q5KJD3              	100.00%		H3A2W5              	100.00%
Bootstrap support for Q5KJD3 as seed ortholog is 100%.
Bootstrap support for H3A2W5 as seed ortholog is 99%.

Group of orthologs #804. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 L.chalumnae:153

Q5KBQ7              	100.00%		H3AEH1              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for H3AEH1 as seed ortholog is 99%.

Group of orthologs #805. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 L.chalumnae:257

P0CN92              	100.00%		H3ATY4              	100.00%
Bootstrap support for P0CN92 as seed ortholog is 100%.
Bootstrap support for H3ATY4 as seed ortholog is 100%.

Group of orthologs #806. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:115

Q5KKF5              	100.00%		H3ASF2              	100.00%
Bootstrap support for Q5KKF5 as seed ortholog is 99%.
Bootstrap support for H3ASF2 as seed ortholog is 99%.

Group of orthologs #807. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:209 L.chalumnae:156

Q5KGT7              	100.00%		H2ZZ84              	100.00%
Q5K9Z3              	34.35%		
Bootstrap support for Q5KGT7 as seed ortholog is 100%.
Bootstrap support for H2ZZ84 as seed ortholog is 100%.

Group of orthologs #808. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 L.chalumnae:256

Q5K7P6              	100.00%		H3A712              	100.00%
Bootstrap support for Q5K7P6 as seed ortholog is 100%.
Bootstrap support for H3A712 as seed ortholog is 100%.

Group of orthologs #809. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 L.chalumnae:256

Q5K8G6              	100.00%		H3B1T9              	100.00%
Bootstrap support for Q5K8G6 as seed ortholog is 100%.
Bootstrap support for H3B1T9 as seed ortholog is 100%.

Group of orthologs #810. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 L.chalumnae:256

Q5KKR0              	100.00%		H3AXW3              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for H3AXW3 as seed ortholog is 100%.

Group of orthologs #811. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 L.chalumnae:255

Q5KFM4              	100.00%		H2ZWS6              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for H2ZWS6 as seed ortholog is 100%.

Group of orthologs #812. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:28

Q5KF72              	100.00%		H3A7H1              	100.00%
Bootstrap support for Q5KF72 as seed ortholog is 99%.
Bootstrap support for H3A7H1 as seed ortholog is 93%.

Group of orthologs #813. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 L.chalumnae:255

Q5KIF8              	100.00%		H3A461              	100.00%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for H3A461 as seed ortholog is 100%.

Group of orthologs #814. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 L.chalumnae:7

Q5KK51              	100.00%		H3AV21              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for H3AV21 as seed ortholog is 56%.
Alternative seed ortholog is H3ASC2 (7 bits away from this cluster)

Group of orthologs #815. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 L.chalumnae:255

Q5KIM1              	100.00%		H3BCU7              	100.00%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for H3BCU7 as seed ortholog is 100%.

Group of orthologs #816. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 L.chalumnae:254

Q5KMA6              	100.00%		H3A915              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for H3A915 as seed ortholog is 100%.

Group of orthologs #817. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 L.chalumnae:10

Q5K9R8              	100.00%		H3ASZ7              	100.00%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for H3ASZ7 as seed ortholog is 56%.
Alternative seed ortholog is H3BCW4 (10 bits away from this cluster)

Group of orthologs #818. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 L.chalumnae:254

Q5KH62              	100.00%		M3XH26              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for M3XH26 as seed ortholog is 100%.

Group of orthologs #819. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:105 L.chalumnae:44

Q5KQ29              	100.00%		H3BE21              	100.00%
Bootstrap support for Q5KQ29 as seed ortholog is 98%.
Bootstrap support for H3BE21 as seed ortholog is 80%.

Group of orthologs #820. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 L.chalumnae:253

Q5KNJ8              	100.00%		H2ZY92              	100.00%
                    	       		H3APQ7              	64.94%
                    	       		H3ACW3              	57.08%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for H2ZY92 as seed ortholog is 100%.

Group of orthologs #821. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:53

Q5KK41              	100.00%		H3AWA9              	100.00%
                    	       		H3ABH0              	17.61%
Bootstrap support for Q5KK41 as seed ortholog is 100%.
Bootstrap support for H3AWA9 as seed ortholog is 99%.

Group of orthologs #822. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 L.chalumnae:253

Q5KH08              	100.00%		H3AAR1              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for H3AAR1 as seed ortholog is 100%.

Group of orthologs #823. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 L.chalumnae:253

Q5KGP7              	100.00%		H3AQY9              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for H3AQY9 as seed ortholog is 100%.

Group of orthologs #824. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 L.chalumnae:253

Q5KJC9              	100.00%		H3B6D3              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for H3B6D3 as seed ortholog is 100%.

Group of orthologs #825. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 L.chalumnae:76

Q5KFC1              	100.00%		H3ADW2              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 100%.
Bootstrap support for H3ADW2 as seed ortholog is 96%.

Group of orthologs #826. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 L.chalumnae:252

Q5KGL6              	100.00%		H3ARF9              	100.00%
Bootstrap support for Q5KGL6 as seed ortholog is 100%.
Bootstrap support for H3ARF9 as seed ortholog is 100%.

Group of orthologs #827. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 L.chalumnae:86

Q5KFT0              	100.00%		H3B8Y2              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for H3B8Y2 as seed ortholog is 99%.

Group of orthologs #828. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 L.chalumnae:251

P0CM40              	100.00%		H3AMI7              	100.00%
                    	       		H3AVP3              	52.22%
Bootstrap support for P0CM40 as seed ortholog is 100%.
Bootstrap support for H3AMI7 as seed ortholog is 100%.

Group of orthologs #829. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 L.chalumnae:147

Q5KLY0              	100.00%		H3AYP5              	100.00%
Bootstrap support for Q5KLY0 as seed ortholog is 100%.
Bootstrap support for H3AYP5 as seed ortholog is 99%.

Group of orthologs #830. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:105 L.chalumnae:251

Q5KMV4              	100.00%		H3BGA5              	100.00%
Bootstrap support for Q5KMV4 as seed ortholog is 98%.
Bootstrap support for H3BGA5 as seed ortholog is 100%.

Group of orthologs #831. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:158 L.chalumnae:137

P0CR30              	100.00%		H3ARJ2              	100.00%
                    	       		H3BBT9              	19.87%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for H3ARJ2 as seed ortholog is 100%.

Group of orthologs #832. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 L.chalumnae:250

Q5KLE7              	100.00%		H3AX99              	100.00%
                    	       		M3XGH3              	44.71%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for H3AX99 as seed ortholog is 100%.

Group of orthologs #833. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:126 L.chalumnae:94

Q5KJK0              	100.00%		M3XI55              	100.00%
                    	       		H3A7Z6              	45.78%
Bootstrap support for Q5KJK0 as seed ortholog is 100%.
Bootstrap support for M3XI55 as seed ortholog is 100%.

Group of orthologs #834. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 L.chalumnae:250

Q5KGF3              	100.00%		H2ZSL4              	100.00%
Bootstrap support for Q5KGF3 as seed ortholog is 100%.
Bootstrap support for H2ZSL4 as seed ortholog is 100%.

Group of orthologs #835. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:77 L.chalumnae:154

Q5KBI5              	100.00%		H3A1I3              	100.00%
Bootstrap support for Q5KBI5 as seed ortholog is 99%.
Bootstrap support for H3A1I3 as seed ortholog is 100%.

Group of orthologs #836. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 L.chalumnae:250

Q5KIN9              	100.00%		H3AJU8              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for H3AJU8 as seed ortholog is 100%.

Group of orthologs #837. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 L.chalumnae:250

Q5KBS3              	100.00%		H3B6V8              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for H3B6V8 as seed ortholog is 100%.

Group of orthologs #838. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 L.chalumnae:248

Q5KQ96              	100.00%		H3BF37              	100.00%
                    	       		H3AC34              	52.14%
Bootstrap support for Q5KQ96 as seed ortholog is 100%.
Bootstrap support for H3BF37 as seed ortholog is 100%.

Group of orthologs #839. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 L.chalumnae:248

Q5KLE6              	100.00%		H3ACR5              	100.00%
Bootstrap support for Q5KLE6 as seed ortholog is 100%.
Bootstrap support for H3ACR5 as seed ortholog is 100%.

Group of orthologs #840. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 L.chalumnae:248

Q5K7F0              	100.00%		H3B6L0              	100.00%
Bootstrap support for Q5K7F0 as seed ortholog is 100%.
Bootstrap support for H3B6L0 as seed ortholog is 100%.

Group of orthologs #841. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 L.chalumnae:178

P0CO44              	100.00%		H3BGM9              	100.00%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for H3BGM9 as seed ortholog is 100%.

Group of orthologs #842. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 L.chalumnae:247

Q5K9I2              	100.00%		H2ZSP1              	100.00%
                    	       		H3BD58              	29.60%
Bootstrap support for Q5K9I2 as seed ortholog is 100%.
Bootstrap support for H2ZSP1 as seed ortholog is 100%.

Group of orthologs #843. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 L.chalumnae:247

Q5KJB8              	100.00%		H3A081              	100.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for H3A081 as seed ortholog is 100%.

Group of orthologs #844. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 L.chalumnae:247

P0CM14              	100.00%		H3ANW2              	100.00%
Bootstrap support for P0CM14 as seed ortholog is 100%.
Bootstrap support for H3ANW2 as seed ortholog is 100%.

Group of orthologs #845. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 L.chalumnae:247

Q5K9I0              	100.00%		H3AJU0              	100.00%
Bootstrap support for Q5K9I0 as seed ortholog is 100%.
Bootstrap support for H3AJU0 as seed ortholog is 100%.

Group of orthologs #846. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 L.chalumnae:247

Q5KBX4              	100.00%		H3AX24              	100.00%
Bootstrap support for Q5KBX4 as seed ortholog is 100%.
Bootstrap support for H3AX24 as seed ortholog is 100%.

Group of orthologs #847. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 L.chalumnae:112

Q5KN42              	100.00%		H3AUA4              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for H3AUA4 as seed ortholog is 99%.

Group of orthologs #848. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 L.chalumnae:246

Q5K902              	100.00%		H3AFA6              	100.00%
Bootstrap support for Q5K902 as seed ortholog is 100%.
Bootstrap support for H3AFA6 as seed ortholog is 100%.

Group of orthologs #849. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 L.chalumnae:246

Q5KL66              	100.00%		H3AM99              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for H3AM99 as seed ortholog is 100%.

Group of orthologs #850. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 L.chalumnae:245

Q5KAJ1              	100.00%		H2ZWA3              	100.00%
                    	       		H3ATM2              	54.86%
                    	       		H3AZ43              	32.12%
                    	       		H3B9Y7              	30.02%
Bootstrap support for Q5KAJ1 as seed ortholog is 100%.
Bootstrap support for H2ZWA3 as seed ortholog is 100%.

Group of orthologs #851. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:80 L.chalumnae:45

P0CO04              	100.00%		H3A4Q6              	100.00%
Q5KMT3              	33.33%		H3B1Y8              	65.00%
Bootstrap support for P0CO04 as seed ortholog is 99%.
Bootstrap support for H3A4Q6 as seed ortholog is 99%.

Group of orthologs #852. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 L.chalumnae:245

P0CP30              	100.00%		H3BGJ8              	100.00%
Bootstrap support for P0CP30 as seed ortholog is 100%.
Bootstrap support for H3BGJ8 as seed ortholog is 100%.

Group of orthologs #853. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 L.chalumnae:245

Q5KAP5              	100.00%		H3BIG3              	100.00%
Bootstrap support for Q5KAP5 as seed ortholog is 100%.
Bootstrap support for H3BIG3 as seed ortholog is 100%.

Group of orthologs #854. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:146

Q5KGN7              	100.00%		H3BHL9              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for H3BHL9 as seed ortholog is 100%.

Group of orthologs #855. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 L.chalumnae:104

P0CS66              	100.00%		H2ZYS6              	100.00%
                    	       		H3B897              	31.39%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for H2ZYS6 as seed ortholog is 97%.

Group of orthologs #856. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:175 L.chalumnae:244

Q5KDE0              	100.00%		H3AAK4              	100.00%
                    	       		H3BDU0              	18.44%
Bootstrap support for Q5KDE0 as seed ortholog is 99%.
Bootstrap support for H3AAK4 as seed ortholog is 100%.

Group of orthologs #857. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 L.chalumnae:244

Q5KLK2              	100.00%		H3AC76              	100.00%
                    	       		M3XL92              	44.62%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for H3AC76 as seed ortholog is 100%.

Group of orthologs #858. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 L.chalumnae:244

Q5KJ50              	100.00%		H2ZYA3              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for H2ZYA3 as seed ortholog is 100%.

Group of orthologs #859. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 L.chalumnae:244

Q5KJU9              	100.00%		H3A5Q2              	100.00%
Bootstrap support for Q5KJU9 as seed ortholog is 100%.
Bootstrap support for H3A5Q2 as seed ortholog is 100%.

Group of orthologs #860. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:79 L.chalumnae:78

P0CP82              	100.00%		H3BFJ0              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 99%.
Bootstrap support for H3BFJ0 as seed ortholog is 99%.

Group of orthologs #861. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 L.chalumnae:22

Q5K8T9              	100.00%		H2ZVB6              	100.00%
                    	       		H3A489              	5.92%
Bootstrap support for Q5K8T9 as seed ortholog is 100%.
Bootstrap support for H2ZVB6 as seed ortholog is 56%.
Alternative seed ortholog is M3XJ11 (22 bits away from this cluster)

Group of orthologs #862. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 L.chalumnae:242

Q5KP63              	100.00%		H3B466              	100.00%
                    	       		H3BEE7              	49.55%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for H3B466 as seed ortholog is 100%.

Group of orthologs #863. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 L.chalumnae:242

Q5KA10              	100.00%		H3AY26              	100.00%
Bootstrap support for Q5KA10 as seed ortholog is 100%.
Bootstrap support for H3AY26 as seed ortholog is 100%.

Group of orthologs #864. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 L.chalumnae:242

Q5KAL7              	100.00%		H3AYW0              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for H3AYW0 as seed ortholog is 100%.

Group of orthologs #865. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:143

Q5KEK2              	100.00%		H3BBM0              	100.00%
Bootstrap support for Q5KEK2 as seed ortholog is 99%.
Bootstrap support for H3BBM0 as seed ortholog is 99%.

Group of orthologs #866. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 L.chalumnae:104

Q5KQ20              	100.00%		H3B3T1              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for H3B3T1 as seed ortholog is 97%.

Group of orthologs #867. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:33

Q5KCQ7              	100.00%		H3AND5              	100.00%
                    	       		H3ANI9              	100.00%
Bootstrap support for Q5KCQ7 as seed ortholog is 99%.
Bootstrap support for H3AND5 as seed ortholog is 91%.
Bootstrap support for H3ANI9 as seed ortholog is 92%.

Group of orthologs #868. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 L.chalumnae:240

Q5KPR1              	100.00%		H2ZZ41              	100.00%
Bootstrap support for Q5KPR1 as seed ortholog is 100%.
Bootstrap support for H2ZZ41 as seed ortholog is 100%.

Group of orthologs #869. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 L.chalumnae:28

Q5KE11              	100.00%		H3ABX5              	100.00%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for H3ABX5 as seed ortholog is 94%.

Group of orthologs #870. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:71

Q5KBE3              	100.00%		H3ASR1              	100.00%
Bootstrap support for Q5KBE3 as seed ortholog is 99%.
Bootstrap support for H3ASR1 as seed ortholog is 92%.

Group of orthologs #871. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 L.chalumnae:240

P0CO14              	100.00%		H3BBN3              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for H3BBN3 as seed ortholog is 100%.

Group of orthologs #872. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 L.chalumnae:240

Q5KEH0              	100.00%		H3BEE4              	100.00%
Bootstrap support for Q5KEH0 as seed ortholog is 100%.
Bootstrap support for H3BEE4 as seed ortholog is 100%.

Group of orthologs #873. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:116 L.chalumnae:124

P0CS16              	100.00%		H3ANU5              	100.00%
                    	       		M3XHT1              	93.51%
                    	       		H3B917              	84.42%
Bootstrap support for P0CS16 as seed ortholog is 100%.
Bootstrap support for H3ANU5 as seed ortholog is 100%.

Group of orthologs #874. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 L.chalumnae:239

Q5KGF9              	100.00%		H3A0A8              	100.00%
                    	       		H3BHW4              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for H3A0A8 as seed ortholog is 100%.
Bootstrap support for H3BHW4 as seed ortholog is 100%.

Group of orthologs #875. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:77 L.chalumnae:28

P0CQ42              	100.00%		H3AZ40              	100.00%
                    	       		H3BC69              	21.05%
Bootstrap support for P0CQ42 as seed ortholog is 99%.
Bootstrap support for H3AZ40 as seed ortholog is 90%.

Group of orthologs #876. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 L.chalumnae:239

Q5KA36              	100.00%		H3AD61              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for H3AD61 as seed ortholog is 100%.

Group of orthologs #877. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 L.chalumnae:239

Q5KCD5              	100.00%		H3ABJ6              	100.00%
Bootstrap support for Q5KCD5 as seed ortholog is 100%.
Bootstrap support for H3ABJ6 as seed ortholog is 100%.

Group of orthologs #878. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 L.chalumnae:239

Q5KBW9              	100.00%		H3B3U1              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for H3B3U1 as seed ortholog is 100%.

Group of orthologs #879. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 L.chalumnae:239

Q5K8R7              	100.00%		H3BEJ6              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for H3BEJ6 as seed ortholog is 100%.

Group of orthologs #880. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 L.chalumnae:96

Q5KAD8              	100.00%		M3XHJ3              	100.00%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for M3XHJ3 as seed ortholog is 73%.
Alternative seed ortholog is H3ATK7 (96 bits away from this cluster)

Group of orthologs #881. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 L.chalumnae:238

Q5K726              	100.00%		H3AG32              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for H3AG32 as seed ortholog is 100%.

Group of orthologs #882. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 L.chalumnae:237

P0CN20              	100.00%		H3AE33              	100.00%
Bootstrap support for P0CN20 as seed ortholog is 100%.
Bootstrap support for H3AE33 as seed ortholog is 100%.

Group of orthologs #883. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 L.chalumnae:237

Q5KHA2              	100.00%		H3AP59              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for H3AP59 as seed ortholog is 100%.

Group of orthologs #884. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 L.chalumnae:156

Q5KGI2              	100.00%		H3BI16              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for H3BI16 as seed ortholog is 99%.

Group of orthologs #885. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:39

Q5KMM0              	100.00%		H3ARE9              	100.00%
Q5KML4              	43.61%		H3ASV3              	9.89%
Bootstrap support for Q5KMM0 as seed ortholog is 97%.
Bootstrap support for H3ARE9 as seed ortholog is 94%.

Group of orthologs #886. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:145

Q5KHD3              	100.00%		H3AU78              	100.00%
                    	       		H3B227              	36.29%
Bootstrap support for Q5KHD3 as seed ortholog is 99%.
Bootstrap support for H3AU78 as seed ortholog is 99%.

Group of orthologs #887. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 L.chalumnae:236

Q5KL73              	100.00%		H3AXU6              	100.00%
                    	       		H3AFM2              	41.69%
Bootstrap support for Q5KL73 as seed ortholog is 100%.
Bootstrap support for H3AXU6 as seed ortholog is 100%.

Group of orthologs #888. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 L.chalumnae:236

P0CN10              	100.00%		H3A597              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for H3A597 as seed ortholog is 100%.

Group of orthologs #889. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 L.chalumnae:236

P0CN40              	100.00%		H3ADK8              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for H3ADK8 as seed ortholog is 100%.

Group of orthologs #890. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 L.chalumnae:236

Q5KCJ9              	100.00%		M3XJU4              	100.00%
Bootstrap support for Q5KCJ9 as seed ortholog is 100%.
Bootstrap support for M3XJU4 as seed ortholog is 100%.

Group of orthologs #891. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 L.chalumnae:235

Q5KC07              	100.00%		H3A9F9              	100.00%
Bootstrap support for Q5KC07 as seed ortholog is 100%.
Bootstrap support for H3A9F9 as seed ortholog is 100%.

Group of orthologs #892. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 L.chalumnae:235

Q5KND4              	100.00%		H3AX22              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for H3AX22 as seed ortholog is 100%.

Group of orthologs #893. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 L.chalumnae:235

Q5KQ17              	100.00%		H3B6W2              	100.00%
Bootstrap support for Q5KQ17 as seed ortholog is 100%.
Bootstrap support for H3B6W2 as seed ortholog is 100%.

Group of orthologs #894. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 L.chalumnae:234

Q5KP78              	100.00%		H3BDU3              	100.00%
Q5KP94              	40.71%		H3A733              	34.09%
Bootstrap support for Q5KP78 as seed ortholog is 100%.
Bootstrap support for H3BDU3 as seed ortholog is 100%.

Group of orthologs #895. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:47

P0CS76              	100.00%		H3A696              	100.00%
                    	       		H3BFG6              	28.24%
Bootstrap support for P0CS76 as seed ortholog is 99%.
Bootstrap support for H3A696 as seed ortholog is 87%.

Group of orthologs #896. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 L.chalumnae:234

Q5KJG1              	100.00%		H3A140              	100.00%
                    	       		H3A948              	46.03%
Bootstrap support for Q5KJG1 as seed ortholog is 100%.
Bootstrap support for H3A140 as seed ortholog is 100%.

Group of orthologs #897. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:119

Q5K7V8              	100.00%		H2ZW35              	100.00%
                    	       		H3AYG8              	51.59%
                    	       		H2ZWJ1              	44.40%
                    	       		H2ZXL5              	10.78%
Bootstrap support for Q5K7V8 as seed ortholog is 56%.
Alternative seed ortholog is Q5K913 (114 bits away from this cluster)
Bootstrap support for H2ZW35 as seed ortholog is 99%.

Group of orthologs #898. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 L.chalumnae:138

P40909              	100.00%		H3AHU2              	100.00%
                    	       		H3A2K8              	12.39%
Bootstrap support for P40909 as seed ortholog is 100%.
Bootstrap support for H3AHU2 as seed ortholog is 100%.

Group of orthologs #899. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 L.chalumnae:233

Q5KA21              	100.00%		H2ZZG3              	100.00%
Bootstrap support for Q5KA21 as seed ortholog is 100%.
Bootstrap support for H2ZZG3 as seed ortholog is 100%.

Group of orthologs #900. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 L.chalumnae:233

Q5KPJ7              	100.00%		H2ZSH0              	100.00%
Bootstrap support for Q5KPJ7 as seed ortholog is 100%.
Bootstrap support for H2ZSH0 as seed ortholog is 100%.

Group of orthologs #901. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:99

Q5KGY4              	100.00%		H3A6N9              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 98%.
Bootstrap support for H3A6N9 as seed ortholog is 99%.

Group of orthologs #902. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:233

P0CP80              	100.00%		H3B2Z2              	100.00%
Bootstrap support for P0CP80 as seed ortholog is 97%.
Bootstrap support for H3B2Z2 as seed ortholog is 100%.

Group of orthologs #903. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 L.chalumnae:233

Q5KK16              	100.00%		H3BCB1              	100.00%
Bootstrap support for Q5KK16 as seed ortholog is 100%.
Bootstrap support for H3BCB1 as seed ortholog is 100%.

Group of orthologs #904. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:232

Q5KKJ1              	100.00%		H2ZUL1              	100.00%
Q5KCW7              	9.38%		
Bootstrap support for Q5KKJ1 as seed ortholog is 100%.
Bootstrap support for H2ZUL1 as seed ortholog is 100%.

Group of orthologs #905. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:232

Q5KJN6              	100.00%		H3A828              	100.00%
                    	       		H3B5M1              	11.00%
Bootstrap support for Q5KJN6 as seed ortholog is 100%.
Bootstrap support for H3A828 as seed ortholog is 100%.

Group of orthologs #906. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:232

Q5KAQ6              	100.00%		H3AX70              	100.00%
                    	       		H3AP07              	71.99%
Bootstrap support for Q5KAQ6 as seed ortholog is 100%.
Bootstrap support for H3AX70 as seed ortholog is 100%.

Group of orthologs #907. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:232

P0CO46              	100.00%		H3A7I4              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for H3A7I4 as seed ortholog is 100%.

Group of orthologs #908. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:178

Q5K974              	100.00%		H3A4V6              	100.00%
Bootstrap support for Q5K974 as seed ortholog is 100%.
Bootstrap support for H3A4V6 as seed ortholog is 100%.

Group of orthologs #909. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:232

Q5KIJ7              	100.00%		H3AC07              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for H3AC07 as seed ortholog is 100%.

Group of orthologs #910. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 L.chalumnae:232

Q5KFQ7              	100.00%		H3BHK5              	100.00%
Bootstrap support for Q5KFQ7 as seed ortholog is 100%.
Bootstrap support for H3BHK5 as seed ortholog is 100%.

Group of orthologs #911. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 L.chalumnae:141

Q5KJK3              	100.00%		H2ZWB2              	100.00%
Bootstrap support for Q5KJK3 as seed ortholog is 100%.
Bootstrap support for H2ZWB2 as seed ortholog is 99%.

Group of orthologs #912. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:50

Q5KH94              	100.00%		H3AY00              	100.00%
Q5KI95              	46.57%		H3AC26              	22.90%
                    	       		H3BE97              	11.79%
                    	       		H3AKS6              	10.66%
Bootstrap support for Q5KH94 as seed ortholog is 99%.
Bootstrap support for H3AY00 as seed ortholog is 90%.

Group of orthologs #913. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:103 L.chalumnae:55

Q5K833              	100.00%		H2ZTZ0              	100.00%
Q5K840              	77.84%		
Bootstrap support for Q5K833 as seed ortholog is 99%.
Bootstrap support for H2ZTZ0 as seed ortholog is 93%.

Group of orthologs #914. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 L.chalumnae:230

Q5KBT6              	100.00%		H3A8B6              	100.00%
Bootstrap support for Q5KBT6 as seed ortholog is 100%.
Bootstrap support for H3A8B6 as seed ortholog is 100%.

Group of orthologs #915. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 L.chalumnae:230

Q5KG39              	100.00%		H3B798              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for H3B798 as seed ortholog is 100%.

Group of orthologs #916. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:116

Q5KNZ3              	100.00%		H3BBV9              	100.00%
                    	       		H3B7V4              	28.06%
Bootstrap support for Q5KNZ3 as seed ortholog is 99%.
Bootstrap support for H3BBV9 as seed ortholog is 99%.

Group of orthologs #917. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 L.chalumnae:229

Q5KML5              	100.00%		H3A9G4              	100.00%
Bootstrap support for Q5KML5 as seed ortholog is 100%.
Bootstrap support for H3A9G4 as seed ortholog is 100%.

Group of orthologs #918. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 L.chalumnae:229

Q5KHZ3              	100.00%		H3ANB9              	100.00%
Bootstrap support for Q5KHZ3 as seed ortholog is 100%.
Bootstrap support for H3ANB9 as seed ortholog is 100%.

Group of orthologs #919. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:95

Q5KF50              	100.00%		H3AZR3              	100.00%
Bootstrap support for Q5KF50 as seed ortholog is 99%.
Bootstrap support for H3AZR3 as seed ortholog is 99%.

Group of orthologs #920. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KLA2              	100.00%		H3AQ52              	100.00%
                    	       		H3AGM9              	27.38%
Bootstrap support for Q5KLA2 as seed ortholog is 100%.
Bootstrap support for H3AQ52 as seed ortholog is 100%.

Group of orthologs #921. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KA31              	100.00%		H3B6B2              	100.00%
                    	       		H3BAK0              	30.07%
Bootstrap support for Q5KA31 as seed ortholog is 100%.
Bootstrap support for H3B6B2 as seed ortholog is 100%.

Group of orthologs #922. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:129

Q5KHU8              	100.00%		H3BEG2              	100.00%
                    	       		H3AUM2              	60.90%
Bootstrap support for Q5KHU8 as seed ortholog is 100%.
Bootstrap support for H3BEG2 as seed ortholog is 99%.

Group of orthologs #923. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KIY7              	100.00%		H3A1A8              	100.00%
Bootstrap support for Q5KIY7 as seed ortholog is 100%.
Bootstrap support for H3A1A8 as seed ortholog is 100%.

Group of orthologs #924. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:42

P0CO42              	100.00%		M3XK55              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 100%.
Bootstrap support for M3XK55 as seed ortholog is 94%.

Group of orthologs #925. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KPS5              	100.00%		H3B7W6              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for H3B7W6 as seed ortholog is 100%.

Group of orthologs #926. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KPW7              	100.00%		H3B9U7              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for H3B9U7 as seed ortholog is 100%.

Group of orthologs #927. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KND0              	100.00%		H3BBK5              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for H3BBK5 as seed ortholog is 100%.

Group of orthologs #928. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 L.chalumnae:228

Q5KNG3              	100.00%		M3XGW8              	100.00%
Bootstrap support for Q5KNG3 as seed ortholog is 100%.
Bootstrap support for M3XGW8 as seed ortholog is 100%.

Group of orthologs #929. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 L.chalumnae:227

Q5KN72              	100.00%		H3BFX5              	100.00%
                    	       		H3A328              	32.12%
                    	       		H3B527              	24.67%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for H3BFX5 as seed ortholog is 100%.

Group of orthologs #930. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 L.chalumnae:227

Q5KGW3              	100.00%		H3A8M1              	100.00%
Q5KER8              	10.82%		
Bootstrap support for Q5KGW3 as seed ortholog is 100%.
Bootstrap support for H3A8M1 as seed ortholog is 100%.

Group of orthologs #931. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 L.chalumnae:227

Q5K7M8              	100.00%		H3AUP8              	100.00%
Bootstrap support for Q5K7M8 as seed ortholog is 100%.
Bootstrap support for H3AUP8 as seed ortholog is 100%.

Group of orthologs #932. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 L.chalumnae:227

Q5KNW3              	100.00%		H3AVP2              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 100%.
Bootstrap support for H3AVP2 as seed ortholog is 100%.

Group of orthologs #933. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 L.chalumnae:183

Q5K7Y4              	100.00%		H3BE64              	100.00%
Bootstrap support for Q5K7Y4 as seed ortholog is 100%.
Bootstrap support for H3BE64 as seed ortholog is 99%.

Group of orthologs #934. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:227

Q5KHX7              	100.00%		H3B7X9              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 99%.
Bootstrap support for H3B7X9 as seed ortholog is 100%.

Group of orthologs #935. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:139

Q5KBK7              	100.00%		H3A858              	100.00%
                    	       		H3AGI3              	90.09%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for H3A858 as seed ortholog is 100%.

Group of orthologs #936. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 L.chalumnae:226

Q5KIJ0              	100.00%		H3AN65              	100.00%
                    	       		H3BBR9              	9.46%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for H3AN65 as seed ortholog is 100%.

Group of orthologs #937. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 L.chalumnae:226

Q5KI18              	100.00%		H3APK5              	100.00%
Bootstrap support for Q5KI18 as seed ortholog is 100%.
Bootstrap support for H3APK5 as seed ortholog is 100%.

Group of orthologs #938. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 L.chalumnae:226

Q5KIG6              	100.00%		H3AXA9              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for H3AXA9 as seed ortholog is 100%.

Group of orthologs #939. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 L.chalumnae:226

Q5KDI6              	100.00%		M3XGI7              	100.00%
Bootstrap support for Q5KDI6 as seed ortholog is 100%.
Bootstrap support for M3XGI7 as seed ortholog is 100%.

Group of orthologs #940. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 L.chalumnae:225

Q5KMB8              	100.00%		H3AL96              	100.00%
                    	       		H3AEV3              	47.57%
                    	       		H3B623              	23.73%
Bootstrap support for Q5KMB8 as seed ortholog is 100%.
Bootstrap support for H3AL96 as seed ortholog is 100%.

Group of orthologs #941. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 L.chalumnae:225

Q5K7J8              	100.00%		M3XK62              	100.00%
                    	       		M3XGI1              	74.24%
                    	       		H3BCU2              	25.55%
Bootstrap support for Q5K7J8 as seed ortholog is 100%.
Bootstrap support for M3XK62 as seed ortholog is 100%.

Group of orthologs #942. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:16

Q5KN75              	100.00%		H3B5K1              	100.00%
                    	       		H3AJV5              	69.33%
                    	       		M3XKY0              	28.89%
Bootstrap support for Q5KN75 as seed ortholog is 99%.
Bootstrap support for H3B5K1 as seed ortholog is 70%.
Alternative seed ortholog is H3AXL0 (16 bits away from this cluster)

Group of orthologs #943. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 L.chalumnae:225

Q5KQ44              	100.00%		H3ACU8              	100.00%
Q5KPV8              	45.28%		
Bootstrap support for Q5KQ44 as seed ortholog is 100%.
Bootstrap support for H3ACU8 as seed ortholog is 100%.

Group of orthologs #944. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 L.chalumnae:225

Q5KAQ3              	100.00%		H3AY18              	100.00%
                    	       		H3AN39              	53.21%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for H3AY18 as seed ortholog is 100%.

Group of orthologs #945. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:225

P0CQ02              	100.00%		H3AZE6              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 99%.
Bootstrap support for H3AZE6 as seed ortholog is 100%.

Group of orthologs #946. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 L.chalumnae:224

Q5KP27              	100.00%		H3AMD1              	100.00%
                    	       		H3B8W2              	30.50%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for H3AMD1 as seed ortholog is 100%.

Group of orthologs #947. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 L.chalumnae:82

Q5KKY7              	100.00%		H3ASY3              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for H3ASY3 as seed ortholog is 91%.

Group of orthologs #948. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 L.chalumnae:224

Q5KLE3              	100.00%		H3BGK2              	100.00%
Bootstrap support for Q5KLE3 as seed ortholog is 100%.
Bootstrap support for H3BGK2 as seed ortholog is 100%.

Group of orthologs #949. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 L.chalumnae:223

Q5KGJ7              	100.00%		H3B692              	100.00%
Bootstrap support for Q5KGJ7 as seed ortholog is 100%.
Bootstrap support for H3B692 as seed ortholog is 100%.

Group of orthologs #950. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:47

Q5KCR3              	100.00%		H3A120              	100.00%
                    	       		H3BBE6              	30.43%
Bootstrap support for Q5KCR3 as seed ortholog is 100%.
Bootstrap support for H3A120 as seed ortholog is 98%.

Group of orthologs #951. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:10

Q5KNS1              	100.00%		H3BC45              	100.00%
                    	       		H3AIR0              	61.64%
Bootstrap support for Q5KNS1 as seed ortholog is 100%.
Bootstrap support for H3BC45 as seed ortholog is 47%.
Alternative seed ortholog is H3B8J7 (10 bits away from this cluster)

Group of orthologs #952. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:39 L.chalumnae:150

Q5K938              	100.00%		H3A3X0              	100.00%
Bootstrap support for Q5K938 as seed ortholog is 98%.
Bootstrap support for H3A3X0 as seed ortholog is 100%.

Group of orthologs #953. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:222

Q5K7Y2              	100.00%		H3AAA4              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for H3AAA4 as seed ortholog is 100%.

Group of orthologs #954. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:222

Q5KG94              	100.00%		H3AEZ0              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for H3AEZ0 as seed ortholog is 100%.

Group of orthologs #955. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:222

Q5KM03              	100.00%		H3AI49              	100.00%
Bootstrap support for Q5KM03 as seed ortholog is 100%.
Bootstrap support for H3AI49 as seed ortholog is 100%.

Group of orthologs #956. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:222

Q5KIU7              	100.00%		H3AND2              	100.00%
Bootstrap support for Q5KIU7 as seed ortholog is 100%.
Bootstrap support for H3AND2 as seed ortholog is 100%.

Group of orthologs #957. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 L.chalumnae:222

Q5KDD6              	100.00%		H3B751              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for H3B751 as seed ortholog is 100%.

Group of orthologs #958. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:221

Q5K959              	100.00%		H3A5R1              	100.00%
                    	       		H3ADD1              	91.67%
Bootstrap support for Q5K959 as seed ortholog is 100%.
Bootstrap support for H3A5R1 as seed ortholog is 100%.

Group of orthologs #959. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 L.chalumnae:221

Q5K9T5              	100.00%		H3AJT1              	100.00%
                    	       		H3BD74              	29.00%
Bootstrap support for Q5K9T5 as seed ortholog is 100%.
Bootstrap support for H3AJT1 as seed ortholog is 100%.

Group of orthologs #960. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 L.chalumnae:100

Q5KLR5              	100.00%		H3AZ67              	100.00%
Q5K808              	26.12%		
Bootstrap support for Q5KLR5 as seed ortholog is 100%.
Bootstrap support for H3AZ67 as seed ortholog is 98%.

Group of orthologs #961. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 L.chalumnae:221

Q5KG36              	100.00%		H3AAV8              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for H3AAV8 as seed ortholog is 100%.

Group of orthologs #962. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 L.chalumnae:221

Q5KNH3              	100.00%		H3ANL2              	100.00%
Bootstrap support for Q5KNH3 as seed ortholog is 100%.
Bootstrap support for H3ANL2 as seed ortholog is 100%.

Group of orthologs #963. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 L.chalumnae:63

P0CS28              	100.00%		H3AGJ9              	100.00%
                    	       		H3B996              	40.47%
Bootstrap support for P0CS28 as seed ortholog is 100%.
Bootstrap support for H3AGJ9 as seed ortholog is 95%.

Group of orthologs #964. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 L.chalumnae:81

Q5KI08              	100.00%		H3A723              	100.00%
                    	       		H3A0R8              	43.28%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for H3A723 as seed ortholog is 95%.

Group of orthologs #965. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:69 L.chalumnae:46

P0CP78              	100.00%		H2ZW91              	100.00%
Bootstrap support for P0CP78 as seed ortholog is 99%.
Bootstrap support for H2ZW91 as seed ortholog is 95%.

Group of orthologs #966. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 L.chalumnae:151

Q5KEW3              	100.00%		H3A661              	100.00%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for H3A661 as seed ortholog is 99%.

Group of orthologs #967. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 L.chalumnae:220

Q5KK42              	100.00%		H3ASN9              	100.00%
Bootstrap support for Q5KK42 as seed ortholog is 100%.
Bootstrap support for H3ASN9 as seed ortholog is 100%.

Group of orthologs #968. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 L.chalumnae:220

Q5KFT1              	100.00%		H3B831              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for H3B831 as seed ortholog is 100%.

Group of orthologs #969. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 L.chalumnae:219

Q5KEB3              	100.00%		H2ZYG0              	100.00%
                    	       		H3B406              	9.14%
Bootstrap support for Q5KEB3 as seed ortholog is 100%.
Bootstrap support for H2ZYG0 as seed ortholog is 100%.

Group of orthologs #970. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 L.chalumnae:219

Q5K8I5              	100.00%		H2ZZN5              	100.00%
Bootstrap support for Q5K8I5 as seed ortholog is 100%.
Bootstrap support for H2ZZN5 as seed ortholog is 100%.

Group of orthologs #971. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:137

Q5KDR7              	100.00%		H3A2V5              	100.00%
Bootstrap support for Q5KDR7 as seed ortholog is 99%.
Bootstrap support for H3A2V5 as seed ortholog is 99%.

Group of orthologs #972. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 L.chalumnae:218

Q5KGM0              	100.00%		H3A919              	100.00%
Bootstrap support for Q5KGM0 as seed ortholog is 100%.
Bootstrap support for H3A919 as seed ortholog is 100%.

Group of orthologs #973. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 L.chalumnae:218

Q5K760              	100.00%		H3ATH0              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for H3ATH0 as seed ortholog is 100%.

Group of orthologs #974. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 L.chalumnae:218

Q5K7R1              	100.00%		H3AVV6              	100.00%
Bootstrap support for Q5K7R1 as seed ortholog is 100%.
Bootstrap support for H3AVV6 as seed ortholog is 100%.

Group of orthologs #975. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 L.chalumnae:218

Q5KDF6              	100.00%		H3AWI5              	100.00%
Bootstrap support for Q5KDF6 as seed ortholog is 100%.
Bootstrap support for H3AWI5 as seed ortholog is 100%.

Group of orthologs #976. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 L.chalumnae:218

Q5KJJ9              	100.00%		H3AWT4              	100.00%
Bootstrap support for Q5KJJ9 as seed ortholog is 100%.
Bootstrap support for H3AWT4 as seed ortholog is 100%.

Group of orthologs #977. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:217

Q5KKJ8              	100.00%		H3AH67              	100.00%
                    	       		H3A6U3              	33.14%
Bootstrap support for Q5KKJ8 as seed ortholog is 99%.
Bootstrap support for H3AH67 as seed ortholog is 100%.

Group of orthologs #978. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 L.chalumnae:217

Q5KDI9              	100.00%		H3A3Z4              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for H3A3Z4 as seed ortholog is 100%.

Group of orthologs #979. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 L.chalumnae:98

Q5KCK9              	100.00%		H3A801              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for H3A801 as seed ortholog is 99%.

Group of orthologs #980. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 L.chalumnae:217

Q5KDX3              	100.00%		H3ASZ1              	100.00%
Bootstrap support for Q5KDX3 as seed ortholog is 100%.
Bootstrap support for H3ASZ1 as seed ortholog is 100%.

Group of orthologs #981. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 L.chalumnae:217

Q5K8D6              	100.00%		H3BG55              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for H3BG55 as seed ortholog is 100%.

Group of orthologs #982. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 L.chalumnae:216

Q5KCD2              	100.00%		H2ZT38              	100.00%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for H2ZT38 as seed ortholog is 100%.

Group of orthologs #983. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 L.chalumnae:216

Q5KFF7              	100.00%		H3BA19              	100.00%
Bootstrap support for Q5KFF7 as seed ortholog is 100%.
Bootstrap support for H3BA19 as seed ortholog is 100%.

Group of orthologs #984. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 L.chalumnae:215

P0CO06              	100.00%		H3A946              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for H3A946 as seed ortholog is 100%.

Group of orthologs #985. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 L.chalumnae:215

Q5KGU5              	100.00%		H3A401              	100.00%
Bootstrap support for Q5KGU5 as seed ortholog is 100%.
Bootstrap support for H3A401 as seed ortholog is 100%.

Group of orthologs #986. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:215

Q5KNK4              	100.00%		H2ZWZ6              	100.00%
Bootstrap support for Q5KNK4 as seed ortholog is 99%.
Bootstrap support for H2ZWZ6 as seed ortholog is 100%.

Group of orthologs #987. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 L.chalumnae:64

Q5KNI6              	100.00%		H3A2Z0              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for H3A2Z0 as seed ortholog is 99%.

Group of orthologs #988. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:94

P0CP84              	100.00%		H3BF67              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 99%.
Bootstrap support for H3BF67 as seed ortholog is 99%.

Group of orthologs #989. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:215

Q5KFB0              	100.00%		H3BB22              	100.00%
Bootstrap support for Q5KFB0 as seed ortholog is 97%.
Bootstrap support for H3BB22 as seed ortholog is 100%.

Group of orthologs #990. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 L.chalumnae:215

Q5KH61              	100.00%		H3BBK7              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for H3BBK7 as seed ortholog is 100%.

Group of orthologs #991. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 L.chalumnae:68

Q5KDS9              	100.00%		H3APJ2              	100.00%
                    	       		H3A4K3              	37.85%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for H3APJ2 as seed ortholog is 93%.

Group of orthologs #992. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 L.chalumnae:214

Q5KD38              	100.00%		H3BI83              	100.00%
                    	       		H2ZZ94              	28.15%
Bootstrap support for Q5KD38 as seed ortholog is 100%.
Bootstrap support for H3BI83 as seed ortholog is 100%.

Group of orthologs #993. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 L.chalumnae:214

Q5KDJ7              	100.00%		H3AC17              	100.00%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for H3AC17 as seed ortholog is 100%.

Group of orthologs #994. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 L.chalumnae:214

P0CS08              	100.00%		H3ARJ8              	100.00%
Bootstrap support for P0CS08 as seed ortholog is 100%.
Bootstrap support for H3ARJ8 as seed ortholog is 100%.

Group of orthologs #995. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:29

Q5KGS1              	100.00%		H3ASS0              	100.00%
Bootstrap support for Q5KGS1 as seed ortholog is 100%.
Bootstrap support for H3ASS0 as seed ortholog is 89%.

Group of orthologs #996. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 L.chalumnae:214

Q5KMR3              	100.00%		H3B0K1              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for H3B0K1 as seed ortholog is 100%.

Group of orthologs #997. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 L.chalumnae:213

P0CM30              	100.00%		H3BFR9              	100.00%
                    	       		H3BF07              	32.71%
Bootstrap support for P0CM30 as seed ortholog is 100%.
Bootstrap support for H3BFR9 as seed ortholog is 100%.

Group of orthologs #998. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 L.chalumnae:213

Q5KDH9              	100.00%		H3BIM3              	100.00%
                    	       		H3AMX3              	48.11%
Bootstrap support for Q5KDH9 as seed ortholog is 100%.
Bootstrap support for H3BIM3 as seed ortholog is 100%.

Group of orthologs #999. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 L.chalumnae:213

P0CN18              	100.00%		H2ZSG8              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 100%.
Bootstrap support for H2ZSG8 as seed ortholog is 100%.

Group of orthologs #1000. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 L.chalumnae:136

Q5KIL7              	100.00%		H3A1W6              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for H3A1W6 as seed ortholog is 99%.

Group of orthologs #1001. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:75

Q5KGE7              	100.00%		H3AF23              	100.00%
Bootstrap support for Q5KGE7 as seed ortholog is 99%.
Bootstrap support for H3AF23 as seed ortholog is 99%.

Group of orthologs #1002. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 L.chalumnae:121

Q5KMC1              	100.00%		H3AQ76              	100.00%
Bootstrap support for Q5KMC1 as seed ortholog is 100%.
Bootstrap support for H3AQ76 as seed ortholog is 98%.

Group of orthologs #1003. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:112

Q5KGB5              	100.00%		H3B4S3              	100.00%
                    	       		H3A1N6              	81.66%
                    	       		H3B8H0              	34.32%
Bootstrap support for Q5KGB5 as seed ortholog is 99%.
Bootstrap support for H3B4S3 as seed ortholog is 100%.

Group of orthologs #1004. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:111

Q5K717              	100.00%		H3AJB9              	100.00%
                    	       		H3BHJ0              	68.26%
Bootstrap support for Q5K717 as seed ortholog is 92%.
Bootstrap support for H3AJB9 as seed ortholog is 99%.

Group of orthologs #1005. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 L.chalumnae:146

Q5KKT3              	100.00%		H3A9T0              	100.00%
Bootstrap support for Q5KKT3 as seed ortholog is 100%.
Bootstrap support for H3A9T0 as seed ortholog is 99%.

Group of orthologs #1006. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 L.chalumnae:212

Q5KH21              	100.00%		H3AHT8              	100.00%
Bootstrap support for Q5KH21 as seed ortholog is 100%.
Bootstrap support for H3AHT8 as seed ortholog is 100%.

Group of orthologs #1007. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 L.chalumnae:212

Q5KGW0              	100.00%		H3ASH8              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for H3ASH8 as seed ortholog is 100%.

Group of orthologs #1008. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 L.chalumnae:212

Q5KE88              	100.00%		H3B8R7              	100.00%
Bootstrap support for Q5KE88 as seed ortholog is 100%.
Bootstrap support for H3B8R7 as seed ortholog is 100%.

Group of orthologs #1009. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:63

Q5KB48              	100.00%		H3BEC6              	100.00%
Bootstrap support for Q5KB48 as seed ortholog is 99%.
Bootstrap support for H3BEC6 as seed ortholog is 97%.

Group of orthologs #1010. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:53 L.chalumnae:110

Q5KGD8              	100.00%		H2ZW04              	100.00%
                    	       		H3AQP0              	19.35%
                    	       		H2ZY29              	8.88%
Bootstrap support for Q5KGD8 as seed ortholog is 88%.
Bootstrap support for H2ZW04 as seed ortholog is 99%.

Group of orthologs #1011. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 L.chalumnae:211

P0CR74              	100.00%		H3A2U3              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for H3A2U3 as seed ortholog is 100%.

Group of orthologs #1012. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 L.chalumnae:211

Q5KK07              	100.00%		H3A587              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for H3A587 as seed ortholog is 100%.

Group of orthologs #1013. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 L.chalumnae:148

Q5KJ01              	100.00%		H3AHF7              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for H3AHF7 as seed ortholog is 99%.

Group of orthologs #1014. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 L.chalumnae:210

P0CS78              	100.00%		H3A9A6              	100.00%
Bootstrap support for P0CS78 as seed ortholog is 100%.
Bootstrap support for H3A9A6 as seed ortholog is 100%.

Group of orthologs #1015. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 L.chalumnae:210

Q5K9U5              	100.00%		H3APH1              	100.00%
Bootstrap support for Q5K9U5 as seed ortholog is 100%.
Bootstrap support for H3APH1 as seed ortholog is 100%.

Group of orthologs #1016. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 L.chalumnae:210

Q5KBB6              	100.00%		H3AN88              	100.00%
Bootstrap support for Q5KBB6 as seed ortholog is 100%.
Bootstrap support for H3AN88 as seed ortholog is 100%.

Group of orthologs #1017. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:27 L.chalumnae:210

Q5K7Y0              	100.00%		H3ASQ5              	100.00%
Bootstrap support for Q5K7Y0 as seed ortholog is 55%.
Alternative seed ortholog is Q5K918 (27 bits away from this cluster)
Bootstrap support for H3ASQ5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 L.chalumnae:210

P0CQ64              	100.00%		H3AZA0              	100.00%
Bootstrap support for P0CQ64 as seed ortholog is 100%.
Bootstrap support for H3AZA0 as seed ortholog is 100%.

Group of orthologs #1019. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 L.chalumnae:168

Q5KB57              	100.00%		H3B857              	100.00%
Bootstrap support for Q5KB57 as seed ortholog is 100%.
Bootstrap support for H3B857 as seed ortholog is 100%.

Group of orthologs #1020. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 L.chalumnae:210

Q5KPX1              	100.00%		H3BFQ5              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for H3BFQ5 as seed ortholog is 100%.

Group of orthologs #1021. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:141

Q5KNG0              	100.00%		H3AIS8              	100.00%
                    	       		H3A3Z0              	62.07%
                    	       		H3BFX6              	26.01%
Bootstrap support for Q5KNG0 as seed ortholog is 99%.
Bootstrap support for H3AIS8 as seed ortholog is 99%.

Group of orthologs #1022. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 L.chalumnae:209

Q5KGM3              	100.00%		H2ZZT7              	100.00%
Bootstrap support for Q5KGM3 as seed ortholog is 100%.
Bootstrap support for H2ZZT7 as seed ortholog is 100%.

Group of orthologs #1023. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:33 L.chalumnae:33

Q5KL06              	100.00%		H2ZVI3              	100.00%
Bootstrap support for Q5KL06 as seed ortholog is 81%.
Bootstrap support for H2ZVI3 as seed ortholog is 85%.

Group of orthologs #1024. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 L.chalumnae:209

Q5KBQ8              	100.00%		H3B001              	100.00%
Bootstrap support for Q5KBQ8 as seed ortholog is 100%.
Bootstrap support for H3B001 as seed ortholog is 100%.

Group of orthologs #1025. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:131

Q5KBE8              	100.00%		H3B488              	100.00%
Q5KPG2              	58.48%		
Q5KLQ1              	15.23%		
Q5KE59              	11.47%		
Q5K8B7              	8.43%		
Bootstrap support for Q5KBE8 as seed ortholog is 100%.
Bootstrap support for H3B488 as seed ortholog is 99%.

Group of orthologs #1026. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:208

Q5K9V0              	100.00%		H3AAQ6              	100.00%
                    	       		H2ZTZ4              	49.05%
                    	       		H3A9H6              	23.58%
Bootstrap support for Q5K9V0 as seed ortholog is 100%.
Bootstrap support for H3AAQ6 as seed ortholog is 100%.

Group of orthologs #1027. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:73

Q5KEU0              	100.00%		M3XGK5              	100.00%
                    	       		H3B8F7              	75.33%
Bootstrap support for Q5KEU0 as seed ortholog is 100%.
Bootstrap support for M3XGK5 as seed ortholog is 99%.

Group of orthologs #1028. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:208

Q5KAM1              	100.00%		H3A3Y8              	100.00%
Bootstrap support for Q5KAM1 as seed ortholog is 99%.
Bootstrap support for H3A3Y8 as seed ortholog is 100%.

Group of orthologs #1029. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:89 L.chalumnae:85

Q5KKS0              	100.00%		H3A6U6              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 96%.
Bootstrap support for H3A6U6 as seed ortholog is 98%.

Group of orthologs #1030. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:208

Q5K8H7              	100.00%		H3ALJ5              	100.00%
Bootstrap support for Q5K8H7 as seed ortholog is 100%.
Bootstrap support for H3ALJ5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:208

Q5KF34              	100.00%		H3ALH2              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for H3ALH2 as seed ortholog is 100%.

Group of orthologs #1032. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:208

Q5KJJ4              	100.00%		H3AJA8              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for H3AJA8 as seed ortholog is 100%.

Group of orthologs #1033. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:208

P0CM34              	100.00%		H3BA94              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for H3BA94 as seed ortholog is 100%.

Group of orthologs #1034. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 L.chalumnae:208

Q5KKX2              	100.00%		H3BH19              	100.00%
Bootstrap support for Q5KKX2 as seed ortholog is 100%.
Bootstrap support for H3BH19 as seed ortholog is 100%.

Group of orthologs #1035. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 L.chalumnae:207

Q5KH36              	100.00%		H3AS54              	100.00%
                    	       		H3BGL6              	26.42%
                    	       		H3AER0              	9.51%
                    	       		H2ZUH7              	8.64%
                    	       		H3BFB1              	8.64%
                    	       		H3AKK1              	7.78%
                    	       		H3A1E5              	7.53%
                    	       		H3B469              	7.16%
                    	       		H3B3V1              	6.67%
Bootstrap support for Q5KH36 as seed ortholog is 100%.
Bootstrap support for H3AS54 as seed ortholog is 100%.

Group of orthologs #1036. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:123

Q5K756              	100.00%		H3AE65              	100.00%
Q5KM34              	13.28%		H3B461              	100.00%
Bootstrap support for Q5K756 as seed ortholog is 99%.
Bootstrap support for H3AE65 as seed ortholog is 99%.
Bootstrap support for H3B461 as seed ortholog is 99%.

Group of orthologs #1037. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 L.chalumnae:207

Q5KPE9              	100.00%		H3ANG1              	100.00%
                    	       		H3AUP4              	57.21%
Bootstrap support for Q5KPE9 as seed ortholog is 100%.
Bootstrap support for H3ANG1 as seed ortholog is 100%.

Group of orthologs #1038. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 L.chalumnae:207

Q5KB12              	100.00%		H3B9T5              	100.00%
                    	       		H3BD64              	38.45%
Bootstrap support for Q5KB12 as seed ortholog is 100%.
Bootstrap support for H3B9T5 as seed ortholog is 100%.

Group of orthologs #1039. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 L.chalumnae:207

Q5KF90              	100.00%		H3A7W2              	100.00%
Bootstrap support for Q5KF90 as seed ortholog is 100%.
Bootstrap support for H3A7W2 as seed ortholog is 100%.

Group of orthologs #1040. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 L.chalumnae:207

Q5KJJ3              	100.00%		H3AGY0              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for H3AGY0 as seed ortholog is 100%.

Group of orthologs #1041. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 L.chalumnae:207

Q5KJS8              	100.00%		H3B195              	100.00%
Bootstrap support for Q5KJS8 as seed ortholog is 100%.
Bootstrap support for H3B195 as seed ortholog is 100%.

Group of orthologs #1042. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:46

Q5KEY5              	100.00%		H3BHD9              	100.00%
Q5K9E7              	7.82%		H3AQG7              	30.78%
                    	       		H3ANP6              	26.77%
Bootstrap support for Q5KEY5 as seed ortholog is 94%.
Bootstrap support for H3BHD9 as seed ortholog is 80%.

Group of orthologs #1043. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:75

Q5KJG5              	100.00%		H3B7F0              	100.00%
                    	       		H3AN46              	45.95%
Bootstrap support for Q5KJG5 as seed ortholog is 100%.
Bootstrap support for H3B7F0 as seed ortholog is 93%.

Group of orthologs #1044. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:206

Q5KL20              	100.00%		H2ZW53              	100.00%
Bootstrap support for Q5KL20 as seed ortholog is 100%.
Bootstrap support for H2ZW53 as seed ortholog is 100%.

Group of orthologs #1045. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:206

Q5KA78              	100.00%		H3AVE6              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 100%.
Bootstrap support for H3AVE6 as seed ortholog is 100%.

Group of orthologs #1046. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:206

Q5KMB9              	100.00%		H3APJ4              	100.00%
Bootstrap support for Q5KMB9 as seed ortholog is 100%.
Bootstrap support for H3APJ4 as seed ortholog is 100%.

Group of orthologs #1047. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:206

Q5K7I5              	100.00%		H3BIK6              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for H3BIK6 as seed ortholog is 100%.

Group of orthologs #1048. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:206

Q5K6V6              	100.00%		M3XIA9              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for M3XIA9 as seed ortholog is 100%.

Group of orthologs #1049. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 L.chalumnae:206

Q5KIU9              	100.00%		H3BG39              	100.00%
Bootstrap support for Q5KIU9 as seed ortholog is 100%.
Bootstrap support for H3BG39 as seed ortholog is 100%.

Group of orthologs #1050. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:205

Q5K6X5              	100.00%		H3AB75              	100.00%
                    	       		H3AE82              	35.64%
                    	       		M3XI70              	28.89%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for H3AB75 as seed ortholog is 100%.

Group of orthologs #1051. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:205

Q5KF27              	100.00%		H3AWH0              	100.00%
                    	       		H3AIU2              	58.74%
Bootstrap support for Q5KF27 as seed ortholog is 100%.
Bootstrap support for H3AWH0 as seed ortholog is 100%.

Group of orthologs #1052. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:205

Q5KCU5              	100.00%		H2ZUE9              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for H2ZUE9 as seed ortholog is 100%.

Group of orthologs #1053. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:156

Q5KIG4              	100.00%		H3AGA7              	100.00%
Bootstrap support for Q5KIG4 as seed ortholog is 100%.
Bootstrap support for H3AGA7 as seed ortholog is 100%.

Group of orthologs #1054. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:205

Q5KFR3              	100.00%		H3ANL4              	100.00%
Bootstrap support for Q5KFR3 as seed ortholog is 100%.
Bootstrap support for H3ANL4 as seed ortholog is 100%.

Group of orthologs #1055. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:205

Q5KC13              	100.00%		H3ASP7              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for H3ASP7 as seed ortholog is 100%.

Group of orthologs #1056. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:205

Q5K8L0              	100.00%		H3AZV5              	100.00%
Bootstrap support for Q5K8L0 as seed ortholog is 99%.
Bootstrap support for H3AZV5 as seed ortholog is 100%.

Group of orthologs #1057. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 L.chalumnae:205

Q5KHT0              	100.00%		H3AZS2              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for H3AZS2 as seed ortholog is 100%.

Group of orthologs #1058. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:69

Q5KDH2              	100.00%		H3BAR5              	100.00%
Bootstrap support for Q5KDH2 as seed ortholog is 99%.
Bootstrap support for H3BAR5 as seed ortholog is 97%.

Group of orthologs #1059. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

Q5K8I4              	100.00%		H2ZX23              	100.00%
Bootstrap support for Q5K8I4 as seed ortholog is 100%.
Bootstrap support for H2ZX23 as seed ortholog is 100%.

Group of orthologs #1060. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

Q5KC10              	100.00%		H2ZZA9              	100.00%
Bootstrap support for Q5KC10 as seed ortholog is 100%.
Bootstrap support for H2ZZA9 as seed ortholog is 100%.

Group of orthologs #1061. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

Q5KGQ0              	100.00%		H2ZUN6              	100.00%
Bootstrap support for Q5KGQ0 as seed ortholog is 100%.
Bootstrap support for H2ZUN6 as seed ortholog is 100%.

Group of orthologs #1062. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:33 L.chalumnae:204

Q5KK15              	100.00%		H3A1U3              	100.00%
Bootstrap support for Q5KK15 as seed ortholog is 79%.
Bootstrap support for H3A1U3 as seed ortholog is 100%.

Group of orthologs #1063. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

Q5KQ87              	100.00%		H2ZY81              	100.00%
Bootstrap support for Q5KQ87 as seed ortholog is 100%.
Bootstrap support for H2ZY81 as seed ortholog is 100%.

Group of orthologs #1064. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

Q5K7E0              	100.00%		H3AXH8              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for H3AXH8 as seed ortholog is 100%.

Group of orthologs #1065. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

Q5KDB3              	100.00%		H3AU57              	100.00%
Bootstrap support for Q5KDB3 as seed ortholog is 100%.
Bootstrap support for H3AU57 as seed ortholog is 100%.

Group of orthologs #1066. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 L.chalumnae:204

P0CN64              	100.00%		H3B323              	100.00%
Bootstrap support for P0CN64 as seed ortholog is 100%.
Bootstrap support for H3B323 as seed ortholog is 100%.

Group of orthologs #1067. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:45

Q5K7V1              	100.00%		H3AAT1              	100.00%
                    	       		H3ANM8              	52.02%
                    	       		H3BI60              	52.02%
                    	       		H3A6H8              	44.84%
Bootstrap support for Q5K7V1 as seed ortholog is 92%.
Bootstrap support for H3AAT1 as seed ortholog is 90%.

Group of orthologs #1068. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 L.chalumnae:203

Q5KLQ4              	100.00%		H3AI08              	21.79%
Q5KLR2              	100.00%		H3BA10              	100.00%
                    	       		H3AG72              	15.37%
Bootstrap support for Q5KLQ4 as seed ortholog is 100%.
Bootstrap support for Q5KLR2 as seed ortholog is 100%.
Bootstrap support for H3BA10 as seed ortholog is 100%.

Group of orthologs #1069. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 L.chalumnae:203

Q5KCL9              	100.00%		H3ADA6              	100.00%
Bootstrap support for Q5KCL9 as seed ortholog is 100%.
Bootstrap support for H3ADA6 as seed ortholog is 100%.

Group of orthologs #1070. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 L.chalumnae:203

Q5KJ40              	100.00%		H3A7U5              	100.00%
Bootstrap support for Q5KJ40 as seed ortholog is 100%.
Bootstrap support for H3A7U5 as seed ortholog is 100%.

Group of orthologs #1071. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:203

Q5KAB6              	100.00%		H3BCH7              	100.00%
Bootstrap support for Q5KAB6 as seed ortholog is 99%.
Bootstrap support for H3BCH7 as seed ortholog is 100%.

Group of orthologs #1072. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 L.chalumnae:202

Q5KB37              	100.00%		H3B5N5              	100.00%
                    	       		H3ASG0              	55.48%
Bootstrap support for Q5KB37 as seed ortholog is 100%.
Bootstrap support for H3B5N5 as seed ortholog is 100%.

Group of orthologs #1073. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 L.chalumnae:3

Q5KP19              	100.00%		H3B4Q3              	100.00%
Bootstrap support for Q5KP19 as seed ortholog is 100%.
Bootstrap support for H3B4Q3 as seed ortholog is 53%.
Alternative seed ortholog is H3A2U8 (3 bits away from this cluster)

Group of orthologs #1074. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 L.chalumnae:202

Q5KKV3              	100.00%		H3BBU9              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for H3BBU9 as seed ortholog is 100%.

Group of orthologs #1075. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 L.chalumnae:202

Q5KM60              	100.00%		H3BIS6              	100.00%
Bootstrap support for Q5KM60 as seed ortholog is 100%.
Bootstrap support for H3BIS6 as seed ortholog is 100%.

Group of orthologs #1076. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:48 L.chalumnae:201

Q5KK08              	100.00%		H3A3S4              	100.00%
Q5KBZ2              	35.54%		H3B5G2              	9.94%
                    	       		H3B626              	7.89%
Bootstrap support for Q5KK08 as seed ortholog is 84%.
Bootstrap support for H3A3S4 as seed ortholog is 100%.

Group of orthologs #1077. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:201

Q5KJD1              	100.00%		H3B907              	100.00%
                    	       		H3AH13              	51.75%
                    	       		H2ZUG3              	26.78%
Bootstrap support for Q5KJD1 as seed ortholog is 96%.
Bootstrap support for H3B907 as seed ortholog is 100%.

Group of orthologs #1078. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:201

Q5KBW6              	100.00%		H3AGN4              	100.00%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for H3AGN4 as seed ortholog is 100%.

Group of orthologs #1079. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:201

Q5KIE0              	100.00%		H3AD22              	100.00%
Bootstrap support for Q5KIE0 as seed ortholog is 100%.
Bootstrap support for H3AD22 as seed ortholog is 100%.

Group of orthologs #1080. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:201

Q5K850              	100.00%		H3B105              	100.00%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for H3B105 as seed ortholog is 100%.

Group of orthologs #1081. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:201

Q5K9Z8              	100.00%		H3B890              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 100%.
Bootstrap support for H3B890 as seed ortholog is 100%.

Group of orthologs #1082. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:201

Q5KBW8              	100.00%		H3BAF0              	100.00%
Bootstrap support for Q5KBW8 as seed ortholog is 100%.
Bootstrap support for H3BAF0 as seed ortholog is 100%.

Group of orthologs #1083. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 L.chalumnae:201

Q5KF23              	100.00%		H3BIA2              	100.00%
Bootstrap support for Q5KF23 as seed ortholog is 100%.
Bootstrap support for H3BIA2 as seed ortholog is 100%.

Group of orthologs #1084. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:79

Q5KLA9              	100.00%		H2ZVP0              	100.00%
                    	       		H2ZYC3              	44.65%
                    	       		H3AH64              	29.05%
Bootstrap support for Q5KLA9 as seed ortholog is 100%.
Bootstrap support for H2ZVP0 as seed ortholog is 95%.

Group of orthologs #1085. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:200

Q5KD00              	100.00%		H3AGE7              	100.00%
                    	       		H3AS50              	51.46%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for H3AGE7 as seed ortholog is 100%.

Group of orthologs #1086. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:116

Q5KHY4              	100.00%		H3BAR8              	100.00%
                    	       		H3B349              	11.95%
Bootstrap support for Q5KHY4 as seed ortholog is 100%.
Bootstrap support for H3BAR8 as seed ortholog is 99%.

Group of orthologs #1087. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:200

Q5K8F4              	100.00%		M3XKQ9              	100.00%
                    	       		M3XHS0              	7.68%
Bootstrap support for Q5K8F4 as seed ortholog is 100%.
Bootstrap support for M3XKQ9 as seed ortholog is 100%.

Group of orthologs #1088. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:126

P0CS30              	100.00%		H3A0W8              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 100%.
Bootstrap support for H3A0W8 as seed ortholog is 99%.

Group of orthologs #1089. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:200

Q5K8H5              	100.00%		H3A5H1              	100.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for H3A5H1 as seed ortholog is 100%.

Group of orthologs #1090. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:200

Q5KCQ4              	100.00%		H3A7U7              	100.00%
Bootstrap support for Q5KCQ4 as seed ortholog is 100%.
Bootstrap support for H3A7U7 as seed ortholog is 100%.

Group of orthologs #1091. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:200

Q5KNA5              	100.00%		H3AQY0              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for H3AQY0 as seed ortholog is 100%.

Group of orthologs #1092. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:25

Q5KGE3              	100.00%		H3B8D6              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for H3B8D6 as seed ortholog is 82%.

Group of orthologs #1093. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 L.chalumnae:200

Q5KEQ0              	100.00%		H3BIS7              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for H3BIS7 as seed ortholog is 100%.

Group of orthologs #1094. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 L.chalumnae:199

Q5KI79              	100.00%		H3A0Z9              	100.00%
                    	       		H3AET0              	65.44%
Bootstrap support for Q5KI79 as seed ortholog is 100%.
Bootstrap support for H3A0Z9 as seed ortholog is 100%.

Group of orthologs #1095. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 L.chalumnae:199

Q5KDK4              	100.00%		H2ZV22              	100.00%
Bootstrap support for Q5KDK4 as seed ortholog is 100%.
Bootstrap support for H2ZV22 as seed ortholog is 100%.

Group of orthologs #1096. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:38 L.chalumnae:199

P0CM46              	100.00%		H3AQ54              	100.00%
Bootstrap support for P0CM46 as seed ortholog is 76%.
Bootstrap support for H3AQ54 as seed ortholog is 100%.

Group of orthologs #1097. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 L.chalumnae:157

Q5KP95              	100.00%		H3A6G6              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for H3A6G6 as seed ortholog is 100%.

Group of orthologs #1098. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:36 L.chalumnae:77

Q5K7E1              	100.00%		H3BAL3              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 61%.
Alternative seed ortholog is Q5KP46 (36 bits away from this cluster)
Bootstrap support for H3BAL3 as seed ortholog is 91%.

Group of orthologs #1099. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 L.chalumnae:18

Q5KM42              	100.00%		H3B2T7              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 100%.
Bootstrap support for H3B2T7 as seed ortholog is 74%.
Alternative seed ortholog is H2ZV98 (18 bits away from this cluster)

Group of orthologs #1100. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:82 L.chalumnae:198

Q5KJW9              	100.00%		H3B9U4              	100.00%
                    	       		H3AEI9              	35.49%
                    	       		H3ABR7              	13.89%
                    	       		H3BDG0              	7.25%
Bootstrap support for Q5KJW9 as seed ortholog is 99%.
Bootstrap support for H3B9U4 as seed ortholog is 100%.

Group of orthologs #1101. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 L.chalumnae:198

Q5KJZ6              	100.00%		H3B9Y3              	100.00%
                    	       		H3A7N4              	76.91%
                    	       		H3AEC0              	74.18%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for H3B9Y3 as seed ortholog is 100%.

Group of orthologs #1102. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 L.chalumnae:198

Q5KN33              	100.00%		H3B8G8              	100.00%
                    	       		H3ANQ2              	64.25%
                    	       		H3AZ81              	26.17%
Bootstrap support for Q5KN33 as seed ortholog is 100%.
Bootstrap support for H3B8G8 as seed ortholog is 100%.

Group of orthologs #1103. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 L.chalumnae:198

Q5K777              	100.00%		H3BGZ8              	100.00%
                    	       		H3B8J2              	31.36%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for H3BGZ8 as seed ortholog is 100%.

Group of orthologs #1104. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 L.chalumnae:198

Q5KB01              	100.00%		H2ZXN9              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for H2ZXN9 as seed ortholog is 100%.

Group of orthologs #1105. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:198

Q5K9G2              	100.00%		H3ASI1              	100.00%
Bootstrap support for Q5K9G2 as seed ortholog is 99%.
Bootstrap support for H3ASI1 as seed ortholog is 100%.

Group of orthologs #1106. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 L.chalumnae:78

Q5K720              	100.00%		H3AWP7              	100.00%
Bootstrap support for Q5K720 as seed ortholog is 100%.
Bootstrap support for H3AWP7 as seed ortholog is 99%.

Group of orthologs #1107. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:127

Q5KLT0              	100.00%		H3AL24              	100.00%
Bootstrap support for Q5KLT0 as seed ortholog is 99%.
Bootstrap support for H3AL24 as seed ortholog is 99%.

Group of orthologs #1108. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 L.chalumnae:198

Q5KD06              	100.00%		H3BDH5              	100.00%
Bootstrap support for Q5KD06 as seed ortholog is 100%.
Bootstrap support for H3BDH5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:148

P0CP14              	100.00%		H3AUE0              	100.00%
                    	       		H3BBE2              	53.77%
Bootstrap support for P0CP14 as seed ortholog is 97%.
Bootstrap support for H3AUE0 as seed ortholog is 99%.

Group of orthologs #1110. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 L.chalumnae:197

Q5KJJ7              	100.00%		H3B0N4              	100.00%
                    	       		H3AR95              	38.06%
Bootstrap support for Q5KJJ7 as seed ortholog is 100%.
Bootstrap support for H3B0N4 as seed ortholog is 100%.

Group of orthologs #1111. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 L.chalumnae:197

Q5KIZ8              	100.00%		H3AEW1              	100.00%
Bootstrap support for Q5KIZ8 as seed ortholog is 100%.
Bootstrap support for H3AEW1 as seed ortholog is 100%.

Group of orthologs #1112. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 L.chalumnae:197

Q5KB25              	100.00%		H3BGA2              	100.00%
Bootstrap support for Q5KB25 as seed ortholog is 100%.
Bootstrap support for H3BGA2 as seed ortholog is 100%.

Group of orthologs #1113. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 L.chalumnae:196

Q5KE33              	100.00%		H3BFV2              	100.00%
                    	       		H3B584              	23.08%
Bootstrap support for Q5KE33 as seed ortholog is 100%.
Bootstrap support for H3BFV2 as seed ortholog is 100%.

Group of orthologs #1114. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 L.chalumnae:196

Q5KFP2              	100.00%		H2ZSF2              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 100%.
Bootstrap support for H2ZSF2 as seed ortholog is 100%.

Group of orthologs #1115. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 L.chalumnae:196

P0CO86              	100.00%		H3B4K2              	100.00%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for H3B4K2 as seed ortholog is 100%.

Group of orthologs #1116. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 L.chalumnae:196

Q5KIE6              	100.00%		H3ATS7              	100.00%
Bootstrap support for Q5KIE6 as seed ortholog is 100%.
Bootstrap support for H3ATS7 as seed ortholog is 100%.

Group of orthologs #1117. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 L.chalumnae:196

Q5KAJ9              	100.00%		H3B9E2              	100.00%
Bootstrap support for Q5KAJ9 as seed ortholog is 100%.
Bootstrap support for H3B9E2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 L.chalumnae:64

Q5KG73              	100.00%		H3BEI3              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 100%.
Bootstrap support for H3BEI3 as seed ortholog is 90%.

Group of orthologs #1119. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:91

Q5KIX3              	100.00%		H3BHU5              	100.00%
Bootstrap support for Q5KIX3 as seed ortholog is 89%.
Bootstrap support for H3BHU5 as seed ortholog is 98%.

Group of orthologs #1120. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 L.chalumnae:195

Q5KG31              	100.00%		H3ACP6              	100.00%
                    	       		M3XI37              	21.10%
                    	       		H3AXM3              	10.72%
Bootstrap support for Q5KG31 as seed ortholog is 100%.
Bootstrap support for H3ACP6 as seed ortholog is 100%.

Group of orthologs #1121. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 L.chalumnae:195

Q5KAB2              	100.00%		H3AY17              	100.00%
                    	       		H2ZZB1              	54.27%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for H3AY17 as seed ortholog is 100%.

Group of orthologs #1122. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 L.chalumnae:195

Q5KIW9              	100.00%		H2ZUI0              	100.00%
Bootstrap support for Q5KIW9 as seed ortholog is 100%.
Bootstrap support for H2ZUI0 as seed ortholog is 100%.

Group of orthologs #1123. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 L.chalumnae:195

Q5K6Z0              	100.00%		H3AK52              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for H3AK52 as seed ortholog is 100%.

Group of orthologs #1124. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 L.chalumnae:34

Q5KFV8              	100.00%		H3API9              	100.00%
Bootstrap support for Q5KFV8 as seed ortholog is 100%.
Bootstrap support for H3API9 as seed ortholog is 90%.

Group of orthologs #1125. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 L.chalumnae:195

Q5KAJ6              	100.00%		H3B7D2              	100.00%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for H3B7D2 as seed ortholog is 100%.

Group of orthologs #1126. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 L.chalumnae:194

P0CN60              	100.00%		H3ARB5              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for H3ARB5 as seed ortholog is 100%.

Group of orthologs #1127. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 L.chalumnae:194

Q5KHA1              	100.00%		H3AJT2              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for H3AJT2 as seed ortholog is 100%.

Group of orthologs #1128. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 L.chalumnae:148

Q5KKF8              	100.00%		H3AYS0              	100.00%
Bootstrap support for Q5KKF8 as seed ortholog is 100%.
Bootstrap support for H3AYS0 as seed ortholog is 100%.

Group of orthologs #1129. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 L.chalumnae:194

Q5KKJ2              	100.00%		H3B2S1              	100.00%
Bootstrap support for Q5KKJ2 as seed ortholog is 100%.
Bootstrap support for H3B2S1 as seed ortholog is 100%.

Group of orthologs #1130. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 L.chalumnae:194

Q5KMU2              	100.00%		H3BG48              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for H3BG48 as seed ortholog is 100%.

Group of orthologs #1131. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KDT2              	100.00%		H3BB35              	100.00%
                    	       		H3A3H6              	56.35%
                    	       		H3B2J2              	51.35%
                    	       		H3B4A7              	17.30%
                    	       		H3B7M7              	10.54%
Bootstrap support for Q5KDT2 as seed ortholog is 100%.
Bootstrap support for H3BB35 as seed ortholog is 100%.

Group of orthologs #1132. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KBT5              	100.00%		H3AZT4              	100.00%
                    	       		H3BCQ6              	81.01%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for H3AZT4 as seed ortholog is 100%.

Group of orthologs #1133. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:80 L.chalumnae:39

Q5KJ96              	100.00%		H3AX47              	100.00%
                    	       		H3B3C5              	48.72%
Bootstrap support for Q5KJ96 as seed ortholog is 99%.
Bootstrap support for H3AX47 as seed ortholog is 84%.

Group of orthologs #1134. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KNH2              	100.00%		H2ZXK8              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for H2ZXK8 as seed ortholog is 100%.

Group of orthologs #1135. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KEZ9              	100.00%		H3AAJ1              	100.00%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for H3AAJ1 as seed ortholog is 100%.

Group of orthologs #1136. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:131

Q5KIB2              	100.00%		H3AL25              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for H3AL25 as seed ortholog is 99%.

Group of orthologs #1137. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KMZ6              	100.00%		H3AMG3              	100.00%
Bootstrap support for Q5KMZ6 as seed ortholog is 100%.
Bootstrap support for H3AMG3 as seed ortholog is 100%.

Group of orthologs #1138. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:72

Q5KE34              	100.00%		H3B740              	100.00%
Bootstrap support for Q5KE34 as seed ortholog is 100%.
Bootstrap support for H3B740 as seed ortholog is 95%.

Group of orthologs #1139. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KAI5              	100.00%		H3BFT6              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for H3BFT6 as seed ortholog is 100%.

Group of orthologs #1140. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 L.chalumnae:193

Q5KMA0              	100.00%		H3BAG8              	100.00%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for H3BAG8 as seed ortholog is 100%.

Group of orthologs #1141. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:41

P0CN98              	100.00%		H3B8N0              	100.00%
                    	       		H3BE02              	56.52%
                    	       		H3A6T6              	43.48%
                    	       		H3A0A2              	31.88%
Bootstrap support for P0CN98 as seed ortholog is 100%.
Bootstrap support for H3B8N0 as seed ortholog is 99%.

Group of orthologs #1142. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:192

Q5KJ21              	100.00%		M3XHU7              	100.00%
Q5K7P5              	32.13%		H3AYY5              	46.58%
Q5KHG5              	30.28%		
Bootstrap support for Q5KJ21 as seed ortholog is 98%.
Bootstrap support for M3XHU7 as seed ortholog is 100%.

Group of orthologs #1143. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KCU1              	100.00%		H3AFJ5              	100.00%
Bootstrap support for Q5KCU1 as seed ortholog is 100%.
Bootstrap support for H3AFJ5 as seed ortholog is 100%.

Group of orthologs #1144. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KLH8              	100.00%		H3AEZ7              	100.00%
Bootstrap support for Q5KLH8 as seed ortholog is 100%.
Bootstrap support for H3AEZ7 as seed ortholog is 100%.

Group of orthologs #1145. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KKX5              	100.00%		H3AFY8              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for H3AFY8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KH86              	100.00%		H3ALE6              	100.00%
Bootstrap support for Q5KH86 as seed ortholog is 100%.
Bootstrap support for H3ALE6 as seed ortholog is 100%.

Group of orthologs #1147. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KQ88              	100.00%		H3AL71              	100.00%
Bootstrap support for Q5KQ88 as seed ortholog is 100%.
Bootstrap support for H3AL71 as seed ortholog is 100%.

Group of orthologs #1148. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:15 L.chalumnae:103

Q5KDF7              	100.00%		H3B0X0              	100.00%
Bootstrap support for Q5KDF7 as seed ortholog is 73%.
Alternative seed ortholog is Q5KN20 (15 bits away from this cluster)
Bootstrap support for H3B0X0 as seed ortholog is 99%.

Group of orthologs #1149. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KIZ3              	100.00%		H3B542              	100.00%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for H3B542 as seed ortholog is 100%.

Group of orthologs #1150. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 L.chalumnae:192

Q5KP79              	100.00%		H3BIF8              	100.00%
Bootstrap support for Q5KP79 as seed ortholog is 100%.
Bootstrap support for H3BIF8 as seed ortholog is 100%.

Group of orthologs #1151. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:123

Q5KJE5              	100.00%		H3B8D7              	100.00%
                    	       		H3AIA9              	47.91%
                    	       		H3AXP1              	9.16%
Bootstrap support for Q5KJE5 as seed ortholog is 100%.
Bootstrap support for H3B8D7 as seed ortholog is 99%.

Group of orthologs #1152. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:28 L.chalumnae:47

Q5KGR6              	100.00%		H3AA08              	100.00%
                    	       		H3BEM9              	7.45%
Bootstrap support for Q5KGR6 as seed ortholog is 92%.
Bootstrap support for H3AA08 as seed ortholog is 99%.

Group of orthologs #1153. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:191

Q5KGM8              	100.00%		H3AEH4              	100.00%
                    	       		H2ZWF4              	73.87%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for H3AEH4 as seed ortholog is 100%.

Group of orthologs #1154. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:191

Q5KAZ2              	100.00%		H3BAH1              	100.00%
                    	       		H3B393              	25.62%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for H3BAH1 as seed ortholog is 100%.

Group of orthologs #1155. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:79 L.chalumnae:121

Q5KGC9              	100.00%		H3BAB0              	100.00%
                    	       		H3BHN8              	60.27%
Bootstrap support for Q5KGC9 as seed ortholog is 90%.
Bootstrap support for H3BAB0 as seed ortholog is 99%.

Group of orthologs #1156. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:191

Q5KGZ7              	100.00%		H3ALY0              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for H3ALY0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:119 L.chalumnae:112

Q5KM53              	100.00%		H3AJ63              	100.00%
Bootstrap support for Q5KM53 as seed ortholog is 99%.
Bootstrap support for H3AJ63 as seed ortholog is 99%.

Group of orthologs #1158. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:191

Q5KH26              	100.00%		H3B5P7              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for H3B5P7 as seed ortholog is 100%.

Group of orthologs #1159. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 L.chalumnae:191

Q5KBY9              	100.00%		H3BB85              	100.00%
Bootstrap support for Q5KBY9 as seed ortholog is 100%.
Bootstrap support for H3BB85 as seed ortholog is 100%.

Group of orthologs #1160. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 L.chalumnae:73

Q5KA58              	100.00%		H3AMU1              	100.00%
                    	       		H3A9I2              	66.24%
                    	       		H3AQY1              	63.95%
                    	       		H3A409              	49.93%
                    	       		H3A410              	8.15%
                    	       		H3B637              	5.66%
Bootstrap support for Q5KA58 as seed ortholog is 100%.
Bootstrap support for H3AMU1 as seed ortholog is 92%.

Group of orthologs #1161. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 L.chalumnae:190

Q5KAA5              	100.00%		H3AIM4              	100.00%
                    	       		H3BH54              	9.38%
Bootstrap support for Q5KAA5 as seed ortholog is 100%.
Bootstrap support for H3AIM4 as seed ortholog is 100%.

Group of orthologs #1162. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:88

Q5KFG5              	100.00%		H3ARP2              	100.00%
Bootstrap support for Q5KFG5 as seed ortholog is 99%.
Bootstrap support for H3ARP2 as seed ortholog is 98%.

Group of orthologs #1163. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 L.chalumnae:190

P0CP64              	100.00%		H3BD94              	100.00%
Bootstrap support for P0CP64 as seed ortholog is 100%.
Bootstrap support for H3BD94 as seed ortholog is 100%.

Group of orthologs #1164. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 L.chalumnae:190

P0CO52              	100.00%		M3XK96              	100.00%
Bootstrap support for P0CO52 as seed ortholog is 100%.
Bootstrap support for M3XK96 as seed ortholog is 100%.

Group of orthologs #1165. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 L.chalumnae:190

Q5KAS7              	100.00%		H3BI71              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for H3BI71 as seed ortholog is 100%.

Group of orthologs #1166. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:58 L.chalumnae:104

Q5KI63              	100.00%		H3ASI0              	100.00%
                    	       		H2ZUW2              	55.19%
                    	       		H3AY19              	50.00%
Bootstrap support for Q5KI63 as seed ortholog is 92%.
Bootstrap support for H3ASI0 as seed ortholog is 98%.

Group of orthologs #1167. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 L.chalumnae:189

Q5KCY7              	100.00%		M3XK17              	100.00%
                    	       		H3A264              	10.86%
Bootstrap support for Q5KCY7 as seed ortholog is 100%.
Bootstrap support for M3XK17 as seed ortholog is 100%.

Group of orthologs #1168. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:101

Q5KD12              	100.00%		H3A8K0              	100.00%
Bootstrap support for Q5KD12 as seed ortholog is 100%.
Bootstrap support for H3A8K0 as seed ortholog is 99%.

Group of orthologs #1169. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 L.chalumnae:189

Q5K8Y6              	100.00%		H3ATE3              	100.00%
Bootstrap support for Q5K8Y6 as seed ortholog is 100%.
Bootstrap support for H3ATE3 as seed ortholog is 100%.

Group of orthologs #1170. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 L.chalumnae:189

Q5KL68              	100.00%		H3AUY6              	100.00%
Bootstrap support for Q5KL68 as seed ortholog is 100%.
Bootstrap support for H3AUY6 as seed ortholog is 100%.

Group of orthologs #1171. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 L.chalumnae:189

Q5K9V7              	100.00%		H3BG00              	100.00%
Bootstrap support for Q5K9V7 as seed ortholog is 100%.
Bootstrap support for H3BG00 as seed ortholog is 100%.

Group of orthologs #1172. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 L.chalumnae:189

Q5KM68              	100.00%		H3B6Y8              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for H3B6Y8 as seed ortholog is 100%.

Group of orthologs #1173. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 L.chalumnae:188

Q5KBY8              	100.00%		H3AZN1              	100.00%
                    	       		H2ZXS0              	72.69%
                    	       		H3AG23              	11.99%
Bootstrap support for Q5KBY8 as seed ortholog is 100%.
Bootstrap support for H3AZN1 as seed ortholog is 100%.

Group of orthologs #1174. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 L.chalumnae:188

P0CN78              	100.00%		H3A243              	100.00%
Bootstrap support for P0CN78 as seed ortholog is 100%.
Bootstrap support for H3A243 as seed ortholog is 100%.

Group of orthologs #1175. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 L.chalumnae:85

Q5KBA9              	100.00%		H3ADS7              	100.00%
Bootstrap support for Q5KBA9 as seed ortholog is 100%.
Bootstrap support for H3ADS7 as seed ortholog is 100%.

Group of orthologs #1176. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 L.chalumnae:188

Q5KLT5              	100.00%		H3AGJ0              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 100%.
Bootstrap support for H3AGJ0 as seed ortholog is 100%.

Group of orthologs #1177. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 L.chalumnae:188

Q5KIE7              	100.00%		H3B2N8              	100.00%
Bootstrap support for Q5KIE7 as seed ortholog is 100%.
Bootstrap support for H3B2N8 as seed ortholog is 100%.

Group of orthologs #1178. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 L.chalumnae:188

Q5KJA8              	100.00%		H3B904              	100.00%
Bootstrap support for Q5KJA8 as seed ortholog is 100%.
Bootstrap support for H3B904 as seed ortholog is 100%.

Group of orthologs #1179. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 L.chalumnae:66

Q5KGB2              	100.00%		H3AYW3              	100.00%
                    	       		H2ZWG2              	29.89%
Bootstrap support for Q5KGB2 as seed ortholog is 100%.
Bootstrap support for H3AYW3 as seed ortholog is 99%.

Group of orthologs #1180. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 L.chalumnae:105

Q5K7W8              	100.00%		H3B169              	100.00%
                    	       		H2ZYV3              	22.17%
                    	       		H2ZTW7              	18.26%
                    	       		H3A6F5              	16.09%
                    	       		H3B4N0              	13.91%
Bootstrap support for Q5K7W8 as seed ortholog is 100%.
Bootstrap support for H3B169 as seed ortholog is 100%.

Group of orthologs #1181. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 L.chalumnae:186

Q5KLP4              	100.00%		H3B4E6              	100.00%
                    	       		H3BEW8              	70.25%
                    	       		H3A074              	28.75%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for H3B4E6 as seed ortholog is 100%.

Group of orthologs #1182. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 L.chalumnae:70

Q5KJM4              	100.00%		H3AF75              	100.00%
Bootstrap support for Q5KJM4 as seed ortholog is 100%.
Bootstrap support for H3AF75 as seed ortholog is 93%.

Group of orthologs #1183. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 L.chalumnae:186

Q5KJX3              	100.00%		H3B3L9              	100.00%
Bootstrap support for Q5KJX3 as seed ortholog is 100%.
Bootstrap support for H3B3L9 as seed ortholog is 100%.

Group of orthologs #1184. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 L.chalumnae:186

Q5KN16              	100.00%		H3BAE2              	100.00%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for H3BAE2 as seed ortholog is 100%.

Group of orthologs #1185. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5KAX2              	100.00%		H3AE34              	100.00%
Q5KG95              	100.00%		H2ZZD6              	100.00%
                    	       		H2ZXS9              	38.07%
Bootstrap support for Q5KAX2 as seed ortholog is 100%.
Bootstrap support for Q5KG95 as seed ortholog is 100%.
Bootstrap support for H3AE34 as seed ortholog is 100%.
Bootstrap support for H2ZZD6 as seed ortholog is 100%.

Group of orthologs #1186. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5K9A1              	100.00%		H2ZV74              	100.00%
                    	       		H3B1Q4              	20.59%
Bootstrap support for Q5K9A1 as seed ortholog is 100%.
Bootstrap support for H2ZV74 as seed ortholog is 100%.

Group of orthologs #1187. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

P0CM82              	100.00%		H2ZSW5              	100.00%
Bootstrap support for P0CM82 as seed ortholog is 100%.
Bootstrap support for H2ZSW5 as seed ortholog is 100%.

Group of orthologs #1188. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

P0CQ52              	100.00%		H3AJB8              	100.00%
Bootstrap support for P0CQ52 as seed ortholog is 100%.
Bootstrap support for H3AJB8 as seed ortholog is 100%.

Group of orthologs #1189. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5KHZ6              	100.00%		H3AC68              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for H3AC68 as seed ortholog is 100%.

Group of orthologs #1190. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5KJN1              	100.00%		H3AD86              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for H3AD86 as seed ortholog is 100%.

Group of orthologs #1191. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5KA46              	100.00%		H3ARX8              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for H3ARX8 as seed ortholog is 100%.

Group of orthologs #1192. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5KQ70              	100.00%		H3AAX8              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for H3AAX8 as seed ortholog is 100%.

Group of orthologs #1193. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:108

Q5KAU2              	100.00%		H3AUV4              	100.00%
Bootstrap support for Q5KAU2 as seed ortholog is 99%.
Bootstrap support for H3AUV4 as seed ortholog is 99%.

Group of orthologs #1194. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 L.chalumnae:185

Q5KQ40              	100.00%		H3BDF2              	100.00%
Bootstrap support for Q5KQ40 as seed ortholog is 100%.
Bootstrap support for H3BDF2 as seed ortholog is 100%.

Group of orthologs #1195. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 L.chalumnae:184

Q5KE84              	100.00%		H2ZT33              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for H2ZT33 as seed ortholog is 100%.

Group of orthologs #1196. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 L.chalumnae:184

Q5KGP0              	100.00%		H3AAB6              	100.00%
Bootstrap support for Q5KGP0 as seed ortholog is 100%.
Bootstrap support for H3AAB6 as seed ortholog is 100%.

Group of orthologs #1197. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 L.chalumnae:58

Q5KIW7              	100.00%		H3B131              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for H3B131 as seed ortholog is 98%.

Group of orthologs #1198. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:115

Q5KKH7              	100.00%		H2ZX92              	100.00%
                    	       		H3AEB1              	100.00%
Bootstrap support for Q5KKH7 as seed ortholog is 99%.
Bootstrap support for H2ZX92 as seed ortholog is 99%.
Bootstrap support for H3AEB1 as seed ortholog is 99%.

Group of orthologs #1199. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:183

Q5KK13              	100.00%		H3A242              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for H3A242 as seed ortholog is 100%.

Group of orthologs #1200. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:183

Q5KFF3              	100.00%		H3ALU6              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for H3ALU6 as seed ortholog is 100%.

Group of orthologs #1201. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:183

Q5KDF8              	100.00%		H3APQ8              	100.00%
Bootstrap support for Q5KDF8 as seed ortholog is 100%.
Bootstrap support for H3APQ8 as seed ortholog is 100%.

Group of orthologs #1202. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:114

Q5KIE9              	100.00%		H3B057              	100.00%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for H3B057 as seed ortholog is 99%.

Group of orthologs #1203. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:43

Q5KGN1              	100.00%		H3B317              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 99%.
Bootstrap support for H3B317 as seed ortholog is 95%.

Group of orthologs #1204. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:183

Q5KKH3              	100.00%		H3B205              	100.00%
Bootstrap support for Q5KKH3 as seed ortholog is 100%.
Bootstrap support for H3B205 as seed ortholog is 100%.

Group of orthologs #1205. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:183

Q5KEQ2              	100.00%		H3BBA7              	100.00%
Bootstrap support for Q5KEQ2 as seed ortholog is 100%.
Bootstrap support for H3BBA7 as seed ortholog is 100%.

Group of orthologs #1206. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 L.chalumnae:183

Q5KJ89              	100.00%		H3BI49              	100.00%
Bootstrap support for Q5KJ89 as seed ortholog is 100%.
Bootstrap support for H3BI49 as seed ortholog is 100%.

Group of orthologs #1207. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 L.chalumnae:119

Q5KED8              	100.00%		H3B5M9              	100.00%
                    	       		H3ADF7              	41.67%
Bootstrap support for Q5KED8 as seed ortholog is 100%.
Bootstrap support for H3B5M9 as seed ortholog is 100%.

Group of orthologs #1208. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 L.chalumnae:182

Q5KEX8              	100.00%		H3AMK4              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for H3AMK4 as seed ortholog is 100%.

Group of orthologs #1209. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 L.chalumnae:86

Q5KPC4              	100.00%		H2ZZE7              	100.00%
                    	       		H3AEH8              	7.89%
Bootstrap support for Q5KPC4 as seed ortholog is 100%.
Bootstrap support for H2ZZE7 as seed ortholog is 99%.

Group of orthologs #1210. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:43 L.chalumnae:52

Q5KCL3              	100.00%		H3BG70              	100.00%
                    	       		H3BGR3              	43.49%
Bootstrap support for Q5KCL3 as seed ortholog is 86%.
Bootstrap support for H3BG70 as seed ortholog is 91%.

Group of orthologs #1211. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:61 L.chalumnae:118

Q5KNK6              	100.00%		H3ANL3              	100.00%
Bootstrap support for Q5KNK6 as seed ortholog is 97%.
Bootstrap support for H3ANL3 as seed ortholog is 99%.

Group of orthologs #1212. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 L.chalumnae:181

Q5KNC5              	100.00%		H3APF5              	100.00%
Bootstrap support for Q5KNC5 as seed ortholog is 100%.
Bootstrap support for H3APF5 as seed ortholog is 100%.

Group of orthologs #1213. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 L.chalumnae:180

P0CN66              	100.00%		H3AII8              	100.00%
Bootstrap support for P0CN66 as seed ortholog is 100%.
Bootstrap support for H3AII8 as seed ortholog is 100%.

Group of orthologs #1214. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 L.chalumnae:180

Q5KGK7              	100.00%		H3AND0              	100.00%
Bootstrap support for Q5KGK7 as seed ortholog is 100%.
Bootstrap support for H3AND0 as seed ortholog is 100%.

Group of orthologs #1215. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 L.chalumnae:180

Q5KG66              	100.00%		H3AZ19              	100.00%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for H3AZ19 as seed ortholog is 100%.

Group of orthologs #1216. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 L.chalumnae:180

Q5KPF9              	100.00%		H3B677              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for H3B677 as seed ortholog is 100%.

Group of orthologs #1217. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 L.chalumnae:180

Q5KAX8              	100.00%		M3XKR4              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for M3XKR4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:179

Q5KPB3              	100.00%		H3BIA1              	100.00%
                    	       		H3B7T3              	56.05%
                    	       		H3B0A6              	41.61%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for H3BIA1 as seed ortholog is 100%.

Group of orthologs #1219. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:82

Q5KBS2              	100.00%		H2ZUA3              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for H2ZUA3 as seed ortholog is 99%.

Group of orthologs #1220. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:179

P0CR48              	100.00%		H3A2W0              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for H3A2W0 as seed ortholog is 100%.

Group of orthologs #1221. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:107

Q5KHZ1              	100.00%		H3ARW6              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for H3ARW6 as seed ortholog is 99%.

Group of orthologs #1222. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 L.chalumnae:179

Q5KN51              	100.00%		H3B0X8              	100.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for H3B0X8 as seed ortholog is 100%.

Group of orthologs #1223. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 L.chalumnae:178

Q5KPM6              	100.00%		H2ZSY7              	100.00%
Bootstrap support for Q5KPM6 as seed ortholog is 100%.
Bootstrap support for H2ZSY7 as seed ortholog is 100%.

Group of orthologs #1224. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 L.chalumnae:178

Q5KNF9              	100.00%		H3A0F4              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for H3A0F4 as seed ortholog is 100%.

Group of orthologs #1225. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 L.chalumnae:178

Q5KKD1              	100.00%		H3B7G8              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for H3B7G8 as seed ortholog is 100%.

Group of orthologs #1226. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 L.chalumnae:178

Q5KNS3              	100.00%		H3B5B2              	100.00%
Bootstrap support for Q5KNS3 as seed ortholog is 100%.
Bootstrap support for H3B5B2 as seed ortholog is 100%.

Group of orthologs #1227. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 L.chalumnae:178

Q5KIC1              	100.00%		H3BG15              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for H3BG15 as seed ortholog is 100%.

Group of orthologs #1228. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 L.chalumnae:66

Q5K8L7              	100.00%		H3B4I5              	100.00%
                    	       		H3B2D2              	30.29%
                    	       		H3A7G3              	17.45%
Bootstrap support for Q5K8L7 as seed ortholog is 100%.
Bootstrap support for H3B4I5 as seed ortholog is 95%.

Group of orthologs #1229. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:29 L.chalumnae:39

Q5KL88              	100.00%		H3AW71              	100.00%
                    	       		H3BH13              	52.96%
                    	       		H3AUD4              	32.53%
Bootstrap support for Q5KL88 as seed ortholog is 76%.
Bootstrap support for H3AW71 as seed ortholog is 84%.

Group of orthologs #1230. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 L.chalumnae:107

Q5KN56              	100.00%		H3AVZ3              	100.00%
Q5K6U5              	11.66%		H3ABB4              	44.33%
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for H3AVZ3 as seed ortholog is 99%.

Group of orthologs #1231. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 L.chalumnae:176

Q5KI93              	100.00%		H3A0E8              	100.00%
                    	       		H2ZWV6              	45.83%
Bootstrap support for Q5KI93 as seed ortholog is 100%.
Bootstrap support for H3A0E8 as seed ortholog is 100%.

Group of orthologs #1232. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 L.chalumnae:74

Q5KAP0              	100.00%		H3A9G6              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 100%.
Bootstrap support for H3A9G6 as seed ortholog is 99%.

Group of orthologs #1233. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 L.chalumnae:176

P0CR76              	100.00%		H3BIR1              	100.00%
Bootstrap support for P0CR76 as seed ortholog is 100%.
Bootstrap support for H3BIR1 as seed ortholog is 100%.

Group of orthologs #1234. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 L.chalumnae:175

Q5KGD2              	100.00%		H3AHH1              	100.00%
Q5KID2              	24.03%		
Bootstrap support for Q5KGD2 as seed ortholog is 100%.
Bootstrap support for H3AHH1 as seed ortholog is 100%.

Group of orthologs #1235. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 L.chalumnae:175

P0CO28              	100.00%		H3AIP7              	100.00%
Bootstrap support for P0CO28 as seed ortholog is 100%.
Bootstrap support for H3AIP7 as seed ortholog is 100%.

Group of orthologs #1236. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 L.chalumnae:53

P0CO00              	100.00%		H3AVH8              	100.00%
Bootstrap support for P0CO00 as seed ortholog is 100%.
Bootstrap support for H3AVH8 as seed ortholog is 99%.

Group of orthologs #1237. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 L.chalumnae:175

Q5KB61              	100.00%		H3ASQ1              	100.00%
Bootstrap support for Q5KB61 as seed ortholog is 100%.
Bootstrap support for H3ASQ1 as seed ortholog is 100%.

Group of orthologs #1238. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:174

Q5KHL4              	100.00%		H3APR9              	100.00%
                    	       		H3BBP0              	90.61%
Bootstrap support for Q5KHL4 as seed ortholog is 99%.
Bootstrap support for H3APR9 as seed ortholog is 100%.

Group of orthologs #1239. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 L.chalumnae:111

Q5KH50              	100.00%		H2ZRK8              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for H2ZRK8 as seed ortholog is 99%.

Group of orthologs #1240. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:32 L.chalumnae:91

Q5K705              	100.00%		M3XKY6              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 71%.
Alternative seed ortholog is Q5KH65 (32 bits away from this cluster)
Bootstrap support for M3XKY6 as seed ortholog is 93%.

Group of orthologs #1241. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 L.chalumnae:47

Q5KNP2              	100.00%		M3XID3              	100.00%
                    	       		H3B275              	54.53%
                    	       		H3AAS5              	54.29%
                    	       		H2ZYE2              	28.19%
                    	       		H3A8G0              	25.67%
                    	       		H3BI24              	21.84%
                    	       		H3AJ64              	17.94%
Bootstrap support for Q5KNP2 as seed ortholog is 100%.
Bootstrap support for M3XID3 as seed ortholog is 76%.

Group of orthologs #1242. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 L.chalumnae:0

Q5KMD1              	100.00%		H3A169              	100.00%
                    	       		H3AS99              	38.81%
Bootstrap support for Q5KMD1 as seed ortholog is 100%.
Bootstrap support for H3A169 as seed ortholog is 50%.
Alternative seed ortholog is H3A878 (0 bits away from this cluster)

Group of orthologs #1243. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 L.chalumnae:173

Q5KGV9              	100.00%		H3AXN5              	100.00%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for H3AXN5 as seed ortholog is 100%.

Group of orthologs #1244. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 L.chalumnae:173

P0CS80              	100.00%		H3BFC0              	100.00%
Bootstrap support for P0CS80 as seed ortholog is 100%.
Bootstrap support for H3BFC0 as seed ortholog is 100%.

Group of orthologs #1245. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 L.chalumnae:173

Q5KB44              	100.00%		H3BB04              	100.00%
Bootstrap support for Q5KB44 as seed ortholog is 100%.
Bootstrap support for H3BB04 as seed ortholog is 100%.

Group of orthologs #1246. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 L.chalumnae:172

Q5K7J3              	100.00%		H3B0Y4              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for H3B0Y4 as seed ortholog is 100%.

Group of orthologs #1247. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:82 L.chalumnae:64

Q5KJH5              	100.00%		H3ARI8              	100.00%
Bootstrap support for Q5KJH5 as seed ortholog is 98%.
Bootstrap support for H3ARI8 as seed ortholog is 95%.

Group of orthologs #1248. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:171

Q5KCN0              	100.00%		H3AFJ8              	100.00%
                    	       		H3BI20              	41.43%
                    	       		H3ARE4              	23.98%
Bootstrap support for Q5KCN0 as seed ortholog is 100%.
Bootstrap support for H3AFJ8 as seed ortholog is 100%.

Group of orthologs #1249. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:171

Q5KJP2              	100.00%		H3AJJ9              	100.00%
                    	       		H3BCN0              	64.15%
                    	       		H3B2E3              	22.25%
Bootstrap support for Q5KJP2 as seed ortholog is 100%.
Bootstrap support for H3AJJ9 as seed ortholog is 100%.

Group of orthologs #1250. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:76

Q5KA56              	100.00%		H3BDU2              	100.00%
                    	       		H3A0X5              	39.12%
                    	       		H3A105              	29.50%
Bootstrap support for Q5KA56 as seed ortholog is 100%.
Bootstrap support for H3BDU2 as seed ortholog is 97%.

Group of orthologs #1251. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:73

Q5KEP7              	100.00%		H3A3L7              	100.00%
                    	       		H3BDI2              	100.00%
Bootstrap support for Q5KEP7 as seed ortholog is 100%.
Bootstrap support for H3A3L7 as seed ortholog is 93%.
Bootstrap support for H3BDI2 as seed ortholog is 95%.

Group of orthologs #1252. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:38

Q5KAU6              	100.00%		H3A0X1              	100.00%
Bootstrap support for Q5KAU6 as seed ortholog is 100%.
Bootstrap support for H3A0X1 as seed ortholog is 81%.

Group of orthologs #1253. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:171

Q5KBT3              	100.00%		H3ASE1              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for H3ASE1 as seed ortholog is 100%.

Group of orthologs #1254. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:69

Q5KIG3              	100.00%		H3AQ78              	100.00%
Bootstrap support for Q5KIG3 as seed ortholog is 100%.
Bootstrap support for H3AQ78 as seed ortholog is 86%.

Group of orthologs #1255. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:171

Q5KCF0              	100.00%		H3B549              	100.00%
Bootstrap support for Q5KCF0 as seed ortholog is 100%.
Bootstrap support for H3B549 as seed ortholog is 100%.

Group of orthologs #1256. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 L.chalumnae:171

P0CQ50              	100.00%		H3BCS7              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for H3BCS7 as seed ortholog is 100%.

Group of orthologs #1257. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:42

P0CO02              	100.00%		H3A5E7              	100.00%
                    	       		H2ZS39              	37.35%
                    	       		H3A427              	37.35%
                    	       		H2ZZP4              	33.73%
                    	       		H3A2S8              	25.30%
                    	       		H3A485              	20.48%
                    	       		H3AQ34              	18.07%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for H3A5E7 as seed ortholog is 99%.

Group of orthologs #1258. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:44 L.chalumnae:170

Q5KN11              	100.00%		H2ZZ92              	100.00%
Q5KKI9              	21.49%		H2ZYQ2              	22.41%
Q5KJK5              	5.62%		
Bootstrap support for Q5KN11 as seed ortholog is 95%.
Bootstrap support for H2ZZ92 as seed ortholog is 100%.

Group of orthologs #1259. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:170

Q5KAJ2              	100.00%		H2ZWJ7              	100.00%
                    	       		H3AWL4              	54.08%
                    	       		H3B389              	36.96%
Bootstrap support for Q5KAJ2 as seed ortholog is 100%.
Bootstrap support for H2ZWJ7 as seed ortholog is 100%.

Group of orthologs #1260. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:170

P0CM26              	100.00%		H3AW49              	100.00%
                    	       		H3AC99              	54.66%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for H3AW49 as seed ortholog is 100%.

Group of orthologs #1261. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:170

Q5KGJ8              	100.00%		H3AXG8              	100.00%
                    	       		H3B6R3              	5.33%
Bootstrap support for Q5KGJ8 as seed ortholog is 100%.
Bootstrap support for H3AXG8 as seed ortholog is 100%.

Group of orthologs #1262. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:56

Q5KPB8              	100.00%		M3XJ20              	100.00%
                    	       		H3AF61              	38.72%
Bootstrap support for Q5KPB8 as seed ortholog is 100%.
Bootstrap support for M3XJ20 as seed ortholog is 89%.

Group of orthologs #1263. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:116

Q5KJP6              	100.00%		H3A2B6              	100.00%
Bootstrap support for Q5KJP6 as seed ortholog is 100%.
Bootstrap support for H3A2B6 as seed ortholog is 99%.

Group of orthologs #1264. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:170

Q5KJ55              	100.00%		H3AMA5              	100.00%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for H3AMA5 as seed ortholog is 100%.

Group of orthologs #1265. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 L.chalumnae:170

Q5KL21              	100.00%		H3BA89              	100.00%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for H3BA89 as seed ortholog is 100%.

Group of orthologs #1266. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:11 L.chalumnae:169

Q5KJF0              	100.00%		H3AA15              	100.00%
Bootstrap support for Q5KJF0 as seed ortholog is 62%.
Alternative seed ortholog is Q5KN08 (11 bits away from this cluster)
Bootstrap support for H3AA15 as seed ortholog is 100%.

Group of orthologs #1267. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 L.chalumnae:169

P0CQ12              	100.00%		H3B8Y0              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for H3B8Y0 as seed ortholog is 100%.

Group of orthologs #1268. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 L.chalumnae:169

Q5K9W6              	100.00%		H3BI06              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for H3BI06 as seed ortholog is 100%.

Group of orthologs #1269. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

Q5KIF5              	100.00%		H3B274              	100.00%
                    	       		H3A8D8              	64.45%
Bootstrap support for Q5KIF5 as seed ortholog is 100%.
Bootstrap support for H3B274 as seed ortholog is 100%.

Group of orthologs #1270. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

P0CM76              	100.00%		H3A1M6              	100.00%
Bootstrap support for P0CM76 as seed ortholog is 100%.
Bootstrap support for H3A1M6 as seed ortholog is 100%.

Group of orthologs #1271. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

Q5KKW8              	100.00%		H3A535              	100.00%
Bootstrap support for Q5KKW8 as seed ortholog is 100%.
Bootstrap support for H3A535 as seed ortholog is 100%.

Group of orthologs #1272. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

Q5KCH8              	100.00%		H3AEB3              	100.00%
Bootstrap support for Q5KCH8 as seed ortholog is 100%.
Bootstrap support for H3AEB3 as seed ortholog is 100%.

Group of orthologs #1273. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

Q5K9P5              	100.00%		H3AQV2              	100.00%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for H3AQV2 as seed ortholog is 100%.

Group of orthologs #1274. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:62

P0CP86              	100.00%		H3B673              	100.00%
Bootstrap support for P0CP86 as seed ortholog is 100%.
Bootstrap support for H3B673 as seed ortholog is 98%.

Group of orthologs #1275. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

Q5KJ67              	100.00%		H3BBX4              	100.00%
Bootstrap support for Q5KJ67 as seed ortholog is 100%.
Bootstrap support for H3BBX4 as seed ortholog is 100%.

Group of orthologs #1276. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 L.chalumnae:168

Q5KK09              	100.00%		H3BDH3              	100.00%
Bootstrap support for Q5KK09 as seed ortholog is 100%.
Bootstrap support for H3BDH3 as seed ortholog is 100%.

Group of orthologs #1277. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:108

Q5KHV8              	100.00%		H3B824              	100.00%
                    	       		H3BAL5              	69.00%
Bootstrap support for Q5KHV8 as seed ortholog is 99%.
Bootstrap support for H3B824 as seed ortholog is 99%.

Group of orthologs #1278. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:83

Q5K6W9              	100.00%		H3AQJ2              	100.00%
Bootstrap support for Q5K6W9 as seed ortholog is 99%.
Bootstrap support for H3AQJ2 as seed ortholog is 99%.

Group of orthologs #1279. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 L.chalumnae:167

Q5KMG9              	100.00%		H3AIF3              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for H3AIF3 as seed ortholog is 100%.

Group of orthologs #1280. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 L.chalumnae:167

Q5K7C8              	100.00%		H3BB50              	100.00%
Bootstrap support for Q5K7C8 as seed ortholog is 100%.
Bootstrap support for H3BB50 as seed ortholog is 100%.

Group of orthologs #1281. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 L.chalumnae:99

Q5KGI4              	100.00%		H3B2X4              	100.00%
Bootstrap support for Q5KGI4 as seed ortholog is 100%.
Bootstrap support for H3B2X4 as seed ortholog is 99%.

Group of orthologs #1282. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 L.chalumnae:167

Q5K710              	100.00%		H3BHU1              	100.00%
Bootstrap support for Q5K710 as seed ortholog is 100%.
Bootstrap support for H3BHU1 as seed ortholog is 100%.

Group of orthologs #1283. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 L.chalumnae:107

Q5KFD4              	100.00%		H3BHE6              	100.00%
Bootstrap support for Q5KFD4 as seed ortholog is 100%.
Bootstrap support for H3BHE6 as seed ortholog is 99%.

Group of orthologs #1284. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:166

Q5KLM0              	100.00%		H3B840              	100.00%
                    	       		H3AGS7              	35.82%
                    	       		H2ZWX7              	34.29%
Bootstrap support for Q5KLM0 as seed ortholog is 100%.
Bootstrap support for H3B840 as seed ortholog is 100%.

Group of orthologs #1285. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:166

Q5KK99              	100.00%		H3A455              	100.00%
                    	       		H3AG94              	85.71%
Bootstrap support for Q5KK99 as seed ortholog is 100%.
Bootstrap support for H3A455 as seed ortholog is 100%.

Group of orthologs #1286. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:94

Q5KPH8              	100.00%		H3B3I2              	100.00%
                    	       		H3A0N6              	44.95%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for H3B3I2 as seed ortholog is 99%.

Group of orthologs #1287. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:166

Q5KHK0              	100.00%		H3A5P0              	100.00%
Bootstrap support for Q5KHK0 as seed ortholog is 100%.
Bootstrap support for H3A5P0 as seed ortholog is 100%.

Group of orthologs #1288. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:166

Q5KMY6              	100.00%		H3AAG2              	100.00%
Bootstrap support for Q5KMY6 as seed ortholog is 100%.
Bootstrap support for H3AAG2 as seed ortholog is 100%.

Group of orthologs #1289. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 L.chalumnae:166

Q5KE92              	100.00%		H3B800              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for H3B800 as seed ortholog is 100%.

Group of orthologs #1290. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 L.chalumnae:165

Q5KM24              	100.00%		H3AC41              	100.00%
                    	       		H3BCW9              	39.85%
Bootstrap support for Q5KM24 as seed ortholog is 100%.
Bootstrap support for H3AC41 as seed ortholog is 100%.

Group of orthologs #1291. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 L.chalumnae:165

Q5KKY5              	100.00%		H3A519              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for H3A519 as seed ortholog is 100%.

Group of orthologs #1292. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 L.chalumnae:165

Q5K888              	100.00%		H3B5K8              	100.00%
Bootstrap support for Q5K888 as seed ortholog is 100%.
Bootstrap support for H3B5K8 as seed ortholog is 100%.

Group of orthologs #1293. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 L.chalumnae:104

Q5KJI9              	100.00%		H3AWP8              	100.00%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for H3AWP8 as seed ortholog is 99%.

Group of orthologs #1294. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:38

Q5KJW2              	100.00%		H3B157              	100.00%
Bootstrap support for Q5KJW2 as seed ortholog is 99%.
Bootstrap support for H3B157 as seed ortholog is 95%.

Group of orthologs #1295. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:103

Q5KHJ6              	100.00%		H3AUW7              	100.00%
                    	       		H3ADC3              	43.26%
                    	       		H3BB07              	41.54%
                    	       		H3A2Q8              	36.55%
Bootstrap support for Q5KHJ6 as seed ortholog is 100%.
Bootstrap support for H3AUW7 as seed ortholog is 97%.

Group of orthologs #1296. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:164

Q5KE38              	100.00%		H2ZW30              	100.00%
                    	       		H3BH60              	41.95%
                    	       		H3AN91              	38.70%
Bootstrap support for Q5KE38 as seed ortholog is 100%.
Bootstrap support for H2ZW30 as seed ortholog is 100%.

Group of orthologs #1297. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:164

Q5KGV8              	100.00%		H3ADV1              	100.00%
Bootstrap support for Q5KGV8 as seed ortholog is 100%.
Bootstrap support for H3ADV1 as seed ortholog is 100%.

Group of orthologs #1298. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:164

Q5KK68              	100.00%		H3B814              	100.00%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for H3B814 as seed ortholog is 100%.

Group of orthologs #1299. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 L.chalumnae:164

Q5KJ57              	100.00%		H3BFN3              	100.00%
Bootstrap support for Q5KJ57 as seed ortholog is 100%.
Bootstrap support for H3BFN3 as seed ortholog is 100%.

Group of orthologs #1300. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:163

Q5KN65              	100.00%		H3AGQ4              	100.00%
                    	       		H3ABM3              	92.86%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for H3AGQ4 as seed ortholog is 100%.

Group of orthologs #1301. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:163

Q5K741              	100.00%		H3AK09              	100.00%
Bootstrap support for Q5K741 as seed ortholog is 100%.
Bootstrap support for H3AK09 as seed ortholog is 100%.

Group of orthologs #1302. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:163

Q5KH16              	100.00%		H3AIB6              	100.00%
Bootstrap support for Q5KH16 as seed ortholog is 100%.
Bootstrap support for H3AIB6 as seed ortholog is 100%.

Group of orthologs #1303. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:163

Q5K9S1              	100.00%		H3B2B4              	100.00%
Bootstrap support for Q5K9S1 as seed ortholog is 100%.
Bootstrap support for H3B2B4 as seed ortholog is 100%.

Group of orthologs #1304. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:45

Q5KD66              	100.00%		H3B219              	100.00%
Bootstrap support for Q5KD66 as seed ortholog is 97%.
Bootstrap support for H3B219 as seed ortholog is 85%.

Group of orthologs #1305. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:163

Q5KLL5              	100.00%		H3B293              	100.00%
Bootstrap support for Q5KLL5 as seed ortholog is 100%.
Bootstrap support for H3B293 as seed ortholog is 100%.

Group of orthologs #1306. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 L.chalumnae:116

Q5KIK8              	100.00%		H3BH65              	100.00%
Bootstrap support for Q5KIK8 as seed ortholog is 100%.
Bootstrap support for H3BH65 as seed ortholog is 99%.

Group of orthologs #1307. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 L.chalumnae:162

Q5KEW0              	100.00%		H3A8Y7              	100.00%
                    	       		H3BDI8              	39.35%
                    	       		H3AMT3              	35.93%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for H3A8Y7 as seed ortholog is 100%.

Group of orthologs #1308. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 L.chalumnae:162

Q5KC23              	100.00%		H3AP99              	100.00%
Bootstrap support for Q5KC23 as seed ortholog is 100%.
Bootstrap support for H3AP99 as seed ortholog is 100%.

Group of orthologs #1309. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 L.chalumnae:162

Q5KF11              	100.00%		H3B8D0              	100.00%
Bootstrap support for Q5KF11 as seed ortholog is 100%.
Bootstrap support for H3B8D0 as seed ortholog is 100%.

Group of orthologs #1310. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 L.chalumnae:162

Q5KID5              	100.00%		H3B9L8              	100.00%
Bootstrap support for Q5KID5 as seed ortholog is 100%.
Bootstrap support for H3B9L8 as seed ortholog is 100%.

Group of orthologs #1311. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:36

Q5KLL8              	100.00%		H3BGB2              	100.00%
                    	       		H3APR1              	36.55%
Bootstrap support for Q5KLL8 as seed ortholog is 100%.
Bootstrap support for H3BGB2 as seed ortholog is 74%.
Alternative seed ortholog is H3B8K3 (36 bits away from this cluster)

Group of orthologs #1312. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:161

Q5KHG1              	100.00%		H2ZSG7              	100.00%
Bootstrap support for Q5KHG1 as seed ortholog is 100%.
Bootstrap support for H2ZSG7 as seed ortholog is 100%.

Group of orthologs #1313. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:161

P0CO36              	100.00%		H3A5X8              	100.00%
Bootstrap support for P0CO36 as seed ortholog is 100%.
Bootstrap support for H3A5X8 as seed ortholog is 100%.

Group of orthologs #1314. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:161

Q5KAQ1              	100.00%		H3AEI5              	100.00%
Bootstrap support for Q5KAQ1 as seed ortholog is 100%.
Bootstrap support for H3AEI5 as seed ortholog is 100%.

Group of orthologs #1315. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:161

Q5KHB9              	100.00%		H3AE52              	100.00%
Bootstrap support for Q5KHB9 as seed ortholog is 100%.
Bootstrap support for H3AE52 as seed ortholog is 100%.

Group of orthologs #1316. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:161

Q5K7B3              	100.00%		H3AW82              	100.00%
Bootstrap support for Q5K7B3 as seed ortholog is 100%.
Bootstrap support for H3AW82 as seed ortholog is 100%.

Group of orthologs #1317. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 L.chalumnae:89

Q5KKS4              	100.00%		H3B5T9              	100.00%
Bootstrap support for Q5KKS4 as seed ortholog is 100%.
Bootstrap support for H3B5T9 as seed ortholog is 99%.

Group of orthologs #1318. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 L.chalumnae:160

Q5KLJ6              	100.00%		H3A097              	100.00%
                    	       		H3AG26              	100.00%
                    	       		H3BG90              	87.60%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for H3A097 as seed ortholog is 100%.
Bootstrap support for H3AG26 as seed ortholog is 100%.

Group of orthologs #1319. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 L.chalumnae:57

P0CL94              	100.00%		H3ATC3              	100.00%
                    	       		H3B980              	37.34%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for H3ATC3 as seed ortholog is 95%.

Group of orthologs #1320. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 L.chalumnae:36

Q5KDG7              	100.00%		H2ZZK8              	100.00%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for H2ZZK8 as seed ortholog is 75%.

Group of orthologs #1321. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:39 L.chalumnae:86

Q5K6U2              	100.00%		H3AJP2              	100.00%
Bootstrap support for Q5K6U2 as seed ortholog is 86%.
Bootstrap support for H3AJP2 as seed ortholog is 99%.

Group of orthologs #1322. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 L.chalumnae:160

Q5KIE3              	100.00%		H3AF95              	100.00%
Bootstrap support for Q5KIE3 as seed ortholog is 100%.
Bootstrap support for H3AF95 as seed ortholog is 100%.

Group of orthologs #1323. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 L.chalumnae:160

Q5KEC3              	100.00%		H3B675              	100.00%
Bootstrap support for Q5KEC3 as seed ortholog is 100%.
Bootstrap support for H3B675 as seed ortholog is 100%.

Group of orthologs #1324. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:55 L.chalumnae:13

Q5K6W6              	100.00%		H3AI14              	100.00%
                    	       		H3B152              	50.23%
                    	       		H3ASZ3              	25.42%
                    	       		H3B3G3              	17.96%
                    	       		H3A8K6              	7.31%
                    	       		H3B5W8              	6.39%
Bootstrap support for Q5K6W6 as seed ortholog is 95%.
Bootstrap support for H3AI14 as seed ortholog is 52%.
Alternative seed ortholog is H3B0L4 (13 bits away from this cluster)

Group of orthologs #1325. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:159

Q5KF20              	100.00%		H3AAQ8              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 100%.
Bootstrap support for H3AAQ8 as seed ortholog is 100%.

Group of orthologs #1326. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:159

Q5KMJ7              	100.00%		H3AWK8              	100.00%
Bootstrap support for Q5KMJ7 as seed ortholog is 100%.
Bootstrap support for H3AWK8 as seed ortholog is 100%.

Group of orthologs #1327. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 L.chalumnae:159

Q5KJ08              	100.00%		H3BG24              	100.00%
Bootstrap support for Q5KJ08 as seed ortholog is 100%.
Bootstrap support for H3BG24 as seed ortholog is 100%.

Group of orthologs #1328. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 L.chalumnae:158

Q5KFJ5              	100.00%		H3ARF8              	100.00%
Bootstrap support for Q5KFJ5 as seed ortholog is 100%.
Bootstrap support for H3ARF8 as seed ortholog is 100%.

Group of orthologs #1329. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:158

Q5KDX1              	100.00%		H3AVS6              	100.00%
Bootstrap support for Q5KDX1 as seed ortholog is 86%.
Bootstrap support for H3AVS6 as seed ortholog is 100%.

Group of orthologs #1330. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 L.chalumnae:158

Q5KFJ2              	100.00%		H3AUE6              	100.00%
Bootstrap support for Q5KFJ2 as seed ortholog is 100%.
Bootstrap support for H3AUE6 as seed ortholog is 100%.

Group of orthologs #1331. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

P0CP08              	100.00%		H3A7G1              	100.00%
                    	       		H3AQN7              	37.80%
                    	       		H3AHI0              	6.91%
Bootstrap support for P0CP08 as seed ortholog is 100%.
Bootstrap support for H3A7G1 as seed ortholog is 100%.

Group of orthologs #1332. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:88

Q5KEX0              	100.00%		H3AUB8              	100.00%
                    	       		H3AIT2              	34.78%
Bootstrap support for Q5KEX0 as seed ortholog is 100%.
Bootstrap support for H3AUB8 as seed ortholog is 97%.

Group of orthologs #1333. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:46 L.chalumnae:39

Q5KLY1              	100.00%		H3AVR2              	100.00%
                    	       		H3BI91              	55.12%
Bootstrap support for Q5KLY1 as seed ortholog is 94%.
Bootstrap support for H3AVR2 as seed ortholog is 98%.

Group of orthologs #1334. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KAG9              	100.00%		H3A8T8              	100.00%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for H3A8T8 as seed ortholog is 100%.

Group of orthologs #1335. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KIZ4              	100.00%		H3A8N6              	100.00%
Bootstrap support for Q5KIZ4 as seed ortholog is 100%.
Bootstrap support for H3A8N6 as seed ortholog is 100%.

Group of orthologs #1336. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KN77              	100.00%		H3AUM4              	100.00%
Bootstrap support for Q5KN77 as seed ortholog is 100%.
Bootstrap support for H3AUM4 as seed ortholog is 100%.

Group of orthologs #1337. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5K7I9              	100.00%		H3BGJ0              	100.00%
Bootstrap support for Q5K7I9 as seed ortholog is 100%.
Bootstrap support for H3BGJ0 as seed ortholog is 100%.

Group of orthologs #1338. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KJT1              	100.00%		H3B3H8              	100.00%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for H3B3H8 as seed ortholog is 100%.

Group of orthologs #1339. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KF78              	100.00%		H3B9R6              	100.00%
Bootstrap support for Q5KF78 as seed ortholog is 100%.
Bootstrap support for H3B9R6 as seed ortholog is 100%.

Group of orthologs #1340. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KPB1              	100.00%		H3B1G7              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for H3B1G7 as seed ortholog is 100%.

Group of orthologs #1341. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KDH7              	100.00%		H3BDR2              	100.00%
Bootstrap support for Q5KDH7 as seed ortholog is 100%.
Bootstrap support for H3BDR2 as seed ortholog is 100%.

Group of orthologs #1342. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KIH4              	100.00%		H3B9D0              	100.00%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for H3B9D0 as seed ortholog is 100%.

Group of orthologs #1343. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 L.chalumnae:157

Q5KME8              	100.00%		H3BIK0              	100.00%
Bootstrap support for Q5KME8 as seed ortholog is 100%.
Bootstrap support for H3BIK0 as seed ortholog is 100%.

Group of orthologs #1344. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 L.chalumnae:77

Q5KAW2              	100.00%		M3XGT8              	100.00%
                    	       		H3ARK1              	56.93%
                    	       		H2ZW44              	50.37%
Bootstrap support for Q5KAW2 as seed ortholog is 100%.
Bootstrap support for M3XGT8 as seed ortholog is 98%.

Group of orthologs #1345. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 L.chalumnae:156

Q5KAU4              	100.00%		H3B655              	100.00%
                    	       		H3AS63              	56.65%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for H3B655 as seed ortholog is 100%.

Group of orthologs #1346. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 L.chalumnae:156

P0CN52              	100.00%		H2ZT96              	100.00%
Bootstrap support for P0CN52 as seed ortholog is 100%.
Bootstrap support for H2ZT96 as seed ortholog is 100%.

Group of orthologs #1347. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 L.chalumnae:70

Q5KBG5              	100.00%		H2ZVQ1              	100.00%
Bootstrap support for Q5KBG5 as seed ortholog is 100%.
Bootstrap support for H2ZVQ1 as seed ortholog is 99%.

Group of orthologs #1348. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 L.chalumnae:156

Q5KFE4              	100.00%		H3ALC4              	100.00%
Bootstrap support for Q5KFE4 as seed ortholog is 100%.
Bootstrap support for H3ALC4 as seed ortholog is 100%.

Group of orthologs #1349. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:33 L.chalumnae:156

Q5KQ86              	100.00%		H3AIQ9              	100.00%
Bootstrap support for Q5KQ86 as seed ortholog is 81%.
Bootstrap support for H3AIQ9 as seed ortholog is 100%.

Group of orthologs #1350. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 L.chalumnae:156

Q5KET9              	100.00%		H3B844              	100.00%
Bootstrap support for Q5KET9 as seed ortholog is 100%.
Bootstrap support for H3B844 as seed ortholog is 100%.

Group of orthologs #1351. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:78

Q5KF49              	100.00%		H3BFM6              	100.00%
Bootstrap support for Q5KF49 as seed ortholog is 94%.
Bootstrap support for H3BFM6 as seed ortholog is 98%.

Group of orthologs #1352. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:76

P0CR34              	100.00%		H3BBP3              	100.00%
                    	       		H3A183              	17.95%
                    	       		M3XKG2              	12.82%
                    	       		H3AMG1              	12.61%
Bootstrap support for P0CR34 as seed ortholog is 99%.
Bootstrap support for H3BBP3 as seed ortholog is 99%.

Group of orthologs #1353. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:155

Q5KL10              	100.00%		H3AQL9              	100.00%
                    	       		H3B439              	7.99%
Bootstrap support for Q5KL10 as seed ortholog is 100%.
Bootstrap support for H3AQL9 as seed ortholog is 100%.

Group of orthologs #1354. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:155

P0CR82              	100.00%		H3A5C2              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for H3A5C2 as seed ortholog is 100%.

Group of orthologs #1355. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:97

Q5K762              	100.00%		H3A6R2              	100.00%
Bootstrap support for Q5K762 as seed ortholog is 100%.
Bootstrap support for H3A6R2 as seed ortholog is 99%.

Group of orthologs #1356. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:102

Q5KLP3              	100.00%		H2ZTK0              	100.00%
Bootstrap support for Q5KLP3 as seed ortholog is 100%.
Bootstrap support for H2ZTK0 as seed ortholog is 100%.

Group of orthologs #1357. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:155

Q5KF30              	100.00%		H3A7R2              	100.00%
Bootstrap support for Q5KF30 as seed ortholog is 100%.
Bootstrap support for H3A7R2 as seed ortholog is 100%.

Group of orthologs #1358. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:155

Q5KAN9              	100.00%		H3AQ57              	100.00%
Bootstrap support for Q5KAN9 as seed ortholog is 100%.
Bootstrap support for H3AQ57 as seed ortholog is 100%.

Group of orthologs #1359. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:155

P0CS06              	100.00%		H3B9Z7              	100.00%
Bootstrap support for P0CS06 as seed ortholog is 100%.
Bootstrap support for H3B9Z7 as seed ortholog is 100%.

Group of orthologs #1360. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 L.chalumnae:155

Q5KM29              	100.00%		H3B0C0              	100.00%
Bootstrap support for Q5KM29 as seed ortholog is 100%.
Bootstrap support for H3B0C0 as seed ortholog is 100%.

Group of orthologs #1361. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:154

Q5K8W2              	100.00%		H3BDA3              	100.00%
                    	       		H3B5R9              	10.27%
Bootstrap support for Q5K8W2 as seed ortholog is 100%.
Bootstrap support for H3BDA3 as seed ortholog is 100%.

Group of orthologs #1362. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 L.chalumnae:154

Q5KEX7              	100.00%		H3A3D7              	100.00%
Bootstrap support for Q5KEX7 as seed ortholog is 100%.
Bootstrap support for H3A3D7 as seed ortholog is 100%.

Group of orthologs #1363. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 L.chalumnae:154

Q5KBH4              	100.00%		H3AGP5              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for H3AGP5 as seed ortholog is 100%.

Group of orthologs #1364. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 L.chalumnae:154

Q5KMC4              	100.00%		H3ACJ4              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for H3ACJ4 as seed ortholog is 100%.

Group of orthologs #1365. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:10 L.chalumnae:153

Q5K778              	100.00%		H3BFE6              	100.00%
                    	       		H3BG75              	29.01%
Bootstrap support for Q5K778 as seed ortholog is 90%.
Bootstrap support for H3BFE6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:52

Q5K766              	100.00%		H3BFP2              	100.00%
                    	       		H3ANF9              	47.67%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for H3BFP2 as seed ortholog is 97%.

Group of orthologs #1367. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:153

Q5KCC1              	100.00%		H3A9W2              	100.00%
Bootstrap support for Q5KCC1 as seed ortholog is 100%.
Bootstrap support for H3A9W2 as seed ortholog is 100%.

Group of orthologs #1368. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:153

Q5K6Y5              	100.00%		H3AJA5              	100.00%
Bootstrap support for Q5K6Y5 as seed ortholog is 100%.
Bootstrap support for H3AJA5 as seed ortholog is 100%.

Group of orthologs #1369. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:153

Q5KAR1              	100.00%		H3AWI4              	100.00%
Bootstrap support for Q5KAR1 as seed ortholog is 100%.
Bootstrap support for H3AWI4 as seed ortholog is 100%.

Group of orthologs #1370. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:30

Q5KFL6              	100.00%		H3AYU6              	100.00%
Bootstrap support for Q5KFL6 as seed ortholog is 100%.
Bootstrap support for H3AYU6 as seed ortholog is 93%.

Group of orthologs #1371. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:153

Q5KMU1              	100.00%		H3B1S7              	100.00%
Bootstrap support for Q5KMU1 as seed ortholog is 100%.
Bootstrap support for H3B1S7 as seed ortholog is 100%.

Group of orthologs #1372. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 L.chalumnae:153

Q5KFQ4              	100.00%		H3BGK8              	100.00%
Bootstrap support for Q5KFQ4 as seed ortholog is 100%.
Bootstrap support for H3BGK8 as seed ortholog is 100%.

Group of orthologs #1373. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 L.chalumnae:152

Q5KGD6              	100.00%		H3A0C5              	100.00%
                    	       		H3AV39              	53.07%
                    	       		H3AC46              	46.69%
Bootstrap support for Q5KGD6 as seed ortholog is 100%.
Bootstrap support for H3A0C5 as seed ortholog is 100%.

Group of orthologs #1374. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 L.chalumnae:152

Q5KI19              	100.00%		H2ZY95              	100.00%
                    	       		H2ZZ77              	63.76%
Bootstrap support for Q5KI19 as seed ortholog is 100%.
Bootstrap support for H2ZY95 as seed ortholog is 100%.

Group of orthologs #1375. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:152

Q5KE51              	100.00%		M3XKM1              	100.00%
                    	       		H3B3P2              	37.27%
Bootstrap support for Q5KE51 as seed ortholog is 99%.
Bootstrap support for M3XKM1 as seed ortholog is 100%.

Group of orthologs #1376. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 L.chalumnae:76

Q5KIP7              	100.00%		H3A604              	100.00%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for H3A604 as seed ortholog is 97%.

Group of orthologs #1377. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:68 L.chalumnae:151

Q5KG53              	100.00%		H3AUI9              	100.00%
Q5KEM9              	9.33%		
Q5KLC1              	9.33%		
Q5KFZ8              	8.72%		
Bootstrap support for Q5KG53 as seed ortholog is 95%.
Bootstrap support for H3AUI9 as seed ortholog is 100%.

Group of orthologs #1378. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

P0CR54              	100.00%		H3A8N3              	100.00%
                    	       		H3A6G0              	59.45%
                    	       		H3AHT6              	55.67%
Bootstrap support for P0CR54 as seed ortholog is 100%.
Bootstrap support for H3A8N3 as seed ortholog is 100%.

Group of orthologs #1379. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5K8V6              	100.00%		H3AFY6              	100.00%
                    	       		H3AJM5              	34.58%
Bootstrap support for Q5K8V6 as seed ortholog is 100%.
Bootstrap support for H3AFY6 as seed ortholog is 100%.

Group of orthologs #1380. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KIH1              	100.00%		H3AF24              	100.00%
                    	       		H3AA18              	48.28%
Bootstrap support for Q5KIH1 as seed ortholog is 100%.
Bootstrap support for H3AF24 as seed ortholog is 100%.

Group of orthologs #1381. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KBJ2              	100.00%		H3B6I8              	100.00%
Q5KBJ5              	48.40%		
Bootstrap support for Q5KBJ2 as seed ortholog is 100%.
Bootstrap support for H3B6I8 as seed ortholog is 100%.

Group of orthologs #1382. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KDS7              	100.00%		H3A5B8              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 100%.
Bootstrap support for H3A5B8 as seed ortholog is 100%.

Group of orthologs #1383. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KP38              	100.00%		H3AE06              	100.00%
Bootstrap support for Q5KP38 as seed ortholog is 100%.
Bootstrap support for H3AE06 as seed ortholog is 100%.

Group of orthologs #1384. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KDT1              	100.00%		H3AWB1              	100.00%
Bootstrap support for Q5KDT1 as seed ortholog is 100%.
Bootstrap support for H3AWB1 as seed ortholog is 100%.

Group of orthologs #1385. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KE79              	100.00%		H3BH31              	100.00%
Bootstrap support for Q5KE79 as seed ortholog is 100%.
Bootstrap support for H3BH31 as seed ortholog is 100%.

Group of orthologs #1386. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KD76              	100.00%		M3XJJ1              	100.00%
Bootstrap support for Q5KD76 as seed ortholog is 100%.
Bootstrap support for M3XJJ1 as seed ortholog is 100%.

Group of orthologs #1387. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 L.chalumnae:151

Q5KCK4              	100.00%		M3XKK5              	100.00%
Bootstrap support for Q5KCK4 as seed ortholog is 100%.
Bootstrap support for M3XKK5 as seed ortholog is 100%.

Group of orthologs #1388. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:59

Q5KES1              	100.00%		H2ZS94              	100.00%
                    	       		H3ATC7              	25.55%
Bootstrap support for Q5KES1 as seed ortholog is 91%.
Bootstrap support for H2ZS94 as seed ortholog is 89%.

Group of orthologs #1389. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 L.chalumnae:150

P0CN12              	100.00%		H3AT96              	100.00%
Bootstrap support for P0CN12 as seed ortholog is 100%.
Bootstrap support for H3AT96 as seed ortholog is 100%.

Group of orthologs #1390. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 L.chalumnae:150

Q5KGS7              	100.00%		H3AJ60              	100.00%
Bootstrap support for Q5KGS7 as seed ortholog is 100%.
Bootstrap support for H3AJ60 as seed ortholog is 100%.

Group of orthologs #1391. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:77 L.chalumnae:71

Q5KKM7              	100.00%		H3AR96              	100.00%
Bootstrap support for Q5KKM7 as seed ortholog is 91%.
Bootstrap support for H3AR96 as seed ortholog is 78%.

Group of orthologs #1392. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:91

Q5KAK0              	100.00%		H3A233              	100.00%
                    	       		H3B6Q1              	8.72%
Bootstrap support for Q5KAK0 as seed ortholog is 94%.
Bootstrap support for H3A233 as seed ortholog is 99%.

Group of orthologs #1393. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:58

Q5KD55              	100.00%		H3AY94              	100.00%
                    	       		M3XH90              	56.47%
Bootstrap support for Q5KD55 as seed ortholog is 94%.
Bootstrap support for H3AY94 as seed ortholog is 93%.

Group of orthologs #1394. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:38 L.chalumnae:149

Q5KCB7              	100.00%		H2ZTZ7              	100.00%
Bootstrap support for Q5KCB7 as seed ortholog is 86%.
Bootstrap support for H2ZTZ7 as seed ortholog is 100%.

Group of orthologs #1395. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 L.chalumnae:149

P0CN80              	100.00%		H3A9L3              	100.00%
Bootstrap support for P0CN80 as seed ortholog is 100%.
Bootstrap support for H3A9L3 as seed ortholog is 100%.

Group of orthologs #1396. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 L.chalumnae:39

P0CP96              	100.00%		H3B1A8              	100.00%
Bootstrap support for P0CP96 as seed ortholog is 100%.
Bootstrap support for H3B1A8 as seed ortholog is 93%.

Group of orthologs #1397. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 L.chalumnae:149

Q5KLS8              	100.00%		H3AQK0              	100.00%
Bootstrap support for Q5KLS8 as seed ortholog is 100%.
Bootstrap support for H3AQK0 as seed ortholog is 100%.

Group of orthologs #1398. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 L.chalumnae:149

Q5KJL6              	100.00%		H3B183              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for H3B183 as seed ortholog is 100%.

Group of orthologs #1399. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 L.chalumnae:148

Q5KFL1              	100.00%		H3A2M5              	100.00%
                    	       		H3BE55              	52.87%
                    	       		H3AFS9              	52.65%
                    	       		H3AQP5              	52.43%
                    	       		H3A2Y8              	46.80%
Bootstrap support for Q5KFL1 as seed ortholog is 100%.
Bootstrap support for H3A2M5 as seed ortholog is 100%.

Group of orthologs #1400. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:42 L.chalumnae:78

Q5KNG9              	100.00%		H3A967              	100.00%
                    	       		H3A1A2              	30.34%
                    	       		H3AZQ9              	20.00%
                    	       		H2ZW17              	10.57%
Bootstrap support for Q5KNG9 as seed ortholog is 86%.
Bootstrap support for H3A967 as seed ortholog is 97%.

Group of orthologs #1401. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 L.chalumnae:148

Q5KP23              	100.00%		H3B5D3              	100.00%
                    	       		H2ZX22              	38.37%
Bootstrap support for Q5KP23 as seed ortholog is 100%.
Bootstrap support for H3B5D3 as seed ortholog is 100%.

Group of orthologs #1402. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 L.chalumnae:148

Q5K864              	100.00%		H2ZTB8              	100.00%
Bootstrap support for Q5K864 as seed ortholog is 100%.
Bootstrap support for H2ZTB8 as seed ortholog is 100%.

Group of orthologs #1403. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 L.chalumnae:148

Q5KCP3              	100.00%		H3AVH6              	100.00%
Bootstrap support for Q5KCP3 as seed ortholog is 100%.
Bootstrap support for H3AVH6 as seed ortholog is 100%.

Group of orthologs #1404. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 L.chalumnae:148

P0CN62              	100.00%		H3B9T0              	100.00%
Bootstrap support for P0CN62 as seed ortholog is 100%.
Bootstrap support for H3B9T0 as seed ortholog is 100%.

Group of orthologs #1405. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:147

Q5KNC7              	100.00%		H2ZV61              	100.00%
                    	       		H3A836              	40.43%
Bootstrap support for Q5KNC7 as seed ortholog is 100%.
Bootstrap support for H2ZV61 as seed ortholog is 100%.

Group of orthologs #1406. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:31 L.chalumnae:147

P0CR78              	100.00%		H3AWG8              	100.00%
                    	       		H3ATT1              	44.75%
Bootstrap support for P0CR78 as seed ortholog is 93%.
Bootstrap support for H3AWG8 as seed ortholog is 100%.

Group of orthologs #1407. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:36 L.chalumnae:47

Q5KG67              	100.00%		H3APN9              	100.00%
                    	       		H3B6I1              	33.58%
Bootstrap support for Q5KG67 as seed ortholog is 80%.
Bootstrap support for H3APN9 as seed ortholog is 90%.

Group of orthologs #1408. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:147

Q5KJP0              	100.00%		H2ZYI2              	100.00%
Bootstrap support for Q5KJP0 as seed ortholog is 100%.
Bootstrap support for H2ZYI2 as seed ortholog is 100%.

Group of orthologs #1409. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:54

Q5KM35              	100.00%		H3A7T4              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 100%.
Bootstrap support for H3A7T4 as seed ortholog is 99%.

Group of orthologs #1410. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:147

Q5KBE4              	100.00%		H3AQQ9              	100.00%
Bootstrap support for Q5KBE4 as seed ortholog is 100%.
Bootstrap support for H3AQQ9 as seed ortholog is 100%.

Group of orthologs #1411. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:147

Q5KBB3              	100.00%		H3AWY5              	100.00%
Bootstrap support for Q5KBB3 as seed ortholog is 100%.
Bootstrap support for H3AWY5 as seed ortholog is 100%.

Group of orthologs #1412. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:103

Q5KGY1              	100.00%		H3AW58              	100.00%
Bootstrap support for Q5KGY1 as seed ortholog is 100%.
Bootstrap support for H3AW58 as seed ortholog is 99%.

Group of orthologs #1413. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 L.chalumnae:147

Q5K7U3              	100.00%		H3B9E4              	100.00%
Bootstrap support for Q5K7U3 as seed ortholog is 100%.
Bootstrap support for H3B9E4 as seed ortholog is 100%.

Group of orthologs #1414. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:18 L.chalumnae:45

Q5KKM2              	100.00%		H3B665              	100.00%
Bootstrap support for Q5KKM2 as seed ortholog is 69%.
Alternative seed ortholog is Q5KGS0 (18 bits away from this cluster)
Bootstrap support for H3B665 as seed ortholog is 87%.

Group of orthologs #1415. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KGR3              	100.00%		H3A2D5              	100.00%
                    	       		H3A5M5              	100.00%
                    	       		H3ABR6              	37.96%
                    	       		H3A9J9              	31.48%
Bootstrap support for Q5KGR3 as seed ortholog is 100%.
Bootstrap support for H3A2D5 as seed ortholog is 100%.
Bootstrap support for H3A5M5 as seed ortholog is 100%.

Group of orthologs #1416. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KG49              	100.00%		H3BBH1              	100.00%
Q5KG50              	34.81%		H3A5J3              	34.58%
                    	       		H2ZZB8              	12.98%
Bootstrap support for Q5KG49 as seed ortholog is 100%.
Bootstrap support for H3BBH1 as seed ortholog is 100%.

Group of orthologs #1417. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KB67              	100.00%		H2ZYK6              	100.00%
Bootstrap support for Q5KB67 as seed ortholog is 100%.
Bootstrap support for H2ZYK6 as seed ortholog is 100%.

Group of orthologs #1418. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KIA1              	100.00%		H3A7F4              	100.00%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for H3A7F4 as seed ortholog is 100%.

Group of orthologs #1419. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KIC8              	100.00%		H3A886              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for H3A886 as seed ortholog is 100%.

Group of orthologs #1420. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KM44              	100.00%		H3A6P0              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for H3A6P0 as seed ortholog is 100%.

Group of orthologs #1421. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5K7J1              	100.00%		H3AUB6              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for H3AUB6 as seed ortholog is 100%.

Group of orthologs #1422. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KA81              	100.00%		H3ATN5              	100.00%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for H3ATN5 as seed ortholog is 100%.

Group of orthologs #1423. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

P0CN00              	100.00%		H3B3S2              	100.00%
Bootstrap support for P0CN00 as seed ortholog is 100%.
Bootstrap support for H3B3S2 as seed ortholog is 100%.

Group of orthologs #1424. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KPM8              	100.00%		H3ALY6              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for H3ALY6 as seed ortholog is 100%.

Group of orthologs #1425. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KPF3              	100.00%		H3AUG1              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for H3AUG1 as seed ortholog is 100%.

Group of orthologs #1426. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:146

Q5KGK3              	100.00%		H3B9L6              	100.00%
Bootstrap support for Q5KGK3 as seed ortholog is 100%.
Bootstrap support for H3B9L6 as seed ortholog is 100%.

Group of orthologs #1427. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 L.chalumnae:6

Q5KKR2              	100.00%		H3BBU3              	100.00%
Bootstrap support for Q5KKR2 as seed ortholog is 100%.
Bootstrap support for H3BBU3 as seed ortholog is 86%.

Group of orthologs #1428. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:145

Q5KMC2              	100.00%		H3A116              	100.00%
                    	       		H3BEW6              	38.55%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for H3A116 as seed ortholog is 100%.

Group of orthologs #1429. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:145

Q5KLY7              	100.00%		H3BBF5              	100.00%
                    	       		H3BBT6              	57.63%
Bootstrap support for Q5KLY7 as seed ortholog is 100%.
Bootstrap support for H3BBF5 as seed ortholog is 100%.

Group of orthologs #1430. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:61

Q5K9C2              	100.00%		H3AL49              	100.00%
Bootstrap support for Q5K9C2 as seed ortholog is 100%.
Bootstrap support for H3AL49 as seed ortholog is 91%.

Group of orthologs #1431. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:145

Q5KNT0              	100.00%		H3AAY2              	100.00%
Bootstrap support for Q5KNT0 as seed ortholog is 100%.
Bootstrap support for H3AAY2 as seed ortholog is 100%.

Group of orthologs #1432. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:145

Q5KKM0              	100.00%		H3ANZ6              	100.00%
Bootstrap support for Q5KKM0 as seed ortholog is 100%.
Bootstrap support for H3ANZ6 as seed ortholog is 100%.

Group of orthologs #1433. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:145

Q5K8I0              	100.00%		H3B5X8              	100.00%
Bootstrap support for Q5K8I0 as seed ortholog is 100%.
Bootstrap support for H3B5X8 as seed ortholog is 100%.

Group of orthologs #1434. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 L.chalumnae:145

Q5KN73              	100.00%		M3XJ75              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for M3XJ75 as seed ortholog is 100%.

Group of orthologs #1435. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KFA1              	100.00%		H3A825              	100.00%
                    	       		H3BGD2              	65.45%
Bootstrap support for Q5KFA1 as seed ortholog is 100%.
Bootstrap support for H3A825 as seed ortholog is 100%.

Group of orthologs #1436. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KIH9              	100.00%		H3B884              	100.00%
                    	       		H3AJD1              	33.14%
Bootstrap support for Q5KIH9 as seed ortholog is 100%.
Bootstrap support for H3B884 as seed ortholog is 100%.

Group of orthologs #1437. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:83

Q5KFR2              	100.00%		H3BEJ8              	100.00%
                    	       		H3AZS8              	12.35%
Bootstrap support for Q5KFR2 as seed ortholog is 100%.
Bootstrap support for H3BEJ8 as seed ortholog is 99%.

Group of orthologs #1438. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KDF1              	100.00%		H2ZWM6              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for H2ZWM6 as seed ortholog is 100%.

Group of orthologs #1439. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:7

P0CO54              	100.00%		H3ADN4              	100.00%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for H3ADN4 as seed ortholog is 69%.
Alternative seed ortholog is H3A3U4 (7 bits away from this cluster)

Group of orthologs #1440. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KMX2              	100.00%		H2ZXR7              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 100%.
Bootstrap support for H2ZXR7 as seed ortholog is 100%.

Group of orthologs #1441. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KBX8              	100.00%		H3AD45              	100.00%
Bootstrap support for Q5KBX8 as seed ortholog is 100%.
Bootstrap support for H3AD45 as seed ortholog is 100%.

Group of orthologs #1442. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5K7S4              	100.00%		H3AL79              	100.00%
Bootstrap support for Q5K7S4 as seed ortholog is 100%.
Bootstrap support for H3AL79 as seed ortholog is 100%.

Group of orthologs #1443. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KIK2              	100.00%		H3AA97              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for H3AA97 as seed ortholog is 100%.

Group of orthologs #1444. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:32

Q5KCE0              	100.00%		H3AIF1              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for H3AIF1 as seed ortholog is 79%.

Group of orthologs #1445. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KCX5              	100.00%		H3AR89              	100.00%
Bootstrap support for Q5KCX5 as seed ortholog is 100%.
Bootstrap support for H3AR89 as seed ortholog is 100%.

Group of orthologs #1446. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KMC3              	100.00%		H3B6U6              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for H3B6U6 as seed ortholog is 100%.

Group of orthologs #1447. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 L.chalumnae:144

Q5KK01              	100.00%		H3BIP8              	100.00%
Bootstrap support for Q5KK01 as seed ortholog is 100%.
Bootstrap support for H3BIP8 as seed ortholog is 100%.

Group of orthologs #1448. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:101

Q5KP56              	100.00%		H3A8C7              	100.00%
                    	       		H3B6M5              	22.26%
Bootstrap support for Q5KP56 as seed ortholog is 100%.
Bootstrap support for H3A8C7 as seed ortholog is 98%.

Group of orthologs #1449. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:74

Q5KD44              	100.00%		H3BHY9              	100.00%
                    	       		M3XKV5              	59.87%
Bootstrap support for Q5KD44 as seed ortholog is 100%.
Bootstrap support for H3BHY9 as seed ortholog is 99%.

Group of orthologs #1450. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:143

P0CP72              	100.00%		H3AL27              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for H3AL27 as seed ortholog is 100%.

Group of orthologs #1451. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:143

Q5KG23              	100.00%		H3ABA0              	100.00%
Bootstrap support for Q5KG23 as seed ortholog is 100%.
Bootstrap support for H3ABA0 as seed ortholog is 100%.

Group of orthologs #1452. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:143

Q5K979              	100.00%		H3ATQ3              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for H3ATQ3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:143

Q5KC88              	100.00%		H3AQW3              	100.00%
Bootstrap support for Q5KC88 as seed ortholog is 100%.
Bootstrap support for H3AQW3 as seed ortholog is 100%.

Group of orthologs #1454. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:43

Q5K9G6              	100.00%		H3AY74              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for H3AY74 as seed ortholog is 95%.

Group of orthologs #1455. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:143

Q5KF53              	100.00%		H3AVR8              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for H3AVR8 as seed ortholog is 100%.

Group of orthologs #1456. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:72

Q5KBJ3              	100.00%		H3B8Z1              	100.00%
Bootstrap support for Q5KBJ3 as seed ortholog is 100%.
Bootstrap support for H3B8Z1 as seed ortholog is 94%.

Group of orthologs #1457. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 L.chalumnae:143

Q5KPP8              	100.00%		H3AXY5              	100.00%
Bootstrap support for Q5KPP8 as seed ortholog is 100%.
Bootstrap support for H3AXY5 as seed ortholog is 100%.

Group of orthologs #1458. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 L.chalumnae:56

Q5KCA8              	100.00%		H3AV13              	100.00%
                    	       		H2ZW63              	67.91%
                    	       		H3BE56              	61.86%
Bootstrap support for Q5KCA8 as seed ortholog is 100%.
Bootstrap support for H3AV13 as seed ortholog is 97%.

Group of orthologs #1459. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 L.chalumnae:142

P0CL96              	100.00%		H2ZTI6              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 100%.
Bootstrap support for H2ZTI6 as seed ortholog is 100%.

Group of orthologs #1460. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 L.chalumnae:142

Q5KJB4              	100.00%		H3AAC1              	100.00%
Bootstrap support for Q5KJB4 as seed ortholog is 100%.
Bootstrap support for H3AAC1 as seed ortholog is 100%.

Group of orthologs #1461. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:40 L.chalumnae:142

Q5KJ65              	100.00%		H3ADQ1              	100.00%
Bootstrap support for Q5KJ65 as seed ortholog is 93%.
Bootstrap support for H3ADQ1 as seed ortholog is 100%.

Group of orthologs #1462. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 L.chalumnae:142

Q5KPB0              	100.00%		H3AEF1              	100.00%
Bootstrap support for Q5KPB0 as seed ortholog is 100%.
Bootstrap support for H3AEF1 as seed ortholog is 100%.

Group of orthologs #1463. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 L.chalumnae:142

Q5KJ91              	100.00%		H3B3P9              	100.00%
Bootstrap support for Q5KJ91 as seed ortholog is 100%.
Bootstrap support for H3B3P9 as seed ortholog is 100%.

Group of orthologs #1464. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:141

Q5KNZ5              	100.00%		H3AFP3              	100.00%
                    	       		H3A248              	9.79%
                    	       		H2ZSH6              	9.43%
                    	       		H2ZTP8              	8.01%
                    	       		H3A8Z3              	5.16%
Bootstrap support for Q5KNZ5 as seed ortholog is 100%.
Bootstrap support for H3AFP3 as seed ortholog is 100%.

Group of orthologs #1465. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:141

Q5K7D5              	100.00%		H3AFC4              	100.00%
                    	       		H3BE43              	49.36%
Bootstrap support for Q5K7D5 as seed ortholog is 100%.
Bootstrap support for H3AFC4 as seed ortholog is 100%.

Group of orthologs #1466. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:30

P0CP94              	100.00%		H3ART8              	100.00%
Bootstrap support for P0CP94 as seed ortholog is 100%.
Bootstrap support for H3ART8 as seed ortholog is 97%.

Group of orthologs #1467. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:141

Q5KNE0              	100.00%		H3B0N0              	100.00%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for H3B0N0 as seed ortholog is 100%.

Group of orthologs #1468. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:141

Q5KKG8              	100.00%		H3B4X7              	100.00%
Bootstrap support for Q5KKG8 as seed ortholog is 100%.
Bootstrap support for H3B4X7 as seed ortholog is 100%.

Group of orthologs #1469. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:141

Q5KBI4              	100.00%		M3XGK0              	100.00%
Bootstrap support for Q5KBI4 as seed ortholog is 100%.
Bootstrap support for M3XGK0 as seed ortholog is 100%.

Group of orthologs #1470. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 L.chalumnae:141

Q5KFS7              	100.00%		M3XKD0              	100.00%
Bootstrap support for Q5KFS7 as seed ortholog is 100%.
Bootstrap support for M3XKD0 as seed ortholog is 100%.

Group of orthologs #1471. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:140

Q5KLE1              	100.00%		H3ATU4              	100.00%
                    	       		H3AUW9              	56.75%
Bootstrap support for Q5KLE1 as seed ortholog is 100%.
Bootstrap support for H3ATU4 as seed ortholog is 100%.

Group of orthologs #1472. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:140

Q5K7E8              	100.00%		H3A4I9              	100.00%
Bootstrap support for Q5K7E8 as seed ortholog is 100%.
Bootstrap support for H3A4I9 as seed ortholog is 100%.

Group of orthologs #1473. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:140

Q5KBW1              	100.00%		H3A1B2              	100.00%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for H3A1B2 as seed ortholog is 100%.

Group of orthologs #1474. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:140

Q5KFU2              	100.00%		H3A0K1              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 99%.
Bootstrap support for H3A0K1 as seed ortholog is 100%.

Group of orthologs #1475. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:140

Q5K9B4              	100.00%		H3B438              	100.00%
Bootstrap support for Q5K9B4 as seed ortholog is 100%.
Bootstrap support for H3B438 as seed ortholog is 100%.

Group of orthologs #1476. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:140

Q5KI55              	100.00%		H3B0P6              	100.00%
Bootstrap support for Q5KI55 as seed ortholog is 100%.
Bootstrap support for H3B0P6 as seed ortholog is 100%.

Group of orthologs #1477. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 L.chalumnae:140

Q5KA59              	100.00%		H3BDI6              	100.00%
Bootstrap support for Q5KA59 as seed ortholog is 100%.
Bootstrap support for H3BDI6 as seed ortholog is 100%.

Group of orthologs #1478. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:65

Q5KJT6              	100.00%		H3B721              	100.00%
Bootstrap support for Q5KJT6 as seed ortholog is 95%.
Bootstrap support for H3B721 as seed ortholog is 95%.

Group of orthologs #1479. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:71

Q5KM13              	100.00%		H3A4A5              	100.00%
                    	       		H3ACI2              	11.80%
                    	       		H3A870              	8.20%
Bootstrap support for Q5KM13 as seed ortholog is 100%.
Bootstrap support for H3A4A5 as seed ortholog is 99%.

Group of orthologs #1480. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:22 L.chalumnae:139

Q5KFZ5              	100.00%		H3B0J0              	100.00%
Q5KE95              	9.96%		H3BDK4              	100.00%
Bootstrap support for Q5KFZ5 as seed ortholog is 76%.
Bootstrap support for H3B0J0 as seed ortholog is 100%.
Bootstrap support for H3BDK4 as seed ortholog is 100%.

Group of orthologs #1481. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:139

Q5KDT5              	100.00%		H3APQ0              	100.00%
                    	       		H3AWP5              	22.48%
Bootstrap support for Q5KDT5 as seed ortholog is 100%.
Bootstrap support for H3APQ0 as seed ortholog is 100%.

Group of orthologs #1482. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:91

P0CS40              	100.00%		H2ZRM7              	100.00%
Bootstrap support for P0CS40 as seed ortholog is 100%.
Bootstrap support for H2ZRM7 as seed ortholog is 99%.

Group of orthologs #1483. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:139

Q5KH20              	100.00%		H3AK71              	100.00%
Bootstrap support for Q5KH20 as seed ortholog is 100%.
Bootstrap support for H3AK71 as seed ortholog is 100%.

Group of orthologs #1484. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:74

Q5KQ08              	100.00%		H3B5N4              	100.00%
Bootstrap support for Q5KQ08 as seed ortholog is 100%.
Bootstrap support for H3B5N4 as seed ortholog is 97%.

Group of orthologs #1485. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 L.chalumnae:139

Q5KPS6              	100.00%		M3XI18              	100.00%
Bootstrap support for Q5KPS6 as seed ortholog is 100%.
Bootstrap support for M3XI18 as seed ortholog is 100%.

Group of orthologs #1486. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:33

Q5KCM4              	100.00%		H3A4L0              	100.00%
                    	       		I6L4N4              	31.71%
                    	       		M3XIA1              	26.36%
Bootstrap support for Q5KCM4 as seed ortholog is 100%.
Bootstrap support for H3A4L0 as seed ortholog is 90%.

Group of orthologs #1487. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:138

Q5K6U7              	100.00%		H3AB84              	100.00%
                    	       		H3A446              	30.76%
Bootstrap support for Q5K6U7 as seed ortholog is 100%.
Bootstrap support for H3AB84 as seed ortholog is 100%.

Group of orthologs #1488. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:17

Q5KEP5              	100.00%		H3AYS1              	100.00%
                    	       		H2ZU08              	59.34%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for H3AYS1 as seed ortholog is 69%.
Alternative seed ortholog is H3A8F1 (17 bits away from this cluster)

Group of orthologs #1489. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:138

P0CQ26              	100.00%		H3B311              	100.00%
Bootstrap support for P0CQ26 as seed ortholog is 100%.
Bootstrap support for H3B311 as seed ortholog is 100%.

Group of orthologs #1490. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:138

Q5K9C8              	100.00%		H3B0K7              	100.00%
Bootstrap support for Q5K9C8 as seed ortholog is 100%.
Bootstrap support for H3B0K7 as seed ortholog is 100%.

Group of orthologs #1491. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 L.chalumnae:138

Q5KDG6              	100.00%		H3B7Z2              	100.00%
Bootstrap support for Q5KDG6 as seed ortholog is 100%.
Bootstrap support for H3B7Z2 as seed ortholog is 100%.

Group of orthologs #1492. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 L.chalumnae:31

Q5KLM4              	100.00%		H3A818              	100.00%
                    	       		H3B1W9              	31.98%
                    	       		H2ZUI9              	30.88%
Bootstrap support for Q5KLM4 as seed ortholog is 100%.
Bootstrap support for H3A818 as seed ortholog is 85%.

Group of orthologs #1493. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 L.chalumnae:137

Q5KFS4              	100.00%		H3AJE5              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for H3AJE5 as seed ortholog is 100%.

Group of orthologs #1494. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 L.chalumnae:137

Q5K9S4              	100.00%		H3AVV5              	100.00%
Bootstrap support for Q5K9S4 as seed ortholog is 100%.
Bootstrap support for H3AVV5 as seed ortholog is 100%.

Group of orthologs #1495. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 L.chalumnae:137

Q5KAE9              	100.00%		H3B886              	100.00%
Bootstrap support for Q5KAE9 as seed ortholog is 100%.
Bootstrap support for H3B886 as seed ortholog is 100%.

Group of orthologs #1496. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:11

Q5KFL4              	100.00%		H3B188              	100.00%
                    	       		H3ACM5              	32.62%
                    	       		H3BBZ2              	21.95%
Bootstrap support for Q5KFL4 as seed ortholog is 100%.
Bootstrap support for H3B188 as seed ortholog is 66%.
Alternative seed ortholog is H3BGU0 (11 bits away from this cluster)

Group of orthologs #1497. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:10

Q5KDD8              	100.00%		H3B3U0              	100.00%
                    	       		H3B3F2              	21.74%
Bootstrap support for Q5KDD8 as seed ortholog is 100%.
Bootstrap support for H3B3U0 as seed ortholog is 59%.
Alternative seed ortholog is M3XKG1 (10 bits away from this cluster)

Group of orthologs #1498. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:18

Q5KFL8              	100.00%		H3B7K5              	100.00%
Q5KLI6              	6.71%		
Bootstrap support for Q5KFL8 as seed ortholog is 100%.
Bootstrap support for H3B7K5 as seed ortholog is 60%.
Alternative seed ortholog is M3XK02 (18 bits away from this cluster)

Group of orthologs #1499. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

Q5KEC8              	100.00%		H3BEG5              	100.00%
                    	       		M3XI53              	44.69%
Bootstrap support for Q5KEC8 as seed ortholog is 100%.
Bootstrap support for H3BEG5 as seed ortholog is 100%.

Group of orthologs #1500. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

P0CP62              	100.00%		H3AJF5              	100.00%
Bootstrap support for P0CP62 as seed ortholog is 100%.
Bootstrap support for H3AJF5 as seed ortholog is 100%.

Group of orthologs #1501. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

Q5K889              	100.00%		H3AS08              	100.00%
Bootstrap support for Q5K889 as seed ortholog is 100%.
Bootstrap support for H3AS08 as seed ortholog is 100%.

Group of orthologs #1502. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

Q5KCV9              	100.00%		H3ARI4              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for H3ARI4 as seed ortholog is 100%.

Group of orthologs #1503. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

P0CO56              	100.00%		H3AZ11              	100.00%
Bootstrap support for P0CO56 as seed ortholog is 100%.
Bootstrap support for H3AZ11 as seed ortholog is 100%.

Group of orthologs #1504. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

Q5KI23              	100.00%		H3AWQ0              	100.00%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for H3AWQ0 as seed ortholog is 100%.

Group of orthologs #1505. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 L.chalumnae:136

Q5KME4              	100.00%		H3AYZ5              	100.00%
Bootstrap support for Q5KME4 as seed ortholog is 100%.
Bootstrap support for H3AYZ5 as seed ortholog is 100%.

Group of orthologs #1506. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:69

Q5KDH4              	100.00%		H3BG66              	100.00%
Bootstrap support for Q5KDH4 as seed ortholog is 96%.
Bootstrap support for H3BG66 as seed ortholog is 97%.

Group of orthologs #1507. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:135

P0CN58              	100.00%		H2ZVD9              	100.00%
                    	       		H3A4Y8              	42.61%
Bootstrap support for P0CN58 as seed ortholog is 100%.
Bootstrap support for H2ZVD9 as seed ortholog is 100%.

Group of orthologs #1508. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:135

Q5KCU3              	100.00%		H3BAA6              	100.00%
                    	       		H3A8E5              	48.74%
Bootstrap support for Q5KCU3 as seed ortholog is 100%.
Bootstrap support for H3BAA6 as seed ortholog is 100%.

Group of orthologs #1509. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:25

Q5K9M8              	100.00%		H2ZWY8              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for H2ZWY8 as seed ortholog is 90%.

Group of orthologs #1510. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:135

Q5KC44              	100.00%		H3AMD3              	100.00%
Bootstrap support for Q5KC44 as seed ortholog is 100%.
Bootstrap support for H3AMD3 as seed ortholog is 100%.

Group of orthologs #1511. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:135

Q5KMP8              	100.00%		H3AKL5              	100.00%
Bootstrap support for Q5KMP8 as seed ortholog is 100%.
Bootstrap support for H3AKL5 as seed ortholog is 100%.

Group of orthologs #1512. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 L.chalumnae:85

Q5KEF1              	100.00%		H3B418              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 100%.
Bootstrap support for H3B418 as seed ortholog is 99%.

Group of orthologs #1513. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:135

Q5KPP2              	100.00%		M3XKL4              	100.00%
Bootstrap support for Q5KPP2 as seed ortholog is 98%.
Bootstrap support for M3XKL4 as seed ortholog is 100%.

Group of orthologs #1514. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5KDV9              	100.00%		H3A7Z2              	100.00%
                    	       		H3AGF9              	42.66%
                    	       		H3A362              	7.69%
Bootstrap support for Q5KDV9 as seed ortholog is 100%.
Bootstrap support for H3A7Z2 as seed ortholog is 100%.

Group of orthologs #1515. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5KL83              	100.00%		H2ZW84              	100.00%
                    	       		H3APW1              	7.71%
Bootstrap support for Q5KL83 as seed ortholog is 100%.
Bootstrap support for H2ZW84 as seed ortholog is 100%.

Group of orthologs #1516. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:66

Q5KIM4              	100.00%		H3ARN1              	100.00%
                    	       		H3AP32              	41.76%
Bootstrap support for Q5KIM4 as seed ortholog is 100%.
Bootstrap support for H3ARN1 as seed ortholog is 79%.

Group of orthologs #1517. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5KBQ4              	100.00%		H3A449              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for H3A449 as seed ortholog is 100%.

Group of orthologs #1518. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5KDK1              	100.00%		H3A5Z3              	100.00%
Bootstrap support for Q5KDK1 as seed ortholog is 100%.
Bootstrap support for H3A5Z3 as seed ortholog is 100%.

Group of orthologs #1519. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5K8J3              	100.00%		H3ACH9              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for H3ACH9 as seed ortholog is 100%.

Group of orthologs #1520. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5KEI7              	100.00%		H3ANS1              	100.00%
Bootstrap support for Q5KEI7 as seed ortholog is 100%.
Bootstrap support for H3ANS1 as seed ortholog is 100%.

Group of orthologs #1521. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5K7T3              	100.00%		H3B1N7              	100.00%
Bootstrap support for Q5K7T3 as seed ortholog is 100%.
Bootstrap support for H3B1N7 as seed ortholog is 100%.

Group of orthologs #1522. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5K9F9              	100.00%		H3B568              	100.00%
Bootstrap support for Q5K9F9 as seed ortholog is 100%.
Bootstrap support for H3B568 as seed ortholog is 100%.

Group of orthologs #1523. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 L.chalumnae:134

Q5KNX7              	100.00%		H3BG30              	100.00%
Bootstrap support for Q5KNX7 as seed ortholog is 100%.
Bootstrap support for H3BG30 as seed ortholog is 100%.

Group of orthologs #1524. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:69 L.chalumnae:64

Q5K8L2              	100.00%		H3A5P5              	100.00%
                    	       		H3B270              	35.47%
                    	       		H2ZXJ7              	35.08%
                    	       		H3BEA6              	32.95%
                    	       		H3AJ74              	31.40%
                    	       		H3AXM0              	26.94%
                    	       		H2ZSJ0              	16.28%
                    	       		M3XI98              	9.50%
                    	       		I6L4Q1              	5.04%
Bootstrap support for Q5K8L2 as seed ortholog is 96%.
Bootstrap support for H3A5P5 as seed ortholog is 89%.

Group of orthologs #1525. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:133

Q5KJ00              	100.00%		H3ASE7              	100.00%
                    	       		H3B8V7              	62.27%
Bootstrap support for Q5KJ00 as seed ortholog is 100%.
Bootstrap support for H3ASE7 as seed ortholog is 100%.

Group of orthologs #1526. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:29 L.chalumnae:44

Q5KPK3              	100.00%		H3AZU0              	100.00%
                    	       		H3B4D7              	48.28%
Bootstrap support for Q5KPK3 as seed ortholog is 94%.
Bootstrap support for H3AZU0 as seed ortholog is 97%.

Group of orthologs #1527. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:133

Q5KHN0              	100.00%		H3B9P1              	100.00%
                    	       		H3BG33              	37.93%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for H3B9P1 as seed ortholog is 100%.

Group of orthologs #1528. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:25 L.chalumnae:20

Q5KMV5              	100.00%		H2ZSW2              	100.00%
Bootstrap support for Q5KMV5 as seed ortholog is 77%.
Bootstrap support for H2ZSW2 as seed ortholog is 71%.
Alternative seed ortholog is H3B6E9 (20 bits away from this cluster)

Group of orthologs #1529. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:133

Q5KL67              	100.00%		H2ZYM0              	100.00%
Bootstrap support for Q5KL67 as seed ortholog is 100%.
Bootstrap support for H2ZYM0 as seed ortholog is 100%.

Group of orthologs #1530. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:133

Q5KK88              	100.00%		H3A4B7              	100.00%
Bootstrap support for Q5KK88 as seed ortholog is 100%.
Bootstrap support for H3A4B7 as seed ortholog is 100%.

Group of orthologs #1531. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:133

Q5KLM7              	100.00%		H3AVF5              	100.00%
Bootstrap support for Q5KLM7 as seed ortholog is 100%.
Bootstrap support for H3AVF5 as seed ortholog is 100%.

Group of orthologs #1532. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 L.chalumnae:133

Q5KFU9              	100.00%		H3BFR2              	100.00%
Bootstrap support for Q5KFU9 as seed ortholog is 100%.
Bootstrap support for H3BFR2 as seed ortholog is 100%.

Group of orthologs #1533. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:133

Q5KPJ5              	100.00%		H3BDZ6              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 94%.
Bootstrap support for H3BDZ6 as seed ortholog is 100%.

Group of orthologs #1534. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

P0CP10              	100.00%		H3AZC2              	100.00%
                    	       		H2ZWE7              	22.50%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for H3AZC2 as seed ortholog is 100%.

Group of orthologs #1535. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KIN8              	100.00%		H2ZVH4              	100.00%
Bootstrap support for Q5KIN8 as seed ortholog is 100%.
Bootstrap support for H2ZVH4 as seed ortholog is 100%.

Group of orthologs #1536. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KFD2              	100.00%		H3AB03              	100.00%
Bootstrap support for Q5KFD2 as seed ortholog is 100%.
Bootstrap support for H3AB03 as seed ortholog is 100%.

Group of orthologs #1537. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KLU4              	100.00%		H3A5C4              	100.00%
Bootstrap support for Q5KLU4 as seed ortholog is 100%.
Bootstrap support for H3A5C4 as seed ortholog is 100%.

Group of orthologs #1538. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KPN8              	100.00%		H3ABM9              	100.00%
Bootstrap support for Q5KPN8 as seed ortholog is 100%.
Bootstrap support for H3ABM9 as seed ortholog is 100%.

Group of orthologs #1539. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KI01              	100.00%		H3AVG4              	100.00%
Bootstrap support for Q5KI01 as seed ortholog is 100%.
Bootstrap support for H3AVG4 as seed ortholog is 100%.

Group of orthologs #1540. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KNR2              	100.00%		H3B128              	100.00%
Bootstrap support for Q5KNR2 as seed ortholog is 100%.
Bootstrap support for H3B128 as seed ortholog is 100%.

Group of orthologs #1541. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 L.chalumnae:132

Q5KE04              	100.00%		H3BCJ0              	100.00%
Bootstrap support for Q5KE04 as seed ortholog is 100%.
Bootstrap support for H3BCJ0 as seed ortholog is 100%.

Group of orthologs #1542. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 L.chalumnae:131

Q5KMJ1              	100.00%		H2ZSY8              	100.00%
                    	       		H3AAA2              	40.60%
Bootstrap support for Q5KMJ1 as seed ortholog is 100%.
Bootstrap support for H2ZSY8 as seed ortholog is 100%.

Group of orthologs #1543. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 L.chalumnae:131

Q5KK70              	100.00%		H2ZWC2              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for H2ZWC2 as seed ortholog is 100%.

Group of orthologs #1544. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 L.chalumnae:131

Q5KMH2              	100.00%		H3ATH4              	100.00%
Bootstrap support for Q5KMH2 as seed ortholog is 100%.
Bootstrap support for H3ATH4 as seed ortholog is 100%.

Group of orthologs #1545. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 L.chalumnae:131

Q5KPA5              	100.00%		H3AT77              	100.00%
Bootstrap support for Q5KPA5 as seed ortholog is 100%.
Bootstrap support for H3AT77 as seed ortholog is 100%.

Group of orthologs #1546. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:131

Q5KFC3              	100.00%		H3B7I5              	100.00%
Bootstrap support for Q5KFC3 as seed ortholog is 80%.
Bootstrap support for H3B7I5 as seed ortholog is 100%.

Group of orthologs #1547. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:130

Q5KNU9              	100.00%		H2ZWR6              	100.00%
Q5KJC7              	100.00%		H3A574              	100.00%
Bootstrap support for Q5KNU9 as seed ortholog is 100%.
Bootstrap support for Q5KJC7 as seed ortholog is 100%.
Bootstrap support for H2ZWR6 as seed ortholog is 100%.
Bootstrap support for H3A574 as seed ortholog is 100%.

Group of orthologs #1548. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:130

Q5KL56              	100.00%		H3A0E0              	100.00%
                    	       		H3B4H4              	45.33%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for H3A0E0 as seed ortholog is 100%.

Group of orthologs #1549. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:41

P0CR62              	100.00%		H3B3N2              	100.00%
                    	       		H3AQ43              	30.43%
Bootstrap support for P0CR62 as seed ortholog is 100%.
Bootstrap support for H3B3N2 as seed ortholog is 82%.

Group of orthologs #1550. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:130

Q5KLK6              	100.00%		H3AU25              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for H3AU25 as seed ortholog is 100%.

Group of orthologs #1551. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:130

Q5KMI3              	100.00%		H3AYT9              	100.00%
Bootstrap support for Q5KMI3 as seed ortholog is 100%.
Bootstrap support for H3AYT9 as seed ortholog is 100%.

Group of orthologs #1552. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 L.chalumnae:80

Q5KLG7              	100.00%		H3B5S7              	100.00%
Bootstrap support for Q5KLG7 as seed ortholog is 100%.
Bootstrap support for H3B5S7 as seed ortholog is 100%.

Group of orthologs #1553. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:57

Q5KGI3              	100.00%		H3B7T7              	100.00%
                    	       		H3AR32              	89.43%
                    	       		H3A5V7              	26.87%
                    	       		H3AZT5              	24.23%
                    	       		H3BF30              	17.62%
                    	       		H3B6A5              	14.98%
                    	       		H2ZX82              	9.69%
Bootstrap support for Q5KGI3 as seed ortholog is 96%.
Bootstrap support for H3B7T7 as seed ortholog is 97%.

Group of orthologs #1554. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5K8Z0              	100.00%		M3XL51              	100.00%
                    	       		H3ALK7              	53.49%
                    	       		H3AD17              	28.82%
                    	       		M3XLD2              	19.00%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for M3XL51 as seed ortholog is 100%.

Group of orthologs #1555. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5K7A4              	100.00%		H3APM9              	100.00%
                    	       		H3AYK4              	38.17%
                    	       		H3AKR5              	33.20%
Bootstrap support for Q5K7A4 as seed ortholog is 100%.
Bootstrap support for H3APM9 as seed ortholog is 100%.

Group of orthologs #1556. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5K9D0              	100.00%		H3AV68              	100.00%
                    	       		H3A368              	37.34%
                    	       		H3AWA4              	25.83%
Bootstrap support for Q5K9D0 as seed ortholog is 100%.
Bootstrap support for H3AV68 as seed ortholog is 100%.

Group of orthologs #1557. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KF67              	100.00%		H3A4K5              	100.00%
                    	       		H3BDE1              	25.17%
Bootstrap support for Q5KF67 as seed ortholog is 100%.
Bootstrap support for H3A4K5 as seed ortholog is 100%.

Group of orthologs #1558. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

P0CN04              	100.00%		H3AGU1              	100.00%
                    	       		H2ZV63              	77.39%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for H3AGU1 as seed ortholog is 100%.

Group of orthologs #1559. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KCY0              	100.00%		H3A5B6              	100.00%
Bootstrap support for Q5KCY0 as seed ortholog is 100%.
Bootstrap support for H3A5B6 as seed ortholog is 100%.

Group of orthologs #1560. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KHF1              	100.00%		H3A124              	100.00%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for H3A124 as seed ortholog is 100%.

Group of orthologs #1561. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KEK7              	100.00%		H3A8K9              	100.00%
Bootstrap support for Q5KEK7 as seed ortholog is 100%.
Bootstrap support for H3A8K9 as seed ortholog is 100%.

Group of orthologs #1562. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5K9X5              	100.00%		H3B1B8              	100.00%
Bootstrap support for Q5K9X5 as seed ortholog is 100%.
Bootstrap support for H3B1B8 as seed ortholog is 100%.

Group of orthologs #1563. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5K9C9              	100.00%		H3B3A9              	100.00%
Bootstrap support for Q5K9C9 as seed ortholog is 100%.
Bootstrap support for H3B3A9 as seed ortholog is 100%.

Group of orthologs #1564. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KI17              	100.00%		H3AWV3              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for H3AWV3 as seed ortholog is 100%.

Group of orthologs #1565. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KQ14              	100.00%		H3ARZ6              	100.00%
Bootstrap support for Q5KQ14 as seed ortholog is 100%.
Bootstrap support for H3ARZ6 as seed ortholog is 100%.

Group of orthologs #1566. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 L.chalumnae:129

Q5KL46              	100.00%		H3B1V1              	100.00%
Bootstrap support for Q5KL46 as seed ortholog is 100%.
Bootstrap support for H3B1V1 as seed ortholog is 100%.

Group of orthologs #1567. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:7

Q5KP75              	100.00%		H3A994              	100.00%
                    	       		H3AV15              	56.08%
                    	       		H3AA87              	53.25%
                    	       		H3APA6              	44.53%
Bootstrap support for Q5KP75 as seed ortholog is 79%.
Bootstrap support for H3A994 as seed ortholog is 56%.
Alternative seed ortholog is H3B5J9 (7 bits away from this cluster)

Group of orthologs #1568. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5K8N6              	100.00%		H2ZVH2              	100.00%
                    	       		H3B3Y9              	6.87%
Bootstrap support for Q5K8N6 as seed ortholog is 100%.
Bootstrap support for H2ZVH2 as seed ortholog is 100%.

Group of orthologs #1569. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:39

P0CM54              	100.00%		H3AAV3              	100.00%
                    	       		M3XIP7              	40.70%
Bootstrap support for P0CM54 as seed ortholog is 100%.
Bootstrap support for H3AAV3 as seed ortholog is 94%.

Group of orthologs #1570. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5KHE4              	100.00%		H3AVF2              	100.00%
                    	       		H3AV94              	34.94%
Bootstrap support for Q5KHE4 as seed ortholog is 100%.
Bootstrap support for H3AVF2 as seed ortholog is 100%.

Group of orthologs #1571. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5KPS7              	100.00%		H3ATA4              	100.00%
                    	       		H3ATK9              	30.06%
Bootstrap support for Q5KPS7 as seed ortholog is 100%.
Bootstrap support for H3ATA4 as seed ortholog is 100%.

Group of orthologs #1572. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5KFI3              	100.00%		H3BCF9              	100.00%
                    	       		H3AS61              	5.51%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for H3BCF9 as seed ortholog is 100%.

Group of orthologs #1573. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5K8V4              	100.00%		H3A968              	100.00%
Bootstrap support for Q5K8V4 as seed ortholog is 100%.
Bootstrap support for H3A968 as seed ortholog is 100%.

Group of orthologs #1574. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:58

P0CQ06              	100.00%		H3ALS7              	100.00%
Bootstrap support for P0CQ06 as seed ortholog is 100%.
Bootstrap support for H3ALS7 as seed ortholog is 89%.

Group of orthologs #1575. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5KIG9              	100.00%		H3ASL8              	100.00%
Bootstrap support for Q5KIG9 as seed ortholog is 100%.
Bootstrap support for H3ASL8 as seed ortholog is 100%.

Group of orthologs #1576. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5KN70              	100.00%		H3B186              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 100%.
Bootstrap support for H3B186 as seed ortholog is 100%.

Group of orthologs #1577. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 L.chalumnae:128

Q5KDN1              	100.00%		H3BCD0              	100.00%
Bootstrap support for Q5KDN1 as seed ortholog is 100%.
Bootstrap support for H3BCD0 as seed ortholog is 100%.

Group of orthologs #1578. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 L.chalumnae:127

P0CN06              	100.00%		H3AMW2              	100.00%
                    	       		H3BFI8              	81.51%
                    	       		H3AC31              	9.73%
Bootstrap support for P0CN06 as seed ortholog is 100%.
Bootstrap support for H3AMW2 as seed ortholog is 100%.

Group of orthologs #1579. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 L.chalumnae:127

P0CQ62              	100.00%		H3A5W3              	100.00%
                    	       		H3AQ84              	47.07%
Bootstrap support for P0CQ62 as seed ortholog is 100%.
Bootstrap support for H3A5W3 as seed ortholog is 100%.

Group of orthologs #1580. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 L.chalumnae:127

Q5KNW5              	100.00%		H3ADP2              	100.00%
                    	       		M3XH93              	60.99%
Bootstrap support for Q5KNW5 as seed ortholog is 100%.
Bootstrap support for H3ADP2 as seed ortholog is 100%.

Group of orthologs #1581. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 L.chalumnae:64

P0CS10              	100.00%		H3A667              	100.00%
Bootstrap support for P0CS10 as seed ortholog is 100%.
Bootstrap support for H3A667 as seed ortholog is 95%.

Group of orthologs #1582. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:35 L.chalumnae:18

Q5KQ41              	100.00%		H3BC02              	100.00%
Bootstrap support for Q5KQ41 as seed ortholog is 91%.
Bootstrap support for H3BC02 as seed ortholog is 73%.
Alternative seed ortholog is H3AZX2 (18 bits away from this cluster)

Group of orthologs #1583. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 L.chalumnae:52

Q5KF95              	100.00%		H3AKF6              	100.00%
                    	       		H3B324              	23.60%
Bootstrap support for Q5KF95 as seed ortholog is 100%.
Bootstrap support for H3AKF6 as seed ortholog is 98%.

Group of orthologs #1584. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 L.chalumnae:126

Q5K7I7              	100.00%		H3A6I2              	100.00%
Bootstrap support for Q5K7I7 as seed ortholog is 100%.
Bootstrap support for H3A6I2 as seed ortholog is 100%.

Group of orthologs #1585. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 L.chalumnae:126

Q5KFB3              	100.00%		H3B0T9              	100.00%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for H3B0T9 as seed ortholog is 100%.

Group of orthologs #1586. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 L.chalumnae:126

Q5KGC2              	100.00%		H3BB44              	100.00%
Bootstrap support for Q5KGC2 as seed ortholog is 100%.
Bootstrap support for H3BB44 as seed ortholog is 100%.

Group of orthologs #1587. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:125

Q5K7J2              	100.00%		H3BCU6              	100.00%
                    	       		H3B8R9              	52.46%
                    	       		M3XHI2              	38.46%
                    	       		H3AS22              	17.83%
Bootstrap support for Q5K7J2 as seed ortholog is 100%.
Bootstrap support for H3BCU6 as seed ortholog is 100%.

Group of orthologs #1588. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:35

Q5KBU2              	100.00%		H3BGS1              	100.00%
                    	       		H3AJ50              	50.91%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for H3BGS1 as seed ortholog is 77%.

Group of orthologs #1589. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:125

Q5K802              	100.00%		H3ACX7              	100.00%
Bootstrap support for Q5K802 as seed ortholog is 100%.
Bootstrap support for H3ACX7 as seed ortholog is 100%.

Group of orthologs #1590. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:125

Q5KEY6              	100.00%		H3ALW7              	100.00%
Bootstrap support for Q5KEY6 as seed ortholog is 100%.
Bootstrap support for H3ALW7 as seed ortholog is 100%.

Group of orthologs #1591. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:38

Q5K8Z1              	100.00%		H3B100              	100.00%
Bootstrap support for Q5K8Z1 as seed ortholog is 100%.
Bootstrap support for H3B100 as seed ortholog is 85%.

Group of orthologs #1592. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:125

Q5KDN0              	100.00%		H3B4R0              	100.00%
Bootstrap support for Q5KDN0 as seed ortholog is 100%.
Bootstrap support for H3B4R0 as seed ortholog is 100%.

Group of orthologs #1593. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 L.chalumnae:125

Q5KLB0              	100.00%		H3B6X7              	100.00%
Bootstrap support for Q5KLB0 as seed ortholog is 100%.
Bootstrap support for H3B6X7 as seed ortholog is 100%.

Group of orthologs #1594. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5K9B3              	100.00%		H3AJT5              	100.00%
                    	       		H3BHB1              	31.80%
                    	       		M3XJB5              	10.65%
                    	       		H3ATL2              	10.06%
                    	       		M3XJT7              	5.33%
Bootstrap support for Q5K9B3 as seed ortholog is 100%.
Bootstrap support for H3AJT5 as seed ortholog is 100%.

Group of orthologs #1595. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:41

Q5KK79              	100.00%		H3B9P8              	100.00%
                    	       		H2ZU71              	20.49%
                    	       		H3AW06              	18.71%
                    	       		H3ADG2              	17.18%
Bootstrap support for Q5KK79 as seed ortholog is 80%.
Bootstrap support for H3B9P8 as seed ortholog is 85%.

Group of orthologs #1596. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:54

Q5KA03              	100.00%		H3API5              	100.00%
Q5KPE0              	100.00%		H3B2C2              	100.00%
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for Q5KPE0 as seed ortholog is 100%.
Bootstrap support for H3API5 as seed ortholog is 90%.
Bootstrap support for H3B2C2 as seed ortholog is 75%.

Group of orthologs #1597. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KDU6              	100.00%		H3AXL2              	100.00%
                    	       		H3AH26              	82.76%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for H3AXL2 as seed ortholog is 100%.

Group of orthologs #1598. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KJG2              	100.00%		H2ZTX1              	100.00%
Bootstrap support for Q5KJG2 as seed ortholog is 100%.
Bootstrap support for H2ZTX1 as seed ortholog is 100%.

Group of orthologs #1599. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KKK1              	100.00%		H2ZUP0              	100.00%
Bootstrap support for Q5KKK1 as seed ortholog is 100%.
Bootstrap support for H2ZUP0 as seed ortholog is 100%.

Group of orthologs #1600. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5K7B2              	100.00%		H3A9L9              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for H3A9L9 as seed ortholog is 100%.

Group of orthologs #1601. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KHF0              	100.00%		H2ZZH6              	100.00%
Bootstrap support for Q5KHF0 as seed ortholog is 100%.
Bootstrap support for H2ZZH6 as seed ortholog is 100%.

Group of orthologs #1602. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KDU5              	100.00%		H3A970              	100.00%
Bootstrap support for Q5KDU5 as seed ortholog is 100%.
Bootstrap support for H3A970 as seed ortholog is 100%.

Group of orthologs #1603. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KBV9              	100.00%		H3AJW8              	100.00%
Bootstrap support for Q5KBV9 as seed ortholog is 100%.
Bootstrap support for H3AJW8 as seed ortholog is 100%.

Group of orthologs #1604. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KL32              	100.00%		H3AD65              	100.00%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for H3AD65 as seed ortholog is 100%.

Group of orthologs #1605. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KDQ5              	100.00%		H3B9D1              	100.00%
Bootstrap support for Q5KDQ5 as seed ortholog is 100%.
Bootstrap support for H3B9D1 as seed ortholog is 100%.

Group of orthologs #1606. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KFY9              	100.00%		M3XK38              	100.00%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for M3XK38 as seed ortholog is 100%.

Group of orthologs #1607. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 L.chalumnae:124

Q5KL76              	100.00%		H3BIH8              	100.00%
Bootstrap support for Q5KL76 as seed ortholog is 100%.
Bootstrap support for H3BIH8 as seed ortholog is 100%.

Group of orthologs #1608. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 L.chalumnae:123

Q5KMN4              	100.00%		H3A4X5              	100.00%
                    	       		H3A4W1              	54.75%
                    	       		H3BGG4              	51.42%
                    	       		H3BG81              	51.32%
                    	       		H3A2D7              	50.83%
                    	       		H2ZX28              	48.87%
                    	       		H3B809              	45.84%
                    	       		H3BFQ1              	17.04%
                    	       		H3B663              	16.36%
                    	       		H3AQR6              	15.08%
                    	       		H3B1G3              	14.01%
                    	       		H2ZWY7              	11.26%
                    	       		H3B5S3              	11.26%
                    	       		H3AG12              	10.77%
                    	       		H3A5K6              	10.28%
                    	       		H3B0U9              	9.50%
                    	       		H3AE41              	9.21%
                    	       		H3APY9              	9.21%
                    	       		H3B4I1              	9.21%
                    	       		H3BGC7              	9.11%
                    	       		H3B9G6              	9.11%
                    	       		H3B6H6              	7.54%
                    	       		H3A524              	7.35%
                    	       		H3AHB9              	6.66%
                    	       		H3BCP8              	6.07%
Bootstrap support for Q5KMN4 as seed ortholog is 100%.
Bootstrap support for H3A4X5 as seed ortholog is 100%.

Group of orthologs #1609. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 L.chalumnae:123

Q5KCS0              	100.00%		M3XJA3              	100.00%
                    	       		H3BAW3              	15.59%
Bootstrap support for Q5KCS0 as seed ortholog is 100%.
Bootstrap support for M3XJA3 as seed ortholog is 100%.

Group of orthologs #1610. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 L.chalumnae:123

Q5KJZ4              	100.00%		H3A112              	100.00%
Bootstrap support for Q5KJZ4 as seed ortholog is 100%.
Bootstrap support for H3A112 as seed ortholog is 100%.

Group of orthologs #1611. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 L.chalumnae:123

Q5KP36              	100.00%		H3ADU9              	100.00%
Bootstrap support for Q5KP36 as seed ortholog is 100%.
Bootstrap support for H3ADU9 as seed ortholog is 100%.

Group of orthologs #1612. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 L.chalumnae:123

Q5KH59              	100.00%		H3ASU4              	100.00%
Bootstrap support for Q5KH59 as seed ortholog is 100%.
Bootstrap support for H3ASU4 as seed ortholog is 100%.

Group of orthologs #1613. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:78

Q5KF26              	100.00%		H3B7I8              	100.00%
Bootstrap support for Q5KF26 as seed ortholog is 96%.
Bootstrap support for H3B7I8 as seed ortholog is 97%.

Group of orthologs #1614. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5KAA2              	100.00%		H3ABV4              	100.00%
Q5KLV1              	18.58%		M3XGH9              	100.00%
                    	       		H3AE46              	57.11%
                    	       		H3ATQ8              	24.13%
                    	       		H3ABY4              	24.01%
                    	       		H3AE86              	23.08%
                    	       		H3B110              	22.49%
                    	       		H3BBN2              	20.40%
                    	       		H3ACA2              	15.91%
                    	       		M3XH33              	12.63%
                    	       		H3AZL0              	11.96%
                    	       		H3BAC9              	10.84%
                    	       		H3ASF4              	10.84%
Bootstrap support for Q5KAA2 as seed ortholog is 100%.
Bootstrap support for H3ABV4 as seed ortholog is 100%.
Bootstrap support for M3XGH9 as seed ortholog is 100%.

Group of orthologs #1615. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:14

Q5KKN1              	100.00%		H3BF11              	100.00%
                    	       		H3BF34              	61.86%
                    	       		H3BIC8              	47.21%
                    	       		H3BBE0              	25.35%
                    	       		H3ADX5              	21.16%
                    	       		H3AEK5              	19.07%
Bootstrap support for Q5KKN1 as seed ortholog is 100%.
Bootstrap support for H3BF11 as seed ortholog is 67%.
Alternative seed ortholog is H3AXY4 (14 bits away from this cluster)

Group of orthologs #1616. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:20

Q5KCD1              	100.00%		H3AJ48              	100.00%
                    	       		H3B7P6              	41.79%
                    	       		H3B3U3              	34.43%
                    	       		H3B7J9              	27.36%
Bootstrap support for Q5KCD1 as seed ortholog is 100%.
Bootstrap support for H3AJ48 as seed ortholog is 73%.
Alternative seed ortholog is H3BEV4 (20 bits away from this cluster)

Group of orthologs #1617. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5KF06              	100.00%		H3A6H4              	100.00%
                    	       		H3A5R7              	56.83%
Bootstrap support for Q5KF06 as seed ortholog is 100%.
Bootstrap support for H3A6H4 as seed ortholog is 100%.

Group of orthologs #1618. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:45

P0CR60              	100.00%		H3AP64              	100.00%
                    	       		H3B7K1              	25.31%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for H3AP64 as seed ortholog is 97%.

Group of orthologs #1619. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

P0CS64              	100.00%		H3ARZ7              	100.00%
                    	       		H3BGK0              	46.87%
Bootstrap support for P0CS64 as seed ortholog is 100%.
Bootstrap support for H3ARZ7 as seed ortholog is 100%.

Group of orthologs #1620. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5KB39              	100.00%		H3AQB5              	100.00%
                    	       		H3AAI2              	22.95%
Bootstrap support for Q5KB39 as seed ortholog is 100%.
Bootstrap support for H3AQB5 as seed ortholog is 100%.

Group of orthologs #1621. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5KGZ8              	100.00%		H3APW7              	100.00%
                    	       		H2ZRM6              	32.61%
Bootstrap support for Q5KGZ8 as seed ortholog is 100%.
Bootstrap support for H3APW7 as seed ortholog is 100%.

Group of orthologs #1622. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5K9H3              	100.00%		H3BEM5              	100.00%
                    	       		H3AC38              	47.60%
Bootstrap support for Q5K9H3 as seed ortholog is 100%.
Bootstrap support for H3BEM5 as seed ortholog is 100%.

Group of orthologs #1623. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5K9Z0              	100.00%		H3BD22              	100.00%
Bootstrap support for Q5K9Z0 as seed ortholog is 100%.
Bootstrap support for H3BD22 as seed ortholog is 100%.

Group of orthologs #1624. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:58

Q5KFF0              	100.00%		H3BFR6              	100.00%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for H3BFR6 as seed ortholog is 99%.

Group of orthologs #1625. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 L.chalumnae:122

Q5KLZ3              	100.00%		H3B9K8              	100.00%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for H3B9K8 as seed ortholog is 100%.

Group of orthologs #1626. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 L.chalumnae:121

Q5KCQ2              	100.00%		H3A101              	100.00%
                    	       		H3A3M4              	29.13%
Bootstrap support for Q5KCQ2 as seed ortholog is 100%.
Bootstrap support for H3A101 as seed ortholog is 100%.

Group of orthologs #1627. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:27 L.chalumnae:2

Q5KLC5              	100.00%		H3AXF4              	100.00%
Bootstrap support for Q5KLC5 as seed ortholog is 80%.
Bootstrap support for H3AXF4 as seed ortholog is 53%.
Alternative seed ortholog is H3B355 (2 bits away from this cluster)

Group of orthologs #1628. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 L.chalumnae:72

Q5KLK0              	100.00%		H3B2E8              	100.00%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for H3B2E8 as seed ortholog is 99%.

Group of orthologs #1629. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 L.chalumnae:22

Q5KH96              	100.00%		H3BBH5              	100.00%
Bootstrap support for Q5KH96 as seed ortholog is 100%.
Bootstrap support for H3BBH5 as seed ortholog is 74%.
Alternative seed ortholog is H3ABM0 (22 bits away from this cluster)

Group of orthologs #1630. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 L.chalumnae:120

Q5KNI7              	100.00%		H3AXH9              	100.00%
                    	       		H3B2A6              	97.06%
Bootstrap support for Q5KNI7 as seed ortholog is 100%.
Bootstrap support for H3AXH9 as seed ortholog is 100%.

Group of orthologs #1631. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 L.chalumnae:120

Q5KI05              	100.00%		H3BC78              	100.00%
                    	       		H3AJ29              	71.09%
Bootstrap support for Q5KI05 as seed ortholog is 100%.
Bootstrap support for H3BC78 as seed ortholog is 100%.

Group of orthologs #1632. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 L.chalumnae:120

Q5K9J1              	100.00%		H3A7G8              	100.00%
Bootstrap support for Q5K9J1 as seed ortholog is 100%.
Bootstrap support for H3A7G8 as seed ortholog is 100%.

Group of orthologs #1633. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 L.chalumnae:55

Q5KCX6              	100.00%		H3BHM5              	100.00%
                    	       		H3BGY7              	50.95%
                    	       		H3A4X3              	45.00%
                    	       		H2ZZF6              	35.71%
                    	       		H3A034              	11.43%
                    	       		H3B2I3              	8.57%
                    	       		H3AGQ3              	8.33%
Bootstrap support for Q5KCX6 as seed ortholog is 100%.
Bootstrap support for H3BHM5 as seed ortholog is 99%.

Group of orthologs #1634. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 L.chalumnae:119

P0CQ30              	100.00%		H3A5C3              	100.00%
Bootstrap support for P0CQ30 as seed ortholog is 100%.
Bootstrap support for H3A5C3 as seed ortholog is 100%.

Group of orthologs #1635. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 L.chalumnae:119

Q5KG24              	100.00%		H3A3E4              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 100%.
Bootstrap support for H3A3E4 as seed ortholog is 100%.

Group of orthologs #1636. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 L.chalumnae:119

P0CO96              	100.00%		H3AK60              	100.00%
Bootstrap support for P0CO96 as seed ortholog is 100%.
Bootstrap support for H3AK60 as seed ortholog is 100%.

Group of orthologs #1637. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KP52              	100.00%		H3AT45              	100.00%
                    	       		H2ZXI5              	17.81%
                    	       		M3XGT4              	10.97%
                    	       		H3ACZ0              	8.25%
Bootstrap support for Q5KP52 as seed ortholog is 100%.
Bootstrap support for H3AT45 as seed ortholog is 100%.

Group of orthologs #1638. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:42 L.chalumnae:118

Q5KHE7              	100.00%		H3AMM3              	100.00%
Q5KEI5              	36.92%		H2ZWT0              	23.83%
Bootstrap support for Q5KHE7 as seed ortholog is 86%.
Bootstrap support for H3AMM3 as seed ortholog is 100%.

Group of orthologs #1639. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KGW6              	100.00%		H3A8M9              	100.00%
Q5KI76              	7.29%		
Bootstrap support for Q5KGW6 as seed ortholog is 100%.
Bootstrap support for H3A8M9 as seed ortholog is 100%.

Group of orthologs #1640. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KEJ8              	100.00%		H3AN43              	100.00%
                    	       		H3AHV6              	23.70%
Bootstrap support for Q5KEJ8 as seed ortholog is 100%.
Bootstrap support for H3AN43 as seed ortholog is 100%.

Group of orthologs #1641. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KKT8              	100.00%		H3B4I6              	100.00%
                    	       		H3BDF3              	22.43%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for H3B4I6 as seed ortholog is 100%.

Group of orthologs #1642. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:3

Q5KGL5              	100.00%		H3A5S6              	100.00%
Bootstrap support for Q5KGL5 as seed ortholog is 100%.
Bootstrap support for H3A5S6 as seed ortholog is 44%.
Alternative seed ortholog is H2ZYY6 (3 bits away from this cluster)

Group of orthologs #1643. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KEB8              	100.00%		H3AH94              	100.00%
Bootstrap support for Q5KEB8 as seed ortholog is 100%.
Bootstrap support for H3AH94 as seed ortholog is 100%.

Group of orthologs #1644. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:31

Q5KBR9              	100.00%		H3APT4              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for H3APT4 as seed ortholog is 95%.

Group of orthologs #1645. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

P0CO38              	100.00%		H3B5U5              	100.00%
Bootstrap support for P0CO38 as seed ortholog is 100%.
Bootstrap support for H3B5U5 as seed ortholog is 100%.

Group of orthologs #1646. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KAL3              	100.00%		H3B520              	100.00%
Bootstrap support for Q5KAL3 as seed ortholog is 100%.
Bootstrap support for H3B520 as seed ortholog is 100%.

Group of orthologs #1647. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KAL4              	100.00%		H3B8U8              	100.00%
Bootstrap support for Q5KAL4 as seed ortholog is 100%.
Bootstrap support for H3B8U8 as seed ortholog is 100%.

Group of orthologs #1648. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:68 L.chalumnae:118

P0CN72              	100.00%		H3BFP8              	100.00%
Bootstrap support for P0CN72 as seed ortholog is 99%.
Bootstrap support for H3BFP8 as seed ortholog is 100%.

Group of orthologs #1649. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KHL3              	100.00%		H3B7K8              	100.00%
Bootstrap support for Q5KHL3 as seed ortholog is 100%.
Bootstrap support for H3B7K8 as seed ortholog is 100%.

Group of orthologs #1650. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KLH7              	100.00%		H3B3H9              	100.00%
Bootstrap support for Q5KLH7 as seed ortholog is 100%.
Bootstrap support for H3B3H9 as seed ortholog is 100%.

Group of orthologs #1651. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KKU9              	100.00%		H3B5C4              	100.00%
Bootstrap support for Q5KKU9 as seed ortholog is 100%.
Bootstrap support for H3B5C4 as seed ortholog is 100%.

Group of orthologs #1652. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:22

Q5KH55              	100.00%		H3BHZ2              	100.00%
Bootstrap support for Q5KH55 as seed ortholog is 100%.
Bootstrap support for H3BHZ2 as seed ortholog is 77%.

Group of orthologs #1653. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 L.chalumnae:118

Q5KPH7              	100.00%		H3BH28              	100.00%
Bootstrap support for Q5KPH7 as seed ortholog is 100%.
Bootstrap support for H3BH28 as seed ortholog is 100%.

Group of orthologs #1654. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KIW3              	100.00%		H3B455              	100.00%
                    	       		H3AK36              	31.10%
Bootstrap support for Q5KIW3 as seed ortholog is 100%.
Bootstrap support for H3B455 as seed ortholog is 100%.

Group of orthologs #1655. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KA94              	100.00%		H3ABP8              	100.00%
Bootstrap support for Q5KA94 as seed ortholog is 100%.
Bootstrap support for H3ABP8 as seed ortholog is 100%.

Group of orthologs #1656. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KCG2              	100.00%		H3AIS5              	100.00%
Bootstrap support for Q5KCG2 as seed ortholog is 100%.
Bootstrap support for H3AIS5 as seed ortholog is 100%.

Group of orthologs #1657. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

P0CO50              	100.00%		H3AQW0              	100.00%
Bootstrap support for P0CO50 as seed ortholog is 100%.
Bootstrap support for H3AQW0 as seed ortholog is 100%.

Group of orthologs #1658. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KCA1              	100.00%		H3AVN8              	100.00%
Bootstrap support for Q5KCA1 as seed ortholog is 100%.
Bootstrap support for H3AVN8 as seed ortholog is 100%.

Group of orthologs #1659. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KHC7              	100.00%		H3AW86              	100.00%
Bootstrap support for Q5KHC7 as seed ortholog is 100%.
Bootstrap support for H3AW86 as seed ortholog is 100%.

Group of orthologs #1660. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KC49              	100.00%		H3BEU1              	100.00%
Bootstrap support for Q5KC49 as seed ortholog is 100%.
Bootstrap support for H3BEU1 as seed ortholog is 100%.

Group of orthologs #1661. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 L.chalumnae:117

Q5KL77              	100.00%		H3BAJ8              	100.00%
Bootstrap support for Q5KL77 as seed ortholog is 100%.
Bootstrap support for H3BAJ8 as seed ortholog is 100%.

Group of orthologs #1662. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 L.chalumnae:116

Q5KD47              	100.00%		H3BCY5              	100.00%
Q5KEG9              	100.00%		H3B7H9              	100.00%
Bootstrap support for Q5KD47 as seed ortholog is 100%.
Bootstrap support for Q5KEG9 as seed ortholog is 100%.
Bootstrap support for H3BCY5 as seed ortholog is 100%.
Bootstrap support for H3B7H9 as seed ortholog is 100%.

Group of orthologs #1663. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:42 L.chalumnae:47

Q5KK76              	100.00%		H3AQH4              	100.00%
Q5KDS4              	9.35%		
Bootstrap support for Q5KK76 as seed ortholog is 92%.
Bootstrap support for H3AQH4 as seed ortholog is 90%.

Group of orthologs #1664. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 L.chalumnae:116

Q5KPT7              	100.00%		H2ZV86              	100.00%
Bootstrap support for Q5KPT7 as seed ortholog is 100%.
Bootstrap support for H2ZV86 as seed ortholog is 100%.

Group of orthologs #1665. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 L.chalumnae:116

P0CS56              	100.00%		H3AEJ9              	100.00%
Bootstrap support for P0CS56 as seed ortholog is 100%.
Bootstrap support for H3AEJ9 as seed ortholog is 100%.

Group of orthologs #1666. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:55 L.chalumnae:116

Q5KK58              	100.00%		H3A2N8              	100.00%
Bootstrap support for Q5KK58 as seed ortholog is 94%.
Bootstrap support for H3A2N8 as seed ortholog is 100%.

Group of orthologs #1667. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 L.chalumnae:116

Q5KMZ5              	100.00%		H3A3Y7              	100.00%
Bootstrap support for Q5KMZ5 as seed ortholog is 100%.
Bootstrap support for H3A3Y7 as seed ortholog is 100%.

Group of orthologs #1668. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 L.chalumnae:116

Q5K8Z9              	100.00%		H3BCJ6              	100.00%
Bootstrap support for Q5K8Z9 as seed ortholog is 100%.
Bootstrap support for H3BCJ6 as seed ortholog is 100%.

Group of orthologs #1669. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 L.chalumnae:52

Q5KA73              	100.00%		H3BEM2              	100.00%
                    	       		H3AAF2              	50.24%
                    	       		H3ALY9              	42.82%
                    	       		H3A940              	41.15%
                    	       		H3B2F5              	13.40%
                    	       		H3BFS9              	7.66%
Bootstrap support for Q5KA73 as seed ortholog is 100%.
Bootstrap support for H3BEM2 as seed ortholog is 99%.

Group of orthologs #1670. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 L.chalumnae:115

Q5KLW5              	100.00%		H3BHH0              	100.00%
                    	       		H2ZYC0              	68.08%
                    	       		H3A1V9              	40.54%
                    	       		H3B8B1              	10.59%
Bootstrap support for Q5KLW5 as seed ortholog is 100%.
Bootstrap support for H3BHH0 as seed ortholog is 100%.

Group of orthologs #1671. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 L.chalumnae:115

Q5KN25              	100.00%		H3ABR9              	100.00%
                    	       		H3A3N3              	96.67%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for H3ABR9 as seed ortholog is 100%.

Group of orthologs #1672. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 L.chalumnae:115

Q5KLD3              	100.00%		H3AX14              	100.00%
                    	       		M3XLN5              	46.10%
Bootstrap support for Q5KLD3 as seed ortholog is 100%.
Bootstrap support for H3AX14 as seed ortholog is 100%.

Group of orthologs #1673. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 L.chalumnae:115

Q5KI13              	100.00%		H3AVB7              	100.00%
Bootstrap support for Q5KI13 as seed ortholog is 100%.
Bootstrap support for H3AVB7 as seed ortholog is 100%.

Group of orthologs #1674. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 L.chalumnae:115

Q5KPD3              	100.00%		H3BG60              	100.00%
Bootstrap support for Q5KPD3 as seed ortholog is 100%.
Bootstrap support for H3BG60 as seed ortholog is 100%.

Group of orthologs #1675. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:3

Q5KIG2              	100.00%		H3A3L9              	100.00%
                    	       		H3BCG4              	50.59%
                    	       		H3B753              	40.30%
Bootstrap support for Q5KIG2 as seed ortholog is 100%.
Bootstrap support for H3A3L9 as seed ortholog is 68%.
Alternative seed ortholog is H3AM45 (3 bits away from this cluster)

Group of orthologs #1676. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5KKG2              	100.00%		H3AKK7              	100.00%
Q5KDQ6              	11.68%		H2ZXZ2              	22.60%
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for H3AKK7 as seed ortholog is 100%.

Group of orthologs #1677. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:20

Q5KF54              	100.00%		H3AK41              	100.00%
                    	       		H3ANP2              	41.88%
Bootstrap support for Q5KF54 as seed ortholog is 100%.
Bootstrap support for H3AK41 as seed ortholog is 38%.
Alternative seed ortholog is H2ZVG0 (20 bits away from this cluster)

Group of orthologs #1678. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:43 L.chalumnae:114

Q5KCS6              	100.00%		H3APW8              	100.00%
                    	       		H3A4F7              	15.46%
Bootstrap support for Q5KCS6 as seed ortholog is 93%.
Bootstrap support for H3APW8 as seed ortholog is 100%.

Group of orthologs #1679. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5K7T5              	100.00%		H3B8P1              	100.00%
                    	       		M3XI03              	53.10%
Bootstrap support for Q5K7T5 as seed ortholog is 100%.
Bootstrap support for H3B8P1 as seed ortholog is 100%.

Group of orthologs #1680. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:68 L.chalumnae:114

Q5KE19              	100.00%		H2ZXQ5              	100.00%
Bootstrap support for Q5KE19 as seed ortholog is 99%.
Bootstrap support for H2ZXQ5 as seed ortholog is 100%.

Group of orthologs #1681. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5KIE8              	100.00%		H2ZZC6              	100.00%
Bootstrap support for Q5KIE8 as seed ortholog is 100%.
Bootstrap support for H2ZZC6 as seed ortholog is 100%.

Group of orthologs #1682. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5K7G5              	100.00%		H3AJN6              	100.00%
Bootstrap support for Q5K7G5 as seed ortholog is 100%.
Bootstrap support for H3AJN6 as seed ortholog is 100%.

Group of orthologs #1683. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5K8L4              	100.00%		H3AKA6              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for H3AKA6 as seed ortholog is 100%.

Group of orthologs #1684. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5KIC9              	100.00%		H3AS15              	100.00%
Bootstrap support for Q5KIC9 as seed ortholog is 100%.
Bootstrap support for H3AS15 as seed ortholog is 100%.

Group of orthologs #1685. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

Q5K8V5              	100.00%		H3B3L7              	100.00%
Bootstrap support for Q5K8V5 as seed ortholog is 100%.
Bootstrap support for H3B3L7 as seed ortholog is 100%.

Group of orthologs #1686. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:114

P0CR68              	100.00%		H3B9L3              	100.00%
Bootstrap support for P0CR68 as seed ortholog is 100%.
Bootstrap support for H3B9L3 as seed ortholog is 100%.

Group of orthologs #1687. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 L.chalumnae:72

Q5KJW6              	100.00%		H3B7Y2              	100.00%
Bootstrap support for Q5KJW6 as seed ortholog is 100%.
Bootstrap support for H3B7Y2 as seed ortholog is 100%.

Group of orthologs #1688. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:113

Q5KFN4              	100.00%		H3AE10              	100.00%
                    	       		H3AB23              	16.53%
Bootstrap support for Q5KFN4 as seed ortholog is 100%.
Bootstrap support for H3AE10 as seed ortholog is 100%.

Group of orthologs #1689. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:8 L.chalumnae:49

Q5KKF3              	100.00%		H3AKL4              	100.00%
                    	       		H3B5X1              	43.27%
Bootstrap support for Q5KKF3 as seed ortholog is 62%.
Alternative seed ortholog is Q5KFL9 (8 bits away from this cluster)
Bootstrap support for H3AKL4 as seed ortholog is 92%.

Group of orthologs #1690. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:113

Q5KNP8              	100.00%		H2ZSV5              	100.00%
Bootstrap support for Q5KNP8 as seed ortholog is 100%.
Bootstrap support for H2ZSV5 as seed ortholog is 100%.

Group of orthologs #1691. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:113

Q5KFG9              	100.00%		H3A4M9              	100.00%
Bootstrap support for Q5KFG9 as seed ortholog is 100%.
Bootstrap support for H3A4M9 as seed ortholog is 100%.

Group of orthologs #1692. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:113

Q5K8K6              	100.00%		H3BBL8              	100.00%
Bootstrap support for Q5K8K6 as seed ortholog is 100%.
Bootstrap support for H3BBL8 as seed ortholog is 100%.

Group of orthologs #1693. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:113

Q5KH04              	100.00%		H3BCA1              	100.00%
Bootstrap support for Q5KH04 as seed ortholog is 100%.
Bootstrap support for H3BCA1 as seed ortholog is 100%.

Group of orthologs #1694. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:113

Q5KI04              	100.00%		H3BFH2              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for H3BFH2 as seed ortholog is 100%.

Group of orthologs #1695. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 L.chalumnae:11

Q5KLA0              	100.00%		H3BII5              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for H3BII5 as seed ortholog is 62%.
Alternative seed ortholog is H3A3S9 (11 bits away from this cluster)

Group of orthologs #1696. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 L.chalumnae:112

Q5KER1              	100.00%		H3B8K9              	100.00%
                    	       		H2ZUD9              	65.37%
                    	       		H3AYL8              	60.52%
                    	       		H2ZYK2              	8.41%
Bootstrap support for Q5KER1 as seed ortholog is 100%.
Bootstrap support for H3B8K9 as seed ortholog is 100%.

Group of orthologs #1697. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 L.chalumnae:112

Q5KC39              	100.00%		H3B4I9              	100.00%
Q5KNX2              	10.22%		
Q5KLY3              	9.64%		
Bootstrap support for Q5KC39 as seed ortholog is 100%.
Bootstrap support for H3B4I9 as seed ortholog is 100%.

Group of orthologs #1698. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 L.chalumnae:112

Q5KHX0              	100.00%		H2ZU10              	100.00%
Bootstrap support for Q5KHX0 as seed ortholog is 100%.
Bootstrap support for H2ZU10 as seed ortholog is 100%.

Group of orthologs #1699. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 L.chalumnae:112

Q5KL89              	100.00%		H3AGY8              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for H3AGY8 as seed ortholog is 100%.

Group of orthologs #1700. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 L.chalumnae:112

Q5KJ52              	100.00%		H3AY61              	100.00%
Bootstrap support for Q5KJ52 as seed ortholog is 100%.
Bootstrap support for H3AY61 as seed ortholog is 100%.

Group of orthologs #1701. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:3 L.chalumnae:111

Q5KDM8              	100.00%		H3AF68              	100.00%
Q5KDM5              	89.35%		H3B2T4              	97.24%
                    	       		H3A460              	27.59%
Bootstrap support for Q5KDM8 as seed ortholog is 44%.
Alternative seed ortholog is Q5KEW7 (3 bits away from this cluster)
Bootstrap support for H3AF68 as seed ortholog is 100%.

Group of orthologs #1702. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:48

Q5KIE5              	100.00%		H3A3G0              	100.00%
                    	       		H3B7Y4              	69.00%
Bootstrap support for Q5KIE5 as seed ortholog is 100%.
Bootstrap support for H3A3G0 as seed ortholog is 99%.

Group of orthologs #1703. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:111

Q5KJE8              	100.00%		H3AGC4              	100.00%
                    	       		H3AU62              	17.61%
Bootstrap support for Q5KJE8 as seed ortholog is 100%.
Bootstrap support for H3AGC4 as seed ortholog is 100%.

Group of orthologs #1704. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:111

Q5KDG2              	100.00%		H3AXG6              	100.00%
                    	       		H3AMI3              	10.14%
Bootstrap support for Q5KDG2 as seed ortholog is 100%.
Bootstrap support for H3AXG6 as seed ortholog is 100%.

Group of orthologs #1705. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:111

Q5KB21              	100.00%		H2ZU97              	100.00%
Bootstrap support for Q5KB21 as seed ortholog is 100%.
Bootstrap support for H2ZU97 as seed ortholog is 100%.

Group of orthologs #1706. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:46

Q5KGP8              	100.00%		H2ZX33              	100.00%
Bootstrap support for Q5KGP8 as seed ortholog is 100%.
Bootstrap support for H2ZX33 as seed ortholog is 88%.

Group of orthologs #1707. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:111

Q5KF63              	100.00%		H3A0T0              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for H3A0T0 as seed ortholog is 100%.

Group of orthologs #1708. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:54

Q5KP48              	100.00%		H3A6Y7              	100.00%
Bootstrap support for Q5KP48 as seed ortholog is 100%.
Bootstrap support for H3A6Y7 as seed ortholog is 96%.

Group of orthologs #1709. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:111

Q5KL97              	100.00%		H3AEI4              	100.00%
Bootstrap support for Q5KL97 as seed ortholog is 100%.
Bootstrap support for H3AEI4 as seed ortholog is 100%.

Group of orthologs #1710. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 L.chalumnae:111

Q5KNF1              	100.00%		H3AMH8              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for H3AMH8 as seed ortholog is 100%.

Group of orthologs #1711. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 L.chalumnae:110

Q5KKD6              	100.00%		H2ZUI6              	100.00%
Bootstrap support for Q5KKD6 as seed ortholog is 100%.
Bootstrap support for H2ZUI6 as seed ortholog is 100%.

Group of orthologs #1712. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 L.chalumnae:110

Q5KEA5              	100.00%		H3A1P6              	100.00%
Bootstrap support for Q5KEA5 as seed ortholog is 100%.
Bootstrap support for H3A1P6 as seed ortholog is 100%.

Group of orthologs #1713. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 L.chalumnae:110

Q5KAA6              	100.00%		H3B267              	100.00%
Bootstrap support for Q5KAA6 as seed ortholog is 100%.
Bootstrap support for H3B267 as seed ortholog is 100%.

Group of orthologs #1714. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:109

Q5KGB9              	100.00%		H3AS69              	100.00%
                    	       		H3B5F5              	100.00%
                    	       		H3A2Z1              	49.93%
Bootstrap support for Q5KGB9 as seed ortholog is 100%.
Bootstrap support for H3AS69 as seed ortholog is 100%.
Bootstrap support for H3B5F5 as seed ortholog is 100%.

Group of orthologs #1715. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:109

Q5K6X6              	100.00%		H3AQX8              	100.00%
Bootstrap support for Q5K6X6 as seed ortholog is 100%.
Bootstrap support for H3AQX8 as seed ortholog is 100%.

Group of orthologs #1716. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:109

Q5K8W8              	100.00%		H3AWK3              	100.00%
Bootstrap support for Q5K8W8 as seed ortholog is 70%.
Alternative seed ortholog is Q5KM72 (52 bits away from this cluster)
Bootstrap support for H3AWK3 as seed ortholog is 100%.

Group of orthologs #1717. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:109

Q5KE42              	100.00%		H3AVX1              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for H3AVX1 as seed ortholog is 100%.

Group of orthologs #1718. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:109

Q5K9N9              	100.00%		H3B312              	100.00%
Bootstrap support for Q5K9N9 as seed ortholog is 100%.
Bootstrap support for H3B312 as seed ortholog is 100%.

Group of orthologs #1719. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:109

Q5KNT2              	100.00%		H3APQ3              	100.00%
Bootstrap support for Q5KNT2 as seed ortholog is 100%.
Bootstrap support for H3APQ3 as seed ortholog is 100%.

Group of orthologs #1720. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:13 L.chalumnae:3

Q5KPY2              	100.00%		H3APP7              	100.00%
Bootstrap support for Q5KPY2 as seed ortholog is 72%.
Alternative seed ortholog is Q5KKA2 (13 bits away from this cluster)
Bootstrap support for H3APP7 as seed ortholog is 52%.
Alternative seed ortholog is H3B355 (3 bits away from this cluster)

Group of orthologs #1721. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 L.chalumnae:109

Q5KEX5              	100.00%		H3BAW9              	100.00%
Bootstrap support for Q5KEX5 as seed ortholog is 100%.
Bootstrap support for H3BAW9 as seed ortholog is 100%.

Group of orthologs #1722. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:108

Q5KH48              	100.00%		H3AI15              	100.00%
                    	       		H3AQI8              	21.35%
Bootstrap support for Q5KH48 as seed ortholog is 100%.
Bootstrap support for H3AI15 as seed ortholog is 100%.

Group of orthologs #1723. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:108

Q5KL25              	100.00%		H3A3W0              	100.00%
Bootstrap support for Q5KL25 as seed ortholog is 100%.
Bootstrap support for H3A3W0 as seed ortholog is 100%.

Group of orthologs #1724. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:32

P0CS68              	100.00%		H3AT93              	100.00%
Bootstrap support for P0CS68 as seed ortholog is 100%.
Bootstrap support for H3AT93 as seed ortholog is 80%.

Group of orthologs #1725. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:54

Q5KNN5              	100.00%		H3AMH7              	100.00%
Bootstrap support for Q5KNN5 as seed ortholog is 100%.
Bootstrap support for H3AMH7 as seed ortholog is 90%.

Group of orthologs #1726. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:108

Q5K786              	100.00%		H3B8C1              	100.00%
Bootstrap support for Q5K786 as seed ortholog is 100%.
Bootstrap support for H3B8C1 as seed ortholog is 100%.

Group of orthologs #1727. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:108

Q5K865              	100.00%		H3BCR1              	100.00%
Bootstrap support for Q5K865 as seed ortholog is 100%.
Bootstrap support for H3BCR1 as seed ortholog is 100%.

Group of orthologs #1728. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:108

Q5KDJ5              	100.00%		H3BC87              	100.00%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for H3BC87 as seed ortholog is 100%.

Group of orthologs #1729. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 L.chalumnae:108

Q5KGY5              	100.00%		H3BDH2              	100.00%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for H3BDH2 as seed ortholog is 100%.

Group of orthologs #1730. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:107

Q5KCN5              	100.00%		H3A834              	100.00%
                    	       		H3A0G1              	18.31%
                    	       		H3BCY4              	15.34%
Bootstrap support for Q5KCN5 as seed ortholog is 100%.
Bootstrap support for H3A834 as seed ortholog is 100%.

Group of orthologs #1731. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:23 L.chalumnae:61

Q5K8E1              	100.00%		H3AC21              	100.00%
                    	       		H3BB40              	34.40%
Bootstrap support for Q5K8E1 as seed ortholog is 98%.
Bootstrap support for H3AC21 as seed ortholog is 99%.

Group of orthologs #1732. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:25

Q5KN24              	100.00%		H3ALI6              	100.00%
Q5KN90              	56.28%		
Bootstrap support for Q5KN24 as seed ortholog is 100%.
Bootstrap support for H3ALI6 as seed ortholog is 70%.
Alternative seed ortholog is M3XL86 (25 bits away from this cluster)

Group of orthologs #1733. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:107

Q5KMM2              	100.00%		H3AT15              	100.00%
                    	       		H3AAF7              	17.43%
Bootstrap support for Q5KMM2 as seed ortholog is 100%.
Bootstrap support for H3AT15 as seed ortholog is 100%.

Group of orthologs #1734. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:107

Q5KPC0              	100.00%		H2ZTX4              	100.00%
Bootstrap support for Q5KPC0 as seed ortholog is 100%.
Bootstrap support for H2ZTX4 as seed ortholog is 100%.

Group of orthologs #1735. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:107

Q5KP16              	100.00%		H3A2M2              	100.00%
Bootstrap support for Q5KP16 as seed ortholog is 100%.
Bootstrap support for H3A2M2 as seed ortholog is 100%.

Group of orthologs #1736. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:107

Q5KJL3              	100.00%		H3AMG5              	100.00%
Bootstrap support for Q5KJL3 as seed ortholog is 100%.
Bootstrap support for H3AMG5 as seed ortholog is 100%.

Group of orthologs #1737. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:40 L.chalumnae:45

Q5KMM3              	100.00%		H3B211              	100.00%
Bootstrap support for Q5KMM3 as seed ortholog is 82%.
Bootstrap support for H3B211 as seed ortholog is 87%.

Group of orthologs #1738. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 L.chalumnae:107

Q5KP66              	100.00%		M3XLB8              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for M3XLB8 as seed ortholog is 100%.

Group of orthologs #1739. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5K6Y2              	100.00%		H3BHC6              	100.00%
                    	       		H3B3B1              	69.80%
                    	       		H3B3W6              	67.76%
Bootstrap support for Q5K6Y2 as seed ortholog is 100%.
Bootstrap support for H3BHC6 as seed ortholog is 100%.

Group of orthologs #1740. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5KG47              	100.00%		H3AX58              	100.00%
                    	       		M3XII1              	28.30%
Bootstrap support for Q5KG47 as seed ortholog is 100%.
Bootstrap support for H3AX58 as seed ortholog is 100%.

Group of orthologs #1741. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:7

Q5KHB8              	100.00%		H3B037              	100.00%
Q5K7D6              	13.82%		
Bootstrap support for Q5KHB8 as seed ortholog is 100%.
Bootstrap support for H3B037 as seed ortholog is 60%.
Alternative seed ortholog is H3APW6 (7 bits away from this cluster)

Group of orthologs #1742. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

P0CM10              	100.00%		H3AB44              	100.00%
Bootstrap support for P0CM10 as seed ortholog is 100%.
Bootstrap support for H3AB44 as seed ortholog is 100%.

Group of orthologs #1743. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5KIP4              	100.00%		H3A3D8              	100.00%
Bootstrap support for Q5KIP4 as seed ortholog is 100%.
Bootstrap support for H3A3D8 as seed ortholog is 100%.

Group of orthologs #1744. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

P0CM68              	100.00%		H3ARG0              	100.00%
Bootstrap support for P0CM68 as seed ortholog is 100%.
Bootstrap support for H3ARG0 as seed ortholog is 100%.

Group of orthologs #1745. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:65

P0CS54              	100.00%		H3B6P2              	100.00%
Bootstrap support for P0CS54 as seed ortholog is 100%.
Bootstrap support for H3B6P2 as seed ortholog is 88%.

Group of orthologs #1746. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:30 L.chalumnae:106

Q5KLF1              	100.00%		H3AW97              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 95%.
Bootstrap support for H3AW97 as seed ortholog is 100%.

Group of orthologs #1747. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5K6X0              	100.00%		H3BGB3              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 100%.
Bootstrap support for H3BGB3 as seed ortholog is 100%.

Group of orthologs #1748. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:46 L.chalumnae:62

Q5KJW8              	100.00%		H3B334              	100.00%
Bootstrap support for Q5KJW8 as seed ortholog is 99%.
Bootstrap support for H3B334 as seed ortholog is 99%.

Group of orthologs #1749. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5K905              	100.00%		H3BFV1              	100.00%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for H3BFV1 as seed ortholog is 100%.

Group of orthologs #1750. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:4 L.chalumnae:106

Q5KAW3              	100.00%		H3BET6              	100.00%
Bootstrap support for Q5KAW3 as seed ortholog is 54%.
Alternative seed ortholog is Q5KB82 (4 bits away from this cluster)
Bootstrap support for H3BET6 as seed ortholog is 100%.

Group of orthologs #1751. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5KF35              	100.00%		H3BIM0              	100.00%
Bootstrap support for Q5KF35 as seed ortholog is 100%.
Bootstrap support for H3BIM0 as seed ortholog is 100%.

Group of orthologs #1752. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:2

Q5KKN5              	100.00%		H3BHD0              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for H3BHD0 as seed ortholog is 51%.
Alternative seed ortholog is H3A2W4 (2 bits away from this cluster)

Group of orthologs #1753. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 L.chalumnae:106

Q5KPW1              	100.00%		H3BEQ5              	100.00%
Bootstrap support for Q5KPW1 as seed ortholog is 100%.
Bootstrap support for H3BEQ5 as seed ortholog is 100%.

Group of orthologs #1754. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 L.chalumnae:105

Q5KNW0              	100.00%		H3AR81              	100.00%
                    	       		H3AZR8              	32.77%
Bootstrap support for Q5KNW0 as seed ortholog is 100%.
Bootstrap support for H3AR81 as seed ortholog is 100%.

Group of orthologs #1755. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

P0CM92              	100.00%		M3XII0              	100.00%
                    	       		H3AMX9              	59.34%
                    	       		H3AA30              	54.14%
                    	       		H3ABD5              	16.55%
                    	       		H2ZX57              	15.48%
Bootstrap support for P0CM92 as seed ortholog is 100%.
Bootstrap support for M3XII0 as seed ortholog is 100%.

Group of orthologs #1756. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KH57              	100.00%		M3XKU0              	100.00%
Q5KH47              	16.81%		H3AJB0              	22.73%
Bootstrap support for Q5KH57 as seed ortholog is 100%.
Bootstrap support for M3XKU0 as seed ortholog is 100%.

Group of orthologs #1757. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

P0CM52              	100.00%		H2ZXG7              	100.00%
Bootstrap support for P0CM52 as seed ortholog is 100%.
Bootstrap support for H2ZXG7 as seed ortholog is 100%.

Group of orthologs #1758. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KBR8              	100.00%		H3AM59              	100.00%
Bootstrap support for Q5KBR8 as seed ortholog is 100%.
Bootstrap support for H3AM59 as seed ortholog is 100%.

Group of orthologs #1759. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KKD7              	100.00%		H3AE57              	100.00%
Bootstrap support for Q5KKD7 as seed ortholog is 100%.
Bootstrap support for H3AE57 as seed ortholog is 100%.

Group of orthologs #1760. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KPA8              	100.00%		H3ABM1              	100.00%
Bootstrap support for Q5KPA8 as seed ortholog is 100%.
Bootstrap support for H3ABM1 as seed ortholog is 100%.

Group of orthologs #1761. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KLP7              	100.00%		H3ALE8              	100.00%
Bootstrap support for Q5KLP7 as seed ortholog is 100%.
Bootstrap support for H3ALE8 as seed ortholog is 100%.

Group of orthologs #1762. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

P0CR58              	100.00%		H3B9S5              	100.00%
Bootstrap support for P0CR58 as seed ortholog is 100%.
Bootstrap support for H3B9S5 as seed ortholog is 100%.

Group of orthologs #1763. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KBB0              	100.00%		H3B923              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for H3B923 as seed ortholog is 100%.

Group of orthologs #1764. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KCK0              	100.00%		H3BG62              	100.00%
Bootstrap support for Q5KCK0 as seed ortholog is 100%.
Bootstrap support for H3BG62 as seed ortholog is 100%.

Group of orthologs #1765. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KGR1              	100.00%		H3BDB8              	100.00%
Bootstrap support for Q5KGR1 as seed ortholog is 100%.
Bootstrap support for H3BDB8 as seed ortholog is 100%.

Group of orthologs #1766. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 L.chalumnae:104

Q5KMS2              	100.00%		H3BDL8              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for H3BDL8 as seed ortholog is 100%.

Group of orthologs #1767. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 L.chalumnae:103

Q5KPM5              	100.00%		M3XJM0              	100.00%
Q5KAF6              	34.90%		
Bootstrap support for Q5KPM5 as seed ortholog is 100%.
Bootstrap support for M3XJM0 as seed ortholog is 100%.

Group of orthologs #1768. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 L.chalumnae:36

P0CP32              	100.00%		H3AKU5              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for H3AKU5 as seed ortholog is 79%.

Group of orthologs #1769. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:19 L.chalumnae:29

Q5KJM2              	100.00%		H3AEG6              	100.00%
Bootstrap support for Q5KJM2 as seed ortholog is 67%.
Alternative seed ortholog is Q5KP11 (19 bits away from this cluster)
Bootstrap support for H3AEG6 as seed ortholog is 82%.

Group of orthologs #1770. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 L.chalumnae:103

Q5KC16              	100.00%		H3B149              	100.00%
Bootstrap support for Q5KC16 as seed ortholog is 100%.
Bootstrap support for H3B149 as seed ortholog is 100%.

Group of orthologs #1771. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 L.chalumnae:103

Q5KKG0              	100.00%		H3ASK4              	100.00%
Bootstrap support for Q5KKG0 as seed ortholog is 100%.
Bootstrap support for H3ASK4 as seed ortholog is 100%.

Group of orthologs #1772. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:6

Q5KIQ8              	100.00%		H3A706              	100.00%
                    	       		H3APK2              	22.44%
Bootstrap support for Q5KIQ8 as seed ortholog is 100%.
Bootstrap support for H3A706 as seed ortholog is 69%.
Alternative seed ortholog is H3B8K1 (6 bits away from this cluster)

Group of orthologs #1773. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5K811              	100.00%		H3B755              	100.00%
                    	       		H3AM83              	55.51%
Bootstrap support for Q5K811 as seed ortholog is 100%.
Bootstrap support for H3B755 as seed ortholog is 100%.

Group of orthologs #1774. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:58

Q5K973              	100.00%		H3A2G5              	100.00%
Bootstrap support for Q5K973 as seed ortholog is 100%.
Bootstrap support for H3A2G5 as seed ortholog is 98%.

Group of orthologs #1775. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5K8X7              	100.00%		H3AAY7              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for H3AAY7 as seed ortholog is 100%.

Group of orthologs #1776. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5KDF4              	100.00%		H3AAW2              	100.00%
Bootstrap support for Q5KDF4 as seed ortholog is 100%.
Bootstrap support for H3AAW2 as seed ortholog is 100%.

Group of orthologs #1777. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5KM51              	100.00%		H3A473              	100.00%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for H3A473 as seed ortholog is 100%.

Group of orthologs #1778. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5KNL8              	100.00%		H3A792              	100.00%
Bootstrap support for Q5KNL8 as seed ortholog is 100%.
Bootstrap support for H3A792 as seed ortholog is 100%.

Group of orthologs #1779. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5KD03              	100.00%		H3ANJ4              	100.00%
Bootstrap support for Q5KD03 as seed ortholog is 100%.
Bootstrap support for H3ANJ4 as seed ortholog is 100%.

Group of orthologs #1780. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5KB06              	100.00%		H3AX79              	100.00%
Bootstrap support for Q5KB06 as seed ortholog is 100%.
Bootstrap support for H3AX79 as seed ortholog is 100%.

Group of orthologs #1781. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 L.chalumnae:102

Q5KL82              	100.00%		H3B739              	100.00%
Bootstrap support for Q5KL82 as seed ortholog is 100%.
Bootstrap support for H3B739 as seed ortholog is 100%.

Group of orthologs #1782. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KNI2              	100.00%		H3AB14              	100.00%
                    	       		H3A2I4              	28.38%
                    	       		H3B3D9              	22.97%
Bootstrap support for Q5KNI2 as seed ortholog is 100%.
Bootstrap support for H3AB14 as seed ortholog is 100%.

Group of orthologs #1783. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:36

Q5KMQ6              	100.00%		H3ARQ4              	100.00%
                    	       		H3BDW4              	54.14%
                    	       		H3A9R9              	29.46%
Bootstrap support for Q5KMQ6 as seed ortholog is 100%.
Bootstrap support for H3ARQ4 as seed ortholog is 84%.

Group of orthologs #1784. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KKG1              	100.00%		H2ZVK9              	100.00%
                    	       		H3BEH2              	29.87%
Bootstrap support for Q5KKG1 as seed ortholog is 100%.
Bootstrap support for H2ZVK9 as seed ortholog is 100%.

Group of orthologs #1785. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KE61              	100.00%		H3A2H7              	100.00%
                    	       		H3BAT1              	9.30%
Bootstrap support for Q5KE61 as seed ortholog is 100%.
Bootstrap support for H3A2H7 as seed ortholog is 100%.

Group of orthologs #1786. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KJH4              	100.00%		H3AM14              	100.00%
Q5KJH3              	14.99%		
Bootstrap support for Q5KJH4 as seed ortholog is 100%.
Bootstrap support for H3AM14 as seed ortholog is 100%.

Group of orthologs #1787. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

P0CO62              	100.00%		H3A269              	100.00%
Bootstrap support for P0CO62 as seed ortholog is 100%.
Bootstrap support for H3A269 as seed ortholog is 100%.

Group of orthologs #1788. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5K7Y3              	100.00%		H3A4L5              	100.00%
Bootstrap support for Q5K7Y3 as seed ortholog is 100%.
Bootstrap support for H3A4L5 as seed ortholog is 100%.

Group of orthologs #1789. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KEW2              	100.00%		H3A893              	100.00%
Bootstrap support for Q5KEW2 as seed ortholog is 100%.
Bootstrap support for H3A893 as seed ortholog is 100%.

Group of orthologs #1790. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KDD0              	100.00%		H3AIJ0              	100.00%
Bootstrap support for Q5KDD0 as seed ortholog is 100%.
Bootstrap support for H3AIJ0 as seed ortholog is 100%.

Group of orthologs #1791. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5K7N6              	100.00%		H3ASN4              	100.00%
Bootstrap support for Q5K7N6 as seed ortholog is 100%.
Bootstrap support for H3ASN4 as seed ortholog is 100%.

Group of orthologs #1792. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:37

Q5KGG8              	100.00%		H3ATL3              	100.00%
Bootstrap support for Q5KGG8 as seed ortholog is 100%.
Bootstrap support for H3ATL3 as seed ortholog is 45%.
Alternative seed ortholog is H3B7N3 (37 bits away from this cluster)

Group of orthologs #1793. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 L.chalumnae:101

Q5KE85              	100.00%		H3B1B1              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for H3B1B1 as seed ortholog is 100%.

Group of orthologs #1794. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:100

Q07801              	100.00%		H3ADL5              	100.00%
                    	       		H3AFF7              	13.44%
Bootstrap support for Q07801 as seed ortholog is 100%.
Bootstrap support for H3ADL5 as seed ortholog is 100%.

Group of orthologs #1795. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:100

Q5KLG3              	100.00%		H3A4E1              	100.00%
                    	       		M3XGN6              	62.31%
Bootstrap support for Q5KLG3 as seed ortholog is 100%.
Bootstrap support for H3A4E1 as seed ortholog is 100%.

Group of orthologs #1796. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:43

Q5K8Y0              	100.00%		H3AS02              	100.00%
                    	       		H3A7T6              	77.85%
Bootstrap support for Q5K8Y0 as seed ortholog is 100%.
Bootstrap support for H3AS02 as seed ortholog is 85%.

Group of orthologs #1797. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:100

Q5KJ18              	100.00%		H2ZZE0              	100.00%
Bootstrap support for Q5KJ18 as seed ortholog is 100%.
Bootstrap support for H2ZZE0 as seed ortholog is 100%.

Group of orthologs #1798. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:100

Q5KPG4              	100.00%		H3B869              	100.00%
Bootstrap support for Q5KPG4 as seed ortholog is 100%.
Bootstrap support for H3B869 as seed ortholog is 100%.

Group of orthologs #1799. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 L.chalumnae:100

Q5KKY4              	100.00%		H3BEP6              	100.00%
Bootstrap support for Q5KKY4 as seed ortholog is 100%.
Bootstrap support for H3BEP6 as seed ortholog is 100%.

Group of orthologs #1800. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KB73              	100.00%		H2ZSQ6              	100.00%
                    	       		H3AN68              	33.30%
                    	       		H3B237              	21.22%
Bootstrap support for Q5KB73 as seed ortholog is 100%.
Bootstrap support for H2ZSQ6 as seed ortholog is 100%.

Group of orthologs #1801. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5K8F2              	100.00%		H3A2C6              	100.00%
                    	       		H2ZT03              	47.26%
                    	       		H2ZYR4              	45.50%
Bootstrap support for Q5K8F2 as seed ortholog is 100%.
Bootstrap support for H3A2C6 as seed ortholog is 100%.

Group of orthologs #1802. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:3 L.chalumnae:47

Q5KDS1              	100.00%		H3B6K3              	100.00%
Q5KCB6              	72.84%		
Q5KKB5              	42.03%		
Bootstrap support for Q5KDS1 as seed ortholog is 43%.
Alternative seed ortholog is Q5KIP0 (3 bits away from this cluster)
Bootstrap support for H3B6K3 as seed ortholog is 93%.

Group of orthologs #1803. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

P0CO30              	100.00%		H3A622              	100.00%
                    	       		M3XGL7              	55.14%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for H3A622 as seed ortholog is 100%.

Group of orthologs #1804. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5K9E5              	100.00%		H3ARE2              	100.00%
                    	       		H3ABV3              	29.55%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for H3ARE2 as seed ortholog is 100%.

Group of orthologs #1805. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KKA7              	100.00%		H3AIE1              	100.00%
Q5KKA8              	40.29%		
Bootstrap support for Q5KKA7 as seed ortholog is 100%.
Bootstrap support for H3AIE1 as seed ortholog is 100%.

Group of orthologs #1806. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KFL5              	100.00%		H3AX36              	100.00%
                    	       		H3AIC5              	47.37%
Bootstrap support for Q5KFL5 as seed ortholog is 100%.
Bootstrap support for H3AX36 as seed ortholog is 100%.

Group of orthologs #1807. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

P0CM42              	100.00%		H3A2N1              	100.00%
Bootstrap support for P0CM42 as seed ortholog is 100%.
Bootstrap support for H3A2N1 as seed ortholog is 100%.

Group of orthologs #1808. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:38

Q5KA76              	100.00%		H3A641              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for H3A641 as seed ortholog is 85%.

Group of orthologs #1809. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KLZ6              	100.00%		H2ZWA8              	100.00%
Bootstrap support for Q5KLZ6 as seed ortholog is 100%.
Bootstrap support for H2ZWA8 as seed ortholog is 100%.

Group of orthologs #1810. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KEZ3              	100.00%		H3A3S5              	100.00%
Bootstrap support for Q5KEZ3 as seed ortholog is 100%.
Bootstrap support for H3A3S5 as seed ortholog is 100%.

Group of orthologs #1811. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KDY6              	100.00%		H3A8E0              	100.00%
Bootstrap support for Q5KDY6 as seed ortholog is 100%.
Bootstrap support for H3A8E0 as seed ortholog is 100%.

Group of orthologs #1812. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KBR2              	100.00%		H3AIG5              	100.00%
Bootstrap support for Q5KBR2 as seed ortholog is 100%.
Bootstrap support for H3AIG5 as seed ortholog is 100%.

Group of orthologs #1813. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:18

Q5KD71              	100.00%		H3ARY8              	100.00%
Bootstrap support for Q5KD71 as seed ortholog is 100%.
Bootstrap support for H3ARY8 as seed ortholog is 96%.

Group of orthologs #1814. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5KC00              	100.00%		H3AUX9              	100.00%
Bootstrap support for Q5KC00 as seed ortholog is 100%.
Bootstrap support for H3AUX9 as seed ortholog is 100%.

Group of orthologs #1815. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 L.chalumnae:99

Q5K753              	100.00%		H3B9G9              	100.00%
Bootstrap support for Q5K753 as seed ortholog is 100%.
Bootstrap support for H3B9G9 as seed ortholog is 100%.

Group of orthologs #1816. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:47

Q5KKK4              	100.00%		H3ASW5              	100.00%
                    	       		H3B547              	46.07%
                    	       		H3AEB8              	20.22%
Bootstrap support for Q5KKK4 as seed ortholog is 100%.
Bootstrap support for H3ASW5 as seed ortholog is 94%.

Group of orthologs #1817. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:98

Q5KLV6              	100.00%		H3AR29              	100.00%
                    	       		H3A4D5              	54.85%
Bootstrap support for Q5KLV6 as seed ortholog is 100%.
Bootstrap support for H3AR29 as seed ortholog is 100%.

Group of orthologs #1818. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:98

Q5KHN8              	100.00%		H2ZZE5              	100.00%
Bootstrap support for Q5KHN8 as seed ortholog is 100%.
Bootstrap support for H2ZZE5 as seed ortholog is 100%.

Group of orthologs #1819. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:98

Q5KE91              	100.00%		H3A475              	100.00%
Bootstrap support for Q5KE91 as seed ortholog is 100%.
Bootstrap support for H3A475 as seed ortholog is 100%.

Group of orthologs #1820. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:98

Q5KL84              	100.00%		H3A3A7              	100.00%
Bootstrap support for Q5KL84 as seed ortholog is 100%.
Bootstrap support for H3A3A7 as seed ortholog is 100%.

Group of orthologs #1821. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:98

Q5KL91              	100.00%		H3A573              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for H3A573 as seed ortholog is 100%.

Group of orthologs #1822. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 L.chalumnae:98

Q5K8A9              	100.00%		H3AS06              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 100%.
Bootstrap support for H3AS06 as seed ortholog is 100%.

Group of orthologs #1823. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5K8A3              	100.00%		H3AGI9              	100.00%
                    	       		H3AYP1              	10.56%
Bootstrap support for Q5K8A3 as seed ortholog is 100%.
Bootstrap support for H3AGI9 as seed ortholog is 100%.

Group of orthologs #1824. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KLN7              	100.00%		H3A4L3              	100.00%
Q5KLN8              	100.00%		
Bootstrap support for Q5KLN7 as seed ortholog is 100%.
Bootstrap support for Q5KLN8 as seed ortholog is 100%.
Bootstrap support for H3A4L3 as seed ortholog is 100%.

Group of orthologs #1825. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KFC6              	100.00%		H3AP95              	100.00%
                    	       		H2ZW99              	40.87%
Bootstrap support for Q5KFC6 as seed ortholog is 100%.
Bootstrap support for H3AP95 as seed ortholog is 100%.

Group of orthologs #1826. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5K7Q6              	100.00%		H3BDJ7              	100.00%
Q5K6X7              	5.37%		
Bootstrap support for Q5K7Q6 as seed ortholog is 100%.
Bootstrap support for H3BDJ7 as seed ortholog is 100%.

Group of orthologs #1827. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5K8K2              	100.00%		H3AJI9              	100.00%
Bootstrap support for Q5K8K2 as seed ortholog is 100%.
Bootstrap support for H3AJI9 as seed ortholog is 100%.

Group of orthologs #1828. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:31 L.chalumnae:97

Q5KL09              	100.00%		H3AHF4              	100.00%
Bootstrap support for Q5KL09 as seed ortholog is 77%.
Bootstrap support for H3AHF4 as seed ortholog is 100%.

Group of orthologs #1829. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KCS9              	100.00%		H3AV11              	100.00%
Bootstrap support for Q5KCS9 as seed ortholog is 100%.
Bootstrap support for H3AV11 as seed ortholog is 100%.

Group of orthologs #1830. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

P0CM78              	100.00%		H3BAT4              	100.00%
Bootstrap support for P0CM78 as seed ortholog is 100%.
Bootstrap support for H3BAT4 as seed ortholog is 100%.

Group of orthologs #1831. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KCV8              	100.00%		H3B9V9              	100.00%
Bootstrap support for Q5KCV8 as seed ortholog is 100%.
Bootstrap support for H3B9V9 as seed ortholog is 100%.

Group of orthologs #1832. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KC58              	100.00%		H3BFS7              	100.00%
Bootstrap support for Q5KC58 as seed ortholog is 100%.
Bootstrap support for H3BFS7 as seed ortholog is 100%.

Group of orthologs #1833. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KL70              	100.00%		H3BB30              	100.00%
Bootstrap support for Q5KL70 as seed ortholog is 100%.
Bootstrap support for H3BB30 as seed ortholog is 100%.

Group of orthologs #1834. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 L.chalumnae:97

Q5KKQ0              	100.00%		H3BDW3              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for H3BDW3 as seed ortholog is 100%.

Group of orthologs #1835. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5KHN2              	100.00%		M3XJB1              	30.03%
Q5KM91              	100.00%		M3XKF0              	100.00%
                    	       		H3BHK7              	22.41%
                    	       		H3BGY9              	17.99%
Bootstrap support for Q5KHN2 as seed ortholog is 100%.
Bootstrap support for Q5KM91 as seed ortholog is 100%.
Bootstrap support for M3XKF0 as seed ortholog is 100%.

Group of orthologs #1836. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5KMP1              	100.00%		H3AQH1              	100.00%
                    	       		H2ZWU0              	52.49%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for H3AQH1 as seed ortholog is 100%.

Group of orthologs #1837. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5KPF0              	100.00%		H3BGA6              	100.00%
                    	       		H3A5W4              	56.35%
Bootstrap support for Q5KPF0 as seed ortholog is 100%.
Bootstrap support for H3BGA6 as seed ortholog is 100%.

Group of orthologs #1838. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5K6X4              	100.00%		H3ABL3              	100.00%
Bootstrap support for Q5K6X4 as seed ortholog is 100%.
Bootstrap support for H3ABL3 as seed ortholog is 100%.

Group of orthologs #1839. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5K9X2              	100.00%		H3AIR8              	100.00%
Bootstrap support for Q5K9X2 as seed ortholog is 100%.
Bootstrap support for H3AIR8 as seed ortholog is 100%.

Group of orthologs #1840. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

P0CO84              	100.00%		H3AZ60              	100.00%
Bootstrap support for P0CO84 as seed ortholog is 100%.
Bootstrap support for H3AZ60 as seed ortholog is 100%.

Group of orthologs #1841. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5K8A6              	100.00%		H3B2Y9              	100.00%
Bootstrap support for Q5K8A6 as seed ortholog is 100%.
Bootstrap support for H3B2Y9 as seed ortholog is 100%.

Group of orthologs #1842. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5K900              	100.00%		H3B7F4              	100.00%
Bootstrap support for Q5K900 as seed ortholog is 100%.
Bootstrap support for H3B7F4 as seed ortholog is 100%.

Group of orthologs #1843. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 L.chalumnae:96

Q5KBG4              	100.00%		H3B577              	100.00%
Bootstrap support for Q5KBG4 as seed ortholog is 100%.
Bootstrap support for H3B577 as seed ortholog is 100%.

Group of orthologs #1844. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:95

P0CN16              	100.00%		H3AGB8              	100.00%
                    	       		H2ZVX0              	45.94%
Bootstrap support for P0CN16 as seed ortholog is 100%.
Bootstrap support for H3AGB8 as seed ortholog is 100%.

Group of orthologs #1845. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:95

Q5KM67              	100.00%		H3B4W3              	100.00%
                    	       		H3A677              	16.45%
Bootstrap support for Q5KM67 as seed ortholog is 100%.
Bootstrap support for H3B4W3 as seed ortholog is 100%.

Group of orthologs #1846. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:95

Q5KBD5              	100.00%		H3AXF9              	100.00%
Bootstrap support for Q5KBD5 as seed ortholog is 100%.
Bootstrap support for H3AXF9 as seed ortholog is 100%.

Group of orthologs #1847. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:1

Q5KP88              	100.00%		H3AJA2              	100.00%
Bootstrap support for Q5KP88 as seed ortholog is 100%.
Bootstrap support for H3AJA2 as seed ortholog is 47%.
Alternative seed ortholog is H3A8T9 (1 bits away from this cluster)

Group of orthologs #1848. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 L.chalumnae:95

P0CS74              	100.00%		H3BHG0              	100.00%
Bootstrap support for P0CS74 as seed ortholog is 100%.
Bootstrap support for H3BHG0 as seed ortholog is 100%.

Group of orthologs #1849. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5K965              	100.00%		H3A5V9              	100.00%
Q5KC43              	55.81%		H3B3Y3              	40.46%
                    	       		H3B5U6              	16.42%
                    	       		H2ZS15              	16.12%
                    	       		H2ZUG9              	15.75%
                    	       		H3AZG6              	15.75%
                    	       		H3B7U0              	15.16%
                    	       		H3AQK7              	9.39%
                    	       		H2ZWK4              	7.10%
Bootstrap support for Q5K965 as seed ortholog is 100%.
Bootstrap support for H3A5V9 as seed ortholog is 100%.

Group of orthologs #1850. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5K8B5              	100.00%		H3AVC8              	100.00%
                    	       		H3AUZ9              	21.34%
                    	       		H3ABF6              	20.55%
                    	       		M3XL43              	18.98%
Bootstrap support for Q5K8B5 as seed ortholog is 100%.
Bootstrap support for H3AVC8 as seed ortholog is 100%.

Group of orthologs #1851. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:26 L.chalumnae:94

Q5KK55              	100.00%		H2ZY23              	100.00%
                    	       		M3XI97              	12.61%
Bootstrap support for Q5KK55 as seed ortholog is 92%.
Bootstrap support for H2ZY23 as seed ortholog is 100%.

Group of orthologs #1852. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5KK86              	100.00%		H3ALB9              	100.00%
                    	       		H3B6D6              	35.54%
Bootstrap support for Q5KK86 as seed ortholog is 100%.
Bootstrap support for H3ALB9 as seed ortholog is 100%.

Group of orthologs #1853. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5KDU9              	100.00%		H3AUG6              	100.00%
                    	       		H3BED0              	8.57%
Bootstrap support for Q5KDU9 as seed ortholog is 100%.
Bootstrap support for H3AUG6 as seed ortholog is 100%.

Group of orthologs #1854. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:7

Q5KM16              	100.00%		H3APE6              	100.00%
                    	       		H2ZV00              	12.63%
Bootstrap support for Q5KM16 as seed ortholog is 100%.
Bootstrap support for H3APE6 as seed ortholog is 57%.
Alternative seed ortholog is H3B794 (7 bits away from this cluster)

Group of orthologs #1855. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5KB50              	100.00%		H3B104              	100.00%
                    	       		H3AJU6              	30.92%
Bootstrap support for Q5KB50 as seed ortholog is 100%.
Bootstrap support for H3B104 as seed ortholog is 100%.

Group of orthologs #1856. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:13

P0CM60              	100.00%		H3A300              	100.00%
Bootstrap support for P0CM60 as seed ortholog is 100%.
Bootstrap support for H3A300 as seed ortholog is 62%.
Alternative seed ortholog is H3A9C3 (13 bits away from this cluster)

Group of orthologs #1857. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5KP20              	100.00%		H3AGW2              	100.00%
Bootstrap support for Q5KP20 as seed ortholog is 100%.
Bootstrap support for H3AGW2 as seed ortholog is 100%.

Group of orthologs #1858. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 L.chalumnae:94

Q5K845              	100.00%		H3B3V8              	100.00%
Bootstrap support for Q5K845 as seed ortholog is 100%.
Bootstrap support for H3B3V8 as seed ortholog is 100%.

Group of orthologs #1859. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5K970              	100.00%		H3A8C5              	100.00%
                    	       		H3AJ10              	47.33%
Bootstrap support for Q5K970 as seed ortholog is 100%.
Bootstrap support for H3A8C5 as seed ortholog is 100%.

Group of orthologs #1860. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5KIY8              	100.00%		H3AC43              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for H3AC43 as seed ortholog is 100%.

Group of orthologs #1861. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5KMJ0              	100.00%		H3A9J4              	100.00%
Bootstrap support for Q5KMJ0 as seed ortholog is 100%.
Bootstrap support for H3A9J4 as seed ortholog is 100%.

Group of orthologs #1862. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5KFH7              	100.00%		H3ASE4              	100.00%
Bootstrap support for Q5KFH7 as seed ortholog is 100%.
Bootstrap support for H3ASE4 as seed ortholog is 100%.

Group of orthologs #1863. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5KC59              	100.00%		H3B6X9              	100.00%
Bootstrap support for Q5KC59 as seed ortholog is 100%.
Bootstrap support for H3B6X9 as seed ortholog is 100%.

Group of orthologs #1864. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

P0CR84              	100.00%		H3BF53              	100.00%
Bootstrap support for P0CR84 as seed ortholog is 100%.
Bootstrap support for H3BF53 as seed ortholog is 100%.

Group of orthologs #1865. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5KP02              	100.00%		H3B5Q5              	100.00%
Bootstrap support for Q5KP02 as seed ortholog is 100%.
Bootstrap support for H3B5Q5 as seed ortholog is 100%.

Group of orthologs #1866. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 L.chalumnae:93

Q5KNA8              	100.00%		H3B856              	100.00%
Bootstrap support for Q5KNA8 as seed ortholog is 100%.
Bootstrap support for H3B856 as seed ortholog is 100%.

Group of orthologs #1867. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:5

Q5KLB1              	100.00%		H3A2B9              	100.00%
                    	       		H3ACU3              	100.00%
                    	       		H2ZYB2              	40.39%
                    	       		H3AAE2              	38.63%
                    	       		H3B1Y4              	34.56%
                    	       		H2ZYU3              	34.56%
Bootstrap support for Q5KLB1 as seed ortholog is 100%.
Bootstrap support for H3A2B9 as seed ortholog is 54%.
Alternative seed ortholog is H3A738 (5 bits away from this cluster)
Bootstrap support for H3ACU3 as seed ortholog is 53%.
Alternative seed ortholog is H3A738 (5 bits away from this cluster)

Group of orthologs #1868. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KI51              	100.00%		H3AIG3              	100.00%
                    	       		H3AXX2              	73.86%
Bootstrap support for Q5KI51 as seed ortholog is 100%.
Bootstrap support for H3AIG3 as seed ortholog is 100%.

Group of orthologs #1869. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:6

P0CR64              	100.00%		H3B821              	100.00%
                    	       		H2ZYC1              	37.66%
Bootstrap support for P0CR64 as seed ortholog is 100%.
Bootstrap support for H3B821 as seed ortholog is 64%.
Alternative seed ortholog is H3AH56 (6 bits away from this cluster)

Group of orthologs #1870. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KCI2              	100.00%		H3B8Z5              	100.00%
                    	       		H3AZB8              	41.36%
Bootstrap support for Q5KCI2 as seed ortholog is 100%.
Bootstrap support for H3B8Z5 as seed ortholog is 100%.

Group of orthologs #1871. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:45

Q5KF36              	100.00%		M3XGG2              	100.00%
                    	       		M3XIR5              	56.22%
Bootstrap support for Q5KF36 as seed ortholog is 100%.
Bootstrap support for M3XGG2 as seed ortholog is 95%.

Group of orthologs #1872. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KBY4              	100.00%		H2ZT34              	100.00%
Bootstrap support for Q5KBY4 as seed ortholog is 100%.
Bootstrap support for H2ZT34 as seed ortholog is 100%.

Group of orthologs #1873. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KEH1              	100.00%		H3A1G4              	100.00%
Bootstrap support for Q5KEH1 as seed ortholog is 100%.
Bootstrap support for H3A1G4 as seed ortholog is 100%.

Group of orthologs #1874. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KIT8              	100.00%		H3A0F6              	100.00%
Bootstrap support for Q5KIT8 as seed ortholog is 100%.
Bootstrap support for H3A0F6 as seed ortholog is 100%.

Group of orthologs #1875. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KL57              	100.00%		H3A569              	100.00%
Bootstrap support for Q5KL57 as seed ortholog is 100%.
Bootstrap support for H3A569 as seed ortholog is 100%.

Group of orthologs #1876. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KPL4              	100.00%		H3A9N9              	100.00%
Bootstrap support for Q5KPL4 as seed ortholog is 100%.
Bootstrap support for H3A9N9 as seed ortholog is 100%.

Group of orthologs #1877. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KKF2              	100.00%		H3AGN9              	100.00%
Bootstrap support for Q5KKF2 as seed ortholog is 100%.
Bootstrap support for H3AGN9 as seed ortholog is 100%.

Group of orthologs #1878. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KJ70              	100.00%		H3AXC5              	100.00%
Bootstrap support for Q5KJ70 as seed ortholog is 100%.
Bootstrap support for H3AXC5 as seed ortholog is 100%.

Group of orthologs #1879. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KEE1              	100.00%		H3B5P1              	100.00%
Bootstrap support for Q5KEE1 as seed ortholog is 100%.
Bootstrap support for H3B5P1 as seed ortholog is 100%.

Group of orthologs #1880. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 L.chalumnae:92

Q5KJY3              	100.00%		M3XJB8              	100.00%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for M3XJB8 as seed ortholog is 100%.

Group of orthologs #1881. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5K856              	100.00%		H3B008              	100.00%
Q5KLZ1              	8.01%		H3AG31              	47.61%
Bootstrap support for Q5K856 as seed ortholog is 100%.
Bootstrap support for H3B008 as seed ortholog is 100%.

Group of orthologs #1882. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:46

Q5KBN1              	100.00%		H3B264              	100.00%
Q5KEW1              	27.47%		
Bootstrap support for Q5KBN1 as seed ortholog is 100%.
Bootstrap support for H3B264 as seed ortholog is 73%.
Alternative seed ortholog is H3A5H5 (46 bits away from this cluster)

Group of orthologs #1883. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5K7D8              	100.00%		H2ZXF1              	100.00%
Bootstrap support for Q5K7D8 as seed ortholog is 100%.
Bootstrap support for H2ZXF1 as seed ortholog is 100%.

Group of orthologs #1884. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KEE4              	100.00%		H3A014              	100.00%
Bootstrap support for Q5KEE4 as seed ortholog is 100%.
Bootstrap support for H3A014 as seed ortholog is 100%.

Group of orthologs #1885. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

P0CR24              	100.00%		H3ADW1              	100.00%
Bootstrap support for P0CR24 as seed ortholog is 100%.
Bootstrap support for H3ADW1 as seed ortholog is 100%.

Group of orthologs #1886. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KC98              	100.00%		H3A814              	100.00%
Bootstrap support for Q5KC98 as seed ortholog is 100%.
Bootstrap support for H3A814 as seed ortholog is 100%.

Group of orthologs #1887. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:9

Q5KI32              	100.00%		H3A557              	100.00%
Bootstrap support for Q5KI32 as seed ortholog is 100%.
Bootstrap support for H3A557 as seed ortholog is 52%.
Alternative seed ortholog is H3AXL1 (9 bits away from this cluster)

Group of orthologs #1888. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5K8W3              	100.00%		H3AHQ0              	100.00%
Bootstrap support for Q5K8W3 as seed ortholog is 100%.
Bootstrap support for H3AHQ0 as seed ortholog is 100%.

Group of orthologs #1889. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KID6              	100.00%		H3AHG9              	100.00%
Bootstrap support for Q5KID6 as seed ortholog is 100%.
Bootstrap support for H3AHG9 as seed ortholog is 100%.

Group of orthologs #1890. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KB94              	100.00%		H3AQI2              	100.00%
Bootstrap support for Q5KB94 as seed ortholog is 100%.
Bootstrap support for H3AQI2 as seed ortholog is 100%.

Group of orthologs #1891. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

P0CM90              	100.00%		H3BAR7              	100.00%
Bootstrap support for P0CM90 as seed ortholog is 100%.
Bootstrap support for H3BAR7 as seed ortholog is 100%.

Group of orthologs #1892. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KGT2              	100.00%		H3B243              	100.00%
Bootstrap support for Q5KGT2 as seed ortholog is 100%.
Bootstrap support for H3B243 as seed ortholog is 100%.

Group of orthologs #1893. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KKH4              	100.00%		H3B1E1              	100.00%
Bootstrap support for Q5KKH4 as seed ortholog is 100%.
Bootstrap support for H3B1E1 as seed ortholog is 100%.

Group of orthologs #1894. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

P0CO34              	100.00%		H3BHR7              	100.00%
Bootstrap support for P0CO34 as seed ortholog is 100%.
Bootstrap support for H3BHR7 as seed ortholog is 100%.

Group of orthologs #1895. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:48 L.chalumnae:91

Q5KC84              	100.00%		H3BEQ3              	100.00%
Bootstrap support for Q5KC84 as seed ortholog is 94%.
Bootstrap support for H3BEQ3 as seed ortholog is 100%.

Group of orthologs #1896. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KFI5              	100.00%		H3BDL0              	100.00%
Bootstrap support for Q5KFI5 as seed ortholog is 100%.
Bootstrap support for H3BDL0 as seed ortholog is 100%.

Group of orthologs #1897. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 L.chalumnae:91

Q5KI10              	100.00%		H3BHR6              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for H3BHR6 as seed ortholog is 100%.

Group of orthologs #1898. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 L.chalumnae:90

Q5K7K2              	100.00%		H3AWE9              	100.00%
Q5KDY8              	98.66%		H3A4N8              	28.44%
Q5KCL6              	94.40%		H3A810              	19.39%
Q5KL71              	86.01%		
Q5K820              	12.65%		
Bootstrap support for Q5K7K2 as seed ortholog is 100%.
Bootstrap support for H3AWE9 as seed ortholog is 100%.

Group of orthologs #1899. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 L.chalumnae:90

Q5KPM7              	100.00%		H3A7P4              	100.00%
                    	       		H3ASS2              	14.72%
Bootstrap support for Q5KPM7 as seed ortholog is 100%.
Bootstrap support for H3A7P4 as seed ortholog is 100%.

Group of orthologs #1900. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 L.chalumnae:9

Q5KEY9              	100.00%		H3B7U5              	100.00%
                    	       		H3B5S0              	36.01%
Bootstrap support for Q5KEY9 as seed ortholog is 100%.
Bootstrap support for H3B7U5 as seed ortholog is 61%.
Alternative seed ortholog is M3XK02 (9 bits away from this cluster)

Group of orthologs #1901. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 L.chalumnae:90

Q5KAN8              	100.00%		M3XJ92              	100.00%
Q5KP67              	6.98%		
Bootstrap support for Q5KAN8 as seed ortholog is 100%.
Bootstrap support for M3XJ92 as seed ortholog is 100%.

Group of orthologs #1902. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 L.chalumnae:90

P0CN54              	100.00%		H3BH15              	100.00%
Bootstrap support for P0CN54 as seed ortholog is 100%.
Bootstrap support for H3BH15 as seed ortholog is 100%.

Group of orthologs #1903. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 L.chalumnae:90

P0CQ38              	100.00%		M3XKW9              	100.00%
Bootstrap support for P0CQ38 as seed ortholog is 100%.
Bootstrap support for M3XKW9 as seed ortholog is 100%.

Group of orthologs #1904. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 L.chalumnae:89

Q5KC66              	100.00%		H3B5J0              	100.00%
                    	       		H3ADR3              	41.61%
Bootstrap support for Q5KC66 as seed ortholog is 100%.
Bootstrap support for H3B5J0 as seed ortholog is 100%.

Group of orthologs #1905. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 L.chalumnae:89

Q5KNR5              	100.00%		H3A610              	100.00%
Bootstrap support for Q5KNR5 as seed ortholog is 100%.
Bootstrap support for H3A610 as seed ortholog is 100%.

Group of orthologs #1906. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 L.chalumnae:89

Q5KGR9              	100.00%		H3AWX0              	100.00%
Bootstrap support for Q5KGR9 as seed ortholog is 100%.
Bootstrap support for H3AWX0 as seed ortholog is 100%.

Group of orthologs #1907. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 L.chalumnae:89

Q5KJC8              	100.00%		H3B004              	100.00%
Bootstrap support for Q5KJC8 as seed ortholog is 100%.
Bootstrap support for H3B004 as seed ortholog is 100%.

Group of orthologs #1908. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 L.chalumnae:89

Q5KPA4              	100.00%		H3AYD6              	100.00%
Bootstrap support for Q5KPA4 as seed ortholog is 100%.
Bootstrap support for H3AYD6 as seed ortholog is 100%.

Group of orthologs #1909. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:88

Q5KLV4              	100.00%		H3A055              	100.00%
Bootstrap support for Q5KLV4 as seed ortholog is 100%.
Bootstrap support for H3A055 as seed ortholog is 100%.

Group of orthologs #1910. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:88

Q5KCL2              	100.00%		H3AIA8              	100.00%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for H3AIA8 as seed ortholog is 100%.

Group of orthologs #1911. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:88

Q5KMF3              	100.00%		H3AA50              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 100%.
Bootstrap support for H3AA50 as seed ortholog is 100%.

Group of orthologs #1912. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:88

Q5KLL3              	100.00%		H3AUW2              	100.00%
Bootstrap support for Q5KLL3 as seed ortholog is 90%.
Bootstrap support for H3AUW2 as seed ortholog is 100%.

Group of orthologs #1913. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 L.chalumnae:88

Q5KM48              	100.00%		H3B6N8              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 100%.
Bootstrap support for H3B6N8 as seed ortholog is 100%.

Group of orthologs #1914. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:21

Q5KK19              	100.00%		H3AS13              	100.00%
                    	       		H3AM34              	38.49%
                    	       		H3APN0              	35.84%
                    	       		H3AF76              	31.28%
                    	       		H3ANT2              	25.56%
                    	       		H3AT94              	24.60%
                    	       		H3B0T1              	18.77%
                    	       		H3AT25              	17.50%
                    	       		H3B1Z3              	16.44%
                    	       		H3B9S0              	16.12%
                    	       		H3BBB2              	16.01%
                    	       		H2ZSH7              	10.50%
                    	       		H2ZVK5              	9.65%
                    	       		H3A784              	8.59%
Bootstrap support for Q5KK19 as seed ortholog is 100%.
Bootstrap support for H3AS13 as seed ortholog is 60%.
Alternative seed ortholog is H3BA11 (21 bits away from this cluster)

Group of orthologs #1915. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KKY6              	100.00%		H3A4P4              	100.00%
                    	       		H3B1U2              	11.12%
                    	       		H3A9W6              	9.14%
                    	       		H3AFB2              	6.17%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for H3A4P4 as seed ortholog is 100%.

Group of orthologs #1916. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KHB4              	100.00%		H3ANF1              	100.00%
                    	       		H3A8I4              	49.10%
                    	       		H2ZSS4              	6.94%
                    	       		H3AA10              	5.74%
Bootstrap support for Q5KHB4 as seed ortholog is 100%.
Bootstrap support for H3ANF1 as seed ortholog is 100%.

Group of orthologs #1917. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KE06              	100.00%		H3BBM2              	100.00%
                    	       		H2ZUP7              	37.18%
                    	       		H3A5J2              	31.49%
                    	       		H3ACF6              	24.84%
Bootstrap support for Q5KE06 as seed ortholog is 100%.
Bootstrap support for H3BBM2 as seed ortholog is 100%.

Group of orthologs #1918. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KFF8              	100.00%		H3ATV1              	100.00%
                    	       		H3A0Q3              	15.46%
Bootstrap support for Q5KFF8 as seed ortholog is 100%.
Bootstrap support for H3ATV1 as seed ortholog is 100%.

Group of orthologs #1919. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

P0CR20              	100.00%		H2ZXJ0              	100.00%
Bootstrap support for P0CR20 as seed ortholog is 100%.
Bootstrap support for H2ZXJ0 as seed ortholog is 100%.

Group of orthologs #1920. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KKZ0              	100.00%		H2ZWC1              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 100%.
Bootstrap support for H2ZWC1 as seed ortholog is 100%.

Group of orthologs #1921. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KCE2              	100.00%		H3ALM6              	100.00%
Bootstrap support for Q5KCE2 as seed ortholog is 100%.
Bootstrap support for H3ALM6 as seed ortholog is 100%.

Group of orthologs #1922. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KMK6              	100.00%		H3ADG6              	100.00%
Bootstrap support for Q5KMK6 as seed ortholog is 100%.
Bootstrap support for H3ADG6 as seed ortholog is 100%.

Group of orthologs #1923. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KFF9              	100.00%		H3AUJ1              	100.00%
Bootstrap support for Q5KFF9 as seed ortholog is 100%.
Bootstrap support for H3AUJ1 as seed ortholog is 100%.

Group of orthologs #1924. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:6 L.chalumnae:87

Q5KJZ1              	100.00%		H3B281              	100.00%
Bootstrap support for Q5KJZ1 as seed ortholog is 57%.
Alternative seed ortholog is Q5KLT4 (6 bits away from this cluster)
Bootstrap support for H3B281 as seed ortholog is 100%.

Group of orthologs #1925. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 L.chalumnae:87

Q5KA95              	100.00%		M3XIL1              	100.00%
Bootstrap support for Q5KA95 as seed ortholog is 100%.
Bootstrap support for M3XIL1 as seed ortholog is 100%.

Group of orthologs #1926. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:5

Q5KMS8              	100.00%		H2ZTH2              	100.00%
                    	       		H3BHV8              	29.87%
                    	       		H3ABG3              	15.83%
                    	       		H3AG96              	14.57%
Bootstrap support for Q5KMS8 as seed ortholog is 100%.
Bootstrap support for H2ZTH2 as seed ortholog is 49%.
Alternative seed ortholog is H3A3Y2 (5 bits away from this cluster)

Group of orthologs #1927. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

P0CO24              	100.00%		H3AD42              	100.00%
                    	       		H3A226              	60.45%
                    	       		H3B5J1              	54.87%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for H3AD42 as seed ortholog is 100%.

Group of orthologs #1928. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:29

Q5KJ09              	100.00%		H3ACH4              	100.00%
                    	       		H3AZ37              	48.92%
                    	       		H3A215              	47.30%
Bootstrap support for Q5KJ09 as seed ortholog is 100%.
Bootstrap support for H3ACH4 as seed ortholog is 75%.

Group of orthologs #1929. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KJM9              	100.00%		H3A620              	100.00%
                    	       		H3AFC7              	39.60%
Bootstrap support for Q5KJM9 as seed ortholog is 100%.
Bootstrap support for H3A620 as seed ortholog is 100%.

Group of orthologs #1930. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KG76              	100.00%		H3AA52              	100.00%
                    	       		H3AIM6              	59.29%
Bootstrap support for Q5KG76 as seed ortholog is 100%.
Bootstrap support for H3AA52 as seed ortholog is 100%.

Group of orthologs #1931. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5K7W0              	100.00%		H3AUE5              	100.00%
                    	       		H3BIH5              	60.07%
Bootstrap support for Q5K7W0 as seed ortholog is 100%.
Bootstrap support for H3AUE5 as seed ortholog is 100%.

Group of orthologs #1932. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KE31              	100.00%		H3BHB4              	100.00%
Q5KB15              	28.42%		
Bootstrap support for Q5KE31 as seed ortholog is 100%.
Bootstrap support for H3BHB4 as seed ortholog is 100%.

Group of orthologs #1933. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

P0CM28              	100.00%		H2ZVM5              	100.00%
Bootstrap support for P0CM28 as seed ortholog is 100%.
Bootstrap support for H2ZVM5 as seed ortholog is 100%.

Group of orthologs #1934. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KD61              	100.00%		H3A287              	100.00%
Bootstrap support for Q5KD61 as seed ortholog is 100%.
Bootstrap support for H3A287 as seed ortholog is 100%.

Group of orthologs #1935. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KJ49              	100.00%		H2ZYB4              	100.00%
Bootstrap support for Q5KJ49 as seed ortholog is 100%.
Bootstrap support for H2ZYB4 as seed ortholog is 100%.

Group of orthologs #1936. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KIE2              	100.00%		H3ASH2              	100.00%
Bootstrap support for Q5KIE2 as seed ortholog is 100%.
Bootstrap support for H3ASH2 as seed ortholog is 100%.

Group of orthologs #1937. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KNG8              	100.00%		H3B068              	100.00%
Bootstrap support for Q5KNG8 as seed ortholog is 100%.
Bootstrap support for H3B068 as seed ortholog is 100%.

Group of orthologs #1938. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 L.chalumnae:86

Q5KLY6              	100.00%		M3XGZ9              	100.00%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for M3XGZ9 as seed ortholog is 100%.

Group of orthologs #1939. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:85

Q5KFN1              	100.00%		H3AGE2              	100.00%
Q5KFD1              	100.00%		H3ATA3              	100.00%
Bootstrap support for Q5KFN1 as seed ortholog is 100%.
Bootstrap support for Q5KFD1 as seed ortholog is 100%.
Bootstrap support for H3AGE2 as seed ortholog is 100%.
Bootstrap support for H3ATA3 as seed ortholog is 100%.

Group of orthologs #1940. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:85

Q5KFN0              	100.00%		H3A9T1              	100.00%
                    	       		H3A601              	35.84%
Bootstrap support for Q5KFN0 as seed ortholog is 100%.
Bootstrap support for H3A9T1 as seed ortholog is 100%.

Group of orthologs #1941. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:85

Q5K6Y4              	100.00%		H3BBR3              	100.00%
                    	       		M3XKF5              	55.51%
Bootstrap support for Q5K6Y4 as seed ortholog is 100%.
Bootstrap support for H3BBR3 as seed ortholog is 100%.

Group of orthologs #1942. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:85

Q5KLY9              	100.00%		H3AAY1              	100.00%
Bootstrap support for Q5KLY9 as seed ortholog is 100%.
Bootstrap support for H3AAY1 as seed ortholog is 100%.

Group of orthologs #1943. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:85

Q5KL90              	100.00%		H3BD25              	100.00%
Bootstrap support for Q5KL90 as seed ortholog is 100%.
Bootstrap support for H3BD25 as seed ortholog is 100%.

Group of orthologs #1944. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 L.chalumnae:38

Q5KNX4              	100.00%		H3BGY0              	100.00%
Bootstrap support for Q5KNX4 as seed ortholog is 100%.
Bootstrap support for H3BGY0 as seed ortholog is 84%.

Group of orthologs #1945. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5KFM9              	100.00%		H3A4F9              	100.00%
                    	       		M3XKJ8              	9.61%
Bootstrap support for Q5KFM9 as seed ortholog is 100%.
Bootstrap support for H3A4F9 as seed ortholog is 100%.

Group of orthologs #1946. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5KEC5              	100.00%		H3BAS4              	100.00%
                    	       		H3AW89              	46.31%
Bootstrap support for Q5KEC5 as seed ortholog is 100%.
Bootstrap support for H3BAS4 as seed ortholog is 100%.

Group of orthologs #1947. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

P0CR88              	100.00%		H3AEW2              	100.00%
Bootstrap support for P0CR88 as seed ortholog is 100%.
Bootstrap support for H3AEW2 as seed ortholog is 100%.

Group of orthologs #1948. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5K800              	100.00%		H3AFA3              	100.00%
Bootstrap support for Q5K800 as seed ortholog is 100%.
Bootstrap support for H3AFA3 as seed ortholog is 100%.

Group of orthologs #1949. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5KC17              	100.00%		H3AI10              	100.00%
Bootstrap support for Q5KC17 as seed ortholog is 100%.
Bootstrap support for H3AI10 as seed ortholog is 100%.

Group of orthologs #1950. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:14

Q5KDJ4              	100.00%		H3AGL4              	100.00%
Bootstrap support for Q5KDJ4 as seed ortholog is 100%.
Bootstrap support for H3AGL4 as seed ortholog is 60%.
Alternative seed ortholog is H3A635 (14 bits away from this cluster)

Group of orthologs #1951. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5KCA2              	100.00%		H3APJ6              	100.00%
Bootstrap support for Q5KCA2 as seed ortholog is 100%.
Bootstrap support for H3APJ6 as seed ortholog is 100%.

Group of orthologs #1952. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5KAI3              	100.00%		H3AUK5              	100.00%
Bootstrap support for Q5KAI3 as seed ortholog is 100%.
Bootstrap support for H3AUK5 as seed ortholog is 100%.

Group of orthologs #1953. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 L.chalumnae:84

Q5KP93              	100.00%		H3B6D1              	100.00%
Bootstrap support for Q5KP93 as seed ortholog is 100%.
Bootstrap support for H3B6D1 as seed ortholog is 100%.

Group of orthologs #1954. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 L.chalumnae:83

Q5KGT0              	100.00%		H3AY51              	100.00%
Q5K977              	48.97%		H3AYT8              	28.47%
Bootstrap support for Q5KGT0 as seed ortholog is 100%.
Bootstrap support for H3AY51 as seed ortholog is 100%.

Group of orthologs #1955. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 L.chalumnae:83

P0CL90              	100.00%		H3BFD4              	100.00%
Bootstrap support for P0CL90 as seed ortholog is 100%.
Bootstrap support for H3BFD4 as seed ortholog is 100%.

Group of orthologs #1956. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 L.chalumnae:82

Q5K878              	100.00%		H3AYR6              	100.00%
Q5KNL0              	43.80%		
Bootstrap support for Q5K878 as seed ortholog is 100%.
Bootstrap support for H3AYR6 as seed ortholog is 100%.

Group of orthologs #1957. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 L.chalumnae:82

Q5KE53              	100.00%		H3BG52              	100.00%
                    	       		H3BAU6              	42.45%
Bootstrap support for Q5KE53 as seed ortholog is 100%.
Bootstrap support for H3BG52 as seed ortholog is 100%.

Group of orthologs #1958. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 L.chalumnae:82

Q5KLI5              	100.00%		H3BAB5              	100.00%
                    	       		H3ANP9              	6.60%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for H3BAB5 as seed ortholog is 100%.

Group of orthologs #1959. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 L.chalumnae:17

Q5KJX4              	100.00%		H3AEJ8              	100.00%
Bootstrap support for Q5KJX4 as seed ortholog is 100%.
Bootstrap support for H3AEJ8 as seed ortholog is 74%.
Alternative seed ortholog is H3APZ5 (17 bits away from this cluster)

Group of orthologs #1960. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KHZ8              	100.00%		H3APE5              	100.00%
                    	       		H3B1I0              	34.74%
                    	       		H3AFI3              	32.71%
                    	       		H3B1V9              	10.64%
                    	       		H3ARA7              	7.20%
Bootstrap support for Q5KHZ8 as seed ortholog is 100%.
Bootstrap support for H3APE5 as seed ortholog is 100%.

Group of orthologs #1961. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

P0CM06              	100.00%		H3B0R7              	100.00%
                    	       		H3BF21              	47.45%
                    	       		H3AWV9              	40.78%
                    	       		M3XHU6              	22.35%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for H3B0R7 as seed ortholog is 100%.

Group of orthologs #1962. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:24 L.chalumnae:25

P0CS02              	100.00%		H3ARR6              	100.00%
P0CS04              	60.86%		H2ZUP3              	5.55%
Bootstrap support for P0CS02 as seed ortholog is 80%.
Bootstrap support for H3ARR6 as seed ortholog is 82%.

Group of orthologs #1963. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KL85              	100.00%		H3B2A1              	100.00%
                    	       		H3AXG1              	12.10%
                    	       		H3A7J2              	10.48%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for H3B2A1 as seed ortholog is 100%.

Group of orthologs #1964. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:15

Q5K9W5              	100.00%		H3ABK2              	100.00%
                    	       		H3B4N4              	68.75%
Bootstrap support for Q5K9W5 as seed ortholog is 100%.
Bootstrap support for H3ABK2 as seed ortholog is 69%.
Alternative seed ortholog is H3AHX6 (15 bits away from this cluster)

Group of orthologs #1965. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KHA3              	100.00%		H3B5E5              	100.00%
                    	       		H2ZSM3              	28.57%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for H3B5E5 as seed ortholog is 100%.

Group of orthologs #1966. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KJS9              	100.00%		H2ZWN6              	100.00%
Bootstrap support for Q5KJS9 as seed ortholog is 100%.
Bootstrap support for H2ZWN6 as seed ortholog is 100%.

Group of orthologs #1967. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KI30              	100.00%		H2ZZI9              	100.00%
Bootstrap support for Q5KI30 as seed ortholog is 100%.
Bootstrap support for H2ZZI9 as seed ortholog is 100%.

Group of orthologs #1968. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KDZ6              	100.00%		H3A934              	100.00%
Bootstrap support for Q5KDZ6 as seed ortholog is 100%.
Bootstrap support for H3A934 as seed ortholog is 100%.

Group of orthologs #1969. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KNF3              	100.00%		H3A3Z2              	100.00%
Bootstrap support for Q5KNF3 as seed ortholog is 100%.
Bootstrap support for H3A3Z2 as seed ortholog is 100%.

Group of orthologs #1970. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5K727              	100.00%		H3ASD7              	100.00%
Bootstrap support for Q5K727 as seed ortholog is 100%.
Bootstrap support for H3ASD7 as seed ortholog is 100%.

Group of orthologs #1971. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KHQ2              	100.00%		H3AKA0              	100.00%
Bootstrap support for Q5KHQ2 as seed ortholog is 100%.
Bootstrap support for H3AKA0 as seed ortholog is 100%.

Group of orthologs #1972. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KPR2              	100.00%		H3AFS0              	100.00%
Bootstrap support for Q5KPR2 as seed ortholog is 100%.
Bootstrap support for H3AFS0 as seed ortholog is 100%.

Group of orthologs #1973. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5K8X5              	100.00%		H3B9J4              	100.00%
Bootstrap support for Q5K8X5 as seed ortholog is 100%.
Bootstrap support for H3B9J4 as seed ortholog is 100%.

Group of orthologs #1974. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 L.chalumnae:81

Q5KIS8              	100.00%		H3BAX6              	100.00%
Bootstrap support for Q5KIS8 as seed ortholog is 100%.
Bootstrap support for H3BAX6 as seed ortholog is 100%.

Group of orthologs #1975. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:28 L.chalumnae:19

P0CR36              	100.00%		H3A7J9              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 87%.
Bootstrap support for H3A7J9 as seed ortholog is 76%.

Group of orthologs #1976. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 L.chalumnae:80

Q5K788              	100.00%		H3AG00              	100.00%
Bootstrap support for Q5K788 as seed ortholog is 100%.
Bootstrap support for H3AG00 as seed ortholog is 100%.

Group of orthologs #1977. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 L.chalumnae:80

Q5KPR9              	100.00%		H3AAH0              	100.00%
Bootstrap support for Q5KPR9 as seed ortholog is 100%.
Bootstrap support for H3AAH0 as seed ortholog is 100%.

Group of orthologs #1978. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 L.chalumnae:80

Q5K9V6              	100.00%		H3AVS5              	100.00%
Bootstrap support for Q5K9V6 as seed ortholog is 100%.
Bootstrap support for H3AVS5 as seed ortholog is 100%.

Group of orthologs #1979. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 L.chalumnae:79

Q5KPJ0              	100.00%		H3AQY3              	100.00%
Q5KJD9              	17.69%		
Q5KFL3              	11.55%		
Bootstrap support for Q5KPJ0 as seed ortholog is 100%.
Bootstrap support for H3AQY3 as seed ortholog is 100%.

Group of orthologs #1980. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 L.chalumnae:79

Q5K7S8              	100.00%		H3A6D5              	100.00%
Bootstrap support for Q5K7S8 as seed ortholog is 100%.
Bootstrap support for H3A6D5 as seed ortholog is 100%.

Group of orthologs #1981. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 L.chalumnae:79

Q5KBN5              	100.00%		H3AM51              	100.00%
Bootstrap support for Q5KBN5 as seed ortholog is 100%.
Bootstrap support for H3AM51 as seed ortholog is 100%.

Group of orthologs #1982. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 L.chalumnae:79

Q5K8D9              	100.00%		H3B5U9              	100.00%
Bootstrap support for Q5K8D9 as seed ortholog is 100%.
Bootstrap support for H3B5U9 as seed ortholog is 100%.

Group of orthologs #1983. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:78

Q5K7Z6              	100.00%		H3B8P8              	100.00%
                    	       		H3A457              	16.69%
                    	       		H3A843              	15.93%
                    	       		H3A5K2              	15.77%
                    	       		H3B524              	15.01%
                    	       		H2ZX90              	14.85%
                    	       		H3BGD7              	14.55%
                    	       		H2ZTP4              	7.66%
                    	       		H2ZVC1              	7.04%
Bootstrap support for Q5K7Z6 as seed ortholog is 100%.
Bootstrap support for H3B8P8 as seed ortholog is 100%.

Group of orthologs #1984. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:78

Q5KDF9              	100.00%		H3AV09              	100.00%
Q5KQ97              	21.29%		
Bootstrap support for Q5KDF9 as seed ortholog is 100%.
Bootstrap support for H3AV09 as seed ortholog is 100%.

Group of orthologs #1985. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:78

Q5K768              	100.00%		H2ZWS1              	100.00%
Bootstrap support for Q5K768 as seed ortholog is 100%.
Bootstrap support for H2ZWS1 as seed ortholog is 100%.

Group of orthologs #1986. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:78

Q5KCH4              	100.00%		H3AA68              	100.00%
Bootstrap support for Q5KCH4 as seed ortholog is 100%.
Bootstrap support for H3AA68 as seed ortholog is 100%.

Group of orthologs #1987. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:78

Q5K9F3              	100.00%		H3APZ6              	100.00%
Bootstrap support for Q5K9F3 as seed ortholog is 100%.
Bootstrap support for H3APZ6 as seed ortholog is 100%.

Group of orthologs #1988. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:30 L.chalumnae:78

Q5KKT1              	100.00%		H3AML1              	100.00%
Bootstrap support for Q5KKT1 as seed ortholog is 84%.
Bootstrap support for H3AML1 as seed ortholog is 100%.

Group of orthologs #1989. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 L.chalumnae:78

Q5KNI8              	100.00%		H3AZ08              	100.00%
Bootstrap support for Q5KNI8 as seed ortholog is 100%.
Bootstrap support for H3AZ08 as seed ortholog is 100%.

Group of orthologs #1990. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 L.chalumnae:77

Q5KIY1              	100.00%		H2ZRU6              	100.00%
Bootstrap support for Q5KIY1 as seed ortholog is 100%.
Bootstrap support for H2ZRU6 as seed ortholog is 100%.

Group of orthologs #1991. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 L.chalumnae:77

P0CR32              	100.00%		H3ABN6              	100.00%
Bootstrap support for P0CR32 as seed ortholog is 100%.
Bootstrap support for H3ABN6 as seed ortholog is 100%.

Group of orthologs #1992. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 L.chalumnae:77

Q5KGD9              	100.00%		H3AN75              	100.00%
Bootstrap support for Q5KGD9 as seed ortholog is 100%.
Bootstrap support for H3AN75 as seed ortholog is 100%.

Group of orthologs #1993. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:33 L.chalumnae:77

Q5KM63              	100.00%		H3AUF1              	100.00%
Bootstrap support for Q5KM63 as seed ortholog is 79%.
Bootstrap support for H3AUF1 as seed ortholog is 100%.

Group of orthologs #1994. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5K7N1              	100.00%		H2ZXP0              	100.00%
Q5KMW9              	12.04%		H3AZ16              	57.88%
Q5KKK7              	12.04%		
Q5KBZ5              	7.09%		
Bootstrap support for Q5K7N1 as seed ortholog is 100%.
Bootstrap support for H2ZXP0 as seed ortholog is 100%.

Group of orthologs #1995. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:3

Q5KQ37              	100.00%		H3AC84              	100.00%
                    	       		H3AV92              	20.11%
                    	       		H3AHG7              	19.21%
                    	       		H3AQB4              	18.58%
                    	       		H2ZW36              	11.31%
Bootstrap support for Q5KQ37 as seed ortholog is 100%.
Bootstrap support for H3AC84 as seed ortholog is 71%.
Alternative seed ortholog is H3B130 (3 bits away from this cluster)

Group of orthologs #1996. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KBG7              	100.00%		H3AZI4              	100.00%
                    	       		H3B931              	20.04%
                    	       		H3AMT0              	14.14%
Bootstrap support for Q5KBG7 as seed ortholog is 100%.
Bootstrap support for H3AZI4 as seed ortholog is 100%.

Group of orthologs #1997. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KI28              	100.00%		H3A5V2              	100.00%
Bootstrap support for Q5KI28 as seed ortholog is 100%.
Bootstrap support for H3A5V2 as seed ortholog is 100%.

Group of orthologs #1998. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KKC0              	100.00%		H3AE44              	100.00%
Bootstrap support for Q5KKC0 as seed ortholog is 100%.
Bootstrap support for H3AE44 as seed ortholog is 100%.

Group of orthologs #1999. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

P0CM36              	100.00%		H3AZG4              	100.00%
Bootstrap support for P0CM36 as seed ortholog is 100%.
Bootstrap support for H3AZG4 as seed ortholog is 100%.

Group of orthologs #2000. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5K8I2              	100.00%		H3AZW8              	100.00%
Bootstrap support for Q5K8I2 as seed ortholog is 100%.
Bootstrap support for H3AZW8 as seed ortholog is 100%.

Group of orthologs #2001. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KQ19              	100.00%		H3AMR3              	100.00%
Bootstrap support for Q5KQ19 as seed ortholog is 100%.
Bootstrap support for H3AMR3 as seed ortholog is 100%.

Group of orthologs #2002. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KDZ7              	100.00%		H3B142              	100.00%
Bootstrap support for Q5KDZ7 as seed ortholog is 100%.
Bootstrap support for H3B142 as seed ortholog is 100%.

Group of orthologs #2003. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KIN2              	100.00%		H3B7B0              	100.00%
Bootstrap support for Q5KIN2 as seed ortholog is 100%.
Bootstrap support for H3B7B0 as seed ortholog is 100%.

Group of orthologs #2004. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 L.chalumnae:76

Q5KD68              	100.00%		M3XLI2              	100.00%
Bootstrap support for Q5KD68 as seed ortholog is 100%.
Bootstrap support for M3XLI2 as seed ortholog is 100%.

Group of orthologs #2005. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:75

Q5K7A3              	100.00%		H3ATJ4              	100.00%
                    	       		H3AUT9              	45.82%
                    	       		H3APR6              	36.12%
                    	       		H3B641              	23.16%
                    	       		M3XJR9              	5.61%
                    	       		H2ZUC7              	5.41%
Bootstrap support for Q5K7A3 as seed ortholog is 100%.
Bootstrap support for H3ATJ4 as seed ortholog is 100%.

Group of orthologs #2006. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:75

Q5KLS9              	100.00%		H3B2P0              	100.00%
                    	       		H3AJZ2              	54.80%
Bootstrap support for Q5KLS9 as seed ortholog is 100%.
Bootstrap support for H3B2P0 as seed ortholog is 100%.

Group of orthologs #2007. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:75

Q5KBQ0              	100.00%		H3AFW2              	100.00%
Bootstrap support for Q5KBQ0 as seed ortholog is 100%.
Bootstrap support for H3AFW2 as seed ortholog is 100%.

Group of orthologs #2008. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:75

Q5KA99              	100.00%		H3B8T5              	100.00%
Bootstrap support for Q5KA99 as seed ortholog is 100%.
Bootstrap support for H3B8T5 as seed ortholog is 100%.

Group of orthologs #2009. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:75

Q5KJX2              	100.00%		H3B0G2              	100.00%
Bootstrap support for Q5KJX2 as seed ortholog is 100%.
Bootstrap support for H3B0G2 as seed ortholog is 100%.

Group of orthologs #2010. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 L.chalumnae:75

Q5KI69              	100.00%		H3BG65              	100.00%
Bootstrap support for Q5KI69 as seed ortholog is 100%.
Bootstrap support for H3BG65 as seed ortholog is 100%.

Group of orthologs #2011. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KJ78              	100.00%		H2ZYJ9              	100.00%
Q5KE36              	14.71%		H3AYM7              	19.12%
Q5KE37              	14.26%		H3AKC0              	18.27%
                    	       		H3AAT6              	18.27%
Bootstrap support for Q5KJ78 as seed ortholog is 100%.
Bootstrap support for H2ZYJ9 as seed ortholog is 100%.

Group of orthologs #2012. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:19

Q5KIC6              	100.00%		H3AQJ5              	100.00%
                    	       		H3AYW9              	60.16%
                    	       		H3AK68              	44.77%
                    	       		H3AQT0              	6.11%
Bootstrap support for Q5KIC6 as seed ortholog is 100%.
Bootstrap support for H3AQJ5 as seed ortholog is 72%.
Alternative seed ortholog is H2ZWX9 (19 bits away from this cluster)

Group of orthologs #2013. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KE72              	100.00%		H3BF75              	100.00%
                    	       		H3A9Q2              	43.51%
                    	       		H3B1P5              	6.03%
Bootstrap support for Q5KE72 as seed ortholog is 100%.
Bootstrap support for H3BF75 as seed ortholog is 100%.

Group of orthologs #2014. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KH69              	100.00%		H3B3G2              	100.00%
                    	       		H3B6X6              	37.84%
Bootstrap support for Q5KH69 as seed ortholog is 100%.
Bootstrap support for H3B3G2 as seed ortholog is 100%.

Group of orthologs #2015. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5K7S6              	100.00%		H3BE62              	100.00%
                    	       		H3ADC8              	39.81%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for H3BE62 as seed ortholog is 100%.

Group of orthologs #2016. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KPH9              	100.00%		H3AIH1              	100.00%
Bootstrap support for Q5KPH9 as seed ortholog is 100%.
Bootstrap support for H3AIH1 as seed ortholog is 100%.

Group of orthologs #2017. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KMV9              	100.00%		H3AN07              	100.00%
Bootstrap support for Q5KMV9 as seed ortholog is 100%.
Bootstrap support for H3AN07 as seed ortholog is 100%.

Group of orthologs #2018. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KLI2              	100.00%		H3AXD8              	100.00%
Bootstrap support for Q5KLI2 as seed ortholog is 100%.
Bootstrap support for H3AXD8 as seed ortholog is 100%.

Group of orthologs #2019. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 L.chalumnae:74

Q5KA20              	100.00%		H3BEQ0              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 100%.
Bootstrap support for H3BEQ0 as seed ortholog is 100%.

Group of orthologs #2020. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KH14              	100.00%		H3AG90              	100.00%
                    	       		H3BI65              	40.72%
                    	       		H3B5Q9              	40.48%
Bootstrap support for Q5KH14 as seed ortholog is 100%.
Bootstrap support for H3AG90 as seed ortholog is 100%.

Group of orthologs #2021. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KI35              	100.00%		H3A093              	100.00%
Bootstrap support for Q5KI35 as seed ortholog is 100%.
Bootstrap support for H3A093 as seed ortholog is 100%.

Group of orthologs #2022. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KMD5              	100.00%		H3ASJ3              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for H3ASJ3 as seed ortholog is 100%.

Group of orthologs #2023. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KG70              	100.00%		H3BD60              	100.00%
Bootstrap support for Q5KG70 as seed ortholog is 100%.
Bootstrap support for H3BD60 as seed ortholog is 100%.

Group of orthologs #2024. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KGA6              	100.00%		H3BE85              	100.00%
Bootstrap support for Q5KGA6 as seed ortholog is 100%.
Bootstrap support for H3BE85 as seed ortholog is 100%.

Group of orthologs #2025. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KPJ3              	100.00%		H3BA32              	100.00%
Bootstrap support for Q5KPJ3 as seed ortholog is 100%.
Bootstrap support for H3BA32 as seed ortholog is 100%.

Group of orthologs #2026. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 L.chalumnae:73

Q5KNM3              	100.00%		H3BDX1              	100.00%
Bootstrap support for Q5KNM3 as seed ortholog is 100%.
Bootstrap support for H3BDX1 as seed ortholog is 100%.

Group of orthologs #2027. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:3

Q5K8N5              	100.00%		H3AJ99              	100.00%
Q5KMX0              	8.68%		
Q5K7F4              	7.74%		
Q5KJN2              	6.80%		
Bootstrap support for Q5K8N5 as seed ortholog is 100%.
Bootstrap support for H3AJ99 as seed ortholog is 75%.

Group of orthologs #2028. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KHM2              	100.00%		H3AEU6              	100.00%
                    	       		H3ARG8              	63.61%
                    	       		H2ZUS3              	27.57%
                    	       		H3B854              	17.47%
Bootstrap support for Q5KHM2 as seed ortholog is 100%.
Bootstrap support for H3AEU6 as seed ortholog is 100%.

Group of orthologs #2029. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KD64              	100.00%		H2ZS14              	100.00%
                    	       		H3A3V5              	36.63%
Bootstrap support for Q5KD64 as seed ortholog is 100%.
Bootstrap support for H2ZS14 as seed ortholog is 100%.

Group of orthologs #2030. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KMN2              	100.00%		H3BGN2              	100.00%
                    	       		H3BGX5              	30.58%
Bootstrap support for Q5KMN2 as seed ortholog is 100%.
Bootstrap support for H3BGN2 as seed ortholog is 100%.

Group of orthologs #2031. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

P0CR98              	100.00%		H2ZZD8              	100.00%
Bootstrap support for P0CR98 as seed ortholog is 100%.
Bootstrap support for H2ZZD8 as seed ortholog is 100%.

Group of orthologs #2032. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KAA3              	100.00%		H3AJZ9              	100.00%
Bootstrap support for Q5KAA3 as seed ortholog is 100%.
Bootstrap support for H3AJZ9 as seed ortholog is 100%.

Group of orthologs #2033. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KLT2              	100.00%		H3AAS6              	100.00%
Bootstrap support for Q5KLT2 as seed ortholog is 100%.
Bootstrap support for H3AAS6 as seed ortholog is 100%.

Group of orthologs #2034. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KHC1              	100.00%		H3AZH6              	100.00%
Bootstrap support for Q5KHC1 as seed ortholog is 100%.
Bootstrap support for H3AZH6 as seed ortholog is 100%.

Group of orthologs #2035. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 L.chalumnae:72

Q5KGY0              	100.00%		H3B6G4              	100.00%
Bootstrap support for Q5KGY0 as seed ortholog is 100%.
Bootstrap support for H3B6G4 as seed ortholog is 100%.

Group of orthologs #2036. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5K904              	100.00%		H3AVA3              	100.00%
                    	       		H3BII4              	69.74%
Bootstrap support for Q5K904 as seed ortholog is 100%.
Bootstrap support for H3AVA3 as seed ortholog is 100%.

Group of orthologs #2037. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5KPR0              	100.00%		H3AEJ4              	100.00%
                    	       		H3BFL5              	42.87%
Bootstrap support for Q5KPR0 as seed ortholog is 100%.
Bootstrap support for H3AEJ4 as seed ortholog is 100%.

Group of orthologs #2038. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:9

Q5K9S2              	100.00%		H3AZ96              	100.00%
                    	       		H3AVB0              	18.89%
Bootstrap support for Q5K9S2 as seed ortholog is 100%.
Bootstrap support for H3AZ96 as seed ortholog is 77%.

Group of orthologs #2039. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:5

Q5KN92              	100.00%		H2ZRY0              	100.00%
Bootstrap support for Q5KN92 as seed ortholog is 100%.
Bootstrap support for H2ZRY0 as seed ortholog is 52%.
Alternative seed ortholog is H3AUV8 (5 bits away from this cluster)

Group of orthologs #2040. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5KKL9              	100.00%		H3AQ13              	100.00%
Bootstrap support for Q5KKL9 as seed ortholog is 100%.
Bootstrap support for H3AQ13 as seed ortholog is 100%.

Group of orthologs #2041. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5KE76              	100.00%		H3B3N4              	100.00%
Bootstrap support for Q5KE76 as seed ortholog is 100%.
Bootstrap support for H3B3N4 as seed ortholog is 100%.

Group of orthologs #2042. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

P0CN38              	100.00%		H3BFF6              	100.00%
Bootstrap support for P0CN38 as seed ortholog is 100%.
Bootstrap support for H3BFF6 as seed ortholog is 100%.

Group of orthologs #2043. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5KKV0              	100.00%		H3AZT8              	100.00%
Bootstrap support for Q5KKV0 as seed ortholog is 100%.
Bootstrap support for H3AZT8 as seed ortholog is 100%.

Group of orthologs #2044. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5KF64              	100.00%		H3BG84              	100.00%
Bootstrap support for Q5KF64 as seed ortholog is 100%.
Bootstrap support for H3BG84 as seed ortholog is 100%.

Group of orthologs #2045. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 L.chalumnae:71

Q5KKV7              	100.00%		H3BBQ7              	100.00%
Bootstrap support for Q5KKV7 as seed ortholog is 100%.
Bootstrap support for H3BBQ7 as seed ortholog is 100%.

Group of orthologs #2046. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 L.chalumnae:23

Q5KIX2              	100.00%		H3AZD4              	100.00%
                    	       		H3A8I6              	33.17%
                    	       		H3ACB9              	21.02%
                    	       		H3A760              	20.53%
                    	       		H3A5Q6              	6.68%
Bootstrap support for Q5KIX2 as seed ortholog is 100%.
Bootstrap support for H3AZD4 as seed ortholog is 55%.
Alternative seed ortholog is H3AK29 (23 bits away from this cluster)

Group of orthologs #2047. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 L.chalumnae:70

Q5KHB6              	100.00%		H3B6N3              	100.00%
                    	       		H3B8X0              	23.65%
Bootstrap support for Q5KHB6 as seed ortholog is 100%.
Bootstrap support for H3B6N3 as seed ortholog is 100%.

Group of orthologs #2048. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 L.chalumnae:70

Q5KHW4              	100.00%		H3AAG9              	100.00%
Bootstrap support for Q5KHW4 as seed ortholog is 100%.
Bootstrap support for H3AAG9 as seed ortholog is 100%.

Group of orthologs #2049. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 L.chalumnae:70

Q5KCB1              	100.00%		H3B3C7              	100.00%
Bootstrap support for Q5KCB1 as seed ortholog is 100%.
Bootstrap support for H3B3C7 as seed ortholog is 100%.

Group of orthologs #2050. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 L.chalumnae:70

Q5KMT7              	100.00%		H3ASP6              	100.00%
Bootstrap support for Q5KMT7 as seed ortholog is 100%.
Bootstrap support for H3ASP6 as seed ortholog is 100%.

Group of orthologs #2051. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 L.chalumnae:69

Q5KFN8              	100.00%		H3BEQ4              	100.00%
                    	       		H2ZW29              	50.07%
                    	       		H3B5Q6              	42.84%
                    	       		H3AAM1              	12.52%
                    	       		H3B109              	12.10%
                    	       		H3B0U2              	11.68%
                    	       		H3ATC6              	11.13%
                    	       		H3AWA5              	10.43%
                    	       		H3B8Q8              	9.74%
                    	       		M3XIU6              	9.04%
Bootstrap support for Q5KFN8 as seed ortholog is 100%.
Bootstrap support for H3BEQ4 as seed ortholog is 100%.

Group of orthologs #2052. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 L.chalumnae:69

Q5KND5              	100.00%		H3A2C0              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for H3A2C0 as seed ortholog is 100%.

Group of orthologs #2053. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 L.chalumnae:69

Q5KJ14              	100.00%		H3ATT6              	100.00%
Bootstrap support for Q5KJ14 as seed ortholog is 100%.
Bootstrap support for H3ATT6 as seed ortholog is 100%.

Group of orthologs #2054. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 L.chalumnae:69

Q5KK48              	100.00%		H3B380              	100.00%
Bootstrap support for Q5KK48 as seed ortholog is 100%.
Bootstrap support for H3B380 as seed ortholog is 100%.

Group of orthologs #2055. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 L.chalumnae:68

Q5KH40              	100.00%		H3B166              	100.00%
                    	       		M3XIB4              	62.13%
                    	       		H3B338              	55.79%
                    	       		H3B6A9              	5.88%
Bootstrap support for Q5KH40 as seed ortholog is 100%.
Bootstrap support for H3B166 as seed ortholog is 100%.

Group of orthologs #2056. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 L.chalumnae:68

Q5KHD2              	100.00%		H3BAK9              	100.00%
Bootstrap support for Q5KHD2 as seed ortholog is 100%.
Bootstrap support for H3BAK9 as seed ortholog is 100%.

Group of orthologs #2057. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KF71              	100.00%		H3B552              	100.00%
                    	       		H3B3Z0              	31.11%
Bootstrap support for Q5KF71 as seed ortholog is 100%.
Bootstrap support for H3B552 as seed ortholog is 100%.

Group of orthologs #2058. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KBT9              	100.00%		H3A0T1              	100.00%
Bootstrap support for Q5KBT9 as seed ortholog is 100%.
Bootstrap support for H3A0T1 as seed ortholog is 100%.

Group of orthologs #2059. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KKH5              	100.00%		H3AHZ8              	100.00%
Bootstrap support for Q5KKH5 as seed ortholog is 100%.
Bootstrap support for H3AHZ8 as seed ortholog is 100%.

Group of orthologs #2060. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KJP3              	100.00%		H3AIX8              	100.00%
Bootstrap support for Q5KJP3 as seed ortholog is 100%.
Bootstrap support for H3AIX8 as seed ortholog is 100%.

Group of orthologs #2061. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KGY2              	100.00%		H3AN51              	100.00%
Bootstrap support for Q5KGY2 as seed ortholog is 100%.
Bootstrap support for H3AN51 as seed ortholog is 100%.

Group of orthologs #2062. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KCI8              	100.00%		H3B701              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for H3B701 as seed ortholog is 100%.

Group of orthologs #2063. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

P0CP04              	100.00%		M3XKY7              	100.00%
Bootstrap support for P0CP04 as seed ortholog is 100%.
Bootstrap support for M3XKY7 as seed ortholog is 100%.

Group of orthologs #2064. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KK46              	100.00%		H3B875              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for H3B875 as seed ortholog is 100%.

Group of orthologs #2065. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 L.chalumnae:67

Q5KM41              	100.00%		M3XHM0              	100.00%
Bootstrap support for Q5KM41 as seed ortholog is 100%.
Bootstrap support for M3XHM0 as seed ortholog is 100%.

Group of orthologs #2066. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KH31              	100.00%		H3BEI8              	100.00%
                    	       		M3XK10              	40.21%
                    	       		H3A1U4              	39.37%
                    	       		H2ZSL6              	22.11%
Bootstrap support for Q5KH31 as seed ortholog is 100%.
Bootstrap support for H3BEI8 as seed ortholog is 100%.

Group of orthologs #2067. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KBV8              	100.00%		H3BAJ4              	100.00%
                    	       		H2ZYK5              	96.69%
                    	       		H3ARZ2              	38.57%
Bootstrap support for Q5KBV8 as seed ortholog is 100%.
Bootstrap support for H3BAJ4 as seed ortholog is 100%.

Group of orthologs #2068. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KBR3              	100.00%		H3AAC6              	100.00%
                    	       		H3A0I6              	67.98%
Bootstrap support for Q5KBR3 as seed ortholog is 100%.
Bootstrap support for H3AAC6 as seed ortholog is 100%.

Group of orthologs #2069. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KBB8              	100.00%		H3A1R6              	100.00%
Bootstrap support for Q5KBB8 as seed ortholog is 100%.
Bootstrap support for H3A1R6 as seed ortholog is 100%.

Group of orthologs #2070. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KFV7              	100.00%		H3ABS3              	100.00%
Bootstrap support for Q5KFV7 as seed ortholog is 100%.
Bootstrap support for H3ABS3 as seed ortholog is 100%.

Group of orthologs #2071. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KLG2              	100.00%		H3ADD5              	100.00%
Bootstrap support for Q5KLG2 as seed ortholog is 100%.
Bootstrap support for H3ADD5 as seed ortholog is 100%.

Group of orthologs #2072. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5K8H3              	100.00%		H3AXE9              	100.00%
Bootstrap support for Q5K8H3 as seed ortholog is 100%.
Bootstrap support for H3AXE9 as seed ortholog is 100%.

Group of orthologs #2073. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 L.chalumnae:66

Q5KPL1              	100.00%		H3ATL7              	100.00%
Bootstrap support for Q5KPL1 as seed ortholog is 100%.
Bootstrap support for H3ATL7 as seed ortholog is 100%.

Group of orthologs #2074. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

Q5K7L4              	100.00%		M3XHC3              	100.00%
Q5KI02              	100.00%		H3B5V4              	100.00%
Q5KHF5              	71.51%		H3AW83              	30.63%
Q5KHX6              	62.40%		H3BDJ0              	24.79%
Q5KNP3              	20.73%		H2ZRU4              	22.19%
Q5KKU1              	20.34%		
Q5KQ74              	19.56%		
Q5K7A1              	18.75%		
Q5KPG5              	16.55%		
Q5KBM4              	16.37%		
Q5K9T2              	15.97%		
Q5KKS6              	15.58%		
Q5KA87              	15.58%		
Q5K7F5              	14.74%		
Q5K886              	14.64%		
Q5K875              	14.44%		
Q5KC55              	13.89%		
Q5KBE7              	13.49%		
Q5K9X4              	11.51%		
Q5KN93              	11.01%		
Q5KG03              	10.22%		
Q5KEM4              	9.72%		
Q5KNB7              	9.52%		
Q5KFM8              	9.23%		
Q5KA09              	9.03%		
Q5K928              	8.83%		
Q5KFK2              	8.63%		
Q5KEI1              	8.53%		
Q5K984              	8.33%		
Q5KB76              	8.33%		
Q5KJE6              	8.23%		
Q5K9A2              	8.13%		
Q5KFK1              	7.72%		
Q5K860              	7.04%		
Q5KAT7              	7.02%		
Q5KER3              	6.94%		
Q5KL40              	6.94%		
Q5KC83              	6.85%		
Q5KGY8              	6.85%		
Q5KH82              	5.36%		
Bootstrap support for Q5K7L4 as seed ortholog is 100%.
Bootstrap support for Q5KI02 as seed ortholog is 100%.
Bootstrap support for M3XHC3 as seed ortholog is 100%.
Bootstrap support for H3B5V4 as seed ortholog is 100%.

Group of orthologs #2075. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

Q5KHY8              	100.00%		H3AFG6              	100.00%
                    	       		H3ADZ3              	32.78%
                    	       		H3BBI5              	32.11%
                    	       		H3ACV4              	31.10%
                    	       		H3AIZ0              	29.10%
                    	       		H2ZWJ0              	27.42%
                    	       		H3BB24              	27.09%
                    	       		H3AB17              	26.42%
                    	       		H2ZUS0              	25.42%
                    	       		H3AKS3              	24.08%
                    	       		H3A088              	20.40%
                    	       		H3AC10              	18.06%
                    	       		H3BAA0              	14.38%
                    	       		H3AW72              	10.37%
Bootstrap support for Q5KHY8 as seed ortholog is 100%.
Bootstrap support for H3AFG6 as seed ortholog is 100%.

Group of orthologs #2076. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

P0CM00              	100.00%		H2ZW86              	100.00%
Bootstrap support for P0CM00 as seed ortholog is 100%.
Bootstrap support for H2ZW86 as seed ortholog is 100%.

Group of orthologs #2077. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

Q5KEX6              	100.00%		H3A7B3              	100.00%
Bootstrap support for Q5KEX6 as seed ortholog is 100%.
Bootstrap support for H3A7B3 as seed ortholog is 100%.

Group of orthologs #2078. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

P0CQ28              	100.00%		M3XLH2              	100.00%
Bootstrap support for P0CQ28 as seed ortholog is 100%.
Bootstrap support for M3XLH2 as seed ortholog is 100%.

Group of orthologs #2079. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

Q5KIM9              	100.00%		H3BBD8              	100.00%
Bootstrap support for Q5KIM9 as seed ortholog is 100%.
Bootstrap support for H3BBD8 as seed ortholog is 100%.

Group of orthologs #2080. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 L.chalumnae:65

Q5KJK7              	100.00%		M3XH57              	100.00%
Bootstrap support for Q5KJK7 as seed ortholog is 100%.
Bootstrap support for M3XH57 as seed ortholog is 100%.

Group of orthologs #2081. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 L.chalumnae:64

Q5KCF3              	100.00%		H3AJX6              	100.00%
                    	       		H2ZWD4              	31.49%
Bootstrap support for Q5KCF3 as seed ortholog is 100%.
Bootstrap support for H3AJX6 as seed ortholog is 100%.

Group of orthologs #2082. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 L.chalumnae:64

Q5KJN7              	100.00%		H3AJ33              	100.00%
Bootstrap support for Q5KJN7 as seed ortholog is 100%.
Bootstrap support for H3AJ33 as seed ortholog is 100%.

Group of orthologs #2083. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 L.chalumnae:64

Q5K9N4              	100.00%		H3BIT2              	100.00%
Bootstrap support for Q5K9N4 as seed ortholog is 100%.
Bootstrap support for H3BIT2 as seed ortholog is 100%.

Group of orthologs #2084. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 L.chalumnae:63

Q5KJ61              	100.00%		H3BGT1              	100.00%
                    	       		H3B3W7              	46.48%
                    	       		H3B2N3              	42.83%
                    	       		H3AVC3              	34.69%
                    	       		H3A688              	28.58%
Bootstrap support for Q5KJ61 as seed ortholog is 100%.
Bootstrap support for H3BGT1 as seed ortholog is 100%.

Group of orthologs #2085. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 L.chalumnae:63

Q5K8W4              	100.00%		H3ANV8              	100.00%
                    	       		H3AWQ3              	13.07%
                    	       		H3BEK9              	9.10%
Bootstrap support for Q5K8W4 as seed ortholog is 100%.
Bootstrap support for H3ANV8 as seed ortholog is 100%.

Group of orthologs #2086. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 L.chalumnae:63

Q5KIU3              	100.00%		H3AT28              	100.00%
                    	       		H3AML0              	26.28%
Bootstrap support for Q5KIU3 as seed ortholog is 100%.
Bootstrap support for H3AT28 as seed ortholog is 100%.

Group of orthologs #2087. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 L.chalumnae:63

Q5KMP9              	100.00%		H3A2S6              	100.00%
Bootstrap support for Q5KMP9 as seed ortholog is 100%.
Bootstrap support for H3A2S6 as seed ortholog is 100%.

Group of orthologs #2088. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 L.chalumnae:63

Q5KES2              	100.00%		H3AZ04              	100.00%
Bootstrap support for Q5KES2 as seed ortholog is 100%.
Bootstrap support for H3AZ04 as seed ortholog is 100%.

Group of orthologs #2089. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 L.chalumnae:63

Q5KIF0              	100.00%		H3B3K0              	100.00%
Bootstrap support for Q5KIF0 as seed ortholog is 100%.
Bootstrap support for H3B3K0 as seed ortholog is 100%.

Group of orthologs #2090. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 L.chalumnae:62

Q5KDB8              	100.00%		H3ADU3              	100.00%
Bootstrap support for Q5KDB8 as seed ortholog is 100%.
Bootstrap support for H3ADU3 as seed ortholog is 100%.

Group of orthologs #2091. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 L.chalumnae:62

Q5KLZ5              	100.00%		H3ABL9              	100.00%
Bootstrap support for Q5KLZ5 as seed ortholog is 100%.
Bootstrap support for H3ABL9 as seed ortholog is 100%.

Group of orthologs #2092. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 L.chalumnae:62

Q5KCJ7              	100.00%		H3AWR8              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for H3AWR8 as seed ortholog is 100%.

Group of orthologs #2093. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 L.chalumnae:62

Q5KFY1              	100.00%		H3AWS5              	100.00%
Bootstrap support for Q5KFY1 as seed ortholog is 100%.
Bootstrap support for H3AWS5 as seed ortholog is 100%.

Group of orthologs #2094. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 L.chalumnae:62

P0CS58              	100.00%		M3XKC9              	100.00%
Bootstrap support for P0CS58 as seed ortholog is 100%.
Bootstrap support for M3XKC9 as seed ortholog is 100%.

Group of orthologs #2095. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 L.chalumnae:7

Q5KNV1              	100.00%		H3BHR1              	100.00%
Q5K9W4              	31.25%		
Q5KAC4              	27.95%		
Q5K7U4              	26.39%		
Q5KC63              	25.78%		
Q5KL95              	24.48%		
Q5KEB6              	23.96%		
Q5KL96              	23.35%		
Q5KAJ8              	19.18%		
Q5KL87              	18.49%		
Q5KGZ0              	15.45%		
Q5KKZ4              	14.58%		
Q5KAY0              	13.19%		
Q5KHE0              	13.02%		
Q5K858              	12.33%		
Q5KEV7              	12.24%		
Q5KN03              	5.12%		
Bootstrap support for Q5KNV1 as seed ortholog is 100%.
Bootstrap support for H3BHR1 as seed ortholog is 59%.
Alternative seed ortholog is H3AK03 (7 bits away from this cluster)

Group of orthologs #2096. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 L.chalumnae:61

Q5KLA4              	100.00%		H3AX93              	100.00%
                    	       		H3B7H7              	100.00%
                    	       		H3AZZ9              	49.75%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for H3AX93 as seed ortholog is 100%.
Bootstrap support for H3B7H7 as seed ortholog is 100%.

Group of orthologs #2097. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 L.chalumnae:61

Q5KEZ0              	100.00%		H2ZVQ9              	100.00%
                    	       		H3AQR4              	70.71%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for H2ZVQ9 as seed ortholog is 100%.

Group of orthologs #2098. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 L.chalumnae:61

Q5KJW3              	100.00%		H3A4S3              	100.00%
Bootstrap support for Q5KJW3 as seed ortholog is 100%.
Bootstrap support for H3A4S3 as seed ortholog is 100%.

Group of orthologs #2099. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 L.chalumnae:61

P0CR96              	100.00%		H3BHV5              	100.00%
Bootstrap support for P0CR96 as seed ortholog is 100%.
Bootstrap support for H3BHV5 as seed ortholog is 100%.

Group of orthologs #2100. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:3 L.chalumnae:61

Q5KGK8              	100.00%		M3XJ30              	100.00%
Bootstrap support for Q5KGK8 as seed ortholog is 86%.
Bootstrap support for M3XJ30 as seed ortholog is 100%.

Group of orthologs #2101. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 L.chalumnae:60

Q5KBG2              	100.00%		H3AI74              	100.00%
                    	       		H2ZRU2              	25.50%
Bootstrap support for Q5KBG2 as seed ortholog is 100%.
Bootstrap support for H3AI74 as seed ortholog is 100%.

Group of orthologs #2102. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 L.chalumnae:60

P0CR94              	100.00%		H3B836              	100.00%
                    	       		H3BC91              	18.98%
Bootstrap support for P0CR94 as seed ortholog is 100%.
Bootstrap support for H3B836 as seed ortholog is 100%.

Group of orthologs #2103. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 L.chalumnae:60

Q5KIV8              	100.00%		H3B292              	100.00%
                    	       		H3B737              	59.58%
Bootstrap support for Q5KIV8 as seed ortholog is 100%.
Bootstrap support for H3B292 as seed ortholog is 100%.

Group of orthologs #2104. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:59

F5H8V6              	100.00%		H2ZWF6              	100.00%
                    	       		H3AGS8              	74.19%
                    	       		H3B1D8              	57.47%
Bootstrap support for F5H8V6 as seed ortholog is 100%.
Bootstrap support for H2ZWF6 as seed ortholog is 100%.

Group of orthologs #2105. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:59

Q5K8Z4              	100.00%		H2ZUL5              	100.00%
Bootstrap support for Q5K8Z4 as seed ortholog is 100%.
Bootstrap support for H2ZUL5 as seed ortholog is 100%.

Group of orthologs #2106. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:59

Q5KAA4              	100.00%		H2ZYW5              	100.00%
Bootstrap support for Q5KAA4 as seed ortholog is 100%.
Bootstrap support for H2ZYW5 as seed ortholog is 100%.

Group of orthologs #2107. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:59

Q5KJY5              	100.00%		H3A8H3              	100.00%
Bootstrap support for Q5KJY5 as seed ortholog is 100%.
Bootstrap support for H3A8H3 as seed ortholog is 100%.

Group of orthologs #2108. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:12

Q5KM81              	100.00%		H3AAY6              	100.00%
Bootstrap support for Q5KM81 as seed ortholog is 100%.
Bootstrap support for H3AAY6 as seed ortholog is 70%.
Alternative seed ortholog is H3B7D3 (12 bits away from this cluster)

Group of orthologs #2109. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 L.chalumnae:59

Q5K7P3              	100.00%		H3BAI4              	100.00%
Bootstrap support for Q5K7P3 as seed ortholog is 100%.
Bootstrap support for H3BAI4 as seed ortholog is 100%.

Group of orthologs #2110. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 L.chalumnae:58

Q5KL61              	100.00%		H3A598              	100.00%
Bootstrap support for Q5KL61 as seed ortholog is 100%.
Bootstrap support for H3A598 as seed ortholog is 100%.

Group of orthologs #2111. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 L.chalumnae:58

Q5KNX9              	100.00%		H3AH57              	100.00%
Bootstrap support for Q5KNX9 as seed ortholog is 100%.
Bootstrap support for H3AH57 as seed ortholog is 100%.

Group of orthologs #2112. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 L.chalumnae:58

Q5K8Z8              	100.00%		H3BDW8              	100.00%
Bootstrap support for Q5K8Z8 as seed ortholog is 100%.
Bootstrap support for H3BDW8 as seed ortholog is 100%.

Group of orthologs #2113. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 L.chalumnae:58

Q5K8H0              	100.00%		H3BI02              	100.00%
Bootstrap support for Q5K8H0 as seed ortholog is 100%.
Bootstrap support for H3BI02 as seed ortholog is 100%.

Group of orthologs #2114. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:57

Q5KJL1              	100.00%		H3A073              	100.00%
Bootstrap support for Q5KJL1 as seed ortholog is 100%.
Bootstrap support for H3A073 as seed ortholog is 100%.

Group of orthologs #2115. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:57

Q5K823              	100.00%		H3AIK3              	100.00%
Bootstrap support for Q5K823 as seed ortholog is 100%.
Bootstrap support for H3AIK3 as seed ortholog is 100%.

Group of orthologs #2116. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:57

P0CS72              	100.00%		H3AXA7              	100.00%
Bootstrap support for P0CS72 as seed ortholog is 100%.
Bootstrap support for H3AXA7 as seed ortholog is 100%.

Group of orthologs #2117. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:57

Q5KMP7              	100.00%		H3B5V9              	100.00%
Bootstrap support for Q5KMP7 as seed ortholog is 100%.
Bootstrap support for H3B5V9 as seed ortholog is 100%.

Group of orthologs #2118. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 L.chalumnae:57

Q5KPI6              	100.00%		M3XHJ1              	100.00%
Bootstrap support for Q5KPI6 as seed ortholog is 100%.
Bootstrap support for M3XHJ1 as seed ortholog is 100%.

Group of orthologs #2119. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:56

Q5K8Y3              	100.00%		H3ABD4              	100.00%
                    	       		H3A8F9              	6.33%
Bootstrap support for Q5K8Y3 as seed ortholog is 100%.
Bootstrap support for H3ABD4 as seed ortholog is 100%.

Group of orthologs #2120. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:56

P0CR66              	100.00%		H3A2K0              	100.00%
Bootstrap support for P0CR66 as seed ortholog is 100%.
Bootstrap support for H3A2K0 as seed ortholog is 100%.

Group of orthologs #2121. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:56

Q5K961              	100.00%		H3A5L6              	100.00%
Bootstrap support for Q5K961 as seed ortholog is 100%.
Bootstrap support for H3A5L6 as seed ortholog is 100%.

Group of orthologs #2122. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:56

Q5KAN1              	100.00%		H3ANS9              	100.00%
Bootstrap support for Q5KAN1 as seed ortholog is 100%.
Bootstrap support for H3ANS9 as seed ortholog is 100%.

Group of orthologs #2123. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 L.chalumnae:56

Q5KD81              	100.00%		H3B1C3              	100.00%
Bootstrap support for Q5KD81 as seed ortholog is 100%.
Bootstrap support for H3B1C3 as seed ortholog is 100%.

Group of orthologs #2124. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 L.chalumnae:55

Q5KGW7              	100.00%		H3AWZ1              	100.00%
                    	       		H3A0S6              	59.09%
                    	       		H3B7Y7              	53.79%
                    	       		H3ATG6              	52.27%
Bootstrap support for Q5KGW7 as seed ortholog is 100%.
Bootstrap support for H3AWZ1 as seed ortholog is 100%.

Group of orthologs #2125. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 L.chalumnae:55

Q5KK23              	100.00%		H3BFM9              	100.00%
Bootstrap support for Q5KK23 as seed ortholog is 100%.
Bootstrap support for H3BFM9 as seed ortholog is 100%.

Group of orthologs #2126. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 L.chalumnae:54

Q5KLV3              	100.00%		H3A5I9              	100.00%
                    	       		H3ARK6              	25.20%
                    	       		H2ZYD4              	24.91%
Bootstrap support for Q5KLV3 as seed ortholog is 100%.
Bootstrap support for H3A5I9 as seed ortholog is 100%.

Group of orthologs #2127. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 L.chalumnae:54

Q5KI44              	100.00%		H3ACP1              	100.00%
                    	       		H2ZU99              	25.48%
Bootstrap support for Q5KI44 as seed ortholog is 100%.
Bootstrap support for H3ACP1 as seed ortholog is 100%.

Group of orthologs #2128. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 L.chalumnae:54

Q5KGX3              	100.00%		H3A2U4              	100.00%
Bootstrap support for Q5KGX3 as seed ortholog is 100%.
Bootstrap support for H3A2U4 as seed ortholog is 100%.

Group of orthologs #2129. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 L.chalumnae:54

Q5KDP7              	100.00%		H3A9U6              	100.00%
Bootstrap support for Q5KDP7 as seed ortholog is 100%.
Bootstrap support for H3A9U6 as seed ortholog is 100%.

Group of orthologs #2130. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 L.chalumnae:54

Q5K8M3              	100.00%		H3B2M9              	100.00%
Bootstrap support for Q5K8M3 as seed ortholog is 100%.
Bootstrap support for H3B2M9 as seed ortholog is 100%.

Group of orthologs #2131. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 L.chalumnae:54

Q5K6Z4              	100.00%		M3XJ13              	100.00%
Bootstrap support for Q5K6Z4 as seed ortholog is 100%.
Bootstrap support for M3XJ13 as seed ortholog is 100%.

Group of orthologs #2132. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 L.chalumnae:53

Q5KMT8              	100.00%		H3BHR8              	100.00%
                    	       		H3BFX7              	29.66%
Bootstrap support for Q5KMT8 as seed ortholog is 100%.
Bootstrap support for H3BHR8 as seed ortholog is 100%.

Group of orthologs #2133. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 L.chalumnae:53

P0CQ32              	100.00%		H3A9E8              	100.00%
Bootstrap support for P0CQ32 as seed ortholog is 100%.
Bootstrap support for H3A9E8 as seed ortholog is 100%.

Group of orthologs #2134. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 L.chalumnae:53

Q5KFH6              	100.00%		H3AD59              	100.00%
Bootstrap support for Q5KFH6 as seed ortholog is 100%.
Bootstrap support for H3AD59 as seed ortholog is 100%.

Group of orthologs #2135. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 L.chalumnae:53

Q5KKY9              	100.00%		H3AEV4              	100.00%
Bootstrap support for Q5KKY9 as seed ortholog is 100%.
Bootstrap support for H3AEV4 as seed ortholog is 100%.

Group of orthologs #2136. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:1 L.chalumnae:53

Q5KKZ1              	100.00%		H3AMQ6              	100.00%
Bootstrap support for Q5KKZ1 as seed ortholog is 49%.
Alternative seed ortholog is Q5KGC6 (1 bits away from this cluster)
Bootstrap support for H3AMQ6 as seed ortholog is 100%.

Group of orthologs #2137. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:52

Q5KLL0              	100.00%		H2ZYV5              	100.00%
                    	       		H3AHC5              	48.15%
                    	       		H3AN94              	38.77%
                    	       		H3BI93              	13.77%
                    	       		H3BDQ8              	10.30%
Bootstrap support for Q5KLL0 as seed ortholog is 100%.
Bootstrap support for H2ZYV5 as seed ortholog is 100%.

Group of orthologs #2138. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:52

Q5K930              	100.00%		H3BB15              	100.00%
                    	       		H3B0D7              	8.05%
Bootstrap support for Q5K930 as seed ortholog is 100%.
Bootstrap support for H3BB15 as seed ortholog is 100%.

Group of orthologs #2139. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:52

Q5K8Y9              	100.00%		H3AA34              	100.00%
Bootstrap support for Q5K8Y9 as seed ortholog is 100%.
Bootstrap support for H3AA34 as seed ortholog is 100%.

Group of orthologs #2140. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:52

Q5KJV4              	100.00%		H3AGA9              	100.00%
Bootstrap support for Q5KJV4 as seed ortholog is 100%.
Bootstrap support for H3AGA9 as seed ortholog is 100%.

Group of orthologs #2141. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 L.chalumnae:52

Q5KFV0              	100.00%		H3B3A3              	100.00%
Bootstrap support for Q5KFV0 as seed ortholog is 100%.
Bootstrap support for H3B3A3 as seed ortholog is 100%.

Group of orthologs #2142. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 L.chalumnae:51

Q5K8R9              	100.00%		H3ADY2              	100.00%
Bootstrap support for Q5K8R9 as seed ortholog is 100%.
Bootstrap support for H3ADY2 as seed ortholog is 100%.

Group of orthologs #2143. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 L.chalumnae:51

Q5KE80              	100.00%		H3A8W3              	100.00%
Bootstrap support for Q5KE80 as seed ortholog is 100%.
Bootstrap support for H3A8W3 as seed ortholog is 100%.

Group of orthologs #2144. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 L.chalumnae:51

Q5KM61              	100.00%		H3AM50              	100.00%
Bootstrap support for Q5KM61 as seed ortholog is 100%.
Bootstrap support for H3AM50 as seed ortholog is 100%.

Group of orthologs #2145. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

Q5KJT0              	100.00%		H3BFW4              	100.00%
                    	       		H3AIK8              	44.62%
                    	       		H2ZVR2              	38.17%
                    	       		H2ZTX9              	31.72%
Bootstrap support for Q5KJT0 as seed ortholog is 100%.
Bootstrap support for H3BFW4 as seed ortholog is 100%.

Group of orthologs #2146. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

P0CR42              	100.00%		H2ZVS1              	100.00%
                    	       		H3AW52              	19.87%
                    	       		H3B8B0              	9.56%
Bootstrap support for P0CR42 as seed ortholog is 100%.
Bootstrap support for H2ZVS1 as seed ortholog is 100%.

Group of orthologs #2147. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

Q5KKA0              	100.00%		H2ZZ56              	100.00%
Bootstrap support for Q5KKA0 as seed ortholog is 100%.
Bootstrap support for H2ZZ56 as seed ortholog is 100%.

Group of orthologs #2148. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

P0CM84              	100.00%		H3AVT1              	100.00%
Bootstrap support for P0CM84 as seed ortholog is 100%.
Bootstrap support for H3AVT1 as seed ortholog is 100%.

Group of orthologs #2149. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

P0CP24              	100.00%		H3B4S7              	100.00%
Bootstrap support for P0CP24 as seed ortholog is 100%.
Bootstrap support for H3B4S7 as seed ortholog is 100%.

Group of orthologs #2150. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

Q5KMR1              	100.00%		H3B851              	100.00%
Bootstrap support for Q5KMR1 as seed ortholog is 100%.
Bootstrap support for H3B851 as seed ortholog is 100%.

Group of orthologs #2151. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

Q5KK53              	100.00%		H3BCV8              	100.00%
Bootstrap support for Q5KK53 as seed ortholog is 100%.
Bootstrap support for H3BCV8 as seed ortholog is 100%.

Group of orthologs #2152. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 L.chalumnae:50

Q5KNQ6              	100.00%		M3XHQ4              	100.00%
Bootstrap support for Q5KNQ6 as seed ortholog is 100%.
Bootstrap support for M3XHQ4 as seed ortholog is 100%.

Group of orthologs #2153. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5K8Q1              	100.00%		H3AIU6              	100.00%
                    	       		H3BBG7              	100.00%
Bootstrap support for Q5K8Q1 as seed ortholog is 100%.
Bootstrap support for H3AIU6 as seed ortholog is 100%.
Bootstrap support for H3BBG7 as seed ortholog is 100%.

Group of orthologs #2154. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KKA6              	100.00%		H3AAH2              	100.00%
                    	       		H3ASK1              	28.61%
Bootstrap support for Q5KKA6 as seed ortholog is 100%.
Bootstrap support for H3AAH2 as seed ortholog is 100%.

Group of orthologs #2155. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5K9B7              	100.00%		H3A4J3              	100.00%
Bootstrap support for Q5K9B7 as seed ortholog is 100%.
Bootstrap support for H3A4J3 as seed ortholog is 100%.

Group of orthologs #2156. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KCZ3              	100.00%		H3A1X6              	100.00%
Bootstrap support for Q5KCZ3 as seed ortholog is 100%.
Bootstrap support for H3A1X6 as seed ortholog is 100%.

Group of orthologs #2157. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KP81              	100.00%		H2ZRK6              	100.00%
Bootstrap support for Q5KP81 as seed ortholog is 100%.
Bootstrap support for H2ZRK6 as seed ortholog is 100%.

Group of orthologs #2158. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:9 L.chalumnae:4

Q5K7H9              	100.00%		H3B1G4              	100.00%
Bootstrap support for Q5K7H9 as seed ortholog is 60%.
Alternative seed ortholog is Q5KAZ1 (9 bits away from this cluster)
Bootstrap support for H3B1G4 as seed ortholog is 63%.
Alternative seed ortholog is M3XHL4 (4 bits away from this cluster)

Group of orthologs #2159. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KF91              	100.00%		H3AYL1              	100.00%
Bootstrap support for Q5KF91 as seed ortholog is 100%.
Bootstrap support for H3AYL1 as seed ortholog is 100%.

Group of orthologs #2160. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5K8C9              	100.00%		H3BHF7              	100.00%
Bootstrap support for Q5K8C9 as seed ortholog is 100%.
Bootstrap support for H3BHF7 as seed ortholog is 100%.

Group of orthologs #2161. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KCT6              	100.00%		H3BD02              	100.00%
Bootstrap support for Q5KCT6 as seed ortholog is 100%.
Bootstrap support for H3BD02 as seed ortholog is 100%.

Group of orthologs #2162. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KA90              	100.00%		M3XJJ6              	100.00%
Bootstrap support for Q5KA90 as seed ortholog is 100%.
Bootstrap support for M3XJJ6 as seed ortholog is 100%.

Group of orthologs #2163. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 L.chalumnae:49

Q5KKT6              	100.00%		H3BGY5              	100.00%
Bootstrap support for Q5KKT6 as seed ortholog is 100%.
Bootstrap support for H3BGY5 as seed ortholog is 100%.

Group of orthologs #2164. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 L.chalumnae:48

Q5KG14              	100.00%		H3AHD6              	100.00%
Bootstrap support for Q5KG14 as seed ortholog is 100%.
Bootstrap support for H3AHD6 as seed ortholog is 100%.

Group of orthologs #2165. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:2

Q5KDM4              	100.00%		H3BA88              	100.00%
                    	       		H3AJN7              	27.92%
                    	       		H3BCQ4              	27.46%
                    	       		H3B4Z6              	26.54%
                    	       		H3B559              	20.14%
                    	       		H3B514              	5.84%
Bootstrap support for Q5KDM4 as seed ortholog is 100%.
Bootstrap support for H3BA88 as seed ortholog is 62%.
Alternative seed ortholog is H3AX35 (2 bits away from this cluster)

Group of orthologs #2166. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:47

Q5K946              	100.00%		H3AL58              	100.00%
                    	       		H2ZZZ7              	35.95%
Bootstrap support for Q5K946 as seed ortholog is 100%.
Bootstrap support for H3AL58 as seed ortholog is 100%.

Group of orthologs #2167. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:47

Q5KDX2              	100.00%		H3A8S8              	100.00%
Bootstrap support for Q5KDX2 as seed ortholog is 100%.
Bootstrap support for H3A8S8 as seed ortholog is 100%.

Group of orthologs #2168. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:47

Q5KLX9              	100.00%		H3A1N9              	100.00%
Bootstrap support for Q5KLX9 as seed ortholog is 100%.
Bootstrap support for H3A1N9 as seed ortholog is 100%.

Group of orthologs #2169. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:47

Q5K7U9              	100.00%		H3AKM0              	100.00%
Bootstrap support for Q5K7U9 as seed ortholog is 100%.
Bootstrap support for H3AKM0 as seed ortholog is 100%.

Group of orthologs #2170. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 L.chalumnae:47

Q5KPE2              	100.00%		H3BFV0              	100.00%
Bootstrap support for Q5KPE2 as seed ortholog is 100%.
Bootstrap support for H3BFV0 as seed ortholog is 100%.

Group of orthologs #2171. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 L.chalumnae:45

Q5KBA1              	100.00%		H2ZWG7              	100.00%
                    	       		H3BAU8              	45.08%
                    	       		H3AZC8              	34.22%
                    	       		H3AVA2              	19.67%
Bootstrap support for Q5KBA1 as seed ortholog is 100%.
Bootstrap support for H2ZWG7 as seed ortholog is 100%.

Group of orthologs #2172. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 L.chalumnae:45

Q5KNL2              	100.00%		M3XIP5              	100.00%
Q5KBC6              	9.52%		
Bootstrap support for Q5KNL2 as seed ortholog is 100%.
Bootstrap support for M3XIP5 as seed ortholog is 100%.

Group of orthologs #2173. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 L.chalumnae:45

Q5KAY2              	100.00%		H2ZX00              	100.00%
Bootstrap support for Q5KAY2 as seed ortholog is 100%.
Bootstrap support for H2ZX00 as seed ortholog is 100%.

Group of orthologs #2174. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 L.chalumnae:45

Q5KDC0              	100.00%		H2ZUN8              	100.00%
Bootstrap support for Q5KDC0 as seed ortholog is 100%.
Bootstrap support for H2ZUN8 as seed ortholog is 100%.

Group of orthologs #2175. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 L.chalumnae:45

Q5KH89              	100.00%		H3AW30              	100.00%
Bootstrap support for Q5KH89 as seed ortholog is 100%.
Bootstrap support for H3AW30 as seed ortholog is 100%.

Group of orthologs #2176. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 L.chalumnae:44

Q5K8V2              	100.00%		H3AEL2              	100.00%
Q5K8U9              	22.09%		H3AE92              	60.41%
Q5KCG9              	19.83%		
Bootstrap support for Q5K8V2 as seed ortholog is 100%.
Bootstrap support for H3AEL2 as seed ortholog is 100%.

Group of orthologs #2177. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 L.chalumnae:44

Q5KAA9              	100.00%		H3A5X5              	100.00%
Bootstrap support for Q5KAA9 as seed ortholog is 100%.
Bootstrap support for H3A5X5 as seed ortholog is 100%.

Group of orthologs #2178. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 L.chalumnae:44

Q5KHR4              	100.00%		H3BCJ8              	100.00%
Bootstrap support for Q5KHR4 as seed ortholog is 100%.
Bootstrap support for H3BCJ8 as seed ortholog is 100%.

Group of orthologs #2179. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 L.chalumnae:43

Q5KPW0              	100.00%		H3AC25              	100.00%
                    	       		H3BII7              	56.30%
Bootstrap support for Q5KPW0 as seed ortholog is 100%.
Bootstrap support for H3AC25 as seed ortholog is 100%.

Group of orthologs #2180. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 L.chalumnae:43

Q5K8B3              	100.00%		H3B2D0              	100.00%
                    	       		H3AS18              	22.67%
Bootstrap support for Q5K8B3 as seed ortholog is 100%.
Bootstrap support for H3B2D0 as seed ortholog is 100%.

Group of orthologs #2181. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 L.chalumnae:43

Q5KQ25              	100.00%		H3AMC2              	100.00%
                    	       		M3XL56              	39.26%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for H3AMC2 as seed ortholog is 100%.

Group of orthologs #2182. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 L.chalumnae:43

Q5KEZ4              	100.00%		H3BEZ7              	100.00%
Bootstrap support for Q5KEZ4 as seed ortholog is 100%.
Bootstrap support for H3BEZ7 as seed ortholog is 100%.

Group of orthologs #2183. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 L.chalumnae:42

Q5KI39              	100.00%		H2ZS72              	100.00%
Bootstrap support for Q5KI39 as seed ortholog is 100%.
Bootstrap support for H2ZS72 as seed ortholog is 100%.

Group of orthologs #2184. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:41

Q5KB75              	100.00%		H2ZVF3              	100.00%
Bootstrap support for Q5KB75 as seed ortholog is 100%.
Bootstrap support for H2ZVF3 as seed ortholog is 100%.

Group of orthologs #2185. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 L.chalumnae:41

Q5KF85              	100.00%		M3XIX3              	100.00%
Bootstrap support for Q5KF85 as seed ortholog is 100%.
Bootstrap support for M3XIX3 as seed ortholog is 100%.