###################################
410 groups of orthologs
506 in-paralogs from C.neoformans
464 in-paralogs from D.radiodurans
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1380 bits
Score difference with first non-orthologous sequence - C.neoformans:1380 D.radiodurans:1380

Q5KA63              	100.00%		Q9RXX2              	100.00%
Bootstrap support for Q5KA63 as seed ortholog is 100%.
Bootstrap support for Q9RXX2 as seed ortholog is 100%.

Group of orthologs #2. Best score 1008 bits
Score difference with first non-orthologous sequence - C.neoformans:1008 D.radiodurans:1008

Q5KL19              	100.00%		Q9RTF5              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for Q9RTF5 as seed ortholog is 100%.

Group of orthologs #3. Best score 742 bits
Score difference with first non-orthologous sequence - C.neoformans:32 D.radiodurans:258

Q5KPH0              	100.00%		Q9RVI3              	100.00%
Bootstrap support for Q5KPH0 as seed ortholog is 70%.
Alternative seed ortholog is Q5KDZ1 (32 bits away from this cluster)
Bootstrap support for Q9RVI3 as seed ortholog is 100%.

Group of orthologs #4. Best score 719 bits
Score difference with first non-orthologous sequence - C.neoformans:719 D.radiodurans:719

Q5K7V3              	100.00%		Q9RWK0              	100.00%
Bootstrap support for Q5K7V3 as seed ortholog is 100%.
Bootstrap support for Q9RWK0 as seed ortholog is 100%.

Group of orthologs #5. Best score 665 bits
Score difference with first non-orthologous sequence - C.neoformans:665 D.radiodurans:665

P0CS22              	100.00%		Q9RYJ4              	100.00%
Bootstrap support for P0CS22 as seed ortholog is 100%.
Bootstrap support for Q9RYJ4 as seed ortholog is 100%.

Group of orthologs #6. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:606 D.radiodurans:606

Q5KMH0              	100.00%		Q9RXM3              	100.00%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for Q9RXM3 as seed ortholog is 100%.

Group of orthologs #7. Best score 594 bits
Score difference with first non-orthologous sequence - C.neoformans:594 D.radiodurans:594

Q5KLU5              	100.00%		Q9RTL8              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for Q9RTL8 as seed ortholog is 100%.

Group of orthologs #8. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:442 D.radiodurans:586

Q5KGV5              	100.00%		Q9RWG8              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for Q9RWG8 as seed ortholog is 100%.

Group of orthologs #9. Best score 584 bits
Score difference with first non-orthologous sequence - C.neoformans:299 D.radiodurans:245

Q5K8B0              	100.00%		Q9RYQ0              	100.00%
Q5KNR3              	68.55%		
Bootstrap support for Q5K8B0 as seed ortholog is 99%.
Bootstrap support for Q9RYQ0 as seed ortholog is 100%.

Group of orthologs #10. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:436 D.radiodurans:438

Q5KMF6              	100.00%		Q9RY06              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for Q9RY06 as seed ortholog is 100%.

Group of orthologs #11. Best score 556 bits
Score difference with first non-orthologous sequence - C.neoformans:111 D.radiodurans:501

Q5KJ21              	100.00%		Q9RS71              	100.00%
Bootstrap support for Q5KJ21 as seed ortholog is 98%.
Bootstrap support for Q9RS71 as seed ortholog is 100%.

Group of orthologs #12. Best score 556 bits
Score difference with first non-orthologous sequence - C.neoformans:556 D.radiodurans:383

Q5KD10              	100.00%		Q9RYN3              	100.00%
Bootstrap support for Q5KD10 as seed ortholog is 100%.
Bootstrap support for Q9RYN3 as seed ortholog is 100%.

Group of orthologs #13. Best score 555 bits
Score difference with first non-orthologous sequence - C.neoformans:405 D.radiodurans:132

Q5KN48              	100.00%		Q9RRL7              	100.00%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for Q9RRL7 as seed ortholog is 99%.

Group of orthologs #14. Best score 543 bits
Score difference with first non-orthologous sequence - C.neoformans:442 D.radiodurans:543

Q5KBA0              	100.00%		Q9RVS0              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for Q9RVS0 as seed ortholog is 100%.

Group of orthologs #15. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:66 D.radiodurans:539

Q5K8W5              	100.00%		Q9RY23              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 92%.
Bootstrap support for Q9RY23 as seed ortholog is 100%.

Group of orthologs #16. Best score 536 bits
Score difference with first non-orthologous sequence - C.neoformans:428 D.radiodurans:536

Q5KLW7              	100.00%		Q9RWQ9              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for Q9RWQ9 as seed ortholog is 100%.

Group of orthologs #17. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:535 D.radiodurans:404

Q5K8D2              	100.00%		Q9RV84              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for Q9RV84 as seed ortholog is 100%.

Group of orthologs #18. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:349 D.radiodurans:227

P0CN32              	100.00%		Q9RXK5              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for Q9RXK5 as seed ortholog is 99%.

Group of orthologs #19. Best score 535 bits
Score difference with first non-orthologous sequence - C.neoformans:271 D.radiodurans:447

Q5KPM2              	100.00%		Q9RUP8              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 99%.
Bootstrap support for Q9RUP8 as seed ortholog is 100%.

Group of orthologs #20. Best score 531 bits
Score difference with first non-orthologous sequence - C.neoformans:531 D.radiodurans:531

Q5KKV6              	100.00%		Q9RR70              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for Q9RR70 as seed ortholog is 100%.

Group of orthologs #21. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:331 D.radiodurans:235

Q5K722              	100.00%		Q9RRN5              	100.00%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for Q9RRN5 as seed ortholog is 99%.

Group of orthologs #22. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:402 D.radiodurans:494

Q5K9M8              	100.00%		Q9RWU8              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for Q9RWU8 as seed ortholog is 100%.

Group of orthologs #23. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 D.radiodurans:492

Q5K9E9              	100.00%		Q9RT91              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for Q9RT91 as seed ortholog is 100%.

Group of orthologs #24. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:488 D.radiodurans:488

P0CQ16              	100.00%		Q9RXG4              	100.00%
Bootstrap support for P0CQ16 as seed ortholog is 100%.
Bootstrap support for Q9RXG4 as seed ortholog is 100%.

Group of orthologs #25. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:309 D.radiodurans:484

Q5KDQ7              	100.00%		Q9R342              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for Q9R342 as seed ortholog is 100%.

Group of orthologs #26. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:362 D.radiodurans:483

Q5KBW0              	100.00%		Q9RWG7              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for Q9RWG7 as seed ortholog is 100%.

Group of orthologs #27. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 D.radiodurans:459

Q5KLA1              	100.00%		Q9RU23              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for Q9RU23 as seed ortholog is 100%.

Group of orthologs #28. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 D.radiodurans:448

Q5KMU3              	100.00%		Q9RSP3              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for Q9RSP3 as seed ortholog is 100%.

Group of orthologs #29. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 D.radiodurans:320

Q5KL32              	100.00%		Q9RTN9              	100.00%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for Q9RTN9 as seed ortholog is 100%.

Group of orthologs #30. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:391 D.radiodurans:443

Q5KNJ3              	100.00%		Q9RVT1              	100.00%
Bootstrap support for Q5KNJ3 as seed ortholog is 100%.
Bootstrap support for Q9RVT1 as seed ortholog is 100%.

Group of orthologs #31. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:354 D.radiodurans:433

Q5KPJ5              	100.00%		Q9RU76              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 100%.
Bootstrap support for Q9RU76 as seed ortholog is 100%.

Group of orthologs #32. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 D.radiodurans:431

Q5KF97              	100.00%		Q9RS27              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for Q9RS27 as seed ortholog is 100%.

Group of orthologs #33. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 D.radiodurans:425

Q5KP62              	100.00%		Q9RWM6              	100.00%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for Q9RWM6 as seed ortholog is 100%.

Group of orthologs #34. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 D.radiodurans:417

Q5KB69              	100.00%		Q9RVP6              	100.00%
Bootstrap support for Q5KB69 as seed ortholog is 100%.
Bootstrap support for Q9RVP6 as seed ortholog is 100%.

Group of orthologs #35. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:8 D.radiodurans:414

Q5KLI4              	100.00%		Q9RVK7              	100.00%
Bootstrap support for Q5KLI4 as seed ortholog is 51%.
Alternative seed ortholog is Q5KKS9 (8 bits away from this cluster)
Bootstrap support for Q9RVK7 as seed ortholog is 100%.

Group of orthologs #36. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 D.radiodurans:413

Q5KLA7              	100.00%		Q9RR60              	100.00%
Q5KG11              	11.23%		
Bootstrap support for Q5KLA7 as seed ortholog is 100%.
Bootstrap support for Q9RR60 as seed ortholog is 100%.

Group of orthologs #37. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:59 D.radiodurans:408

Q5KEY3              	100.00%		Q9RRB1              	100.00%
Q5KBK5              	8.82%		Q9RYN4              	33.07%
Bootstrap support for Q5KEY3 as seed ortholog is 89%.
Bootstrap support for Q9RRB1 as seed ortholog is 100%.

Group of orthologs #38. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:217 D.radiodurans:16

Q5KHN7              	100.00%		Q9RRG6              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for Q9RRG6 as seed ortholog is 67%.
Alternative seed ortholog is Q9RRW5 (16 bits away from this cluster)

Group of orthologs #39. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 D.radiodurans:166

Q5KKU4              	100.00%		Q9RU52              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for Q9RU52 as seed ortholog is 99%.

Group of orthologs #40. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 D.radiodurans:390

Q5K9Z1              	100.00%		Q9RUL7              	100.00%
Bootstrap support for Q5K9Z1 as seed ortholog is 100%.
Bootstrap support for Q9RUL7 as seed ortholog is 100%.

Group of orthologs #41. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 D.radiodurans:390

Q5KKT5              	100.00%		Q9RY34              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for Q9RY34 as seed ortholog is 100%.

Group of orthologs #42. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:182 D.radiodurans:117

Q5KBZ0              	100.00%		Q9RZE6              	100.00%
Q5KIV9              	20.33%		
Bootstrap support for Q5KBZ0 as seed ortholog is 100%.
Bootstrap support for Q9RZE6 as seed ortholog is 99%.

Group of orthologs #43. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 D.radiodurans:382

Q5K6V0              	100.00%		Q9RW25              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for Q9RW25 as seed ortholog is 100%.

Group of orthologs #44. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:316 D.radiodurans:258

Q5KIZ5              	100.00%		Q9RUZ2              	100.00%
Bootstrap support for Q5KIZ5 as seed ortholog is 100%.
Bootstrap support for Q9RUZ2 as seed ortholog is 100%.

Group of orthologs #45. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:326 D.radiodurans:377

Q5KBB1              	100.00%		Q9RXE1              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for Q9RXE1 as seed ortholog is 100%.

Group of orthologs #46. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:171 D.radiodurans:31

Q5KEX3              	100.00%		Q9RYT8              	100.00%
Q5K8N2              	24.92%		
Q5KIR2              	16.56%		
Bootstrap support for Q5KEX3 as seed ortholog is 99%.
Bootstrap support for Q9RYT8 as seed ortholog is 75%.

Group of orthologs #47. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 D.radiodurans:369

Q5KJ46              	100.00%		Q9RWJ4              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for Q9RWJ4 as seed ortholog is 100%.

Group of orthologs #48. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:362 D.radiodurans:362

Q5KII0              	100.00%		Q9RXK9              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for Q9RXK9 as seed ortholog is 100%.

Group of orthologs #49. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:201 D.radiodurans:168

Q5KDR8              	100.00%		Q9RYH6              	100.00%
Bootstrap support for Q5KDR8 as seed ortholog is 100%.
Bootstrap support for Q9RYH6 as seed ortholog is 99%.

Group of orthologs #50. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:248 D.radiodurans:252

Q5KAM3              	100.00%		Q9RYW0              	100.00%
Bootstrap support for Q5KAM3 as seed ortholog is 100%.
Bootstrap support for Q9RYW0 as seed ortholog is 100%.

Group of orthologs #51. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 D.radiodurans:352

Q5KLD7              	100.00%		Q9RUW4              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for Q9RUW4 as seed ortholog is 100%.

Group of orthologs #52. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 D.radiodurans:350

Q5K8F7              	100.00%		Q9RZA0              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for Q9RZA0 as seed ortholog is 100%.

Group of orthologs #53. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 D.radiodurans:349

Q5KI64              	100.00%		Q9RU92              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for Q9RU92 as seed ortholog is 100%.

Group of orthologs #54. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 D.radiodurans:348

Q5KNR0              	100.00%		Q9RTG5              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for Q9RTG5 as seed ortholog is 100%.

Group of orthologs #55. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 D.radiodurans:347

Q5KK44              	100.00%		Q9RVK8              	100.00%
Q5KK43              	59.53%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for Q9RVK8 as seed ortholog is 100%.

Group of orthologs #56. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:152 D.radiodurans:344

Q5KCL8              	100.00%		Q9RV97              	100.00%
Bootstrap support for Q5KCL8 as seed ortholog is 99%.
Bootstrap support for Q9RV97 as seed ortholog is 100%.

Group of orthologs #57. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 D.radiodurans:341

Q5KK33              	100.00%		Q9RWJ0              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for Q9RWJ0 as seed ortholog is 100%.

Group of orthologs #58. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 D.radiodurans:336

Q5KDP3              	100.00%		Q9RU01              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for Q9RU01 as seed ortholog is 100%.

Group of orthologs #59. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 D.radiodurans:336

Q5KE01              	100.00%		Q9RUP2              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for Q9RUP2 as seed ortholog is 100%.

Group of orthologs #60. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 D.radiodurans:335

Q5KAU8              	100.00%		Q9RYB2              	100.00%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for Q9RYB2 as seed ortholog is 100%.

Group of orthologs #61. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 D.radiodurans:330

Q5KII9              	100.00%		Q9RT38              	100.00%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for Q9RT38 as seed ortholog is 100%.

Group of orthologs #62. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 D.radiodurans:330

Q5KQ22              	100.00%		P56926              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for P56926 as seed ortholog is 100%.

Group of orthologs #63. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:70 D.radiodurans:324

Q5KJV0              	100.00%		Q9RVF7              	100.00%
                    	       		Q9RT09              	10.23%
Bootstrap support for Q5KJV0 as seed ortholog is 97%.
Bootstrap support for Q9RVF7 as seed ortholog is 100%.

Group of orthologs #64. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:138 D.radiodurans:158

Q5KMP3              	100.00%		Q9RY67              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 99%.
Bootstrap support for Q9RY67 as seed ortholog is 99%.

Group of orthologs #65. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 D.radiodurans:323

Q5KCZ2              	100.00%		Q9RU89              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for Q9RU89 as seed ortholog is 100%.

Group of orthologs #66. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 D.radiodurans:322

Q5KHW1              	100.00%		Q9RTE8              	100.00%
Q5K879              	10.47%		
Bootstrap support for Q5KHW1 as seed ortholog is 100%.
Bootstrap support for Q9RTE8 as seed ortholog is 100%.

Group of orthologs #67. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 D.radiodurans:158

Q5KF19              	100.00%		Q9RTH3              	100.00%
Bootstrap support for Q5KF19 as seed ortholog is 100%.
Bootstrap support for Q9RTH3 as seed ortholog is 99%.

Group of orthologs #68. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 D.radiodurans:321

Q5KKG6              	100.00%		Q9RR62              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for Q9RR62 as seed ortholog is 100%.

Group of orthologs #69. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 D.radiodurans:319

Q5KP44              	100.00%		Q9RT87              	100.00%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for Q9RT87 as seed ortholog is 100%.

Group of orthologs #70. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:15 D.radiodurans:131

Q5K7E4              	100.00%		Q9RUK9              	100.00%
Bootstrap support for Q5K7E4 as seed ortholog is 57%.
Alternative seed ortholog is Q5KFT6 (15 bits away from this cluster)
Bootstrap support for Q9RUK9 as seed ortholog is 98%.

Group of orthologs #71. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:163 D.radiodurans:312

Q5KDD7              	100.00%		Q9RU70              	100.00%
Bootstrap support for Q5KDD7 as seed ortholog is 99%.
Bootstrap support for Q9RU70 as seed ortholog is 100%.

Group of orthologs #72. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:191 D.radiodurans:311

Q5KPV3              	100.00%		Q9RSD4              	100.00%
Bootstrap support for Q5KPV3 as seed ortholog is 100%.
Bootstrap support for Q9RSD4 as seed ortholog is 100%.

Group of orthologs #73. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:63 D.radiodurans:300

Q5KP01              	100.00%		Q9RRK9              	100.00%
                    	       		Q9RUF8              	14.86%
                    	       		Q9RZA1              	11.89%
Bootstrap support for Q5KP01 as seed ortholog is 95%.
Bootstrap support for Q9RRK9 as seed ortholog is 100%.

Group of orthologs #74. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:196 D.radiodurans:300

Q5K9D3              	100.00%		Q9RUN7              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 99%.
Bootstrap support for Q9RUN7 as seed ortholog is 100%.

Group of orthologs #75. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 D.radiodurans:300

Q5KMM7              	100.00%		Q9RYF8              	100.00%
Bootstrap support for Q5KMM7 as seed ortholog is 100%.
Bootstrap support for Q9RYF8 as seed ortholog is 100%.

Group of orthologs #76. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 D.radiodurans:299

P0CN74              	100.00%		Q9RUP1              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 100%.
Bootstrap support for Q9RUP1 as seed ortholog is 100%.

Group of orthologs #77. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:39 D.radiodurans:91

Q5KMG1              	100.00%		Q9RYG8              	100.00%
Q5K8R8              	28.77%		Q9RRV6              	9.64%
Bootstrap support for Q5KMG1 as seed ortholog is 80%.
Bootstrap support for Q9RYG8 as seed ortholog is 97%.

Group of orthologs #78. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 D.radiodurans:294

Q5K7B4              	100.00%		Q9RUF5              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for Q9RUF5 as seed ortholog is 100%.

Group of orthologs #79. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 D.radiodurans:294

Q5KD48              	100.00%		Q9RW41              	100.00%
Bootstrap support for Q5KD48 as seed ortholog is 100%.
Bootstrap support for Q9RW41 as seed ortholog is 100%.

Group of orthologs #80. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 D.radiodurans:292

Q5KJH7              	100.00%		Q9RTI9              	100.00%
Bootstrap support for Q5KJH7 as seed ortholog is 100%.
Bootstrap support for Q9RTI9 as seed ortholog is 100%.

Group of orthologs #81. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:106 D.radiodurans:196

Q5KP37              	100.00%		Q9RTH9              	100.00%
Bootstrap support for Q5KP37 as seed ortholog is 99%.
Bootstrap support for Q9RTH9 as seed ortholog is 99%.

Group of orthologs #82. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 D.radiodurans:282

Q5KJB0              	100.00%		Q9RYR5              	100.00%
Bootstrap support for Q5KJB0 as seed ortholog is 100%.
Bootstrap support for Q9RYR5 as seed ortholog is 100%.

Group of orthologs #83. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 D.radiodurans:280

P0CQ34              	100.00%		Q9RYB5              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for Q9RYB5 as seed ortholog is 100%.

Group of orthologs #84. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 D.radiodurans:279

Q5KFV9              	100.00%		Q9RVW0              	100.00%
Q5KGG3              	16.42%		
Q5KIF6              	9.22%		
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for Q9RVW0 as seed ortholog is 100%.

Group of orthologs #85. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 D.radiodurans:276

P0CO58              	100.00%		Q9RWA4              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for Q9RWA4 as seed ortholog is 100%.

Group of orthologs #86. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:91 D.radiodurans:189

Q5K976              	100.00%		Q9RS66              	100.00%
Bootstrap support for Q5K976 as seed ortholog is 99%.
Bootstrap support for Q9RS66 as seed ortholog is 100%.

Group of orthologs #87. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:129 D.radiodurans:112

Q5KJD3              	100.00%		Q9RVK1              	100.00%
Bootstrap support for Q5KJD3 as seed ortholog is 99%.
Bootstrap support for Q9RVK1 as seed ortholog is 99%.

Group of orthologs #88. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 D.radiodurans:272

Q5KAV3              	100.00%		Q9RRI7              	100.00%
Q5KAT4              	59.22%		
Bootstrap support for Q5KAV3 as seed ortholog is 100%.
Bootstrap support for Q9RRI7 as seed ortholog is 100%.

Group of orthologs #89. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:7 D.radiodurans:54

Q5KP35              	100.00%		Q9RUX5              	100.00%
                    	       		Q9RUR4              	6.71%
Bootstrap support for Q5KP35 as seed ortholog is 56%.
Alternative seed ortholog is Q5K707 (7 bits away from this cluster)
Bootstrap support for Q9RUX5 as seed ortholog is 93%.

Group of orthologs #90. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 D.radiodurans:269

Q5KPM5              	100.00%		Q9RWH5              	100.00%
Q5KAF6              	22.89%		
Bootstrap support for Q5KPM5 as seed ortholog is 100%.
Bootstrap support for Q9RWH5 as seed ortholog is 100%.

Group of orthologs #91. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 D.radiodurans:269

Q5KHK8              	100.00%		Q9RSI4              	100.00%
Bootstrap support for Q5KHK8 as seed ortholog is 100%.
Bootstrap support for Q9RSI4 as seed ortholog is 100%.

Group of orthologs #92. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:63 D.radiodurans:84

Q5KKE4              	100.00%		Q9RYR1              	100.00%
                    	       		Q9RZ93              	20.55%
                    	       		Q9RXQ1              	7.55%
Bootstrap support for Q5KKE4 as seed ortholog is 93%.
Bootstrap support for Q9RYR1 as seed ortholog is 97%.

Group of orthologs #93. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 D.radiodurans:264

Q5KJY4              	100.00%		Q9RUK0              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for Q9RUK0 as seed ortholog is 100%.

Group of orthologs #94. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 D.radiodurans:259

Q5KE15              	100.00%		Q9RUY2              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for Q9RUY2 as seed ortholog is 100%.

Group of orthologs #95. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:92 D.radiodurans:189

Q5KB78              	100.00%		Q9RS10              	100.00%
Bootstrap support for Q5KB78 as seed ortholog is 99%.
Bootstrap support for Q9RS10 as seed ortholog is 100%.

Group of orthologs #96. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:58 D.radiodurans:258

Q5KP83              	100.00%		Q9RYC0              	100.00%
Bootstrap support for Q5KP83 as seed ortholog is 96%.
Bootstrap support for Q9RYC0 as seed ortholog is 100%.

Group of orthologs #97. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 D.radiodurans:255

Q5KEX1              	100.00%		Q9RX95              	100.00%
Q5KJ25              	26.72%		
Q5KGT3              	24.53%		
Q5KKN7              	23.01%		
Q5KMH9              	20.51%		
Q5KNB9              	12.04%		
Bootstrap support for Q5KEX1 as seed ortholog is 100%.
Bootstrap support for Q9RX95 as seed ortholog is 100%.

Group of orthologs #98. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 D.radiodurans:255

Q5KEG8              	100.00%		Q9RRD7              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for Q9RRD7 as seed ortholog is 100%.

Group of orthologs #99. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:37 D.radiodurans:255

Q5KIR0              	100.00%		Q9RVJ7              	100.00%
Bootstrap support for Q5KIR0 as seed ortholog is 84%.
Bootstrap support for Q9RVJ7 as seed ortholog is 100%.

Group of orthologs #100. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 D.radiodurans:255

Q5KK07              	100.00%		Q9RXT6              	100.00%
Bootstrap support for Q5KK07 as seed ortholog is 100%.
Bootstrap support for Q9RXT6 as seed ortholog is 100%.

Group of orthologs #101. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 D.radiodurans:116

Q5KPT1              	100.00%		Q9RSU7              	100.00%
Bootstrap support for Q5KPT1 as seed ortholog is 100%.
Bootstrap support for Q9RSU7 as seed ortholog is 99%.

Group of orthologs #102. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 D.radiodurans:254

Q5KN95              	100.00%		Q9RUY3              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for Q9RUY3 as seed ortholog is 100%.

Group of orthologs #103. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 D.radiodurans:102

Q5K9R5              	100.00%		Q9RX30              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for Q9RX30 as seed ortholog is 98%.

Group of orthologs #104. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:37 D.radiodurans:155

Q5KIP0              	100.00%		Q9RYF4              	100.00%
Bootstrap support for Q5KIP0 as seed ortholog is 85%.
Bootstrap support for Q9RYF4 as seed ortholog is 100%.

Group of orthologs #105. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:27 D.radiodurans:116

Q5KI84              	100.00%		Q9RTT2              	100.00%
Bootstrap support for Q5KI84 as seed ortholog is 76%.
Bootstrap support for Q9RTT2 as seed ortholog is 99%.

Group of orthologs #106. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:124 D.radiodurans:250

Q5KQ95              	100.00%		Q9RUF3              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 99%.
Bootstrap support for Q9RUF3 as seed ortholog is 100%.

Group of orthologs #107. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:119 D.radiodurans:248

Q5K7P7              	100.00%		Q9RZE4              	100.00%
                    	       		Q9RS48              	6.88%
Bootstrap support for Q5K7P7 as seed ortholog is 99%.
Bootstrap support for Q9RZE4 as seed ortholog is 100%.

Group of orthologs #108. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 D.radiodurans:248

Q5KMQ2              	100.00%		Q9RTT6              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for Q9RTT6 as seed ortholog is 100%.

Group of orthologs #109. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:198 D.radiodurans:247

Q5KFM3              	100.00%		Q9RSY7              	100.00%
Bootstrap support for Q5KFM3 as seed ortholog is 100%.
Bootstrap support for Q9RSY7 as seed ortholog is 100%.

Group of orthologs #110. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 D.radiodurans:238

Q5K8C0              	100.00%		Q9RTD9              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for Q9RTD9 as seed ortholog is 100%.

Group of orthologs #111. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:47 D.radiodurans:237

Q5KKS0              	100.00%		Q9RUG2              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 85%.
Bootstrap support for Q9RUG2 as seed ortholog is 100%.

Group of orthologs #112. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 D.radiodurans:236

P0CS12              	100.00%		Q9RR67              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for Q9RR67 as seed ortholog is 100%.

Group of orthologs #113. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:81 D.radiodurans:236

Q5K8C6              	100.00%		Q9RZ32              	100.00%
Bootstrap support for Q5K8C6 as seed ortholog is 97%.
Bootstrap support for Q9RZ32 as seed ortholog is 100%.

Group of orthologs #114. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 D.radiodurans:235

Q5KI12              	100.00%		Q9RSZ6              	100.00%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for Q9RSZ6 as seed ortholog is 100%.

Group of orthologs #115. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 D.radiodurans:235

Q5KML2              	100.00%		Q9RU93              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for Q9RU93 as seed ortholog is 100%.

Group of orthologs #116. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 D.radiodurans:79

Q5KHX7              	100.00%		Q9RTA9              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 100%.
Bootstrap support for Q9RTA9 as seed ortholog is 99%.

Group of orthologs #117. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 D.radiodurans:233

Q5KNE3              	100.00%		Q9RW01              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for Q9RW01 as seed ortholog is 100%.

Group of orthologs #118. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 D.radiodurans:232

Q5K8G1              	100.00%		Q9RX19              	100.00%
Bootstrap support for Q5K8G1 as seed ortholog is 100%.
Bootstrap support for Q9RX19 as seed ortholog is 100%.

Group of orthologs #119. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 D.radiodurans:229

P0CM02              	100.00%		Q9RTY9              	100.00%
Bootstrap support for P0CM02 as seed ortholog is 100%.
Bootstrap support for Q9RTY9 as seed ortholog is 100%.

Group of orthologs #120. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 D.radiodurans:229

Q5K7N0              	100.00%		Q9RUM2              	100.00%
Bootstrap support for Q5K7N0 as seed ortholog is 100%.
Bootstrap support for Q9RUM2 as seed ortholog is 100%.

Group of orthologs #121. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 D.radiodurans:228

Q5KD00              	100.00%		Q9RTP8              	100.00%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for Q9RTP8 as seed ortholog is 100%.

Group of orthologs #122. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:156 D.radiodurans:227

Q5KCD2              	100.00%		Q9RT67              	100.00%
Bootstrap support for Q5KCD2 as seed ortholog is 99%.
Bootstrap support for Q9RT67 as seed ortholog is 100%.

Group of orthologs #123. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 D.radiodurans:225

P0CN04              	100.00%		P56864              	100.00%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for P56864 as seed ortholog is 100%.

Group of orthologs #124. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:52 D.radiodurans:104

Q5KDE2              	100.00%		Q9RVG1              	100.00%
Bootstrap support for Q5KDE2 as seed ortholog is 94%.
Bootstrap support for Q9RVG1 as seed ortholog is 99%.

Group of orthologs #125. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:117 D.radiodurans:115

Q5KJ42              	100.00%		Q9RV76              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 99%.
Bootstrap support for Q9RV76 as seed ortholog is 99%.

Group of orthologs #126. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:155 D.radiodurans:221

Q5KNE6              	100.00%		Q9RSC3              	100.00%
Q5K809              	54.77%		
Bootstrap support for Q5KNE6 as seed ortholog is 99%.
Bootstrap support for Q9RSC3 as seed ortholog is 100%.

Group of orthologs #127. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 D.radiodurans:220

Q5KDX8              	100.00%		Q9RUD2              	100.00%
Q5KCA3              	22.46%		
Bootstrap support for Q5KDX8 as seed ortholog is 100%.
Bootstrap support for Q9RUD2 as seed ortholog is 100%.

Group of orthologs #128. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 D.radiodurans:172

Q5KNG6              	100.00%		Q9RYK0              	100.00%
Bootstrap support for Q5KNG6 as seed ortholog is 100%.
Bootstrap support for Q9RYK0 as seed ortholog is 100%.

Group of orthologs #129. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:219

Q5K8F5              	100.00%		Q9RW80              	100.00%
Bootstrap support for Q5K8F5 as seed ortholog is 95%.
Bootstrap support for Q9RW80 as seed ortholog is 100%.

Group of orthologs #130. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 D.radiodurans:218

Q5KIK6              	100.00%		Q9RTN7              	100.00%
Q5KE64              	49.96%		
Q5K7P0              	44.77%		
Bootstrap support for Q5KIK6 as seed ortholog is 100%.
Bootstrap support for Q9RTN7 as seed ortholog is 100%.

Group of orthologs #131. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 D.radiodurans:218

Q5KPM3              	100.00%		Q9RTI6              	100.00%
Bootstrap support for Q5KPM3 as seed ortholog is 100%.
Bootstrap support for Q9RTI6 as seed ortholog is 100%.

Group of orthologs #132. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:19 D.radiodurans:47

Q5KNM0              	100.00%		Q9RW75              	100.00%
Bootstrap support for Q5KNM0 as seed ortholog is 70%.
Alternative seed ortholog is Q5K8Q2 (19 bits away from this cluster)
Bootstrap support for Q9RW75 as seed ortholog is 85%.

Group of orthologs #133. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 D.radiodurans:217

Q5KQ80              	100.00%		Q9RXE0              	100.00%
Q5K9N7              	11.63%		
Q5KM52              	10.07%		
Bootstrap support for Q5KQ80 as seed ortholog is 100%.
Bootstrap support for Q9RXE0 as seed ortholog is 100%.

Group of orthologs #134. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 D.radiodurans:217

Q5KND4              	100.00%		Q9RWH9              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for Q9RWH9 as seed ortholog is 100%.

Group of orthologs #135. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 D.radiodurans:216

Q5KMY7              	100.00%		Q9RV96              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for Q9RV96 as seed ortholog is 100%.

Group of orthologs #136. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 D.radiodurans:214

Q5K726              	100.00%		Q9RSZ7              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for Q9RSZ7 as seed ortholog is 100%.

Group of orthologs #137. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 D.radiodurans:212

Q5KP99              	100.00%		Q9RSG4              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for Q9RSG4 as seed ortholog is 100%.

Group of orthologs #138. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 D.radiodurans:209

Q5KCC3              	100.00%		Q9RTD8              	100.00%
Bootstrap support for Q5KCC3 as seed ortholog is 100%.
Bootstrap support for Q9RTD8 as seed ortholog is 100%.

Group of orthologs #139. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 D.radiodurans:209

Q5KGH1              	100.00%		Q9RTC9              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for Q9RTC9 as seed ortholog is 100%.

Group of orthologs #140. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 D.radiodurans:208

Q5KJ10              	100.00%		Q9RWI4              	100.00%
Bootstrap support for Q5KJ10 as seed ortholog is 100%.
Bootstrap support for Q9RWI4 as seed ortholog is 100%.

Group of orthologs #141. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 D.radiodurans:77

Q5KGK1              	100.00%		Q9RZL7              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for Q9RZL7 as seed ortholog is 93%.

Group of orthologs #142. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:34 D.radiodurans:51

Q5K705              	100.00%		Q9RTR4              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 75%.
Bootstrap support for Q9RTR4 as seed ortholog is 85%.

Group of orthologs #143. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 D.radiodurans:148

Q5KHR6              	100.00%		Q9RXU1              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for Q9RXU1 as seed ortholog is 99%.

Group of orthologs #144. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:33 D.radiodurans:206

Q5KHJ1              	100.00%		Q9RVH4              	100.00%
Q5KEI6              	19.98%		
Bootstrap support for Q5KHJ1 as seed ortholog is 83%.
Bootstrap support for Q9RVH4 as seed ortholog is 100%.

Group of orthologs #145. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 D.radiodurans:206

P0CM20              	100.00%		Q9RTQ2              	100.00%
Bootstrap support for P0CM20 as seed ortholog is 100%.
Bootstrap support for Q9RTQ2 as seed ortholog is 100%.

Group of orthologs #146. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:92 D.radiodurans:117

Q5KB48              	100.00%		Q9RY38              	100.00%
Bootstrap support for Q5KB48 as seed ortholog is 99%.
Bootstrap support for Q9RY38 as seed ortholog is 99%.

Group of orthologs #147. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:148 D.radiodurans:203

Q5KLT3              	100.00%		Q9RUS1              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 100%.
Bootstrap support for Q9RUS1 as seed ortholog is 100%.

Group of orthologs #148. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 D.radiodurans:202

Q5KC33              	100.00%		Q9RVV9              	100.00%
Q5KIB7              	21.77%		
Q5KEV8              	9.05%		
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for Q9RVV9 as seed ortholog is 100%.

Group of orthologs #149. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:115 D.radiodurans:201

Q5KAU0              	100.00%		Q9RTW7              	100.00%
Q5KJ82              	14.61%		Q9RVC6              	10.51%
Bootstrap support for Q5KAU0 as seed ortholog is 98%.
Bootstrap support for Q9RTW7 as seed ortholog is 100%.

Group of orthologs #150. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 D.radiodurans:201

P0CQ18              	100.00%		Q9RTU7              	100.00%
P0CQ20              	55.85%		
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for Q9RTU7 as seed ortholog is 100%.

Group of orthologs #151. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 D.radiodurans:200

Q5K7Y0              	100.00%		Q9RVQ7              	100.00%
Q5K918              	100.00%		
Bootstrap support for Q5K7Y0 as seed ortholog is 100%.
Bootstrap support for Q5K918 as seed ortholog is 100%.
Bootstrap support for Q9RVQ7 as seed ortholog is 100%.

Group of orthologs #152. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 D.radiodurans:200

P0CQ36              	100.00%		Q9RYC6              	100.00%
Bootstrap support for P0CQ36 as seed ortholog is 100%.
Bootstrap support for Q9RYC6 as seed ortholog is 100%.

Group of orthologs #153. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:17 D.radiodurans:200

Q5KHS3              	100.00%		Q9RUV5              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 73%.
Alternative seed ortholog is Q5KMV4 (17 bits away from this cluster)
Bootstrap support for Q9RUV5 as seed ortholog is 100%.

Group of orthologs #154. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 D.radiodurans:199

P0CN82              	100.00%		Q9RTB7              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for Q9RTB7 as seed ortholog is 100%.

Group of orthologs #155. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 D.radiodurans:199

Q5KN34              	100.00%		Q9RTJ5              	100.00%
Bootstrap support for Q5KN34 as seed ortholog is 100%.
Bootstrap support for Q9RTJ5 as seed ortholog is 100%.

Group of orthologs #156. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 D.radiodurans:198

Q5KK62              	100.00%		Q9RX14              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for Q9RX14 as seed ortholog is 100%.

Group of orthologs #157. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:31 D.radiodurans:197

P0CQ66              	100.00%		Q9RUX1              	100.00%
Bootstrap support for P0CQ66 as seed ortholog is 68%.
Alternative seed ortholog is Q5K960 (31 bits away from this cluster)
Bootstrap support for Q9RUX1 as seed ortholog is 100%.

Group of orthologs #158. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:104 D.radiodurans:195

Q5KES1              	100.00%		Q9RYN9              	100.00%
Bootstrap support for Q5KES1 as seed ortholog is 98%.
Bootstrap support for Q9RYN9 as seed ortholog is 100%.

Group of orthologs #159. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 D.radiodurans:194

Q5K9P5              	100.00%		P56905              	100.00%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for P56905 as seed ortholog is 100%.

Group of orthologs #160. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:11 D.radiodurans:193

P0CQ78              	100.00%		Q9RXH8              	100.00%
P0CQ76              	8.58%		
P0CQ88              	7.27%		
P0CQ98              	6.05%		
Bootstrap support for P0CQ78 as seed ortholog is 87%.
Bootstrap support for Q9RXH8 as seed ortholog is 100%.

Group of orthologs #161. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 D.radiodurans:192

P0CL98              	100.00%		Q9RR92              	100.00%
Bootstrap support for P0CL98 as seed ortholog is 100%.
Bootstrap support for Q9RR92 as seed ortholog is 100%.

Group of orthologs #162. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:42 D.radiodurans:78

Q5KC50              	100.00%		Q9RV78              	100.00%
Bootstrap support for Q5KC50 as seed ortholog is 92%.
Bootstrap support for Q9RV78 as seed ortholog is 99%.

Group of orthologs #163. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:75 D.radiodurans:190

Q5KA58              	100.00%		Q9RR71              	100.00%
                    	       		Q9RXA0              	18.79%
Bootstrap support for Q5KA58 as seed ortholog is 92%.
Bootstrap support for Q9RR71 as seed ortholog is 100%.

Group of orthologs #164. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 D.radiodurans:190

Q5KGP7              	100.00%		Q9RU87              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for Q9RU87 as seed ortholog is 100%.

Group of orthologs #165. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:64 D.radiodurans:187

Q5KN70              	100.00%		Q9RUU0              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 95%.
Bootstrap support for Q9RUU0 as seed ortholog is 100%.

Group of orthologs #166. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:18 D.radiodurans:186

Q5KLS2              	100.00%		Q9RRY6              	100.00%
Bootstrap support for Q5KLS2 as seed ortholog is 75%.
Bootstrap support for Q9RRY6 as seed ortholog is 100%.

Group of orthologs #167. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 D.radiodurans:185

P0CN60              	100.00%		Q9RVQ2              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for Q9RVQ2 as seed ortholog is 100%.

Group of orthologs #168. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 D.radiodurans:183

Q5KEH0              	100.00%		Q9RWL5              	100.00%
Bootstrap support for Q5KEH0 as seed ortholog is 100%.
Bootstrap support for Q9RWL5 as seed ortholog is 100%.

Group of orthologs #169. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 D.radiodurans:182

Q5KK09              	100.00%		Q9RUR9              	100.00%
Bootstrap support for Q5KK09 as seed ortholog is 100%.
Bootstrap support for Q9RUR9 as seed ortholog is 100%.

Group of orthologs #170. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:9 D.radiodurans:129

Q5KGY4              	100.00%		Q9RVM9              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 60%.
Alternative seed ortholog is P0CO88 (9 bits away from this cluster)
Bootstrap support for Q9RVM9 as seed ortholog is 99%.

Group of orthologs #171. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 D.radiodurans:175

Q5KDF1              	100.00%		Q9RTB6              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for Q9RTB6 as seed ortholog is 100%.

Group of orthologs #172. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 D.radiodurans:173

Q5KFH8              	100.00%		Q9RV98              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for Q9RV98 as seed ortholog is 100%.

Group of orthologs #173. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:33 D.radiodurans:173

Q5KGR5              	100.00%		Q9RYC1              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 80%.
Bootstrap support for Q9RYC1 as seed ortholog is 100%.

Group of orthologs #174. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 D.radiodurans:170

Q5KBS3              	100.00%		Q9RUV2              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for Q9RUV2 as seed ortholog is 100%.

Group of orthologs #175. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 D.radiodurans:170

Q5KCH8              	100.00%		Q9RX20              	100.00%
Bootstrap support for Q5KCH8 as seed ortholog is 100%.
Bootstrap support for Q9RX20 as seed ortholog is 100%.

Group of orthologs #176. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:92 D.radiodurans:12

Q5KQ79              	100.00%		Q9RWJ7              	100.00%
Bootstrap support for Q5KQ79 as seed ortholog is 97%.
Bootstrap support for Q9RWJ7 as seed ortholog is 59%.
Alternative seed ortholog is Q9RWP3 (12 bits away from this cluster)

Group of orthologs #177. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 D.radiodurans:165

Q5KFA0              	100.00%		Q9RU74              	100.00%
Bootstrap support for Q5KFA0 as seed ortholog is 100%.
Bootstrap support for Q9RU74 as seed ortholog is 100%.

Group of orthologs #178. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 D.radiodurans:164

Q5KJC4              	100.00%		Q9RSD7              	100.00%
Bootstrap support for Q5KJC4 as seed ortholog is 100%.
Bootstrap support for Q9RSD7 as seed ortholog is 100%.

Group of orthologs #179. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 D.radiodurans:163

Q5KKM6              	100.00%		Q9RTR0              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for Q9RTR0 as seed ortholog is 100%.

Group of orthologs #180. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:54 D.radiodurans:160

Q5KFP5              	100.00%		Q9RWW0              	100.00%
Bootstrap support for Q5KFP5 as seed ortholog is 90%.
Bootstrap support for Q9RWW0 as seed ortholog is 100%.

Group of orthologs #181. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:38 D.radiodurans:14

Q5KAM1              	100.00%		Q9RYT2              	100.00%
Bootstrap support for Q5KAM1 as seed ortholog is 89%.
Bootstrap support for Q9RYT2 as seed ortholog is 66%.
Alternative seed ortholog is Q9LBE3 (14 bits away from this cluster)

Group of orthologs #182. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 D.radiodurans:158

Q5K761              	100.00%		Q9RTX5              	100.00%
Q5KD20              	13.90%		
Bootstrap support for Q5K761 as seed ortholog is 100%.
Bootstrap support for Q9RTX5 as seed ortholog is 100%.

Group of orthologs #183. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 D.radiodurans:158

Q5KBM8              	100.00%		Q9RUL9              	100.00%
Bootstrap support for Q5KBM8 as seed ortholog is 100%.
Bootstrap support for Q9RUL9 as seed ortholog is 100%.

Group of orthologs #184. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 D.radiodurans:156

Q5K9R3              	100.00%		Q9RU02              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for Q9RU02 as seed ortholog is 100%.

Group of orthologs #185. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 D.radiodurans:156

Q5KGQ3              	100.00%		Q9RVZ8              	100.00%
Bootstrap support for Q5KGQ3 as seed ortholog is 100%.
Bootstrap support for Q9RVZ8 as seed ortholog is 100%.

Group of orthologs #186. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 D.radiodurans:156

Q5KK51              	100.00%		Q9RVC7              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for Q9RVC7 as seed ortholog is 100%.

Group of orthologs #187. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 D.radiodurans:156

Q5KNF9              	100.00%		Q9RUI5              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for Q9RUI5 as seed ortholog is 100%.

Group of orthologs #188. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 D.radiodurans:85

Q5KK45              	100.00%		Q9RY70              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for Q9RY70 as seed ortholog is 97%.

Group of orthologs #189. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:22 D.radiodurans:9

Q5KPY2              	100.00%		Q9RT26              	100.00%
Bootstrap support for Q5KPY2 as seed ortholog is 74%.
Alternative seed ortholog is Q5KLC5 (22 bits away from this cluster)
Bootstrap support for Q9RT26 as seed ortholog is 62%.
Alternative seed ortholog is Q9RYV6 (9 bits away from this cluster)

Group of orthologs #190. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 D.radiodurans:154

P0CO22              	100.00%		Q9RX91              	100.00%
Bootstrap support for P0CO22 as seed ortholog is 100%.
Bootstrap support for Q9RX91 as seed ortholog is 100%.

Group of orthologs #191. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 D.radiodurans:154

Q5KFS5              	100.00%		Q9RSR5              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for Q9RSR5 as seed ortholog is 100%.

Group of orthologs #192. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:101 D.radiodurans:153

Q5K6X0              	100.00%		Q9RXK7              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 100%.
Bootstrap support for Q9RXK7 as seed ortholog is 100%.

Group of orthologs #193. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 D.radiodurans:153

Q5KHM2              	100.00%		Q9RYX7              	100.00%
Bootstrap support for Q5KHM2 as seed ortholog is 100%.
Bootstrap support for Q9RYX7 as seed ortholog is 100%.

Group of orthologs #194. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 D.radiodurans:152

Q5KHC0              	100.00%		Q9RXZ9              	100.00%
Bootstrap support for Q5KHC0 as seed ortholog is 100%.
Bootstrap support for Q9RXZ9 as seed ortholog is 100%.

Group of orthologs #195. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 D.radiodurans:150

Q5KDR3              	100.00%		Q9RSE6              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for Q9RSE6 as seed ortholog is 100%.

Group of orthologs #196. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 D.radiodurans:150

Q5KND5              	100.00%		Q9RX64              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for Q9RX64 as seed ortholog is 100%.

Group of orthologs #197. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:3 D.radiodurans:149

Q5KC30              	100.00%		Q9RWL9              	100.00%
Bootstrap support for Q5KC30 as seed ortholog is 54%.
Alternative seed ortholog is Q5KA27 (3 bits away from this cluster)
Bootstrap support for Q9RWL9 as seed ortholog is 100%.

Group of orthologs #198. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:17 D.radiodurans:148

Q5KGX1              	100.00%		Q9RU32              	100.00%
Bootstrap support for Q5KGX1 as seed ortholog is 72%.
Alternative seed ortholog is Q5KGW5 (17 bits away from this cluster)
Bootstrap support for Q9RU32 as seed ortholog is 100%.

Group of orthologs #199. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 D.radiodurans:148

Q5KGQ8              	100.00%		Q9RXK2              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for Q9RXK2 as seed ortholog is 100%.

Group of orthologs #200. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:16 D.radiodurans:148

Q5KMM3              	100.00%		Q9RVG8              	100.00%
Bootstrap support for Q5KMM3 as seed ortholog is 66%.
Alternative seed ortholog is Q5KJT6 (16 bits away from this cluster)
Bootstrap support for Q9RVG8 as seed ortholog is 100%.

Group of orthologs #201. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 D.radiodurans:147

Q5KDM0              	100.00%		Q9RVS1              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for Q9RVS1 as seed ortholog is 100%.

Group of orthologs #202. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 D.radiodurans:146

Q5KBD4              	100.00%		Q9RRU5              	100.00%
Bootstrap support for Q5KBD4 as seed ortholog is 100%.
Bootstrap support for Q9RRU5 as seed ortholog is 100%.

Group of orthologs #203. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 D.radiodurans:146

Q5KGJ6              	100.00%		P56861              	100.00%
Bootstrap support for Q5KGJ6 as seed ortholog is 100%.
Bootstrap support for P56861 as seed ortholog is 100%.

Group of orthologs #204. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:59 D.radiodurans:145

Q5KK95              	100.00%		Q9RRZ6              	100.00%
Bootstrap support for Q5KK95 as seed ortholog is 92%.
Bootstrap support for Q9RRZ6 as seed ortholog is 100%.

Group of orthologs #205. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 D.radiodurans:145

Q5KKQ0              	100.00%		Q9RRY0              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for Q9RRY0 as seed ortholog is 100%.

Group of orthologs #206. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:48 D.radiodurans:145

Q5KGY0              	100.00%		Q9RXJ9              	100.00%
Bootstrap support for Q5KGY0 as seed ortholog is 93%.
Bootstrap support for Q9RXJ9 as seed ortholog is 100%.

Group of orthologs #207. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 D.radiodurans:144

Q5KG36              	100.00%		Q9RUP5              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for Q9RUP5 as seed ortholog is 100%.

Group of orthologs #208. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 D.radiodurans:143

Q5KQ71              	100.00%		Q9RYM1              	100.00%
Q5K9T3              	28.24%		
Q5KIR1              	7.63%		
Q5KKJ9              	5.34%		
Bootstrap support for Q5KQ71 as seed ortholog is 100%.
Bootstrap support for Q9RYM1 as seed ortholog is 100%.

Group of orthologs #209. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 D.radiodurans:32

Q5K8J3              	100.00%		Q9RUN4              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for Q9RUN4 as seed ortholog is 79%.

Group of orthologs #210. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 D.radiodurans:143

Q5KCY4              	100.00%		Q9RW94              	100.00%
Bootstrap support for Q5KCY4 as seed ortholog is 100%.
Bootstrap support for Q9RW94 as seed ortholog is 100%.

Group of orthologs #211. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 D.radiodurans:143

Q5KEL1              	100.00%		Q9RYY2              	100.00%
Bootstrap support for Q5KEL1 as seed ortholog is 100%.
Bootstrap support for Q9RYY2 as seed ortholog is 100%.

Group of orthologs #212. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 D.radiodurans:142

Q5K8J5              	100.00%		Q9RVU7              	100.00%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for Q9RVU7 as seed ortholog is 100%.

Group of orthologs #213. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:19 D.radiodurans:141

Q5KEU8              	100.00%		Q9RRF2              	100.00%
Bootstrap support for Q5KEU8 as seed ortholog is 64%.
Alternative seed ortholog is Q5K895 (19 bits away from this cluster)
Bootstrap support for Q9RRF2 as seed ortholog is 100%.

Group of orthologs #214. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 D.radiodurans:140

Q5K6Y9              	100.00%		Q9RVV1              	100.00%
                    	       		Q9RVZ7              	18.12%
                    	       		Q9RSD8              	15.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for Q9RVV1 as seed ortholog is 100%.

Group of orthologs #215. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 D.radiodurans:140

Q5K850              	100.00%		Q9RTK1              	100.00%
Bootstrap support for Q5K850 as seed ortholog is 100%.
Bootstrap support for Q9RTK1 as seed ortholog is 100%.

Group of orthologs #216. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 D.radiodurans:139

Q5K8I0              	100.00%		Q9RY66              	100.00%
Bootstrap support for Q5K8I0 as seed ortholog is 100%.
Bootstrap support for Q9RY66 as seed ortholog is 100%.

Group of orthologs #217. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 D.radiodurans:138

Q5KGR6              	100.00%		Q9RRJ1              	100.00%
Q5KAX0              	7.39%		
Bootstrap support for Q5KGR6 as seed ortholog is 100%.
Bootstrap support for Q9RRJ1 as seed ortholog is 100%.

Group of orthologs #218. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:3 D.radiodurans:137

Q5KJK1              	100.00%		Q9RTU4              	100.00%
Bootstrap support for Q5KJK1 as seed ortholog is 56%.
Alternative seed ortholog is Q5KJG0 (3 bits away from this cluster)
Bootstrap support for Q9RTU4 as seed ortholog is 100%.

Group of orthologs #219. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:49 D.radiodurans:136

Q5KAY4              	100.00%		Q9RX24              	100.00%
Bootstrap support for Q5KAY4 as seed ortholog is 90%.
Bootstrap support for Q9RX24 as seed ortholog is 100%.

Group of orthologs #220. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 D.radiodurans:136

Q5KI17              	100.00%		Q9RWP9              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for Q9RWP9 as seed ortholog is 100%.

Group of orthologs #221. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:29 D.radiodurans:134

P0CP84              	100.00%		Q9RXR9              	100.00%
P0CP86              	12.83%		Q9RRF0              	8.61%
                    	       		Q9RT72              	8.24%
Bootstrap support for P0CP84 as seed ortholog is 87%.
Bootstrap support for Q9RXR9 as seed ortholog is 100%.

Group of orthologs #222. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 D.radiodurans:134

Q5K9F7              	100.00%		Q9RVQ1              	100.00%
Bootstrap support for Q5K9F7 as seed ortholog is 100%.
Bootstrap support for Q9RVQ1 as seed ortholog is 100%.

Group of orthologs #223. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 D.radiodurans:134

Q5KHQ9              	100.00%		Q9RV66              	100.00%
Bootstrap support for Q5KHQ9 as seed ortholog is 100%.
Bootstrap support for Q9RV66 as seed ortholog is 100%.

Group of orthologs #224. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:90 D.radiodurans:134

Q5KNA0              	100.00%		Q9RWD7              	100.00%
Bootstrap support for Q5KNA0 as seed ortholog is 97%.
Bootstrap support for Q9RWD7 as seed ortholog is 100%.

Group of orthologs #225. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 D.radiodurans:133

Q5KJ01              	100.00%		Q9RS58              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for Q9RS58 as seed ortholog is 100%.

Group of orthologs #226. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 D.radiodurans:51

Q5KFI9              	100.00%		Q9RU08              	100.00%
                    	       		Q9RVJ8              	9.46%
Bootstrap support for Q5KFI9 as seed ortholog is 100%.
Bootstrap support for Q9RU08 as seed ortholog is 91%.

Group of orthologs #227. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 D.radiodurans:43

Q5K993              	100.00%		Q9RUB8              	100.00%
Q5KGI6              	26.23%		
Q5KPY6              	17.21%		
Q5K924              	15.07%		
Bootstrap support for Q5K993 as seed ortholog is 100%.
Bootstrap support for Q9RUB8 as seed ortholog is 77%.

Group of orthologs #228. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 D.radiodurans:129

Q5K7J8              	100.00%		Q9RXS1              	100.00%
Q5KGZ2              	11.65%		
Q5K6W3              	5.92%		
Bootstrap support for Q5K7J8 as seed ortholog is 100%.
Bootstrap support for Q9RXS1 as seed ortholog is 100%.

Group of orthologs #229. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 D.radiodurans:129

Q5KA36              	100.00%		Q9RR63              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for Q9RR63 as seed ortholog is 100%.

Group of orthologs #230. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:31 D.radiodurans:128

P0CO42              	100.00%		Q9RSK7              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 85%.
Bootstrap support for Q9RSK7 as seed ortholog is 100%.

Group of orthologs #231. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 D.radiodurans:128

P0CM88              	100.00%		Q9RZ85              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for Q9RZ85 as seed ortholog is 100%.

Group of orthologs #232. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 D.radiodurans:128

Q5KMF3              	100.00%		Q9RSS7              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 100%.
Bootstrap support for Q9RSS7 as seed ortholog is 100%.

Group of orthologs #233. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:70 D.radiodurans:40

P0CO20              	100.00%		Q9RZC3              	100.00%
Q5KDW3              	14.47%		
Bootstrap support for P0CO20 as seed ortholog is 98%.
Bootstrap support for Q9RZC3 as seed ortholog is 84%.

Group of orthologs #234. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 D.radiodurans:127

Q5KJZ3              	100.00%		Q9RXH3              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 100%.
Bootstrap support for Q9RXH3 as seed ortholog is 100%.

Group of orthologs #235. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 D.radiodurans:126

Q5KE42              	100.00%		Q9RRE4              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for Q9RRE4 as seed ortholog is 100%.

Group of orthologs #236. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 D.radiodurans:125

Q5KBQ7              	100.00%		Q9RVU0              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for Q9RVU0 as seed ortholog is 100%.

Group of orthologs #237. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 D.radiodurans:124

P0CO52              	100.00%		Q9RYH5              	100.00%
Bootstrap support for P0CO52 as seed ortholog is 100%.
Bootstrap support for Q9RYH5 as seed ortholog is 100%.

Group of orthologs #238. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 D.radiodurans:124

Q5KBI4              	100.00%		Q9RV70              	100.00%
Bootstrap support for Q5KBI4 as seed ortholog is 100%.
Bootstrap support for Q9RV70 as seed ortholog is 100%.

Group of orthologs #239. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 D.radiodurans:124

Q5K7M8              	100.00%		Q9RZ88              	100.00%
Bootstrap support for Q5K7M8 as seed ortholog is 100%.
Bootstrap support for Q9RZ88 as seed ortholog is 100%.

Group of orthologs #240. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:48 D.radiodurans:124

Q5KKU0              	100.00%		Q9RU07              	100.00%
Bootstrap support for Q5KKU0 as seed ortholog is 87%.
Bootstrap support for Q9RU07 as seed ortholog is 100%.

Group of orthologs #241. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:35 D.radiodurans:123

Q5K9K6              	100.00%		Q9RYI0              	100.00%
Q5KEQ4              	7.89%		
Bootstrap support for Q5K9K6 as seed ortholog is 85%.
Bootstrap support for Q9RYI0 as seed ortholog is 100%.

Group of orthologs #242. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 D.radiodurans:123

Q5KHZ1              	100.00%		Q9RS38              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for Q9RS38 as seed ortholog is 100%.

Group of orthologs #243. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 D.radiodurans:123

Q5KFS4              	100.00%		Q9RU71              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for Q9RU71 as seed ortholog is 100%.

Group of orthologs #244. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:38 D.radiodurans:123

Q5KNW0              	100.00%		Q9RUA6              	100.00%
Bootstrap support for Q5KNW0 as seed ortholog is 85%.
Bootstrap support for Q9RUA6 as seed ortholog is 100%.

Group of orthologs #245. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 D.radiodurans:122

Q5KKM8              	100.00%		Q9RR76              	100.00%
Q5KPY7              	37.14%		
Bootstrap support for Q5KKM8 as seed ortholog is 100%.
Bootstrap support for Q9RR76 as seed ortholog is 100%.

Group of orthologs #246. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 D.radiodurans:122

Q5KPX1              	100.00%		Q9RRT0              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for Q9RRT0 as seed ortholog is 100%.

Group of orthologs #247. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 D.radiodurans:122

Q5KQ30              	100.00%		Q9RS42              	100.00%
Bootstrap support for Q5KQ30 as seed ortholog is 100%.
Bootstrap support for Q9RS42 as seed ortholog is 100%.

Group of orthologs #248. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 D.radiodurans:121

Q5KB97              	100.00%		Q9RXT4              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for Q9RXT4 as seed ortholog is 100%.

Group of orthologs #249. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 D.radiodurans:64

Q5KGS8              	100.00%		Q9RZ99              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for Q9RZ99 as seed ortholog is 95%.

Group of orthologs #250. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:63 D.radiodurans:75

Q5K8L2              	100.00%		Q9RR99              	100.00%
                    	       		Q9RTQ6              	6.36%
Bootstrap support for Q5K8L2 as seed ortholog is 92%.
Bootstrap support for Q9RR99 as seed ortholog is 95%.

Group of orthologs #251. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 D.radiodurans:120

Q5K9A0              	100.00%		Q9RUY4              	100.00%
Q5KEE6              	21.31%		
Bootstrap support for Q5K9A0 as seed ortholog is 100%.
Bootstrap support for Q9RUY4 as seed ortholog is 100%.

Group of orthologs #252. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:13 D.radiodurans:120

Q5K8L0              	100.00%		Q9RYQ7              	100.00%
Bootstrap support for Q5K8L0 as seed ortholog is 63%.
Alternative seed ortholog is Q5KJT6 (13 bits away from this cluster)
Bootstrap support for Q9RYQ7 as seed ortholog is 100%.

Group of orthologs #253. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:28 D.radiodurans:120

Q5KLF1              	100.00%		Q9RRH9              	100.00%
Bootstrap support for Q5KLF1 as seed ortholog is 93%.
Bootstrap support for Q9RRH9 as seed ortholog is 100%.

Group of orthologs #254. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 D.radiodurans:118

Q5KAJ9              	100.00%		Q9RUZ0              	100.00%
                    	       		Q9RSB9              	5.50%
Bootstrap support for Q5KAJ9 as seed ortholog is 100%.
Bootstrap support for Q9RUZ0 as seed ortholog is 100%.

Group of orthologs #255. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 D.radiodurans:118

Q5KJL2              	100.00%		Q9RY00              	100.00%
Bootstrap support for Q5KJL2 as seed ortholog is 100%.
Bootstrap support for Q9RY00 as seed ortholog is 100%.

Group of orthologs #256. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:14 D.radiodurans:117

P0CP96              	100.00%		Q9RTC6              	100.00%
Bootstrap support for P0CP96 as seed ortholog is 76%.
Bootstrap support for Q9RTC6 as seed ortholog is 100%.

Group of orthologs #257. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 D.radiodurans:116

Q5KDQ4              	100.00%		Q9RSL3              	100.00%
Bootstrap support for Q5KDQ4 as seed ortholog is 100%.
Bootstrap support for Q9RSL3 as seed ortholog is 100%.

Group of orthologs #258. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 D.radiodurans:114

Q5K760              	100.00%		Q9RYX4              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for Q9RYX4 as seed ortholog is 100%.

Group of orthologs #259. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:39 D.radiodurans:37

Q5KJT3              	100.00%		Q9RT30              	100.00%
Q5KML8              	23.77%		
Bootstrap support for Q5KJT3 as seed ortholog is 89%.
Bootstrap support for Q9RT30 as seed ortholog is 88%.

Group of orthologs #260. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 D.radiodurans:113

Q5K7B2              	100.00%		Q9RTF3              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for Q9RTF3 as seed ortholog is 100%.

Group of orthologs #261. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:27 D.radiodurans:113

Q5KAB8              	100.00%		Q9RRX8              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 70%.
Alternative seed ortholog is Q5KJG7 (27 bits away from this cluster)
Bootstrap support for Q9RRX8 as seed ortholog is 100%.

Group of orthologs #262. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:56 D.radiodurans:113

Q5KK88              	100.00%		Q9RX16              	100.00%
Bootstrap support for Q5KK88 as seed ortholog is 95%.
Bootstrap support for Q9RX16 as seed ortholog is 100%.

Group of orthologs #263. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 D.radiodurans:112

F5HFW5              	100.00%		Q9RZB3              	100.00%
Bootstrap support for F5HFW5 as seed ortholog is 100%.
Bootstrap support for Q9RZB3 as seed ortholog is 100%.

Group of orthologs #264. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 D.radiodurans:111

Q5KCD7              	100.00%		Q9RS39              	100.00%
Bootstrap support for Q5KCD7 as seed ortholog is 100%.
Bootstrap support for Q9RS39 as seed ortholog is 100%.

Group of orthologs #265. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 D.radiodurans:110

Q5KAU9              	100.00%		Q9RUL0              	100.00%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for Q9RUL0 as seed ortholog is 100%.

Group of orthologs #266. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 D.radiodurans:109

Q5KNV5              	100.00%		Q9RXJ5              	100.00%
Bootstrap support for Q5KNV5 as seed ortholog is 100%.
Bootstrap support for Q9RXJ5 as seed ortholog is 100%.

Group of orthologs #267. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 D.radiodurans:108

Q5KL84              	100.00%		Q9RT56              	100.00%
Bootstrap support for Q5KL84 as seed ortholog is 100%.
Bootstrap support for Q9RT56 as seed ortholog is 100%.

Group of orthologs #268. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 D.radiodurans:108

Q5KI93              	100.00%		Q9RY44              	100.00%
Bootstrap support for Q5KI93 as seed ortholog is 100%.
Bootstrap support for Q9RY44 as seed ortholog is 100%.

Group of orthologs #269. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 D.radiodurans:106

Q5KED7              	100.00%		Q9RRH6              	100.00%
Q5KG73              	9.08%		
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for Q9RRH6 as seed ortholog is 100%.

Group of orthologs #270. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 D.radiodurans:106

Q5KLW1              	100.00%		P56860              	100.00%
Bootstrap support for Q5KLW1 as seed ortholog is 100%.
Bootstrap support for P56860 as seed ortholog is 100%.

Group of orthologs #271. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 D.radiodurans:105

P0CR18              	100.00%		Q9RW24              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for Q9RW24 as seed ortholog is 100%.

Group of orthologs #272. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 D.radiodurans:105

Q5KAT0              	100.00%		Q9RW57              	100.00%
Bootstrap support for Q5KAT0 as seed ortholog is 100%.
Bootstrap support for Q9RW57 as seed ortholog is 100%.

Group of orthologs #273. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 D.radiodurans:103

Q5KDI9              	100.00%		Q9RV99              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for Q9RV99 as seed ortholog is 100%.

Group of orthologs #274. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:23 D.radiodurans:102

Q5K883              	100.00%		Q9RTQ5              	100.00%
Q5KC67              	31.68%		
Q5KEQ8              	14.08%		
Bootstrap support for Q5K883 as seed ortholog is 73%.
Alternative seed ortholog is Q5KLD5 (23 bits away from this cluster)
Bootstrap support for Q9RTQ5 as seed ortholog is 100%.

Group of orthologs #275. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 D.radiodurans:102

Q5KI33              	100.00%		Q9RRU0              	100.00%
                    	       		Q9RZK7              	30.94%
                    	       		Q9RWL4              	24.65%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for Q9RRU0 as seed ortholog is 100%.

Group of orthologs #276. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 D.radiodurans:102

Q5KN74              	100.00%		Q9RSZ3              	100.00%
Q5K9A8              	6.57%		
Bootstrap support for Q5KN74 as seed ortholog is 100%.
Bootstrap support for Q9RSZ3 as seed ortholog is 100%.

Group of orthologs #277. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 D.radiodurans:101

Q5K9N0              	100.00%		Q9RUL8              	100.00%
Bootstrap support for Q5K9N0 as seed ortholog is 100%.
Bootstrap support for Q9RUL8 as seed ortholog is 100%.

Group of orthologs #278. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 D.radiodurans:101

Q5KQ45              	100.00%		Q9RWB2              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for Q9RWB2 as seed ortholog is 100%.

Group of orthologs #279. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 D.radiodurans:98

Q5KLS4              	100.00%		Q9RYU4              	100.00%
Q5KLR3              	64.40%		
Bootstrap support for Q5KLS4 as seed ortholog is 100%.
Bootstrap support for Q9RYU4 as seed ortholog is 100%.

Group of orthologs #280. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 D.radiodurans:97

Q5KMC4              	100.00%		Q9RVY1              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for Q9RVY1 as seed ortholog is 100%.

Group of orthologs #281. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 D.radiodurans:96

Q5KC65              	100.00%		Q9RVR5              	100.00%
Q5KGP3              	16.91%		
Q5KE86              	14.65%		
Q5KL35              	13.68%		
Q5KN52              	12.58%		
Q5KH49              	12.38%		
Q5KJN9              	11.48%		
Q5KED3              	11.06%		
Q5KN23              	9.70%		
Bootstrap support for Q5KC65 as seed ortholog is 100%.
Bootstrap support for Q9RVR5 as seed ortholog is 100%.

Group of orthologs #282. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 D.radiodurans:96

Q5KJI9              	100.00%		Q9RX43              	100.00%
                    	       		Q9RSF5              	8.67%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for Q9RX43 as seed ortholog is 100%.

Group of orthologs #283. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 D.radiodurans:96

Q5KQ18              	100.00%		Q9RX33              	100.00%
Q5KQ94              	39.95%		
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for Q9RX33 as seed ortholog is 100%.

Group of orthologs #284. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 D.radiodurans:96

Q5KAX6              	100.00%		Q9RU68              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for Q9RU68 as seed ortholog is 100%.

Group of orthologs #285. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 D.radiodurans:96

Q5KIC8              	100.00%		Q9RRP1              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for Q9RRP1 as seed ortholog is 100%.

Group of orthologs #286. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 D.radiodurans:96

Q5KF86              	100.00%		Q9RXZ8              	100.00%
Bootstrap support for Q5KF86 as seed ortholog is 100%.
Bootstrap support for Q9RXZ8 as seed ortholog is 100%.

Group of orthologs #287. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:25 D.radiodurans:95

Q5KP84              	100.00%		Q9RV17              	100.00%
Q5KBC8              	28.28%		
Q5KAN2              	16.35%		
Q5KM47              	12.05%		
Q5KI66              	9.31%		
Q5KJV3              	8.95%		
Q5KEJ1              	7.28%		
Bootstrap support for Q5KP84 as seed ortholog is 78%.
Bootstrap support for Q9RV17 as seed ortholog is 100%.

Group of orthologs #288. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 D.radiodurans:95

Q5KK70              	100.00%		Q9RT73              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for Q9RT73 as seed ortholog is 100%.

Group of orthologs #289. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 D.radiodurans:95

Q5KJB8              	100.00%		Q9RU91              	100.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for Q9RU91 as seed ortholog is 100%.

Group of orthologs #290. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 D.radiodurans:33

Q5KEW1              	100.00%		Q9RSP0              	100.00%
Q5KBN1              	25.37%		
Bootstrap support for Q5KEW1 as seed ortholog is 100%.
Bootstrap support for Q9RSP0 as seed ortholog is 81%.

Group of orthologs #291. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 D.radiodurans:94

Q5KGS7              	100.00%		Q9RYW2              	100.00%
Bootstrap support for Q5KGS7 as seed ortholog is 100%.
Bootstrap support for Q9RYW2 as seed ortholog is 100%.

Group of orthologs #292. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 D.radiodurans:94

Q5KIC1              	100.00%		Q9RZ04              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for Q9RZ04 as seed ortholog is 100%.

Group of orthologs #293. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 D.radiodurans:93

Q5KH86              	100.00%		Q9RRS7              	100.00%
Bootstrap support for Q5KH86 as seed ortholog is 100%.
Bootstrap support for Q9RRS7 as seed ortholog is 100%.

Group of orthologs #294. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 D.radiodurans:92

Q5KP80              	100.00%		Q9RR96              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for Q9RR96 as seed ortholog is 100%.

Group of orthologs #295. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 D.radiodurans:92

Q5KL66              	100.00%		Q9RWG6              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for Q9RWG6 as seed ortholog is 100%.

Group of orthologs #296. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 D.radiodurans:92

Q5KNB6              	100.00%		Q9RUZ4              	100.00%
Bootstrap support for Q5KNB6 as seed ortholog is 100%.
Bootstrap support for Q9RUZ4 as seed ortholog is 100%.

Group of orthologs #297. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:48 D.radiodurans:91

Q5KM48              	100.00%		Q9RXY1              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 98%.
Bootstrap support for Q9RXY1 as seed ortholog is 100%.

Group of orthologs #298. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 D.radiodurans:90

Q5KG76              	100.00%		Q9RXB2              	100.00%
Bootstrap support for Q5KG76 as seed ortholog is 100%.
Bootstrap support for Q9RXB2 as seed ortholog is 100%.

Group of orthologs #299. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 D.radiodurans:89

Q5K8R7              	100.00%		Q9RR78              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for Q9RR78 as seed ortholog is 100%.

Group of orthologs #300. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 D.radiodurans:89

Q5K7G9              	100.00%		Q9RV05              	100.00%
Bootstrap support for Q5K7G9 as seed ortholog is 100%.
Bootstrap support for Q9RV05 as seed ortholog is 100%.

Group of orthologs #301. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:25 D.radiodurans:89

Q5KJU6              	100.00%		Q9RXJ2              	100.00%
Bootstrap support for Q5KJU6 as seed ortholog is 83%.
Bootstrap support for Q9RXJ2 as seed ortholog is 100%.

Group of orthologs #302. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 D.radiodurans:89

Q5KLA3              	100.00%		Q9RX11              	100.00%
Bootstrap support for Q5KLA3 as seed ortholog is 100%.
Bootstrap support for Q9RX11 as seed ortholog is 100%.

Group of orthologs #303. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:23 D.radiodurans:88

Q5K862              	100.00%		Q9RW70              	100.00%
Q5KD32              	100.00%		
Q5KD31              	61.11%		
Q5K861              	60.49%		
Q5KJE2              	51.70%		
Q5KEN0              	38.54%		
Q5KH90              	33.95%		
Bootstrap support for Q5K862 as seed ortholog is 70%.
Alternative seed ortholog is Q5KFZ8 (23 bits away from this cluster)
Bootstrap support for Q5KD32 as seed ortholog is 71%.
Alternative seed ortholog is Q5KFZ8 (23 bits away from this cluster)
Bootstrap support for Q9RW70 as seed ortholog is 100%.

Group of orthologs #304. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:20 D.radiodurans:25

P0CR36              	100.00%		Q9RTY0              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 75%.
Bootstrap support for Q9RTY0 as seed ortholog is 81%.

Group of orthologs #305. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 D.radiodurans:88

Q5KCT3              	100.00%		Q9RV24              	100.00%
Bootstrap support for Q5KCT3 as seed ortholog is 100%.
Bootstrap support for Q9RV24 as seed ortholog is 100%.

Group of orthologs #306. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:29 D.radiodurans:88

Q5KPK9              	100.00%		Q9RSY9              	100.00%
Bootstrap support for Q5KPK9 as seed ortholog is 78%.
Bootstrap support for Q9RSY9 as seed ortholog is 100%.

Group of orthologs #307. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 D.radiodurans:87

Q5K7B5              	100.00%		Q9RZA7              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for Q9RZA7 as seed ortholog is 100%.

Group of orthologs #308. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 D.radiodurans:87

Q5K9T9              	100.00%		Q9RXA3              	100.00%
Bootstrap support for Q5K9T9 as seed ortholog is 100%.
Bootstrap support for Q9RXA3 as seed ortholog is 100%.

Group of orthologs #309. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 D.radiodurans:87

Q5KPK7              	100.00%		Q9RSW3              	100.00%
Bootstrap support for Q5KPK7 as seed ortholog is 100%.
Bootstrap support for Q9RSW3 as seed ortholog is 100%.

Group of orthologs #310. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 D.radiodurans:86

Q5K8Z0              	100.00%		Q9RSI1              	100.00%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for Q9RSI1 as seed ortholog is 100%.

Group of orthologs #311. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 D.radiodurans:86

Q5KJY8              	100.00%		Q9RTK2              	100.00%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for Q9RTK2 as seed ortholog is 100%.

Group of orthologs #312. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 D.radiodurans:85

Q5KLK0              	100.00%		Q9RUK6              	100.00%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for Q9RUK6 as seed ortholog is 100%.

Group of orthologs #313. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 D.radiodurans:23

Q5K9Q9              	100.00%		Q9RUT0              	100.00%
                    	       		Q9RY88              	22.78%
                    	       		Q9RSH1              	22.46%
                    	       		Q9RZ16              	13.89%
                    	       		Q9RSC7              	10.02%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for Q9RUT0 as seed ortholog is 76%.

Group of orthologs #314. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 D.radiodurans:84

Q5KFK6              	100.00%		Q9RY19              	100.00%
Q5KK72              	10.23%		
Bootstrap support for Q5KFK6 as seed ortholog is 100%.
Bootstrap support for Q9RY19 as seed ortholog is 100%.

Group of orthologs #315. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:22 D.radiodurans:29

Q5KEB3              	100.00%		Q9RS85              	100.00%
Bootstrap support for Q5KEB3 as seed ortholog is 80%.
Bootstrap support for Q9RS85 as seed ortholog is 87%.

Group of orthologs #316. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 D.radiodurans:83

Q5KKZ0              	100.00%		Q9RUQ9              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 100%.
Bootstrap support for Q9RUQ9 as seed ortholog is 100%.

Group of orthologs #317. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 D.radiodurans:82

Q5KI10              	100.00%		Q9RU79              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for Q9RU79 as seed ortholog is 100%.

Group of orthologs #318. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 D.radiodurans:81

Q5KF36              	100.00%		Q9RV69              	100.00%
Bootstrap support for Q5KF36 as seed ortholog is 100%.
Bootstrap support for Q9RV69 as seed ortholog is 100%.

Group of orthologs #319. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 D.radiodurans:81

Q5KKG7              	100.00%		Q9RSS8              	100.00%
Bootstrap support for Q5KKG7 as seed ortholog is 100%.
Bootstrap support for Q9RSS8 as seed ortholog is 100%.

Group of orthologs #320. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 D.radiodurans:27

Q5KM46              	100.00%		Q9RRM7              	100.00%
Bootstrap support for Q5KM46 as seed ortholog is 100%.
Bootstrap support for Q9RRM7 as seed ortholog is 74%.
Alternative seed ortholog is Q9RWP3 (27 bits away from this cluster)

Group of orthologs #321. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:32 D.radiodurans:34

Q5KK06              	100.00%		Q9RW23              	100.00%
Bootstrap support for Q5KK06 as seed ortholog is 87%.
Bootstrap support for Q9RW23 as seed ortholog is 94%.

Group of orthologs #322. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 D.radiodurans:80

Q5KGC2              	100.00%		Q9RRQ3              	100.00%
Bootstrap support for Q5KGC2 as seed ortholog is 100%.
Bootstrap support for Q9RRQ3 as seed ortholog is 100%.

Group of orthologs #323. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 D.radiodurans:16

Q5K7T2              	100.00%		Q9RR83              	100.00%
Q5K7U1              	33.10%		
Q5KKM9              	25.59%		
Q5KF40              	17.84%		
Bootstrap support for Q5K7T2 as seed ortholog is 100%.
Bootstrap support for Q9RR83 as seed ortholog is 81%.

Group of orthologs #324. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 D.radiodurans:79

Q5KIW5              	100.00%		Q9RUE2              	100.00%
Bootstrap support for Q5KIW5 as seed ortholog is 100%.
Bootstrap support for Q9RUE2 as seed ortholog is 100%.

Group of orthologs #325. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 D.radiodurans:79

Q5KKF6              	100.00%		Q9RWU9              	100.00%
Bootstrap support for Q5KKF6 as seed ortholog is 100%.
Bootstrap support for Q9RWU9 as seed ortholog is 100%.

Group of orthologs #326. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:20 D.radiodurans:79

Q5KKW4              	100.00%		Q9RXJ0              	100.00%
Bootstrap support for Q5KKW4 as seed ortholog is 77%.
Bootstrap support for Q9RXJ0 as seed ortholog is 100%.

Group of orthologs #327. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:23 D.radiodurans:78

Q5KLT5              	100.00%		Q9RRF7              	100.00%
Bootstrap support for Q5KLT5 as seed ortholog is 72%.
Alternative seed ortholog is Q5KFL0 (23 bits away from this cluster)
Bootstrap support for Q9RRF7 as seed ortholog is 100%.

Group of orthologs #328. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 D.radiodurans:77

Q5KGM0              	100.00%		Q9RTP6              	100.00%
                    	       		Q9RXH4              	48.50%
Bootstrap support for Q5KGM0 as seed ortholog is 100%.
Bootstrap support for Q9RTP6 as seed ortholog is 100%.

Group of orthologs #329. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 D.radiodurans:77

Q5KE92              	100.00%		Q9RRC4              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for Q9RRC4 as seed ortholog is 100%.

Group of orthologs #330. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 D.radiodurans:77

Q5KG75              	100.00%		Q9RVZ5              	100.00%
Bootstrap support for Q5KG75 as seed ortholog is 100%.
Bootstrap support for Q9RVZ5 as seed ortholog is 100%.

Group of orthologs #331. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 D.radiodurans:77

Q5KJJ0              	100.00%		Q9RXR2              	100.00%
Bootstrap support for Q5KJJ0 as seed ortholog is 100%.
Bootstrap support for Q9RXR2 as seed ortholog is 100%.

Group of orthologs #332. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 D.radiodurans:76

Q5KKG2              	100.00%		Q9RTQ3              	100.00%
Q5KDQ6              	19.15%		
Bootstrap support for Q5KKG2 as seed ortholog is 100%.
Bootstrap support for Q9RTQ3 as seed ortholog is 100%.

Group of orthologs #333. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 D.radiodurans:76

Q5K952              	100.00%		Q9RUP6              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for Q9RUP6 as seed ortholog is 100%.

Group of orthologs #334. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 D.radiodurans:76

P0CS70              	100.00%		Q9RX35              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for Q9RX35 as seed ortholog is 100%.

Group of orthologs #335. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 D.radiodurans:76

Q5K8F4              	100.00%		Q9RYN6              	100.00%
Bootstrap support for Q5K8F4 as seed ortholog is 100%.
Bootstrap support for Q9RYN6 as seed ortholog is 100%.

Group of orthologs #336. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 D.radiodurans:75

Q5KDG7              	100.00%		Q9RVX8              	100.00%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for Q9RVX8 as seed ortholog is 100%.

Group of orthologs #337. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 D.radiodurans:75

Q5KND2              	100.00%		Q9RVU9              	100.00%
Bootstrap support for Q5KND2 as seed ortholog is 100%.
Bootstrap support for Q9RVU9 as seed ortholog is 100%.

Group of orthologs #338. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 D.radiodurans:74

Q5KM29              	100.00%		Q9RTP0              	100.00%
Bootstrap support for Q5KM29 as seed ortholog is 100%.
Bootstrap support for Q9RTP0 as seed ortholog is 100%.

Group of orthologs #339. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 D.radiodurans:74

Q5KK55              	100.00%		Q9RVS8              	100.00%
Bootstrap support for Q5KK55 as seed ortholog is 100%.
Bootstrap support for Q9RVS8 as seed ortholog is 100%.

Group of orthologs #340. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 D.radiodurans:74

Q5KNW3              	100.00%		Q9RW61              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 100%.
Bootstrap support for Q9RW61 as seed ortholog is 100%.

Group of orthologs #341. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 D.radiodurans:73

Q5KBB0              	100.00%		Q9RSK9              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for Q9RSK9 as seed ortholog is 100%.

Group of orthologs #342. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 D.radiodurans:72

Q5KE70              	100.00%		Q9RXZ0              	100.00%
Bootstrap support for Q5KE70 as seed ortholog is 100%.
Bootstrap support for Q9RXZ0 as seed ortholog is 100%.

Group of orthologs #343. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 D.radiodurans:72

Q5KK13              	100.00%		Q9RY40              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for Q9RY40 as seed ortholog is 100%.

Group of orthologs #344. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 D.radiodurans:71

Q5KIA1              	100.00%		Q9RRG1              	100.00%
                    	       		Q9RXT9              	6.90%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for Q9RRG1 as seed ortholog is 100%.

Group of orthologs #345. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 D.radiodurans:71

Q5KKU8              	100.00%		Q9RW18              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for Q9RW18 as seed ortholog is 100%.

Group of orthologs #346. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 D.radiodurans:71

Q5KN26              	100.00%		Q9RV82              	100.00%
Bootstrap support for Q5KN26 as seed ortholog is 100%.
Bootstrap support for Q9RV82 as seed ortholog is 100%.

Group of orthologs #347. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 D.radiodurans:71

Q5KL07              	100.00%		Q9RYY9              	100.00%
Bootstrap support for Q5KL07 as seed ortholog is 100%.
Bootstrap support for Q9RYY9 as seed ortholog is 100%.

Group of orthologs #348. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 D.radiodurans:70

Q5KLB3              	100.00%		Q9RWG5              	100.00%
Bootstrap support for Q5KLB3 as seed ortholog is 100%.
Bootstrap support for Q9RWG5 as seed ortholog is 100%.

Group of orthologs #349. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 D.radiodurans:69

Q5KAD9              	100.00%		Q9RUV3              	100.00%
Bootstrap support for Q5KAD9 as seed ortholog is 100%.
Bootstrap support for Q9RUV3 as seed ortholog is 100%.

Group of orthologs #350. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 D.radiodurans:21

Q5KG59              	100.00%		Q9RUM8              	100.00%
                    	       		Q9RXV1              	100.00%
                    	       		Q9RU15              	23.59%
                    	       		Q9RTV6              	17.32%
                    	       		Q9RU28              	14.46%
                    	       		Q9RSD3              	13.04%
                    	       		Q9RZE2              	11.09%
                    	       		Q9RX42              	11.07%
                    	       		Q9RVU5              	8.59%
                    	       		Q9RS11              	8.28%
                    	       		Q9RYZ3              	8.04%
                    	       		Q9RU27              	7.68%
                    	       		Q9RXM7              	7.50%
                    	       		Q9RVL5              	7.19%
                    	       		Q9RSJ0              	6.96%
                    	       		Q9RSK5              	6.96%
                    	       		Q9RZR6              	6.79%
                    	       		Q9RYI8              	6.43%
                    	       		Q9RVJ3              	6.09%
                    	       		Q9RRL9              	5.36%
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for Q9RUM8 as seed ortholog is 74%.
Alternative seed ortholog is Q9RSL7 (21 bits away from this cluster)
Bootstrap support for Q9RXV1 as seed ortholog is 75%.

Group of orthologs #351. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 D.radiodurans:67

Q5KBM5              	100.00%		Q9RZP3              	100.00%
                    	       		Q9RYA6              	57.32%
                    	       		Q9RT94              	5.39%
Bootstrap support for Q5KBM5 as seed ortholog is 100%.
Bootstrap support for Q9RZP3 as seed ortholog is 100%.

Group of orthologs #352. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 D.radiodurans:66

Q5KC64              	100.00%		Q9RUJ1              	100.00%
Q5KG83              	100.00%		
Bootstrap support for Q5KC64 as seed ortholog is 100%.
Bootstrap support for Q5KG83 as seed ortholog is 100%.
Bootstrap support for Q9RUJ1 as seed ortholog is 100%.

Group of orthologs #353. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 D.radiodurans:66

Q5K844              	100.00%		Q9RRX9              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for Q9RRX9 as seed ortholog is 100%.

Group of orthologs #354. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 D.radiodurans:66

Q5K7S6              	100.00%		Q9RXY8              	100.00%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for Q9RXY8 as seed ortholog is 100%.

Group of orthologs #355. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 D.radiodurans:66

Q5KF07              	100.00%		Q9RSD0              	100.00%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for Q9RSD0 as seed ortholog is 100%.

Group of orthologs #356. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:4 D.radiodurans:66

Q5K9H2              	100.00%		Q9RXJ8              	100.00%
Bootstrap support for Q5K9H2 as seed ortholog is 57%.
Alternative seed ortholog is Q5KEX8 (4 bits away from this cluster)
Bootstrap support for Q9RXJ8 as seed ortholog is 100%.

Group of orthologs #357. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 D.radiodurans:66

Q5KGP8              	100.00%		Q9RSH5              	100.00%
Bootstrap support for Q5KGP8 as seed ortholog is 100%.
Bootstrap support for Q9RSH5 as seed ortholog is 100%.

Group of orthologs #358. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 D.radiodurans:65

Q5KI30              	100.00%		Q9RT27              	100.00%
Q5KI56              	12.50%		
Bootstrap support for Q5KI30 as seed ortholog is 100%.
Bootstrap support for Q9RT27 as seed ortholog is 100%.

Group of orthologs #359. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 D.radiodurans:65

Q5KPF3              	100.00%		Q9RXX6              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for Q9RXX6 as seed ortholog is 100%.

Group of orthologs #360. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:3 D.radiodurans:64

Q5K8M1              	100.00%		Q9RTB4              	100.00%
                    	       		Q9RUY7              	5.24%
Bootstrap support for Q5K8M1 as seed ortholog is 51%.
Alternative seed ortholog is Q5KDH2 (3 bits away from this cluster)
Bootstrap support for Q9RTB4 as seed ortholog is 100%.

Group of orthologs #361. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:14 D.radiodurans:64

Q5KM63              	100.00%		Q9RU57              	100.00%
                    	       		Q9RRG9              	41.18%
Bootstrap support for Q5KM63 as seed ortholog is 60%.
Alternative seed ortholog is Q5KNJ4 (14 bits away from this cluster)
Bootstrap support for Q9RU57 as seed ortholog is 100%.

Group of orthologs #362. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 D.radiodurans:64

Q5KIW7              	100.00%		Q9RU48              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for Q9RU48 as seed ortholog is 100%.

Group of orthologs #363. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 D.radiodurans:63

Q5KBT3              	100.00%		Q9RUL6              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for Q9RUL6 as seed ortholog is 100%.

Group of orthologs #364. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 D.radiodurans:63

Q5KPZ1              	100.00%		Q9RXJ6              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for Q9RXJ6 as seed ortholog is 100%.

Group of orthologs #365. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 D.radiodurans:62

Q5K9A9              	100.00%		Q9RZL6              	100.00%
Q5K9L8              	50.61%		
Bootstrap support for Q5K9A9 as seed ortholog is 100%.
Bootstrap support for Q9RZL6 as seed ortholog is 100%.

Group of orthologs #366. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:14 D.radiodurans:62

Q5KPC9              	100.00%		Q9RYD4              	100.00%
Q5KG84              	15.11%		
Bootstrap support for Q5KPC9 as seed ortholog is 65%.
Alternative seed ortholog is Q5KDH4 (14 bits away from this cluster)
Bootstrap support for Q9RYD4 as seed ortholog is 100%.

Group of orthologs #367. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 D.radiodurans:62

Q5KCC7              	100.00%		Q9RX22              	100.00%
Bootstrap support for Q5KCC7 as seed ortholog is 100%.
Bootstrap support for Q9RX22 as seed ortholog is 100%.

Group of orthologs #368. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 D.radiodurans:62

Q5KEZ0              	100.00%		Q9RW02              	100.00%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for Q9RW02 as seed ortholog is 100%.

Group of orthologs #369. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 D.radiodurans:62

Q5KDR0              	100.00%		Q9RXI8              	100.00%
Bootstrap support for Q5KDR0 as seed ortholog is 100%.
Bootstrap support for Q9RXI8 as seed ortholog is 100%.

Group of orthologs #370. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 D.radiodurans:6

Q5KJI8              	100.00%		Q9RUN5              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for Q9RUN5 as seed ortholog is 54%.
Alternative seed ortholog is Q9RUE3 (6 bits away from this cluster)

Group of orthologs #371. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 D.radiodurans:62

Q5KH50              	100.00%		Q9RY08              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for Q9RY08 as seed ortholog is 100%.

Group of orthologs #372. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 D.radiodurans:61

Q5KLN7              	100.00%		Q9RYD9              	100.00%
Q5KLN8              	60.25%		
Q5K866              	9.09%		
Bootstrap support for Q5KLN7 as seed ortholog is 100%.
Bootstrap support for Q9RYD9 as seed ortholog is 100%.

Group of orthologs #373. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:20 D.radiodurans:61

Q5KFR7              	100.00%		Q9RUJ3              	100.00%
                    	       		Q9RXN2              	14.49%
Bootstrap support for Q5KFR7 as seed ortholog is 75%.
Bootstrap support for Q9RUJ3 as seed ortholog is 100%.

Group of orthologs #374. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 D.radiodurans:61

Q5KH62              	100.00%		Q9RSQ3              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for Q9RSQ3 as seed ortholog is 100%.

Group of orthologs #375. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 D.radiodurans:60

Q5KN03              	100.00%		Q9RXC0              	100.00%
Q5K9W4              	7.34%		
Q5KNV1              	6.88%		
Q5KL87              	6.08%		
Q5KAC4              	5.39%		
Q5K7U4              	5.28%		
Bootstrap support for Q5KN03 as seed ortholog is 100%.
Bootstrap support for Q9RXC0 as seed ortholog is 100%.

Group of orthologs #376. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 D.radiodurans:60

Q5K8R3              	100.00%		Q9RS89              	100.00%
Q5KK52              	23.36%		
Bootstrap support for Q5K8R3 as seed ortholog is 100%.
Bootstrap support for Q9RS89 as seed ortholog is 100%.

Group of orthologs #377. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 D.radiodurans:60

Q5KKY6              	100.00%		Q9RY57              	100.00%
                    	       		Q9RYF5              	7.37%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for Q9RY57 as seed ortholog is 100%.

Group of orthologs #378. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 D.radiodurans:60

Q5K947              	100.00%		Q9RXK6              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for Q9RXK6 as seed ortholog is 100%.

Group of orthologs #379. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 D.radiodurans:59

Q5KFT0              	100.00%		Q9RSJ8              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for Q9RSJ8 as seed ortholog is 100%.

Group of orthologs #380. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 D.radiodurans:59

Q5KCY7              	100.00%		Q9RWR9              	100.00%
Bootstrap support for Q5KCY7 as seed ortholog is 100%.
Bootstrap support for Q9RWR9 as seed ortholog is 100%.

Group of orthologs #381. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 D.radiodurans:59

Q5KEW3              	100.00%		Q9RX10              	100.00%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for Q9RX10 as seed ortholog is 100%.

Group of orthologs #382. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 D.radiodurans:58

Q5K9G6              	100.00%		Q9RT08              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for Q9RT08 as seed ortholog is 100%.

Group of orthologs #383. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 D.radiodurans:58

Q5KQ65              	100.00%		Q9RTN4              	100.00%
Bootstrap support for Q5KQ65 as seed ortholog is 100%.
Bootstrap support for Q9RTN4 as seed ortholog is 100%.

Group of orthologs #384. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 D.radiodurans:57

Q5K9N4              	100.00%		Q9RUT7              	100.00%
Bootstrap support for Q5K9N4 as seed ortholog is 100%.
Bootstrap support for Q9RUT7 as seed ortholog is 100%.

Group of orthologs #385. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 D.radiodurans:56

Q5KDL9              	100.00%		P50933              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 100%.
Bootstrap support for P50933 as seed ortholog is 100%.

Group of orthologs #386. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 D.radiodurans:56

Q5KIL7              	100.00%		Q9RRD5              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for Q9RRD5 as seed ortholog is 100%.

Group of orthologs #387. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 D.radiodurans:56

Q5KPB1              	100.00%		Q9RTR6              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for Q9RTR6 as seed ortholog is 100%.

Group of orthologs #388. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 D.radiodurans:56

Q5KMB9              	100.00%		Q9RZB0              	100.00%
Bootstrap support for Q5KMB9 as seed ortholog is 100%.
Bootstrap support for Q9RZB0 as seed ortholog is 100%.

Group of orthologs #389. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 D.radiodurans:55

P0CS95              	100.00%		Q9RX68              	100.00%
Bootstrap support for P0CS95 as seed ortholog is 100%.
Bootstrap support for Q9RX68 as seed ortholog is 100%.

Group of orthologs #390. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 D.radiodurans:54

Q5K7N9              	100.00%		P42443              	100.00%
Q5KNC3              	42.37%		
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for P42443 as seed ortholog is 100%.

Group of orthologs #391. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 D.radiodurans:54

Q5KDB0              	100.00%		Q9RYT6              	100.00%
Q5KMZ1              	95.97%		
Bootstrap support for Q5KDB0 as seed ortholog is 100%.
Bootstrap support for Q9RYT6 as seed ortholog is 100%.

Group of orthologs #392. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 D.radiodurans:54

Q5K8M7              	100.00%		Q9RSJ9              	100.00%
Bootstrap support for Q5K8M7 as seed ortholog is 100%.
Bootstrap support for Q9RSJ9 as seed ortholog is 100%.

Group of orthologs #393. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 D.radiodurans:53

Q07801              	100.00%		Q9RR65              	100.00%
Bootstrap support for Q07801 as seed ortholog is 100%.
Bootstrap support for Q9RR65 as seed ortholog is 100%.

Group of orthologs #394. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 D.radiodurans:53

Q5K9E5              	100.00%		Q9RY24              	100.00%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for Q9RY24 as seed ortholog is 100%.

Group of orthologs #395. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 D.radiodurans:53

Q5KKY5              	100.00%		Q9RXK3              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for Q9RXK3 as seed ortholog is 100%.

Group of orthologs #396. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 D.radiodurans:52

Q5KJZ1              	100.00%		Q9RUR1              	100.00%
                    	       		Q9RTM3              	21.49%
                    	       		Q9RUF9              	20.95%
Bootstrap support for Q5KJZ1 as seed ortholog is 100%.
Bootstrap support for Q9RUR1 as seed ortholog is 100%.

Group of orthologs #397. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 D.radiodurans:51

Q5KAI0              	100.00%		Q9RV46              	100.00%
Bootstrap support for Q5KAI0 as seed ortholog is 100%.
Bootstrap support for Q9RV46 as seed ortholog is 100%.

Group of orthologs #398. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 D.radiodurans:51

Q5KLA4              	100.00%		Q9RTX9              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for Q9RTX9 as seed ortholog is 100%.

Group of orthologs #399. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:50

Q5K894              	100.00%		Q9RTS3              	100.00%
Bootstrap support for Q5K894 as seed ortholog is 100%.
Bootstrap support for Q9RTS3 as seed ortholog is 100%.

Group of orthologs #400. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:50

Q5KA90              	100.00%		Q9RSS4              	100.00%
Bootstrap support for Q5KA90 as seed ortholog is 100%.
Bootstrap support for Q9RSS4 as seed ortholog is 100%.

Group of orthologs #401. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:50

P0CM52              	100.00%		Q9RXF5              	100.00%
Bootstrap support for P0CM52 as seed ortholog is 100%.
Bootstrap support for Q9RXF5 as seed ortholog is 100%.

Group of orthologs #402. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:50

Q5KA22              	100.00%		Q9RUV8              	100.00%
Bootstrap support for Q5KA22 as seed ortholog is 100%.
Bootstrap support for Q9RUV8 as seed ortholog is 100%.

Group of orthologs #403. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:50

Q5KF31              	100.00%		Q9RUZ5              	100.00%
Bootstrap support for Q5KF31 as seed ortholog is 100%.
Bootstrap support for Q9RUZ5 as seed ortholog is 100%.

Group of orthologs #404. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 D.radiodurans:50

Q5KLP6              	100.00%		Q9RU82              	100.00%
Bootstrap support for Q5KLP6 as seed ortholog is 100%.
Bootstrap support for Q9RU82 as seed ortholog is 100%.

Group of orthologs #405. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 D.radiodurans:45

Q5KE88              	100.00%		Q9RWB0              	100.00%
Q5KGP5              	9.48%		
Bootstrap support for Q5KE88 as seed ortholog is 100%.
Bootstrap support for Q9RWB0 as seed ortholog is 100%.

Group of orthologs #406. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 D.radiodurans:45

Q5KMP7              	100.00%		Q9RR66              	100.00%
Bootstrap support for Q5KMP7 as seed ortholog is 100%.
Bootstrap support for Q9RR66 as seed ortholog is 100%.

Group of orthologs #407. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 D.radiodurans:44

Q5K7P3              	100.00%		Q9RUP0              	100.00%
Bootstrap support for Q5K7P3 as seed ortholog is 100%.
Bootstrap support for Q9RUP0 as seed ortholog is 100%.

Group of orthologs #408. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 D.radiodurans:44

Q5KAS2              	100.00%		Q9RX93              	100.00%
Bootstrap support for Q5KAS2 as seed ortholog is 100%.
Bootstrap support for Q9RX93 as seed ortholog is 100%.

Group of orthologs #409. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 D.radiodurans:43

Q5KCZ5              	100.00%		Q9RWB4              	100.00%
Bootstrap support for Q5KCZ5 as seed ortholog is 100%.
Bootstrap support for Q9RWB4 as seed ortholog is 100%.

Group of orthologs #410. Best score 41 bits
Score difference with first non-orthologous sequence - C.neoformans:41 D.radiodurans:41

Q5KDM7              	100.00%		Q9RYE3              	100.00%
Bootstrap support for Q5KDM7 as seed ortholog is 100%.
Bootstrap support for Q9RYE3 as seed ortholog is 100%.