###################################
457 groups of orthologs
699 in-paralogs from C.militaris
509 in-paralogs from Synechocystis.sp.
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1517 bits
Score difference with first non-orthologous sequence - C.militaris:1517 Synechocystis.sp.:335

G3JB11              	100.00%		P55037              	100.00%
Bootstrap support for G3JB11 as seed ortholog is 100%.
Bootstrap support for P55037 as seed ortholog is 100%.

Group of orthologs #2. Best score 897 bits
Score difference with first non-orthologous sequence - C.militaris:897 Synechocystis.sp.:897

G3JEZ4              	100.00%		P74416              	100.00%
Bootstrap support for G3JEZ4 as seed ortholog is 100%.
Bootstrap support for P74416 as seed ortholog is 100%.

Group of orthologs #3. Best score 870 bits
Score difference with first non-orthologous sequence - C.militaris:870 Synechocystis.sp.:870

G3JM20              	100.00%		Q55959              	100.00%
G3JJA9              	30.22%		
Bootstrap support for G3JM20 as seed ortholog is 100%.
Bootstrap support for Q55959 as seed ortholog is 100%.

Group of orthologs #4. Best score 835 bits
Score difference with first non-orthologous sequence - C.militaris:835 Synechocystis.sp.:835

G3JSY0              	100.00%		P73911              	100.00%
Bootstrap support for G3JSY0 as seed ortholog is 100%.
Bootstrap support for P73911 as seed ortholog is 100%.

Group of orthologs #5. Best score 766 bits
Score difference with first non-orthologous sequence - C.militaris:766 Synechocystis.sp.:766

G3JLR1              	100.00%		Q55756              	100.00%
Bootstrap support for G3JLR1 as seed ortholog is 100%.
Bootstrap support for Q55756 as seed ortholog is 100%.

Group of orthologs #6. Best score 761 bits
Score difference with first non-orthologous sequence - C.militaris:8 Synechocystis.sp.:132

G3JHM8              	100.00%		P74361              	100.00%
                    	       		P74459              	37.72%
Bootstrap support for G3JHM8 as seed ortholog is 55%.
Alternative seed ortholog is G3JQ05 (8 bits away from this cluster)
Bootstrap support for P74361 as seed ortholog is 99%.

Group of orthologs #7. Best score 732 bits
Score difference with first non-orthologous sequence - C.militaris:732 Synechocystis.sp.:732

G3JE01              	100.00%		P73511              	100.00%
Bootstrap support for G3JE01 as seed ortholog is 100%.
Bootstrap support for P73511 as seed ortholog is 100%.

Group of orthologs #8. Best score 724 bits
Score difference with first non-orthologous sequence - C.militaris:724 Synechocystis.sp.:724

G3J769              	100.00%		P73061              	100.00%
Bootstrap support for G3J769 as seed ortholog is 100%.
Bootstrap support for P73061 as seed ortholog is 100%.

Group of orthologs #9. Best score 680 bits
Score difference with first non-orthologous sequence - C.militaris:680 Synechocystis.sp.:623

G3J3L5              	100.00%		P73282              	100.00%
Bootstrap support for G3J3L5 as seed ortholog is 100%.
Bootstrap support for P73282 as seed ortholog is 100%.

Group of orthologs #10. Best score 667 bits
Score difference with first non-orthologous sequence - C.militaris:454 Synechocystis.sp.:667

G3JKE8              	100.00%		Q55522              	100.00%
Bootstrap support for G3JKE8 as seed ortholog is 100%.
Bootstrap support for Q55522 as seed ortholog is 100%.

Group of orthologs #11. Best score 644 bits
Score difference with first non-orthologous sequence - C.militaris:510 Synechocystis.sp.:644

G3JKM5              	100.00%		P73274              	100.00%
Bootstrap support for G3JKM5 as seed ortholog is 100%.
Bootstrap support for P73274 as seed ortholog is 100%.

Group of orthologs #12. Best score 641 bits
Score difference with first non-orthologous sequence - C.militaris:58 Synechocystis.sp.:641

G3JJ21              	100.00%		P22358              	100.00%
                    	       		P73098              	21.45%
                    	       		Q55154              	6.08%
Bootstrap support for G3JJ21 as seed ortholog is 90%.
Bootstrap support for P22358 as seed ortholog is 100%.

Group of orthologs #13. Best score 626 bits
Score difference with first non-orthologous sequence - C.militaris:509 Synechocystis.sp.:626

G3JPS3              	100.00%		P26527              	100.00%
Bootstrap support for G3JPS3 as seed ortholog is 100%.
Bootstrap support for P26527 as seed ortholog is 100%.

Group of orthologs #14. Best score 599 bits
Score difference with first non-orthologous sequence - C.militaris:253 Synechocystis.sp.:599

G3JSC5              	100.00%		Q55404              	100.00%
Bootstrap support for G3JSC5 as seed ortholog is 100%.
Bootstrap support for Q55404 as seed ortholog is 100%.

Group of orthologs #15. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:309 Synechocystis.sp.:577

G3JD46              	100.00%		P73505              	100.00%
Bootstrap support for G3JD46 as seed ortholog is 100%.
Bootstrap support for P73505 as seed ortholog is 100%.

Group of orthologs #16. Best score 556 bits
Score difference with first non-orthologous sequence - C.militaris:242 Synechocystis.sp.:303

G3JIB2              	100.00%		P74228              	100.00%
                    	       		P28371              	16.60%
Bootstrap support for G3JIB2 as seed ortholog is 99%.
Bootstrap support for P74228 as seed ortholog is 100%.

Group of orthologs #17. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:429 Synechocystis.sp.:554

G3JJ70              	100.00%		P27179              	100.00%
Bootstrap support for G3JJ70 as seed ortholog is 100%.
Bootstrap support for P27179 as seed ortholog is 100%.

Group of orthologs #18. Best score 552 bits
Score difference with first non-orthologous sequence - C.militaris:293 Synechocystis.sp.:552

G3JG68              	100.00%		P74689              	100.00%
G3JTH8              	14.26%		
Bootstrap support for G3JG68 as seed ortholog is 100%.
Bootstrap support for P74689 as seed ortholog is 100%.

Group of orthologs #19. Best score 533 bits
Score difference with first non-orthologous sequence - C.militaris:53 Synechocystis.sp.:376

G3JLH3              	100.00%		Q59999              	100.00%
                    	       		P74062              	36.50%
Bootstrap support for G3JLH3 as seed ortholog is 78%.
Bootstrap support for Q59999 as seed ortholog is 100%.

Group of orthologs #20. Best score 532 bits
Score difference with first non-orthologous sequence - C.militaris:433 Synechocystis.sp.:532

G3JFV6              	100.00%		P22034              	100.00%
                    	       		Q05972              	25.40%
Bootstrap support for G3JFV6 as seed ortholog is 100%.
Bootstrap support for P22034 as seed ortholog is 100%.

Group of orthologs #21. Best score 525 bits
Score difference with first non-orthologous sequence - C.militaris:525 Synechocystis.sp.:525

G3JAR3              	100.00%		Q55674              	100.00%
Bootstrap support for G3JAR3 as seed ortholog is 100%.
Bootstrap support for Q55674 as seed ortholog is 100%.

Group of orthologs #22. Best score 484 bits
Score difference with first non-orthologous sequence - C.militaris:326 Synechocystis.sp.:484

G3J4Q2              	100.00%		P74227              	100.00%
Bootstrap support for G3J4Q2 as seed ortholog is 100%.
Bootstrap support for P74227 as seed ortholog is 100%.

Group of orthologs #23. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:94 Synechocystis.sp.:483

G3J955              	100.00%		P73437              	100.00%
                    	       		P72991              	8.54%
Bootstrap support for G3J955 as seed ortholog is 97%.
Bootstrap support for P73437 as seed ortholog is 100%.

Group of orthologs #24. Best score 472 bits
Score difference with first non-orthologous sequence - C.militaris:375 Synechocystis.sp.:472

G3J7P3              	100.00%		P73375              	100.00%
Bootstrap support for G3J7P3 as seed ortholog is 100%.
Bootstrap support for P73375 as seed ortholog is 100%.

Group of orthologs #25. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:355 Synechocystis.sp.:233

G3J9B6              	100.00%		P73479              	100.00%
Bootstrap support for G3J9B6 as seed ortholog is 100%.
Bootstrap support for P73479 as seed ortholog is 100%.

Group of orthologs #26. Best score 464 bits
Score difference with first non-orthologous sequence - C.militaris:464 Synechocystis.sp.:464

G3JPY3              	100.00%		Q59992              	100.00%
Bootstrap support for G3JPY3 as seed ortholog is 100%.
Bootstrap support for Q59992 as seed ortholog is 100%.

Group of orthologs #27. Best score 457 bits
Score difference with first non-orthologous sequence - C.militaris:457 Synechocystis.sp.:457

G3JJY0              	100.00%		P74423              	100.00%
Bootstrap support for G3JJY0 as seed ortholog is 100%.
Bootstrap support for P74423 as seed ortholog is 100%.

Group of orthologs #28. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 Synechocystis.sp.:455

G3JHB6              	100.00%		Q55694              	100.00%
Bootstrap support for G3JHB6 as seed ortholog is 100%.
Bootstrap support for Q55694 as seed ortholog is 100%.

Group of orthologs #29. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 Synechocystis.sp.:350

G3JN91              	100.00%		P74751              	100.00%
Bootstrap support for G3JN91 as seed ortholog is 100%.
Bootstrap support for P74751 as seed ortholog is 100%.

Group of orthologs #30. Best score 453 bits
Score difference with first non-orthologous sequence - C.militaris:324 Synechocystis.sp.:453

G3JDY3              	100.00%		P54384              	100.00%
Bootstrap support for G3JDY3 as seed ortholog is 100%.
Bootstrap support for P54384 as seed ortholog is 100%.

Group of orthologs #31. Best score 449 bits
Score difference with first non-orthologous sequence - C.militaris:307 Synechocystis.sp.:449

G3JT06              	100.00%		P73138              	100.00%
Bootstrap support for G3JT06 as seed ortholog is 100%.
Bootstrap support for P73138 as seed ortholog is 100%.

Group of orthologs #32. Best score 446 bits
Score difference with first non-orthologous sequence - C.militaris:446 Synechocystis.sp.:446

G3JL79              	100.00%		P52208              	100.00%
Bootstrap support for G3JL79 as seed ortholog is 100%.
Bootstrap support for P52208 as seed ortholog is 100%.

Group of orthologs #33. Best score 435 bits
Score difference with first non-orthologous sequence - C.militaris:340 Synechocystis.sp.:203

G3J578              	100.00%		P73913              	100.00%
Bootstrap support for G3J578 as seed ortholog is 100%.
Bootstrap support for P73913 as seed ortholog is 99%.

Group of orthologs #34. Best score 428 bits
Score difference with first non-orthologous sequence - C.militaris:50 Synechocystis.sp.:185

G3JK92              	100.00%		P73241              	100.00%
                    	       		P74512              	7.04%
Bootstrap support for G3JK92 as seed ortholog is 76%.
Bootstrap support for P73241 as seed ortholog is 99%.

Group of orthologs #35. Best score 426 bits
Score difference with first non-orthologous sequence - C.militaris:339 Synechocystis.sp.:426

G3JSS2              	100.00%		P73043              	100.00%
Bootstrap support for G3JSS2 as seed ortholog is 100%.
Bootstrap support for P73043 as seed ortholog is 100%.

Group of orthologs #36. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:254 Synechocystis.sp.:418

G3J440              	100.00%		P72689              	100.00%
Bootstrap support for G3J440 as seed ortholog is 100%.
Bootstrap support for P72689 as seed ortholog is 100%.

Group of orthologs #37. Best score 411 bits
Score difference with first non-orthologous sequence - C.militaris:411 Synechocystis.sp.:411

G3JBF3              	100.00%		P49057              	100.00%
Bootstrap support for G3JBF3 as seed ortholog is 100%.
Bootstrap support for P49057 as seed ortholog is 100%.

Group of orthologs #38. Best score 396 bits
Score difference with first non-orthologous sequence - C.militaris:396 Synechocystis.sp.:396

G3JN58              	100.00%		P77972              	100.00%
Bootstrap support for G3JN58 as seed ortholog is 100%.
Bootstrap support for P77972 as seed ortholog is 100%.

Group of orthologs #39. Best score 395 bits
Score difference with first non-orthologous sequence - C.militaris:395 Synechocystis.sp.:82

G3JFU3              	100.00%		P49433              	100.00%
Bootstrap support for G3JFU3 as seed ortholog is 100%.
Bootstrap support for P49433 as seed ortholog is 99%.

Group of orthologs #40. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 Synechocystis.sp.:393

G3JAP4              	100.00%		Q55160              	100.00%
Bootstrap support for G3JAP4 as seed ortholog is 100%.
Bootstrap support for Q55160 as seed ortholog is 100%.

Group of orthologs #41. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:379 Synechocystis.sp.:379

G3JFT1              	100.00%		P74208              	100.00%
Bootstrap support for G3JFT1 as seed ortholog is 100%.
Bootstrap support for P74208 as seed ortholog is 100%.

Group of orthologs #42. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:378 Synechocystis.sp.:245

G3JC02              	100.00%		P54902              	100.00%
Bootstrap support for G3JC02 as seed ortholog is 100%.
Bootstrap support for P54902 as seed ortholog is 100%.

Group of orthologs #43. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:376 Synechocystis.sp.:376

G3J7U6              	100.00%		P74507              	100.00%
Bootstrap support for G3J7U6 as seed ortholog is 100%.
Bootstrap support for P74507 as seed ortholog is 100%.

Group of orthologs #44. Best score 370 bits
Score difference with first non-orthologous sequence - C.militaris:91 Synechocystis.sp.:370

G3J5A8              	100.00%		P72662              	100.00%
Bootstrap support for G3J5A8 as seed ortholog is 99%.
Bootstrap support for P72662 as seed ortholog is 100%.

Group of orthologs #45. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 Synechocystis.sp.:369

G3JT79              	100.00%		P74421              	100.00%
Bootstrap support for G3JT79 as seed ortholog is 100%.
Bootstrap support for P74421 as seed ortholog is 100%.

Group of orthologs #46. Best score 368 bits
Score difference with first non-orthologous sequence - C.militaris:163 Synechocystis.sp.:368

G3JHT4              	100.00%		P73821              	100.00%
Bootstrap support for G3JHT4 as seed ortholog is 99%.
Bootstrap support for P73821 as seed ortholog is 100%.

Group of orthologs #47. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:366 Synechocystis.sp.:366

G3J905              	100.00%		P72871              	100.00%
Bootstrap support for G3J905 as seed ortholog is 100%.
Bootstrap support for P72871 as seed ortholog is 100%.

Group of orthologs #48. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:366 Synechocystis.sp.:366

G3JLN9              	100.00%		P72720              	100.00%
Bootstrap support for G3JLN9 as seed ortholog is 100%.
Bootstrap support for P72720 as seed ortholog is 100%.

Group of orthologs #49. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:127 Synechocystis.sp.:356

G3J6C9              	100.00%		P73443              	100.00%
Bootstrap support for G3J6C9 as seed ortholog is 99%.
Bootstrap support for P73443 as seed ortholog is 100%.

Group of orthologs #50. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 Synechocystis.sp.:356

G3JKF3              	100.00%		Q55528              	100.00%
Bootstrap support for G3JKF3 as seed ortholog is 100%.
Bootstrap support for Q55528 as seed ortholog is 100%.

Group of orthologs #51. Best score 350 bits
Score difference with first non-orthologous sequence - C.militaris:237 Synechocystis.sp.:350

G3J7R4              	100.00%		P23353              	100.00%
Bootstrap support for G3J7R4 as seed ortholog is 100%.
Bootstrap support for P23353 as seed ortholog is 100%.

Group of orthologs #52. Best score 343 bits
Score difference with first non-orthologous sequence - C.militaris:343 Synechocystis.sp.:343

G3J9N3              	100.00%		P73257              	100.00%
G3JPH6              	44.98%		
Bootstrap support for G3J9N3 as seed ortholog is 100%.
Bootstrap support for P73257 as seed ortholog is 100%.

Group of orthologs #53. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 Synechocystis.sp.:339

G3JLF5              	100.00%		Q55806              	100.00%
Bootstrap support for G3JLF5 as seed ortholog is 100%.
Bootstrap support for Q55806 as seed ortholog is 100%.

Group of orthologs #54. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:262 Synechocystis.sp.:337

G3J705              	100.00%		P74260              	100.00%
Bootstrap support for G3J705 as seed ortholog is 100%.
Bootstrap support for P74260 as seed ortholog is 100%.

Group of orthologs #55. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:132 Synechocystis.sp.:337

G3JHE0              	100.00%		P74232              	100.00%
Bootstrap support for G3JHE0 as seed ortholog is 99%.
Bootstrap support for P74232 as seed ortholog is 100%.

Group of orthologs #56. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:336 Synechocystis.sp.:336

G3JMA0              	100.00%		P74008              	100.00%
Bootstrap support for G3JMA0 as seed ortholog is 100%.
Bootstrap support for P74008 as seed ortholog is 100%.

Group of orthologs #57. Best score 335 bits
Score difference with first non-orthologous sequence - C.militaris:335 Synechocystis.sp.:335

G3JNR9              	100.00%		P73035              	100.00%
Bootstrap support for G3JNR9 as seed ortholog is 100%.
Bootstrap support for P73035 as seed ortholog is 100%.

Group of orthologs #58. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 Synechocystis.sp.:334

G3J4E2              	100.00%		P77962              	100.00%
G3J605              	100.00%		
Bootstrap support for G3J4E2 as seed ortholog is 100%.
Bootstrap support for G3J605 as seed ortholog is 100%.
Bootstrap support for P77962 as seed ortholog is 100%.

Group of orthologs #59. Best score 330 bits
Score difference with first non-orthologous sequence - C.militaris:248 Synechocystis.sp.:330

G3JA32              	100.00%		P72797              	100.00%
Bootstrap support for G3JA32 as seed ortholog is 100%.
Bootstrap support for P72797 as seed ortholog is 100%.

Group of orthologs #60. Best score 319 bits
Score difference with first non-orthologous sequence - C.militaris:319 Synechocystis.sp.:319

G3JLI9              	100.00%		P73411              	100.00%
Bootstrap support for G3JLI9 as seed ortholog is 100%.
Bootstrap support for P73411 as seed ortholog is 100%.

Group of orthologs #61. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:312 Synechocystis.sp.:312

G3JKA1              	100.00%		P74741              	100.00%
Bootstrap support for G3JKA1 as seed ortholog is 100%.
Bootstrap support for P74741 as seed ortholog is 100%.

Group of orthologs #62. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:309 Synechocystis.sp.:309

G3J844              	100.00%		P74686              	100.00%
G3JRL0              	12.63%		
Bootstrap support for G3J844 as seed ortholog is 100%.
Bootstrap support for P74686 as seed ortholog is 100%.

Group of orthologs #63. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 Synechocystis.sp.:304

G3JKX6              	100.00%		P73290              	100.00%
G3JQS5              	27.99%		
Bootstrap support for G3JKX6 as seed ortholog is 100%.
Bootstrap support for P73290 as seed ortholog is 100%.

Group of orthologs #64. Best score 303 bits
Score difference with first non-orthologous sequence - C.militaris:303 Synechocystis.sp.:303

G3J8Q7              	100.00%		P27724              	100.00%
Bootstrap support for G3J8Q7 as seed ortholog is 100%.
Bootstrap support for P27724 as seed ortholog is 100%.

Group of orthologs #65. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:212 Synechocystis.sp.:300

G3J7I6              	100.00%		P73283              	100.00%
Bootstrap support for G3J7I6 as seed ortholog is 100%.
Bootstrap support for P73283 as seed ortholog is 100%.

Group of orthologs #66. Best score 299 bits
Score difference with first non-orthologous sequence - C.militaris:181 Synechocystis.sp.:299

G3J7N1              	100.00%		Q55081              	100.00%
Bootstrap support for G3J7N1 as seed ortholog is 99%.
Bootstrap support for Q55081 as seed ortholog is 100%.

Group of orthologs #67. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:297 Synechocystis.sp.:297

G3JQQ9              	100.00%		Q55983              	100.00%
Bootstrap support for G3JQQ9 as seed ortholog is 100%.
Bootstrap support for Q55983 as seed ortholog is 100%.

Group of orthologs #68. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:295 Synechocystis.sp.:295

G3JAU2              	100.00%		P73071              	100.00%
Bootstrap support for G3JAU2 as seed ortholog is 100%.
Bootstrap support for P73071 as seed ortholog is 100%.

Group of orthologs #69. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:155 Synechocystis.sp.:295

G3J8E3              	100.00%		Q55811              	100.00%
Bootstrap support for G3J8E3 as seed ortholog is 99%.
Bootstrap support for Q55811 as seed ortholog is 100%.

Group of orthologs #70. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 Synechocystis.sp.:229

G3JGB3              	100.00%		P73465              	100.00%
Bootstrap support for G3JGB3 as seed ortholog is 100%.
Bootstrap support for P73465 as seed ortholog is 99%.

Group of orthologs #71. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:292 Synechocystis.sp.:292

G3J7M3              	100.00%		Q55413              	100.00%
Bootstrap support for G3J7M3 as seed ortholog is 100%.
Bootstrap support for Q55413 as seed ortholog is 100%.

Group of orthologs #72. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:292 Synechocystis.sp.:292

G3JPY0              	100.00%		P72848              	100.00%
Bootstrap support for G3JPY0 as seed ortholog is 100%.
Bootstrap support for P72848 as seed ortholog is 100%.

Group of orthologs #73. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:33 Synechocystis.sp.:219

G3JSS1              	100.00%		P73133              	100.00%
Bootstrap support for G3JSS1 as seed ortholog is 79%.
Bootstrap support for P73133 as seed ortholog is 100%.

Group of orthologs #74. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:290 Synechocystis.sp.:67

G3JSB2              	100.00%		P20170              	100.00%
Bootstrap support for G3JSB2 as seed ortholog is 100%.
Bootstrap support for P20170 as seed ortholog is 86%.

Group of orthologs #75. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 Synechocystis.sp.:289

G3J7Z2              	100.00%		P74240              	100.00%
Bootstrap support for G3J7Z2 as seed ortholog is 100%.
Bootstrap support for P74240 as seed ortholog is 100%.

Group of orthologs #76. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 Synechocystis.sp.:288

G3JDV4              	100.00%		P73556              	100.00%
G3J971              	50.32%		
Bootstrap support for G3JDV4 as seed ortholog is 100%.
Bootstrap support for P73556 as seed ortholog is 100%.

Group of orthologs #77. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:135 Synechocystis.sp.:287

G3J4P5              	100.00%		P52276              	100.00%
Bootstrap support for G3J4P5 as seed ortholog is 99%.
Bootstrap support for P52276 as seed ortholog is 100%.

Group of orthologs #78. Best score 286 bits
Score difference with first non-orthologous sequence - C.militaris:286 Synechocystis.sp.:286

G3JIK5              	100.00%		P73534              	100.00%
                    	       		Q55863              	11.08%
Bootstrap support for G3JIK5 as seed ortholog is 100%.
Bootstrap support for P73534 as seed ortholog is 100%.

Group of orthologs #79. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:38 Synechocystis.sp.:285

G3JKI4              	100.00%		P73769              	100.00%
Bootstrap support for G3JKI4 as seed ortholog is 82%.
Bootstrap support for P73769 as seed ortholog is 100%.

Group of orthologs #80. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:130 Synechocystis.sp.:284

G3JII2              	100.00%		P73558              	100.00%
Bootstrap support for G3JII2 as seed ortholog is 99%.
Bootstrap support for P73558 as seed ortholog is 100%.

Group of orthologs #81. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:92 Synechocystis.sp.:283

G3JDK6              	100.00%		P73758              	100.00%
G3JLY8              	6.97%		
Bootstrap support for G3JDK6 as seed ortholog is 98%.
Bootstrap support for P73758 as seed ortholog is 100%.

Group of orthologs #82. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:149 Synechocystis.sp.:282

G3JP51              	100.00%		Q55729              	100.00%
Bootstrap support for G3JP51 as seed ortholog is 99%.
Bootstrap support for Q55729 as seed ortholog is 100%.

Group of orthologs #83. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:174 Synechocystis.sp.:281

G3J8X8              	100.00%		Q59977              	100.00%
Bootstrap support for G3J8X8 as seed ortholog is 99%.
Bootstrap support for Q59977 as seed ortholog is 100%.

Group of orthologs #84. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:53 Synechocystis.sp.:280

G3J6T5              	100.00%		P74072              	100.00%
G3JR00              	6.14%		
G3JHJ1              	5.19%		
Bootstrap support for G3J6T5 as seed ortholog is 91%.
Bootstrap support for P74072 as seed ortholog is 100%.

Group of orthologs #85. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 Synechocystis.sp.:280

G3J3M4              	100.00%		P74024              	100.00%
Bootstrap support for G3J3M4 as seed ortholog is 100%.
Bootstrap support for P74024 as seed ortholog is 100%.

Group of orthologs #86. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:9 Synechocystis.sp.:279

G3JJ39              	100.00%		P73340              	100.00%
Bootstrap support for G3JJ39 as seed ortholog is 53%.
Alternative seed ortholog is G3J4B3 (9 bits away from this cluster)
Bootstrap support for P73340 as seed ortholog is 100%.

Group of orthologs #87. Best score 278 bits
Score difference with first non-orthologous sequence - C.militaris:278 Synechocystis.sp.:278

G3JQ73              	100.00%		P74752              	100.00%
Bootstrap support for G3JQ73 as seed ortholog is 100%.
Bootstrap support for P74752 as seed ortholog is 100%.

Group of orthologs #88. Best score 273 bits
Score difference with first non-orthologous sequence - C.militaris:273 Synechocystis.sp.:24

G3JNN2              	100.00%		Q6ZEV8              	100.00%
Bootstrap support for G3JNN2 as seed ortholog is 100%.
Bootstrap support for Q6ZEV8 as seed ortholog is 75%.

Group of orthologs #89. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:187 Synechocystis.sp.:272

G3JN44              	100.00%		P73942              	100.00%
Bootstrap support for G3JN44 as seed ortholog is 100%.
Bootstrap support for P73942 as seed ortholog is 100%.

Group of orthologs #90. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 Synechocystis.sp.:117

G3J566              	100.00%		P74176              	100.00%
Bootstrap support for G3J566 as seed ortholog is 100%.
Bootstrap support for P74176 as seed ortholog is 99%.

Group of orthologs #91. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 Synechocystis.sp.:112

G3JI14              	100.00%		P73239              	100.00%
G3J7E2              	10.87%		
Bootstrap support for G3JI14 as seed ortholog is 100%.
Bootstrap support for P73239 as seed ortholog is 99%.

Group of orthologs #92. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 Synechocystis.sp.:81

G3JDC6              	100.00%		P73533              	100.00%
G3JQS0              	35.87%		P73400              	10.03%
Bootstrap support for G3JDC6 as seed ortholog is 100%.
Bootstrap support for P73533 as seed ortholog is 97%.

Group of orthologs #93. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:14 Synechocystis.sp.:265

G3J4Y8              	100.00%		Q55804              	100.00%
G3JP92              	50.00%		
Bootstrap support for G3J4Y8 as seed ortholog is 34%.
Alternative seed ortholog is G3JUA9 (14 bits away from this cluster)
Bootstrap support for Q55804 as seed ortholog is 100%.

Group of orthologs #94. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 Synechocystis.sp.:264

G3JGM3              	100.00%		Q55848              	100.00%
G3JA59              	10.35%		
Bootstrap support for G3JGM3 as seed ortholog is 100%.
Bootstrap support for Q55848 as seed ortholog is 100%.

Group of orthologs #95. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:263 Synechocystis.sp.:263

G3J9K3              	100.00%		P77973              	100.00%
Bootstrap support for G3J9K3 as seed ortholog is 100%.
Bootstrap support for P77973 as seed ortholog is 100%.

Group of orthologs #96. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 Synechocystis.sp.:262

G3JRK9              	100.00%		P73405              	100.00%
Bootstrap support for G3JRK9 as seed ortholog is 100%.
Bootstrap support for P73405 as seed ortholog is 100%.

Group of orthologs #97. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 Synechocystis.sp.:262

G3JSJ1              	100.00%		P74330              	100.00%
Bootstrap support for G3JSJ1 as seed ortholog is 100%.
Bootstrap support for P74330 as seed ortholog is 100%.

Group of orthologs #98. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 Synechocystis.sp.:261

G3J9I1              	100.00%		P74122              	100.00%
Bootstrap support for G3J9I1 as seed ortholog is 100%.
Bootstrap support for P74122 as seed ortholog is 100%.

Group of orthologs #99. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:76 Synechocystis.sp.:59

G3J3U0              	100.00%		P72740              	100.00%
Bootstrap support for G3J3U0 as seed ortholog is 96%.
Bootstrap support for P72740 as seed ortholog is 89%.

Group of orthologs #100. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:254 Synechocystis.sp.:254

G3JMC6              	100.00%		P74241              	100.00%
Bootstrap support for G3JMC6 as seed ortholog is 100%.
Bootstrap support for P74241 as seed ortholog is 100%.

Group of orthologs #101. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 Synechocystis.sp.:252

G3J5S1              	100.00%		P73886              	100.00%
Bootstrap support for G3J5S1 as seed ortholog is 100%.
Bootstrap support for P73886 as seed ortholog is 100%.

Group of orthologs #102. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:75 Synechocystis.sp.:252

G3JU78              	100.00%		P73660              	100.00%
Bootstrap support for G3JU78 as seed ortholog is 98%.
Bootstrap support for P73660 as seed ortholog is 100%.

Group of orthologs #103. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 Synechocystis.sp.:250

G3JN95              	100.00%		P77965              	100.00%
G3JEV3              	15.69%		
Bootstrap support for G3JN95 as seed ortholog is 100%.
Bootstrap support for P77965 as seed ortholog is 100%.

Group of orthologs #104. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:95 Synechocystis.sp.:250

G3JCN5              	100.00%		P73960              	100.00%
Bootstrap support for G3JCN5 as seed ortholog is 99%.
Bootstrap support for P73960 as seed ortholog is 100%.

Group of orthologs #105. Best score 249 bits
Score difference with first non-orthologous sequence - C.militaris:249 Synechocystis.sp.:249

G3JIR9              	100.00%		P74214              	100.00%
Bootstrap support for G3JIR9 as seed ortholog is 100%.
Bootstrap support for P74214 as seed ortholog is 100%.

Group of orthologs #106. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 Synechocystis.sp.:248

G3JP16              	100.00%		P73828              	100.00%
                    	       		Q6ZES0              	16.92%
                    	       		P73926              	5.55%
Bootstrap support for G3JP16 as seed ortholog is 100%.
Bootstrap support for P73828 as seed ortholog is 100%.

Group of orthologs #107. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:91 Synechocystis.sp.:248

G3J7T8              	100.00%		P74258              	100.00%
Bootstrap support for G3J7T8 as seed ortholog is 98%.
Bootstrap support for P74258 as seed ortholog is 100%.

Group of orthologs #108. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:74 Synechocystis.sp.:247

G3JBM9              	100.00%		P73421              	100.00%
Bootstrap support for G3JBM9 as seed ortholog is 95%.
Bootstrap support for P73421 as seed ortholog is 100%.

Group of orthologs #109. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 Synechocystis.sp.:245

G3J7L7              	100.00%		P73510              	100.00%
G3JSF4              	9.60%		
G3JS32              	8.48%		
Bootstrap support for G3J7L7 as seed ortholog is 100%.
Bootstrap support for P73510 as seed ortholog is 100%.

Group of orthologs #110. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:40 Synechocystis.sp.:244

G3JQW3              	100.00%		P73825              	100.00%
G3JJB5              	14.29%		
Bootstrap support for G3JQW3 as seed ortholog is 81%.
Bootstrap support for P73825 as seed ortholog is 100%.

Group of orthologs #111. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 Synechocystis.sp.:243

G3JFE3              	100.00%		P0DJF8              	100.00%
Bootstrap support for G3JFE3 as seed ortholog is 100%.
Bootstrap support for P0DJF8 as seed ortholog is 100%.

Group of orthologs #112. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:181 Synechocystis.sp.:147

G3J4C0              	100.00%		P72580              	100.00%
Bootstrap support for G3J4C0 as seed ortholog is 99%.
Bootstrap support for P72580 as seed ortholog is 99%.

Group of orthologs #113. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:99 Synechocystis.sp.:193

G3JNK4              	100.00%		P73410              	100.00%
Bootstrap support for G3JNK4 as seed ortholog is 99%.
Bootstrap support for P73410 as seed ortholog is 100%.

Group of orthologs #114. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:48 Synechocystis.sp.:238

G3JDL8              	100.00%		P74468              	100.00%
Bootstrap support for G3JDL8 as seed ortholog is 88%.
Bootstrap support for P74468 as seed ortholog is 100%.

Group of orthologs #115. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 Synechocystis.sp.:238

G3JDS9              	100.00%		P74587              	100.00%
Bootstrap support for G3JDS9 as seed ortholog is 100%.
Bootstrap support for P74587 as seed ortholog is 100%.

Group of orthologs #116. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 Synechocystis.sp.:237

G3J702              	100.00%		P74257              	100.00%
G3JPT6              	36.04%		
Bootstrap support for G3J702 as seed ortholog is 100%.
Bootstrap support for P74257 as seed ortholog is 100%.

Group of orthologs #117. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:93 Synechocystis.sp.:134

G3J8I4              	100.00%		Q55505              	100.00%
Bootstrap support for G3J8I4 as seed ortholog is 95%.
Bootstrap support for Q55505 as seed ortholog is 99%.

Group of orthologs #118. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 Synechocystis.sp.:235

G3J725              	100.00%		P72955              	100.00%
Bootstrap support for G3J725 as seed ortholog is 100%.
Bootstrap support for P72955 as seed ortholog is 100%.

Group of orthologs #119. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 Synechocystis.sp.:235

G3JNC8              	100.00%		P73348              	100.00%
Bootstrap support for G3JNC8 as seed ortholog is 100%.
Bootstrap support for P73348 as seed ortholog is 100%.

Group of orthologs #120. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:89 Synechocystis.sp.:233

G3J615              	100.00%		P77967              	100.00%
Bootstrap support for G3J615 as seed ortholog is 95%.
Bootstrap support for P77967 as seed ortholog is 100%.

Group of orthologs #121. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:2 Synechocystis.sp.:232

G3JJL2              	100.00%		Q55585              	100.00%
G3JNC3              	100.00%		
G3J7H6              	46.47%		
G3JH11              	26.50%		
G3JHW4              	25.83%		
G3JRP1              	17.49%		
G3J6L6              	7.56%		
G3J476              	7.27%		
Bootstrap support for G3JJL2 as seed ortholog is 48%.
Alternative seed ortholog is G3JJD2 (2 bits away from this cluster)
Bootstrap support for G3JNC3 as seed ortholog is 48%.
Alternative seed ortholog is G3JJD2 (2 bits away from this cluster)
Bootstrap support for Q55585 as seed ortholog is 100%.

Group of orthologs #122. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:88 Synechocystis.sp.:232

G3JQ79              	100.00%		P74571              	100.00%
G3J6U4              	48.39%		
G3JRU0              	13.03%		
G3JPN6              	11.59%		
G3JR07              	9.14%		
G3JIM3              	7.61%		
Bootstrap support for G3JQ79 as seed ortholog is 89%.
Bootstrap support for P74571 as seed ortholog is 100%.

Group of orthologs #123. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 Synechocystis.sp.:229

G3JF75              	100.00%		P73572              	100.00%
                    	       		P72980              	6.09%
Bootstrap support for G3JF75 as seed ortholog is 100%.
Bootstrap support for P73572 as seed ortholog is 100%.

Group of orthologs #124. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 Synechocystis.sp.:229

G3J6F1              	100.00%		P74497              	100.00%
Bootstrap support for G3J6F1 as seed ortholog is 100%.
Bootstrap support for P74497 as seed ortholog is 100%.

Group of orthologs #125. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:62 Synechocystis.sp.:136

G3J6T6              	100.00%		Q55124              	100.00%
G3J9R6              	25.72%		
Bootstrap support for G3J6T6 as seed ortholog is 92%.
Bootstrap support for Q55124 as seed ortholog is 99%.

Group of orthologs #126. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 Synechocystis.sp.:227

G3JHA7              	100.00%		P73655              	100.00%
Bootstrap support for G3JHA7 as seed ortholog is 100%.
Bootstrap support for P73655 as seed ortholog is 100%.

Group of orthologs #127. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:124 Synechocystis.sp.:225

G3J357              	100.00%		P73851              	100.00%
Bootstrap support for G3J357 as seed ortholog is 99%.
Bootstrap support for P73851 as seed ortholog is 100%.

Group of orthologs #128. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 Synechocystis.sp.:223

G3J7A9              	100.00%		P77969              	100.00%
Bootstrap support for G3J7A9 as seed ortholog is 100%.
Bootstrap support for P77969 as seed ortholog is 100%.

Group of orthologs #129. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 Synechocystis.sp.:223

G3JDI4              	100.00%		P73248              	100.00%
Bootstrap support for G3JDI4 as seed ortholog is 100%.
Bootstrap support for P73248 as seed ortholog is 100%.

Group of orthologs #130. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:139 Synechocystis.sp.:221

G3J3L1              	100.00%		P74324              	100.00%
Bootstrap support for G3J3L1 as seed ortholog is 99%.
Bootstrap support for P74324 as seed ortholog is 100%.

Group of orthologs #131. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 Synechocystis.sp.:219

G3J7T3              	100.00%		P74215              	100.00%
Bootstrap support for G3J7T3 as seed ortholog is 100%.
Bootstrap support for P74215 as seed ortholog is 100%.

Group of orthologs #132. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:138 Synechocystis.sp.:62

G3JIA7              	100.00%		P53579              	100.00%
G3JFI0              	38.65%		P53580              	38.85%
Bootstrap support for G3JIA7 as seed ortholog is 99%.
Bootstrap support for P53579 as seed ortholog is 98%.

Group of orthologs #133. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:10 Synechocystis.sp.:149

G3J6N5              	100.00%		P73789              	100.00%
Bootstrap support for G3J6N5 as seed ortholog is 63%.
Alternative seed ortholog is G3J7K6 (10 bits away from this cluster)
Bootstrap support for P73789 as seed ortholog is 100%.

Group of orthologs #134. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:21 Synechocystis.sp.:163

G3J6J5              	100.00%		P74308              	100.00%
G3JMV9              	21.05%		
Bootstrap support for G3J6J5 as seed ortholog is 69%.
Alternative seed ortholog is G3JPI1 (21 bits away from this cluster)
Bootstrap support for P74308 as seed ortholog is 99%.

Group of orthologs #135. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 Synechocystis.sp.:216

G3J8A8              	100.00%		P72931              	100.00%
Bootstrap support for G3J8A8 as seed ortholog is 100%.
Bootstrap support for P72931 as seed ortholog is 100%.

Group of orthologs #136. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 Synechocystis.sp.:216

G3JTC3              	100.00%		P73622              	100.00%
Bootstrap support for G3JTC3 as seed ortholog is 100%.
Bootstrap support for P73622 as seed ortholog is 100%.

Group of orthologs #137. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:26 Synechocystis.sp.:215

G3JQX8              	100.00%		P15729              	100.00%
G3JKU9              	26.24%		
G3JFJ8              	14.29%		
G3JBK6              	11.32%		
G3J3I1              	10.16%		
G3JH12              	7.41%		
Bootstrap support for G3JQX8 as seed ortholog is 68%.
Alternative seed ortholog is G3J5L8 (26 bits away from this cluster)
Bootstrap support for P15729 as seed ortholog is 100%.

Group of orthologs #138. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 Synechocystis.sp.:215

G3JSH8              	100.00%		P74015              	100.00%
                    	       		P72791              	13.47%
Bootstrap support for G3JSH8 as seed ortholog is 100%.
Bootstrap support for P74015 as seed ortholog is 100%.

Group of orthologs #139. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 Synechocystis.sp.:212

G3JCB6              	100.00%		Q55759              	100.00%
Bootstrap support for G3JCB6 as seed ortholog is 100%.
Bootstrap support for Q55759 as seed ortholog is 100%.

Group of orthologs #140. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 Synechocystis.sp.:211

G3J5M8              	100.00%		P73137              	100.00%
Bootstrap support for G3J5M8 as seed ortholog is 100%.
Bootstrap support for P73137 as seed ortholog is 100%.

Group of orthologs #141. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 Synechocystis.sp.:124

G3JU51              	100.00%		Q55135              	100.00%
Bootstrap support for G3JU51 as seed ortholog is 100%.
Bootstrap support for Q55135 as seed ortholog is 99%.

Group of orthologs #142. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 Synechocystis.sp.:210

G3JS46              	100.00%		Q55621              	100.00%
Bootstrap support for G3JS46 as seed ortholog is 100%.
Bootstrap support for Q55621 as seed ortholog is 100%.

Group of orthologs #143. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:67 Synechocystis.sp.:209

G3JGW6              	100.00%		P74510              	100.00%
Bootstrap support for G3JGW6 as seed ortholog is 93%.
Bootstrap support for P74510 as seed ortholog is 100%.

Group of orthologs #144. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 Synechocystis.sp.:209

G3JNX7              	100.00%		P74702              	100.00%
Bootstrap support for G3JNX7 as seed ortholog is 100%.
Bootstrap support for P74702 as seed ortholog is 100%.

Group of orthologs #145. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:77 Synechocystis.sp.:208

G3J989              	100.00%		Q6ZEN7              	100.00%
Bootstrap support for G3J989 as seed ortholog is 90%.
Bootstrap support for Q6ZEN7 as seed ortholog is 100%.

Group of orthologs #146. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 Synechocystis.sp.:207

G3J751              	100.00%		Q55486              	100.00%
Bootstrap support for G3J751 as seed ortholog is 100%.
Bootstrap support for Q55486 as seed ortholog is 100%.

Group of orthologs #147. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:20 Synechocystis.sp.:205

G3JSQ3              	100.00%		P74721              	100.00%
G3JBI3              	7.81%		
G3JQV4              	5.39%		
Bootstrap support for G3JSQ3 as seed ortholog is 69%.
Alternative seed ortholog is G3JP01 (20 bits away from this cluster)
Bootstrap support for P74721 as seed ortholog is 100%.

Group of orthologs #148. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 Synechocystis.sp.:205

G3JPA8              	100.00%		P74311              	100.00%
Bootstrap support for G3JPA8 as seed ortholog is 100%.
Bootstrap support for P74311 as seed ortholog is 100%.

Group of orthologs #149. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:97 Synechocystis.sp.:200

G3J2T9              	100.00%		P74490              	100.00%
Bootstrap support for G3J2T9 as seed ortholog is 99%.
Bootstrap support for P74490 as seed ortholog is 100%.

Group of orthologs #150. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 Synechocystis.sp.:198

G3JN72              	100.00%		P54224              	100.00%
Bootstrap support for G3JN72 as seed ortholog is 100%.
Bootstrap support for P54224 as seed ortholog is 100%.

Group of orthologs #151. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 Synechocystis.sp.:198

G3JPS2              	100.00%		P52981              	100.00%
Bootstrap support for G3JPS2 as seed ortholog is 100%.
Bootstrap support for P52981 as seed ortholog is 100%.

Group of orthologs #152. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 Synechocystis.sp.:98

G3JUG3              	100.00%		Q79EF1              	100.00%
G3JL72              	20.55%		
Bootstrap support for G3JUG3 as seed ortholog is 100%.
Bootstrap support for Q79EF1 as seed ortholog is 98%.

Group of orthologs #153. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 Synechocystis.sp.:192

G3JS74              	100.00%		P74172              	100.00%
Bootstrap support for G3JS74 as seed ortholog is 100%.
Bootstrap support for P74172 as seed ortholog is 100%.

Group of orthologs #154. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 Synechocystis.sp.:191

G3J2Z5              	100.00%		Q55774              	100.00%
G3J7S6              	23.03%		
Bootstrap support for G3J2Z5 as seed ortholog is 100%.
Bootstrap support for Q55774 as seed ortholog is 100%.

Group of orthologs #155. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:149 Synechocystis.sp.:191

G3J6J9              	100.00%		P72834              	100.00%
Bootstrap support for G3J6J9 as seed ortholog is 99%.
Bootstrap support for P72834 as seed ortholog is 100%.

Group of orthologs #156. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 Synechocystis.sp.:191

G3JDL5              	100.00%		P52997              	100.00%
Bootstrap support for G3JDL5 as seed ortholog is 100%.
Bootstrap support for P52997 as seed ortholog is 100%.

Group of orthologs #157. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:26 Synechocystis.sp.:100

G3JFQ8              	100.00%		Q6ZEQ1              	100.00%
Bootstrap support for G3JFQ8 as seed ortholog is 81%.
Bootstrap support for Q6ZEQ1 as seed ortholog is 99%.

Group of orthologs #158. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 Synechocystis.sp.:189

G3J894              	100.00%		P54225              	100.00%
Bootstrap support for G3J894 as seed ortholog is 100%.
Bootstrap support for P54225 as seed ortholog is 100%.

Group of orthologs #159. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 Synechocystis.sp.:73

G3JG67              	100.00%		P74467              	100.00%
                    	       		Q59993              	19.43%
                    	       		P54416              	18.48%
Bootstrap support for G3JG67 as seed ortholog is 100%.
Bootstrap support for P74467 as seed ortholog is 99%.

Group of orthologs #160. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 Synechocystis.sp.:186

G3JU99              	100.00%		Q55778              	100.00%
Bootstrap support for G3JU99 as seed ortholog is 100%.
Bootstrap support for Q55778 as seed ortholog is 100%.

Group of orthologs #161. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:71 Synechocystis.sp.:185

G3JDX3              	100.00%		P80046              	100.00%
G3J655              	17.33%		
Bootstrap support for G3JDX3 as seed ortholog is 91%.
Bootstrap support for P80046 as seed ortholog is 100%.

Group of orthologs #162. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:90 Synechocystis.sp.:184

G3J3F9              	100.00%		P73317              	100.00%
Bootstrap support for G3J3F9 as seed ortholog is 99%.
Bootstrap support for P73317 as seed ortholog is 100%.

Group of orthologs #163. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:103 Synechocystis.sp.:184

G3JDF3              	100.00%		P72655              	100.00%
Bootstrap support for G3JDF3 as seed ortholog is 99%.
Bootstrap support for P72655 as seed ortholog is 100%.

Group of orthologs #164. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 Synechocystis.sp.:181

G3JT32              	100.00%		P54147              	100.00%
G3JJK6              	32.77%		P72935              	18.61%
                    	       		P54148              	11.04%
Bootstrap support for G3JT32 as seed ortholog is 100%.
Bootstrap support for P54147 as seed ortholog is 100%.

Group of orthologs #165. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 Synechocystis.sp.:181

G3JRW9              	100.00%		P73538              	100.00%
Bootstrap support for G3JRW9 as seed ortholog is 100%.
Bootstrap support for P73538 as seed ortholog is 100%.

Group of orthologs #166. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 Synechocystis.sp.:179

G3JL34              	100.00%		P54261              	100.00%
Bootstrap support for G3JL34 as seed ortholog is 100%.
Bootstrap support for P54261 as seed ortholog is 100%.

Group of orthologs #167. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:103 Synechocystis.sp.:177

G3J6J2              	100.00%		P54984              	100.00%
G3JT88              	21.15%		P74654              	14.63%
Bootstrap support for G3J6J2 as seed ortholog is 99%.
Bootstrap support for P54984 as seed ortholog is 100%.

Group of orthologs #168. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 Synechocystis.sp.:124

G3JR03              	100.00%		P53383              	100.00%
G3JF99              	13.10%		
Bootstrap support for G3JR03 as seed ortholog is 100%.
Bootstrap support for P53383 as seed ortholog is 99%.

Group of orthologs #169. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 Synechocystis.sp.:175

G3JS22              	100.00%		P74340              	100.00%
G3JGB8              	7.17%		
Bootstrap support for G3JS22 as seed ortholog is 100%.
Bootstrap support for P74340 as seed ortholog is 100%.

Group of orthologs #170. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 Synechocystis.sp.:173

G3JRM0              	100.00%		P74438              	100.00%
Bootstrap support for G3JRM0 as seed ortholog is 100%.
Bootstrap support for P74438 as seed ortholog is 100%.

Group of orthologs #171. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 Synechocystis.sp.:121

G3JSA1              	100.00%		Q55497              	100.00%
Bootstrap support for G3JSA1 as seed ortholog is 100%.
Bootstrap support for Q55497 as seed ortholog is 99%.

Group of orthologs #172. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 Synechocystis.sp.:172

G3JUF7              	100.00%		P74707              	100.00%
Bootstrap support for G3JUF7 as seed ortholog is 100%.
Bootstrap support for P74707 as seed ortholog is 100%.

Group of orthologs #173. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 Synechocystis.sp.:171

G3JF33              	100.00%		Q55168              	100.00%
Bootstrap support for G3JF33 as seed ortholog is 100%.
Bootstrap support for Q55168 as seed ortholog is 100%.

Group of orthologs #174. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 Synechocystis.sp.:171

G3JKS3              	100.00%		Q55074              	100.00%
Bootstrap support for G3JKS3 as seed ortholog is 100%.
Bootstrap support for Q55074 as seed ortholog is 100%.

Group of orthologs #175. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:34 Synechocystis.sp.:170

G3JHK8              	100.00%		P73004              	100.00%
Bootstrap support for G3JHK8 as seed ortholog is 79%.
Bootstrap support for P73004 as seed ortholog is 100%.

Group of orthologs #176. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 Synechocystis.sp.:170

G3JUC8              	100.00%		P74061              	100.00%
Bootstrap support for G3JUC8 as seed ortholog is 100%.
Bootstrap support for P74061 as seed ortholog is 100%.

Group of orthologs #177. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:18 Synechocystis.sp.:169

G3J8E9              	100.00%		Q6ZE69              	100.00%
Bootstrap support for G3J8E9 as seed ortholog is 63%.
Alternative seed ortholog is G3JUN1 (18 bits away from this cluster)
Bootstrap support for Q6ZE69 as seed ortholog is 100%.

Group of orthologs #178. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 Synechocystis.sp.:169

G3JEG4              	100.00%		P74236              	100.00%
Bootstrap support for G3JEG4 as seed ortholog is 100%.
Bootstrap support for P74236 as seed ortholog is 100%.

Group of orthologs #179. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:1 Synechocystis.sp.:168

G3J549              	100.00%		Q55861              	100.00%
Bootstrap support for G3J549 as seed ortholog is 57%.
Alternative seed ortholog is G3JND6 (1 bits away from this cluster)
Bootstrap support for Q55861 as seed ortholog is 100%.

Group of orthologs #180. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:88 Synechocystis.sp.:168

G3J7I0              	100.00%		Q55629              	100.00%
Bootstrap support for G3J7I0 as seed ortholog is 97%.
Bootstrap support for Q55629 as seed ortholog is 100%.

Group of orthologs #181. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 Synechocystis.sp.:166

G3J2Z4              	100.00%		P72648              	100.00%
G3J8V3              	22.94%		
Bootstrap support for G3J2Z4 as seed ortholog is 100%.
Bootstrap support for P72648 as seed ortholog is 100%.

Group of orthologs #182. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 Synechocystis.sp.:165

G3JD34              	100.00%		P74477              	100.00%
G3J2R3              	21.78%		
G3JMJ5              	15.18%		
Bootstrap support for G3JD34 as seed ortholog is 100%.
Bootstrap support for P74477 as seed ortholog is 100%.

Group of orthologs #183. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:3 Synechocystis.sp.:61

G3J668              	100.00%		P72770              	100.00%
Bootstrap support for G3J668 as seed ortholog is 46%.
Alternative seed ortholog is G3J7L8 (3 bits away from this cluster)
Bootstrap support for P72770 as seed ortholog is 90%.

Group of orthologs #184. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 Synechocystis.sp.:163

G3JBZ5              	100.00%		P29107              	100.00%
Bootstrap support for G3JBZ5 as seed ortholog is 100%.
Bootstrap support for P29107 as seed ortholog is 100%.

Group of orthologs #185. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 Synechocystis.sp.:162

G3J9K6              	100.00%		P73855              	100.00%
Bootstrap support for G3J9K6 as seed ortholog is 100%.
Bootstrap support for P73855 as seed ortholog is 100%.

Group of orthologs #186. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:66 Synechocystis.sp.:162

G3JQ81              	100.00%		P72903              	100.00%
Bootstrap support for G3JQ81 as seed ortholog is 95%.
Bootstrap support for P72903 as seed ortholog is 100%.

Group of orthologs #187. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 Synechocystis.sp.:91

G3JL73              	100.00%		P74724              	100.00%
Bootstrap support for G3JL73 as seed ortholog is 100%.
Bootstrap support for P74724 as seed ortholog is 98%.

Group of orthologs #188. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:9 Synechocystis.sp.:162

G3JU98              	100.00%		P74770              	100.00%
Bootstrap support for G3JU98 as seed ortholog is 59%.
Alternative seed ortholog is G3J5D6 (9 bits away from this cluster)
Bootstrap support for P74770 as seed ortholog is 100%.

Group of orthologs #189. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 Synechocystis.sp.:161

G3JCQ2              	100.00%		P73349              	100.00%
Bootstrap support for G3JCQ2 as seed ortholog is 100%.
Bootstrap support for P73349 as seed ortholog is 100%.

Group of orthologs #190. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 Synechocystis.sp.:160

G3J354              	100.00%		P19050              	100.00%
                    	       		P17062              	39.17%
Bootstrap support for G3J354 as seed ortholog is 100%.
Bootstrap support for P19050 as seed ortholog is 100%.

Group of orthologs #191. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:5 Synechocystis.sp.:160

G3JD95              	100.00%		P73201              	100.00%
Bootstrap support for G3JD95 as seed ortholog is 57%.
Alternative seed ortholog is G3J7F1 (5 bits away from this cluster)
Bootstrap support for P73201 as seed ortholog is 100%.

Group of orthologs #192. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 Synechocystis.sp.:157

G3J529              	100.00%		P74527              	100.00%
G3J5W1              	36.22%		
G3J6K8              	20.95%		
Bootstrap support for G3J529 as seed ortholog is 100%.
Bootstrap support for P74527 as seed ortholog is 100%.

Group of orthologs #193. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 Synechocystis.sp.:38

G3J8T2              	100.00%		P74250              	100.00%
Bootstrap support for G3J8T2 as seed ortholog is 100%.
Bootstrap support for P74250 as seed ortholog is 93%.

Group of orthologs #194. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 Synechocystis.sp.:157

G3JNV1              	100.00%		P73839              	100.00%
Bootstrap support for G3JNV1 as seed ortholog is 100%.
Bootstrap support for P73839 as seed ortholog is 100%.

Group of orthologs #195. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 Synechocystis.sp.:157

G3JPS1              	100.00%		Q55510              	100.00%
Bootstrap support for G3JPS1 as seed ortholog is 100%.
Bootstrap support for Q55510 as seed ortholog is 100%.

Group of orthologs #196. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 Synechocystis.sp.:156

G3J9A7              	100.00%		P73334              	100.00%
G3JJZ0              	19.93%		
G3JDM8              	12.41%		
Bootstrap support for G3J9A7 as seed ortholog is 100%.
Bootstrap support for P73334 as seed ortholog is 100%.

Group of orthologs #197. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 Synechocystis.sp.:156

G3J4R1              	100.00%		P54386              	100.00%
Bootstrap support for G3J4R1 as seed ortholog is 100%.
Bootstrap support for P54386 as seed ortholog is 100%.

Group of orthologs #198. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:108 Synechocystis.sp.:154

G3JRS4              	100.00%		P77968              	100.00%
G3JFY6              	13.92%		
Bootstrap support for G3JRS4 as seed ortholog is 99%.
Bootstrap support for P77968 as seed ortholog is 100%.

Group of orthologs #199. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 Synechocystis.sp.:153

G3JN41              	100.00%		P72940              	100.00%
Bootstrap support for G3JN41 as seed ortholog is 100%.
Bootstrap support for P72940 as seed ortholog is 100%.

Group of orthologs #200. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 Synechocystis.sp.:151

G3JBC0              	100.00%		Q55953              	100.00%
Bootstrap support for G3JBC0 as seed ortholog is 100%.
Bootstrap support for Q55953 as seed ortholog is 100%.

Group of orthologs #201. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:39 Synechocystis.sp.:149

G3JIA0              	100.00%		P48576              	100.00%
Bootstrap support for G3JIA0 as seed ortholog is 85%.
Bootstrap support for P48576 as seed ortholog is 100%.

Group of orthologs #202. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 Synechocystis.sp.:149

G3JFW2              	100.00%		P73436              	100.00%
Bootstrap support for G3JFW2 as seed ortholog is 100%.
Bootstrap support for P73436 as seed ortholog is 100%.

Group of orthologs #203. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:107 Synechocystis.sp.:149

G3JGN6              	100.00%		P74106              	100.00%
Bootstrap support for G3JGN6 as seed ortholog is 99%.
Bootstrap support for P74106 as seed ortholog is 100%.

Group of orthologs #204. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 Synechocystis.sp.:149

G3JQ46              	100.00%		P74782              	100.00%
Bootstrap support for G3JQ46 as seed ortholog is 100%.
Bootstrap support for P74782 as seed ortholog is 100%.

Group of orthologs #205. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:148

G3J8Q8              	100.00%		P72835              	100.00%
Bootstrap support for G3J8Q8 as seed ortholog is 98%.
Bootstrap support for P72835 as seed ortholog is 100%.

Group of orthologs #206. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:5 Synechocystis.sp.:148

G3J7K4              	100.00%		Q55956              	100.00%
Bootstrap support for G3J7K4 as seed ortholog is 79%.
Bootstrap support for Q55956 as seed ortholog is 100%.

Group of orthologs #207. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 Synechocystis.sp.:148

G3JE38              	100.00%		P74211              	100.00%
Bootstrap support for G3JE38 as seed ortholog is 100%.
Bootstrap support for P74211 as seed ortholog is 100%.

Group of orthologs #208. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:27 Synechocystis.sp.:148

G3JEU0              	100.00%		Q55187              	100.00%
Bootstrap support for G3JEU0 as seed ortholog is 71%.
Alternative seed ortholog is G3JJ96 (27 bits away from this cluster)
Bootstrap support for Q55187 as seed ortholog is 100%.

Group of orthologs #209. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:71 Synechocystis.sp.:147

G3JH08              	100.00%		P74181              	100.00%
G3J9X9              	38.15%		
G3JCD1              	37.13%		
Bootstrap support for G3JH08 as seed ortholog is 91%.
Bootstrap support for P74181 as seed ortholog is 100%.

Group of orthologs #210. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 Synechocystis.sp.:147

G3JBE4              	100.00%		P72926              	100.00%
Bootstrap support for G3JBE4 as seed ortholog is 100%.
Bootstrap support for P72926 as seed ortholog is 100%.

Group of orthologs #211. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 Synechocystis.sp.:147

G3JIG1              	100.00%		P74301              	100.00%
Bootstrap support for G3JIG1 as seed ortholog is 100%.
Bootstrap support for P74301 as seed ortholog is 100%.

Group of orthologs #212. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 Synechocystis.sp.:145

G3JTT3              	100.00%		P73646              	100.00%
Bootstrap support for G3JTT3 as seed ortholog is 100%.
Bootstrap support for P73646 as seed ortholog is 100%.

Group of orthologs #213. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 Synechocystis.sp.:144

G3JH75              	100.00%		P74384              	100.00%
Bootstrap support for G3JH75 as seed ortholog is 100%.
Bootstrap support for P74384 as seed ortholog is 100%.

Group of orthologs #214. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:27 Synechocystis.sp.:144

G3JP86              	100.00%		P74756              	100.00%
Bootstrap support for G3JP86 as seed ortholog is 68%.
Alternative seed ortholog is G3JQK0 (27 bits away from this cluster)
Bootstrap support for P74756 as seed ortholog is 100%.

Group of orthologs #215. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:13 Synechocystis.sp.:143

G3JLE0              	100.00%		P73637              	100.00%
G3J6D5              	13.38%		
G3JBV2              	8.33%		
Bootstrap support for G3JLE0 as seed ortholog is 67%.
Alternative seed ortholog is G3J8G0 (13 bits away from this cluster)
Bootstrap support for P73637 as seed ortholog is 100%.

Group of orthologs #216. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 Synechocystis.sp.:143

G3J8W6              	100.00%		P48054              	100.00%
Bootstrap support for G3J8W6 as seed ortholog is 100%.
Bootstrap support for P48054 as seed ortholog is 100%.

Group of orthologs #217. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 Synechocystis.sp.:143

G3JBB9              	100.00%		P74344              	100.00%
Bootstrap support for G3JBB9 as seed ortholog is 100%.
Bootstrap support for P74344 as seed ortholog is 100%.

Group of orthologs #218. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:57 Synechocystis.sp.:139

G3JAX9              	100.00%		Q55493              	100.00%
G3JRX9              	11.98%		P73939              	10.89%
Bootstrap support for G3JAX9 as seed ortholog is 91%.
Bootstrap support for Q55493 as seed ortholog is 100%.

Group of orthologs #219. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:34 Synechocystis.sp.:83

G3J4T2              	100.00%		P55175              	100.00%
Bootstrap support for G3J4T2 as seed ortholog is 81%.
Bootstrap support for P55175 as seed ortholog is 99%.

Group of orthologs #220. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 Synechocystis.sp.:139

G3J761              	100.00%		P73935              	100.00%
Bootstrap support for G3J761 as seed ortholog is 100%.
Bootstrap support for P73935 as seed ortholog is 100%.

Group of orthologs #221. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:27 Synechocystis.sp.:139

G3J6I7              	100.00%		Q59994              	100.00%
Bootstrap support for G3J6I7 as seed ortholog is 78%.
Bootstrap support for Q59994 as seed ortholog is 100%.

Group of orthologs #222. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 Synechocystis.sp.:138

G3J9Y5              	100.00%		P73374              	100.00%
Bootstrap support for G3J9Y5 as seed ortholog is 100%.
Bootstrap support for P73374 as seed ortholog is 100%.

Group of orthologs #223. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 Synechocystis.sp.:137

G3JQN0              	100.00%		P74696              	100.00%
Bootstrap support for G3JQN0 as seed ortholog is 100%.
Bootstrap support for P74696 as seed ortholog is 100%.

Group of orthologs #224. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:25 Synechocystis.sp.:136

G3JDI3              	100.00%		Q6ZE58              	100.00%
G3JUH2              	100.00%		
G3JUT4              	64.46%		
Bootstrap support for G3JDI3 as seed ortholog is 71%.
Alternative seed ortholog is G3JG90 (25 bits away from this cluster)
Bootstrap support for G3JUH2 as seed ortholog is 73%.
Alternative seed ortholog is G3JG90 (25 bits away from this cluster)
Bootstrap support for Q6ZE58 as seed ortholog is 100%.

Group of orthologs #225. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:89 Synechocystis.sp.:136

G3J6B7              	100.00%		P74230              	100.00%
Bootstrap support for G3J6B7 as seed ortholog is 99%.
Bootstrap support for P74230 as seed ortholog is 100%.

Group of orthologs #226. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:12 Synechocystis.sp.:136

G3JM99              	100.00%		P73990              	100.00%
Bootstrap support for G3JM99 as seed ortholog is 36%.
Alternative seed ortholog is G3JD90 (12 bits away from this cluster)
Bootstrap support for P73990 as seed ortholog is 100%.

Group of orthologs #227. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 Synechocystis.sp.:134

G3JF26              	100.00%		P73627              	100.00%
                    	       		Q55884              	24.31%
                    	       		P73121              	16.75%
                    	       		Q55680              	13.78%
Bootstrap support for G3JF26 as seed ortholog is 100%.
Bootstrap support for P73627 as seed ortholog is 100%.

Group of orthologs #228. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 Synechocystis.sp.:134

G3J5K8              	100.00%		P74572              	100.00%
Bootstrap support for G3J5K8 as seed ortholog is 100%.
Bootstrap support for P74572 as seed ortholog is 100%.

Group of orthologs #229. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 Synechocystis.sp.:134

G3JI92              	100.00%		P73367              	100.00%
Bootstrap support for G3JI92 as seed ortholog is 100%.
Bootstrap support for P73367 as seed ortholog is 100%.

Group of orthologs #230. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:4 Synechocystis.sp.:132

G3JDR4              	100.00%		P73842              	100.00%
G3JDR3              	15.89%		
G3JMU7              	6.02%		
Bootstrap support for G3JDR4 as seed ortholog is 56%.
Alternative seed ortholog is G3JUW0 (4 bits away from this cluster)
Bootstrap support for P73842 as seed ortholog is 100%.

Group of orthologs #231. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 Synechocystis.sp.:132

G3JEK6              	100.00%		Q55482              	100.00%
G3J5B5              	7.03%		
Bootstrap support for G3JEK6 as seed ortholog is 100%.
Bootstrap support for Q55482 as seed ortholog is 100%.

Group of orthologs #232. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 Synechocystis.sp.:1

G3J7P5              	100.00%		P72622              	100.00%
Bootstrap support for G3J7P5 as seed ortholog is 100%.
Bootstrap support for P72622 as seed ortholog is 49%.
Alternative seed ortholog is P72800 (1 bits away from this cluster)

Group of orthologs #233. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 Synechocystis.sp.:131

G3JCV9              	100.00%		P73617              	100.00%
Bootstrap support for G3JCV9 as seed ortholog is 100%.
Bootstrap support for P73617 as seed ortholog is 100%.

Group of orthologs #234. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 Synechocystis.sp.:130

G3JFZ2              	100.00%		P73220              	100.00%
G3J9T7              	27.90%		
G3JPZ8              	23.90%		
G3J9Q8              	23.46%		
G3JU47              	23.28%		
G3JMT7              	22.87%		
G3JAQ8              	22.84%		
G3JGH2              	22.76%		
G3JPC9              	22.73%		
G3JJW5              	22.51%		
G3JLC2              	22.18%		
G3JTA4              	21.11%		
G3JTX5              	20.05%		
G3JM54              	19.65%		
G3JQH9              	19.43%		
G3JIY3              	19.39%		
G3JIZ5              	19.21%		
G3JN53              	17.41%		
G3J2K0              	17.01%		
G3JEV7              	16.64%		
G3J318              	15.95%		
G3JBM8              	11.91%		
G3JRB5              	11.33%		
G3JIW0              	10.81%		
G3JQT5              	10.78%		
G3JGH1              	10.30%		
G3JQN4              	10.19%		
G3JKG7              	9.97%		
G3J9K0              	9.02%		
G3JE04              	7.99%		
G3J2Y1              	7.81%		
G3JDQ2              	6.93%		
G3JPJ6              	6.60%		
G3JRU1              	6.20%		
G3JM34              	5.90%		
G3JP66              	5.76%		
G3J967              	5.50%		
G3JNI3              	5.17%		
Bootstrap support for G3JFZ2 as seed ortholog is 100%.
Bootstrap support for P73220 as seed ortholog is 100%.

Group of orthologs #235. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 Synechocystis.sp.:130

G3JQ44              	100.00%		P73863              	100.00%
                    	       		P74393              	6.67%
Bootstrap support for G3JQ44 as seed ortholog is 100%.
Bootstrap support for P73863 as seed ortholog is 100%.

Group of orthologs #236. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 Synechocystis.sp.:130

G3JJT7              	100.00%		P54899              	100.00%
Bootstrap support for G3JJT7 as seed ortholog is 100%.
Bootstrap support for P54899 as seed ortholog is 100%.

Group of orthologs #237. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 Synechocystis.sp.:129

G3JA96              	100.00%		Q55406              	100.00%
Bootstrap support for G3JA96 as seed ortholog is 100%.
Bootstrap support for Q55406 as seed ortholog is 100%.

Group of orthologs #238. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 Synechocystis.sp.:128

G3JLY2              	100.00%		P74494              	100.00%
Bootstrap support for G3JLY2 as seed ortholog is 100%.
Bootstrap support for P74494 as seed ortholog is 100%.

Group of orthologs #239. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 Synechocystis.sp.:128

G3JSK5              	100.00%		P73320              	100.00%
Bootstrap support for G3JSK5 as seed ortholog is 100%.
Bootstrap support for P73320 as seed ortholog is 100%.

Group of orthologs #240. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 Synechocystis.sp.:127

G3JM02              	100.00%		P73723              	100.00%
Bootstrap support for G3JM02 as seed ortholog is 100%.
Bootstrap support for P73723 as seed ortholog is 100%.

Group of orthologs #241. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 Synechocystis.sp.:126

G3J7Q8              	100.00%		P73270              	100.00%
Bootstrap support for G3J7Q8 as seed ortholog is 100%.
Bootstrap support for P73270 as seed ortholog is 100%.

Group of orthologs #242. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 Synechocystis.sp.:126

G3JHU6              	100.00%		P72779              	100.00%
Bootstrap support for G3JHU6 as seed ortholog is 100%.
Bootstrap support for P72779 as seed ortholog is 100%.

Group of orthologs #243. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 Synechocystis.sp.:126

G3JUC9              	100.00%		P73914              	100.00%
Bootstrap support for G3JUC9 as seed ortholog is 100%.
Bootstrap support for P73914 as seed ortholog is 100%.

Group of orthologs #244. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 Synechocystis.sp.:126

G3JSA0              	100.00%		Q55141              	100.00%
Bootstrap support for G3JSA0 as seed ortholog is 100%.
Bootstrap support for Q55141 as seed ortholog is 100%.

Group of orthologs #245. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 Synechocystis.sp.:125

G3JFF0              	100.00%		P52965              	100.00%
Bootstrap support for G3JFF0 as seed ortholog is 100%.
Bootstrap support for P52965 as seed ortholog is 100%.

Group of orthologs #246. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 Synechocystis.sp.:124

G3J2L0              	100.00%		P74281              	100.00%
Bootstrap support for G3J2L0 as seed ortholog is 100%.
Bootstrap support for P74281 as seed ortholog is 100%.

Group of orthologs #247. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 Synechocystis.sp.:124

G3J988              	100.00%		P17253              	100.00%
Bootstrap support for G3J988 as seed ortholog is 100%.
Bootstrap support for P17253 as seed ortholog is 100%.

Group of orthologs #248. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 Synechocystis.sp.:124

G3JU02              	100.00%		P52983              	100.00%
Bootstrap support for G3JU02 as seed ortholog is 100%.
Bootstrap support for P52983 as seed ortholog is 100%.

Group of orthologs #249. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 Synechocystis.sp.:123

G3JD93              	100.00%		P72943              	100.00%
Bootstrap support for G3JD93 as seed ortholog is 100%.
Bootstrap support for P72943 as seed ortholog is 100%.

Group of orthologs #250. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:31 Synechocystis.sp.:123

G3JPG2              	100.00%		Q55383              	100.00%
Bootstrap support for G3JPG2 as seed ortholog is 78%.
Bootstrap support for Q55383 as seed ortholog is 100%.

Group of orthologs #251. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 Synechocystis.sp.:122

G3JN12              	100.00%		P73997              	100.00%
Bootstrap support for G3JN12 as seed ortholog is 100%.
Bootstrap support for P73997 as seed ortholog is 100%.

Group of orthologs #252. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:22 Synechocystis.sp.:121

G3JPX6              	100.00%		P73302              	100.00%
G3JFZ0              	5.56%		P72641              	6.40%
Bootstrap support for G3JPX6 as seed ortholog is 77%.
Bootstrap support for P73302 as seed ortholog is 100%.

Group of orthologs #253. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 Synechocystis.sp.:121

G3JTP8              	100.00%		P73015              	100.00%
G3JMV2              	19.29%		
G3JSL1              	13.68%		
Bootstrap support for G3JTP8 as seed ortholog is 100%.
Bootstrap support for P73015 as seed ortholog is 100%.

Group of orthologs #254. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 Synechocystis.sp.:121

G3JL92              	100.00%		Q55532              	100.00%
Bootstrap support for G3JL92 as seed ortholog is 100%.
Bootstrap support for Q55532 as seed ortholog is 100%.

Group of orthologs #255. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 Synechocystis.sp.:70

G3JUE5              	100.00%		Q55793              	100.00%
G3JCC1              	15.83%		
Bootstrap support for G3JUE5 as seed ortholog is 100%.
Bootstrap support for Q55793 as seed ortholog is 96%.

Group of orthologs #256. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 Synechocystis.sp.:119

G3JRZ1              	100.00%		P74567              	100.00%
Bootstrap support for G3JRZ1 as seed ortholog is 100%.
Bootstrap support for P74567 as seed ortholog is 100%.

Group of orthologs #257. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 Synechocystis.sp.:119

G3JNB9              	100.00%		Q79EF2              	100.00%
Bootstrap support for G3JNB9 as seed ortholog is 100%.
Bootstrap support for Q79EF2 as seed ortholog is 100%.

Group of orthologs #258. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 Synechocystis.sp.:118

G3JH43              	100.00%		P74286              	100.00%
G3JLZ6              	28.39%		
Bootstrap support for G3JH43 as seed ortholog is 100%.
Bootstrap support for P74286 as seed ortholog is 100%.

Group of orthologs #259. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 Synechocystis.sp.:118

G3J6K0              	100.00%		Q55598              	100.00%
Bootstrap support for G3J6K0 as seed ortholog is 100%.
Bootstrap support for Q55598 as seed ortholog is 100%.

Group of orthologs #260. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 Synechocystis.sp.:116

G3JRM3              	100.00%		Q55367              	100.00%
Bootstrap support for G3JRM3 as seed ortholog is 100%.
Bootstrap support for Q55367 as seed ortholog is 100%.

Group of orthologs #261. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 Synechocystis.sp.:115

G3JEB0              	100.00%		Q55477              	100.00%
G3JHW1              	44.25%		
G3J2Z8              	29.50%		
G3JEG8              	27.48%		
G3J3F3              	20.65%		
G3JQD3              	17.24%		
G3JJM4              	13.66%		
G3J969              	9.32%		
G3JJD0              	5.28%		
Bootstrap support for G3JEB0 as seed ortholog is 100%.
Bootstrap support for Q55477 as seed ortholog is 100%.

Group of orthologs #262. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 Synechocystis.sp.:115

G3JUU1              	100.00%		P73056              	100.00%
Bootstrap support for G3JUU1 as seed ortholog is 100%.
Bootstrap support for P73056 as seed ortholog is 100%.

Group of orthologs #263. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 Synechocystis.sp.:114

G3JPX1              	100.00%		Q55500              	100.00%
G3JTD6              	6.51%		
Bootstrap support for G3JPX1 as seed ortholog is 100%.
Bootstrap support for Q55500 as seed ortholog is 100%.

Group of orthologs #264. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 Synechocystis.sp.:114

G3JS16              	100.00%		P72763              	100.00%
Bootstrap support for G3JS16 as seed ortholog is 100%.
Bootstrap support for P72763 as seed ortholog is 100%.

Group of orthologs #265. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 Synechocystis.sp.:113

G3JCZ7              	100.00%		P74569              	100.00%
G3JTQ9              	10.47%		
Bootstrap support for G3JCZ7 as seed ortholog is 100%.
Bootstrap support for P74569 as seed ortholog is 100%.

Group of orthologs #266. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 Synechocystis.sp.:113

G3J7D0              	100.00%		P72794              	100.00%
Bootstrap support for G3J7D0 as seed ortholog is 100%.
Bootstrap support for P72794 as seed ortholog is 100%.

Group of orthologs #267. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:67 Synechocystis.sp.:113

G3J773              	100.00%		P73141              	100.00%
Bootstrap support for G3J773 as seed ortholog is 95%.
Bootstrap support for P73141 as seed ortholog is 100%.

Group of orthologs #268. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 Synechocystis.sp.:113

G3JGY3              	100.00%		P77961              	100.00%
Bootstrap support for G3JGY3 as seed ortholog is 100%.
Bootstrap support for P77961 as seed ortholog is 100%.

Group of orthologs #269. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:21 Synechocystis.sp.:113

G3JST8              	100.00%		Q55128              	100.00%
Bootstrap support for G3JST8 as seed ortholog is 69%.
Alternative seed ortholog is G3JFG0 (21 bits away from this cluster)
Bootstrap support for Q55128 as seed ortholog is 100%.

Group of orthologs #270. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:70 Synechocystis.sp.:112

G3J656              	100.00%		P74745              	100.00%
G3JUM0              	100.00%		
G3JGG6              	17.98%		
G3JIZ3              	5.15%		
Bootstrap support for G3J656 as seed ortholog is 88%.
Bootstrap support for G3JUM0 as seed ortholog is 95%.
Bootstrap support for P74745 as seed ortholog is 100%.

Group of orthologs #271. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 Synechocystis.sp.:112

G3J486              	100.00%		Q55766              	100.00%
Bootstrap support for G3J486 as seed ortholog is 100%.
Bootstrap support for Q55766 as seed ortholog is 100%.

Group of orthologs #272. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 Synechocystis.sp.:112

G3JFI1              	100.00%		P73955              	100.00%
Bootstrap support for G3JFI1 as seed ortholog is 100%.
Bootstrap support for P73955 as seed ortholog is 100%.

Group of orthologs #273. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 Synechocystis.sp.:111

G3JSY5              	100.00%		P72927              	100.00%
G3JH35              	17.00%		
Bootstrap support for G3JSY5 as seed ortholog is 100%.
Bootstrap support for P72927 as seed ortholog is 100%.

Group of orthologs #274. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 Synechocystis.sp.:111

G3JNP9              	100.00%		Q55794              	100.00%
                    	       		P72799              	5.15%
Bootstrap support for G3JNP9 as seed ortholog is 100%.
Bootstrap support for Q55794 as seed ortholog is 100%.

Group of orthologs #275. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 Synechocystis.sp.:111

G3J7X2              	100.00%		P73810              	100.00%
Bootstrap support for G3J7X2 as seed ortholog is 100%.
Bootstrap support for P73810 as seed ortholog is 100%.

Group of orthologs #276. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 Synechocystis.sp.:111

G3JJM0              	100.00%		P73853              	100.00%
Bootstrap support for G3JJM0 as seed ortholog is 100%.
Bootstrap support for P73853 as seed ortholog is 100%.

Group of orthologs #277. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 Synechocystis.sp.:110

G3JQM9              	100.00%		P72661              	100.00%
G3JTB1              	16.04%		
Bootstrap support for G3JQM9 as seed ortholog is 100%.
Bootstrap support for P72661 as seed ortholog is 100%.

Group of orthologs #278. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 Synechocystis.sp.:110

G3JA42              	100.00%		P73930              	100.00%
Bootstrap support for G3JA42 as seed ortholog is 100%.
Bootstrap support for P73930 as seed ortholog is 100%.

Group of orthologs #279. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 Synechocystis.sp.:52

G3JCU4              	100.00%		P74158              	100.00%
Bootstrap support for G3JCU4 as seed ortholog is 100%.
Bootstrap support for P74158 as seed ortholog is 97%.

Group of orthologs #280. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:8 Synechocystis.sp.:39

G3JNZ7              	100.00%		P73826              	100.00%
G3JSW4              	26.32%		P73574              	14.53%
G3JK66              	20.33%		
G3JSE6              	17.70%		
G3JHV2              	14.83%		
G3JAD1              	6.94%		
Bootstrap support for G3JNZ7 as seed ortholog is 61%.
Alternative seed ortholog is G3JDD4 (8 bits away from this cluster)
Bootstrap support for P73826 as seed ortholog is 89%.

Group of orthologs #281. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 Synechocystis.sp.:109

G3J714              	100.00%		P74153              	100.00%
Bootstrap support for G3J714 as seed ortholog is 100%.
Bootstrap support for P74153 as seed ortholog is 100%.

Group of orthologs #282. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:5 Synechocystis.sp.:48

G3J5U9              	100.00%		P74598              	100.00%
Bootstrap support for G3J5U9 as seed ortholog is 55%.
Alternative seed ortholog is G3JKV6 (5 bits away from this cluster)
Bootstrap support for P74598 as seed ortholog is 90%.

Group of orthologs #283. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 Synechocystis.sp.:109

G3JJ23              	100.00%		P74590              	100.00%
Bootstrap support for G3JJ23 as seed ortholog is 100%.
Bootstrap support for P74590 as seed ortholog is 100%.

Group of orthologs #284. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 Synechocystis.sp.:109

G3JPZ0              	100.00%		P72808              	100.00%
Bootstrap support for G3JPZ0 as seed ortholog is 100%.
Bootstrap support for P72808 as seed ortholog is 100%.

Group of orthologs #285. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:34 Synechocystis.sp.:108

G3JGE1              	100.00%		Q55910              	100.00%
G3J554              	6.30%		
Bootstrap support for G3JGE1 as seed ortholog is 78%.
Bootstrap support for Q55910 as seed ortholog is 100%.

Group of orthologs #286. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:10 Synechocystis.sp.:108

G3JCW8              	100.00%		P74034              	100.00%
Bootstrap support for G3JCW8 as seed ortholog is 59%.
Alternative seed ortholog is G3J9A0 (10 bits away from this cluster)
Bootstrap support for P74034 as seed ortholog is 100%.

Group of orthologs #287. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 Synechocystis.sp.:107

G3JB62              	100.00%		P74550              	100.00%
                    	       		Q6ZEU2              	12.68%
Bootstrap support for G3JB62 as seed ortholog is 100%.
Bootstrap support for P74550 as seed ortholog is 100%.

Group of orthologs #288. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 Synechocystis.sp.:40

G3J5I8              	100.00%		P74336              	100.00%
Bootstrap support for G3J5I8 as seed ortholog is 100%.
Bootstrap support for P74336 as seed ortholog is 90%.

Group of orthologs #289. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 Synechocystis.sp.:106

G3JE42              	100.00%		P73807              	100.00%
Bootstrap support for G3JE42 as seed ortholog is 100%.
Bootstrap support for P73807 as seed ortholog is 100%.

Group of orthologs #290. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 Synechocystis.sp.:106

G3JSV8              	100.00%		P73903              	100.00%
Bootstrap support for G3JSV8 as seed ortholog is 100%.
Bootstrap support for P73903 as seed ortholog is 100%.

Group of orthologs #291. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 Synechocystis.sp.:106

G3JRF2              	100.00%		P74618              	100.00%
Bootstrap support for G3JRF2 as seed ortholog is 100%.
Bootstrap support for P74618 as seed ortholog is 100%.

Group of orthologs #292. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:38 Synechocystis.sp.:105

G3JQK3              	100.00%		Q55513              	100.00%
G3JNZ9              	18.10%		
G3J8V1              	17.55%		
G3JIT2              	15.54%		
Bootstrap support for G3JQK3 as seed ortholog is 89%.
Bootstrap support for Q55513 as seed ortholog is 100%.

Group of orthologs #293. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 Synechocystis.sp.:104

G3JDV2              	100.00%		P73799              	100.00%
G3JDV8              	27.03%		
Bootstrap support for G3JDV2 as seed ortholog is 100%.
Bootstrap support for P73799 as seed ortholog is 100%.

Group of orthologs #294. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 Synechocystis.sp.:104

G3J3E1              	100.00%		P72666              	100.00%
Bootstrap support for G3J3E1 as seed ortholog is 100%.
Bootstrap support for P72666 as seed ortholog is 100%.

Group of orthologs #295. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:18 Synechocystis.sp.:22

G3J406              	100.00%		Q55922              	100.00%
Bootstrap support for G3J406 as seed ortholog is 70%.
Alternative seed ortholog is G3JF97 (18 bits away from this cluster)
Bootstrap support for Q55922 as seed ortholog is 73%.
Alternative seed ortholog is P73591 (22 bits away from this cluster)

Group of orthologs #296. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:51 Synechocystis.sp.:104

G3J6Q0              	100.00%		Q55702              	100.00%
Bootstrap support for G3J6Q0 as seed ortholog is 96%.
Bootstrap support for Q55702 as seed ortholog is 100%.

Group of orthologs #297. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 Synechocystis.sp.:104

G3JBH0              	100.00%		Q55575              	100.00%
Bootstrap support for G3JBH0 as seed ortholog is 100%.
Bootstrap support for Q55575 as seed ortholog is 100%.

Group of orthologs #298. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:27 Synechocystis.sp.:102

G3J5A6              	100.00%		P73495              	100.00%
G3J689              	7.63%		
G3JTY6              	7.42%		
Bootstrap support for G3J5A6 as seed ortholog is 82%.
Bootstrap support for P73495 as seed ortholog is 100%.

Group of orthologs #299. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:6 Synechocystis.sp.:102

G3JD97              	100.00%		P72753              	100.00%
Bootstrap support for G3JD97 as seed ortholog is 56%.
Alternative seed ortholog is G3JA93 (6 bits away from this cluster)
Bootstrap support for P72753 as seed ortholog is 100%.

Group of orthologs #300. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 Synechocystis.sp.:102

G3JKU1              	100.00%		P72970              	100.00%
Bootstrap support for G3JKU1 as seed ortholog is 100%.
Bootstrap support for P72970 as seed ortholog is 100%.

Group of orthologs #301. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 Synechocystis.sp.:101

G3J8E2              	100.00%		P73776              	100.00%
Bootstrap support for G3J8E2 as seed ortholog is 100%.
Bootstrap support for P73776 as seed ortholog is 100%.

Group of orthologs #302. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 Synechocystis.sp.:100

G3JIT3              	100.00%		P52761              	100.00%
Bootstrap support for G3JIT3 as seed ortholog is 100%.
Bootstrap support for P52761 as seed ortholog is 100%.

Group of orthologs #303. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:50 Synechocystis.sp.:99

G3JFY3              	100.00%		P73424              	100.00%
Bootstrap support for G3JFY3 as seed ortholog is 91%.
Bootstrap support for P73424 as seed ortholog is 100%.

Group of orthologs #304. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 Synechocystis.sp.:99

G3JL82              	100.00%		P72754              	100.00%
Bootstrap support for G3JL82 as seed ortholog is 100%.
Bootstrap support for P72754 as seed ortholog is 100%.

Group of orthologs #305. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 Synechocystis.sp.:99

G3JUP7              	100.00%		P74167              	100.00%
Bootstrap support for G3JUP7 as seed ortholog is 100%.
Bootstrap support for P74167 as seed ortholog is 100%.

Group of orthologs #306. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:2 Synechocystis.sp.:98

G3JFL3              	100.00%		Q59990              	100.00%
G3J8J4              	13.38%		
G3J8J0              	12.34%		
G3JI25              	12.24%		
G3J7V6              	7.26%		
G3J8J8              	6.33%		
Bootstrap support for G3JFL3 as seed ortholog is 48%.
Alternative seed ortholog is G3JPH2 (2 bits away from this cluster)
Bootstrap support for Q59990 as seed ortholog is 100%.

Group of orthologs #307. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:26 Synechocystis.sp.:98

G3JHX6              	100.00%		Q55925              	100.00%
G3J5K1              	11.73%		
Bootstrap support for G3JHX6 as seed ortholog is 82%.
Bootstrap support for Q55925 as seed ortholog is 100%.

Group of orthologs #308. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 Synechocystis.sp.:98

G3J8U6              	100.00%		P54004              	100.00%
Bootstrap support for G3J8U6 as seed ortholog is 100%.
Bootstrap support for P54004 as seed ortholog is 100%.

Group of orthologs #309. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 Synechocystis.sp.:98

G3JRH4              	100.00%		P72644              	100.00%
Bootstrap support for G3JRH4 as seed ortholog is 100%.
Bootstrap support for P72644 as seed ortholog is 100%.

Group of orthologs #310. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:4 Synechocystis.sp.:95

G3JUA8              	100.00%		P74614              	100.00%
G3J5D9              	13.69%		
Bootstrap support for G3JUA8 as seed ortholog is 47%.
Alternative seed ortholog is G3J3X1 (4 bits away from this cluster)
Bootstrap support for P74614 as seed ortholog is 100%.

Group of orthologs #311. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 Synechocystis.sp.:95

G3JUA2              	100.00%		P73294              	100.00%
Bootstrap support for G3JUA2 as seed ortholog is 100%.
Bootstrap support for P73294 as seed ortholog is 100%.

Group of orthologs #312. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 Synechocystis.sp.:94

G3JTU2              	100.00%		Q55364              	100.00%
G3JEE0              	48.22%		
Bootstrap support for G3JTU2 as seed ortholog is 100%.
Bootstrap support for Q55364 as seed ortholog is 100%.

Group of orthologs #313. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 Synechocystis.sp.:93

G3JG22              	100.00%		Q55159              	100.00%
G3JJN0              	100.00%		P74305              	100.00%
                    	       		P73670              	18.92%
                    	       		P73669              	8.41%
Bootstrap support for G3JG22 as seed ortholog is 100%.
Bootstrap support for G3JJN0 as seed ortholog is 100%.
Bootstrap support for Q55159 as seed ortholog is 100%.
Bootstrap support for P74305 as seed ortholog is 100%.

Group of orthologs #314. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:26 Synechocystis.sp.:93

G3JUS8              	100.00%		Q55813              	100.00%
G3JT86              	36.86%		
Bootstrap support for G3JUS8 as seed ortholog is 80%.
Bootstrap support for Q55813 as seed ortholog is 100%.

Group of orthologs #315. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 Synechocystis.sp.:92

G3J9R1              	100.00%		P73577              	100.00%
Bootstrap support for G3J9R1 as seed ortholog is 100%.
Bootstrap support for P73577 as seed ortholog is 100%.

Group of orthologs #316. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 Synechocystis.sp.:90

G3J3E8              	100.00%		P52986              	100.00%
Bootstrap support for G3J3E8 as seed ortholog is 100%.
Bootstrap support for P52986 as seed ortholog is 100%.

Group of orthologs #317. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 Synechocystis.sp.:90

G3J900              	100.00%		Q55626              	100.00%
Bootstrap support for G3J900 as seed ortholog is 100%.
Bootstrap support for Q55626 as seed ortholog is 100%.

Group of orthologs #318. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 Synechocystis.sp.:19

G3JHW7              	100.00%		P73369              	100.00%
Bootstrap support for G3JHW7 as seed ortholog is 100%.
Bootstrap support for P73369 as seed ortholog is 57%.
Alternative seed ortholog is P72911 (19 bits away from this cluster)

Group of orthologs #319. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:11 Synechocystis.sp.:89

G3JK70              	100.00%		Q55664              	100.00%
G3JT65              	52.65%		
Bootstrap support for G3JK70 as seed ortholog is 59%.
Alternative seed ortholog is G3J5T1 (11 bits away from this cluster)
Bootstrap support for Q55664 as seed ortholog is 100%.

Group of orthologs #320. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 Synechocystis.sp.:89

G3J810              	100.00%		P72699              	100.00%
Bootstrap support for G3J810 as seed ortholog is 100%.
Bootstrap support for P72699 as seed ortholog is 100%.

Group of orthologs #321. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:12 Synechocystis.sp.:89

G3J9Y8              	100.00%		P74383              	100.00%
Bootstrap support for G3J9Y8 as seed ortholog is 56%.
Alternative seed ortholog is G3JCI6 (12 bits away from this cluster)
Bootstrap support for P74383 as seed ortholog is 100%.

Group of orthologs #322. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:30 Synechocystis.sp.:89

G3JBH6              	100.00%		Q55478              	100.00%
Bootstrap support for G3JBH6 as seed ortholog is 76%.
Bootstrap support for Q55478 as seed ortholog is 100%.

Group of orthologs #323. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 Synechocystis.sp.:89

G3JG13              	100.00%		P74114              	100.00%
Bootstrap support for G3JG13 as seed ortholog is 100%.
Bootstrap support for P74114 as seed ortholog is 100%.

Group of orthologs #324. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 Synechocystis.sp.:89

G3JSZ2              	100.00%		P36237              	100.00%
Bootstrap support for G3JSZ2 as seed ortholog is 100%.
Bootstrap support for P36237 as seed ortholog is 100%.

Group of orthologs #325. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 Synechocystis.sp.:89

G3JU77              	100.00%		P73560              	100.00%
Bootstrap support for G3JU77 as seed ortholog is 100%.
Bootstrap support for P73560 as seed ortholog is 100%.

Group of orthologs #326. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 Synechocystis.sp.:88

G3JCQ6              	100.00%		Q55589              	100.00%
G3J484              	10.76%		Q55174              	32.88%
G3J8D1              	6.91%		
G3JLN8              	5.98%		
Bootstrap support for G3JCQ6 as seed ortholog is 100%.
Bootstrap support for Q55589 as seed ortholog is 100%.

Group of orthologs #327. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 Synechocystis.sp.:87

G3J7W8              	100.00%		Q55695              	100.00%
G3JRI4              	5.82%		
Bootstrap support for G3J7W8 as seed ortholog is 100%.
Bootstrap support for Q55695 as seed ortholog is 100%.

Group of orthologs #328. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 Synechocystis.sp.:87

G3JTZ1              	100.00%		P72845              	100.00%
G3JTY9              	34.77%		
Bootstrap support for G3JTZ1 as seed ortholog is 100%.
Bootstrap support for P72845 as seed ortholog is 100%.

Group of orthologs #329. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 Synechocystis.sp.:87

G3J9T0              	100.00%		P73728              	100.00%
Bootstrap support for G3J9T0 as seed ortholog is 100%.
Bootstrap support for P73728 as seed ortholog is 100%.

Group of orthologs #330. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 Synechocystis.sp.:35

G3JC78              	100.00%		P74041              	100.00%
Bootstrap support for G3JC78 as seed ortholog is 100%.
Bootstrap support for P74041 as seed ortholog is 87%.

Group of orthologs #331. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 Synechocystis.sp.:87

G3JH47              	100.00%		P74732              	100.00%
Bootstrap support for G3JH47 as seed ortholog is 100%.
Bootstrap support for P74732 as seed ortholog is 100%.

Group of orthologs #332. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:7 Synechocystis.sp.:41

G3JU32              	100.00%		Q55596              	100.00%
Bootstrap support for G3JU32 as seed ortholog is 80%.
Bootstrap support for Q55596 as seed ortholog is 91%.

Group of orthologs #333. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 Synechocystis.sp.:86

G3JN64              	100.00%		P72702              	100.00%
G3J7K8              	28.42%		
Bootstrap support for G3JN64 as seed ortholog is 100%.
Bootstrap support for P72702 as seed ortholog is 100%.

Group of orthologs #334. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 Synechocystis.sp.:86

G3JM21              	100.00%		P73949              	100.00%
Bootstrap support for G3JM21 as seed ortholog is 100%.
Bootstrap support for P73949 as seed ortholog is 100%.

Group of orthologs #335. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 Synechocystis.sp.:86

G3JPU4              	100.00%		Q55515              	100.00%
Bootstrap support for G3JPU4 as seed ortholog is 100%.
Bootstrap support for Q55515 as seed ortholog is 100%.

Group of orthologs #336. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:43 Synechocystis.sp.:85

G3J3N3              	100.00%		P72818              	100.00%
Bootstrap support for G3J3N3 as seed ortholog is 89%.
Bootstrap support for P72818 as seed ortholog is 100%.

Group of orthologs #337. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:13 Synechocystis.sp.:85

G3JLM6              	100.00%		P73885              	100.00%
Bootstrap support for G3JLM6 as seed ortholog is 64%.
Alternative seed ortholog is G3JAC6 (13 bits away from this cluster)
Bootstrap support for P73885 as seed ortholog is 100%.

Group of orthologs #338. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 Synechocystis.sp.:84

G3JFC8              	100.00%		P73125              	100.00%
Bootstrap support for G3JFC8 as seed ortholog is 100%.
Bootstrap support for P73125 as seed ortholog is 100%.

Group of orthologs #339. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 Synechocystis.sp.:84

G3JA18              	100.00%		Q55512              	100.00%
Bootstrap support for G3JA18 as seed ortholog is 100%.
Bootstrap support for Q55512 as seed ortholog is 100%.

Group of orthologs #340. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 Synechocystis.sp.:84

G3JTM4              	100.00%		P73242              	100.00%
Bootstrap support for G3JTM4 as seed ortholog is 100%.
Bootstrap support for P73242 as seed ortholog is 100%.

Group of orthologs #341. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 Synechocystis.sp.:83

G3JHT6              	100.00%		P74078              	100.00%
                    	       		P74409              	10.14%
Bootstrap support for G3JHT6 as seed ortholog is 100%.
Bootstrap support for P74078 as seed ortholog is 100%.

Group of orthologs #342. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 Synechocystis.sp.:83

G3JNL9              	100.00%		P73310              	100.00%
Bootstrap support for G3JNL9 as seed ortholog is 100%.
Bootstrap support for P73310 as seed ortholog is 100%.

Group of orthologs #343. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:21 Synechocystis.sp.:26

G3JT87              	100.00%		P73688              	100.00%
Bootstrap support for G3JT87 as seed ortholog is 77%.
Bootstrap support for P73688 as seed ortholog is 80%.

Group of orthologs #344. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3J804              	100.00%		Q55727              	100.00%
                    	       		P74074              	47.98%
Bootstrap support for G3J804 as seed ortholog is 100%.
Bootstrap support for Q55727 as seed ortholog is 100%.

Group of orthologs #345. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3JFE4              	100.00%		P73759              	100.00%
G3JFM3              	13.99%		
Bootstrap support for G3JFE4 as seed ortholog is 100%.
Bootstrap support for P73759 as seed ortholog is 100%.

Group of orthologs #346. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3J8S2              	100.00%		P74643              	100.00%
Bootstrap support for G3J8S2 as seed ortholog is 100%.
Bootstrap support for P74643 as seed ortholog is 100%.

Group of orthologs #347. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3JFW3              	100.00%		P73448              	100.00%
Bootstrap support for G3JFW3 as seed ortholog is 100%.
Bootstrap support for P73448 as seed ortholog is 100%.

Group of orthologs #348. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3JD96              	100.00%		P74432              	100.00%
Bootstrap support for G3JD96 as seed ortholog is 100%.
Bootstrap support for P74432 as seed ortholog is 100%.

Group of orthologs #349. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3JBC7              	100.00%		Q55930              	100.00%
Bootstrap support for G3JBC7 as seed ortholog is 100%.
Bootstrap support for Q55930 as seed ortholog is 100%.

Group of orthologs #350. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3JR73              	100.00%		P74328              	100.00%
Bootstrap support for G3JR73 as seed ortholog is 100%.
Bootstrap support for P74328 as seed ortholog is 100%.

Group of orthologs #351. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 Synechocystis.sp.:82

G3JUZ8              	100.00%		Q55535              	100.00%
Bootstrap support for G3JUZ8 as seed ortholog is 100%.
Bootstrap support for Q55535 as seed ortholog is 100%.

Group of orthologs #352. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 Synechocystis.sp.:81

G3JKT7              	100.00%		P74334              	100.00%
                    	       		P74370              	100.00%
Bootstrap support for G3JKT7 as seed ortholog is 100%.
Bootstrap support for P74334 as seed ortholog is 100%.
Bootstrap support for P74370 as seed ortholog is 100%.

Group of orthologs #353. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 Synechocystis.sp.:81

G3J7A6              	100.00%		P73296              	100.00%
Bootstrap support for G3J7A6 as seed ortholog is 100%.
Bootstrap support for P73296 as seed ortholog is 100%.

Group of orthologs #354. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 Synechocystis.sp.:81

G3JM30              	100.00%		Q05971              	100.00%
Bootstrap support for G3JM30 as seed ortholog is 100%.
Bootstrap support for Q05971 as seed ortholog is 100%.

Group of orthologs #355. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:11 Synechocystis.sp.:80

G3J3H0              	100.00%		P74200              	100.00%
Bootstrap support for G3J3H0 as seed ortholog is 57%.
Alternative seed ortholog is G3JEA9 (11 bits away from this cluster)
Bootstrap support for P74200 as seed ortholog is 100%.

Group of orthologs #356. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:13 Synechocystis.sp.:80

G3J7E6              	100.00%		P73809              	100.00%
Bootstrap support for G3J7E6 as seed ortholog is 63%.
Alternative seed ortholog is G3JCK4 (13 bits away from this cluster)
Bootstrap support for P73809 as seed ortholog is 100%.

Group of orthologs #357. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:27 Synechocystis.sp.:79

G3J4D8              	100.00%		P54735              	100.00%
G3J991              	19.42%		
G3JRS3              	6.76%		
G3JAB2              	5.67%		
G3JAU0              	5.19%		
Bootstrap support for G3J4D8 as seed ortholog is 77%.
Bootstrap support for P54735 as seed ortholog is 100%.

Group of orthologs #358. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:22 Synechocystis.sp.:79

G3JK55              	100.00%		Q57014              	100.00%
G3JGG8              	6.69%		P73557              	46.83%
Bootstrap support for G3JK55 as seed ortholog is 71%.
Alternative seed ortholog is G3JFT7 (22 bits away from this cluster)
Bootstrap support for Q57014 as seed ortholog is 100%.

Group of orthologs #359. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 Synechocystis.sp.:79

G3JLM5              	100.00%		Q46363              	100.00%
G3J9H2              	7.55%		
Bootstrap support for G3JLM5 as seed ortholog is 100%.
Bootstrap support for Q46363 as seed ortholog is 100%.

Group of orthologs #360. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 Synechocystis.sp.:79

G3J958              	100.00%		Q55371              	100.00%
Bootstrap support for G3J958 as seed ortholog is 100%.
Bootstrap support for Q55371 as seed ortholog is 100%.

Group of orthologs #361. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 Synechocystis.sp.:79

G3JEB7              	100.00%		Q55170              	100.00%
Bootstrap support for G3JEB7 as seed ortholog is 100%.
Bootstrap support for Q55170 as seed ortholog is 100%.

Group of orthologs #362. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:26 Synechocystis.sp.:78

G3JT16              	100.00%		P74474              	100.00%
G3JNU9              	11.09%		
G3JPJ4              	11.09%		
G3J5J0              	10.47%		
Bootstrap support for G3JT16 as seed ortholog is 71%.
Alternative seed ortholog is G3JEA9 (26 bits away from this cluster)
Bootstrap support for P74474 as seed ortholog is 100%.

Group of orthologs #363. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 Synechocystis.sp.:19

G3J4S0              	100.00%		P73329              	100.00%
                    	       		Q55619              	9.52%
                    	       		Q55816              	8.26%
Bootstrap support for G3J4S0 as seed ortholog is 100%.
Bootstrap support for P73329 as seed ortholog is 73%.
Alternative seed ortholog is P73898 (19 bits away from this cluster)

Group of orthologs #364. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:10 Synechocystis.sp.:77

G3JHF4              	100.00%		Q6ZEP4              	100.00%
G3JLJ4              	30.69%		
G3JGR4              	11.68%		
Bootstrap support for G3JHF4 as seed ortholog is 57%.
Alternative seed ortholog is G3JIB4 (10 bits away from this cluster)
Bootstrap support for Q6ZEP4 as seed ortholog is 100%.

Group of orthologs #365. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 Synechocystis.sp.:77

G3JAX0              	100.00%		P74514              	100.00%
Bootstrap support for G3JAX0 as seed ortholog is 100%.
Bootstrap support for P74514 as seed ortholog is 100%.

Group of orthologs #366. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 Synechocystis.sp.:77

G3JL20              	100.00%		P73527              	100.00%
Bootstrap support for G3JL20 as seed ortholog is 100%.
Bootstrap support for P73527 as seed ortholog is 100%.

Group of orthologs #367. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 Synechocystis.sp.:77

G3JN75              	100.00%		Q55503              	100.00%
Bootstrap support for G3JN75 as seed ortholog is 100%.
Bootstrap support for Q55503 as seed ortholog is 100%.

Group of orthologs #368. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:21 Synechocystis.sp.:75

G3JGP7              	100.00%		P54691              	100.00%
G3JUT9              	30.04%		
G3JL56              	5.21%		
Bootstrap support for G3JGP7 as seed ortholog is 71%.
Alternative seed ortholog is G3JRJ1 (21 bits away from this cluster)
Bootstrap support for P54691 as seed ortholog is 100%.

Group of orthologs #369. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 Synechocystis.sp.:75

G3J5J9              	100.00%		P23349              	100.00%
Bootstrap support for G3J5J9 as seed ortholog is 100%.
Bootstrap support for P23349 as seed ortholog is 100%.

Group of orthologs #370. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 Synechocystis.sp.:75

G3J7Y7              	100.00%		Q54735              	100.00%
Bootstrap support for G3J7Y7 as seed ortholog is 100%.
Bootstrap support for Q54735 as seed ortholog is 100%.

Group of orthologs #371. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 Synechocystis.sp.:75

G3JHX0              	100.00%		P72855              	100.00%
Bootstrap support for G3JHX0 as seed ortholog is 100%.
Bootstrap support for P72855 as seed ortholog is 100%.

Group of orthologs #372. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:26 Synechocystis.sp.:75

G3JPB2              	100.00%		P36236              	100.00%
Bootstrap support for G3JPB2 as seed ortholog is 85%.
Bootstrap support for P36236 as seed ortholog is 100%.

Group of orthologs #373. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 Synechocystis.sp.:74

G3JNG2              	100.00%		P26525              	100.00%
Bootstrap support for G3JNG2 as seed ortholog is 100%.
Bootstrap support for P26525 as seed ortholog is 100%.

Group of orthologs #374. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 Synechocystis.sp.:73

G3JIZ0              	100.00%		Q55857              	100.00%
G3JDP9              	28.34%		
G3JK75              	27.35%		
G3JCE5              	24.73%		
G3JKC3              	21.99%		
G3JA75              	21.01%		
G3J8V0              	20.13%		
G3JRP9              	19.58%		
G3JKG5              	9.74%		
G3JIK4              	7.88%		
G3JAI2              	7.66%		
G3JAY7              	5.80%		
G3J7Q6              	5.58%		
G3JGD0              	5.25%		
Bootstrap support for G3JIZ0 as seed ortholog is 100%.
Bootstrap support for Q55857 as seed ortholog is 100%.

Group of orthologs #375. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 Synechocystis.sp.:73

G3J8Z4              	100.00%		Q6YRX0              	100.00%
                    	       		Q6ZEM3              	98.62%
Bootstrap support for G3J8Z4 as seed ortholog is 100%.
Bootstrap support for Q6YRX0 as seed ortholog is 100%.

Group of orthologs #376. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 Synechocystis.sp.:73

G3JI27              	100.00%		P73504              	100.00%
Bootstrap support for G3JI27 as seed ortholog is 100%.
Bootstrap support for P73504 as seed ortholog is 100%.

Group of orthologs #377. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 Synechocystis.sp.:72

G3J9M5              	100.00%		P73784              	100.00%
G3J8J9              	54.35%		
G3J9P9              	19.18%		
G3J8M3              	18.68%		
G3J6F4              	14.29%		
G3JE82              	14.09%		
G3J6S3              	13.29%		
G3JN19              	12.89%		
G3J6F9              	12.29%		
G3JP63              	11.39%		
G3JNI0              	11.09%		
G3J2Y8              	10.39%		
G3JKR3              	9.79%		
G3JHI2              	8.89%		
G3JU66              	8.79%		
G3JPE8              	8.49%		
G3JT02              	8.29%		
G3JMI8              	8.19%		
G3JJ57              	7.29%		
G3J3C5              	7.19%		
G3JDZ1              	6.89%		
G3JTF4              	6.09%		
G3JS68              	5.69%		
Bootstrap support for G3J9M5 as seed ortholog is 100%.
Bootstrap support for P73784 as seed ortholog is 100%.

Group of orthologs #378. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 Synechocystis.sp.:72

G3J488              	100.00%		P72703              	100.00%
Bootstrap support for G3J488 as seed ortholog is 100%.
Bootstrap support for P72703 as seed ortholog is 100%.

Group of orthologs #379. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 Synechocystis.sp.:72

G3JEM1              	100.00%		P52056              	100.00%
Bootstrap support for G3JEM1 as seed ortholog is 100%.
Bootstrap support for P52056 as seed ortholog is 100%.

Group of orthologs #380. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 Synechocystis.sp.:72

G3JD64              	100.00%		P73299              	100.00%
Bootstrap support for G3JD64 as seed ortholog is 100%.
Bootstrap support for P73299 as seed ortholog is 100%.

Group of orthologs #381. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 Synechocystis.sp.:72

G3JI94              	100.00%		P74591              	100.00%
Bootstrap support for G3JI94 as seed ortholog is 100%.
Bootstrap support for P74591 as seed ortholog is 100%.

Group of orthologs #382. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:19 Synechocystis.sp.:71

G3J5Z8              	100.00%		P73298              	100.00%
Bootstrap support for G3J5Z8 as seed ortholog is 75%.
Bootstrap support for P73298 as seed ortholog is 100%.

Group of orthologs #383. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 Synechocystis.sp.:71

G3JDJ0              	100.00%		P74709              	100.00%
Bootstrap support for G3JDJ0 as seed ortholog is 100%.
Bootstrap support for P74709 as seed ortholog is 100%.

Group of orthologs #384. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 Synechocystis.sp.:71

G3JHB7              	100.00%		P74372              	100.00%
Bootstrap support for G3JHB7 as seed ortholog is 100%.
Bootstrap support for P74372 as seed ortholog is 100%.

Group of orthologs #385. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 Synechocystis.sp.:70

G3JEK4              	100.00%		P27180              	100.00%
Bootstrap support for G3JEK4 as seed ortholog is 100%.
Bootstrap support for P27180 as seed ortholog is 100%.

Group of orthologs #386. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:4 Synechocystis.sp.:70

G3JTZ6              	100.00%		Q55139              	100.00%
Bootstrap support for G3JTZ6 as seed ortholog is 49%.
Alternative seed ortholog is G3JMU3 (4 bits away from this cluster)
Bootstrap support for Q55139 as seed ortholog is 100%.

Group of orthologs #387. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:11 Synechocystis.sp.:69

G3J3C0              	100.00%		P72953              	100.00%
Bootstrap support for G3J3C0 as seed ortholog is 56%.
Alternative seed ortholog is G3JET9 (11 bits away from this cluster)
Bootstrap support for P72953 as seed ortholog is 100%.

Group of orthologs #388. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 Synechocystis.sp.:68

G3J993              	100.00%		Q55653              	100.00%
Bootstrap support for G3J993 as seed ortholog is 100%.
Bootstrap support for Q55653 as seed ortholog is 100%.

Group of orthologs #389. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 Synechocystis.sp.:5

G3JG72              	100.00%		P73428              	100.00%
G3JRY5              	58.49%		
G3J3T9              	36.22%		
Bootstrap support for G3JG72 as seed ortholog is 100%.
Bootstrap support for P73428 as seed ortholog is 50%.
Alternative seed ortholog is P20388 (5 bits away from this cluster)

Group of orthologs #390. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 Synechocystis.sp.:67

G3J823              	100.00%		P73316              	100.00%
Bootstrap support for G3J823 as seed ortholog is 100%.
Bootstrap support for P73316 as seed ortholog is 100%.

Group of orthologs #391. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 Synechocystis.sp.:67

G3JF19              	100.00%		P74292              	100.00%
Bootstrap support for G3JF19 as seed ortholog is 100%.
Bootstrap support for P74292 as seed ortholog is 100%.

Group of orthologs #392. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:18 Synechocystis.sp.:67

G3JRH8              	100.00%		P73192              	100.00%
Bootstrap support for G3JRH8 as seed ortholog is 71%.
Alternative seed ortholog is G3JLK5 (18 bits away from this cluster)
Bootstrap support for P73192 as seed ortholog is 100%.

Group of orthologs #393. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 Synechocystis.sp.:66

G3J3E9              	100.00%		P73161              	100.00%
Bootstrap support for G3J3E9 as seed ortholog is 100%.
Bootstrap support for P73161 as seed ortholog is 100%.

Group of orthologs #394. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 Synechocystis.sp.:65

G3J6H4              	100.00%		Q59978              	100.00%
Bootstrap support for G3J6H4 as seed ortholog is 100%.
Bootstrap support for Q59978 as seed ortholog is 100%.

Group of orthologs #395. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 Synechocystis.sp.:65

G3JLP3              	100.00%		P72886              	100.00%
Bootstrap support for G3JLP3 as seed ortholog is 100%.
Bootstrap support for P72886 as seed ortholog is 100%.

Group of orthologs #396. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 Synechocystis.sp.:65

G3JV25              	100.00%		P73049              	100.00%
Bootstrap support for G3JV25 as seed ortholog is 100%.
Bootstrap support for P73049 as seed ortholog is 100%.

Group of orthologs #397. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 Synechocystis.sp.:64

G3JUG1              	100.00%		P72650              	100.00%
Bootstrap support for G3JUG1 as seed ortholog is 100%.
Bootstrap support for P72650 as seed ortholog is 100%.

Group of orthologs #398. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 Synechocystis.sp.:6

G3JUE2              	100.00%		Q55809              	100.00%
Bootstrap support for G3JUE2 as seed ortholog is 100%.
Bootstrap support for Q55809 as seed ortholog is 62%.
Alternative seed ortholog is P74439 (6 bits away from this cluster)

Group of orthologs #399. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:5 Synechocystis.sp.:62

G3JE03              	100.00%		P73469              	100.00%
G3JCW5              	100.00%		P74297              	100.00%
G3J3V3              	38.01%		
G3JV00              	33.63%		
G3JFD3              	17.65%		
G3JGQ8              	15.99%		
G3JH82              	15.84%		
G3JH49              	15.27%		
G3J9E3              	14.78%		
G3JD52              	11.61%		
G3JDQ5              	10.11%		
G3JV31              	8.60%		
G3JPL1              	5.88%		
Bootstrap support for G3JE03 as seed ortholog is 55%.
Alternative seed ortholog is G3J5G7 (5 bits away from this cluster)
Bootstrap support for G3JCW5 as seed ortholog is 66%.
Alternative seed ortholog is G3J5G7 (5 bits away from this cluster)
Bootstrap support for P73469 as seed ortholog is 100%.
Bootstrap support for P74297 as seed ortholog is 100%.

Group of orthologs #400. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 Synechocystis.sp.:62

G3J815              	100.00%		Q55507              	100.00%
G3J9R9              	21.50%		
G3JDK8              	21.20%		
Bootstrap support for G3J815 as seed ortholog is 100%.
Bootstrap support for Q55507 as seed ortholog is 100%.

Group of orthologs #401. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 Synechocystis.sp.:62

G3JIZ1              	100.00%		P74594              	100.00%
Bootstrap support for G3JIZ1 as seed ortholog is 100%.
Bootstrap support for P74594 as seed ortholog is 100%.

Group of orthologs #402. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 Synechocystis.sp.:61

G3J3K3              	100.00%		P73481              	100.00%
Bootstrap support for G3J3K3 as seed ortholog is 100%.
Bootstrap support for P73481 as seed ortholog is 100%.

Group of orthologs #403. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 Synechocystis.sp.:14

G3JU49              	100.00%		P74388              	100.00%
Bootstrap support for G3JU49 as seed ortholog is 100%.
Bootstrap support for P74388 as seed ortholog is 71%.
Alternative seed ortholog is Q6ZE71 (14 bits away from this cluster)

Group of orthologs #404. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:13 Synechocystis.sp.:60

G3JNV0              	100.00%		P52231              	100.00%
                    	       		P52232              	20.25%
                    	       		P73263              	18.99%
Bootstrap support for G3JNV0 as seed ortholog is 73%.
Alternative seed ortholog is G3J3E7 (13 bits away from this cluster)
Bootstrap support for P52231 as seed ortholog is 100%.

Group of orthologs #405. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 Synechocystis.sp.:60

G3J8W0              	100.00%		Q55548              	100.00%
Bootstrap support for G3J8W0 as seed ortholog is 100%.
Bootstrap support for Q55548 as seed ortholog is 100%.

Group of orthologs #406. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 Synechocystis.sp.:60

G3JL28              	100.00%		P74737              	100.00%
Bootstrap support for G3JL28 as seed ortholog is 100%.
Bootstrap support for P74737 as seed ortholog is 100%.

Group of orthologs #407. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 Synechocystis.sp.:60

G3JV36              	100.00%		P19045              	100.00%
Bootstrap support for G3JV36 as seed ortholog is 100%.
Bootstrap support for P19045 as seed ortholog is 100%.

Group of orthologs #408. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 Synechocystis.sp.:59

G3J600              	100.00%		P72731              	100.00%
                    	       		P74596              	9.14%
Bootstrap support for G3J600 as seed ortholog is 100%.
Bootstrap support for P72731 as seed ortholog is 100%.

Group of orthologs #409. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 Synechocystis.sp.:59

G3J4C1              	100.00%		P72934              	100.00%
Bootstrap support for G3J4C1 as seed ortholog is 100%.
Bootstrap support for P72934 as seed ortholog is 100%.

Group of orthologs #410. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 Synechocystis.sp.:58

G3JNE2              	100.00%		P74150              	100.00%
G3JAM4              	15.94%		
Bootstrap support for G3JNE2 as seed ortholog is 100%.
Bootstrap support for P74150 as seed ortholog is 100%.

Group of orthologs #411. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 Synechocystis.sp.:57

G3JI37              	100.00%		P73212              	100.00%
G3J4W5              	17.43%		
G3JEX5              	6.66%		
Bootstrap support for G3JI37 as seed ortholog is 100%.
Bootstrap support for P73212 as seed ortholog is 100%.

Group of orthologs #412. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 Synechocystis.sp.:57

G3J340              	100.00%		P74805              	100.00%
Bootstrap support for G3J340 as seed ortholog is 100%.
Bootstrap support for P74805 as seed ortholog is 100%.

Group of orthologs #413. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 Synechocystis.sp.:57

G3J780              	100.00%		P74331              	100.00%
Bootstrap support for G3J780 as seed ortholog is 100%.
Bootstrap support for P74331 as seed ortholog is 100%.

Group of orthologs #414. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:4 Synechocystis.sp.:57

G3JL50              	100.00%		Q59987              	100.00%
Bootstrap support for G3JL50 as seed ortholog is 53%.
Alternative seed ortholog is G3JBR5 (4 bits away from this cluster)
Bootstrap support for Q59987 as seed ortholog is 100%.

Group of orthologs #415. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 Synechocystis.sp.:56

G3J7V8              	100.00%		P74226              	100.00%
Bootstrap support for G3J7V8 as seed ortholog is 100%.
Bootstrap support for P74226 as seed ortholog is 100%.

Group of orthologs #416. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 Synechocystis.sp.:56

G3J954              	100.00%		P74003              	100.00%
Bootstrap support for G3J954 as seed ortholog is 100%.
Bootstrap support for P74003 as seed ortholog is 100%.

Group of orthologs #417. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 Synechocystis.sp.:56

G3JAN8              	100.00%		P74519              	100.00%
Bootstrap support for G3JAN8 as seed ortholog is 100%.
Bootstrap support for P74519 as seed ortholog is 100%.

Group of orthologs #418. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 Synechocystis.sp.:56

G3JDE4              	100.00%		P73835              	100.00%
Bootstrap support for G3JDE4 as seed ortholog is 100%.
Bootstrap support for P73835 as seed ortholog is 100%.

Group of orthologs #419. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 Synechocystis.sp.:56

G3JQD2              	100.00%		Q55474              	100.00%
Bootstrap support for G3JQD2 as seed ortholog is 100%.
Bootstrap support for Q55474 as seed ortholog is 100%.

Group of orthologs #420. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 Synechocystis.sp.:55

G3JCY2              	100.00%		P72969              	100.00%
G3JDM6              	16.52%		
Bootstrap support for G3JCY2 as seed ortholog is 100%.
Bootstrap support for P72969 as seed ortholog is 100%.

Group of orthologs #421. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 Synechocystis.sp.:54

G3JFW5              	100.00%		P74368              	100.00%
                    	       		Q55637              	6.62%
Bootstrap support for G3JFW5 as seed ortholog is 100%.
Bootstrap support for P74368 as seed ortholog is 100%.

Group of orthologs #422. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 Synechocystis.sp.:54

G3JTB3              	100.00%		Q55488              	100.00%
G3JSG4              	26.17%		
Bootstrap support for G3JTB3 as seed ortholog is 100%.
Bootstrap support for Q55488 as seed ortholog is 100%.

Group of orthologs #423. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 Synechocystis.sp.:54

G3JU92              	100.00%		P72660              	100.00%
Bootstrap support for G3JU92 as seed ortholog is 100%.
Bootstrap support for P72660 as seed ortholog is 100%.

Group of orthologs #424. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 Synechocystis.sp.:53

G3JB14              	100.00%		Q55962              	100.00%
G3JAR7              	28.02%		
G3JSU5              	23.33%		
G3JRB8              	23.23%		
G3JCJ9              	18.25%		
G3JNC2              	17.15%		
G3JUJ1              	14.46%		
G3JB85              	14.16%		
G3JRR0              	12.26%		
G3J556              	12.26%		
G3JRN4              	11.76%		
G3J861              	11.17%		
G3J5C8              	10.47%		
G3JMX6              	9.27%		
G3JC27              	8.28%		
G3JB54              	7.98%		
Bootstrap support for G3JB14 as seed ortholog is 100%.
Bootstrap support for Q55962 as seed ortholog is 100%.

Group of orthologs #425. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 Synechocystis.sp.:53

G3JBD8              	100.00%		Q55480              	100.00%
Bootstrap support for G3JBD8 as seed ortholog is 100%.
Bootstrap support for Q55480 as seed ortholog is 100%.

Group of orthologs #426. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 Synechocystis.sp.:52

G3JEF3              	100.00%		Q55574              	100.00%
Bootstrap support for G3JEF3 as seed ortholog is 100%.
Bootstrap support for Q55574 as seed ortholog is 100%.

Group of orthologs #427. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 Synechocystis.sp.:51

G3J683              	100.00%		P74234              	100.00%
G3JT66              	57.49%		
Bootstrap support for G3J683 as seed ortholog is 100%.
Bootstrap support for P74234 as seed ortholog is 100%.

Group of orthologs #428. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 Synechocystis.sp.:51

G3JU53              	100.00%		Q55593              	100.00%
Bootstrap support for G3JU53 as seed ortholog is 100%.
Bootstrap support for Q55593 as seed ortholog is 100%.

Group of orthologs #429. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 Synechocystis.sp.:50

G3J709              	100.00%		P73717              	100.00%
                    	       		Q55162              	6.57%
Bootstrap support for G3J709 as seed ortholog is 100%.
Bootstrap support for P73717 as seed ortholog is 100%.

Group of orthologs #430. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 Synechocystis.sp.:50

G3JLP5              	100.00%		P73648              	100.00%
                    	       		P74027              	6.64%
Bootstrap support for G3JLP5 as seed ortholog is 100%.
Bootstrap support for P73648 as seed ortholog is 100%.

Group of orthologs #431. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 Synechocystis.sp.:50

G3JEN0              	100.00%		P73163              	100.00%
Bootstrap support for G3JEN0 as seed ortholog is 100%.
Bootstrap support for P73163 as seed ortholog is 100%.

Group of orthologs #432. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 Synechocystis.sp.:49

G3JMM4              	100.00%		Q55734              	100.00%
                    	       		P73454              	49.09%
Bootstrap support for G3JMM4 as seed ortholog is 100%.
Bootstrap support for Q55734 as seed ortholog is 100%.

Group of orthologs #433. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 Synechocystis.sp.:49

G3JF80              	100.00%		P74410              	100.00%
Bootstrap support for G3JF80 as seed ortholog is 100%.
Bootstrap support for P74410 as seed ortholog is 100%.

Group of orthologs #434. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 Synechocystis.sp.:49

G3JM05              	100.00%		P73715              	100.00%
Bootstrap support for G3JM05 as seed ortholog is 100%.
Bootstrap support for P73715 as seed ortholog is 100%.

Group of orthologs #435. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 Synechocystis.sp.:3

G3JJM2              	100.00%		P72762              	100.00%
Bootstrap support for G3JJM2 as seed ortholog is 100%.
Bootstrap support for P72762 as seed ortholog is 53%.
Alternative seed ortholog is P74746 (3 bits away from this cluster)

Group of orthologs #436. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 Synechocystis.sp.:47

G3J4G0              	100.00%		P74285              	100.00%
                    	       		Q55689              	9.45%
                    	       		Q55668              	5.62%
Bootstrap support for G3J4G0 as seed ortholog is 100%.
Bootstrap support for P74285 as seed ortholog is 100%.

Group of orthologs #437. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 Synechocystis.sp.:47

G3JJ08              	100.00%		P72864              	100.00%
G3JJ54              	62.28%		
Bootstrap support for G3JJ08 as seed ortholog is 100%.
Bootstrap support for P72864 as seed ortholog is 100%.

Group of orthologs #438. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 Synechocystis.sp.:47

G3J301              	100.00%		P74229              	100.00%
Bootstrap support for G3J301 as seed ortholog is 100%.
Bootstrap support for P74229 as seed ortholog is 100%.

Group of orthologs #439. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 Synechocystis.sp.:47

G3JDE7              	100.00%		P73847              	100.00%
Bootstrap support for G3JDE7 as seed ortholog is 100%.
Bootstrap support for P73847 as seed ortholog is 100%.

Group of orthologs #440. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 Synechocystis.sp.:47

G3JJ69              	100.00%		P73308              	100.00%
Bootstrap support for G3JJ69 as seed ortholog is 100%.
Bootstrap support for P73308 as seed ortholog is 100%.

Group of orthologs #441. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 Synechocystis.sp.:46

G3JK13              	100.00%		Q55390              	100.00%
                    	       		P73115              	6.01%
Bootstrap support for G3JK13 as seed ortholog is 100%.
Bootstrap support for Q55390 as seed ortholog is 100%.

Group of orthologs #442. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 Synechocystis.sp.:46

G3J459              	100.00%		P73055              	100.00%
Bootstrap support for G3J459 as seed ortholog is 100%.
Bootstrap support for P73055 as seed ortholog is 100%.

Group of orthologs #443. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 Synechocystis.sp.:46

G3JDB3              	100.00%		P73795              	100.00%
Bootstrap support for G3JDB3 as seed ortholog is 100%.
Bootstrap support for P73795 as seed ortholog is 100%.

Group of orthologs #444. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 Synechocystis.sp.:46

G3JJ32              	100.00%		P73521              	100.00%
Bootstrap support for G3JJ32 as seed ortholog is 100%.
Bootstrap support for P73521 as seed ortholog is 100%.

Group of orthologs #445. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 Synechocystis.sp.:45

G3JPG6              	100.00%		P73170              	100.00%
G3JHZ1              	43.50%		
Bootstrap support for G3JPG6 as seed ortholog is 100%.
Bootstrap support for P73170 as seed ortholog is 100%.

Group of orthologs #446. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 Synechocystis.sp.:45

G3J8Q0              	100.00%		Q55765              	100.00%
Bootstrap support for G3J8Q0 as seed ortholog is 100%.
Bootstrap support for Q55765 as seed ortholog is 100%.

Group of orthologs #447. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 Synechocystis.sp.:45

G3JQG4              	100.00%		P74447              	100.00%
Bootstrap support for G3JQG4 as seed ortholog is 100%.
Bootstrap support for P74447 as seed ortholog is 100%.

Group of orthologs #448. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 Synechocystis.sp.:44

G3JUG2              	100.00%		P73986              	100.00%
G3JFT0              	39.25%		
Bootstrap support for G3JUG2 as seed ortholog is 100%.
Bootstrap support for P73986 as seed ortholog is 100%.

Group of orthologs #449. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 Synechocystis.sp.:44

G3JBU3              	100.00%		P74498              	100.00%
Bootstrap support for G3JBU3 as seed ortholog is 100%.
Bootstrap support for P74498 as seed ortholog is 100%.

Group of orthologs #450. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 Synechocystis.sp.:44

G3JI58              	100.00%		P48944              	100.00%
Bootstrap support for G3JI58 as seed ortholog is 100%.
Bootstrap support for P48944 as seed ortholog is 100%.

Group of orthologs #451. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:1 Synechocystis.sp.:43

G3J597              	100.00%		P73307              	100.00%
Bootstrap support for G3J597 as seed ortholog is 46%.
Alternative seed ortholog is G3JIB0 (1 bits away from this cluster)
Bootstrap support for P73307 as seed ortholog is 100%.

Group of orthologs #452. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 Synechocystis.sp.:43

G3JAS0              	100.00%		P72649              	100.00%
Bootstrap support for G3JAS0 as seed ortholog is 100%.
Bootstrap support for P72649 as seed ortholog is 100%.

Group of orthologs #453. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 Synechocystis.sp.:42

G3JB55              	100.00%		P73471              	100.00%
G3JTJ8              	26.21%		
Bootstrap support for G3JB55 as seed ortholog is 100%.
Bootstrap support for P73471 as seed ortholog is 100%.

Group of orthologs #454. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 Synechocystis.sp.:42

G3JMR6              	100.00%		P48939              	100.00%
Bootstrap support for G3JMR6 as seed ortholog is 100%.
Bootstrap support for P48939 as seed ortholog is 100%.

Group of orthologs #455. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 Synechocystis.sp.:41

G3J3R1              	100.00%		P73467              	100.00%
Bootstrap support for G3J3R1 as seed ortholog is 100%.
Bootstrap support for P73467 as seed ortholog is 100%.

Group of orthologs #456. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 Synechocystis.sp.:41

G3JM45              	100.00%		P73157              	100.00%
Bootstrap support for G3JM45 as seed ortholog is 100%.
Bootstrap support for P73157 as seed ortholog is 100%.

Group of orthologs #457. Best score 40 bits
Score difference with first non-orthologous sequence - C.militaris:40 Synechocystis.sp.:40

G3J9X8              	100.00%		P74348              	100.00%
Bootstrap support for G3J9X8 as seed ortholog is 100%.
Bootstrap support for P74348 as seed ortholog is 100%.