###################################
1042 groups of orthologs
1118 in-paralogs from C.neoformans
1528 in-paralogs from E.histolytica
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2928 bits
Score difference with first non-orthologous sequence - C.neoformans:2928 E.histolytica:2928

Q5KPW2              	100.00%		C4M6K0              	100.00%
Bootstrap support for Q5KPW2 as seed ortholog is 100%.
Bootstrap support for C4M6K0 as seed ortholog is 100%.

Group of orthologs #2. Best score 1785 bits
Score difference with first non-orthologous sequence - C.neoformans:1785 E.histolytica:1785

Q5KAK5              	100.00%		C4LSF8              	100.00%
Bootstrap support for Q5KAK5 as seed ortholog is 100%.
Bootstrap support for C4LSF8 as seed ortholog is 100%.

Group of orthologs #3. Best score 1243 bits
Score difference with first non-orthologous sequence - C.neoformans:1243 E.histolytica:1243

Q5KEY7              	100.00%		C4M249              	100.00%
                    	       		C4LW70              	13.74%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for C4M249 as seed ortholog is 100%.

Group of orthologs #4. Best score 1177 bits
Score difference with first non-orthologous sequence - C.neoformans:1177 E.histolytica:1177

Q5KC33              	100.00%		C4M3E3              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for C4M3E3 as seed ortholog is 100%.

Group of orthologs #5. Best score 1140 bits
Score difference with first non-orthologous sequence - C.neoformans:1140 E.histolytica:1140

Q5KFV9              	100.00%		C4M626              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for C4M626 as seed ortholog is 100%.

Group of orthologs #6. Best score 1102 bits
Score difference with first non-orthologous sequence - C.neoformans:1102 E.histolytica:1102

Q5KP97              	100.00%		Q6RCM0              	100.00%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for Q6RCM0 as seed ortholog is 100%.

Group of orthologs #7. Best score 1075 bits
Score difference with first non-orthologous sequence - C.neoformans:424 E.histolytica:51

Q5KET5              	100.00%		C4LTD0              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for C4LTD0 as seed ortholog is 71%.
Alternative seed ortholog is C4LXH6 (51 bits away from this cluster)

Group of orthologs #8. Best score 1045 bits
Score difference with first non-orthologous sequence - C.neoformans:790 E.histolytica:1045

Q5KPM2              	100.00%		C4LY19              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for C4LY19 as seed ortholog is 100%.

Group of orthologs #9. Best score 1041 bits
Score difference with first non-orthologous sequence - C.neoformans:856 E.histolytica:1041

Q5KHJ9              	100.00%		B1N3D6              	100.00%
                    	       		C4M4N3              	99.70%
                    	       		B1N306              	97.15%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for B1N3D6 as seed ortholog is 100%.

Group of orthologs #10. Best score 997 bits
Score difference with first non-orthologous sequence - C.neoformans:544 E.histolytica:10

Q5KA71              	100.00%		C4LY22              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for C4LY22 as seed ortholog is 60%.
Alternative seed ortholog is C4LTC5 (10 bits away from this cluster)

Group of orthologs #11. Best score 980 bits
Score difference with first non-orthologous sequence - C.neoformans:685 E.histolytica:980

Q5K9W1              	100.00%		C4M0E2              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for C4M0E2 as seed ortholog is 100%.

Group of orthologs #12. Best score 961 bits
Score difference with first non-orthologous sequence - C.neoformans:961 E.histolytica:961

Q5KIF6              	100.00%		C4M3E6              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for C4M3E6 as seed ortholog is 100%.

Group of orthologs #13. Best score 960 bits
Score difference with first non-orthologous sequence - C.neoformans:960 E.histolytica:960

Q5KGG3              	100.00%		Q6IUR3              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for Q6IUR3 as seed ortholog is 100%.

Group of orthologs #14. Best score 936 bits
Score difference with first non-orthologous sequence - C.neoformans:513 E.histolytica:470

Q5K7R6              	100.00%		C4LVB2              	100.00%
                    	       		C4MBP1              	100.00%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for C4LVB2 as seed ortholog is 100%.
Bootstrap support for C4MBP1 as seed ortholog is 100%.

Group of orthologs #15. Best score 933 bits
Score difference with first non-orthologous sequence - C.neoformans:181 E.histolytica:218

Q5KKM4              	100.00%		C4M3S5              	100.00%
Q5KKP4              	81.79%		B1N486              	33.88%
                    	       		C4M9V9              	33.88%
                    	       		C4M1G4              	31.97%
                    	       		C4LZ45              	30.60%
Bootstrap support for Q5KKM4 as seed ortholog is 99%.
Bootstrap support for C4M3S5 as seed ortholog is 100%.

Group of orthologs #16. Best score 904 bits
Score difference with first non-orthologous sequence - C.neoformans:753 E.histolytica:904

Q5KMF6              	100.00%		C4M431              	100.00%
                    	       		B1N511              	38.04%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for C4M431 as seed ortholog is 100%.

Group of orthologs #17. Best score 861 bits
Score difference with first non-orthologous sequence - C.neoformans:861 E.histolytica:861

Q5KIB7              	100.00%		C4LUK7              	100.00%
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for C4LUK7 as seed ortholog is 100%.

Group of orthologs #18. Best score 849 bits
Score difference with first non-orthologous sequence - C.neoformans:268 E.histolytica:384

Q5KJ25              	100.00%		C4M6S9              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for C4M6S9 as seed ortholog is 100%.

Group of orthologs #19. Best score 845 bits
Score difference with first non-orthologous sequence - C.neoformans:845 E.histolytica:845

Q5KBW5              	100.00%		C4MAD8              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for C4MAD8 as seed ortholog is 100%.

Group of orthologs #20. Best score 833 bits
Score difference with first non-orthologous sequence - C.neoformans:262 E.histolytica:418

Q5KHW3              	100.00%		C4M010              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for C4M010 as seed ortholog is 100%.

Group of orthologs #21. Best score 830 bits
Score difference with first non-orthologous sequence - C.neoformans:329 E.histolytica:640

Q5KN49              	100.00%		C4M3B2              	100.00%
                    	       		C4M422              	52.11%
                    	       		C4LVN6              	49.59%
                    	       		C4M3W0              	48.48%
Bootstrap support for Q5KN49 as seed ortholog is 100%.
Bootstrap support for C4M3B2 as seed ortholog is 100%.

Group of orthologs #22. Best score 827 bits
Score difference with first non-orthologous sequence - C.neoformans:413 E.histolytica:171

Q5KD67              	100.00%		Q9Y088              	100.00%
                    	       		C4LUG5              	25.91%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for Q9Y088 as seed ortholog is 99%.

Group of orthologs #23. Best score 825 bits
Score difference with first non-orthologous sequence - C.neoformans:825 E.histolytica:825

Q5KEV8              	100.00%		C4MAB3              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for C4MAB3 as seed ortholog is 100%.

Group of orthologs #24. Best score 821 bits
Score difference with first non-orthologous sequence - C.neoformans:821 E.histolytica:821

Q5K7U0              	100.00%		C4M6P0              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for C4M6P0 as seed ortholog is 100%.

Group of orthologs #25. Best score 783 bits
Score difference with first non-orthologous sequence - C.neoformans:239 E.histolytica:316

Q5KKN7              	100.00%		C4LT60              	100.00%
Bootstrap support for Q5KKN7 as seed ortholog is 100%.
Bootstrap support for C4LT60 as seed ortholog is 100%.

Group of orthologs #26. Best score 783 bits
Score difference with first non-orthologous sequence - C.neoformans:714 E.histolytica:783

Q5KGV5              	100.00%		Q24802              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for Q24802 as seed ortholog is 100%.

Group of orthologs #27. Best score 781 bits
Score difference with first non-orthologous sequence - C.neoformans:781 E.histolytica:781

Q5K754              	100.00%		C4M438              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for C4M438 as seed ortholog is 100%.

Group of orthologs #28. Best score 761 bits
Score difference with first non-orthologous sequence - C.neoformans:150 E.histolytica:761

Q5KPH0              	100.00%		B1N3X2              	100.00%
                    	       		B1N2L8              	100.00%
                    	       		C4MB78              	99.89%
                    	       		B1N523              	99.67%
                    	       		B1N3R1              	99.56%
                    	       		B1N4V0              	99.23%
Bootstrap support for Q5KPH0 as seed ortholog is 99%.
Bootstrap support for B1N3X2 as seed ortholog is 100%.
Bootstrap support for B1N2L8 as seed ortholog is 100%.

Group of orthologs #29. Best score 758 bits
Score difference with first non-orthologous sequence - C.neoformans:758 E.histolytica:430

Q5KF07              	100.00%		C4LWJ2              	100.00%
                    	       		C4M3I0              	38.90%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for C4LWJ2 as seed ortholog is 100%.

Group of orthologs #30. Best score 753 bits
Score difference with first non-orthologous sequence - C.neoformans:265 E.histolytica:753

Q5KGT3              	100.00%		C4M5M5              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for C4M5M5 as seed ortholog is 100%.

Group of orthologs #31. Best score 747 bits
Score difference with first non-orthologous sequence - C.neoformans:747 E.histolytica:747

P0CP00              	100.00%		C4LUC7              	100.00%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for C4LUC7 as seed ortholog is 100%.

Group of orthologs #32. Best score 737 bits
Score difference with first non-orthologous sequence - C.neoformans:609 E.histolytica:737

Q5KBW0              	100.00%		Q4VSM4              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for Q4VSM4 as seed ortholog is 100%.

Group of orthologs #33. Best score 729 bits
Score difference with first non-orthologous sequence - C.neoformans:665 E.histolytica:666

Q5KN88              	100.00%		B1N3P0              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for B1N3P0 as seed ortholog is 100%.

Group of orthologs #34. Best score 723 bits
Score difference with first non-orthologous sequence - C.neoformans:723 E.histolytica:723

Q5KA48              	100.00%		C4LXB9              	100.00%
Bootstrap support for Q5KA48 as seed ortholog is 100%.
Bootstrap support for C4LXB9 as seed ortholog is 100%.

Group of orthologs #35. Best score 711 bits
Score difference with first non-orthologous sequence - C.neoformans:711 E.histolytica:711

Q5KJI1              	100.00%		C4LU72              	100.00%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for C4LU72 as seed ortholog is 100%.

Group of orthologs #36. Best score 698 bits
Score difference with first non-orthologous sequence - C.neoformans:698 E.histolytica:698

Q5KG64              	100.00%		C4LUU5              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for C4LUU5 as seed ortholog is 100%.

Group of orthologs #37. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:256 E.histolytica:320

Q5KP06              	100.00%		B1N2P0              	100.00%
                    	       		B1N621              	6.38%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for B1N2P0 as seed ortholog is 100%.

Group of orthologs #38. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:671 E.histolytica:468

Q5KPX3              	100.00%		C4M7T9              	100.00%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for C4M7T9 as seed ortholog is 100%.

Group of orthologs #39. Best score 658 bits
Score difference with first non-orthologous sequence - C.neoformans:658 E.histolytica:658

P0CN82              	100.00%		C4M384              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for C4M384 as seed ortholog is 100%.

Group of orthologs #40. Best score 655 bits
Score difference with first non-orthologous sequence - C.neoformans:372 E.histolytica:655

Q5K8Q4              	100.00%		C4LZY3              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for C4LZY3 as seed ortholog is 100%.

Group of orthologs #41. Best score 653 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:96

Q5KP96              	100.00%		C4LW20              	100.00%
Bootstrap support for Q5KP96 as seed ortholog is 90%.
Bootstrap support for C4LW20 as seed ortholog is 91%.

Group of orthologs #42. Best score 649 bits
Score difference with first non-orthologous sequence - C.neoformans:649 E.histolytica:649

Q5KBP7              	100.00%		C4LYN6              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for C4LYN6 as seed ortholog is 100%.

Group of orthologs #43. Best score 648 bits
Score difference with first non-orthologous sequence - C.neoformans:474 E.histolytica:447

P0CN30              	100.00%		C4M7D4              	100.00%
                    	       		C4MAC9              	98.35%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for C4M7D4 as seed ortholog is 100%.

Group of orthologs #44. Best score 644 bits
Score difference with first non-orthologous sequence - C.neoformans:187 E.histolytica:30

Q5KJN9              	100.00%		C4M0V2              	100.00%
Bootstrap support for Q5KJN9 as seed ortholog is 99%.
Bootstrap support for C4M0V2 as seed ortholog is 69%.
Alternative seed ortholog is B1N2M5 (30 bits away from this cluster)

Group of orthologs #45. Best score 634 bits
Score difference with first non-orthologous sequence - C.neoformans:177 E.histolytica:206

Q5KEX1              	100.00%		C4LWD6              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 99%.
Bootstrap support for C4LWD6 as seed ortholog is 99%.

Group of orthologs #46. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:629 E.histolytica:629

Q5KDF5              	100.00%		C4LUH6              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for C4LUH6 as seed ortholog is 100%.

Group of orthologs #47. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 E.histolytica:628

Q5K9S3              	100.00%		C4LSP0              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for C4LSP0 as seed ortholog is 100%.

Group of orthologs #48. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 E.histolytica:628

Q5KMU3              	100.00%		C4LVL5              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for C4LVL5 as seed ortholog is 100%.

Group of orthologs #49. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:508 E.histolytica:626

Q5KMN3              	100.00%		C4LX06              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for C4LX06 as seed ortholog is 100%.

Group of orthologs #50. Best score 614 bits
Score difference with first non-orthologous sequence - C.neoformans:349 E.histolytica:213

Q5KLI3              	100.00%		C4LUQ2              	100.00%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for C4LUQ2 as seed ortholog is 99%.

Group of orthologs #51. Best score 607 bits
Score difference with first non-orthologous sequence - C.neoformans:607 E.histolytica:607

Q5KLU5              	100.00%		Q5V9E8              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for Q5V9E8 as seed ortholog is 100%.

Group of orthologs #52. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:606 E.histolytica:606

Q5KQ47              	100.00%		C4LW96              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for C4LW96 as seed ortholog is 100%.

Group of orthologs #53. Best score 605 bits
Score difference with first non-orthologous sequence - C.neoformans:605 E.histolytica:327

Q5KDY4              	100.00%		C4LYY1              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for C4LYY1 as seed ortholog is 100%.

Group of orthologs #54. Best score 598 bits
Score difference with first non-orthologous sequence - C.neoformans:598 E.histolytica:598

Q5KIH7              	100.00%		C4M1X5              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for C4M1X5 as seed ortholog is 100%.

Group of orthologs #55. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:398 E.histolytica:85

Q5KBX3              	100.00%		C4LW36              	100.00%
Bootstrap support for Q5KBX3 as seed ortholog is 100%.
Bootstrap support for C4LW36 as seed ortholog is 94%.

Group of orthologs #56. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:596 E.histolytica:596

Q5KH77              	100.00%		C4M777              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for C4M777 as seed ortholog is 100%.

Group of orthologs #57. Best score 595 bits
Score difference with first non-orthologous sequence - C.neoformans:495 E.histolytica:595

Q5KIQ1              	100.00%		B1N373              	100.00%
                    	       		C4M7P1              	99.70%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for B1N373 as seed ortholog is 100%.

Group of orthologs #58. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:592 E.histolytica:380

Q5K9H1              	100.00%		C4M2E4              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for C4M2E4 as seed ortholog is 100%.

Group of orthologs #59. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 E.histolytica:426

Q5KLE4              	100.00%		Q1EQ29              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for Q1EQ29 as seed ortholog is 100%.

Group of orthologs #60. Best score 588 bits
Score difference with first non-orthologous sequence - C.neoformans:588 E.histolytica:320

Q5KLP9              	100.00%		C4LYN5              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for C4LYN5 as seed ortholog is 100%.

Group of orthologs #61. Best score 585 bits
Score difference with first non-orthologous sequence - C.neoformans:585 E.histolytica:292

P0CR22              	100.00%		C4MA02              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for C4MA02 as seed ortholog is 99%.

Group of orthologs #62. Best score 583 bits
Score difference with first non-orthologous sequence - C.neoformans:583 E.histolytica:583

Q5KPI3              	100.00%		C4M759              	100.00%
                    	       		B1N2H1              	82.27%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for C4M759 as seed ortholog is 100%.

Group of orthologs #63. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 E.histolytica:579

Q5KKQ6              	100.00%		C4M9R3              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for C4M9R3 as seed ortholog is 100%.

Group of orthologs #64. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:162 E.histolytica:138

Q5KNC4              	100.00%		C4M7P3              	100.00%
Bootstrap support for Q5KNC4 as seed ortholog is 99%.
Bootstrap support for C4M7P3 as seed ortholog is 99%.

Group of orthologs #65. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 E.histolytica:200

Q5KE94              	100.00%		C4M419              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for C4M419 as seed ortholog is 100%.

Group of orthologs #66. Best score 570 bits
Score difference with first non-orthologous sequence - C.neoformans:570 E.histolytica:570

Q5KJ33              	100.00%		C4MAJ9              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for C4MAJ9 as seed ortholog is 100%.

Group of orthologs #67. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 E.histolytica:355

Q5KP40              	100.00%		C4LVH2              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for C4LVH2 as seed ortholog is 100%.

Group of orthologs #68. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:426 E.histolytica:435

Q5KDL3              	100.00%		B1N4Q6              	100.00%
                    	       		C4M846              	99.62%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for B1N4Q6 as seed ortholog is 100%.

Group of orthologs #69. Best score 563 bits
Score difference with first non-orthologous sequence - C.neoformans:423 E.histolytica:422

Q5KGN2              	100.00%		C4M285              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 100%.
Bootstrap support for C4M285 as seed ortholog is 100%.

Group of orthologs #70. Best score 559 bits
Score difference with first non-orthologous sequence - C.neoformans:220 E.histolytica:416

Q5KIC0              	100.00%		C4M1F1              	100.00%
                    	       		C4M2K1              	100.00%
                    	       		C4M3X0              	79.71%
Bootstrap support for Q5KIC0 as seed ortholog is 99%.
Bootstrap support for C4M1F1 as seed ortholog is 100%.
Bootstrap support for C4M2K1 as seed ortholog is 100%.

Group of orthologs #71. Best score 556 bits
Score difference with first non-orthologous sequence - C.neoformans:74 E.histolytica:18

Q5K8W5              	100.00%		B1N431              	100.00%
                    	       		B1N4X0              	97.57%
                    	       		C4MBK4              	97.24%
                    	       		B1N4K7              	68.88%
                    	       		B1N4M9              	51.86%
                    	       		B1N5P9              	25.12%
Bootstrap support for Q5K8W5 as seed ortholog is 96%.
Bootstrap support for B1N431 as seed ortholog is 67%.
Alternative seed ortholog is C4M770 (18 bits away from this cluster)

Group of orthologs #72. Best score 551 bits
Score difference with first non-orthologous sequence - C.neoformans:551 E.histolytica:173

Q5KEH7              	100.00%		Q1EQ31              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for Q1EQ31 as seed ortholog is 99%.

Group of orthologs #73. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 E.histolytica:508

P0CR38              	100.00%		Q1EQ50              	100.00%
                    	       		Q1EQ49              	12.81%
Bootstrap support for P0CR38 as seed ortholog is 100%.
Bootstrap support for Q1EQ50 as seed ortholog is 100%.

Group of orthologs #74. Best score 546 bits
Score difference with first non-orthologous sequence - C.neoformans:546 E.histolytica:14

Q5K906              	100.00%		Q1EQ27              	100.00%
Q5KDA3              	99.67%		
Bootstrap support for Q5K906 as seed ortholog is 100%.
Bootstrap support for Q1EQ27 as seed ortholog is 47%.
Alternative seed ortholog is B1N2V8 (14 bits away from this cluster)

Group of orthologs #75. Best score 543 bits
Score difference with first non-orthologous sequence - C.neoformans:543 E.histolytica:543

Q5KKE7              	100.00%		C4LUJ0              	100.00%
                    	       		C4LYA3              	55.47%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for C4LUJ0 as seed ortholog is 100%.

Group of orthologs #76. Best score 540 bits
Score difference with first non-orthologous sequence - C.neoformans:540 E.histolytica:540

Q5KJI4              	100.00%		C4M5S9              	100.00%
                    	       		B1N3E8              	65.51%
Bootstrap support for Q5KJI4 as seed ortholog is 100%.
Bootstrap support for C4M5S9 as seed ortholog is 100%.

Group of orthologs #77. Best score 538 bits
Score difference with first non-orthologous sequence - C.neoformans:538 E.histolytica:538

Q5KJ21              	100.00%		C4M818              	100.00%
                    	       		B1N3S8              	92.37%
                    	       		C4MAC4              	54.44%
                    	       		B1N5J9              	49.19%
Bootstrap support for Q5KJ21 as seed ortholog is 100%.
Bootstrap support for C4M818 as seed ortholog is 100%.

Group of orthologs #78. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:382 E.histolytica:535

Q5KAP2              	100.00%		C4M8D7              	100.00%
                    	       		B1N4G1              	72.95%
Bootstrap support for Q5KAP2 as seed ortholog is 100%.
Bootstrap support for C4M8D7 as seed ortholog is 100%.

Group of orthologs #79. Best score 531 bits
Score difference with first non-orthologous sequence - C.neoformans:531 E.histolytica:531

Q5KIH6              	100.00%		C4M8E1              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for C4M8E1 as seed ortholog is 100%.

Group of orthologs #80. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:390 E.histolytica:529

Q5KLV5              	100.00%		C4LY36              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for C4LY36 as seed ortholog is 100%.

Group of orthologs #81. Best score 527 bits
Score difference with first non-orthologous sequence - C.neoformans:444 E.histolytica:527

Q5KI46              	100.00%		C4M2K7              	100.00%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for C4M2K7 as seed ortholog is 100%.

Group of orthologs #82. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:164 E.histolytica:275

Q5KCR8              	100.00%		C4LTA8              	100.00%
Bootstrap support for Q5KCR8 as seed ortholog is 99%.
Bootstrap support for C4LTA8 as seed ortholog is 100%.

Group of orthologs #83. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:524 E.histolytica:524

Q5K6X3              	100.00%		C4LZL9              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for C4LZL9 as seed ortholog is 100%.

Group of orthologs #84. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:524 E.histolytica:261

Q5KFJ3              	100.00%		C4M2D0              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for C4M2D0 as seed ortholog is 100%.

Group of orthologs #85. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:520 E.histolytica:520

Q5KJ87              	100.00%		C4LU18              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for C4LU18 as seed ortholog is 100%.

Group of orthologs #86. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:519 E.histolytica:519

Q5KM80              	100.00%		C4LTU9              	100.00%
Bootstrap support for Q5KM80 as seed ortholog is 100%.
Bootstrap support for C4LTU9 as seed ortholog is 100%.

Group of orthologs #87. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:519 E.histolytica:519

Q5KL42              	100.00%		C4LW75              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for C4LW75 as seed ortholog is 100%.

Group of orthologs #88. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:445 E.histolytica:519

Q5KIW8              	100.00%		C4MAU7              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for C4MAU7 as seed ortholog is 100%.

Group of orthologs #89. Best score 516 bits
Score difference with first non-orthologous sequence - C.neoformans:252 E.histolytica:269

P0CQ84              	100.00%		C4M8U4              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for C4M8U4 as seed ortholog is 100%.

Group of orthologs #90. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 E.histolytica:174

P0CL88              	100.00%		B1N3S5              	100.00%
                    	       		C4MB40              	74.65%
                    	       		C4M8Q3              	24.57%
Bootstrap support for P0CL88 as seed ortholog is 100%.
Bootstrap support for B1N3S5 as seed ortholog is 100%.

Group of orthologs #91. Best score 514 bits
Score difference with first non-orthologous sequence - C.neoformans:514 E.histolytica:514

Q5KKH8              	100.00%		C4LXY5              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for C4LXY5 as seed ortholog is 100%.

Group of orthologs #92. Best score 513 bits
Score difference with first non-orthologous sequence - C.neoformans:513 E.histolytica:219

Q5K7N5              	100.00%		C4M9H9              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for C4M9H9 as seed ortholog is 99%.

Group of orthologs #93. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 E.histolytica:288

Q5KPQ9              	100.00%		C4LVA7              	100.00%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for C4LVA7 as seed ortholog is 100%.

Group of orthologs #94. Best score 511 bits
Score difference with first non-orthologous sequence - C.neoformans:271 E.histolytica:511

P0CQ98              	100.00%		C4LXN8              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for C4LXN8 as seed ortholog is 100%.

Group of orthologs #95. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 E.histolytica:508

Q5KKV8              	100.00%		C4LX84              	100.00%
                    	       		C4M3R5              	7.40%
Bootstrap support for Q5KKV8 as seed ortholog is 100%.
Bootstrap support for C4LX84 as seed ortholog is 100%.

Group of orthologs #96. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:123 E.histolytica:112

Q5KAU0              	100.00%		C4M3B1              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 99%.
Bootstrap support for C4M3B1 as seed ortholog is 99%.

Group of orthologs #97. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:507

Q5KLA7              	100.00%		C4LXE8              	100.00%
Bootstrap support for Q5KLA7 as seed ortholog is 97%.
Bootstrap support for C4LXE8 as seed ortholog is 100%.

Group of orthologs #98. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:505 E.histolytica:505

Q5KGS9              	100.00%		C4M8X7              	100.00%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for C4M8X7 as seed ortholog is 100%.

Group of orthologs #99. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:391 E.histolytica:503

Q5KQ62              	100.00%		C4LWB7              	100.00%
Bootstrap support for Q5KQ62 as seed ortholog is 100%.
Bootstrap support for C4LWB7 as seed ortholog is 100%.

Group of orthologs #100. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:503 E.histolytica:503

Q5KLD7              	100.00%		C4M2G9              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for C4M2G9 as seed ortholog is 100%.

Group of orthologs #101. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 E.histolytica:500

Q5KM62              	100.00%		C4M2N0              	100.00%
                    	       		C4LYU0              	94.70%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for C4M2N0 as seed ortholog is 100%.

Group of orthologs #102. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 E.histolytica:498

P0CR28              	100.00%		C4M7P4              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for C4M7P4 as seed ortholog is 100%.

Group of orthologs #103. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 E.histolytica:239

Q5KLG5              	100.00%		Q6R8Y2              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for Q6R8Y2 as seed ortholog is 99%.

Group of orthologs #104. Best score 493 bits
Score difference with first non-orthologous sequence - C.neoformans:493 E.histolytica:493

Q5KFS5              	100.00%		C4LXL0              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for C4LXL0 as seed ortholog is 100%.

Group of orthologs #105. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:488 E.histolytica:488

Q5KEU7              	100.00%		C4LYS4              	100.00%
Bootstrap support for Q5KEU7 as seed ortholog is 100%.
Bootstrap support for C4LYS4 as seed ortholog is 100%.

Group of orthologs #106. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:336 E.histolytica:265

Q5KA27              	100.00%		C4LZW8              	100.00%
Bootstrap support for Q5KA27 as seed ortholog is 100%.
Bootstrap support for C4LZW8 as seed ortholog is 100%.

Group of orthologs #107. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 E.histolytica:484

Q5KP62              	100.00%		C4M272              	100.00%
                    	       		B1N3M4              	87.35%
                    	       		B1N378              	83.95%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for C4M272 as seed ortholog is 100%.

Group of orthologs #108. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:340 E.histolytica:483

Q5K7R3              	100.00%		C4M3C0              	100.00%
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for C4M3C0 as seed ortholog is 100%.

Group of orthologs #109. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 E.histolytica:392

Q5K7B5              	100.00%		C4LU66              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for C4LU66 as seed ortholog is 100%.

Group of orthologs #110. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:378 E.histolytica:480

Q5KBB1              	100.00%		C4M7X2              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for C4M7X2 as seed ortholog is 100%.

Group of orthologs #111. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:201 E.histolytica:240

Q5KB93              	100.00%		C4M5I6              	100.00%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for C4M5I6 as seed ortholog is 100%.

Group of orthologs #112. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:225 E.histolytica:51

P0CQ72              	100.00%		C4M394              	100.00%
P0CQ70              	18.79%		
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for C4M394 as seed ortholog is 95%.

Group of orthologs #113. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 E.histolytica:475

Q5KJR9              	100.00%		C4LSV8              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for C4LSV8 as seed ortholog is 100%.

Group of orthologs #114. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 E.histolytica:470

Q5KEK9              	100.00%		B1N309              	100.00%
                    	       		C4M1Y2              	99.76%
Bootstrap support for Q5KEK9 as seed ortholog is 100%.
Bootstrap support for B1N309 as seed ortholog is 100%.

Group of orthologs #115. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:469 E.histolytica:469

Q5KIS3              	100.00%		C4M2F5              	100.00%
Bootstrap support for Q5KIS3 as seed ortholog is 100%.
Bootstrap support for C4M2F5 as seed ortholog is 100%.

Group of orthologs #116. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:467 E.histolytica:467

Q5KBI1              	100.00%		C4LVW6              	100.00%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for C4LVW6 as seed ortholog is 100%.

Group of orthologs #117. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:163 E.histolytica:462

P0CN74              	100.00%		C4LVR9              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 100%.
Bootstrap support for C4LVR9 as seed ortholog is 100%.

Group of orthologs #118. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 E.histolytica:461

Q5KQ22              	100.00%		C4M1P6              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for C4M1P6 as seed ortholog is 100%.

Group of orthologs #119. Best score 455 bits
Score difference with first non-orthologous sequence - C.neoformans:231 E.histolytica:285

Q5KHV9              	100.00%		C4LWT9              	100.00%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for C4LWT9 as seed ortholog is 100%.

Group of orthologs #120. Best score 455 bits
Score difference with first non-orthologous sequence - C.neoformans:134 E.histolytica:455

Q5KKP2              	100.00%		C4M8N6              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 97%.
Bootstrap support for C4M8N6 as seed ortholog is 100%.

Group of orthologs #121. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:234 E.histolytica:37

Q5KII1              	100.00%		C4LVM6              	100.00%
Bootstrap support for Q5KII1 as seed ortholog is 99%.
Bootstrap support for C4LVM6 as seed ortholog is 77%.

Group of orthologs #122. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:9 E.histolytica:341

Q5KNV9              	100.00%		C4M1V7              	100.00%
Bootstrap support for Q5KNV9 as seed ortholog is 54%.
Alternative seed ortholog is Q5KCV6 (9 bits away from this cluster)
Bootstrap support for C4M1V7 as seed ortholog is 100%.

Group of orthologs #123. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:222 E.histolytica:345

Q5K7E4              	100.00%		C4LXE7              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 99%.
Bootstrap support for C4LXE7 as seed ortholog is 100%.

Group of orthologs #124. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:300 E.histolytica:335

Q5KDW0              	100.00%		Q1EQ17              	100.00%
                    	       		B1N4M5              	10.92%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for Q1EQ17 as seed ortholog is 100%.

Group of orthologs #125. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 E.histolytica:451

Q5K7P1              	100.00%		C4LUG9              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for C4LUG9 as seed ortholog is 100%.

Group of orthologs #126. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 E.histolytica:451

P0CR26              	100.00%		C4M2G5              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for C4M2G5 as seed ortholog is 100%.

Group of orthologs #127. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:447 E.histolytica:447

Q5KE01              	100.00%		C4M192              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for C4M192 as seed ortholog is 100%.

Group of orthologs #128. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 E.histolytica:176

Q5KQ07              	100.00%		C4LVK4              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for C4LVK4 as seed ortholog is 99%.

Group of orthologs #129. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:445 E.histolytica:159

Q5KAU9              	100.00%		C4LZR4              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for C4LZR4 as seed ortholog is 99%.

Group of orthologs #130. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:342 E.histolytica:444

Q5KHJ1              	100.00%		C4LZN0              	100.00%
Bootstrap support for Q5KHJ1 as seed ortholog is 100%.
Bootstrap support for C4LZN0 as seed ortholog is 100%.

Group of orthologs #131. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 E.histolytica:126

Q5KEF7              	100.00%		Q1EQ22              	100.00%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for Q1EQ22 as seed ortholog is 98%.

Group of orthologs #132. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 E.histolytica:441

Q5KMQ2              	100.00%		C4M8V1              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for C4M8V1 as seed ortholog is 100%.

Group of orthologs #133. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 E.histolytica:440

Q5K9E3              	100.00%		C4LW09              	100.00%
                    	       		B1N4Y7              	71.24%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for C4LW09 as seed ortholog is 100%.

Group of orthologs #134. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 E.histolytica:440

Q5KE92              	100.00%		C4LWX7              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for C4LWX7 as seed ortholog is 100%.

Group of orthologs #135. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 E.histolytica:440

Q5KLW7              	100.00%		O15782              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for O15782 as seed ortholog is 100%.

Group of orthologs #136. Best score 439 bits
Score difference with first non-orthologous sequence - C.neoformans:283 E.histolytica:186

Q5KC30              	100.00%		C4LYN8              	100.00%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for C4LYN8 as seed ortholog is 100%.

Group of orthologs #137. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:280 E.histolytica:433

Q5KHS3              	100.00%		C4LV24              	100.00%
                    	       		B1N346              	17.78%
Bootstrap support for Q5KHS3 as seed ortholog is 100%.
Bootstrap support for C4LV24 as seed ortholog is 100%.

Group of orthologs #138. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:332 E.histolytica:433

Q5KHQ8              	100.00%		C4M1R9              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for C4M1R9 as seed ortholog is 100%.

Group of orthologs #139. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 E.histolytica:431

Q5KFZ4              	100.00%		C4LWA8              	100.00%
Bootstrap support for Q5KFZ4 as seed ortholog is 100%.
Bootstrap support for C4LWA8 as seed ortholog is 100%.

Group of orthologs #140. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 E.histolytica:426

Q5KKB4              	100.00%		C4M3N2              	100.00%
                    	       		B1N510              	53.10%
Bootstrap support for Q5KKB4 as seed ortholog is 100%.
Bootstrap support for C4M3N2 as seed ortholog is 100%.

Group of orthologs #141. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:290 E.histolytica:423

Q5KF65              	100.00%		Q5U8M9              	100.00%
Q5KD72              	14.57%		
Q5KKR8              	11.11%		
Bootstrap support for Q5KF65 as seed ortholog is 100%.
Bootstrap support for Q5U8M9 as seed ortholog is 100%.

Group of orthologs #142. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 E.histolytica:353

Q5KDU2              	100.00%		Q1EQ39              	100.00%
                    	       		Q1EQ38              	6.82%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for Q1EQ39 as seed ortholog is 100%.

Group of orthologs #143. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:342 E.histolytica:339

Q5KI86              	100.00%		C4LZ87              	100.00%
Bootstrap support for Q5KI86 as seed ortholog is 100%.
Bootstrap support for C4LZ87 as seed ortholog is 100%.

Group of orthologs #144. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:419 E.histolytica:419

Q5KBL4              	100.00%		C4LT40              	100.00%
Bootstrap support for Q5KBL4 as seed ortholog is 100%.
Bootstrap support for C4LT40 as seed ortholog is 100%.

Group of orthologs #145. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:139 E.histolytica:419

Q5K9A8              	100.00%		C4M4T8              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 99%.
Bootstrap support for C4M4T8 as seed ortholog is 100%.

Group of orthologs #146. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 E.histolytica:415

Q5KMC0              	100.00%		C4LWT4              	100.00%
Bootstrap support for Q5KMC0 as seed ortholog is 100%.
Bootstrap support for C4LWT4 as seed ortholog is 100%.

Group of orthologs #147. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 E.histolytica:354

Q5KNC3              	100.00%		C4M4K4              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for C4M4K4 as seed ortholog is 100%.

Group of orthologs #148. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:351 E.histolytica:411

Q5KE74              	100.00%		C4LX51              	100.00%
                    	       		C4LWI5              	29.66%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for C4LX51 as seed ortholog is 100%.

Group of orthologs #149. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:149 E.histolytica:205

P0CQ76              	100.00%		C4LWF2              	100.00%
Bootstrap support for P0CQ76 as seed ortholog is 99%.
Bootstrap support for C4LWF2 as seed ortholog is 100%.

Group of orthologs #150. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:102 E.histolytica:411

Q5KB11              	100.00%		C4M5H3              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 95%.
Bootstrap support for C4M5H3 as seed ortholog is 100%.

Group of orthologs #151. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 E.histolytica:408

P0CS78              	100.00%		C4M6R5              	100.00%
Bootstrap support for P0CS78 as seed ortholog is 100%.
Bootstrap support for C4M6R5 as seed ortholog is 100%.

Group of orthologs #152. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 E.histolytica:56

Q5KNM9              	100.00%		C4MA19              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for C4MA19 as seed ortholog is 88%.

Group of orthologs #153. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 E.histolytica:404

Q5KIN6              	100.00%		C4M2Z1              	100.00%
                    	       		C4M169              	23.43%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for C4M2Z1 as seed ortholog is 100%.

Group of orthologs #154. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:277 E.histolytica:258

Q5KFJ4              	100.00%		C4LYP7              	100.00%
Bootstrap support for Q5KFJ4 as seed ortholog is 100%.
Bootstrap support for C4LYP7 as seed ortholog is 100%.

Group of orthologs #155. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:151 E.histolytica:233

P0CQ74              	100.00%		C4LZM8              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 99%.
Bootstrap support for C4LZM8 as seed ortholog is 100%.

Group of orthologs #156. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:163 E.histolytica:181

P0CR00              	100.00%		C4M5I5              	100.00%
Bootstrap support for P0CR00 as seed ortholog is 100%.
Bootstrap support for C4M5I5 as seed ortholog is 100%.

Group of orthologs #157. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:401 E.histolytica:401

Q5KAB8              	100.00%		C4M538              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for C4M538 as seed ortholog is 100%.

Group of orthologs #158. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 E.histolytica:400

Q5KGK2              	100.00%		C4M5N2              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 100%.
Bootstrap support for C4M5N2 as seed ortholog is 100%.

Group of orthologs #159. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:214 E.histolytica:394

Q5KH38              	100.00%		C4LWW8              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for C4LWW8 as seed ortholog is 100%.

Group of orthologs #160. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:288 E.histolytica:44

Q5KF69              	100.00%		C4M0F3              	100.00%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for C4M0F3 as seed ortholog is 91%.

Group of orthologs #161. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 E.histolytica:392

Q5KGH1              	100.00%		C4M071              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for C4M071 as seed ortholog is 100%.

Group of orthologs #162. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:49 E.histolytica:41

Q5KGH3              	100.00%		C4LTI9              	100.00%
Bootstrap support for Q5KGH3 as seed ortholog is 94%.
Bootstrap support for C4LTI9 as seed ortholog is 90%.

Group of orthologs #163. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 E.histolytica:389

Q5KNR6              	100.00%		C4M8Q4              	100.00%
                    	       		C4M8K7              	69.28%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for C4M8Q4 as seed ortholog is 100%.

Group of orthologs #164. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:2

Q5KP72              	100.00%		C4M6M6              	100.00%
Q5KHS2              	5.36%		C4M2N9              	82.07%
                    	       		C4LY80              	14.34%
                    	       		C4LUV2              	14.34%
Bootstrap support for Q5KP72 as seed ortholog is 97%.
Bootstrap support for C4M6M6 as seed ortholog is 52%.
Alternative seed ortholog is C4LYS6 (2 bits away from this cluster)

Group of orthologs #165. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 E.histolytica:388

Q5KJY4              	100.00%		C4LSZ7              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for C4LSZ7 as seed ortholog is 100%.

Group of orthologs #166. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:388 E.histolytica:388

P0CP26              	100.00%		C4MAW3              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for C4MAW3 as seed ortholog is 100%.

Group of orthologs #167. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 E.histolytica:386

Q5KLK8              	100.00%		C4M0L4              	100.00%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for C4M0L4 as seed ortholog is 100%.

Group of orthologs #168. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 E.histolytica:386

Q5KJI8              	100.00%		C4M653              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for C4M653 as seed ortholog is 100%.

Group of orthologs #169. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:219 E.histolytica:197

Q5KN74              	100.00%		B1N4L6              	100.00%
                    	       		C4M9J9              	100.00%
Bootstrap support for Q5KN74 as seed ortholog is 99%.
Bootstrap support for B1N4L6 as seed ortholog is 99%.
Bootstrap support for C4M9J9 as seed ortholog is 99%.

Group of orthologs #170. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:179 E.histolytica:177

Q5KEJ1              	100.00%		C4MBB2              	100.00%
                    	       		B1N2K6              	32.64%
Bootstrap support for Q5KEJ1 as seed ortholog is 99%.
Bootstrap support for C4MBB2 as seed ortholog is 99%.

Group of orthologs #171. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:317 E.histolytica:376

P0CQ14              	100.00%		C4M0K5              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for C4M0K5 as seed ortholog is 100%.

Group of orthologs #172. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:306 E.histolytica:304

Q5KQ06              	100.00%		C4LUP1              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for C4LUP1 as seed ortholog is 100%.

Group of orthologs #173. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:259 E.histolytica:246

Q5KMF5              	100.00%		B1N355              	100.00%
                    	       		Q1EQ16              	97.07%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for B1N355 as seed ortholog is 100%.

Group of orthologs #174. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 E.histolytica:373

P0CM96              	100.00%		C4LYG3              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for C4LYG3 as seed ortholog is 100%.

Group of orthologs #175. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 E.histolytica:373

P0CM38              	100.00%		C4M0D6              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for C4M0D6 as seed ortholog is 100%.

Group of orthologs #176. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:100 E.histolytica:82

Q5KLG6              	100.00%		C4M8P6              	100.00%
Bootstrap support for Q5KLG6 as seed ortholog is 94%.
Bootstrap support for C4M8P6 as seed ortholog is 86%.

Group of orthologs #177. Best score 368 bits
Score difference with first non-orthologous sequence - C.neoformans:368 E.histolytica:368

Q5K9Z4              	100.00%		C4LYF7              	100.00%
Bootstrap support for Q5K9Z4 as seed ortholog is 100%.
Bootstrap support for C4LYF7 as seed ortholog is 100%.

Group of orthologs #178. Best score 367 bits
Score difference with first non-orthologous sequence - C.neoformans:367 E.histolytica:291

Q5KKS5              	100.00%		C4LXD5              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for C4LXD5 as seed ortholog is 100%.

Group of orthologs #179. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 E.histolytica:149

Q5KM37              	100.00%		C4LWG8              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for C4LWG8 as seed ortholog is 99%.

Group of orthologs #180. Best score 363 bits
Score difference with first non-orthologous sequence - C.neoformans:363 E.histolytica:363

Q5KA00              	100.00%		C4LYN2              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for C4LYN2 as seed ortholog is 100%.

Group of orthologs #181. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 E.histolytica:361

Q5KFM3              	100.00%		C4LW95              	100.00%
Bootstrap support for Q5KFM3 as seed ortholog is 100%.
Bootstrap support for C4LW95 as seed ortholog is 100%.

Group of orthologs #182. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 E.histolytica:361

Q5KK90              	100.00%		C4M828              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for C4M828 as seed ortholog is 100%.

Group of orthologs #183. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:131 E.histolytica:119

P0CQ96              	100.00%		C4LSK1              	100.00%
                    	       		C4M9V7              	56.90%
Bootstrap support for P0CQ96 as seed ortholog is 99%.
Bootstrap support for C4LSK1 as seed ortholog is 99%.

Group of orthologs #184. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 E.histolytica:359

Q5K749              	100.00%		C4M2L7              	100.00%
Bootstrap support for Q5K749 as seed ortholog is 100%.
Bootstrap support for C4M2L7 as seed ortholog is 100%.

Group of orthologs #185. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 E.histolytica:358

Q5KAX5              	100.00%		C4MB71              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for C4MB71 as seed ortholog is 100%.

Group of orthologs #186. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 E.histolytica:223

Q5KJM5              	100.00%		C4LWU6              	100.00%
Bootstrap support for Q5KJM5 as seed ortholog is 100%.
Bootstrap support for C4LWU6 as seed ortholog is 100%.

Group of orthologs #187. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 E.histolytica:355

Q5KKA5              	100.00%		C4LZ95              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for C4LZ95 as seed ortholog is 100%.

Group of orthologs #188. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:121 E.histolytica:139

P0CQ82              	100.00%		C4M7Y5              	100.00%
Bootstrap support for P0CQ82 as seed ortholog is 99%.
Bootstrap support for C4M7Y5 as seed ortholog is 99%.

Group of orthologs #189. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 E.histolytica:353

Q5KII9              	100.00%		C4M1X8              	100.00%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for C4M1X8 as seed ortholog is 100%.

Group of orthologs #190. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:353 E.histolytica:353

Q5KKV6              	100.00%		C4M220              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for C4M220 as seed ortholog is 100%.

Group of orthologs #191. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 E.histolytica:57

Q5KB90              	100.00%		C4M7G3              	100.00%
                    	       		C4LUL3              	21.87%
                    	       		Q8WQH8              	18.92%
                    	       		C4M6N9              	8.18%
                    	       		C4M3L5              	5.62%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for C4M7G3 as seed ortholog is 92%.

Group of orthologs #192. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 E.histolytica:351

Q5KP39              	100.00%		C4M399              	100.00%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for C4M399 as seed ortholog is 100%.

Group of orthologs #193. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:128 E.histolytica:57

Q5K7L0              	100.00%		C4M8K8              	100.00%
Bootstrap support for Q5K7L0 as seed ortholog is 98%.
Bootstrap support for C4M8K8 as seed ortholog is 89%.

Group of orthologs #194. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 E.histolytica:288

Q5K7N9              	100.00%		C4LTR6              	100.00%
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for C4LTR6 as seed ortholog is 100%.

Group of orthologs #195. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 E.histolytica:104

Q5KF32              	100.00%		C4M5F3              	100.00%
Q5KKJ5              	100.00%		
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for C4M5F3 as seed ortholog is 99%.

Group of orthologs #196. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:251 E.histolytica:265

P0CS60              	100.00%		C4M6G8              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for C4M6G8 as seed ortholog is 100%.

Group of orthologs #197. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 E.histolytica:346

Q5KKP9              	100.00%		C4LTZ3              	100.00%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for C4LTZ3 as seed ortholog is 100%.

Group of orthologs #198. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:135 E.histolytica:345

P0CR06              	100.00%		C4LWM9              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 99%.
Bootstrap support for C4LWM9 as seed ortholog is 100%.

Group of orthologs #199. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:288 E.histolytica:188

Q5KG30              	100.00%		C4LXY1              	100.00%
                    	       		C4LZ76              	12.13%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for C4LXY1 as seed ortholog is 99%.

Group of orthologs #200. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:87 E.histolytica:140

P0CQ88              	100.00%		C4M058              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 98%.
Bootstrap support for C4M058 as seed ortholog is 99%.

Group of orthologs #201. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:124 E.histolytica:21

Q5KI40              	100.00%		C4LSN4              	100.00%
                    	       		C4LTQ1              	16.81%
Bootstrap support for Q5KI40 as seed ortholog is 99%.
Bootstrap support for C4LSN4 as seed ortholog is 73%.
Alternative seed ortholog is C4M4D9 (21 bits away from this cluster)

Group of orthologs #202. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:342 E.histolytica:240

P0CM88              	100.00%		C4M297              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for C4M297 as seed ortholog is 100%.

Group of orthologs #203. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 E.histolytica:165

Q5KAU7              	100.00%		C4M7U9              	100.00%
                    	       		C4LU94              	99.10%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for C4M7U9 as seed ortholog is 99%.

Group of orthologs #204. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:74 E.histolytica:129

Q5KHP3              	100.00%		Q5FZP2              	100.00%
                    	       		C4LVP2              	5.84%
Bootstrap support for Q5KHP3 as seed ortholog is 96%.
Bootstrap support for Q5FZP2 as seed ortholog is 97%.

Group of orthologs #205. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:272 E.histolytica:337

Q5K8Z3              	100.00%		C4LWZ3              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for C4LWZ3 as seed ortholog is 100%.

Group of orthologs #206. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 E.histolytica:337

P0CO10              	100.00%		C4M3A2              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for C4M3A2 as seed ortholog is 100%.

Group of orthologs #207. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 E.histolytica:334

Q5KI75              	100.00%		Q1EQ36              	100.00%
                    	       		Q1EQ35              	13.90%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for Q1EQ36 as seed ortholog is 100%.

Group of orthologs #208. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 E.histolytica:334

Q5K9L0              	100.00%		C4LZ57              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for C4LZ57 as seed ortholog is 100%.

Group of orthologs #209. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 E.histolytica:333

Q5KQ25              	100.00%		C4LYI7              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for C4LYI7 as seed ortholog is 100%.

Group of orthologs #210. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 E.histolytica:331

Q5KJ97              	100.00%		C4LVM5              	100.00%
                    	       		C4LXD0              	7.22%
Bootstrap support for Q5KJ97 as seed ortholog is 100%.
Bootstrap support for C4LVM5 as seed ortholog is 100%.

Group of orthologs #211. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 E.histolytica:331

Q5KI73              	100.00%		C4M294              	100.00%
                    	       		C4M433              	44.46%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for C4M294 as seed ortholog is 100%.

Group of orthologs #212. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:133 E.histolytica:112

P0CO88              	100.00%		C4M7W7              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 99%.
Bootstrap support for C4M7W7 as seed ortholog is 99%.

Group of orthologs #213. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 E.histolytica:329

Q5KHI3              	100.00%		C4M392              	100.00%
Bootstrap support for Q5KHI3 as seed ortholog is 100%.
Bootstrap support for C4M392 as seed ortholog is 100%.

Group of orthologs #214. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 E.histolytica:328

Q5K8Z6              	100.00%		C4M0F4              	100.00%
                    	       		C4M323              	100.00%
                    	       		C4LXB1              	39.58%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for C4M0F4 as seed ortholog is 100%.
Bootstrap support for C4M323 as seed ortholog is 100%.

Group of orthologs #215. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:122 E.histolytica:34

Q5KME1              	100.00%		C4MB24              	100.00%
Q5KMH1              	25.84%		
Bootstrap support for Q5KME1 as seed ortholog is 99%.
Bootstrap support for C4MB24 as seed ortholog is 86%.

Group of orthologs #216. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:224 E.histolytica:246

P0CS48              	100.00%		C4LSE4              	100.00%
                    	       		B1N3D9              	14.42%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for C4LSE4 as seed ortholog is 100%.

Group of orthologs #217. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:65 E.histolytica:55

Q5KAN2              	100.00%		Q26334              	100.00%
                    	       		Q8WQH7              	8.20%
Bootstrap support for Q5KAN2 as seed ortholog is 97%.
Bootstrap support for Q26334 as seed ortholog is 95%.

Group of orthologs #218. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:281 E.histolytica:324

Q5KDT3              	100.00%		C4LWW4              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for C4LWW4 as seed ortholog is 100%.

Group of orthologs #219. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 E.histolytica:324

Q5KIN5              	100.00%		C4M9H3              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for C4M9H3 as seed ortholog is 100%.

Group of orthologs #220. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 E.histolytica:323

Q5KKX9              	100.00%		C4LYM8              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 100%.
Bootstrap support for C4LYM8 as seed ortholog is 100%.

Group of orthologs #221. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 E.histolytica:322

Q5KEV3              	100.00%		C4LSJ4              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for C4LSJ4 as seed ortholog is 100%.

Group of orthologs #222. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 E.histolytica:322

Q5KPN7              	100.00%		C4M1W8              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for C4M1W8 as seed ortholog is 100%.

Group of orthologs #223. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 E.histolytica:321

P0CN28              	100.00%		C4M482              	100.00%
Bootstrap support for P0CN28 as seed ortholog is 100%.
Bootstrap support for C4M482 as seed ortholog is 100%.

Group of orthologs #224. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 E.histolytica:320

P0CQ46              	100.00%		C4M6U3              	100.00%
                    	       		C4LTM1              	20.21%
Bootstrap support for P0CQ46 as seed ortholog is 100%.
Bootstrap support for C4M6U3 as seed ortholog is 100%.

Group of orthologs #225. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:191 E.histolytica:120

Q5KDK0              	100.00%		C4LTM2              	100.00%
Bootstrap support for Q5KDK0 as seed ortholog is 99%.
Bootstrap support for C4LTM2 as seed ortholog is 99%.

Group of orthologs #226. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 E.histolytica:316

Q5K9A0              	100.00%		C4M8E9              	100.00%
Q5KEE6              	5.82%		C4M3N5              	23.21%
Bootstrap support for Q5K9A0 as seed ortholog is 100%.
Bootstrap support for C4M8E9 as seed ortholog is 100%.

Group of orthologs #227. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 E.histolytica:316

Q5KAX6              	100.00%		C4LXN0              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for C4LXN0 as seed ortholog is 100%.

Group of orthologs #228. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:66 E.histolytica:185

Q5KLR7              	100.00%		C4M2K3              	100.00%
                    	       		C4LSG9              	41.28%
                    	       		B1N5Y5              	24.59%
Bootstrap support for Q5KLR7 as seed ortholog is 94%.
Bootstrap support for C4M2K3 as seed ortholog is 100%.

Group of orthologs #229. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 E.histolytica:314

P0CQ60              	100.00%		C4M6H0              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for C4M6H0 as seed ortholog is 100%.

Group of orthologs #230. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 E.histolytica:313

Q5KAF2              	100.00%		C4LZA2              	100.00%
                    	       		C4LZU1              	100.00%
                    	       		C4LXX5              	98.87%
                    	       		B1N384              	98.69%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for C4LZA2 as seed ortholog is 100%.
Bootstrap support for C4LZU1 as seed ortholog is 100%.

Group of orthologs #231. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 E.histolytica:309

Q5KPH3              	100.00%		C4LW07              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for C4LW07 as seed ortholog is 100%.

Group of orthologs #232. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 E.histolytica:307

Q5KNK2              	100.00%		C4LYF4              	100.00%
                    	       		B1N336              	93.18%
                    	       		B1N418              	22.73%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for C4LYF4 as seed ortholog is 100%.

Group of orthologs #233. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 E.histolytica:307

Q5K8L8              	100.00%		C4LTX9              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for C4LTX9 as seed ortholog is 100%.

Group of orthologs #234. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:199 E.histolytica:254

Q5KC09              	100.00%		C4M520              	100.00%
                    	       		C4M8T2              	51.78%
                    	       		C4M4D2              	46.54%
                    	       		C4MB19              	30.37%
Bootstrap support for Q5KC09 as seed ortholog is 99%.
Bootstrap support for C4M520 as seed ortholog is 100%.

Group of orthologs #235. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:304

P0CP02              	100.00%		Q5U8N1              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 99%.
Bootstrap support for Q5U8N1 as seed ortholog is 100%.

Group of orthologs #236. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 E.histolytica:303

Q5KAS7              	100.00%		C4M2Q1              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for C4M2Q1 as seed ortholog is 100%.

Group of orthologs #237. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 E.histolytica:299

Q5KCA7              	100.00%		C4LYC7              	100.00%
Q5KG19              	10.67%		
Bootstrap support for Q5KCA7 as seed ortholog is 100%.
Bootstrap support for C4LYC7 as seed ortholog is 100%.

Group of orthologs #238. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 E.histolytica:296

Q5KML3              	100.00%		B1N3T5              	100.00%
                    	       		Q1EPY2              	99.32%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for B1N3T5 as seed ortholog is 100%.

Group of orthologs #239. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:206 E.histolytica:213

Q5KIV0              	100.00%		Q2PHE2              	100.00%
Bootstrap support for Q5KIV0 as seed ortholog is 100%.
Bootstrap support for Q2PHE2 as seed ortholog is 100%.

Group of orthologs #240. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:215 E.histolytica:292

Q5KJJ1              	100.00%		C4LZ00              	100.00%
                    	       		B1N2S4              	97.31%
Bootstrap support for Q5KJJ1 as seed ortholog is 99%.
Bootstrap support for C4LZ00 as seed ortholog is 100%.

Group of orthologs #241. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 E.histolytica:291

Q5K9K1              	100.00%		C4M791              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for C4M791 as seed ortholog is 100%.

Group of orthologs #242. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:291 E.histolytica:291

Q5KEV1              	100.00%		C4M7U0              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for C4M7U0 as seed ortholog is 100%.

Group of orthologs #243. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 E.histolytica:290

Q5KNE6              	100.00%		C4M746              	100.00%
Q5K809              	48.07%		
Bootstrap support for Q5KNE6 as seed ortholog is 100%.
Bootstrap support for C4M746 as seed ortholog is 100%.

Group of orthologs #244. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 E.histolytica:99

Q5KK51              	100.00%		C4MA64              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for C4MA64 as seed ortholog is 98%.

Group of orthologs #245. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 E.histolytica:289

Q5KL14              	100.00%		C4M856              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for C4M856 as seed ortholog is 100%.

Group of orthologs #246. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:36 E.histolytica:61

P0CM16              	100.00%		C4LXL1              	100.00%
Bootstrap support for P0CM16 as seed ortholog is 95%.
Bootstrap support for C4LXL1 as seed ortholog is 99%.

Group of orthologs #247. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 E.histolytica:287

P0CQ22              	100.00%		C4M3K5              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for C4M3K5 as seed ortholog is 100%.

Group of orthologs #248. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:176 E.histolytica:193

Q5KHS6              	100.00%		C4LXF5              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 99%.
Bootstrap support for C4LXF5 as seed ortholog is 99%.

Group of orthologs #249. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 E.histolytica:287

Q5KKT0              	100.00%		C4M7J5              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for C4M7J5 as seed ortholog is 100%.

Group of orthologs #250. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:21 E.histolytica:55

Q5K854              	100.00%		C4M5Z7              	100.00%
Q5KJY2              	8.55%		C4M8K6              	89.92%
                    	       		C4M468              	37.82%
Bootstrap support for Q5K854 as seed ortholog is 81%.
Bootstrap support for C4M5Z7 as seed ortholog is 99%.

Group of orthologs #251. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:89

Q5KAC2              	100.00%		C4LTX2              	100.00%
                    	       		C4MAY5              	19.92%
Bootstrap support for Q5KAC2 as seed ortholog is 99%.
Bootstrap support for C4LTX2 as seed ortholog is 97%.

Group of orthologs #252. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 E.histolytica:284

Q5K972              	100.00%		C4M515              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for C4M515 as seed ortholog is 100%.

Group of orthologs #253. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 E.histolytica:284

Q5KG72              	100.00%		C4M5R1              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for C4M5R1 as seed ortholog is 100%.

Group of orthologs #254. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 E.histolytica:284

Q5KDP4              	100.00%		C4M8E8              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for C4M8E8 as seed ortholog is 100%.

Group of orthologs #255. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:155 E.histolytica:283

Q5KKM6              	100.00%		C4LW71              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 99%.
Bootstrap support for C4LW71 as seed ortholog is 100%.

Group of orthologs #256. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:161 E.histolytica:148

Q5KMR8              	100.00%		C4M5D4              	100.00%
                    	       		C4M9B3              	31.30%
                    	       		C4LSZ2              	14.63%
                    	       		C4M9F2              	9.76%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for C4M5D4 as seed ortholog is 99%.

Group of orthologs #257. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:79 E.histolytica:31

Q5KKV1              	100.00%		C4M6K6              	100.00%
Q5KCA0              	5.23%		
Bootstrap support for Q5KKV1 as seed ortholog is 99%.
Bootstrap support for C4M6K6 as seed ortholog is 83%.

Group of orthologs #258. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 E.histolytica:281

Q5KD50              	100.00%		C4M137              	100.00%
                    	       		C4M943              	62.90%
Bootstrap support for Q5KD50 as seed ortholog is 100%.
Bootstrap support for C4M137 as seed ortholog is 100%.

Group of orthologs #259. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:192 E.histolytica:189

Q5KCJ8              	100.00%		C4LU92              	100.00%
                    	       		C4LTS8              	98.38%
                    	       		C4M6P6              	82.97%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for C4LU92 as seed ortholog is 100%.

Group of orthologs #260. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 E.histolytica:279

Q5K6Y3              	100.00%		C4LTW9              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for C4LTW9 as seed ortholog is 100%.

Group of orthologs #261. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 E.histolytica:279

P0CP20              	100.00%		C4LX52              	100.00%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for C4LX52 as seed ortholog is 100%.

Group of orthologs #262. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 E.histolytica:279

P0CR16              	100.00%		C4LXQ1              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 100%.
Bootstrap support for C4LXQ1 as seed ortholog is 100%.

Group of orthologs #263. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 E.histolytica:278

Q5KCK7              	100.00%		C4LUL4              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for C4LUL4 as seed ortholog is 100%.

Group of orthologs #264. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:112

Q5KJE3              	100.00%		C4M8I7              	100.00%
Bootstrap support for Q5KJE3 as seed ortholog is 99%.
Bootstrap support for C4M8I7 as seed ortholog is 98%.

Group of orthologs #265. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 E.histolytica:275

Q5KKJ1              	100.00%		C4M921              	100.00%
Q5KCW7              	5.65%		C4LXP4              	5.19%
Bootstrap support for Q5KKJ1 as seed ortholog is 100%.
Bootstrap support for C4M921 as seed ortholog is 100%.

Group of orthologs #266. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:190 E.histolytica:172

Q5KGN7              	100.00%		C4LSY9              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for C4LSY9 as seed ortholog is 100%.

Group of orthologs #267. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 E.histolytica:275

P0CS34              	100.00%		C4M3V4              	100.00%
Bootstrap support for P0CS34 as seed ortholog is 100%.
Bootstrap support for C4M3V4 as seed ortholog is 100%.

Group of orthologs #268. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 E.histolytica:275

Q5KCC8              	100.00%		C4M8C7              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for C4M8C7 as seed ortholog is 100%.

Group of orthologs #269. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 E.histolytica:187

Q5KKE9              	100.00%		Q6Y0Y5              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for Q6Y0Y5 as seed ortholog is 99%.

Group of orthologs #270. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:115

P0CP66              	100.00%		Q6SCK6              	100.00%
Q5KHE5              	45.62%		
Q5KC34              	11.67%		
P0CP68              	7.92%		
Bootstrap support for P0CP66 as seed ortholog is 99%.
Bootstrap support for Q6SCK6 as seed ortholog is 99%.

Group of orthologs #271. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 E.histolytica:272

Q5KMA6              	100.00%		B1N5V8              	100.00%
                    	       		C4LTA0              	54.97%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for B1N5V8 as seed ortholog is 100%.

Group of orthologs #272. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:91

P0CR02              	100.00%		C4M1W2              	100.00%
Bootstrap support for P0CR02 as seed ortholog is 97%.
Bootstrap support for C4M1W2 as seed ortholog is 96%.

Group of orthologs #273. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:271

Q5KBZ1              	100.00%		C4M802              	100.00%
Q5KC54              	33.11%		
Bootstrap support for Q5KBZ1 as seed ortholog is 99%.
Bootstrap support for C4M802 as seed ortholog is 100%.

Group of orthologs #274. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 E.histolytica:270

Q5KIV1              	100.00%		C4M3U5              	100.00%
                    	       		C4MA29              	99.53%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for C4M3U5 as seed ortholog is 100%.

Group of orthologs #275. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 E.histolytica:270

Q5KF37              	100.00%		C4LSY7              	100.00%
Bootstrap support for Q5KF37 as seed ortholog is 100%.
Bootstrap support for C4LSY7 as seed ortholog is 100%.

Group of orthologs #276. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 E.histolytica:270

Q5KHS1              	100.00%		C4LW47              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for C4LW47 as seed ortholog is 100%.

Group of orthologs #277. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 E.histolytica:270

Q5KKG9              	100.00%		C4M3Y9              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for C4M3Y9 as seed ortholog is 100%.

Group of orthologs #278. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 E.histolytica:125

Q5KQ34              	100.00%		C4MB38              	100.00%
Bootstrap support for Q5KQ34 as seed ortholog is 100%.
Bootstrap support for C4MB38 as seed ortholog is 99%.

Group of orthologs #279. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 E.histolytica:269

Q5KFG2              	100.00%		C4M7Z3              	100.00%
                    	       		C4LY89              	91.77%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for C4M7Z3 as seed ortholog is 100%.

Group of orthologs #280. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 E.histolytica:19

Q5KC00              	100.00%		C4LSC6              	100.00%
Bootstrap support for Q5KC00 as seed ortholog is 100%.
Bootstrap support for C4LSC6 as seed ortholog is 64%.
Alternative seed ortholog is Q9U593 (19 bits away from this cluster)

Group of orthologs #281. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 E.histolytica:269

Q5KCX9              	100.00%		C4LXF3              	100.00%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for C4LXF3 as seed ortholog is 100%.

Group of orthologs #282. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 E.histolytica:29

Q5KA97              	100.00%		C4M2N7              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for C4M2N7 as seed ortholog is 76%.

Group of orthologs #283. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 E.histolytica:165

Q5KFS1              	100.00%		C4LXY4              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 100%.
Bootstrap support for C4LXY4 as seed ortholog is 99%.

Group of orthologs #284. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:182 E.histolytica:55

Q5K9S7              	100.00%		C4LVB7              	100.00%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for C4LVB7 as seed ortholog is 94%.

Group of orthologs #285. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 E.histolytica:268

Q5KJU2              	100.00%		C4LU56              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for C4LU56 as seed ortholog is 100%.

Group of orthologs #286. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 E.histolytica:265

Q5KII0              	100.00%		C4M7V7              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for C4M7V7 as seed ortholog is 100%.

Group of orthologs #287. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 E.histolytica:264

Q5KEN3              	100.00%		C4LY93              	100.00%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for C4LY93 as seed ortholog is 100%.

Group of orthologs #288. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:54 E.histolytica:165

Q5KLZ4              	100.00%		C4LST3              	100.00%
Bootstrap support for Q5KLZ4 as seed ortholog is 91%.
Bootstrap support for C4LST3 as seed ortholog is 100%.

Group of orthologs #289. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 E.histolytica:201

Q5KDX5              	100.00%		C4M8Z1              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for C4M8Z1 as seed ortholog is 100%.

Group of orthologs #290. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 E.histolytica:129

Q5KHT1              	100.00%		Q53UB0              	100.00%
                    	       		B1N392              	52.37%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for Q53UB0 as seed ortholog is 99%.

Group of orthologs #291. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 E.histolytica:262

Q5KFQ5              	100.00%		C4LTB5              	100.00%
                    	       		C4LYJ9              	98.80%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for C4LTB5 as seed ortholog is 100%.

Group of orthologs #292. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 E.histolytica:262

Q5KJC6              	100.00%		C4LWL9              	100.00%
                    	       		C4LSR6              	71.89%
Bootstrap support for Q5KJC6 as seed ortholog is 100%.
Bootstrap support for C4LWL9 as seed ortholog is 100%.

Group of orthologs #293. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 E.histolytica:262

Q5KHZ2              	100.00%		C4M0R0              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for C4M0R0 as seed ortholog is 100%.

Group of orthologs #294. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:134

P0CQ94              	100.00%		C4M1Z3              	100.00%
Bootstrap support for P0CQ94 as seed ortholog is 94%.
Bootstrap support for C4M1Z3 as seed ortholog is 99%.

Group of orthologs #295. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 E.histolytica:172

P0CS70              	100.00%		C4M840              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for C4M840 as seed ortholog is 100%.

Group of orthologs #296. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 E.histolytica:191

Q5K796              	100.00%		C4M6G5              	100.00%
Bootstrap support for Q5K796 as seed ortholog is 100%.
Bootstrap support for C4M6G5 as seed ortholog is 100%.

Group of orthologs #297. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 E.histolytica:259

P0CM24              	100.00%		C4LY44              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for C4LY44 as seed ortholog is 100%.

Group of orthologs #298. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 E.histolytica:259

Q5KDD4              	100.00%		C4LSH9              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for C4LSH9 as seed ortholog is 100%.

Group of orthologs #299. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 E.histolytica:259

Q5KQ20              	100.00%		C4LT44              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for C4LT44 as seed ortholog is 100%.

Group of orthologs #300. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 E.histolytica:259

Q5KPK4              	100.00%		C4M7V8              	100.00%
Bootstrap support for Q5KPK4 as seed ortholog is 100%.
Bootstrap support for C4M7V8 as seed ortholog is 100%.

Group of orthologs #301. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 E.histolytica:258

Q5KLS0              	100.00%		C4M854              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for C4M854 as seed ortholog is 100%.

Group of orthologs #302. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:87

Q5KI66              	100.00%		B1N539              	100.00%
                    	       		C4M6E2              	96.69%
                    	       		B1N4I4              	94.77%
                    	       		C4MB42              	93.39%
                    	       		B1N433              	91.18%
                    	       		C4LY26              	85.67%
                    	       		C4M110              	34.99%
Bootstrap support for Q5KI66 as seed ortholog is 99%.
Bootstrap support for B1N539 as seed ortholog is 99%.

Group of orthologs #303. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 E.histolytica:255

Q5KJ92              	100.00%		C4MA71              	100.00%
Bootstrap support for Q5KJ92 as seed ortholog is 100%.
Bootstrap support for C4MA71 as seed ortholog is 100%.

Group of orthologs #304. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:203 E.histolytica:255

Q5KHR6              	100.00%		Q769I7              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for Q769I7 as seed ortholog is 100%.

Group of orthologs #305. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:185 E.histolytica:210

Q5KL60              	100.00%		C4LSF2              	100.00%
                    	       		C4M8C0              	56.09%
                    	       		C4M7S1              	33.36%
                    	       		C4M5E7              	28.18%
                    	       		C4M4W9              	17.27%
Bootstrap support for Q5KL60 as seed ortholog is 99%.
Bootstrap support for C4LSF2 as seed ortholog is 100%.

Group of orthologs #306. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 E.histolytica:253

P0CO08              	100.00%		C4LXJ5              	100.00%
Bootstrap support for P0CO08 as seed ortholog is 100%.
Bootstrap support for C4LXJ5 as seed ortholog is 100%.

Group of orthologs #307. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:176 E.histolytica:36

Q5K9V2              	100.00%		Q9BLE8              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for Q9BLE8 as seed ortholog is 92%.

Group of orthologs #308. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 E.histolytica:252

Q5KH56              	100.00%		C4MAW0              	100.00%
                    	       		B1N3M7              	95.74%
                    	       		B1N5N5              	57.46%
                    	       		B1N4H4              	55.33%
Bootstrap support for Q5KH56 as seed ortholog is 100%.
Bootstrap support for C4MAW0 as seed ortholog is 100%.

Group of orthologs #309. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 E.histolytica:142

Q5KJI7              	100.00%		B1N424              	100.00%
Bootstrap support for Q5KJI7 as seed ortholog is 100%.
Bootstrap support for B1N424 as seed ortholog is 99%.

Group of orthologs #310. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 E.histolytica:247

Q5KH66              	100.00%		C4M085              	100.00%
                    	       		B1N3M3              	26.89%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for C4M085 as seed ortholog is 100%.

Group of orthologs #311. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:80 E.histolytica:64

P0CR10              	100.00%		C4M4E5              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 84%.
Bootstrap support for C4M4E5 as seed ortholog is 99%.

Group of orthologs #312. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 E.histolytica:246

Q5KAW7              	100.00%		C4LYI6              	100.00%
Bootstrap support for Q5KAW7 as seed ortholog is 100%.
Bootstrap support for C4LYI6 as seed ortholog is 100%.

Group of orthologs #313. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 E.histolytica:245

Q5KEJ6              	100.00%		B1N2Z3              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for B1N2Z3 as seed ortholog is 100%.

Group of orthologs #314. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:126 E.histolytica:245

Q5K9B8              	100.00%		C4M0L7              	100.00%
Bootstrap support for Q5K9B8 as seed ortholog is 99%.
Bootstrap support for C4M0L7 as seed ortholog is 100%.

Group of orthologs #315. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:165 E.histolytica:244

Q5KDE0              	100.00%		C4LSH3              	100.00%
Bootstrap support for Q5KDE0 as seed ortholog is 99%.
Bootstrap support for C4LSH3 as seed ortholog is 100%.

Group of orthologs #316. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:139 E.histolytica:135

P0CR30              	100.00%		B1N4P1              	100.00%
                    	       		C4M4L8              	100.00%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for B1N4P1 as seed ortholog is 100%.
Bootstrap support for C4M4L8 as seed ortholog is 100%.

Group of orthologs #317. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 E.histolytica:243

Q5KLV9              	100.00%		C4M096              	100.00%
                    	       		B1N371              	32.09%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for C4M096 as seed ortholog is 100%.

Group of orthologs #318. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:187 E.histolytica:164

Q5KN69              	100.00%		C4M1D2              	100.00%
Bootstrap support for Q5KN69 as seed ortholog is 99%.
Bootstrap support for C4M1D2 as seed ortholog is 99%.

Group of orthologs #319. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 E.histolytica:242

Q5KGE3              	100.00%		B1N2I7              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for B1N2I7 as seed ortholog is 100%.

Group of orthologs #320. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:89

P0CQ90              	100.00%		C4MAZ1              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 95%.
Bootstrap support for C4MAZ1 as seed ortholog is 94%.

Group of orthologs #321. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 E.histolytica:114

Q5KCD2              	100.00%		C4LTC0              	100.00%
                    	       		C4LXG6              	18.67%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for C4LTC0 as seed ortholog is 99%.

Group of orthologs #322. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 E.histolytica:241

P0CQ24              	100.00%		C4LTS3              	100.00%
Bootstrap support for P0CQ24 as seed ortholog is 100%.
Bootstrap support for C4LTS3 as seed ortholog is 100%.

Group of orthologs #323. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 E.histolytica:241

Q5KCW2              	100.00%		C4M9D1              	100.00%
Bootstrap support for Q5KCW2 as seed ortholog is 100%.
Bootstrap support for C4M9D1 as seed ortholog is 100%.

Group of orthologs #324. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 E.histolytica:241

Q5KG36              	100.00%		C4M6Z7              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for C4M6Z7 as seed ortholog is 100%.

Group of orthologs #325. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 E.histolytica:239

Q5K9N8              	100.00%		C4M7G5              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for C4M7G5 as seed ortholog is 100%.

Group of orthologs #326. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 E.histolytica:238

Q5K947              	100.00%		C4LT81              	100.00%
                    	       		C4LVZ6              	93.45%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for C4LT81 as seed ortholog is 100%.

Group of orthologs #327. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 E.histolytica:237

Q5KCX8              	100.00%		C4M173              	100.00%
                    	       		C4LXX0              	60.82%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for C4M173 as seed ortholog is 100%.

Group of orthologs #328. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 E.histolytica:184

P0CP88              	100.00%		C4M2J5              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for C4M2J5 as seed ortholog is 100%.

Group of orthologs #329. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 E.histolytica:237

P0CN94              	100.00%		C4M659              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for C4M659 as seed ortholog is 100%.

Group of orthologs #330. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:237

Q5KE89              	100.00%		C4M983              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 94%.
Bootstrap support for C4M983 as seed ortholog is 100%.

Group of orthologs #331. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 E.histolytica:237

Q5KLE7              	100.00%		C4M363              	100.00%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for C4M363 as seed ortholog is 100%.

Group of orthologs #332. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 E.histolytica:237

Q5KNF4              	100.00%		C4M4V9              	100.00%
Bootstrap support for Q5KNF4 as seed ortholog is 100%.
Bootstrap support for C4M4V9 as seed ortholog is 100%.

Group of orthologs #333. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:115 E.histolytica:50

Q5KDT4              	100.00%		C4MB14              	100.00%
Q5KD75              	12.38%		
Bootstrap support for Q5KDT4 as seed ortholog is 100%.
Bootstrap support for C4MB14 as seed ortholog is 94%.

Group of orthologs #334. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 E.histolytica:235

Q5KA19              	100.00%		C4LZP2              	100.00%
                    	       		C4LZG9              	96.33%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for C4LZP2 as seed ortholog is 100%.

Group of orthologs #335. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 E.histolytica:235

Q5K772              	100.00%		C4LV41              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for C4LV41 as seed ortholog is 100%.

Group of orthologs #336. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 E.histolytica:235

Q5KFD9              	100.00%		C4LTI2              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for C4LTI2 as seed ortholog is 100%.

Group of orthologs #337. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 E.histolytica:235

Q5KPZ1              	100.00%		C4LT02              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for C4LT02 as seed ortholog is 100%.

Group of orthologs #338. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 E.histolytica:234

P0CQ58              	100.00%		C4LTQ5              	100.00%
                    	       		C4M609              	98.53%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for C4LTQ5 as seed ortholog is 100%.

Group of orthologs #339. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 E.histolytica:234

Q5KH27              	100.00%		C4M6A7              	100.00%
                    	       		C4MA11              	12.26%
Bootstrap support for Q5KH27 as seed ortholog is 100%.
Bootstrap support for C4M6A7 as seed ortholog is 100%.

Group of orthologs #340. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 E.histolytica:234

Q5KPS9              	100.00%		C4M8P4              	100.00%
Bootstrap support for Q5KPS9 as seed ortholog is 100%.
Bootstrap support for C4M8P4 as seed ortholog is 100%.

Group of orthologs #341. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:233

Q5KK79              	100.00%		C4LYD9              	100.00%
Bootstrap support for Q5KK79 as seed ortholog is 98%.
Bootstrap support for C4LYD9 as seed ortholog is 100%.

Group of orthologs #342. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 E.histolytica:232

Q5K8T6              	100.00%		C4LZS1              	100.00%
                    	       		Q56AY2              	68.59%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for C4LZS1 as seed ortholog is 100%.

Group of orthologs #343. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 E.histolytica:232

Q5K8X8              	100.00%		C4M295              	100.00%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for C4M295 as seed ortholog is 100%.

Group of orthologs #344. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 E.histolytica:232

Q5KEZ6              	100.00%		C4LWZ7              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for C4LWZ7 as seed ortholog is 100%.

Group of orthologs #345. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 E.histolytica:232

Q5KC89              	100.00%		C4M632              	100.00%
Bootstrap support for Q5KC89 as seed ortholog is 100%.
Bootstrap support for C4M632 as seed ortholog is 100%.

Group of orthologs #346. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:61

Q5K8I9              	100.00%		Q9BLF3              	100.00%
Bootstrap support for Q5K8I9 as seed ortholog is 99%.
Bootstrap support for Q9BLF3 as seed ortholog is 98%.

Group of orthologs #347. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:95 E.histolytica:231

Q5K7Y1              	100.00%		C4LW32              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 96%.
Bootstrap support for C4LW32 as seed ortholog is 100%.

Group of orthologs #348. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:41 E.histolytica:230

Q5K9D1              	100.00%		C4M7W2              	100.00%
                    	       		C4M8C2              	100.00%
                    	       		B1N503              	38.04%
                    	       		B1N5J0              	23.43%
                    	       		C4LUT1              	5.04%
Bootstrap support for Q5K9D1 as seed ortholog is 84%.
Bootstrap support for C4M7W2 as seed ortholog is 100%.
Bootstrap support for C4M8C2 as seed ortholog is 100%.

Group of orthologs #349. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:29 E.histolytica:230

Q5KMG1              	100.00%		C4M9Z7              	100.00%
Q5K8R8              	32.82%		B1N3U1              	16.25%
                    	       		B1N4V2              	13.15%
Bootstrap support for Q5KMG1 as seed ortholog is 73%.
Alternative seed ortholog is P0CL92 (29 bits away from this cluster)
Bootstrap support for C4M9Z7 as seed ortholog is 100%.

Group of orthologs #350. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:107 E.histolytica:83

Q5K7V8              	100.00%		C4LV99              	100.00%
                    	       		C4LVR7              	41.22%
Bootstrap support for Q5K7V8 as seed ortholog is 62%.
Alternative seed ortholog is Q5KKS0 (107 bits away from this cluster)
Bootstrap support for C4LV99 as seed ortholog is 95%.

Group of orthologs #351. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:168 E.histolytica:230

Q5KMI8              	100.00%		C4LUM1              	100.00%
                    	       		C4M4X8              	8.98%
Bootstrap support for Q5KMI8 as seed ortholog is 100%.
Bootstrap support for C4LUM1 as seed ortholog is 100%.

Group of orthologs #352. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 E.histolytica:227

Q5KFJ6              	100.00%		C4MA87              	100.00%
                    	       		C4M036              	94.20%
Bootstrap support for Q5KFJ6 as seed ortholog is 100%.
Bootstrap support for C4MA87 as seed ortholog is 100%.

Group of orthologs #353. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 E.histolytica:227

Q5K9Y3              	100.00%		C4LTW4              	100.00%
Bootstrap support for Q5K9Y3 as seed ortholog is 100%.
Bootstrap support for C4LTW4 as seed ortholog is 100%.

Group of orthologs #354. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 E.histolytica:112

Q5K7X0              	100.00%		Q1EQ46              	100.00%
Bootstrap support for Q5K7X0 as seed ortholog is 100%.
Bootstrap support for Q1EQ46 as seed ortholog is 79%.

Group of orthologs #355. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 E.histolytica:226

Q5KIJ1              	100.00%		C4LXN2              	100.00%
                    	       		C4LZB0              	98.67%
                    	       		B1N442              	97.67%
                    	       		B1N350              	76.33%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for C4LXN2 as seed ortholog is 100%.

Group of orthologs #356. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 E.histolytica:158

P0CN96              	100.00%		C4M483              	100.00%
Q5KPS8              	11.96%		
Q5KG89              	8.13%		
Bootstrap support for P0CN96 as seed ortholog is 100%.
Bootstrap support for C4M483 as seed ortholog is 100%.

Group of orthologs #357. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:14 E.histolytica:24

Q5KB17              	100.00%		C4LZF9              	100.00%
                    	       		B1N3W3              	61.13%
Bootstrap support for Q5KB17 as seed ortholog is 66%.
Alternative seed ortholog is Q5KCH7 (14 bits away from this cluster)
Bootstrap support for C4LZF9 as seed ortholog is 77%.

Group of orthologs #358. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:53

Q5KK41              	100.00%		Q963D1              	100.00%
Bootstrap support for Q5KK41 as seed ortholog is 99%.
Bootstrap support for Q963D1 as seed ortholog is 97%.

Group of orthologs #359. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 E.histolytica:224

P0CQ56              	100.00%		C4M5A0              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for C4M5A0 as seed ortholog is 100%.

Group of orthologs #360. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:65

Q5KAZ9              	100.00%		C4M831              	100.00%
Bootstrap support for Q5KAZ9 as seed ortholog is 76%.
Bootstrap support for C4M831 as seed ortholog is 95%.

Group of orthologs #361. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:223

P0CQ02              	100.00%		C4M878              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 99%.
Bootstrap support for C4M878 as seed ortholog is 100%.

Group of orthologs #362. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 E.histolytica:223

Q5KL66              	100.00%		C4M6Y9              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for C4M6Y9 as seed ortholog is 100%.

Group of orthologs #363. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 E.histolytica:222

Q5KJD4              	100.00%		C4M7U2              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for C4M7U2 as seed ortholog is 100%.

Group of orthologs #364. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:49 E.histolytica:94

Q5K913              	100.00%		C4LV33              	100.00%
                    	       		C4LUK8              	14.23%
Bootstrap support for Q5K913 as seed ortholog is 91%.
Bootstrap support for C4LV33 as seed ortholog is 99%.

Group of orthologs #365. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:131

Q5KCN2              	100.00%		C4M1V0              	100.00%
Bootstrap support for Q5KCN2 as seed ortholog is 100%.
Bootstrap support for C4M1V0 as seed ortholog is 100%.

Group of orthologs #366. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 E.histolytica:219

Q5KLE9              	100.00%		C4M6M5              	100.00%
Bootstrap support for Q5KLE9 as seed ortholog is 100%.
Bootstrap support for C4M6M5 as seed ortholog is 100%.

Group of orthologs #367. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 E.histolytica:219

Q5KLJ0              	100.00%		C4M6T8              	100.00%
Bootstrap support for Q5KLJ0 as seed ortholog is 100%.
Bootstrap support for C4M6T8 as seed ortholog is 100%.

Group of orthologs #368. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 E.histolytica:218

Q5KI91              	100.00%		C4M090              	100.00%
Bootstrap support for Q5KI91 as seed ortholog is 100%.
Bootstrap support for C4M090 as seed ortholog is 100%.

Group of orthologs #369. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:74

Q5KF72              	100.00%		C4M5T2              	100.00%
Bootstrap support for Q5KF72 as seed ortholog is 99%.
Bootstrap support for C4M5T2 as seed ortholog is 99%.

Group of orthologs #370. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 E.histolytica:218

Q5KK29              	100.00%		C4M7H0              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for C4M7H0 as seed ortholog is 100%.

Group of orthologs #371. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 E.histolytica:217

Q5KH10              	100.00%		C4LVJ7              	100.00%
                    	       		C4M0S8              	20.46%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for C4LVJ7 as seed ortholog is 100%.

Group of orthologs #372. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 E.histolytica:217

Q5KD80              	100.00%		C4MAW8              	100.00%
                    	       		C4M4A2              	98.95%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for C4MAW8 as seed ortholog is 100%.

Group of orthologs #373. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 E.histolytica:217

Q5KCD9              	100.00%		Q60I38              	100.00%
                    	       		B1N376              	51.81%
Bootstrap support for Q5KCD9 as seed ortholog is 100%.
Bootstrap support for Q60I38 as seed ortholog is 100%.

Group of orthologs #374. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 E.histolytica:217

Q5KQ43              	100.00%		C4M648              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for C4M648 as seed ortholog is 100%.

Group of orthologs #375. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 E.histolytica:216

Q5KJ50              	100.00%		C4M5L3              	100.00%
                    	       		B1N4A4              	71.91%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for C4M5L3 as seed ortholog is 100%.

Group of orthologs #376. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 E.histolytica:29

Q5K745              	100.00%		C4M4E3              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for C4M4E3 as seed ortholog is 69%.
Alternative seed ortholog is C4LWL8 (29 bits away from this cluster)

Group of orthologs #377. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:123 E.histolytica:215

Q5K9M8              	100.00%		B1N2N4              	100.00%
                    	       		C4LVZ3              	100.00%
                    	       		B1N610              	47.64%
                    	       		C4LUI9              	10.89%
Bootstrap support for Q5K9M8 as seed ortholog is 99%.
Bootstrap support for B1N2N4 as seed ortholog is 100%.
Bootstrap support for C4LVZ3 as seed ortholog is 100%.

Group of orthologs #378. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 E.histolytica:215

Q5KLE6              	100.00%		B1N5A1              	100.00%
                    	       		C4M4L2              	100.00%
Bootstrap support for Q5KLE6 as seed ortholog is 100%.
Bootstrap support for B1N5A1 as seed ortholog is 100%.
Bootstrap support for C4M4L2 as seed ortholog is 100%.

Group of orthologs #379. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 E.histolytica:215

Q5KJJ3              	100.00%		C4LZP4              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for C4LZP4 as seed ortholog is 100%.

Group of orthologs #380. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 E.histolytica:214

Q5KKZ9              	100.00%		C4LSP9              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for C4LSP9 as seed ortholog is 100%.

Group of orthologs #381. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:9 E.histolytica:6

P0CP82              	100.00%		O15729              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 64%.
Alternative seed ortholog is Q5KMM0 (9 bits away from this cluster)
Bootstrap support for O15729 as seed ortholog is 56%.
Alternative seed ortholog is C4M7U6 (6 bits away from this cluster)

Group of orthologs #382. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:18 E.histolytica:65

P0CP78              	100.00%		C4M525              	100.00%
                    	       		C4M942              	15.73%
Bootstrap support for P0CP78 as seed ortholog is 73%.
Alternative seed ortholog is Q5KMM0 (18 bits away from this cluster)
Bootstrap support for C4M525 as seed ortholog is 99%.

Group of orthologs #383. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:43 E.histolytica:213

Q5KFC1              	100.00%		C4M7Y1              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 78%.
Bootstrap support for C4M7Y1 as seed ortholog is 100%.

Group of orthologs #384. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 E.histolytica:81

Q5KGN0              	100.00%		C4M9B6              	100.00%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for C4M9B6 as seed ortholog is 93%.

Group of orthologs #385. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 E.histolytica:155

Q5KCE8              	100.00%		C4LYB5              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 100%.
Bootstrap support for C4LYB5 as seed ortholog is 100%.

Group of orthologs #386. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 E.histolytica:212

Q5KMT6              	100.00%		C4M1V9              	100.00%
Bootstrap support for Q5KMT6 as seed ortholog is 100%.
Bootstrap support for C4M1V9 as seed ortholog is 100%.

Group of orthologs #387. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 E.histolytica:13

Q5KCI0              	100.00%		A7UFC2              	100.00%
Bootstrap support for Q5KCI0 as seed ortholog is 100%.
Bootstrap support for A7UFC2 as seed ortholog is 70%.
Alternative seed ortholog is C4M7H7 (13 bits away from this cluster)

Group of orthologs #388. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 E.histolytica:210

Q5KHB5              	100.00%		C4M296              	100.00%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for C4M296 as seed ortholog is 100%.

Group of orthologs #389. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 E.histolytica:107

Q5KF83              	100.00%		C4LUJ2              	100.00%
Bootstrap support for Q5KF83 as seed ortholog is 100%.
Bootstrap support for C4LUJ2 as seed ortholog is 97%.

Group of orthologs #390. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 E.histolytica:209

Q5KML5              	100.00%		C4M5U0              	100.00%
Bootstrap support for Q5KML5 as seed ortholog is 100%.
Bootstrap support for C4M5U0 as seed ortholog is 100%.

Group of orthologs #391. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 E.histolytica:208

Q5KH08              	100.00%		C4LZN4              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for C4LZN4 as seed ortholog is 100%.

Group of orthologs #392. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:117 E.histolytica:207

Q5KGD8              	100.00%		C4M300              	100.00%
                    	       		C4LTR1              	14.29%
                    	       		C4M380              	12.77%
Bootstrap support for Q5KGD8 as seed ortholog is 99%.
Bootstrap support for C4M300 as seed ortholog is 100%.

Group of orthologs #393. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 E.histolytica:207

Q5KFT0              	100.00%		B1N2I3              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for B1N2I3 as seed ortholog is 100%.

Group of orthologs #394. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 E.histolytica:207

Q5KKC2              	100.00%		C4LSX4              	100.00%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for C4LSX4 as seed ortholog is 100%.

Group of orthologs #395. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 E.histolytica:206

Q5KCS1              	100.00%		B1N3R9              	100.00%
                    	       		C4LVH6              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for B1N3R9 as seed ortholog is 100%.
Bootstrap support for C4LVH6 as seed ortholog is 100%.

Group of orthologs #396. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 E.histolytica:64

Q5KP89              	100.00%		C4MBL4              	100.00%
                    	       		C4MAR2              	17.73%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for C4MBL4 as seed ortholog is 90%.

Group of orthologs #397. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 E.histolytica:205

Q5KBD0              	100.00%		C4LWI8              	100.00%
                    	       		C4M5N4              	13.07%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for C4LWI8 as seed ortholog is 100%.

Group of orthologs #398. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 E.histolytica:106

Q5KI89              	100.00%		C4M592              	100.00%
                    	       		C4LTJ8              	21.18%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for C4M592 as seed ortholog is 99%.

Group of orthologs #399. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 E.histolytica:41

P0CN04              	100.00%		C4LVD3              	100.00%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for C4LVD3 as seed ortholog is 81%.

Group of orthologs #400. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 E.histolytica:205

Q5KH85              	100.00%		C4M1X4              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for C4M1X4 as seed ortholog is 100%.

Group of orthologs #401. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 E.histolytica:205

Q5KHF9              	100.00%		C4M982              	100.00%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for C4M982 as seed ortholog is 100%.

Group of orthologs #402. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:68

Q5KGZ4              	100.00%		Q6AW60              	100.00%
                    	       		Q9BLE4              	30.95%
                    	       		C4M2S0              	21.43%
                    	       		Q5NT42              	19.52%
Bootstrap support for Q5KGZ4 as seed ortholog is 97%.
Bootstrap support for Q6AW60 as seed ortholog is 99%.

Group of orthologs #403. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:60 E.histolytica:203

Q5K840              	100.00%		C4M4G8              	100.00%
Q5K833              	78.09%		
Bootstrap support for Q5K840 as seed ortholog is 90%.
Bootstrap support for C4M4G8 as seed ortholog is 100%.

Group of orthologs #404. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 E.histolytica:39

Q5KK04              	100.00%		C4LWU8              	100.00%
Q5KL75              	9.07%		
Bootstrap support for Q5KK04 as seed ortholog is 100%.
Bootstrap support for C4LWU8 as seed ortholog is 93%.

Group of orthologs #405. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 E.histolytica:203

Q5KIH5              	100.00%		C4M049              	100.00%
                    	       		C4MBI8              	14.73%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for C4M049 as seed ortholog is 100%.

Group of orthologs #406. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 E.histolytica:203

Q5KCD4              	100.00%		C4M5V5              	100.00%
Bootstrap support for Q5KCD4 as seed ortholog is 100%.
Bootstrap support for C4M5V5 as seed ortholog is 100%.

Group of orthologs #407. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 E.histolytica:203

Q5KHY1              	100.00%		C4M998              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for C4M998 as seed ortholog is 100%.

Group of orthologs #408. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:116 E.histolytica:96

Q5KKX6              	100.00%		C4LV74              	100.00%
                    	       		C4M7R2              	6.09%
Bootstrap support for Q5KKX6 as seed ortholog is 99%.
Bootstrap support for C4LV74 as seed ortholog is 98%.

Group of orthologs #409. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 E.histolytica:201

Q5KI33              	100.00%		C4LVG9              	100.00%
                    	       		C4MB25              	66.19%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for C4LVG9 as seed ortholog is 100%.

Group of orthologs #410. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 E.histolytica:201

Q5K760              	100.00%		C4LSI5              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for C4LSI5 as seed ortholog is 100%.

Group of orthologs #411. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 E.histolytica:201

P0CO46              	100.00%		C4M003              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for C4M003 as seed ortholog is 100%.

Group of orthologs #412. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 E.histolytica:201

Q5KLL4              	100.00%		C4LSB1              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for C4LSB1 as seed ortholog is 100%.

Group of orthologs #413. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 E.histolytica:201

Q5K7K5              	100.00%		C4M981              	100.00%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for C4M981 as seed ortholog is 100%.

Group of orthologs #414. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 E.histolytica:200

Q5K8A1              	100.00%		Q1EPY3              	100.00%
Bootstrap support for Q5K8A1 as seed ortholog is 100%.
Bootstrap support for Q1EPY3 as seed ortholog is 100%.

Group of orthologs #415. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 E.histolytica:200

Q5KEY0              	100.00%		C4M7Y3              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for C4M7Y3 as seed ortholog is 100%.

Group of orthologs #416. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 E.histolytica:199

Q5KFV6              	100.00%		Q1EPX9              	100.00%
                    	       		B1N319              	12.56%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for Q1EPX9 as seed ortholog is 100%.

Group of orthologs #417. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 E.histolytica:199

Q5KC51              	100.00%		C4M0A4              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for C4M0A4 as seed ortholog is 100%.

Group of orthologs #418. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:123 E.histolytica:141

Q5KHR9              	100.00%		C4M2F9              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 99%.
Bootstrap support for C4M2F9 as seed ortholog is 99%.

Group of orthologs #419. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 E.histolytica:199

Q5KPD2              	100.00%		C4M4T9              	100.00%
Bootstrap support for Q5KPD2 as seed ortholog is 100%.
Bootstrap support for C4M4T9 as seed ortholog is 100%.

Group of orthologs #420. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:70 E.histolytica:198

Q5KP42              	100.00%		C4M254              	100.00%
                    	       		C4M507              	41.80%
                    	       		C4MB75              	18.50%
Bootstrap support for Q5KP42 as seed ortholog is 80%.
Bootstrap support for C4M254 as seed ortholog is 100%.

Group of orthologs #421. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:82

Q5KJV3              	100.00%		C4M3E9              	100.00%
                    	       		B1N3H6              	35.28%
Bootstrap support for Q5KJV3 as seed ortholog is 60%.
Alternative seed ortholog is Q5KP84 (25 bits away from this cluster)
Bootstrap support for C4M3E9 as seed ortholog is 93%.

Group of orthologs #422. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 E.histolytica:198

P0CP58              	100.00%		C4M0Q1              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for C4M0Q1 as seed ortholog is 100%.

Group of orthologs #423. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 E.histolytica:198

Q5KHA6              	100.00%		C4LVX7              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for C4LVX7 as seed ortholog is 100%.

Group of orthologs #424. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 E.histolytica:101

Q5KCX4              	100.00%		C4M643              	100.00%
                    	       		C4LXK6              	62.78%
Bootstrap support for Q5KCX4 as seed ortholog is 100%.
Bootstrap support for C4M643 as seed ortholog is 99%.

Group of orthologs #425. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 E.histolytica:197

Q5K8P0              	100.00%		C4LUN7              	100.00%
Bootstrap support for Q5K8P0 as seed ortholog is 100%.
Bootstrap support for C4LUN7 as seed ortholog is 100%.

Group of orthologs #426. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:100 E.histolytica:58

Q5KEU0              	100.00%		C4M2Y3              	100.00%
Bootstrap support for Q5KEU0 as seed ortholog is 99%.
Bootstrap support for C4M2Y3 as seed ortholog is 99%.

Group of orthologs #427. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 E.histolytica:197

Q5KD79              	100.00%		C4M773              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for C4M773 as seed ortholog is 100%.

Group of orthologs #428. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:27 E.histolytica:8

P0CQ42              	100.00%		B1N354              	100.00%
Bootstrap support for P0CQ42 as seed ortholog is 64%.
Alternative seed ortholog is Q5KAF3 (27 bits away from this cluster)
Bootstrap support for B1N354 as seed ortholog is 66%.
Alternative seed ortholog is Q24806 (8 bits away from this cluster)

Group of orthologs #429. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 E.histolytica:90

Q5KBT6              	100.00%		C4M4D8              	100.00%
Bootstrap support for Q5KBT6 as seed ortholog is 100%.
Bootstrap support for C4M4D8 as seed ortholog is 99%.

Group of orthologs #430. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 E.histolytica:196

Q5KLF5              	100.00%		C4LW22              	100.00%
Bootstrap support for Q5KLF5 as seed ortholog is 100%.
Bootstrap support for C4LW22 as seed ortholog is 100%.

Group of orthologs #431. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:196

Q5KN41              	100.00%		C4LUU1              	100.00%
Bootstrap support for Q5KN41 as seed ortholog is 99%.
Bootstrap support for C4LUU1 as seed ortholog is 100%.

Group of orthologs #432. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 E.histolytica:196

Q5KDD6              	100.00%		C4M5B7              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for C4M5B7 as seed ortholog is 100%.

Group of orthologs #433. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 E.histolytica:195

Q5KIL9              	100.00%		C4M4B7              	100.00%
                    	       		C4LZR6              	33.43%
Bootstrap support for Q5KIL9 as seed ortholog is 100%.
Bootstrap support for C4M4B7 as seed ortholog is 100%.

Group of orthologs #434. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 E.histolytica:195

P0CR56              	100.00%		C4M771              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for C4M771 as seed ortholog is 100%.

Group of orthologs #435. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 E.histolytica:132

Q5KH50              	100.00%		C4M7X7              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for C4M7X7 as seed ortholog is 99%.

Group of orthologs #436. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 E.histolytica:194

Q5KIS9              	100.00%		C4LZL4              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for C4LZL4 as seed ortholog is 100%.

Group of orthologs #437. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 E.histolytica:194

Q5KGF9              	100.00%		C4M6Z5              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for C4M6Z5 as seed ortholog is 100%.

Group of orthologs #438. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 E.histolytica:194

Q5KNF9              	100.00%		C4M0G3              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for C4M0G3 as seed ortholog is 100%.

Group of orthologs #439. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 E.histolytica:193

Q5KCL1              	100.00%		Q27648              	100.00%
Q5KM78              	10.73%		Q27647              	86.05%
Bootstrap support for Q5KCL1 as seed ortholog is 100%.
Bootstrap support for Q27648 as seed ortholog is 100%.

Group of orthologs #440. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 E.histolytica:193

Q5KIM1              	100.00%		C4M7N6              	100.00%
                    	       		C4MBQ0              	7.80%
                    	       		B1N3N3              	5.93%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for C4M7N6 as seed ortholog is 100%.

Group of orthologs #441. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 E.histolytica:193

Q5KIJ0              	100.00%		C4LXX7              	100.00%
                    	       		C4M9M7              	94.34%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for C4LXX7 as seed ortholog is 100%.

Group of orthologs #442. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 E.histolytica:192

Q5K8Q5              	100.00%		C4M7K4              	100.00%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for C4M7K4 as seed ortholog is 100%.

Group of orthologs #443. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 E.histolytica:191

Q5KDK1              	100.00%		C4M4H7              	100.00%
                    	       		C4M555              	30.50%
                    	       		C4MAF8              	11.36%
                    	       		C4M699              	9.12%
                    	       		C4LTU5              	7.08%
                    	       		C4M7G7              	6.31%
Bootstrap support for Q5KDK1 as seed ortholog is 100%.
Bootstrap support for C4M4H7 as seed ortholog is 100%.

Group of orthologs #444. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 E.histolytica:191

Q5KA46              	100.00%		C4LZ42              	100.00%
                    	       		C4M367              	81.89%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for C4LZ42 as seed ortholog is 100%.

Group of orthologs #445. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:191

Q5KL88              	100.00%		C4LU84              	100.00%
                    	       		C4M6Z2              	10.68%
Bootstrap support for Q5KL88 as seed ortholog is 94%.
Bootstrap support for C4LU84 as seed ortholog is 100%.

Group of orthologs #446. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:6 E.histolytica:24

Q5KAW6              	100.00%		C4M986              	100.00%
Q5KG21              	7.87%		
Bootstrap support for Q5KAW6 as seed ortholog is 76%.
Bootstrap support for C4M986 as seed ortholog is 61%.
Alternative seed ortholog is C4LSG3 (24 bits away from this cluster)

Group of orthologs #447. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 E.histolytica:190

Q5KNH2              	100.00%		C4M979              	100.00%
                    	       		C4LW92              	95.59%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for C4M979 as seed ortholog is 100%.

Group of orthologs #448. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 E.histolytica:190

Q5KBP2              	100.00%		C4M572              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for C4M572 as seed ortholog is 100%.

Group of orthologs #449. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:147 E.histolytica:190

Q5KHU8              	100.00%		C4M9T1              	100.00%
Bootstrap support for Q5KHU8 as seed ortholog is 99%.
Bootstrap support for C4M9T1 as seed ortholog is 100%.

Group of orthologs #450. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 E.histolytica:189

Q5KBW9              	100.00%		C4LU86              	100.00%
                    	       		C4LWJ4              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for C4LU86 as seed ortholog is 100%.
Bootstrap support for C4LWJ4 as seed ortholog is 100%.

Group of orthologs #451. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 E.histolytica:114

Q5K938              	100.00%		C4M343              	100.00%
Q5KPI4              	5.91%		
Bootstrap support for Q5K938 as seed ortholog is 100%.
Bootstrap support for C4M343 as seed ortholog is 100%.

Group of orthologs #452. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:74 E.histolytica:29

P0CS16              	100.00%		C4M911              	100.00%
Bootstrap support for P0CS16 as seed ortholog is 99%.
Bootstrap support for C4M911 as seed ortholog is 86%.

Group of orthologs #453. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:90 E.histolytica:35

Q5KGN1              	100.00%		C4LZI4              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 99%.
Bootstrap support for C4LZI4 as seed ortholog is 92%.

Group of orthologs #454. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 E.histolytica:187

Q5KBS2              	100.00%		C4LTD9              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for C4LTD9 as seed ortholog is 100%.

Group of orthologs #455. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 E.histolytica:187

Q5KJC9              	100.00%		C4M1E1              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for C4M1E1 as seed ortholog is 100%.

Group of orthologs #456. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 E.histolytica:185

Q5K6V3              	100.00%		C4M844              	100.00%
                    	       		B1N4H2              	48.23%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for C4M844 as seed ortholog is 100%.

Group of orthologs #457. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 E.histolytica:103

Q5K8T0              	100.00%		C4LTN4              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for C4LTN4 as seed ortholog is 99%.

Group of orthologs #458. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 E.histolytica:185

Q5KPW7              	100.00%		B1N3N6              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for B1N3N6 as seed ortholog is 100%.

Group of orthologs #459. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:85

Q5KBK7              	100.00%		C4M6M3              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for C4M6M3 as seed ortholog is 99%.

Group of orthologs #460. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 E.histolytica:185

Q5KFR0              	100.00%		C4M930              	100.00%
Bootstrap support for Q5KFR0 as seed ortholog is 100%.
Bootstrap support for C4M930 as seed ortholog is 100%.

Group of orthologs #461. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 E.histolytica:184

Q5KQ70              	100.00%		C4M9B0              	100.00%
                    	       		C4LVZ9              	98.10%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for C4M9B0 as seed ortholog is 100%.

Group of orthologs #462. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 E.histolytica:184

Q5KBR5              	100.00%		C4LV67              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for C4LV67 as seed ortholog is 100%.

Group of orthologs #463. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 E.histolytica:183

Q5KDJ7              	100.00%		C4M8Y8              	100.00%
                    	       		C4M0Q2              	99.65%
                    	       		C4MAX2              	60.76%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for C4M8Y8 as seed ortholog is 100%.

Group of orthologs #464. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 E.histolytica:183

Q5K9U5              	100.00%		C4LUM5              	100.00%
Bootstrap support for Q5K9U5 as seed ortholog is 100%.
Bootstrap support for C4LUM5 as seed ortholog is 100%.

Group of orthologs #465. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 E.histolytica:183

Q5K7J7              	100.00%		C4M1I1              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 100%.
Bootstrap support for C4M1I1 as seed ortholog is 100%.

Group of orthologs #466. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 E.histolytica:183

Q5KEZ5              	100.00%		C4LUZ2              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for C4LUZ2 as seed ortholog is 100%.

Group of orthologs #467. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 E.histolytica:183

Q5KJ55              	100.00%		C4M2B8              	100.00%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for C4M2B8 as seed ortholog is 100%.

Group of orthologs #468. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 E.histolytica:182

Q5K8L4              	100.00%		C4LZV8              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for C4LZV8 as seed ortholog is 100%.

Group of orthologs #469. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 E.histolytica:182

Q5KIN9              	100.00%		C4LYX8              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for C4LYX8 as seed ortholog is 100%.

Group of orthologs #470. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 E.histolytica:182

Q5KBP8              	100.00%		C4M8Q0              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for C4M8Q0 as seed ortholog is 100%.

Group of orthologs #471. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:112 E.histolytica:181

Q5K959              	100.00%		C4LVB0              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 100%.
Bootstrap support for C4LVB0 as seed ortholog is 100%.

Group of orthologs #472. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 E.histolytica:181

Q5KC19              	100.00%		C4LZ28              	100.00%
Bootstrap support for Q5KC19 as seed ortholog is 100%.
Bootstrap support for C4LZ28 as seed ortholog is 100%.

Group of orthologs #473. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 E.histolytica:181

Q5KBN7              	100.00%		C4M5M9              	100.00%
Bootstrap support for Q5KBN7 as seed ortholog is 100%.
Bootstrap support for C4M5M9 as seed ortholog is 100%.

Group of orthologs #474. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 E.histolytica:180

Q5KEK6              	100.00%		C4M964              	100.00%
                    	       		C4M5D7              	52.59%
                    	       		C4LYU3              	25.13%
Bootstrap support for Q5KEK6 as seed ortholog is 100%.
Bootstrap support for C4M964 as seed ortholog is 100%.

Group of orthologs #475. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 E.histolytica:180

Q5K8D6              	100.00%		C4M8A4              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for C4M8A4 as seed ortholog is 100%.

Group of orthologs #476. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 E.histolytica:179

Q5K844              	100.00%		C4LUV6              	100.00%
                    	       		C4LTU4              	30.97%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for C4LUV6 as seed ortholog is 100%.

Group of orthologs #477. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 E.histolytica:179

Q5KN42              	100.00%		C4M5I8              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for C4M5I8 as seed ortholog is 100%.

Group of orthologs #478. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 E.histolytica:51

Q5KHT0              	100.00%		C4LVN8              	100.00%
                    	       		C4LSM2              	90.28%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for C4LVN8 as seed ortholog is 99%.

Group of orthologs #479. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 E.histolytica:178

Q5KGW0              	100.00%		O15612              	100.00%
                    	       		C4LUW3              	96.86%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for O15612 as seed ortholog is 100%.

Group of orthologs #480. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 E.histolytica:178

Q5KAE4              	100.00%		C4LT83              	100.00%
Bootstrap support for Q5KAE4 as seed ortholog is 100%.
Bootstrap support for C4LT83 as seed ortholog is 100%.

Group of orthologs #481. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:178

Q5KFL1              	100.00%		C4M0I4              	100.00%
Bootstrap support for Q5KFL1 as seed ortholog is 93%.
Bootstrap support for C4M0I4 as seed ortholog is 100%.

Group of orthologs #482. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 E.histolytica:178

Q5KII4              	100.00%		C4M5L0              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for C4M5L0 as seed ortholog is 100%.

Group of orthologs #483. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 E.histolytica:178

Q5KPS5              	100.00%		Q9BI08              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for Q9BI08 as seed ortholog is 100%.

Group of orthologs #484. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 E.histolytica:112

Q5KNI6              	100.00%		C4LYV2              	100.00%
                    	       		C4MA09              	100.00%
                    	       		C4M938              	96.77%
                    	       		C4M751              	94.62%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for C4LYV2 as seed ortholog is 100%.
Bootstrap support for C4MA09 as seed ortholog is 99%.

Group of orthologs #485. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 E.histolytica:176

Q5KCP8              	100.00%		C4LT01              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for C4LT01 as seed ortholog is 100%.

Group of orthologs #486. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 E.histolytica:7

Q5KJT2              	100.00%		C4M6S8              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for C4M6S8 as seed ortholog is 41%.
Alternative seed ortholog is C4LUT6 (7 bits away from this cluster)

Group of orthologs #487. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 E.histolytica:175

P0CR14              	100.00%		C4LW00              	100.00%
Bootstrap support for P0CR14 as seed ortholog is 100%.
Bootstrap support for C4LW00 as seed ortholog is 100%.

Group of orthologs #488. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 E.histolytica:175

Q5KEA3              	100.00%		C4LY41              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for C4LY41 as seed ortholog is 100%.

Group of orthologs #489. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 E.histolytica:175

Q5KLQ8              	100.00%		C4LZ14              	100.00%
Bootstrap support for Q5KLQ8 as seed ortholog is 100%.
Bootstrap support for C4LZ14 as seed ortholog is 100%.

Group of orthologs #490. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:81

Q5KEB3              	100.00%		B1N5A8              	100.00%
                    	       		C4MBP3              	99.09%
                    	       		C4M8W7              	96.04%
                    	       		C4MA54              	95.73%
                    	       		C4M3Q0              	95.12%
                    	       		C4M6Q4              	93.29%
                    	       		C4MAR7              	90.85%
                    	       		B1N5L9              	78.96%
                    	       		B1N623              	67.07%
                    	       		B1N5Y9              	28.96%
Bootstrap support for Q5KEB3 as seed ortholog is 99%.
Bootstrap support for B1N5A8 as seed ortholog is 99%.

Group of orthologs #491. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 E.histolytica:174

Q5K936              	100.00%		C4M795              	100.00%
                    	       		C4M2Q4              	39.75%
                    	       		C4MA14              	21.14%
Bootstrap support for Q5K936 as seed ortholog is 100%.
Bootstrap support for C4M795 as seed ortholog is 100%.

Group of orthologs #492. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:9 E.histolytica:33

Q5KGS1              	100.00%		Q5NT27              	100.00%
                    	       		Q5NT28              	100.00%
Bootstrap support for Q5KGS1 as seed ortholog is 60%.
Alternative seed ortholog is Q5KJ96 (9 bits away from this cluster)
Bootstrap support for Q5NT27 as seed ortholog is 92%.
Bootstrap support for Q5NT28 as seed ortholog is 92%.

Group of orthologs #493. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 E.histolytica:60

Q5KNU2              	100.00%		C4M0Z9              	100.00%
Bootstrap support for Q5KNU2 as seed ortholog is 100%.
Bootstrap support for C4M0Z9 as seed ortholog is 88%.

Group of orthologs #494. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 E.histolytica:173

Q5K7B1              	100.00%		C4M4F2              	100.00%
                    	       		C4LVF7              	74.57%
Bootstrap support for Q5K7B1 as seed ortholog is 100%.
Bootstrap support for C4M4F2 as seed ortholog is 100%.

Group of orthologs #495. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 E.histolytica:173

Q5KFC5              	100.00%		C4LWR5              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for C4LWR5 as seed ortholog is 100%.

Group of orthologs #496. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 E.histolytica:173

Q5KKH3              	100.00%		C4LZM1              	100.00%
Bootstrap support for Q5KKH3 as seed ortholog is 100%.
Bootstrap support for C4LZM1 as seed ortholog is 100%.

Group of orthologs #497. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 E.histolytica:173

Q5KF53              	100.00%		C4M693              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for C4M693 as seed ortholog is 100%.

Group of orthologs #498. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 E.histolytica:172

P0CS08              	100.00%		C4M8C4              	100.00%
                    	       		C4M3A1              	56.01%
Bootstrap support for P0CS08 as seed ortholog is 100%.
Bootstrap support for C4M8C4 as seed ortholog is 100%.

Group of orthologs #499. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 E.histolytica:172

Q5K979              	100.00%		C4LXM0              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for C4LXM0 as seed ortholog is 100%.

Group of orthologs #500. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:115 E.histolytica:172

Q5KQ60              	100.00%		C4M451              	100.00%
Bootstrap support for Q5KQ60 as seed ortholog is 99%.
Bootstrap support for C4M451 as seed ortholog is 100%.

Group of orthologs #501. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 E.histolytica:171

Q5K9Q6              	100.00%		C4M3N7              	100.00%
Bootstrap support for Q5K9Q6 as seed ortholog is 100%.
Bootstrap support for C4M3N7 as seed ortholog is 100%.

Group of orthologs #502. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:103 E.histolytica:171

Q5KE51              	100.00%		C4M3K8              	100.00%
Bootstrap support for Q5KE51 as seed ortholog is 98%.
Bootstrap support for C4M3K8 as seed ortholog is 100%.

Group of orthologs #503. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 E.histolytica:171

Q5KNK4              	100.00%		C4LY91              	100.00%
Bootstrap support for Q5KNK4 as seed ortholog is 100%.
Bootstrap support for C4LY91 as seed ortholog is 100%.

Group of orthologs #504. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 E.histolytica:171

Q5KQ17              	100.00%		C4M3T2              	100.00%
Bootstrap support for Q5KQ17 as seed ortholog is 100%.
Bootstrap support for C4M3T2 as seed ortholog is 100%.

Group of orthologs #505. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 E.histolytica:59

Q5KPB8              	100.00%		C4M373              	100.00%
                    	       		C4LVJ0              	15.57%
                    	       		C4MAP0              	14.49%
                    	       		C4LSW2              	14.37%
Bootstrap support for Q5KPB8 as seed ortholog is 100%.
Bootstrap support for C4M373 as seed ortholog is 89%.

Group of orthologs #506. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 E.histolytica:170

Q5KM57              	100.00%		C4LYA8              	100.00%
                    	       		C4M2J8              	6.07%
Bootstrap support for Q5KM57 as seed ortholog is 100%.
Bootstrap support for C4LYA8 as seed ortholog is 100%.

Group of orthologs #507. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 E.histolytica:170

P0CS80              	100.00%		C4LUV8              	100.00%
Bootstrap support for P0CS80 as seed ortholog is 100%.
Bootstrap support for C4LUV8 as seed ortholog is 100%.

Group of orthologs #508. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 E.histolytica:170

Q5KC13              	100.00%		C4LSK6              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for C4LSK6 as seed ortholog is 100%.

Group of orthologs #509. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:35 E.histolytica:170

Q5KGV6              	100.00%		C4M0S1              	100.00%
Bootstrap support for Q5KGV6 as seed ortholog is 80%.
Bootstrap support for C4M0S1 as seed ortholog is 100%.

Group of orthologs #510. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 E.histolytica:169

Q5KJZ6              	100.00%		B1N2P3              	100.00%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for B1N2P3 as seed ortholog is 100%.

Group of orthologs #511. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 E.histolytica:84

Q5KNA5              	100.00%		C4LTI7              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for C4LTI7 as seed ortholog is 96%.

Group of orthologs #512. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 E.histolytica:169

Q5KJY8              	100.00%		Q58P26              	100.00%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for Q58P26 as seed ortholog is 100%.

Group of orthologs #513. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 E.histolytica:168

Q5KEZ9              	100.00%		C4M7C8              	100.00%
                    	       		C4LSY3              	53.08%
                    	       		C4LTJ5              	49.24%
                    	       		B1N2K7              	46.22%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for C4M7C8 as seed ortholog is 100%.

Group of orthologs #514. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 E.histolytica:168

Q5K6Y9              	100.00%		Q86D27              	100.00%
                    	       		C4MAS9              	63.74%
                    	       		B1N417              	24.12%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for Q86D27 as seed ortholog is 100%.

Group of orthologs #515. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 E.histolytica:92

Q5KG23              	100.00%		C4M0A1              	100.00%
                    	       		C4LVP0              	12.37%
Bootstrap support for Q5KG23 as seed ortholog is 100%.
Bootstrap support for C4M0A1 as seed ortholog is 99%.

Group of orthologs #516. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:42 E.histolytica:16

Q5KCQ7              	100.00%		C4LX38              	100.00%
Bootstrap support for Q5KCQ7 as seed ortholog is 95%.
Bootstrap support for C4LX38 as seed ortholog is 73%.
Alternative seed ortholog is C4M947 (16 bits away from this cluster)

Group of orthologs #517. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:97 E.histolytica:168

Q5KJN4              	100.00%		C4M3P7              	100.00%
Bootstrap support for Q5KJN4 as seed ortholog is 98%.
Bootstrap support for C4M3P7 as seed ortholog is 100%.

Group of orthologs #518. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 E.histolytica:1

Q5KGU0              	100.00%		C4LSS2              	100.00%
Bootstrap support for Q5KGU0 as seed ortholog is 100%.
Bootstrap support for C4LSS2 as seed ortholog is 63%.
Alternative seed ortholog is C4M1F2 (1 bits away from this cluster)

Group of orthologs #519. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 E.histolytica:167

Q5KGV7              	100.00%		C4M0L5              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for C4M0L5 as seed ortholog is 100%.

Group of orthologs #520. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 E.histolytica:167

Q5KJ40              	100.00%		C4LZM7              	100.00%
Bootstrap support for Q5KJ40 as seed ortholog is 100%.
Bootstrap support for C4LZM7 as seed ortholog is 100%.

Group of orthologs #521. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 E.histolytica:74

Q5K720              	100.00%		Q1EQ12              	100.00%
Bootstrap support for Q5K720 as seed ortholog is 100%.
Bootstrap support for Q1EQ12 as seed ortholog is 99%.

Group of orthologs #522. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 E.histolytica:166

Q5KM03              	100.00%		C4M7V9              	100.00%
                    	       		C4LVH7              	87.96%
Bootstrap support for Q5KM03 as seed ortholog is 100%.
Bootstrap support for C4M7V9 as seed ortholog is 100%.

Group of orthologs #523. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 E.histolytica:90

Q5KCE0              	100.00%		C4M4K7              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for C4M4K7 as seed ortholog is 99%.

Group of orthologs #524. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 E.histolytica:166

Q5KND4              	100.00%		C4LUV5              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for C4LUV5 as seed ortholog is 100%.

Group of orthologs #525. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 E.histolytica:165

Q5KM68              	100.00%		B1N316              	100.00%
                    	       		C4LZP6              	100.00%
                    	       		C4M2R7              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for B1N316 as seed ortholog is 100%.
Bootstrap support for C4LZP6 as seed ortholog is 100%.
Bootstrap support for C4M2R7 as seed ortholog is 100%.

Group of orthologs #526. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:56 E.histolytica:26

Q5K810              	100.00%		C4LXP5              	100.00%
                    	       		C4M2C0              	100.00%
                    	       		Q5NSZ3              	6.90%
Bootstrap support for Q5K810 as seed ortholog is 97%.
Bootstrap support for C4LXP5 as seed ortholog is 88%.
Bootstrap support for C4M2C0 as seed ortholog is 87%.

Group of orthologs #527. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:45 E.histolytica:164

Q5KP54              	100.00%		C4M1X1              	100.00%
Bootstrap support for Q5KP54 as seed ortholog is 91%.
Bootstrap support for C4M1X1 as seed ortholog is 100%.

Group of orthologs #528. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 E.histolytica:163

Q5KIQ7              	100.00%		C4M298              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for C4M298 as seed ortholog is 100%.

Group of orthologs #529. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 E.histolytica:163

Q5KMT0              	100.00%		C4M599              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for C4M599 as seed ortholog is 100%.

Group of orthologs #530. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 E.histolytica:162

Q5KDG6              	100.00%		C4M3Y4              	100.00%
Bootstrap support for Q5KDG6 as seed ortholog is 100%.
Bootstrap support for C4M3Y4 as seed ortholog is 100%.

Group of orthologs #531. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 E.histolytica:161

P0CP46              	100.00%		C4LWS1              	100.00%
                    	       		C4M6Y2              	48.28%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for C4LWS1 as seed ortholog is 100%.

Group of orthologs #532. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 E.histolytica:161

Q5KIF8              	100.00%		C4MAW7              	100.00%
                    	       		B1N5R4              	32.56%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for C4MAW7 as seed ortholog is 100%.

Group of orthologs #533. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 E.histolytica:161

Q5KB12              	100.00%		C4LUX4              	100.00%
Bootstrap support for Q5KB12 as seed ortholog is 100%.
Bootstrap support for C4LUX4 as seed ortholog is 100%.

Group of orthologs #534. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 E.histolytica:49

Q5KN25              	100.00%		B1N5S3              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for B1N5S3 as seed ortholog is 99%.

Group of orthologs #535. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:109 E.histolytica:27

Q5KN16              	100.00%		C4LYL7              	100.00%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for C4LYL7 as seed ortholog is 85%.

Group of orthologs #536. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 E.histolytica:86

Q5KMT3              	100.00%		C4LWH7              	100.00%
P0CO04              	87.62%		C4LY78              	92.74%
                    	       		C4M0Z4              	8.06%
Bootstrap support for Q5KMT3 as seed ortholog is 100%.
Bootstrap support for C4LWH7 as seed ortholog is 99%.

Group of orthologs #537. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 E.histolytica:160

Q5K777              	100.00%		C4LUW4              	100.00%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for C4LUW4 as seed ortholog is 100%.

Group of orthologs #538. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 E.histolytica:160

Q5KM42              	100.00%		C4M0I9              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 100%.
Bootstrap support for C4M0I9 as seed ortholog is 100%.

Group of orthologs #539. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 E.histolytica:159

P0CQ50              	100.00%		C4LS99              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for C4LS99 as seed ortholog is 100%.

Group of orthologs #540. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 E.histolytica:159

P0CO44              	100.00%		C4M4V3              	100.00%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for C4M4V3 as seed ortholog is 100%.

Group of orthologs #541. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 E.histolytica:159

Q5KLK2              	100.00%		C4LVM7              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for C4LVM7 as seed ortholog is 100%.

Group of orthologs #542. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 E.histolytica:80

Q5KGB2              	100.00%		Q1EQ13              	100.00%
Bootstrap support for Q5KGB2 as seed ortholog is 100%.
Bootstrap support for Q1EQ13 as seed ortholog is 100%.

Group of orthologs #543. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 E.histolytica:158

Q5KBY0              	100.00%		C4LT63              	100.00%
                    	       		C4LUD0              	94.85%
                    	       		C4M5S7              	93.67%
                    	       		C4LUR8              	80.45%
                    	       		C4M4V4              	79.22%
                    	       		C4M1M9              	10.59%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for C4LT63 as seed ortholog is 100%.

Group of orthologs #544. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:97

Q5KFJ2              	100.00%		C4LWU1              	100.00%
                    	       		C4M743              	45.63%
                    	       		C4LZR0              	43.69%
                    	       		B1N3N9              	30.10%
                    	       		C4M117              	10.10%
Bootstrap support for Q5KFJ2 as seed ortholog is 99%.
Bootstrap support for C4LWU1 as seed ortholog is 99%.

Group of orthologs #545. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 E.histolytica:157

Q5KNU1              	100.00%		Q51D88              	100.00%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for Q51D88 as seed ortholog is 100%.

Group of orthologs #546. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:86

Q5KAZ7              	100.00%		C4LTX1              	100.00%
Q5KDJ3              	13.62%		
Bootstrap support for Q5KAZ7 as seed ortholog is 99%.
Bootstrap support for C4LTX1 as seed ortholog is 99%.

Group of orthologs #547. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 E.histolytica:156

Q5KGA8              	100.00%		C4LXC1              	100.00%
                    	       		C4M1I4              	5.08%
Bootstrap support for Q5KGA8 as seed ortholog is 100%.
Bootstrap support for C4LXC1 as seed ortholog is 100%.

Group of orthologs #548. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:114 E.histolytica:156

P0CS40              	100.00%		C4M2P0              	100.00%
Bootstrap support for P0CS40 as seed ortholog is 99%.
Bootstrap support for C4M2P0 as seed ortholog is 100%.

Group of orthologs #549. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 E.histolytica:156

Q5KN51              	100.00%		C4LW54              	100.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for C4LW54 as seed ortholog is 100%.

Group of orthologs #550. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 E.histolytica:155

Q5KEX8              	100.00%		C4M7A5              	100.00%
                    	       		C4M0C6              	88.97%
                    	       		C4M7H3              	88.24%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for C4M7A5 as seed ortholog is 100%.

Group of orthologs #551. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 E.histolytica:155

Q5KDE6              	100.00%		C4LSY6              	100.00%
Bootstrap support for Q5KDE6 as seed ortholog is 100%.
Bootstrap support for C4LSY6 as seed ortholog is 100%.

Group of orthologs #552. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:88 E.histolytica:155

Q5KFM4              	100.00%		C4LXB3              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 99%.
Bootstrap support for C4LXB3 as seed ortholog is 100%.

Group of orthologs #553. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 E.histolytica:155

Q5KCX5              	100.00%		C4M6M9              	100.00%
Bootstrap support for Q5KCX5 as seed ortholog is 100%.
Bootstrap support for C4M6M9 as seed ortholog is 100%.

Group of orthologs #554. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 E.histolytica:155

Q5KJJ4              	100.00%		C4M0T7              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for C4M0T7 as seed ortholog is 100%.

Group of orthologs #555. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 E.histolytica:154

Q5KMA0              	100.00%		B1N3F8              	100.00%
                    	       		B1N420              	98.16%
                    	       		C4M7V3              	80.37%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for B1N3F8 as seed ortholog is 100%.

Group of orthologs #556. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 E.histolytica:71

Q5K8A5              	100.00%		C4M530              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for C4M530 as seed ortholog is 98%.

Group of orthologs #557. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 E.histolytica:154

Q5K9Y2              	100.00%		C4M6T7              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for C4M6T7 as seed ortholog is 100%.

Group of orthologs #558. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 E.histolytica:153

Q5KFV8              	100.00%		O96908              	100.00%
                    	       		C4LT93              	33.73%
Bootstrap support for Q5KFV8 as seed ortholog is 100%.
Bootstrap support for O96908 as seed ortholog is 100%.

Group of orthologs #559. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 E.histolytica:153

Q5KJ01              	100.00%		C4LYY8              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for C4LYY8 as seed ortholog is 100%.

Group of orthologs #560. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:27 E.histolytica:23

Q5K7V1              	100.00%		Q9BLE9              	100.00%
Bootstrap support for Q5K7V1 as seed ortholog is 87%.
Bootstrap support for Q9BLE9 as seed ortholog is 74%.
Alternative seed ortholog is Q9BLE7 (23 bits away from this cluster)

Group of orthologs #561. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 E.histolytica:152

P0CM34              	100.00%		C4LZU7              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for C4LZU7 as seed ortholog is 100%.

Group of orthologs #562. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 E.histolytica:152

Q5K9Y4              	100.00%		C4M1Q8              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for C4M1Q8 as seed ortholog is 100%.

Group of orthologs #563. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 E.histolytica:152

P0CS50              	100.00%		Q1EQ52              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 100%.
Bootstrap support for Q1EQ52 as seed ortholog is 100%.

Group of orthologs #564. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 E.histolytica:74

Q5KKS4              	100.00%		C4LZA9              	100.00%
Bootstrap support for Q5KKS4 as seed ortholog is 100%.
Bootstrap support for C4LZA9 as seed ortholog is 98%.

Group of orthologs #565. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 E.histolytica:152

Q5KFB0              	100.00%		Q76L89              	100.00%
Bootstrap support for Q5KFB0 as seed ortholog is 100%.
Bootstrap support for Q76L89 as seed ortholog is 100%.

Group of orthologs #566. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 E.histolytica:150

Q5KIH4              	100.00%		C4M0Z2              	100.00%
                    	       		C4M7N8              	100.00%
                    	       		C4M0P7              	97.56%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for C4M0Z2 as seed ortholog is 100%.
Bootstrap support for C4M7N8 as seed ortholog is 100%.

Group of orthologs #567. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 E.histolytica:150

Q5KGI2              	100.00%		C4LYN4              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for C4LYN4 as seed ortholog is 100%.

Group of orthologs #568. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:13 E.histolytica:149

Q5K8L7              	100.00%		C4LY23              	100.00%
                    	       		B1N3A5              	43.67%
Bootstrap support for Q5K8L7 as seed ortholog is 82%.
Bootstrap support for C4LY23 as seed ortholog is 100%.

Group of orthologs #569. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 E.histolytica:149

Q5K8H5              	100.00%		C4LUN4              	100.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for C4LUN4 as seed ortholog is 100%.

Group of orthologs #570. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 E.histolytica:149

Q5K6X5              	100.00%		C4M6E4              	100.00%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for C4M6E4 as seed ortholog is 100%.

Group of orthologs #571. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 E.histolytica:149

Q5KL20              	100.00%		C4LTL2              	100.00%
Bootstrap support for Q5KL20 as seed ortholog is 100%.
Bootstrap support for C4LTL2 as seed ortholog is 100%.

Group of orthologs #572. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:44 E.histolytica:149

Q5KM13              	100.00%		C4LT11              	100.00%
Bootstrap support for Q5KM13 as seed ortholog is 88%.
Bootstrap support for C4LT11 as seed ortholog is 100%.

Group of orthologs #573. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 E.histolytica:149

Q5KPT7              	100.00%		C4LZ19              	100.00%
Bootstrap support for Q5KPT7 as seed ortholog is 100%.
Bootstrap support for C4LZ19 as seed ortholog is 100%.

Group of orthologs #574. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 E.histolytica:148

Q5K6Z0              	100.00%		C4M2J3              	100.00%
                    	       		C4LX05              	95.22%
                    	       		C4M0M6              	84.21%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for C4M2J3 as seed ortholog is 100%.

Group of orthologs #575. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 E.histolytica:148

Q5KBH4              	100.00%		C4M1K1              	100.00%
                    	       		B1N370              	65.85%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for C4M1K1 as seed ortholog is 100%.

Group of orthologs #576. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 E.histolytica:148

Q5KMV8              	100.00%		C4M3H9              	100.00%
Bootstrap support for Q5KMV8 as seed ortholog is 100%.
Bootstrap support for C4M3H9 as seed ortholog is 100%.

Group of orthologs #577. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 E.histolytica:147

Q5KLM2              	100.00%		C4M896              	100.00%
                    	       		C4M3J9              	25.00%
                    	       		C4LTW5              	19.23%
                    	       		C4LSC9              	16.96%
                    	       		B1N575              	6.12%
Bootstrap support for Q5KLM2 as seed ortholog is 100%.
Bootstrap support for C4M896 as seed ortholog is 100%.

Group of orthologs #578. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:43 E.histolytica:61

P0CS28              	100.00%		C4M6B2              	100.00%
                    	       		C4M926              	100.00%
                    	       		C4LZ38              	35.52%
Bootstrap support for P0CS28 as seed ortholog is 87%.
Bootstrap support for C4M6B2 as seed ortholog is 96%.
Bootstrap support for C4M926 as seed ortholog is 95%.

Group of orthologs #579. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 E.histolytica:147

Q5KLX2              	100.00%		C4LTT4              	100.00%
                    	       		B1N374              	68.77%
Bootstrap support for Q5KLX2 as seed ortholog is 100%.
Bootstrap support for C4LTT4 as seed ortholog is 100%.

Group of orthologs #580. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:61

Q5KAP0              	100.00%		C4M9L2              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 99%.
Bootstrap support for C4M9L2 as seed ortholog is 99%.

Group of orthologs #581. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 E.histolytica:147

Q5KP07              	100.00%		C4M2M2              	100.00%
Bootstrap support for Q5KP07 as seed ortholog is 100%.
Bootstrap support for C4M2M2 as seed ortholog is 100%.

Group of orthologs #582. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:146

Q5K7I5              	100.00%		C4M8M3              	100.00%
                    	       		C4M3F3              	94.27%
                    	       		B1N444              	59.16%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for C4M8M3 as seed ortholog is 100%.

Group of orthologs #583. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:146

Q5KAX8              	100.00%		B1N507              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for B1N507 as seed ortholog is 100%.

Group of orthologs #584. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:146

P0CL98              	100.00%		C4M1C3              	100.00%
Bootstrap support for P0CL98 as seed ortholog is 100%.
Bootstrap support for C4M1C3 as seed ortholog is 100%.

Group of orthologs #585. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:89 E.histolytica:87

Q5KFG5              	100.00%		C4LV49              	100.00%
Bootstrap support for Q5KFG5 as seed ortholog is 99%.
Bootstrap support for C4LV49 as seed ortholog is 99%.

Group of orthologs #586. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:146

Q5KCV9              	100.00%		C4M1J2              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for C4M1J2 as seed ortholog is 100%.

Group of orthologs #587. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:146

Q5KKG2              	100.00%		C4M3A8              	100.00%
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for C4M3A8 as seed ortholog is 100%.

Group of orthologs #588. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 E.histolytica:146

Q5KKR0              	100.00%		C4M5Q8              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for C4M5Q8 as seed ortholog is 100%.

Group of orthologs #589. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 E.histolytica:145

Q5K808              	100.00%		C4LYJ7              	100.00%
Q5KLR5              	34.96%		
Bootstrap support for Q5K808 as seed ortholog is 100%.
Bootstrap support for C4LYJ7 as seed ortholog is 100%.

Group of orthologs #590. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 E.histolytica:145

Q5KFT1              	100.00%		C4M2C2              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for C4M2C2 as seed ortholog is 100%.

Group of orthologs #591. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:144

Q5KNK5              	100.00%		C4M0H9              	100.00%
                    	       		O15635              	100.00%
                    	       		Q401L7              	81.18%
Bootstrap support for Q5KNK5 as seed ortholog is 57%.
Alternative seed ortholog is Q5KCX2 (25 bits away from this cluster)
Bootstrap support for C4M0H9 as seed ortholog is 100%.
Bootstrap support for O15635 as seed ortholog is 100%.

Group of orthologs #592. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:87

P0CQ52              	100.00%		C4LZ69              	100.00%
                    	       		C4M8P0              	91.00%
Bootstrap support for P0CQ52 as seed ortholog is 99%.
Bootstrap support for C4LZ69 as seed ortholog is 99%.

Group of orthologs #593. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 E.histolytica:144

Q5KIC5              	100.00%		C4LXC8              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for C4LXC8 as seed ortholog is 100%.

Group of orthologs #594. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 E.histolytica:144

Q5KP95              	100.00%		C4LUD5              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for C4LUD5 as seed ortholog is 100%.

Group of orthologs #595. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 E.histolytica:144

Q5KK13              	100.00%		C4LYE0              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for C4LYE0 as seed ortholog is 100%.

Group of orthologs #596. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:35 E.histolytica:46

Q5KJK0              	100.00%		C4M0U8              	100.00%
Bootstrap support for Q5KJK0 as seed ortholog is 95%.
Bootstrap support for C4M0U8 as seed ortholog is 98%.

Group of orthologs #597. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 E.histolytica:1

Q5KLQ5              	100.00%		C4M690              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for C4M690 as seed ortholog is 48%.
Alternative seed ortholog is C4M3A3 (1 bits away from this cluster)

Group of orthologs #598. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 E.histolytica:143

Q5KCP3              	100.00%		C4LZS2              	100.00%
                    	       		C4M123              	100.00%
                    	       		C4M7G9              	100.00%
Bootstrap support for Q5KCP3 as seed ortholog is 100%.
Bootstrap support for C4LZS2 as seed ortholog is 100%.
Bootstrap support for C4M123 as seed ortholog is 100%.
Bootstrap support for C4M7G9 as seed ortholog is 100%.

Group of orthologs #599. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 E.histolytica:143

Q5KP27              	100.00%		B1N4K0              	100.00%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for B1N4K0 as seed ortholog is 100%.

Group of orthologs #600. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 E.histolytica:143

Q5KG94              	100.00%		C4M782              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for C4M782 as seed ortholog is 100%.

Group of orthologs #601. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 E.histolytica:142

Q5KAR1              	100.00%		C4LTH5              	100.00%
Bootstrap support for Q5KAR1 as seed ortholog is 100%.
Bootstrap support for C4LTH5 as seed ortholog is 100%.

Group of orthologs #602. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 E.histolytica:142

Q5KJ58              	100.00%		C4M5A7              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for C4M5A7 as seed ortholog is 100%.

Group of orthologs #603. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 E.histolytica:142

Q5KLP4              	100.00%		C4M3N6              	100.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for C4M3N6 as seed ortholog is 100%.

Group of orthologs #604. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:83 E.histolytica:81

P0CM54              	100.00%		C4MBI6              	100.00%
Bootstrap support for P0CM54 as seed ortholog is 99%.
Bootstrap support for C4MBI6 as seed ortholog is 99%.

Group of orthologs #605. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 E.histolytica:141

Q5KFZ1              	100.00%		C4M2A3              	100.00%
Bootstrap support for Q5KFZ1 as seed ortholog is 100%.
Bootstrap support for C4M2A3 as seed ortholog is 100%.

Group of orthologs #606. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 E.histolytica:140

Q5KJA5              	30.13%		C4M013              	100.00%
Q5KJD6              	100.00%		C4MAJ4              	100.00%
Q5K8F0              	28.21%		B1N5B7              	30.80%
                    	       		C4M9L8              	30.07%
                    	       		C4LWI7              	30.07%
                    	       		B1N487              	29.35%
                    	       		B1N458              	18.12%
                    	       		B1N5J1              	18.12%
                    	       		C4MB27              	15.94%
Bootstrap support for Q5KJD6 as seed ortholog is 100%.
Bootstrap support for C4M013 as seed ortholog is 100%.
Bootstrap support for C4MAJ4 as seed ortholog is 100%.

Group of orthologs #607. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:7 E.histolytica:140

Q5K773              	100.00%		C4M4I0              	100.00%
Bootstrap support for Q5K773 as seed ortholog is 56%.
Alternative seed ortholog is Q5K7P7 (7 bits away from this cluster)
Bootstrap support for C4M4I0 as seed ortholog is 100%.

Group of orthologs #608. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 E.histolytica:140

Q5KFL6              	100.00%		C4LX74              	100.00%
Bootstrap support for Q5KFL6 as seed ortholog is 100%.
Bootstrap support for C4LX74 as seed ortholog is 100%.

Group of orthologs #609. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:138

Q5K7S5              	100.00%		C4M4M6              	100.00%
                    	       		B1N5V6              	44.22%
                    	       		B1N592              	43.54%
Bootstrap support for Q5K7S5 as seed ortholog is 100%.
Bootstrap support for C4M4M6 as seed ortholog is 100%.

Group of orthologs #610. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:138

Q5K7I8              	100.00%		C4M6B9              	100.00%
Bootstrap support for Q5K7I8 as seed ortholog is 100%.
Bootstrap support for C4M6B9 as seed ortholog is 100%.

Group of orthologs #611. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:138

Q5KBT3              	100.00%		C4M2U6              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for C4M2U6 as seed ortholog is 100%.

Group of orthologs #612. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:138

Q5KKQ4              	100.00%		C4LYF8              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for C4LYF8 as seed ortholog is 100%.

Group of orthologs #613. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:72

Q5KPH8              	100.00%		C4LV51              	100.00%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for C4LV51 as seed ortholog is 98%.

Group of orthologs #614. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 E.histolytica:138

Q5KB98              	100.00%		C4MA08              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for C4MA08 as seed ortholog is 100%.

Group of orthologs #615. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 E.histolytica:137

Q5K6Y5              	100.00%		B1N2N7              	100.00%
                    	       		C4LXI1              	12.26%
                    	       		C4M0G7              	10.16%
                    	       		C4LST4              	8.97%
                    	       		C4LUG1              	5.83%
Bootstrap support for Q5K6Y5 as seed ortholog is 100%.
Bootstrap support for B1N2N7 as seed ortholog is 100%.

Group of orthologs #616. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 E.histolytica:137

Q5K7J3              	100.00%		C4LV05              	100.00%
                    	       		C4M2W1              	100.00%
                    	       		C4LT96              	96.97%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for C4LV05 as seed ortholog is 100%.
Bootstrap support for C4M2W1 as seed ortholog is 100%.

Group of orthologs #617. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:70 E.histolytica:60

P40909              	100.00%		C4LY85              	100.00%
                    	       		C4M760              	100.00%
Bootstrap support for P40909 as seed ortholog is 100%.
Bootstrap support for C4LY85 as seed ortholog is 100%.
Bootstrap support for C4M760 as seed ortholog is 100%.

Group of orthologs #618. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 E.histolytica:62

P0CP10              	100.00%		C4LX44              	100.00%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for C4LX44 as seed ortholog is 83%.

Group of orthologs #619. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 E.histolytica:137

Q5KAU4              	100.00%		C4LVB9              	100.00%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for C4LVB9 as seed ortholog is 100%.

Group of orthologs #620. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:26 E.histolytica:91

Q5K9C2              	100.00%		C4M8E3              	100.00%
                    	       		C4MAA8              	38.01%
                    	       		C4LV56              	33.19%
Bootstrap support for Q5K9C2 as seed ortholog is 69%.
Alternative seed ortholog is Q5KLM4 (26 bits away from this cluster)
Bootstrap support for C4M8E3 as seed ortholog is 95%.

Group of orthologs #621. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 E.histolytica:136

P0CP62              	100.00%		C4LU26              	100.00%
Bootstrap support for P0CP62 as seed ortholog is 100%.
Bootstrap support for C4LU26 as seed ortholog is 100%.

Group of orthologs #622. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:54

Q5KDZ3              	100.00%		C4LW11              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 97%.
Bootstrap support for C4LW11 as seed ortholog is 91%.

Group of orthologs #623. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 E.histolytica:136

Q5KFP2              	100.00%		C4LZL2              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 100%.
Bootstrap support for C4LZL2 as seed ortholog is 100%.

Group of orthologs #624. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 E.histolytica:135

Q5KJL6              	100.00%		C4LWS0              	100.00%
                    	       		C4MA13              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for C4LWS0 as seed ortholog is 100%.
Bootstrap support for C4MA13 as seed ortholog is 100%.

Group of orthologs #625. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 E.histolytica:135

P0CN78              	100.00%		C4LZT0              	100.00%
Bootstrap support for P0CN78 as seed ortholog is 100%.
Bootstrap support for C4LZT0 as seed ortholog is 100%.

Group of orthologs #626. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 E.histolytica:135

Q5K776              	100.00%		C4M2U8              	100.00%
Bootstrap support for Q5K776 as seed ortholog is 100%.
Bootstrap support for C4M2U8 as seed ortholog is 100%.

Group of orthologs #627. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 E.histolytica:70

Q5K9W6              	100.00%		C4M9X0              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for C4M9X0 as seed ortholog is 99%.

Group of orthologs #628. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 E.histolytica:134

Q5KDT2              	100.00%		C4M8G7              	100.00%
Bootstrap support for Q5KDT2 as seed ortholog is 100%.
Bootstrap support for C4M8G7 as seed ortholog is 100%.

Group of orthologs #629. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 E.histolytica:133

Q5KGZ8              	100.00%		C4LTB8              	100.00%
                    	       		C4M2S8              	49.53%
Bootstrap support for Q5KGZ8 as seed ortholog is 100%.
Bootstrap support for C4LTB8 as seed ortholog is 100%.

Group of orthologs #630. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 E.histolytica:133

Q5KGV9              	100.00%		C4LWK0              	100.00%
                    	       		C4LV69              	99.52%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for C4LWK0 as seed ortholog is 100%.

Group of orthologs #631. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 E.histolytica:133

Q5KCI8              	100.00%		C4LVH5              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for C4LVH5 as seed ortholog is 100%.

Group of orthologs #632. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 E.histolytica:44

P0CS36              	100.00%		C4M7U1              	100.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for C4M7U1 as seed ortholog is 84%.

Group of orthologs #633. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:133

Q5KFU2              	100.00%		C4M1B2              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 99%.
Bootstrap support for C4M1B2 as seed ortholog is 100%.

Group of orthologs #634. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 E.histolytica:133

Q5KIJ9              	100.00%		C4M8G6              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for C4M8G6 as seed ortholog is 100%.

Group of orthologs #635. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 E.histolytica:132

Q5K762              	100.00%		C4LUM9              	100.00%
Bootstrap support for Q5K762 as seed ortholog is 100%.
Bootstrap support for C4LUM9 as seed ortholog is 100%.

Group of orthologs #636. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 E.histolytica:132

Q5K974              	100.00%		C4LZF8              	100.00%
Bootstrap support for Q5K974 as seed ortholog is 100%.
Bootstrap support for C4LZF8 as seed ortholog is 100%.

Group of orthologs #637. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 E.histolytica:131

Q5K9H6              	100.00%		C4LVQ3              	100.00%
Q5KGF6              	18.52%		Q70S43              	55.33%
Bootstrap support for Q5K9H6 as seed ortholog is 100%.
Bootstrap support for C4LVQ3 as seed ortholog is 100%.

Group of orthologs #638. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 E.histolytica:131

P0CQ18              	100.00%		C4M8D6              	100.00%
P0CQ20              	58.04%		C4M1I8              	49.05%
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for C4M8D6 as seed ortholog is 100%.

Group of orthologs #639. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 E.histolytica:131

Q5KLK6              	100.00%		C4LSZ3              	100.00%
                    	       		C4M0M9              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for C4LSZ3 as seed ortholog is 100%.
Bootstrap support for C4M0M9 as seed ortholog is 100%.

Group of orthologs #640. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 E.histolytica:59

Q5KP23              	100.00%		C4M7C6              	100.00%
Bootstrap support for Q5KP23 as seed ortholog is 100%.
Bootstrap support for C4M7C6 as seed ortholog is 98%.

Group of orthologs #641. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 E.histolytica:130

Q5KL21              	100.00%		C4LTC8              	100.00%
                    	       		C4M2P4              	20.76%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for C4LTC8 as seed ortholog is 100%.

Group of orthologs #642. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:43 E.histolytica:129

P0CR34              	100.00%		C4M3T5              	100.00%
                    	       		C4M1Y9              	56.18%
                    	       		C4LZ04              	16.60%
Bootstrap support for P0CR34 as seed ortholog is 88%.
Bootstrap support for C4M3T5 as seed ortholog is 100%.

Group of orthologs #643. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 E.histolytica:129

Q5KPM8              	100.00%		C4LZZ0              	100.00%
                    	       		C4M919              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for C4LZZ0 as seed ortholog is 100%.
Bootstrap support for C4M919 as seed ortholog is 100%.

Group of orthologs #644. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 E.histolytica:129

Q5KPC1              	100.00%		C4M183              	100.00%
                    	       		C4LXM2              	11.40%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for C4M183 as seed ortholog is 100%.

Group of orthologs #645. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 E.histolytica:129

Q5KH26              	100.00%		C4LUI8              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for C4LUI8 as seed ortholog is 100%.

Group of orthologs #646. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 E.histolytica:129

Q5KIE6              	100.00%		C4LZA0              	100.00%
Bootstrap support for Q5KIE6 as seed ortholog is 100%.
Bootstrap support for C4LZA0 as seed ortholog is 100%.

Group of orthologs #647. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 E.histolytica:129

Q5K7Y2              	100.00%		C4M9R9              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for C4M9R9 as seed ortholog is 100%.

Group of orthologs #648. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:9 E.histolytica:42

Q5KG67              	100.00%		C4M463              	100.00%
Bootstrap support for Q5KG67 as seed ortholog is 70%.
Alternative seed ortholog is Q5KN28 (9 bits away from this cluster)
Bootstrap support for C4M463 as seed ortholog is 93%.

Group of orthologs #649. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:78 E.histolytica:87

Q5KIZ8              	100.00%		C4M3M3              	100.00%
Bootstrap support for Q5KIZ8 as seed ortholog is 98%.
Bootstrap support for C4M3M3 as seed ortholog is 99%.

Group of orthologs #650. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 E.histolytica:129

Q5KJN1              	100.00%		C4M445              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for C4M445 as seed ortholog is 100%.

Group of orthologs #651. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 E.histolytica:66

Q5KFD4              	100.00%		C4M218              	100.00%
                    	       		B1N3W0              	46.98%
Bootstrap support for Q5KFD4 as seed ortholog is 100%.
Bootstrap support for C4M218 as seed ortholog is 99%.

Group of orthologs #652. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 E.histolytica:128

P0CR72              	100.00%		C4LUZ3              	100.00%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for C4LUZ3 as seed ortholog is 100%.

Group of orthologs #653. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 E.histolytica:128

Q5KEH0              	100.00%		C4LSS0              	100.00%
Bootstrap support for Q5KEH0 as seed ortholog is 100%.
Bootstrap support for C4LSS0 as seed ortholog is 100%.

Group of orthologs #654. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 E.histolytica:128

Q5KL89              	100.00%		C4LV64              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for C4LV64 as seed ortholog is 100%.

Group of orthologs #655. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:128

Q5KPE3              	100.00%		C4M0V9              	100.00%
Bootstrap support for Q5KPE3 as seed ortholog is 90%.
Bootstrap support for C4M0V9 as seed ortholog is 100%.

Group of orthologs #656. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 E.histolytica:127

Q5KKY7              	100.00%		C4LW59              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for C4LW59 as seed ortholog is 100%.

Group of orthologs #657. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 E.histolytica:127

Q5KMC4              	100.00%		C4LYZ9              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for C4LYZ9 as seed ortholog is 100%.

Group of orthologs #658. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 E.histolytica:127

Q5KGM3              	100.00%		Q76L90              	100.00%
Bootstrap support for Q5KGM3 as seed ortholog is 100%.
Bootstrap support for Q76L90 as seed ortholog is 100%.

Group of orthologs #659. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 E.histolytica:126

Q5KG95              	100.00%		C4M1F5              	100.00%
Q5KAX2              	21.49%		C4M7E8              	6.56%
Bootstrap support for Q5KG95 as seed ortholog is 100%.
Bootstrap support for C4M1F5 as seed ortholog is 100%.

Group of orthologs #660. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 E.histolytica:126

P0CR70              	100.00%		C4LVU5              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for C4LVU5 as seed ortholog is 100%.

Group of orthologs #661. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 E.histolytica:126

Q5KCC1              	100.00%		C4LWQ0              	100.00%
Bootstrap support for Q5KCC1 as seed ortholog is 100%.
Bootstrap support for C4LWQ0 as seed ortholog is 100%.

Group of orthologs #662. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 E.histolytica:126

Q5KKJ2              	100.00%		C4LVY6              	100.00%
Bootstrap support for Q5KKJ2 as seed ortholog is 100%.
Bootstrap support for C4LVY6 as seed ortholog is 100%.

Group of orthologs #663. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 E.histolytica:125

Q5KGM8              	100.00%		C4LTE3              	100.00%
                    	       		C4LYF9              	100.00%
                    	       		C4M9F8              	100.00%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for C4LTE3 as seed ortholog is 100%.
Bootstrap support for C4LYF9 as seed ortholog is 100%.
Bootstrap support for C4M9F8 as seed ortholog is 100%.

Group of orthologs #664. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 E.histolytica:125

P0CN98              	100.00%		C4M2W3              	100.00%
                    	       		C4LW06              	93.55%
Bootstrap support for P0CN98 as seed ortholog is 100%.
Bootstrap support for C4M2W3 as seed ortholog is 100%.

Group of orthologs #665. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 E.histolytica:125

P0CP72              	100.00%		C4LW89              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for C4LW89 as seed ortholog is 100%.

Group of orthologs #666. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:45 E.histolytica:125

P0CN18              	100.00%		C4LWV1              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 83%.
Bootstrap support for C4LWV1 as seed ortholog is 100%.

Group of orthologs #667. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 E.histolytica:124

Q5KKY5              	100.00%		C4M5V7              	100.00%
                    	       		C4M466              	84.96%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for C4M5V7 as seed ortholog is 100%.

Group of orthologs #668. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 E.histolytica:124

Q5KGI4              	100.00%		C4LUX9              	100.00%
Bootstrap support for Q5KGI4 as seed ortholog is 100%.
Bootstrap support for C4LUX9 as seed ortholog is 100%.

Group of orthologs #669. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 E.histolytica:124

Q5KJG1              	100.00%		C4LV20              	100.00%
Bootstrap support for Q5KJG1 as seed ortholog is 100%.
Bootstrap support for C4LV20 as seed ortholog is 100%.

Group of orthologs #670. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 E.histolytica:5

Q5KCD7              	100.00%		C4M5E0              	100.00%
Bootstrap support for Q5KCD7 as seed ortholog is 100%.
Bootstrap support for C4M5E0 as seed ortholog is 62%.
Alternative seed ortholog is C4M2I9 (5 bits away from this cluster)

Group of orthologs #671. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 E.histolytica:123

Q5K9W9              	100.00%		C4LVW4              	100.00%
Bootstrap support for Q5K9W9 as seed ortholog is 100%.
Bootstrap support for C4LVW4 as seed ortholog is 100%.

Group of orthologs #672. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 E.histolytica:123

P0CP64              	100.00%		C4M4K5              	100.00%
Bootstrap support for P0CP64 as seed ortholog is 100%.
Bootstrap support for C4M4K5 as seed ortholog is 100%.

Group of orthologs #673. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 E.histolytica:123

Q5KI17              	100.00%		C4LZH9              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for C4LZH9 as seed ortholog is 100%.

Group of orthologs #674. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 E.histolytica:122

Q5KBS3              	100.00%		P34107              	100.00%
                    	       		C4LX20              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for P34107 as seed ortholog is 100%.
Bootstrap support for C4LX20 as seed ortholog is 100%.

Group of orthologs #675. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 E.histolytica:122

Q5KIG9              	100.00%		C4LY48              	100.00%
Bootstrap support for Q5KIG9 as seed ortholog is 100%.
Bootstrap support for C4LY48 as seed ortholog is 100%.

Group of orthologs #676. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 E.histolytica:122

Q5KID5              	100.00%		C4M411              	100.00%
Bootstrap support for Q5KID5 as seed ortholog is 100%.
Bootstrap support for C4M411 as seed ortholog is 100%.

Group of orthologs #677. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 E.histolytica:121

Q5KHZ1              	100.00%		C4LYN9              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for C4LYN9 as seed ortholog is 100%.

Group of orthologs #678. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 E.histolytica:121

Q5KA76              	100.00%		C4M7F6              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for C4M7F6 as seed ortholog is 100%.

Group of orthologs #679. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 E.histolytica:121

Q5KPB1              	100.00%		C4LWB5              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for C4LWB5 as seed ortholog is 100%.

Group of orthologs #680. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 E.histolytica:121

Q5KGB9              	100.00%		C4M4G1              	100.00%
Bootstrap support for Q5KGB9 as seed ortholog is 100%.
Bootstrap support for C4M4G1 as seed ortholog is 100%.

Group of orthologs #681. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:10 E.histolytica:44

Q5KN13              	100.00%		Q76KF6              	100.00%
Bootstrap support for Q5KN13 as seed ortholog is 61%.
Alternative seed ortholog is Q5KFZ5 (10 bits away from this cluster)
Bootstrap support for Q76KF6 as seed ortholog is 90%.

Group of orthologs #682. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 E.histolytica:120

Q5K774              	100.00%		C4M8V3              	100.00%
                    	       		C4M1G8              	15.73%
Bootstrap support for Q5K774 as seed ortholog is 100%.
Bootstrap support for C4M8V3 as seed ortholog is 100%.

Group of orthologs #683. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 E.histolytica:33

Q5KBR9              	100.00%		C4LXA6              	100.00%
                    	       		C4MBK7              	7.73%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for C4LXA6 as seed ortholog is 96%.

Group of orthologs #684. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 E.histolytica:119

Q5K7H6              	100.00%		C4LU87              	100.00%
Bootstrap support for Q5K7H6 as seed ortholog is 100%.
Bootstrap support for C4LU87 as seed ortholog is 100%.

Group of orthologs #685. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 E.histolytica:119

Q5KIJ6              	100.00%		C4LSV0              	100.00%
Bootstrap support for Q5KIJ6 as seed ortholog is 100%.
Bootstrap support for C4LSV0 as seed ortholog is 100%.

Group of orthologs #686. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:60 E.histolytica:119

Q5KCK9              	100.00%		C4LZV3              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 99%.
Bootstrap support for C4LZV3 as seed ortholog is 100%.

Group of orthologs #687. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 E.histolytica:119

Q5KM35              	100.00%		C4LSK4              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 100%.
Bootstrap support for C4LSK4 as seed ortholog is 100%.

Group of orthologs #688. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 E.histolytica:119

Q5KQ04              	100.00%		C4MA46              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for C4MA46 as seed ortholog is 100%.

Group of orthologs #689. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 E.histolytica:118

Q5KM60              	100.00%		C4LX57              	100.00%
                    	       		C4MAY8              	97.01%
Bootstrap support for Q5KM60 as seed ortholog is 100%.
Bootstrap support for C4LX57 as seed ortholog is 100%.

Group of orthologs #690. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 E.histolytica:118

P0CO14              	100.00%		C4LWT5              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for C4LWT5 as seed ortholog is 100%.

Group of orthologs #691. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 E.histolytica:118

P0CQ12              	100.00%		C4M4F3              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for C4M4F3 as seed ortholog is 100%.

Group of orthologs #692. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 E.histolytica:118

P0CR74              	100.00%		C4M6A1              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for C4M6A1 as seed ortholog is 100%.

Group of orthologs #693. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 E.histolytica:117

Q5KBT5              	100.00%		C4M0D4              	100.00%
                    	       		B1N344              	57.36%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for C4M0D4 as seed ortholog is 100%.

Group of orthologs #694. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 E.histolytica:117

Q5KKW8              	100.00%		C4M2Z9              	100.00%
Bootstrap support for Q5KKW8 as seed ortholog is 100%.
Bootstrap support for C4M2Z9 as seed ortholog is 100%.

Group of orthologs #695. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:116

P0CR36              	100.00%		C4M3Y2              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 97%.
Bootstrap support for C4M3Y2 as seed ortholog is 100%.

Group of orthologs #696. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 E.histolytica:116

Q5KMP1              	100.00%		C4LUL1              	100.00%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for C4LUL1 as seed ortholog is 100%.

Group of orthologs #697. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 E.histolytica:116

Q5KKV3              	100.00%		C4LWF1              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for C4LWF1 as seed ortholog is 100%.

Group of orthologs #698. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:46 E.histolytica:115

P0CS54              	100.00%		C4LYY7              	100.00%
Bootstrap support for P0CS54 as seed ortholog is 84%.
Bootstrap support for C4LYY7 as seed ortholog is 100%.

Group of orthologs #699. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 E.histolytica:115

Q5KAD8              	100.00%		C4LWP5              	100.00%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for C4LWP5 as seed ortholog is 100%.

Group of orthologs #700. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 E.histolytica:115

Q5KBQ8              	100.00%		C4M291              	100.00%
Bootstrap support for Q5KBQ8 as seed ortholog is 100%.
Bootstrap support for C4M291 as seed ortholog is 100%.

Group of orthologs #701. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 E.histolytica:114

P0CS10              	100.00%		C4MBI7              	100.00%
                    	       		C4M4Q0              	15.10%
Bootstrap support for P0CS10 as seed ortholog is 100%.
Bootstrap support for C4MBI7 as seed ortholog is 100%.

Group of orthologs #702. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 E.histolytica:114

Q5KN65              	100.00%		C4M9C4              	100.00%
                    	       		C4M727              	96.82%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for C4M9C4 as seed ortholog is 100%.

Group of orthologs #703. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 E.histolytica:114

Q5KEF1              	100.00%		C4M8P1              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 100%.
Bootstrap support for C4M8P1 as seed ortholog is 100%.

Group of orthologs #704. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:113

Q5KK58              	100.00%		C4MA15              	100.00%
                    	       		C4LUT0              	77.03%
                    	       		C4M301              	26.33%
Bootstrap support for Q5KK58 as seed ortholog is 100%.
Bootstrap support for C4MA15 as seed ortholog is 100%.

Group of orthologs #705. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:41 E.histolytica:70

Q5KN90              	100.00%		C4LUM0              	100.00%
Q5KN24              	55.18%		
Bootstrap support for Q5KN90 as seed ortholog is 80%.
Bootstrap support for C4LUM0 as seed ortholog is 95%.

Group of orthologs #706. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:113

Q5KAI5              	100.00%		C4LXZ0              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for C4LXZ0 as seed ortholog is 100%.

Group of orthologs #707. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:27

P0CS68              	100.00%		C4M7C1              	100.00%
Bootstrap support for P0CS68 as seed ortholog is 100%.
Bootstrap support for C4M7C1 as seed ortholog is 76%.

Group of orthologs #708. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:113

Q5KIK2              	100.00%		C4M073              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for C4M073 as seed ortholog is 100%.

Group of orthologs #709. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:113

Q5KBH5              	100.00%		C4M7Y4              	100.00%
Bootstrap support for Q5KBH5 as seed ortholog is 100%.
Bootstrap support for C4M7Y4 as seed ortholog is 100%.

Group of orthologs #710. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 E.histolytica:53

Q5KKF3              	100.00%		C4M651              	100.00%
Bootstrap support for Q5KKF3 as seed ortholog is 100%.
Bootstrap support for C4M651 as seed ortholog is 92%.

Group of orthologs #711. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 E.histolytica:112

Q5KGZ9              	100.00%		C4M107              	100.00%
                    	       		C4MAV5              	5.95%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for C4M107 as seed ortholog is 100%.

Group of orthologs #712. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:71

P0CS32              	100.00%		C4LYM0              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 95%.
Bootstrap support for C4LYM0 as seed ortholog is 96%.

Group of orthologs #713. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 E.histolytica:112

Q5KEA1              	100.00%		C4M6W7              	100.00%
Bootstrap support for Q5KEA1 as seed ortholog is 100%.
Bootstrap support for C4M6W7 as seed ortholog is 100%.

Group of orthologs #714. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 E.histolytica:111

Q5KF97              	100.00%		C4LWS5              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for C4LWS5 as seed ortholog is 100%.

Group of orthologs #715. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 E.histolytica:111

Q5K9M5              	100.00%		C4M3W8              	100.00%
Bootstrap support for Q5K9M5 as seed ortholog is 100%.
Bootstrap support for C4M3W8 as seed ortholog is 100%.

Group of orthologs #716. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 E.histolytica:111

Q5KA28              	100.00%		C4M7W6              	100.00%
Bootstrap support for Q5KA28 as seed ortholog is 100%.
Bootstrap support for C4M7W6 as seed ortholog is 100%.

Group of orthologs #717. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:38 E.histolytica:111

Q5KJH5              	100.00%		C4M4S8              	100.00%
Bootstrap support for Q5KJH5 as seed ortholog is 83%.
Bootstrap support for C4M4S8 as seed ortholog is 100%.

Group of orthologs #718. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 E.histolytica:111

Q5KP80              	100.00%		C4M1A7              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for C4M1A7 as seed ortholog is 100%.

Group of orthologs #719. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 E.histolytica:110

P0CR82              	100.00%		C4M051              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for C4M051 as seed ortholog is 100%.

Group of orthologs #720. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 E.histolytica:110

Q5KBQ4              	100.00%		C4M6S1              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for C4M6S1 as seed ortholog is 100%.

Group of orthologs #721. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:26 E.histolytica:110

Q5KLF1              	100.00%		C4LXT9              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 90%.
Bootstrap support for C4LXT9 as seed ortholog is 100%.

Group of orthologs #722. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 E.histolytica:110

Q5KH84              	100.00%		C4M9W4              	100.00%
Bootstrap support for Q5KH84 as seed ortholog is 100%.
Bootstrap support for C4M9W4 as seed ortholog is 100%.

Group of orthologs #723. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 E.histolytica:109

Q5K8W6              	100.00%		C4LVZ4              	100.00%
Bootstrap support for Q5K8W6 as seed ortholog is 100%.
Bootstrap support for C4LVZ4 as seed ortholog is 100%.

Group of orthologs #724. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KLJ6              	100.00%		C4M569              	100.00%
                    	       		C4LSU3              	93.38%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for C4M569 as seed ortholog is 100%.

Group of orthologs #725. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

P0CS30              	100.00%		C4LT70              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 100%.
Bootstrap support for C4LT70 as seed ortholog is 100%.

Group of orthologs #726. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5K9F9              	100.00%		C4LTP3              	100.00%
Bootstrap support for Q5K9F9 as seed ortholog is 100%.
Bootstrap support for C4LTP3 as seed ortholog is 100%.

Group of orthologs #727. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KHA2              	100.00%		C4LSD9              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for C4LSD9 as seed ortholog is 100%.

Group of orthologs #728. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

P0CN80              	100.00%		C4M4C5              	100.00%
Bootstrap support for P0CN80 as seed ortholog is 100%.
Bootstrap support for C4M4C5 as seed ortholog is 100%.

Group of orthologs #729. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KE19              	100.00%		C4LZF4              	100.00%
Bootstrap support for Q5KE19 as seed ortholog is 100%.
Bootstrap support for C4LZF4 as seed ortholog is 100%.

Group of orthologs #730. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KAH0              	100.00%		C4M6L8              	100.00%
Bootstrap support for Q5KAH0 as seed ortholog is 100%.
Bootstrap support for C4M6L8 as seed ortholog is 100%.

Group of orthologs #731. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:66 E.histolytica:58

Q5KHU0              	100.00%		C4M2G1              	100.00%
Bootstrap support for Q5KHU0 as seed ortholog is 96%.
Bootstrap support for C4M2G1 as seed ortholog is 97%.

Group of orthologs #732. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KP38              	100.00%		C4LXV1              	100.00%
Bootstrap support for Q5KP38 as seed ortholog is 100%.
Bootstrap support for C4LXV1 as seed ortholog is 100%.

Group of orthologs #733. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KM94              	100.00%		C4M6U0              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for C4M6U0 as seed ortholog is 100%.

Group of orthologs #734. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 E.histolytica:108

Q5KPF3              	100.00%		C4M750              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for C4M750 as seed ortholog is 100%.

Group of orthologs #735. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 E.histolytica:107

Q5KNT0              	100.00%		C4LV36              	100.00%
                    	       		C4LV37              	100.00%
Bootstrap support for Q5KNT0 as seed ortholog is 100%.
Bootstrap support for C4LV36 as seed ortholog is 100%.
Bootstrap support for C4LV37 as seed ortholog is 100%.

Group of orthologs #736. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 E.histolytica:107

Q5KJT1              	100.00%		C4M012              	100.00%
                    	       		B1N4T3              	49.29%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for C4M012 as seed ortholog is 100%.

Group of orthologs #737. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 E.histolytica:107

Q5KPE9              	100.00%		C4M1N3              	100.00%
Bootstrap support for Q5KPE9 as seed ortholog is 100%.
Bootstrap support for C4M1N3 as seed ortholog is 100%.

Group of orthologs #738. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:40

Q5KN56              	100.00%		C4MB00              	100.00%
Q5K6U5              	100.00%		C4M985              	100.00%
                    	       		C4M0I3              	45.65%
                    	       		C4M5X2              	21.58%
                    	       		C4M210              	16.55%
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for Q5K6U5 as seed ortholog is 100%.
Bootstrap support for C4MB00 as seed ortholog is 86%.
Bootstrap support for C4M985 as seed ortholog is 69%.
Alternative seed ortholog is C4LXK2 (40 bits away from this cluster)

Group of orthologs #739. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:106

Q9HFU4              	100.00%		C4M8I8              	100.00%
Q5KAG8              	15.41%		B1N3V1              	58.11%
Bootstrap support for Q9HFU4 as seed ortholog is 100%.
Bootstrap support for C4M8I8 as seed ortholog is 100%.

Group of orthologs #740. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:106

Q5KBW6              	100.00%		B1N3K9              	100.00%
                    	       		C4M9F9              	91.48%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for B1N3K9 as seed ortholog is 100%.

Group of orthologs #741. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:58

Q5K7J1              	100.00%		C4LXG7              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for C4LXG7 as seed ortholog is 98%.

Group of orthologs #742. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:106

Q5KLZ3              	100.00%		C4LVP4              	100.00%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for C4LVP4 as seed ortholog is 100%.

Group of orthologs #743. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:13 E.histolytica:34

Q5KMV5              	100.00%		C4LVQ9              	100.00%
Bootstrap support for Q5KMV5 as seed ortholog is 61%.
Alternative seed ortholog is Q5KIM7 (13 bits away from this cluster)
Bootstrap support for C4LVQ9 as seed ortholog is 81%.

Group of orthologs #744. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:106

Q5KIZ3              	100.00%		C4M4I7              	100.00%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for C4M4I7 as seed ortholog is 100%.

Group of orthologs #745. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:106

Q5KGZ7              	100.00%		C4M913              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for C4M913 as seed ortholog is 100%.

Group of orthologs #746. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 E.histolytica:41

Q5KIZ9              	100.00%		C4MAH1              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for C4MAH1 as seed ortholog is 62%.
Alternative seed ortholog is C4M8F5 (41 bits away from this cluster)

Group of orthologs #747. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 E.histolytica:105

Q5KHA3              	100.00%		C4LUA6              	100.00%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for C4LUA6 as seed ortholog is 100%.

Group of orthologs #748. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 E.histolytica:105

Q5KBC4              	100.00%		C4M4X2              	100.00%
Bootstrap support for Q5KBC4 as seed ortholog is 100%.
Bootstrap support for C4M4X2 as seed ortholog is 100%.

Group of orthologs #749. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

P0CO82              	100.00%		C4LVE3              	100.00%
                    	       		C4LYV5              	11.32%
                    	       		C4LUB3              	6.54%
Bootstrap support for P0CO82 as seed ortholog is 100%.
Bootstrap support for C4LVE3 as seed ortholog is 100%.

Group of orthologs #750. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

Q5KFY9              	100.00%		C4M2I4              	100.00%
                    	       		C4LU03              	22.20%
                    	       		C4M7N4              	22.20%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for C4M2I4 as seed ortholog is 100%.

Group of orthologs #751. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:31 E.histolytica:104

Q5KA61              	100.00%		C4LYC2              	100.00%
                    	       		C4M8I1              	26.67%
Bootstrap support for Q5KA61 as seed ortholog is 73%.
Alternative seed ortholog is Q5KPC9 (31 bits away from this cluster)
Bootstrap support for C4LYC2 as seed ortholog is 100%.

Group of orthologs #752. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

Q5KH73              	100.00%		C4M9N3              	100.00%
                    	       		C4LUA7              	6.04%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for C4M9N3 as seed ortholog is 100%.

Group of orthologs #753. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

P0CO02              	100.00%		C4LV75              	100.00%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for C4LV75 as seed ortholog is 100%.

Group of orthologs #754. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

P0CO06              	100.00%		C4LXL7              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for C4LXL7 as seed ortholog is 100%.

Group of orthologs #755. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

Q5KGK7              	100.00%		C4LUH3              	100.00%
Bootstrap support for Q5KGK7 as seed ortholog is 100%.
Bootstrap support for C4LUH3 as seed ortholog is 100%.

Group of orthologs #756. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:26 E.histolytica:17

Q5KH15              	100.00%		C4LUF5              	100.00%
Bootstrap support for Q5KH15 as seed ortholog is 73%.
Alternative seed ortholog is Q5KEY2 (26 bits away from this cluster)
Bootstrap support for C4LUF5 as seed ortholog is 56%.
Alternative seed ortholog is C4LXH7 (17 bits away from this cluster)

Group of orthologs #757. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 E.histolytica:104

Q5KF63              	100.00%		C4LYD1              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for C4LYD1 as seed ortholog is 100%.

Group of orthologs #758. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:47 E.histolytica:33

Q5KIS6              	100.00%		C4LV95              	100.00%
Bootstrap support for Q5KIS6 as seed ortholog is 99%.
Bootstrap support for C4LV95 as seed ortholog is 96%.

Group of orthologs #759. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 E.histolytica:5

Q5KP11              	100.00%		C4LSN8              	100.00%
                    	       		C4M7A6              	15.58%
Bootstrap support for Q5KP11 as seed ortholog is 100%.
Bootstrap support for C4LSN8 as seed ortholog is 60%.
Alternative seed ortholog is C4LZD4 (5 bits away from this cluster)

Group of orthologs #760. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 E.histolytica:103

Q5KDS7              	100.00%		C4LSA0              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 100%.
Bootstrap support for C4LSA0 as seed ortholog is 100%.

Group of orthologs #761. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 E.histolytica:103

Q5KHF1              	100.00%		C4M9D5              	100.00%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for C4M9D5 as seed ortholog is 100%.

Group of orthologs #762. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 E.histolytica:102

Q5KFS7              	100.00%		Q1EQ11              	100.00%
Bootstrap support for Q5KFS7 as seed ortholog is 100%.
Bootstrap support for Q1EQ11 as seed ortholog is 100%.

Group of orthologs #763. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 E.histolytica:102

Q5KN73              	100.00%		C4MB46              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for C4MB46 as seed ortholog is 100%.

Group of orthologs #764. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:38 E.histolytica:101

Q5K8L2              	100.00%		C4M9X1              	100.00%
                    	       		C4M2F0              	21.39%
                    	       		C4MBH1              	20.08%
                    	       		C4M1W9              	13.70%
Bootstrap support for Q5K8L2 as seed ortholog is 83%.
Bootstrap support for C4M9X1 as seed ortholog is 100%.

Group of orthologs #765. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:101

Q5KAB6              	100.00%		C4LUV0              	100.00%
                    	       		B1N303              	93.43%
Bootstrap support for Q5KAB6 as seed ortholog is 100%.
Bootstrap support for C4LUV0 as seed ortholog is 100%.

Group of orthologs #766. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:101

P0CR50              	100.00%		C4LTY0              	100.00%
Bootstrap support for P0CR50 as seed ortholog is 100%.
Bootstrap support for C4LTY0 as seed ortholog is 100%.

Group of orthologs #767. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:101

P0CM26              	100.00%		C4LX08              	100.00%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for C4LX08 as seed ortholog is 100%.

Group of orthologs #768. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:101

P0CN46              	100.00%		C4M3N3              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for C4M3N3 as seed ortholog is 100%.

Group of orthologs #769. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:101

Q5KCY0              	100.00%		C4M713              	100.00%
Bootstrap support for Q5KCY0 as seed ortholog is 100%.
Bootstrap support for C4M713 as seed ortholog is 100%.

Group of orthologs #770. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 E.histolytica:101

Q5KLG7              	100.00%		C4M3V1              	100.00%
Bootstrap support for Q5KLG7 as seed ortholog is 100%.
Bootstrap support for C4M3V1 as seed ortholog is 100%.

Group of orthologs #771. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 E.histolytica:100

Q5KND0              	100.00%		C4LU65              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for C4LU65 as seed ortholog is 100%.

Group of orthologs #772. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 E.histolytica:100

Q5K8Z1              	100.00%		C4M9F7              	100.00%
Bootstrap support for Q5K8Z1 as seed ortholog is 100%.
Bootstrap support for C4M9F7 as seed ortholog is 100%.

Group of orthologs #773. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 E.histolytica:100

Q5KEC8              	100.00%		C4M937              	100.00%
Bootstrap support for Q5KEC8 as seed ortholog is 100%.
Bootstrap support for C4M937 as seed ortholog is 100%.

Group of orthologs #774. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KDU6              	100.00%		C4LSR1              	100.00%
                    	       		C4LT66              	100.00%
                    	       		C4LYP4              	100.00%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for C4LSR1 as seed ortholog is 100%.
Bootstrap support for C4LT66 as seed ortholog is 100%.
Bootstrap support for C4LYP4 as seed ortholog is 100%.

Group of orthologs #775. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KAG9              	100.00%		C4M4V6              	100.00%
                    	       		C4LWN1              	99.31%
                    	       		C4LV77              	9.79%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for C4M4V6 as seed ortholog is 100%.

Group of orthologs #776. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KF35              	100.00%		C4M8Y3              	100.00%
                    	       		C4LVN5              	46.35%
                    	       		C4LWQ1              	22.32%
Bootstrap support for Q5KF35 as seed ortholog is 100%.
Bootstrap support for C4M8Y3 as seed ortholog is 100%.

Group of orthologs #777. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KED8              	100.00%		C4LYK7              	100.00%
                    	       		B1N328              	16.32%
Bootstrap support for Q5KED8 as seed ortholog is 100%.
Bootstrap support for C4LYK7 as seed ortholog is 100%.

Group of orthologs #778. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KL56              	100.00%		C4M0X0              	100.00%
                    	       		B1N601              	23.94%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for C4M0X0 as seed ortholog is 100%.

Group of orthologs #779. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

P0CM06              	100.00%		C4LVG4              	100.00%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for C4LVG4 as seed ortholog is 100%.

Group of orthologs #780. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5K9X5              	100.00%		C4LU73              	100.00%
Bootstrap support for Q5K9X5 as seed ortholog is 100%.
Bootstrap support for C4LU73 as seed ortholog is 100%.

Group of orthologs #781. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KFG9              	100.00%		B1N4V3              	100.00%
Bootstrap support for Q5KFG9 as seed ortholog is 100%.
Bootstrap support for B1N4V3 as seed ortholog is 100%.

Group of orthologs #782. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

P0CS06              	100.00%		C4M352              	100.00%
Bootstrap support for P0CS06 as seed ortholog is 100%.
Bootstrap support for C4M352 as seed ortholog is 100%.

Group of orthologs #783. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KFB3              	100.00%		C4LZ16              	100.00%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for C4LZ16 as seed ortholog is 100%.

Group of orthologs #784. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

P0CM92              	100.00%		C4M8B4              	100.00%
Bootstrap support for P0CM92 as seed ortholog is 100%.
Bootstrap support for C4M8B4 as seed ortholog is 100%.

Group of orthologs #785. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KA81              	100.00%		C4M6J5              	100.00%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for C4M6J5 as seed ortholog is 100%.

Group of orthologs #786. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:19 E.histolytica:99

Q5KNW3              	100.00%		C4LXH0              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 83%.
Bootstrap support for C4LXH0 as seed ortholog is 100%.

Group of orthologs #787. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 E.histolytica:99

Q5KM44              	100.00%		C4M843              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for C4M843 as seed ortholog is 100%.

Group of orthologs #788. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 E.histolytica:49

Q5KG91              	100.00%		C4M6X1              	100.00%
                    	       		C4M4Y2              	24.32%
Bootstrap support for Q5KG91 as seed ortholog is 100%.
Bootstrap support for C4M6X1 as seed ortholog is 77%.

Group of orthologs #789. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 E.histolytica:98

Q5KFA1              	100.00%		C4LSX6              	100.00%
Bootstrap support for Q5KFA1 as seed ortholog is 100%.
Bootstrap support for C4LSX6 as seed ortholog is 100%.

Group of orthologs #790. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 E.histolytica:98

Q5KIJ7              	100.00%		C4LUX0              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for C4LUX0 as seed ortholog is 100%.

Group of orthologs #791. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 E.histolytica:98

Q5KCK3              	100.00%		C4M9H6              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for C4M9H6 as seed ortholog is 100%.

Group of orthologs #792. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 E.histolytica:97

Q5KAT1              	100.00%		C4LVV2              	100.00%
Q5KAU3              	71.87%		C4LVQ2              	23.94%
Bootstrap support for Q5KAT1 as seed ortholog is 100%.
Bootstrap support for C4LVV2 as seed ortholog is 100%.

Group of orthologs #793. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:50 E.histolytica:97

F5HFW5              	100.00%		C4M255              	100.00%
                    	       		C4LVV7              	94.55%
Bootstrap support for F5HFW5 as seed ortholog is 90%.
Bootstrap support for C4M255 as seed ortholog is 100%.

Group of orthologs #794. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 E.histolytica:97

Q5KAE9              	100.00%		C4LZL6              	100.00%
                    	       		C4M6H6              	100.00%
Bootstrap support for Q5KAE9 as seed ortholog is 100%.
Bootstrap support for C4LZL6 as seed ortholog is 100%.
Bootstrap support for C4M6H6 as seed ortholog is 100%.

Group of orthologs #795. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 E.histolytica:97

Q5KF20              	100.00%		C4LU38              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 100%.
Bootstrap support for C4LU38 as seed ortholog is 100%.

Group of orthologs #796. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 E.histolytica:97

P0CO42              	100.00%		C4M9S5              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 100%.
Bootstrap support for C4M9S5 as seed ortholog is 100%.

Group of orthologs #797. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:96

Q5KA03              	100.00%		C4M1E7              	100.00%
Q5KPE0              	19.59%		C4LSP4              	29.76%
                    	       		C4LU54              	21.19%
                    	       		C4M0E4              	7.44%
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for C4M1E7 as seed ortholog is 100%.

Group of orthologs #798. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:96

Q5K7E0              	100.00%		C4LWV5              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for C4LWV5 as seed ortholog is 100%.

Group of orthologs #799. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:96

Q5KM41              	100.00%		C4M143              	100.00%
Bootstrap support for Q5KM41 as seed ortholog is 100%.
Bootstrap support for C4M143 as seed ortholog is 100%.

Group of orthologs #800. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:96

Q5KIY8              	100.00%		C4M5J8              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for C4M5J8 as seed ortholog is 100%.

Group of orthologs #801. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 E.histolytica:96

Q5KMU2              	100.00%		C4M6D0              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for C4M6D0 as seed ortholog is 100%.

Group of orthologs #802. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 E.histolytica:95

Q5KPB4              	100.00%		C4M9E1              	100.00%
                    	       		C4M9I2              	21.06%
                    	       		C4LX60              	13.01%
                    	       		C4M5W7              	8.73%
                    	       		C4LY06              	6.68%
Bootstrap support for Q5KPB4 as seed ortholog is 100%.
Bootstrap support for C4M9E1 as seed ortholog is 100%.

Group of orthologs #803. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 E.histolytica:95

Q5KI23              	100.00%		C4M549              	100.00%
                    	       		C4LT49              	98.41%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for C4M549 as seed ortholog is 100%.

Group of orthologs #804. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 E.histolytica:95

Q5K7E8              	100.00%		C4M883              	100.00%
Bootstrap support for Q5K7E8 as seed ortholog is 100%.
Bootstrap support for C4M883 as seed ortholog is 100%.

Group of orthologs #805. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

Q5KEP5              	100.00%		C4M2J1              	100.00%
                    	       		C4M6C8              	11.78%
                    	       		C4LTG8              	10.34%
                    	       		C4MBH3              	7.47%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for C4M2J1 as seed ortholog is 100%.

Group of orthologs #806. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

Q5KAB9              	100.00%		C4M6S2              	100.00%
                    	       		C4M8C9              	99.40%
                    	       		C4LTQ0              	82.63%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for C4M6S2 as seed ortholog is 100%.

Group of orthologs #807. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

P0CP32              	100.00%		B1N4Q4              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for B1N4Q4 as seed ortholog is 100%.

Group of orthologs #808. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

P0CM62              	100.00%		C4M386              	100.00%
Bootstrap support for P0CM62 as seed ortholog is 100%.
Bootstrap support for C4M386 as seed ortholog is 100%.

Group of orthologs #809. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

Q5KAE2              	100.00%		C4M0Z3              	100.00%
Bootstrap support for Q5KAE2 as seed ortholog is 100%.
Bootstrap support for C4M0Z3 as seed ortholog is 100%.

Group of orthologs #810. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

Q5KI04              	100.00%		C4LZN2              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for C4LZN2 as seed ortholog is 100%.

Group of orthologs #811. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 E.histolytica:94

Q5KE84              	100.00%		C4M666              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for C4M666 as seed ortholog is 100%.

Group of orthologs #812. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 E.histolytica:11

Q5KHZ4              	100.00%		C4M322              	100.00%
                    	       		C4M645              	10.22%
Bootstrap support for Q5KHZ4 as seed ortholog is 100%.
Bootstrap support for C4M322 as seed ortholog is 54%.
Alternative seed ortholog is C4LSX7 (11 bits away from this cluster)

Group of orthologs #813. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 E.histolytica:93

Q5KNE0              	100.00%		C4M8A9              	100.00%
                    	       		C4LU13              	87.25%
Bootstrap support for Q5KNE0 as seed ortholog is 100%.
Bootstrap support for C4M8A9 as seed ortholog is 100%.

Group of orthologs #814. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 E.histolytica:93

Q5KL44              	100.00%		C4LVM1              	100.00%
Bootstrap support for Q5KL44 as seed ortholog is 100%.
Bootstrap support for C4LVM1 as seed ortholog is 100%.

Group of orthologs #815. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:92

Q5KEY3              	36.72%		B1N2J0              	100.00%
Q5KBK5              	100.00%		Q9NH04              	100.00%
Q5K758              	17.80%		
Bootstrap support for Q5KBK5 as seed ortholog is 100%.
Bootstrap support for B1N2J0 as seed ortholog is 100%.
Bootstrap support for Q9NH04 as seed ortholog is 100%.

Group of orthologs #816. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:92

Q5K7D5              	100.00%		C4LTU8              	100.00%
Bootstrap support for Q5K7D5 as seed ortholog is 100%.
Bootstrap support for C4LTU8 as seed ortholog is 100%.

Group of orthologs #817. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:92

Q5KB82              	100.00%		C4LUH8              	100.00%
Bootstrap support for Q5KB82 as seed ortholog is 100%.
Bootstrap support for C4LUH8 as seed ortholog is 100%.

Group of orthologs #818. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:92

P0CR54              	100.00%		C4M1A5              	100.00%
Bootstrap support for P0CR54 as seed ortholog is 100%.
Bootstrap support for C4M1A5 as seed ortholog is 100%.

Group of orthologs #819. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:39 E.histolytica:92

Q5KF95              	100.00%		C4LZ58              	100.00%
Bootstrap support for Q5KF95 as seed ortholog is 93%.
Bootstrap support for C4LZ58 as seed ortholog is 100%.

Group of orthologs #820. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:92

Q5KAL7              	100.00%		C4M4Z9              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for C4M4Z9 as seed ortholog is 100%.

Group of orthologs #821. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:31 E.histolytica:92

Q5KQ79              	100.00%		C4M2P2              	100.00%
Bootstrap support for Q5KQ79 as seed ortholog is 76%.
Bootstrap support for C4M2P2 as seed ortholog is 100%.

Group of orthologs #822. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 E.histolytica:92

Q5KKD6              	100.00%		C4M9T8              	100.00%
Bootstrap support for Q5KKD6 as seed ortholog is 100%.
Bootstrap support for C4M9T8 as seed ortholog is 100%.

Group of orthologs #823. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:5

Q5KK55              	100.00%		C4LYR0              	100.00%
                    	       		C4M658              	23.93%
                    	       		C4MBD8              	10.26%
Bootstrap support for Q5KK55 as seed ortholog is 95%.
Bootstrap support for C4LYR0 as seed ortholog is 62%.
Alternative seed ortholog is C4LWD3 (5 bits away from this cluster)

Group of orthologs #824. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:38 E.histolytica:91

Q5K889              	100.00%		C4LT43              	100.00%
                    	       		Q1EQ05              	100.00%
Bootstrap support for Q5K889 as seed ortholog is 95%.
Bootstrap support for C4LT43 as seed ortholog is 100%.
Bootstrap support for Q1EQ05 as seed ortholog is 100%.

Group of orthologs #825. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:91

Q5K9D0              	100.00%		C4LY24              	100.00%
Bootstrap support for Q5K9D0 as seed ortholog is 100%.
Bootstrap support for C4LY24 as seed ortholog is 100%.

Group of orthologs #826. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:91

Q5KMX2              	100.00%		B1N466              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 100%.
Bootstrap support for B1N466 as seed ortholog is 100%.

Group of orthologs #827. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:45 E.histolytica:48

Q5K9S1              	100.00%		C4M851              	100.00%
Bootstrap support for Q5K9S1 as seed ortholog is 95%.
Bootstrap support for C4M851 as seed ortholog is 93%.

Group of orthologs #828. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:91

Q5KIE8              	100.00%		C4M187              	100.00%
Bootstrap support for Q5KIE8 as seed ortholog is 95%.
Bootstrap support for C4M187 as seed ortholog is 100%.

Group of orthologs #829. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:25

Q5KMG9              	100.00%		C4LZ52              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for C4LZ52 as seed ortholog is 81%.

Group of orthologs #830. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:91

Q5KKY4              	100.00%		C4M6C9              	100.00%
Bootstrap support for Q5KKY4 as seed ortholog is 100%.
Bootstrap support for C4M6C9 as seed ortholog is 100%.

Group of orthologs #831. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 E.histolytica:91

Q5KQ40              	100.00%		C4M3Z7              	100.00%
Bootstrap support for Q5KQ40 as seed ortholog is 100%.
Bootstrap support for C4M3Z7 as seed ortholog is 100%.

Group of orthologs #832. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:12 E.histolytica:90

Q5KIG6              	100.00%		C4M554              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 61%.
Alternative seed ortholog is Q5KG24 (12 bits away from this cluster)
Bootstrap support for C4M554 as seed ortholog is 100%.

Group of orthologs #833. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:89

Q5KCX6              	100.00%		Q1EQ09              	100.00%
                    	       		Q1EQ08              	9.04%
                    	       		C4LV39              	5.62%
Bootstrap support for Q5KCX6 as seed ortholog is 94%.
Bootstrap support for Q1EQ09 as seed ortholog is 100%.

Group of orthologs #834. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 E.histolytica:89

P0CM42              	100.00%		C4LW60              	100.00%
Bootstrap support for P0CM42 as seed ortholog is 100%.
Bootstrap support for C4LW60 as seed ortholog is 100%.

Group of orthologs #835. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 E.histolytica:47

Q5K8E1              	100.00%		C4LXR1              	100.00%
Bootstrap support for Q5K8E1 as seed ortholog is 100%.
Bootstrap support for C4LXR1 as seed ortholog is 99%.

Group of orthologs #836. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 E.histolytica:45

Q5KCV8              	100.00%		C4LVA2              	100.00%
Bootstrap support for Q5KCV8 as seed ortholog is 100%.
Bootstrap support for C4LVA2 as seed ortholog is 96%.

Group of orthologs #837. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 E.histolytica:89

Q5KBX4              	100.00%		C4LWY3              	100.00%
Bootstrap support for Q5KBX4 as seed ortholog is 100%.
Bootstrap support for C4LWY3 as seed ortholog is 100%.

Group of orthologs #838. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 E.histolytica:89

Q5KNW9              	100.00%		C4LU91              	100.00%
Bootstrap support for Q5KNW9 as seed ortholog is 100%.
Bootstrap support for C4LU91 as seed ortholog is 100%.

Group of orthologs #839. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:1 E.histolytica:89

Q5KKU0              	100.00%		C4LXD7              	100.00%
Bootstrap support for Q5KKU0 as seed ortholog is 53%.
Alternative seed ortholog is Q5KMW2 (1 bits away from this cluster)
Bootstrap support for C4LXD7 as seed ortholog is 100%.

Group of orthologs #840. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:30 E.histolytica:88

Q5KHT5              	100.00%		C4MAS5              	100.00%
                    	       		C4M583              	21.42%
                    	       		C4M416              	11.68%
Bootstrap support for Q5KHT5 as seed ortholog is 73%.
Alternative seed ortholog is Q5KA75 (30 bits away from this cluster)
Bootstrap support for C4MAS5 as seed ortholog is 100%.

Group of orthologs #841. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 E.histolytica:88

P0CO36              	100.00%		C4LVU3              	100.00%
Bootstrap support for P0CO36 as seed ortholog is 100%.
Bootstrap support for C4LVU3 as seed ortholog is 100%.

Group of orthologs #842. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 E.histolytica:88

Q5KIN8              	100.00%		C4LZY8              	100.00%
Bootstrap support for Q5KIN8 as seed ortholog is 100%.
Bootstrap support for C4LZY8 as seed ortholog is 100%.

Group of orthologs #843. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 E.histolytica:38

Q5KNQ6              	100.00%		C4MB21              	100.00%
Bootstrap support for Q5KNQ6 as seed ortholog is 100%.
Bootstrap support for C4MB21 as seed ortholog is 96%.

Group of orthologs #844. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 E.histolytica:87

Q5KA21              	100.00%		B1N4Q5              	100.00%
Bootstrap support for Q5KA21 as seed ortholog is 100%.
Bootstrap support for B1N4Q5 as seed ortholog is 100%.

Group of orthologs #845. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 E.histolytica:87

Q5KKD1              	100.00%		B1N4F4              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for B1N4F4 as seed ortholog is 100%.

Group of orthologs #846. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 E.histolytica:87

Q5KCT3              	100.00%		C4M3R2              	100.00%
Bootstrap support for Q5KCT3 as seed ortholog is 100%.
Bootstrap support for C4M3R2 as seed ortholog is 100%.

Group of orthologs #847. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 E.histolytica:87

Q5KJU3              	100.00%		C4M067              	100.00%
Bootstrap support for Q5KJU3 as seed ortholog is 100%.
Bootstrap support for C4M067 as seed ortholog is 100%.

Group of orthologs #848. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

P0CP96              	100.00%		C4LTN0              	100.00%
P0CP94              	9.00%		
Bootstrap support for P0CP96 as seed ortholog is 100%.
Bootstrap support for C4LTN0 as seed ortholog is 100%.

Group of orthologs #849. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

P0CO24              	100.00%		C4LYH1              	100.00%
                    	       		C4LTF9              	82.00%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for C4LYH1 as seed ortholog is 100%.

Group of orthologs #850. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

Q5KM51              	100.00%		C4LWC2              	100.00%
                    	       		C4M932              	60.63%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for C4LWC2 as seed ortholog is 100%.

Group of orthologs #851. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

Q5K741              	100.00%		C4M1G0              	100.00%
Bootstrap support for Q5K741 as seed ortholog is 100%.
Bootstrap support for C4M1G0 as seed ortholog is 100%.

Group of orthologs #852. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

P0CN44              	100.00%		C4M4M5              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for C4M4M5 as seed ortholog is 100%.

Group of orthologs #853. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

Q5K7Q2              	100.00%		C4M692              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for C4M692 as seed ortholog is 100%.

Group of orthologs #854. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

Q5KKE8              	100.00%		C4M181              	100.00%
Bootstrap support for Q5KKE8 as seed ortholog is 100%.
Bootstrap support for C4M181 as seed ortholog is 100%.

Group of orthologs #855. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

Q5KEJ8              	100.00%		C4MBA1              	100.00%
Bootstrap support for Q5KEJ8 as seed ortholog is 100%.
Bootstrap support for C4MBA1 as seed ortholog is 100%.

Group of orthologs #856. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:25

Q5KMP9              	100.00%		C4M4P4              	100.00%
Bootstrap support for Q5KMP9 as seed ortholog is 100%.
Bootstrap support for C4M4P4 as seed ortholog is 89%.

Group of orthologs #857. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:86

Q5KLA0              	100.00%		C4MAS2              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for C4MAS2 as seed ortholog is 100%.

Group of orthologs #858. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 E.histolytica:25

Q5KPR1              	100.00%		C4M7F5              	100.00%
Bootstrap support for Q5KPR1 as seed ortholog is 100%.
Bootstrap support for C4M7F5 as seed ortholog is 72%.
Alternative seed ortholog is C4LZ92 (25 bits away from this cluster)

Group of orthologs #859. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 E.histolytica:85

Q5K7T5              	100.00%		C4LSX2              	100.00%
Bootstrap support for Q5K7T5 as seed ortholog is 100%.
Bootstrap support for C4LSX2 as seed ortholog is 100%.

Group of orthologs #860. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 E.histolytica:85

Q5KG76              	100.00%		C4M7L1              	100.00%
Bootstrap support for Q5KG76 as seed ortholog is 100%.
Bootstrap support for C4M7L1 as seed ortholog is 100%.

Group of orthologs #861. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

Q5KGJ7              	100.00%		C4M0B4              	100.00%
                    	       		C4LSK5              	25.66%
Bootstrap support for Q5KGJ7 as seed ortholog is 100%.
Bootstrap support for C4M0B4 as seed ortholog is 100%.

Group of orthologs #862. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

P0CM44              	100.00%		Q9U7F6              	100.00%
                    	       		C4M203              	5.39%
Bootstrap support for P0CM44 as seed ortholog is 100%.
Bootstrap support for Q9U7F6 as seed ortholog is 100%.

Group of orthologs #863. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:40 E.histolytica:84

Q5KPN8              	100.00%		Q7Z0T4              	100.00%
                    	       		Q1EPY7              	5.57%
Bootstrap support for Q5KPN8 as seed ortholog is 91%.
Bootstrap support for Q7Z0T4 as seed ortholog is 100%.

Group of orthologs #864. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

P0CQ30              	100.00%		C4LWM2              	100.00%
Bootstrap support for P0CQ30 as seed ortholog is 100%.
Bootstrap support for C4LWM2 as seed ortholog is 100%.

Group of orthologs #865. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

Q5KB73              	100.00%		C4LT51              	100.00%
Bootstrap support for Q5KB73 as seed ortholog is 100%.
Bootstrap support for C4LT51 as seed ortholog is 100%.

Group of orthologs #866. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

Q5KLA4              	100.00%		C4LYI2              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for C4LYI2 as seed ortholog is 100%.

Group of orthologs #867. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

Q5KB01              	100.00%		C4M928              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for C4M928 as seed ortholog is 100%.

Group of orthologs #868. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

Q5KL85              	100.00%		C4M1C8              	100.00%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for C4M1C8 as seed ortholog is 100%.

Group of orthologs #869. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 E.histolytica:84

Q5KIE7              	100.00%		C4M6H8              	100.00%
Bootstrap support for Q5KIE7 as seed ortholog is 100%.
Bootstrap support for C4M6H8 as seed ortholog is 100%.

Group of orthologs #870. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 E.histolytica:83

Q5KJ89              	100.00%		C4M6G1              	100.00%
                    	       		C4M2L5              	39.29%
Bootstrap support for Q5KJ89 as seed ortholog is 100%.
Bootstrap support for C4M6G1 as seed ortholog is 100%.

Group of orthologs #871. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:36 E.histolytica:83

Q5KKE2              	100.00%		C4LS93              	100.00%
Bootstrap support for Q5KKE2 as seed ortholog is 75%.
Bootstrap support for C4LS93 as seed ortholog is 100%.

Group of orthologs #872. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 E.histolytica:83

Q5KCE5              	100.00%		C4M103              	100.00%
Bootstrap support for Q5KCE5 as seed ortholog is 100%.
Bootstrap support for C4M103 as seed ortholog is 100%.

Group of orthologs #873. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 E.histolytica:83

Q5KP45              	100.00%		C4LX37              	100.00%
Bootstrap support for Q5KP45 as seed ortholog is 100%.
Bootstrap support for C4LX37 as seed ortholog is 100%.

Group of orthologs #874. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5KF15              	100.00%		C4MA89              	100.00%
                    	       		C4LU20              	21.98%
                    	       		C4M9Y5              	20.64%
                    	       		C4M4E9              	17.87%
                    	       		C4LSE2              	14.85%
                    	       		C4LU00              	14.60%
                    	       		C4M5I0              	14.51%
                    	       		C4M038              	12.92%
                    	       		C4M5V1              	10.82%
                    	       		C4M0U5              	8.89%
                    	       		C4LXW5              	6.88%
                    	       		C4LVE9              	5.62%
Bootstrap support for Q5KF15 as seed ortholog is 100%.
Bootstrap support for C4MA89 as seed ortholog is 100%.

Group of orthologs #875. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:26

Q5KP93              	100.00%		C4M3Y3              	100.00%
                    	       		C4M7P5              	13.25%
                    	       		C4M6D9              	10.67%
                    	       		C4M2F6              	7.40%
Bootstrap support for Q5KP93 as seed ortholog is 100%.
Bootstrap support for C4M3Y3 as seed ortholog is 82%.

Group of orthologs #876. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5K6U4              	100.00%		C4M387              	100.00%
                    	       		C4M326              	62.89%
Bootstrap support for Q5K6U4 as seed ortholog is 100%.
Bootstrap support for C4M387 as seed ortholog is 100%.

Group of orthologs #877. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5KMQ6              	100.00%		C4LVU0              	100.00%
                    	       		C4LSH2              	51.93%
Bootstrap support for Q5KMQ6 as seed ortholog is 100%.
Bootstrap support for C4LVU0 as seed ortholog is 100%.

Group of orthologs #878. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5KF11              	100.00%		C4M2C5              	100.00%
Bootstrap support for Q5KF11 as seed ortholog is 100%.
Bootstrap support for C4M2C5 as seed ortholog is 100%.

Group of orthologs #879. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5KGH4              	100.00%		C4M906              	100.00%
Bootstrap support for Q5KGH4 as seed ortholog is 100%.
Bootstrap support for C4M906 as seed ortholog is 100%.

Group of orthologs #880. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5KIG4              	100.00%		C4M8F6              	100.00%
Bootstrap support for Q5KIG4 as seed ortholog is 100%.
Bootstrap support for C4M8F6 as seed ortholog is 100%.

Group of orthologs #881. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 E.histolytica:82

Q5KQ41              	100.00%		Q1EQ42              	100.00%
Bootstrap support for Q5KQ41 as seed ortholog is 100%.
Bootstrap support for Q1EQ42 as seed ortholog is 100%.

Group of orthologs #882. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:25 E.histolytica:81

Q5KFS9              	100.00%		C4LVU2              	100.00%
                    	       		C4M853              	41.05%
                    	       		C4M8Q6              	29.63%
                    	       		C4M161              	11.27%
                    	       		B1N5T2              	7.25%
Bootstrap support for Q5KFS9 as seed ortholog is 64%.
Alternative seed ortholog is Q5KMB2 (25 bits away from this cluster)
Bootstrap support for C4LVU2 as seed ortholog is 100%.

Group of orthologs #883. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:81

Q5KDR0              	100.00%		Q86S07              	100.00%
Q5KDL9              	41.54%		C4LSV1              	40.72%
                    	       		Q86S08              	40.03%
Bootstrap support for Q5KDR0 as seed ortholog is 100%.
Bootstrap support for Q86S07 as seed ortholog is 100%.

Group of orthologs #884. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:81

Q5KGY5              	100.00%		C4LY50              	100.00%
                    	       		C4M9F4              	98.95%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for C4LY50 as seed ortholog is 100%.

Group of orthologs #885. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:81

Q5KFF0              	100.00%		C4LSR3              	100.00%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for C4LSR3 as seed ortholog is 100%.

Group of orthologs #886. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:81

Q5KKX2              	100.00%		C4M457              	100.00%
Bootstrap support for Q5KKX2 as seed ortholog is 100%.
Bootstrap support for C4M457 as seed ortholog is 100%.

Group of orthologs #887. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 E.histolytica:81

Q5KDT0              	100.00%		Q1EQ40              	100.00%
Bootstrap support for Q5KDT0 as seed ortholog is 100%.
Bootstrap support for Q1EQ40 as seed ortholog is 100%.

Group of orthologs #888. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 E.histolytica:80

Q5K7Z6              	100.00%		Q4EW66              	100.00%
                    	       		C4M0I7              	19.14%
Bootstrap support for Q5K7Z6 as seed ortholog is 100%.
Bootstrap support for Q4EW66 as seed ortholog is 100%.

Group of orthologs #889. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 E.histolytica:80

Q5KAZ2              	100.00%		C4MAP1              	100.00%
                    	       		C4LZ48              	6.07%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for C4MAP1 as seed ortholog is 100%.

Group of orthologs #890. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 E.histolytica:80

P0CS74              	100.00%		C4M450              	100.00%
Bootstrap support for P0CS74 as seed ortholog is 100%.
Bootstrap support for C4M450 as seed ortholog is 100%.

Group of orthologs #891. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 E.histolytica:80

Q5KNF3              	100.00%		C4LSS7              	100.00%
Bootstrap support for Q5KNF3 as seed ortholog is 100%.
Bootstrap support for C4LSS7 as seed ortholog is 100%.

Group of orthologs #892. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 E.histolytica:80

Q5KDV9              	100.00%		C4M6L6              	100.00%
Bootstrap support for Q5KDV9 as seed ortholog is 100%.
Bootstrap support for C4M6L6 as seed ortholog is 100%.

Group of orthologs #893. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:23 E.histolytica:79

Q5KEQ4              	100.00%		C4LX12              	100.00%
Q5K9K6              	13.56%		C4LVH4              	21.78%
                    	       		Q24823              	13.70%
                    	       		C4M453              	6.03%
Bootstrap support for Q5KEQ4 as seed ortholog is 69%.
Alternative seed ortholog is Q5KPY0 (23 bits away from this cluster)
Bootstrap support for C4LX12 as seed ortholog is 100%.

Group of orthologs #894. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 E.histolytica:79

Q5KDX8              	100.00%		C4M0M2              	100.00%
Q5KCA3              	41.84%		C4LXZ5              	46.00%
Bootstrap support for Q5KDX8 as seed ortholog is 100%.
Bootstrap support for C4M0M2 as seed ortholog is 100%.

Group of orthologs #895. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 E.histolytica:79

Q5KMM9              	100.00%		C4M3L2              	100.00%
Bootstrap support for Q5KMM9 as seed ortholog is 100%.
Bootstrap support for C4M3L2 as seed ortholog is 100%.

Group of orthologs #896. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 E.histolytica:79

Q5KN18              	100.00%		C4MB22              	100.00%
Bootstrap support for Q5KN18 as seed ortholog is 100%.
Bootstrap support for C4MB22 as seed ortholog is 100%.

Group of orthologs #897. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 E.histolytica:78

Q5KEN0              	100.00%		C4LVW1              	100.00%
Q5K861              	45.58%		
Q5KD31              	44.96%		
Q5KD32              	40.16%		
Q5K862              	40.16%		
Q5KJE2              	37.21%		
Q5KH90              	26.98%		
Bootstrap support for Q5KEN0 as seed ortholog is 100%.
Bootstrap support for C4LVW1 as seed ortholog is 100%.

Group of orthologs #898. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 E.histolytica:78

Q5KHJ3              	100.00%		C4LZQ8              	100.00%
                    	       		C4M059              	94.83%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for C4LZQ8 as seed ortholog is 100%.

Group of orthologs #899. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 E.histolytica:78

Q5KJN0              	100.00%		C4M491              	100.00%
Bootstrap support for Q5KJN0 as seed ortholog is 100%.
Bootstrap support for C4M491 as seed ortholog is 100%.

Group of orthologs #900. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:77

Q5K7Y4              	100.00%		C4LYM6              	100.00%
Q5KGQ0              	7.10%		
Bootstrap support for Q5K7Y4 as seed ortholog is 100%.
Bootstrap support for C4LYM6 as seed ortholog is 100%.

Group of orthologs #901. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:35

Q5KER1              	100.00%		B1N3B2              	100.00%
Bootstrap support for Q5KER1 as seed ortholog is 100%.
Bootstrap support for B1N3B2 as seed ortholog is 87%.

Group of orthologs #902. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:77

Q5KAI3              	100.00%		C4LTV3              	100.00%
Bootstrap support for Q5KAI3 as seed ortholog is 100%.
Bootstrap support for C4LTV3 as seed ortholog is 100%.

Group of orthologs #903. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:77

Q5K9C9              	100.00%		C4LXT1              	100.00%
Bootstrap support for Q5K9C9 as seed ortholog is 100%.
Bootstrap support for C4LXT1 as seed ortholog is 100%.

Group of orthologs #904. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:77

Q5KL57              	100.00%		C4LV80              	100.00%
Bootstrap support for Q5KL57 as seed ortholog is 100%.
Bootstrap support for C4LV80 as seed ortholog is 100%.

Group of orthologs #905. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:77

Q5KL67              	100.00%		C4M0W5              	100.00%
Bootstrap support for Q5KL67 as seed ortholog is 100%.
Bootstrap support for C4M0W5 as seed ortholog is 100%.

Group of orthologs #906. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 E.histolytica:77

Q5KMS2              	100.00%		C4M5M4              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for C4M5M4 as seed ortholog is 100%.

Group of orthologs #907. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:76

Q5KBU2              	100.00%		C4LT28              	100.00%
                    	       		C4LSS1              	30.02%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for C4LT28 as seed ortholog is 100%.

Group of orthologs #908. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:76

Q5KLV3              	100.00%		C4LUK9              	100.00%
                    	       		C4M1I7              	9.72%
Bootstrap support for Q5KLV3 as seed ortholog is 100%.
Bootstrap support for C4LUK9 as seed ortholog is 100%.

Group of orthologs #909. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:76

Q5KK70              	100.00%		C4LWC7              	100.00%
                    	       		C4MB67              	19.75%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for C4LWC7 as seed ortholog is 100%.

Group of orthologs #910. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:17

Q5KLI8              	100.00%		C4LV48              	100.00%
                    	       		C4M6Y8              	26.18%
Bootstrap support for Q5KLI8 as seed ortholog is 100%.
Bootstrap support for C4LV48 as seed ortholog is 94%.

Group of orthologs #911. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:76

P0CL96              	100.00%		C4M259              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 100%.
Bootstrap support for C4M259 as seed ortholog is 100%.

Group of orthologs #912. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:76

P0CP06              	100.00%		C4M758              	100.00%
Bootstrap support for P0CP06 as seed ortholog is 100%.
Bootstrap support for C4M758 as seed ortholog is 100%.

Group of orthologs #913. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 E.histolytica:9

Q5K766              	100.00%		C4M7Y6              	100.00%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for C4M7Y6 as seed ortholog is 60%.
Alternative seed ortholog is C4LXY8 (9 bits away from this cluster)

Group of orthologs #914. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:5 E.histolytica:75

Q5KCK6              	100.00%		C4M8I4              	100.00%
                    	       		C4MAI0              	20.31%
                    	       		C4MAD3              	17.21%
                    	       		B1N2V5              	14.12%
                    	       		C4MB56              	13.93%
                    	       		C4LYH5              	11.99%
Bootstrap support for Q5KCK6 as seed ortholog is 56%.
Alternative seed ortholog is Q5KKM7 (5 bits away from this cluster)
Bootstrap support for C4M8I4 as seed ortholog is 100%.

Group of orthologs #915. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 E.histolytica:75

Q5KMA4              	100.00%		C4M0A8              	100.00%
                    	       		C4M8B5              	44.06%
Bootstrap support for Q5KMA4 as seed ortholog is 100%.
Bootstrap support for C4M0A8 as seed ortholog is 100%.

Group of orthologs #916. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 E.histolytica:75

Q5KMR3              	100.00%		B1N2R6              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for B1N2R6 as seed ortholog is 100%.

Group of orthologs #917. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 E.histolytica:75

Q5KMD5              	100.00%		C4LSG7              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for C4LSG7 as seed ortholog is 100%.

Group of orthologs #918. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 E.histolytica:74

Q5K7E1              	100.00%		C4LY94              	100.00%
                    	       		C4M149              	6.03%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for C4LY94 as seed ortholog is 100%.

Group of orthologs #919. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 E.histolytica:74

Q5K7I7              	100.00%		C4LYW6              	100.00%
Bootstrap support for Q5K7I7 as seed ortholog is 100%.
Bootstrap support for C4LYW6 as seed ortholog is 100%.

Group of orthologs #920. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 E.histolytica:74

Q5K8X7              	100.00%		C4M924              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for C4M924 as seed ortholog is 100%.

Group of orthologs #921. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 E.histolytica:73

Q5KNI7              	100.00%		C4M661              	100.00%
                    	       		C4LZ75              	67.35%
                    	       		C4M660              	27.89%
Bootstrap support for Q5KNI7 as seed ortholog is 100%.
Bootstrap support for C4M661 as seed ortholog is 100%.

Group of orthologs #922. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 E.histolytica:73

Q5KD43              	100.00%		C4M822              	100.00%
Bootstrap support for Q5KD43 as seed ortholog is 100%.
Bootstrap support for C4M822 as seed ortholog is 100%.

Group of orthologs #923. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 E.histolytica:72

Q5KBD5              	100.00%		C4LW37              	100.00%
Bootstrap support for Q5KBD5 as seed ortholog is 100%.
Bootstrap support for C4LW37 as seed ortholog is 100%.

Group of orthologs #924. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 E.histolytica:72

P0CR76              	100.00%		C4M1T3              	100.00%
Bootstrap support for P0CR76 as seed ortholog is 100%.
Bootstrap support for C4M1T3 as seed ortholog is 100%.

Group of orthologs #925. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 E.histolytica:72

Q5KNT2              	100.00%		B1N3A8              	100.00%
Bootstrap support for Q5KNT2 as seed ortholog is 100%.
Bootstrap support for B1N3A8 as seed ortholog is 100%.

Group of orthologs #926. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 E.histolytica:72

Q5KAA6              	100.00%		C4M5M8              	100.00%
Bootstrap support for Q5KAA6 as seed ortholog is 100%.
Bootstrap support for C4M5M8 as seed ortholog is 100%.

Group of orthologs #927. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 E.histolytica:72

Q5KKR7              	100.00%		C4M573              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for C4M573 as seed ortholog is 100%.

Group of orthologs #928. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 E.histolytica:71

Q5KE72              	100.00%		C4LSD6              	100.00%
                    	       		C4MA32              	14.25%
                    	       		C4M0S2              	7.78%
                    	       		C4M099              	7.43%
                    	       		C4LUB7              	5.63%
Bootstrap support for Q5KE72 as seed ortholog is 100%.
Bootstrap support for C4LSD6 as seed ortholog is 100%.

Group of orthologs #929. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 E.histolytica:27

Q5KK99              	100.00%		C4M574              	100.00%
                    	       		C4LVN9              	95.38%
                    	       		C4LSC4              	73.33%
Bootstrap support for Q5KK99 as seed ortholog is 100%.
Bootstrap support for C4M574 as seed ortholog is 88%.

Group of orthologs #930. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 E.histolytica:71

Q5KLY6              	100.00%		C4LSE7              	100.00%
                    	       		C4LVM2              	99.61%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for C4LSE7 as seed ortholog is 100%.

Group of orthologs #931. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 E.histolytica:71

Q5K8W2              	100.00%		C4M4C7              	100.00%
Bootstrap support for Q5K8W2 as seed ortholog is 100%.
Bootstrap support for C4M4C7 as seed ortholog is 100%.

Group of orthologs #932. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 E.histolytica:71

P0CO30              	100.00%		C4MB90              	100.00%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for C4MB90 as seed ortholog is 100%.

Group of orthologs #933. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 E.histolytica:71

Q5KLG3              	100.00%		C4M9X9              	100.00%
Bootstrap support for Q5KLG3 as seed ortholog is 100%.
Bootstrap support for C4M9X9 as seed ortholog is 100%.

Group of orthologs #934. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 E.histolytica:70

Q5KK68              	100.00%		C4LTQ9              	100.00%
                    	       		B1N2H3              	62.70%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for C4LTQ9 as seed ortholog is 100%.

Group of orthologs #935. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 E.histolytica:70

Q5KBM9              	100.00%		B1N2G1              	100.00%
Bootstrap support for Q5KBM9 as seed ortholog is 100%.
Bootstrap support for B1N2G1 as seed ortholog is 100%.

Group of orthologs #936. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 E.histolytica:70

Q5KP48              	100.00%		C4M0Z6              	100.00%
Bootstrap support for Q5KP48 as seed ortholog is 100%.
Bootstrap support for C4M0Z6 as seed ortholog is 100%.

Group of orthologs #937. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KG85              	100.00%		C4LXF4              	100.00%
Q5KG86              	100.00%		C4M4K0              	100.00%
                    	       		C4M4U4              	37.92%
Bootstrap support for Q5KG85 as seed ortholog is 100%.
Bootstrap support for Q5KG86 as seed ortholog is 100%.
Bootstrap support for C4LXF4 as seed ortholog is 100%.
Bootstrap support for C4M4K0 as seed ortholog is 100%.

Group of orthologs #938. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KAJ6              	100.00%		C4M7V5              	100.00%
                    	       		C4LYH0              	6.36%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for C4M7V5 as seed ortholog is 100%.

Group of orthologs #939. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KLQ6              	100.00%		C4M0U9              	100.00%
                    	       		C4M7U4              	25.27%
Bootstrap support for Q5KLQ6 as seed ortholog is 100%.
Bootstrap support for C4M0U9 as seed ortholog is 100%.

Group of orthologs #940. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KKH5              	100.00%		C4LT84              	100.00%
Bootstrap support for Q5KKH5 as seed ortholog is 100%.
Bootstrap support for C4LT84 as seed ortholog is 100%.

Group of orthologs #941. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KHN0              	100.00%		C4LW40              	100.00%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for C4LW40 as seed ortholog is 100%.

Group of orthologs #942. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KHA7              	100.00%		C4LXF8              	100.00%
Bootstrap support for Q5KHA7 as seed ortholog is 100%.
Bootstrap support for C4LXF8 as seed ortholog is 100%.

Group of orthologs #943. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KIE5              	100.00%		C4LYL4              	100.00%
Bootstrap support for Q5KIE5 as seed ortholog is 100%.
Bootstrap support for C4LYL4 as seed ortholog is 100%.

Group of orthologs #944. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KH61              	100.00%		C4M0J3              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for C4M0J3 as seed ortholog is 100%.

Group of orthologs #945. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 E.histolytica:69

Q5KLD3              	100.00%		C4M5L6              	100.00%
Bootstrap support for Q5KLD3 as seed ortholog is 100%.
Bootstrap support for C4M5L6 as seed ortholog is 100%.

Group of orthologs #946. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 E.histolytica:68

Q5KMB4              	100.00%		C4LXS9              	100.00%
Bootstrap support for Q5KMB4 as seed ortholog is 100%.
Bootstrap support for C4LXS9 as seed ortholog is 100%.

Group of orthologs #947. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 E.histolytica:68

Q5KF90              	100.00%		C4M7T5              	100.00%
Bootstrap support for Q5KF90 as seed ortholog is 100%.
Bootstrap support for C4M7T5 as seed ortholog is 100%.

Group of orthologs #948. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 E.histolytica:68

Q5KMC3              	100.00%		C4M7M7              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for C4M7M7 as seed ortholog is 100%.

Group of orthologs #949. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5K7T2              	100.00%		C4LXK0              	100.00%
Q5K7U1              	34.93%		C4M4C6              	5.67%
Q5KKM9              	27.63%		
Q5KF40              	20.09%		
Bootstrap support for Q5K7T2 as seed ortholog is 100%.
Bootstrap support for C4LXK0 as seed ortholog is 100%.

Group of orthologs #950. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:23

Q5K7G5              	100.00%		C4M962              	100.00%
                    	       		C4M5N7              	40.22%
                    	       		C4LYZ5              	37.18%
                    	       		C4M8T6              	32.20%
                    	       		C4LVV3              	8.51%
Bootstrap support for Q5K7G5 as seed ortholog is 100%.
Bootstrap support for C4M962 as seed ortholog is 70%.
Alternative seed ortholog is C4M0T9 (23 bits away from this cluster)

Group of orthologs #951. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5KEC3              	100.00%		C4M2T1              	100.00%
                    	       		Q7YZC1              	100.00%
                    	       		B1N3I5              	47.95%
Bootstrap support for Q5KEC3 as seed ortholog is 100%.
Bootstrap support for C4M2T1 as seed ortholog is 100%.
Bootstrap support for Q7YZC1 as seed ortholog is 100%.

Group of orthologs #952. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5KIP7              	100.00%		B1N449              	100.00%
                    	       		C4LTH7              	17.16%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for B1N449 as seed ortholog is 100%.

Group of orthologs #953. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5KGR6              	100.00%		C4LZ47              	100.00%
Q5KAX0              	34.01%		
Bootstrap support for Q5KGR6 as seed ortholog is 100%.
Bootstrap support for C4LZ47 as seed ortholog is 100%.

Group of orthologs #954. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5K788              	100.00%		C4M1Q2              	100.00%
Bootstrap support for Q5K788 as seed ortholog is 100%.
Bootstrap support for C4M1Q2 as seed ortholog is 100%.

Group of orthologs #955. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5K9G6              	100.00%		C4M029              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for C4M029 as seed ortholog is 100%.

Group of orthologs #956. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5KKT8              	100.00%		C4LSB8              	100.00%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for C4LSB8 as seed ortholog is 100%.

Group of orthologs #957. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5KI51              	100.00%		C4LWW3              	100.00%
Bootstrap support for Q5KI51 as seed ortholog is 100%.
Bootstrap support for C4LWW3 as seed ortholog is 100%.

Group of orthologs #958. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:67

Q5KN63              	100.00%		C4LSH4              	100.00%
Bootstrap support for Q5KN63 as seed ortholog is 100%.
Bootstrap support for C4LSH4 as seed ortholog is 100%.

Group of orthologs #959. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 E.histolytica:15

Q5KGS8              	100.00%		C4LZG2              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for C4LZG2 as seed ortholog is 63%.
Alternative seed ortholog is C4M2I2 (15 bits away from this cluster)

Group of orthologs #960. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 E.histolytica:66

Q5KKQ1              	100.00%		C4M9S4              	100.00%
                    	       		C4LZT6              	12.08%
Bootstrap support for Q5KKQ1 as seed ortholog is 100%.
Bootstrap support for C4M9S4 as seed ortholog is 100%.

Group of orthologs #961. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 E.histolytica:66

Q5KHQ2              	100.00%		C4LTA2              	100.00%
Bootstrap support for Q5KHQ2 as seed ortholog is 100%.
Bootstrap support for C4LTA2 as seed ortholog is 100%.

Group of orthologs #962. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 E.histolytica:66

Q5KK46              	100.00%		C4LW10              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for C4LW10 as seed ortholog is 100%.

Group of orthologs #963. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 E.histolytica:65

P0CR20              	100.00%		C4LYD5              	100.00%
Bootstrap support for P0CR20 as seed ortholog is 100%.
Bootstrap support for C4LYD5 as seed ortholog is 100%.

Group of orthologs #964. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 E.histolytica:65

Q5KF78              	100.00%		C4LXI0              	100.00%
Bootstrap support for Q5KF78 as seed ortholog is 100%.
Bootstrap support for C4LXI0 as seed ortholog is 100%.

Group of orthologs #965. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:11

Q5KBI3              	100.00%		C4MB10              	100.00%
                    	       		C4M176              	25.16%
Bootstrap support for Q5KBI3 as seed ortholog is 100%.
Bootstrap support for C4MB10 as seed ortholog is 70%.
Alternative seed ortholog is C4LZB5 (11 bits away from this cluster)

Group of orthologs #966. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:64

P0CO86              	100.00%		C4LTY4              	100.00%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for C4LTY4 as seed ortholog is 100%.

Group of orthologs #967. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:64

P0CR80              	100.00%		C4LZZ9              	100.00%
Bootstrap support for P0CR80 as seed ortholog is 100%.
Bootstrap support for C4LZZ9 as seed ortholog is 100%.

Group of orthologs #968. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:64

Q5KG27              	100.00%		C4LSV6              	100.00%
Bootstrap support for Q5KG27 as seed ortholog is 100%.
Bootstrap support for C4LSV6 as seed ortholog is 100%.

Group of orthologs #969. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:64

Q5KFI3              	100.00%		C4LVC0              	100.00%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for C4LVC0 as seed ortholog is 100%.

Group of orthologs #970. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 E.histolytica:64

Q5KLI5              	100.00%		C4M870              	100.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for C4M870 as seed ortholog is 100%.

Group of orthologs #971. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 E.histolytica:63

Q5K924              	100.00%		C4M7Y8              	100.00%
Q5KPY6              	31.04%		C4LSA2              	87.76%
Q5KGI6              	25.11%		B1N2E0              	86.51%
Q5K993              	19.97%		B1N605              	38.21%
Bootstrap support for Q5K924 as seed ortholog is 100%.
Bootstrap support for C4M7Y8 as seed ortholog is 100%.

Group of orthologs #972. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 E.histolytica:63

Q5KCA2              	100.00%		C4M8I3              	100.00%
Bootstrap support for Q5KCA2 as seed ortholog is 100%.
Bootstrap support for C4M8I3 as seed ortholog is 100%.

Group of orthologs #973. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 E.histolytica:63

Q5KGK8              	100.00%		C4M4Q8              	100.00%
Bootstrap support for Q5KGK8 as seed ortholog is 100%.
Bootstrap support for C4M4Q8 as seed ortholog is 100%.

Group of orthologs #974. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:62

Q5K7N1              	100.00%		C4LVP8              	100.00%
Q5KMW9              	13.40%		C4LXM1              	5.03%
Q5KKK7              	13.40%		
Q5KBZ5              	8.53%		
Bootstrap support for Q5K7N1 as seed ortholog is 100%.
Bootstrap support for C4LVP8 as seed ortholog is 100%.

Group of orthologs #975. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:6

Q5KQ97              	100.00%		C4M1S5              	100.00%
Q5KDF9              	27.63%		C4M1S6              	96.12%
                    	       		C4LZ72              	8.59%
                    	       		C4LU44              	7.53%
Bootstrap support for Q5KQ97 as seed ortholog is 100%.
Bootstrap support for C4M1S5 as seed ortholog is 73%.
Alternative seed ortholog is C4M3G1 (6 bits away from this cluster)

Group of orthologs #976. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:62

Q5K7U9              	100.00%		C4MA90              	100.00%
                    	       		C4M512              	23.48%
                    	       		C4M8S6              	16.27%
Bootstrap support for Q5K7U9 as seed ortholog is 100%.
Bootstrap support for C4MA90 as seed ortholog is 100%.

Group of orthologs #977. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:62

Q5K7C8              	100.00%		B1N4J9              	100.00%
Bootstrap support for Q5K7C8 as seed ortholog is 100%.
Bootstrap support for B1N4J9 as seed ortholog is 100%.

Group of orthologs #978. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 E.histolytica:62

Q5KNQ0              	100.00%		C4MB48              	100.00%
Bootstrap support for Q5KNQ0 as seed ortholog is 100%.
Bootstrap support for C4MB48 as seed ortholog is 100%.

Group of orthologs #979. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 E.histolytica:61

Q5KD71              	100.00%		B1N2W5              	100.00%
                    	       		Q1EPZ0              	58.93%
                    	       		Q1EPY9              	18.30%
                    	       		Q1EPY8              	11.61%
Bootstrap support for Q5KD71 as seed ortholog is 100%.
Bootstrap support for B1N2W5 as seed ortholog is 100%.

Group of orthologs #980. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:14 E.histolytica:61

Q5KMX1              	100.00%		C4MBB9              	100.00%
                    	       		C4MAV3              	98.44%
                    	       		B1N423              	97.77%
Bootstrap support for Q5KMX1 as seed ortholog is 63%.
Alternative seed ortholog is Q5K8Y0 (14 bits away from this cluster)
Bootstrap support for C4MBB9 as seed ortholog is 100%.

Group of orthologs #981. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 E.histolytica:61

Q5K904              	100.00%		C4LS92              	100.00%
Bootstrap support for Q5K904 as seed ortholog is 100%.
Bootstrap support for C4LS92 as seed ortholog is 100%.

Group of orthologs #982. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 E.histolytica:61

Q5KCJ7              	100.00%		C4LWU3              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for C4LWU3 as seed ortholog is 100%.

Group of orthologs #983. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 E.histolytica:61

Q5KND7              	100.00%		C4M5C4              	100.00%
Bootstrap support for Q5KND7 as seed ortholog is 100%.
Bootstrap support for C4M5C4 as seed ortholog is 100%.

Group of orthologs #984. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 E.histolytica:60

Q5KJ00              	100.00%		C4M5B2              	100.00%
Bootstrap support for Q5KJ00 as seed ortholog is 100%.
Bootstrap support for C4M5B2 as seed ortholog is 100%.

Group of orthologs #985. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 E.histolytica:60

Q5KMH2              	100.00%		C4M3M0              	100.00%
Bootstrap support for Q5KMH2 as seed ortholog is 100%.
Bootstrap support for C4M3M0 as seed ortholog is 100%.

Group of orthologs #986. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 E.histolytica:60

Q5KHV8              	100.00%		Q1EQ41              	100.00%
Bootstrap support for Q5KHV8 as seed ortholog is 100%.
Bootstrap support for Q1EQ41 as seed ortholog is 100%.

Group of orthologs #987. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 E.histolytica:60

Q5KK93              	100.00%		C4MB02              	100.00%
Bootstrap support for Q5KK93 as seed ortholog is 100%.
Bootstrap support for C4MB02 as seed ortholog is 100%.

Group of orthologs #988. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 E.histolytica:59

Q5KM63              	100.00%		C4M793              	100.00%
                    	       		C4MA88              	36.21%
                    	       		C4LTE6              	31.23%
                    	       		C4M8Y5              	22.03%
Bootstrap support for Q5KM63 as seed ortholog is 100%.
Bootstrap support for C4M793 as seed ortholog is 100%.

Group of orthologs #989. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 E.histolytica:59

P0CO54              	100.00%		C4LXE4              	100.00%
                    	       		C4MAE2              	93.94%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for C4LXE4 as seed ortholog is 100%.

Group of orthologs #990. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 E.histolytica:59

P0CM94              	100.00%		C4M650              	100.00%
Bootstrap support for P0CM94 as seed ortholog is 100%.
Bootstrap support for C4M650 as seed ortholog is 100%.

Group of orthologs #991. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 E.histolytica:59

Q5KHZ6              	100.00%		C4LXI3              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for C4LXI3 as seed ortholog is 100%.

Group of orthologs #992. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 E.histolytica:59

Q5KL91              	100.00%		C4M3F5              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for C4M3F5 as seed ortholog is 100%.

Group of orthologs #993. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:58

P0CN72              	100.00%		Q1EQ43              	100.00%
                    	       		C4LZG8              	24.65%
Bootstrap support for P0CN72 as seed ortholog is 100%.
Bootstrap support for Q1EQ43 as seed ortholog is 100%.

Group of orthologs #994. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:58

Q5KG59              	100.00%		C4M6F5              	100.00%
                    	       		B1N522              	5.25%
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for C4M6F5 as seed ortholog is 100%.

Group of orthologs #995. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:16

P0CS18              	100.00%		C4LUX6              	100.00%
Bootstrap support for P0CS18 as seed ortholog is 100%.
Bootstrap support for C4LUX6 as seed ortholog is 86%.

Group of orthologs #996. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:10 E.histolytica:58

Q5KA20              	100.00%		C4M4I4              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 71%.
Alternative seed ortholog is Q5K900 (10 bits away from this cluster)
Bootstrap support for C4M4I4 as seed ortholog is 100%.

Group of orthologs #997. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:58

Q5KP16              	100.00%		C4LVM0              	100.00%
Bootstrap support for Q5KP16 as seed ortholog is 100%.
Bootstrap support for C4LVM0 as seed ortholog is 100%.

Group of orthologs #998. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 E.histolytica:58

Q5KNX9              	100.00%		C4M8V6              	100.00%
Bootstrap support for Q5KNX9 as seed ortholog is 100%.
Bootstrap support for C4M8V6 as seed ortholog is 100%.

Group of orthologs #999. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5KEW1              	100.00%		C4M8W3              	100.00%
Q5KBN1              	29.23%		C4M346              	26.29%
                    	       		C4LU25              	26.15%
Bootstrap support for Q5KEW1 as seed ortholog is 100%.
Bootstrap support for C4M8W3 as seed ortholog is 100%.

Group of orthologs #1000. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5KJ78              	100.00%		C4MBG1              	100.00%
Q5KE36              	16.84%		C4LSV9              	40.60%
Q5KE37              	16.40%		
Bootstrap support for Q5KJ78 as seed ortholog is 100%.
Bootstrap support for C4MBG1 as seed ortholog is 100%.

Group of orthologs #1001. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5K9Q9              	100.00%		C4M8M2              	100.00%
                    	       		B1N445              	48.04%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for C4M8M2 as seed ortholog is 100%.

Group of orthologs #1002. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5KGA0              	100.00%		C4M1D5              	100.00%
Bootstrap support for Q5KGA0 as seed ortholog is 100%.
Bootstrap support for C4M1D5 as seed ortholog is 100%.

Group of orthologs #1003. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5K6V6              	100.00%		C4MAP6              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for C4MAP6 as seed ortholog is 100%.

Group of orthologs #1004. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5KFR7              	100.00%		C4M5P9              	100.00%
Bootstrap support for Q5KFR7 as seed ortholog is 100%.
Bootstrap support for C4M5P9 as seed ortholog is 100%.

Group of orthologs #1005. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 E.histolytica:57

Q5KNS3              	100.00%		C4M9N2              	100.00%
Bootstrap support for Q5KNS3 as seed ortholog is 100%.
Bootstrap support for C4M9N2 as seed ortholog is 100%.

Group of orthologs #1006. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 E.histolytica:56

Q5KL55              	100.00%		C4LSA3              	100.00%
                    	       		B1N2E1              	67.54%
Bootstrap support for Q5KL55 as seed ortholog is 100%.
Bootstrap support for C4LSA3 as seed ortholog is 100%.

Group of orthologs #1007. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 E.histolytica:56

Q5KIV8              	100.00%		Q1EPZ9              	100.00%
                    	       		Q1EPZ8              	6.32%
Bootstrap support for Q5KIV8 as seed ortholog is 100%.
Bootstrap support for Q1EPZ9 as seed ortholog is 100%.

Group of orthologs #1008. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:8 E.histolytica:56

Q5KDG5              	100.00%		C4LYC9              	100.00%
Bootstrap support for Q5KDG5 as seed ortholog is 44%.
Alternative seed ortholog is Q5KM81 (8 bits away from this cluster)
Bootstrap support for C4LYC9 as seed ortholog is 100%.

Group of orthologs #1009. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 E.histolytica:56

Q5KK17              	100.00%		C4M3D4              	100.00%
Bootstrap support for Q5KK17 as seed ortholog is 100%.
Bootstrap support for C4M3D4 as seed ortholog is 100%.

Group of orthologs #1010. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 E.histolytica:55

Q5KN72              	100.00%		C4M385              	100.00%
                    	       		C4MAR5              	7.23%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for C4M385 as seed ortholog is 100%.

Group of orthologs #1011. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 E.histolytica:55

Q5KJW6              	100.00%		C4LUD9              	100.00%
Bootstrap support for Q5KJW6 as seed ortholog is 100%.
Bootstrap support for C4LUD9 as seed ortholog is 100%.

Group of orthologs #1012. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 E.histolytica:54

Q5KPG2              	100.00%		C4M5U7              	100.00%
Q5KBE8              	65.94%		C4M8M9              	21.21%
Q5KLQ1              	27.10%		
Q5KE59              	25.56%		
Q5K8B7              	23.40%		
Bootstrap support for Q5KPG2 as seed ortholog is 100%.
Bootstrap support for C4M5U7 as seed ortholog is 100%.

Group of orthologs #1013. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:4 E.histolytica:54

Q5KMQ0              	100.00%		B1N345              	100.00%
                    	       		B1N2N5              	99.52%
Bootstrap support for Q5KMQ0 as seed ortholog is 52%.
Alternative seed ortholog is Q5KI42 (4 bits away from this cluster)
Bootstrap support for B1N345 as seed ortholog is 100%.

Group of orthologs #1014. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 E.histolytica:54

Q5K845              	100.00%		C4LWW1              	100.00%
Bootstrap support for Q5K845 as seed ortholog is 100%.
Bootstrap support for C4LWW1 as seed ortholog is 100%.

Group of orthologs #1015. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 E.histolytica:53

Q5KDP6              	100.00%		C4M3S3              	100.00%
                    	       		C4M476              	17.88%
                    	       		C4M8E0              	14.59%
Bootstrap support for Q5KDP6 as seed ortholog is 100%.
Bootstrap support for C4M3S3 as seed ortholog is 100%.

Group of orthologs #1016. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 E.histolytica:53

Q5KAJ5              	100.00%		C4M7V2              	100.00%
Bootstrap support for Q5KAJ5 as seed ortholog is 100%.
Bootstrap support for C4M7V2 as seed ortholog is 100%.

Group of orthologs #1017. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:52

Q5KH40              	100.00%		C4M3L4              	100.00%
Q5KH07              	5.80%		C4LUG2              	25.61%
                    	       		C4M619              	11.25%
                    	       		C4M3I1              	10.11%
                    	       		C4M8P8              	9.07%
                    	       		C4LZD1              	7.47%
Bootstrap support for Q5KH40 as seed ortholog is 100%.
Bootstrap support for C4M3L4 as seed ortholog is 100%.

Group of orthologs #1018. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:52

Q5KN27              	100.00%		C4LT77              	100.00%
                    	       		C4M912              	100.00%
                    	       		B1N5V4              	51.95%
                    	       		B1N2M3              	51.95%
Bootstrap support for Q5KN27 as seed ortholog is 100%.
Bootstrap support for C4LT77 as seed ortholog is 100%.
Bootstrap support for C4M912 as seed ortholog is 100%.

Group of orthologs #1019. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:52

P0CR60              	100.00%		B1N331              	100.00%
                    	       		C4M6I9              	15.92%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for B1N331 as seed ortholog is 100%.

Group of orthologs #1020. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:52

Q5KPR9              	100.00%		C4MBJ2              	100.00%
                    	       		B1N2I5              	90.32%
Bootstrap support for Q5KPR9 as seed ortholog is 100%.
Bootstrap support for C4MBJ2 as seed ortholog is 100%.

Group of orthologs #1021. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 E.histolytica:3

Q5KPX4              	100.00%		C4LYX1              	100.00%
Bootstrap support for Q5KPX4 as seed ortholog is 100%.
Bootstrap support for C4LYX1 as seed ortholog is 61%.
Alternative seed ortholog is C4M1B4 (3 bits away from this cluster)

Group of orthologs #1022. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 E.histolytica:51

Q5KFF3              	100.00%		C4LTW8              	100.00%
                    	       		C4M8X8              	7.06%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for C4LTW8 as seed ortholog is 100%.

Group of orthologs #1023. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 E.histolytica:51

Q5KBG4              	100.00%		C4LZP1              	100.00%
Bootstrap support for Q5KBG4 as seed ortholog is 100%.
Bootstrap support for C4LZP1 as seed ortholog is 100%.

Group of orthologs #1024. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 E.histolytica:51

Q5KKU9              	100.00%		C4LU49              	100.00%
Bootstrap support for Q5KKU9 as seed ortholog is 100%.
Bootstrap support for C4LU49 as seed ortholog is 100%.

Group of orthologs #1025. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 E.histolytica:51

Q5KDT6              	100.00%		C4M1A6              	100.00%
Bootstrap support for Q5KDT6 as seed ortholog is 100%.
Bootstrap support for C4M1A6 as seed ortholog is 100%.

Group of orthologs #1026. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 E.histolytica:50

Q5KJS3              	100.00%		C4M349              	100.00%
Q5KEM2              	31.45%		
Q5K9K0              	7.16%		
Bootstrap support for Q5KJS3 as seed ortholog is 100%.
Bootstrap support for C4M349 as seed ortholog is 100%.

Group of orthologs #1027. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 E.histolytica:50

Q5KK54              	100.00%		C4M0C1              	100.00%
                    	       		C4LTX5              	10.13%
Bootstrap support for Q5KK54 as seed ortholog is 100%.
Bootstrap support for C4M0C1 as seed ortholog is 100%.

Group of orthologs #1028. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 E.histolytica:49

Q5K7F8              	100.00%		C4M4T4              	100.00%
                    	       		C4LY69              	92.18%
                    	       		C4MAI6              	46.30%
Bootstrap support for Q5K7F8 as seed ortholog is 100%.
Bootstrap support for C4M4T4 as seed ortholog is 100%.

Group of orthologs #1029. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 E.histolytica:49

Q5KIL7              	100.00%		C4LTP6              	100.00%
                    	       		C4LU47              	32.73%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for C4LTP6 as seed ortholog is 100%.

Group of orthologs #1030. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 E.histolytica:49

Q5KJ72              	100.00%		C4M1T5              	100.00%
Bootstrap support for Q5KJ72 as seed ortholog is 100%.
Bootstrap support for C4M1T5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 48 bits
Score difference with first non-orthologous sequence - C.neoformans:48 E.histolytica:48

Q5KJU9              	100.00%		C4LXZ8              	100.00%
Q5KLT5              	9.64%		C4MAX0              	30.04%
                    	       		C4M6W0              	16.09%
                    	       		C4LTZ5              	12.60%
Bootstrap support for Q5KJU9 as seed ortholog is 100%.
Bootstrap support for C4LXZ8 as seed ortholog is 100%.

Group of orthologs #1032. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 E.histolytica:47

Q5KDL6              	100.00%		C4LUN3              	100.00%
Bootstrap support for Q5KDL6 as seed ortholog is 100%.
Bootstrap support for C4LUN3 as seed ortholog is 100%.

Group of orthologs #1033. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 E.histolytica:47

Q5K9P1              	100.00%		C4M2F8              	100.00%
Bootstrap support for Q5K9P1 as seed ortholog is 100%.
Bootstrap support for C4M2F8 as seed ortholog is 100%.

Group of orthologs #1034. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 E.histolytica:4

Q5KJW8              	100.00%		C4LV23              	100.00%
Bootstrap support for Q5KJW8 as seed ortholog is 100%.
Bootstrap support for C4LV23 as seed ortholog is 57%.
Alternative seed ortholog is C4M1B4 (4 bits away from this cluster)

Group of orthologs #1035. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 E.histolytica:45

Q5KI35              	100.00%		C4M8T1              	100.00%
Bootstrap support for Q5KI35 as seed ortholog is 100%.
Bootstrap support for C4M8T1 as seed ortholog is 100%.

Group of orthologs #1036. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 E.histolytica:44

Q5KB49              	100.00%		B1N467              	100.00%
                    	       		C4M0P9              	75.32%
                    	       		C4M1L5              	25.32%
Bootstrap support for Q5KB49 as seed ortholog is 100%.
Bootstrap support for B1N467 as seed ortholog is 100%.

Group of orthologs #1037. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 E.histolytica:44

Q5KCL2              	100.00%		C4LW93              	100.00%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for C4LW93 as seed ortholog is 100%.

Group of orthologs #1038. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 E.histolytica:43

Q5KBW1              	100.00%		C4LSZ9              	100.00%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for C4LSZ9 as seed ortholog is 100%.

Group of orthologs #1039. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 E.histolytica:43

Q5KPR6              	100.00%		B1N4A2              	100.00%
Bootstrap support for Q5KPR6 as seed ortholog is 100%.
Bootstrap support for B1N4A2 as seed ortholog is 100%.

Group of orthologs #1040. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 E.histolytica:43

Q5KKZ1              	100.00%		C4MA26              	100.00%
Bootstrap support for Q5KKZ1 as seed ortholog is 100%.
Bootstrap support for C4MA26 as seed ortholog is 100%.

Group of orthologs #1041. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 E.histolytica:41

Q5K7D1              	100.00%		C4LWE6              	100.00%
                    	       		C4LSF0              	25.33%
Bootstrap support for Q5K7D1 as seed ortholog is 100%.
Bootstrap support for C4LWE6 as seed ortholog is 100%.

Group of orthologs #1042. Best score 40 bits
Score difference with first non-orthologous sequence - C.neoformans:40 E.histolytica:40

Q5KI44              	100.00%		C4M417              	100.00%
Bootstrap support for Q5KI44 as seed ortholog is 100%.
Bootstrap support for C4M417 as seed ortholog is 100%.