###################################
3126 groups of orthologs
3294 in-paralogs from C.militaris
3412 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3220 bits
Score difference with first non-orthologous sequence - C.militaris:3220 S.stipitis:3220

G3J5Z4              	100.00%		A3LYV9              	100.00%
Bootstrap support for G3J5Z4 as seed ortholog is 100%.
Bootstrap support for A3LYV9 as seed ortholog is 100%.

Group of orthologs #2. Best score 2951 bits
Score difference with first non-orthologous sequence - C.militaris:2951 S.stipitis:2951

G3JB11              	100.00%		A3LQK2              	100.00%
Bootstrap support for G3JB11 as seed ortholog is 100%.
Bootstrap support for A3LQK2 as seed ortholog is 100%.

Group of orthologs #3. Best score 2832 bits
Score difference with first non-orthologous sequence - C.militaris:2832 S.stipitis:2832

G3JDT0              	100.00%		A3LXW2              	100.00%
Bootstrap support for G3JDT0 as seed ortholog is 100%.
Bootstrap support for A3LXW2 as seed ortholog is 100%.

Group of orthologs #4. Best score 2830 bits
Score difference with first non-orthologous sequence - C.militaris:2830 S.stipitis:2830

G3J5J8              	100.00%		A3LSZ4              	100.00%
Bootstrap support for G3J5J8 as seed ortholog is 100%.
Bootstrap support for A3LSZ4 as seed ortholog is 100%.

Group of orthologs #5. Best score 2808 bits
Score difference with first non-orthologous sequence - C.militaris:2808 S.stipitis:2808

G3JE06              	100.00%		A3LZU2              	100.00%
Bootstrap support for G3JE06 as seed ortholog is 100%.
Bootstrap support for A3LZU2 as seed ortholog is 100%.

Group of orthologs #6. Best score 2761 bits
Score difference with first non-orthologous sequence - C.militaris:2761 S.stipitis:2761

G3JUL1              	100.00%		A3GH39              	100.00%
Bootstrap support for G3JUL1 as seed ortholog is 100%.
Bootstrap support for A3GH39 as seed ortholog is 100%.

Group of orthologs #7. Best score 2434 bits
Score difference with first non-orthologous sequence - C.militaris:2434 S.stipitis:2434

G3J888              	100.00%		A3GHG3              	100.00%
Bootstrap support for G3J888 as seed ortholog is 100%.
Bootstrap support for A3GHG3 as seed ortholog is 100%.

Group of orthologs #8. Best score 2337 bits
Score difference with first non-orthologous sequence - C.militaris:2337 S.stipitis:561

G3J3K0              	100.00%		A3LR89              	100.00%
Bootstrap support for G3J3K0 as seed ortholog is 100%.
Bootstrap support for A3LR89 as seed ortholog is 100%.

Group of orthologs #9. Best score 2315 bits
Score difference with first non-orthologous sequence - C.militaris:2315 S.stipitis:2315

G3J887              	100.00%		A3LZH0              	100.00%
Bootstrap support for G3J887 as seed ortholog is 100%.
Bootstrap support for A3LZH0 as seed ortholog is 100%.

Group of orthologs #10. Best score 2289 bits
Score difference with first non-orthologous sequence - C.militaris:2289 S.stipitis:2289

G3J2I7              	100.00%		A3GH59              	100.00%
Bootstrap support for G3J2I7 as seed ortholog is 100%.
Bootstrap support for A3GH59 as seed ortholog is 100%.

Group of orthologs #11. Best score 2219 bits
Score difference with first non-orthologous sequence - C.militaris:2219 S.stipitis:2219

G3JF86              	100.00%		A3LYF1              	100.00%
Bootstrap support for G3JF86 as seed ortholog is 100%.
Bootstrap support for A3LYF1 as seed ortholog is 100%.

Group of orthologs #12. Best score 2183 bits
Score difference with first non-orthologous sequence - C.militaris:2183 S.stipitis:2183

G3J7V3              	100.00%		A3LPB9              	100.00%
Bootstrap support for G3J7V3 as seed ortholog is 100%.
Bootstrap support for A3LPB9 as seed ortholog is 100%.

Group of orthologs #13. Best score 1931 bits
Score difference with first non-orthologous sequence - C.militaris:1931 S.stipitis:1931

G3JE54              	100.00%		A3LNR5              	100.00%
Bootstrap support for G3JE54 as seed ortholog is 100%.
Bootstrap support for A3LNR5 as seed ortholog is 100%.

Group of orthologs #14. Best score 1906 bits
Score difference with first non-orthologous sequence - C.militaris:1906 S.stipitis:1906

G3JJZ0              	100.00%		A3GID7              	100.00%
Bootstrap support for G3JJZ0 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #15. Best score 1884 bits
Score difference with first non-orthologous sequence - C.militaris:1884 S.stipitis:1884

G3JMH6              	100.00%		A3LV67              	100.00%
Bootstrap support for G3JMH6 as seed ortholog is 100%.
Bootstrap support for A3LV67 as seed ortholog is 100%.

Group of orthologs #16. Best score 1874 bits
Score difference with first non-orthologous sequence - C.militaris:1874 S.stipitis:1874

G3J8X1              	100.00%		A3LV05              	100.00%
Bootstrap support for G3J8X1 as seed ortholog is 100%.
Bootstrap support for A3LV05 as seed ortholog is 100%.

Group of orthologs #17. Best score 1797 bits
Score difference with first non-orthologous sequence - C.militaris:1797 S.stipitis:1797

G3JLQ3              	100.00%		A3GEY0              	100.00%
Bootstrap support for G3JLQ3 as seed ortholog is 100%.
Bootstrap support for A3GEY0 as seed ortholog is 100%.

Group of orthologs #18. Best score 1681 bits
Score difference with first non-orthologous sequence - C.militaris:1681 S.stipitis:1681

G3JN95              	100.00%		A3GFG5              	100.00%
Bootstrap support for G3JN95 as seed ortholog is 100%.
Bootstrap support for A3GFG5 as seed ortholog is 100%.

Group of orthologs #19. Best score 1632 bits
Score difference with first non-orthologous sequence - C.militaris:1632 S.stipitis:1632

G3J2U4              	100.00%		A3LUA0              	100.00%
Bootstrap support for G3J2U4 as seed ortholog is 100%.
Bootstrap support for A3LUA0 as seed ortholog is 100%.

Group of orthologs #20. Best score 1616 bits
Score difference with first non-orthologous sequence - C.militaris:504 S.stipitis:1616

G3J8E7              	100.00%		A3LYM8              	100.00%
Bootstrap support for G3J8E7 as seed ortholog is 100%.
Bootstrap support for A3LYM8 as seed ortholog is 100%.

Group of orthologs #21. Best score 1596 bits
Score difference with first non-orthologous sequence - C.militaris:1596 S.stipitis:1596

G3JLR1              	100.00%		A3M0G6              	100.00%
Bootstrap support for G3JLR1 as seed ortholog is 100%.
Bootstrap support for A3M0G6 as seed ortholog is 100%.

Group of orthologs #22. Best score 1537 bits
Score difference with first non-orthologous sequence - C.militaris:1537 S.stipitis:1537

G3J9A7              	100.00%		A3GEY3              	100.00%
Bootstrap support for G3J9A7 as seed ortholog is 100%.
Bootstrap support for A3GEY3 as seed ortholog is 100%.

Group of orthologs #23. Best score 1498 bits
Score difference with first non-orthologous sequence - C.militaris:1498 S.stipitis:1498

G3JPU2              	100.00%		A3LSZ2              	100.00%
Bootstrap support for G3JPU2 as seed ortholog is 100%.
Bootstrap support for A3LSZ2 as seed ortholog is 100%.

Group of orthologs #24. Best score 1450 bits
Score difference with first non-orthologous sequence - C.militaris:1450 S.stipitis:1450

G3JS57              	100.00%		A3LWA8              	100.00%
Bootstrap support for G3JS57 as seed ortholog is 100%.
Bootstrap support for A3LWA8 as seed ortholog is 100%.

Group of orthologs #25. Best score 1419 bits
Score difference with first non-orthologous sequence - C.militaris:896 S.stipitis:1419

G3JD91              	100.00%		A3GI45              	100.00%
Bootstrap support for G3JD91 as seed ortholog is 100%.
Bootstrap support for A3GI45 as seed ortholog is 100%.

Group of orthologs #26. Best score 1408 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:343

G3JN17              	100.00%		A3LZU3              	100.00%
                    	       		A3LUN9              	27.93%
                    	       		A3LMR6              	24.69%
                    	       		A3LTM4              	22.13%
Bootstrap support for G3JN17 as seed ortholog is 99%.
Bootstrap support for A3LZU3 as seed ortholog is 99%.

Group of orthologs #27. Best score 1405 bits
Score difference with first non-orthologous sequence - C.militaris:423 S.stipitis:430

G3JQT5              	100.00%		A3LPF9              	100.00%
Bootstrap support for G3JQT5 as seed ortholog is 100%.
Bootstrap support for A3LPF9 as seed ortholog is 100%.

Group of orthologs #28. Best score 1399 bits
Score difference with first non-orthologous sequence - C.militaris:1399 S.stipitis:1399

G3JB92              	100.00%		A3GF70              	100.00%
Bootstrap support for G3JB92 as seed ortholog is 100%.
Bootstrap support for A3GF70 as seed ortholog is 100%.

Group of orthologs #29. Best score 1395 bits
Score difference with first non-orthologous sequence - C.militaris:1395 S.stipitis:1395

G3JEV3              	100.00%		A3LP81              	100.00%
Bootstrap support for G3JEV3 as seed ortholog is 100%.
Bootstrap support for A3LP81 as seed ortholog is 100%.

Group of orthologs #30. Best score 1375 bits
Score difference with first non-orthologous sequence - C.militaris:1375 S.stipitis:1375

G3JPW1              	100.00%		A3LTD7              	100.00%
Bootstrap support for G3JPW1 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #31. Best score 1369 bits
Score difference with first non-orthologous sequence - C.militaris:1369 S.stipitis:1369

G3JDM8              	100.00%		A3LYS3              	100.00%
Bootstrap support for G3JDM8 as seed ortholog is 100%.
Bootstrap support for A3LYS3 as seed ortholog is 100%.

Group of orthologs #32. Best score 1360 bits
Score difference with first non-orthologous sequence - C.militaris:1284 S.stipitis:1360

G3J504              	100.00%		A3LZJ0              	100.00%
Bootstrap support for G3J504 as seed ortholog is 100%.
Bootstrap support for A3LZJ0 as seed ortholog is 100%.

Group of orthologs #33. Best score 1355 bits
Score difference with first non-orthologous sequence - C.militaris:1080 S.stipitis:1237

G3JSC8              	100.00%		A3LP36              	100.00%
Bootstrap support for G3JSC8 as seed ortholog is 100%.
Bootstrap support for A3LP36 as seed ortholog is 100%.

Group of orthologs #34. Best score 1350 bits
Score difference with first non-orthologous sequence - C.militaris:1350 S.stipitis:1350

G3JPS7              	100.00%		A3LZW8              	100.00%
Bootstrap support for G3JPS7 as seed ortholog is 100%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #35. Best score 1324 bits
Score difference with first non-orthologous sequence - C.militaris:1324 S.stipitis:116

G3JM20              	100.00%		A3LNC3              	100.00%
G3JJA9              	7.58%		
Bootstrap support for G3JM20 as seed ortholog is 100%.
Bootstrap support for A3LNC3 as seed ortholog is 94%.

Group of orthologs #36. Best score 1314 bits
Score difference with first non-orthologous sequence - C.militaris:1244 S.stipitis:1314

G3JA06              	100.00%		A3LZD5              	100.00%
Bootstrap support for G3JA06 as seed ortholog is 100%.
Bootstrap support for A3LZD5 as seed ortholog is 100%.

Group of orthologs #37. Best score 1309 bits
Score difference with first non-orthologous sequence - C.militaris:1207 S.stipitis:1309

G3JIQ5              	100.00%		A3LVX3              	100.00%
Bootstrap support for G3JIQ5 as seed ortholog is 100%.
Bootstrap support for A3LVX3 as seed ortholog is 100%.

Group of orthologs #38. Best score 1298 bits
Score difference with first non-orthologous sequence - C.militaris:1177 S.stipitis:1298

G3JKR7              	100.00%		A3LX00              	100.00%
Bootstrap support for G3JKR7 as seed ortholog is 100%.
Bootstrap support for A3LX00 as seed ortholog is 100%.

Group of orthologs #39. Best score 1297 bits
Score difference with first non-orthologous sequence - C.militaris:1297 S.stipitis:1297

G3JGW7              	100.00%		A3GHG4              	100.00%
Bootstrap support for G3JGW7 as seed ortholog is 100%.
Bootstrap support for A3GHG4 as seed ortholog is 100%.

Group of orthologs #40. Best score 1274 bits
Score difference with first non-orthologous sequence - C.militaris:1274 S.stipitis:1274

G3JDW6              	100.00%		A3LNB1              	100.00%
Bootstrap support for G3JDW6 as seed ortholog is 100%.
Bootstrap support for A3LNB1 as seed ortholog is 100%.

Group of orthologs #41. Best score 1262 bits
Score difference with first non-orthologous sequence - C.militaris:1262 S.stipitis:1262

G3JNR3              	100.00%		A3M082              	100.00%
Bootstrap support for G3JNR3 as seed ortholog is 100%.
Bootstrap support for A3M082 as seed ortholog is 100%.

Group of orthologs #42. Best score 1255 bits
Score difference with first non-orthologous sequence - C.militaris:1255 S.stipitis:1255

G3J4R0              	100.00%		A3LYU1              	100.00%
Bootstrap support for G3J4R0 as seed ortholog is 100%.
Bootstrap support for A3LYU1 as seed ortholog is 100%.

Group of orthologs #43. Best score 1253 bits
Score difference with first non-orthologous sequence - C.militaris:1253 S.stipitis:280

G3J7Z2              	100.00%		A3LNA5              	100.00%
Bootstrap support for G3J7Z2 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 100%.

Group of orthologs #44. Best score 1241 bits
Score difference with first non-orthologous sequence - C.militaris:1241 S.stipitis:1241

G3JRH4              	100.00%		A3LP60              	100.00%
Bootstrap support for G3JRH4 as seed ortholog is 100%.
Bootstrap support for A3LP60 as seed ortholog is 100%.

Group of orthologs #45. Best score 1233 bits
Score difference with first non-orthologous sequence - C.militaris:1233 S.stipitis:1233

G3JKE8              	100.00%		A3LVX8              	100.00%
Bootstrap support for G3JKE8 as seed ortholog is 100%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #46. Best score 1229 bits
Score difference with first non-orthologous sequence - C.militaris:1229 S.stipitis:1229

G3J470              	100.00%		A3LW26              	100.00%
Bootstrap support for G3J470 as seed ortholog is 100%.
Bootstrap support for A3LW26 as seed ortholog is 100%.

Group of orthologs #47. Best score 1226 bits
Score difference with first non-orthologous sequence - C.militaris:459 S.stipitis:591

G3J2Y1              	100.00%		A3GHE6              	100.00%
Bootstrap support for G3J2Y1 as seed ortholog is 100%.
Bootstrap support for A3GHE6 as seed ortholog is 100%.

Group of orthologs #48. Best score 1221 bits
Score difference with first non-orthologous sequence - C.militaris:1221 S.stipitis:1221

G3JE91              	100.00%		A3GF24              	100.00%
Bootstrap support for G3JE91 as seed ortholog is 100%.
Bootstrap support for A3GF24 as seed ortholog is 100%.

Group of orthologs #49. Best score 1218 bits
Score difference with first non-orthologous sequence - C.militaris:968 S.stipitis:758

G3J7E5              	100.00%		A3LQG9              	100.00%
Bootstrap support for G3J7E5 as seed ortholog is 100%.
Bootstrap support for A3LQG9 as seed ortholog is 100%.

Group of orthologs #50. Best score 1198 bits
Score difference with first non-orthologous sequence - C.militaris:1198 S.stipitis:1198

G3J2N7              	100.00%		A3LV95              	100.00%
Bootstrap support for G3J2N7 as seed ortholog is 100%.
Bootstrap support for A3LV95 as seed ortholog is 100%.

Group of orthologs #51. Best score 1195 bits
Score difference with first non-orthologous sequence - C.militaris:1007 S.stipitis:1195

G3JLY9              	100.00%		A3LP57              	100.00%
Bootstrap support for G3JLY9 as seed ortholog is 100%.
Bootstrap support for A3LP57 as seed ortholog is 100%.

Group of orthologs #52. Best score 1185 bits
Score difference with first non-orthologous sequence - C.militaris:1185 S.stipitis:1185

G3JEK5              	100.00%		A3LNU8              	100.00%
Bootstrap support for G3JEK5 as seed ortholog is 100%.
Bootstrap support for A3LNU8 as seed ortholog is 100%.

Group of orthologs #53. Best score 1183 bits
Score difference with first non-orthologous sequence - C.militaris:1183 S.stipitis:1183

G3J2L1              	100.00%		A3GH27              	100.00%
Bootstrap support for G3J2L1 as seed ortholog is 100%.
Bootstrap support for A3GH27 as seed ortholog is 100%.

Group of orthologs #54. Best score 1173 bits
Score difference with first non-orthologous sequence - C.militaris:1173 S.stipitis:1173

G3JLH9              	100.00%		A3GHU2              	100.00%
Bootstrap support for G3JLH9 as seed ortholog is 100%.
Bootstrap support for A3GHU2 as seed ortholog is 100%.

Group of orthologs #55. Best score 1164 bits
Score difference with first non-orthologous sequence - C.militaris:1164 S.stipitis:1164

G3JAG4              	100.00%		A3LP17              	100.00%
Bootstrap support for G3JAG4 as seed ortholog is 100%.
Bootstrap support for A3LP17 as seed ortholog is 100%.

Group of orthologs #56. Best score 1161 bits
Score difference with first non-orthologous sequence - C.militaris:1161 S.stipitis:1161

G3JI87              	100.00%		A3LYL7              	100.00%
Bootstrap support for G3JI87 as seed ortholog is 100%.
Bootstrap support for A3LYL7 as seed ortholog is 100%.

Group of orthologs #57. Best score 1150 bits
Score difference with first non-orthologous sequence - C.militaris:1150 S.stipitis:92

G3JMZ1              	100.00%		A3LQ23              	100.00%
Bootstrap support for G3JMZ1 as seed ortholog is 100%.
Bootstrap support for A3LQ23 as seed ortholog is 94%.

Group of orthologs #58. Best score 1141 bits
Score difference with first non-orthologous sequence - C.militaris:1141 S.stipitis:1141

G3JQ74              	100.00%		A3LQ33              	100.00%
Bootstrap support for G3JQ74 as seed ortholog is 100%.
Bootstrap support for A3LQ33 as seed ortholog is 100%.

Group of orthologs #59. Best score 1141 bits
Score difference with first non-orthologous sequence - C.militaris:1141 S.stipitis:1141

G3JL24              	100.00%		A3LYX2              	100.00%
Bootstrap support for G3JL24 as seed ortholog is 100%.
Bootstrap support for A3LYX2 as seed ortholog is 100%.

Group of orthologs #60. Best score 1140 bits
Score difference with first non-orthologous sequence - C.militaris:1140 S.stipitis:1012

G3J3K6              	100.00%		A3LYW7              	100.00%
Bootstrap support for G3J3K6 as seed ortholog is 100%.
Bootstrap support for A3LYW7 as seed ortholog is 100%.

Group of orthologs #61. Best score 1117 bits
Score difference with first non-orthologous sequence - C.militaris:1117 S.stipitis:1117

G3JJY0              	100.00%		A3LRI3              	100.00%
Bootstrap support for G3JJY0 as seed ortholog is 100%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #62. Best score 1110 bits
Score difference with first non-orthologous sequence - C.militaris:1110 S.stipitis:1110

G3J844              	100.00%		A3LY83              	100.00%
Bootstrap support for G3J844 as seed ortholog is 100%.
Bootstrap support for A3LY83 as seed ortholog is 100%.

Group of orthologs #63. Best score 1103 bits
Score difference with first non-orthologous sequence - C.militaris:895 S.stipitis:1103

G3JJ39              	100.00%		A3LU44              	100.00%
Bootstrap support for G3JJ39 as seed ortholog is 100%.
Bootstrap support for A3LU44 as seed ortholog is 100%.

Group of orthologs #64. Best score 1101 bits
Score difference with first non-orthologous sequence - C.militaris:1010 S.stipitis:1101

G3JQP4              	100.00%		A3GGR7              	100.00%
Bootstrap support for G3JQP4 as seed ortholog is 100%.
Bootstrap support for A3GGR7 as seed ortholog is 100%.

Group of orthologs #65. Best score 1091 bits
Score difference with first non-orthologous sequence - C.militaris:1091 S.stipitis:1091

G3J3J3              	100.00%		A3LNZ5              	100.00%
Bootstrap support for G3J3J3 as seed ortholog is 100%.
Bootstrap support for A3LNZ5 as seed ortholog is 100%.

Group of orthologs #66. Best score 1089 bits
Score difference with first non-orthologous sequence - C.militaris:1089 S.stipitis:1089

G3JLM5              	100.00%		A3GHZ1              	100.00%
Bootstrap support for G3JLM5 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 100%.

Group of orthologs #67. Best score 1087 bits
Score difference with first non-orthologous sequence - C.militaris:1087 S.stipitis:42

G3J527              	100.00%		A3LTF0              	100.00%
Bootstrap support for G3J527 as seed ortholog is 100%.
Bootstrap support for A3LTF0 as seed ortholog is 79%.

Group of orthologs #68. Best score 1085 bits
Score difference with first non-orthologous sequence - C.militaris:1085 S.stipitis:1085

G3J9Q2              	100.00%		A3GFX3              	100.00%
Bootstrap support for G3J9Q2 as seed ortholog is 100%.
Bootstrap support for A3GFX3 as seed ortholog is 100%.

Group of orthologs #69. Best score 1085 bits
Score difference with first non-orthologous sequence - C.militaris:1085 S.stipitis:1085

G3JE01              	100.00%		A3LWF3              	100.00%
Bootstrap support for G3JE01 as seed ortholog is 100%.
Bootstrap support for A3LWF3 as seed ortholog is 100%.

Group of orthologs #70. Best score 1080 bits
Score difference with first non-orthologous sequence - C.militaris:1080 S.stipitis:1080

G3J355              	100.00%		A3LTS6              	100.00%
Bootstrap support for G3J355 as seed ortholog is 100%.
Bootstrap support for A3LTS6 as seed ortholog is 100%.

Group of orthologs #71. Best score 1060 bits
Score difference with first non-orthologous sequence - C.militaris:1060 S.stipitis:1060

G3J5P0              	100.00%		A3LYT9              	100.00%
Bootstrap support for G3J5P0 as seed ortholog is 100%.
Bootstrap support for A3LYT9 as seed ortholog is 100%.

Group of orthologs #72. Best score 1060 bits
Score difference with first non-orthologous sequence - C.militaris:775 S.stipitis:1060

G3JAF0              	100.00%		A3LX21              	100.00%
Bootstrap support for G3JAF0 as seed ortholog is 100%.
Bootstrap support for A3LX21 as seed ortholog is 100%.

Group of orthologs #73. Best score 1047 bits
Score difference with first non-orthologous sequence - C.militaris:1047 S.stipitis:1047

G3J5T6              	100.00%		A3M067              	100.00%
Bootstrap support for G3J5T6 as seed ortholog is 100%.
Bootstrap support for A3M067 as seed ortholog is 100%.

Group of orthologs #74. Best score 1037 bits
Score difference with first non-orthologous sequence - C.militaris:1037 S.stipitis:1037

G3JKC9              	100.00%		A3LRN4              	100.00%
Bootstrap support for G3JKC9 as seed ortholog is 100%.
Bootstrap support for A3LRN4 as seed ortholog is 100%.

Group of orthologs #75. Best score 1036 bits
Score difference with first non-orthologous sequence - C.militaris:1036 S.stipitis:1036

G3JBT0              	100.00%		A3LRH5              	100.00%
Bootstrap support for G3JBT0 as seed ortholog is 100%.
Bootstrap support for A3LRH5 as seed ortholog is 100%.

Group of orthologs #76. Best score 1029 bits
Score difference with first non-orthologous sequence - C.militaris:1029 S.stipitis:1029

G3JNX7              	100.00%		A3LPD9              	100.00%
Bootstrap support for G3JNX7 as seed ortholog is 100%.
Bootstrap support for A3LPD9 as seed ortholog is 100%.

Group of orthologs #77. Best score 1026 bits
Score difference with first non-orthologous sequence - C.militaris:1026 S.stipitis:403

G3JEN3              	100.00%		A3GGW0              	100.00%
                    	       		A3LXD9              	25.20%
Bootstrap support for G3JEN3 as seed ortholog is 100%.
Bootstrap support for A3GGW0 as seed ortholog is 100%.

Group of orthologs #78. Best score 1023 bits
Score difference with first non-orthologous sequence - C.militaris:1023 S.stipitis:1023

G3JG20              	100.00%		A3LTH8              	100.00%
Bootstrap support for G3JG20 as seed ortholog is 100%.
Bootstrap support for A3LTH8 as seed ortholog is 100%.

Group of orthologs #79. Best score 1020 bits
Score difference with first non-orthologous sequence - C.militaris:1020 S.stipitis:1020

G3JUB5              	100.00%		A3LVW5              	100.00%
Bootstrap support for G3JUB5 as seed ortholog is 100%.
Bootstrap support for A3LVW5 as seed ortholog is 100%.

Group of orthologs #80. Best score 1018 bits
Score difference with first non-orthologous sequence - C.militaris:1018 S.stipitis:1018

G3JN77              	100.00%		A3GFK3              	100.00%
Bootstrap support for G3JN77 as seed ortholog is 100%.
Bootstrap support for A3GFK3 as seed ortholog is 100%.

Group of orthologs #81. Best score 1003 bits
Score difference with first non-orthologous sequence - C.militaris:872 S.stipitis:1003

G3JD88              	100.00%		A3LTI4              	100.00%
Bootstrap support for G3JD88 as seed ortholog is 100%.
Bootstrap support for A3LTI4 as seed ortholog is 100%.

Group of orthologs #82. Best score 997 bits
Score difference with first non-orthologous sequence - C.militaris:374 S.stipitis:559

G3J2K7              	100.00%		A3LP11              	100.00%
Bootstrap support for G3J2K7 as seed ortholog is 100%.
Bootstrap support for A3LP11 as seed ortholog is 100%.

Group of orthologs #83. Best score 996 bits
Score difference with first non-orthologous sequence - C.militaris:996 S.stipitis:996

G3JG85              	100.00%		A3GH46              	100.00%
Bootstrap support for G3JG85 as seed ortholog is 100%.
Bootstrap support for A3GH46 as seed ortholog is 100%.

Group of orthologs #84. Best score 992 bits
Score difference with first non-orthologous sequence - C.militaris:992 S.stipitis:992

G3J8M7              	100.00%		A3LTJ7              	100.00%
Bootstrap support for G3J8M7 as seed ortholog is 100%.
Bootstrap support for A3LTJ7 as seed ortholog is 100%.

Group of orthologs #85. Best score 991 bits
Score difference with first non-orthologous sequence - C.militaris:882 S.stipitis:991

G3J2X9              	100.00%		A3LTJ2              	100.00%
G3JCW1              	7.37%		
Bootstrap support for G3J2X9 as seed ortholog is 100%.
Bootstrap support for A3LTJ2 as seed ortholog is 100%.

Group of orthologs #86. Best score 990 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:990

G3JA70              	100.00%		A3GFD3              	100.00%
G3JEX7              	12.02%		A3LY53              	37.10%
Bootstrap support for G3JA70 as seed ortholog is 97%.
Bootstrap support for A3GFD3 as seed ortholog is 100%.

Group of orthologs #87. Best score 990 bits
Score difference with first non-orthologous sequence - C.militaris:990 S.stipitis:990

G3JPU0              	100.00%		A3M0P3              	100.00%
Bootstrap support for G3JPU0 as seed ortholog is 100%.
Bootstrap support for A3M0P3 as seed ortholog is 100%.

Group of orthologs #88. Best score 988 bits
Score difference with first non-orthologous sequence - C.militaris:988 S.stipitis:988

G3J7C5              	100.00%		A3LS42              	100.00%
Bootstrap support for G3J7C5 as seed ortholog is 100%.
Bootstrap support for A3LS42 as seed ortholog is 100%.

Group of orthologs #89. Best score 988 bits
Score difference with first non-orthologous sequence - C.militaris:988 S.stipitis:988

G3JKV2              	100.00%		A3M0C1              	100.00%
Bootstrap support for G3JKV2 as seed ortholog is 100%.
Bootstrap support for A3M0C1 as seed ortholog is 100%.

Group of orthologs #90. Best score 986 bits
Score difference with first non-orthologous sequence - C.militaris:986 S.stipitis:986

G3JPR2              	100.00%		A3GHL1              	100.00%
Bootstrap support for G3JPR2 as seed ortholog is 100%.
Bootstrap support for A3GHL1 as seed ortholog is 100%.

Group of orthologs #91. Best score 980 bits
Score difference with first non-orthologous sequence - C.militaris:980 S.stipitis:980

G3JI71              	100.00%		A3LNA3              	100.00%
Bootstrap support for G3JI71 as seed ortholog is 100%.
Bootstrap support for A3LNA3 as seed ortholog is 100%.

Group of orthologs #92. Best score 979 bits
Score difference with first non-orthologous sequence - C.militaris:979 S.stipitis:979

G3J4I8              	100.00%		F5Y6K2              	100.00%
Bootstrap support for G3J4I8 as seed ortholog is 100%.
Bootstrap support for F5Y6K2 as seed ortholog is 100%.

Group of orthologs #93. Best score 979 bits
Score difference with first non-orthologous sequence - C.militaris:979 S.stipitis:979

G3JRL0              	100.00%		A3LZ34              	100.00%
Bootstrap support for G3JRL0 as seed ortholog is 100%.
Bootstrap support for A3LZ34 as seed ortholog is 100%.

Group of orthologs #94. Best score 977 bits
Score difference with first non-orthologous sequence - C.militaris:977 S.stipitis:977

G3JE98              	100.00%		A3LUF6              	100.00%
Bootstrap support for G3JE98 as seed ortholog is 100%.
Bootstrap support for A3LUF6 as seed ortholog is 100%.

Group of orthologs #95. Best score 970 bits
Score difference with first non-orthologous sequence - C.militaris:970 S.stipitis:970

G3JCS6              	100.00%		A3LPM4              	100.00%
Bootstrap support for G3JCS6 as seed ortholog is 100%.
Bootstrap support for A3LPM4 as seed ortholog is 100%.

Group of orthologs #96. Best score 960 bits
Score difference with first non-orthologous sequence - C.militaris:960 S.stipitis:960

G3JEZ4              	100.00%		A3LQC8              	100.00%
Bootstrap support for G3JEZ4 as seed ortholog is 100%.
Bootstrap support for A3LQC8 as seed ortholog is 100%.

Group of orthologs #97. Best score 957 bits
Score difference with first non-orthologous sequence - C.militaris:957 S.stipitis:859

G3J9B6              	100.00%		A3GF06              	100.00%
Bootstrap support for G3J9B6 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 100%.

Group of orthologs #98. Best score 948 bits
Score difference with first non-orthologous sequence - C.militaris:948 S.stipitis:948

G3J6B5              	100.00%		A3GHJ5              	100.00%
Bootstrap support for G3J6B5 as seed ortholog is 100%.
Bootstrap support for A3GHJ5 as seed ortholog is 100%.

Group of orthologs #99. Best score 946 bits
Score difference with first non-orthologous sequence - C.militaris:946 S.stipitis:360

G3JHM3              	100.00%		A3LN25              	100.00%
Bootstrap support for G3JHM3 as seed ortholog is 100%.
Bootstrap support for A3LN25 as seed ortholog is 100%.

Group of orthologs #100. Best score 942 bits
Score difference with first non-orthologous sequence - C.militaris:942 S.stipitis:942

G3JFW3              	100.00%		A3GGW5              	100.00%
Bootstrap support for G3JFW3 as seed ortholog is 100%.
Bootstrap support for A3GGW5 as seed ortholog is 100%.

Group of orthologs #101. Best score 938 bits
Score difference with first non-orthologous sequence - C.militaris:938 S.stipitis:938

G3J7V5              	100.00%		A3M0G2              	100.00%
Bootstrap support for G3J7V5 as seed ortholog is 100%.
Bootstrap support for A3M0G2 as seed ortholog is 100%.

Group of orthologs #102. Best score 936 bits
Score difference with first non-orthologous sequence - C.militaris:936 S.stipitis:936

G3JQ49              	100.00%		A3LV22              	100.00%
Bootstrap support for G3JQ49 as seed ortholog is 100%.
Bootstrap support for A3LV22 as seed ortholog is 100%.

Group of orthologs #103. Best score 935 bits
Score difference with first non-orthologous sequence - C.militaris:935 S.stipitis:761

G3J5W9              	100.00%		A3LY20              	100.00%
Bootstrap support for G3J5W9 as seed ortholog is 100%.
Bootstrap support for A3LY20 as seed ortholog is 100%.

Group of orthologs #104. Best score 934 bits
Score difference with first non-orthologous sequence - C.militaris:389 S.stipitis:336

G3JQN4              	100.00%		A3LU78              	100.00%
                    	       		A3LY16              	51.01%
                    	       		A3LPB4              	27.56%
                    	       		A3LW65              	25.69%
Bootstrap support for G3JQN4 as seed ortholog is 99%.
Bootstrap support for A3LU78 as seed ortholog is 99%.

Group of orthologs #105. Best score 933 bits
Score difference with first non-orthologous sequence - C.militaris:933 S.stipitis:745

G3JIN8              	100.00%		A3GHU7              	100.00%
Bootstrap support for G3JIN8 as seed ortholog is 100%.
Bootstrap support for A3GHU7 as seed ortholog is 100%.

Group of orthologs #106. Best score 923 bits
Score difference with first non-orthologous sequence - C.militaris:923 S.stipitis:923

G3JLN9              	100.00%		A3LUH0              	100.00%
Bootstrap support for G3JLN9 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #107. Best score 922 bits
Score difference with first non-orthologous sequence - C.militaris:922 S.stipitis:922

G3J3Y9              	100.00%		A3LR24              	100.00%
Bootstrap support for G3J3Y9 as seed ortholog is 100%.
Bootstrap support for A3LR24 as seed ortholog is 100%.

Group of orthologs #108. Best score 922 bits
Score difference with first non-orthologous sequence - C.militaris:922 S.stipitis:922

G3JTM9              	100.00%		A3LQ97              	100.00%
Bootstrap support for G3JTM9 as seed ortholog is 100%.
Bootstrap support for A3LQ97 as seed ortholog is 100%.

Group of orthologs #109. Best score 918 bits
Score difference with first non-orthologous sequence - C.militaris:918 S.stipitis:918

G3JTK3              	100.00%		A3GH45              	100.00%
Bootstrap support for G3JTK3 as seed ortholog is 100%.
Bootstrap support for A3GH45 as seed ortholog is 100%.

Group of orthologs #110. Best score 915 bits
Score difference with first non-orthologous sequence - C.militaris:915 S.stipitis:915

G3J3G8              	100.00%		A3LYF4              	100.00%
Bootstrap support for G3J3G8 as seed ortholog is 100%.
Bootstrap support for A3LYF4 as seed ortholog is 100%.

Group of orthologs #111. Best score 913 bits
Score difference with first non-orthologous sequence - C.militaris:913 S.stipitis:913

G3JLD4              	100.00%		A3LSN1              	100.00%
Bootstrap support for G3JLD4 as seed ortholog is 100%.
Bootstrap support for A3LSN1 as seed ortholog is 100%.

Group of orthologs #112. Best score 913 bits
Score difference with first non-orthologous sequence - C.militaris:700 S.stipitis:694

G3JIB5              	100.00%		A3LY04              	100.00%
Bootstrap support for G3JIB5 as seed ortholog is 100%.
Bootstrap support for A3LY04 as seed ortholog is 100%.

Group of orthologs #113. Best score 910 bits
Score difference with first non-orthologous sequence - C.militaris:910 S.stipitis:910

G3JJA3              	100.00%		A3LX99              	100.00%
Bootstrap support for G3JJA3 as seed ortholog is 100%.
Bootstrap support for A3LX99 as seed ortholog is 100%.

Group of orthologs #114. Best score 910 bits
Score difference with first non-orthologous sequence - C.militaris:910 S.stipitis:910

G3JKH4              	100.00%		A3LXK9              	100.00%
Bootstrap support for G3JKH4 as seed ortholog is 100%.
Bootstrap support for A3LXK9 as seed ortholog is 100%.

Group of orthologs #115. Best score 909 bits
Score difference with first non-orthologous sequence - C.militaris:909 S.stipitis:361

G3JJZ4              	100.00%		A3LZ15              	100.00%
Bootstrap support for G3JJZ4 as seed ortholog is 100%.
Bootstrap support for A3LZ15 as seed ortholog is 100%.

Group of orthologs #116. Best score 908 bits
Score difference with first non-orthologous sequence - C.militaris:908 S.stipitis:908

G3JIB2              	100.00%		A3GHT9              	100.00%
Bootstrap support for G3JIB2 as seed ortholog is 100%.
Bootstrap support for A3GHT9 as seed ortholog is 100%.

Group of orthologs #117. Best score 906 bits
Score difference with first non-orthologous sequence - C.militaris:906 S.stipitis:726

G3JDY3              	100.00%		A3GH13              	100.00%
Bootstrap support for G3JDY3 as seed ortholog is 100%.
Bootstrap support for A3GH13 as seed ortholog is 100%.

Group of orthologs #118. Best score 906 bits
Score difference with first non-orthologous sequence - C.militaris:906 S.stipitis:375

G3J3L5              	100.00%		P34736              	100.00%
Bootstrap support for G3J3L5 as seed ortholog is 100%.
Bootstrap support for P34736 as seed ortholog is 100%.

Group of orthologs #119. Best score 903 bits
Score difference with first non-orthologous sequence - C.militaris:903 S.stipitis:903

G3JM00              	100.00%		A3LPZ7              	100.00%
Bootstrap support for G3JM00 as seed ortholog is 100%.
Bootstrap support for A3LPZ7 as seed ortholog is 100%.

Group of orthologs #120. Best score 901 bits
Score difference with first non-orthologous sequence - C.militaris:901 S.stipitis:901

G3JLT7              	100.00%		A3LZY4              	100.00%
Bootstrap support for G3JLT7 as seed ortholog is 100%.
Bootstrap support for A3LZY4 as seed ortholog is 100%.

Group of orthologs #121. Best score 895 bits
Score difference with first non-orthologous sequence - C.militaris:736 S.stipitis:469

G3J3R8              	100.00%		A3GI51              	100.00%
Bootstrap support for G3J3R8 as seed ortholog is 100%.
Bootstrap support for A3GI51 as seed ortholog is 100%.

Group of orthologs #122. Best score 893 bits
Score difference with first non-orthologous sequence - C.militaris:893 S.stipitis:893

G3JG75              	100.00%		A3LPC9              	100.00%
Bootstrap support for G3JG75 as seed ortholog is 100%.
Bootstrap support for A3LPC9 as seed ortholog is 100%.

Group of orthologs #123. Best score 892 bits
Score difference with first non-orthologous sequence - C.militaris:892 S.stipitis:236

G3JJ21              	100.00%		A3LYI6              	100.00%
Bootstrap support for G3JJ21 as seed ortholog is 100%.
Bootstrap support for A3LYI6 as seed ortholog is 100%.

Group of orthologs #124. Best score 889 bits
Score difference with first non-orthologous sequence - C.militaris:889 S.stipitis:889

G3J3M1              	100.00%		A3GGU6              	100.00%
Bootstrap support for G3J3M1 as seed ortholog is 100%.
Bootstrap support for A3GGU6 as seed ortholog is 100%.

Group of orthologs #125. Best score 889 bits
Score difference with first non-orthologous sequence - C.militaris:889 S.stipitis:889

G3JRE1              	100.00%		A3LVA0              	100.00%
Bootstrap support for G3JRE1 as seed ortholog is 100%.
Bootstrap support for A3LVA0 as seed ortholog is 100%.

Group of orthologs #126. Best score 888 bits
Score difference with first non-orthologous sequence - C.militaris:412 S.stipitis:888

G3J4K0              	100.00%		A3GHN8              	100.00%
Bootstrap support for G3J4K0 as seed ortholog is 100%.
Bootstrap support for A3GHN8 as seed ortholog is 100%.

Group of orthologs #127. Best score 888 bits
Score difference with first non-orthologous sequence - C.militaris:888 S.stipitis:888

G3JHM8              	100.00%		A3LN85              	100.00%
Bootstrap support for G3JHM8 as seed ortholog is 100%.
Bootstrap support for A3LN85 as seed ortholog is 100%.

Group of orthologs #128. Best score 887 bits
Score difference with first non-orthologous sequence - C.militaris:887 S.stipitis:316

G3J6K8              	100.00%		A3LXA5              	100.00%
Bootstrap support for G3J6K8 as seed ortholog is 100%.
Bootstrap support for A3LXA5 as seed ortholog is 100%.

Group of orthologs #129. Best score 887 bits
Score difference with first non-orthologous sequence - C.militaris:887 S.stipitis:887

G3JPY3              	100.00%		A3GH63              	100.00%
Bootstrap support for G3JPY3 as seed ortholog is 100%.
Bootstrap support for A3GH63 as seed ortholog is 100%.

Group of orthologs #130. Best score 885 bits
Score difference with first non-orthologous sequence - C.militaris:650 S.stipitis:885

G3J6E7              	100.00%		A3LYG2              	100.00%
Bootstrap support for G3J6E7 as seed ortholog is 100%.
Bootstrap support for A3LYG2 as seed ortholog is 100%.

Group of orthologs #131. Best score 882 bits
Score difference with first non-orthologous sequence - C.militaris:612 S.stipitis:882

G3JKW4              	100.00%		A3LYU3              	100.00%
                    	       		A3LQ66              	30.65%
Bootstrap support for G3JKW4 as seed ortholog is 100%.
Bootstrap support for A3LYU3 as seed ortholog is 100%.

Group of orthologs #132. Best score 882 bits
Score difference with first non-orthologous sequence - C.militaris:882 S.stipitis:882

G3JQ05              	100.00%		A3LYX5              	100.00%
Bootstrap support for G3JQ05 as seed ortholog is 100%.
Bootstrap support for A3LYX5 as seed ortholog is 100%.

Group of orthologs #133. Best score 881 bits
Score difference with first non-orthologous sequence - C.militaris:513 S.stipitis:568

G3J8V6              	100.00%		A3LMW4              	100.00%
Bootstrap support for G3J8V6 as seed ortholog is 100%.
Bootstrap support for A3LMW4 as seed ortholog is 100%.

Group of orthologs #134. Best score 876 bits
Score difference with first non-orthologous sequence - C.militaris:646 S.stipitis:876

G3JDK6              	100.00%		A3GFD8              	100.00%
Bootstrap support for G3JDK6 as seed ortholog is 100%.
Bootstrap support for A3GFD8 as seed ortholog is 100%.

Group of orthologs #135. Best score 872 bits
Score difference with first non-orthologous sequence - C.militaris:872 S.stipitis:872

G3JJH0              	100.00%		A3GHX5              	100.00%
Bootstrap support for G3JJH0 as seed ortholog is 100%.
Bootstrap support for A3GHX5 as seed ortholog is 100%.

Group of orthologs #136. Best score 872 bits
Score difference with first non-orthologous sequence - C.militaris:872 S.stipitis:872

G3JKX0              	100.00%		A3GHV9              	100.00%
Bootstrap support for G3JKX0 as seed ortholog is 100%.
Bootstrap support for A3GHV9 as seed ortholog is 100%.

Group of orthologs #137. Best score 868 bits
Score difference with first non-orthologous sequence - C.militaris:868 S.stipitis:868

G3J4R4              	100.00%		A3LZD2              	100.00%
Bootstrap support for G3J4R4 as seed ortholog is 100%.
Bootstrap support for A3LZD2 as seed ortholog is 100%.

Group of orthologs #138. Best score 866 bits
Score difference with first non-orthologous sequence - C.militaris:866 S.stipitis:866

G3J3J6              	100.00%		A3LPM2              	100.00%
Bootstrap support for G3J3J6 as seed ortholog is 100%.
Bootstrap support for A3LPM2 as seed ortholog is 100%.

Group of orthologs #139. Best score 865 bits
Score difference with first non-orthologous sequence - C.militaris:462 S.stipitis:865

G3JBY5              	100.00%		A3GG31              	100.00%
Bootstrap support for G3JBY5 as seed ortholog is 100%.
Bootstrap support for A3GG31 as seed ortholog is 100%.

Group of orthologs #140. Best score 865 bits
Score difference with first non-orthologous sequence - C.militaris:865 S.stipitis:258

G3JDA1              	100.00%		A3GFA2              	100.00%
Bootstrap support for G3JDA1 as seed ortholog is 100%.
Bootstrap support for A3GFA2 as seed ortholog is 99%.

Group of orthologs #141. Best score 865 bits
Score difference with first non-orthologous sequence - C.militaris:865 S.stipitis:865

G3J9F0              	100.00%		A3LW17              	100.00%
Bootstrap support for G3J9F0 as seed ortholog is 100%.
Bootstrap support for A3LW17 as seed ortholog is 100%.

Group of orthologs #142. Best score 865 bits
Score difference with first non-orthologous sequence - C.militaris:865 S.stipitis:865

G3JNP4              	100.00%		A3GF17              	100.00%
Bootstrap support for G3JNP4 as seed ortholog is 100%.
Bootstrap support for A3GF17 as seed ortholog is 100%.

Group of orthologs #143. Best score 864 bits
Score difference with first non-orthologous sequence - C.militaris:864 S.stipitis:864

G3JU04              	100.00%		A3LTA6              	100.00%
Bootstrap support for G3JU04 as seed ortholog is 100%.
Bootstrap support for A3LTA6 as seed ortholog is 100%.

Group of orthologs #144. Best score 862 bits
Score difference with first non-orthologous sequence - C.militaris:862 S.stipitis:862

G3JLF5              	100.00%		A3LWK8              	100.00%
Bootstrap support for G3JLF5 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 100%.

Group of orthologs #145. Best score 859 bits
Score difference with first non-orthologous sequence - C.militaris:859 S.stipitis:859

G3JKB7              	100.00%		A3LY60              	100.00%
Bootstrap support for G3JKB7 as seed ortholog is 100%.
Bootstrap support for A3LY60 as seed ortholog is 100%.

Group of orthologs #146. Best score 857 bits
Score difference with first non-orthologous sequence - C.militaris:790 S.stipitis:857

G3J578              	100.00%		A3LUG6              	100.00%
Bootstrap support for G3J578 as seed ortholog is 100%.
Bootstrap support for A3LUG6 as seed ortholog is 100%.

Group of orthologs #147. Best score 855 bits
Score difference with first non-orthologous sequence - C.militaris:582 S.stipitis:855

G3JKT9              	100.00%		A3LVI7              	100.00%
                    	       		A3LUN5              	20.89%
                    	       		A3LYK4              	20.65%
                    	       		A3GFD1              	5.04%
Bootstrap support for G3JKT9 as seed ortholog is 100%.
Bootstrap support for A3LVI7 as seed ortholog is 100%.

Group of orthologs #148. Best score 855 bits
Score difference with first non-orthologous sequence - C.militaris:399 S.stipitis:855

G3JJH4              	100.00%		A3M0L3              	100.00%
Bootstrap support for G3JJH4 as seed ortholog is 100%.
Bootstrap support for A3M0L3 as seed ortholog is 100%.

Group of orthologs #149. Best score 854 bits
Score difference with first non-orthologous sequence - C.militaris:528 S.stipitis:5

G3JSC5              	100.00%		A3LXD8              	100.00%
Bootstrap support for G3JSC5 as seed ortholog is 100%.
Bootstrap support for A3LXD8 as seed ortholog is 44%.
Alternative seed ortholog is A3LW76 (5 bits away from this cluster)

Group of orthologs #150. Best score 847 bits
Score difference with first non-orthologous sequence - C.militaris:847 S.stipitis:847

G3JDW8              	100.00%		A3LZF8              	100.00%
Bootstrap support for G3JDW8 as seed ortholog is 100%.
Bootstrap support for A3LZF8 as seed ortholog is 100%.

Group of orthologs #151. Best score 844 bits
Score difference with first non-orthologous sequence - C.militaris:844 S.stipitis:844

G3JMR4              	100.00%		A3LPZ9              	100.00%
Bootstrap support for G3JMR4 as seed ortholog is 100%.
Bootstrap support for A3LPZ9 as seed ortholog is 100%.

Group of orthologs #152. Best score 841 bits
Score difference with first non-orthologous sequence - C.militaris:841 S.stipitis:841

G3JMR9              	100.00%		A3LYU6              	100.00%
Bootstrap support for G3JMR9 as seed ortholog is 100%.
Bootstrap support for A3LYU6 as seed ortholog is 100%.

Group of orthologs #153. Best score 836 bits
Score difference with first non-orthologous sequence - C.militaris:725 S.stipitis:836

G3JN30              	100.00%		A3LNY6              	100.00%
Bootstrap support for G3JN30 as seed ortholog is 100%.
Bootstrap support for A3LNY6 as seed ortholog is 100%.

Group of orthologs #154. Best score 834 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:834

G3JBR7              	100.00%		A3LV99              	100.00%
Bootstrap support for G3JBR7 as seed ortholog is 99%.
Bootstrap support for A3LV99 as seed ortholog is 100%.

Group of orthologs #155. Best score 834 bits
Score difference with first non-orthologous sequence - C.militaris:597 S.stipitis:834

G3JLY8              	100.00%		A3LTX5              	100.00%
Bootstrap support for G3JLY8 as seed ortholog is 100%.
Bootstrap support for A3LTX5 as seed ortholog is 100%.

Group of orthologs #156. Best score 832 bits
Score difference with first non-orthologous sequence - C.militaris:832 S.stipitis:832

G3JHE0              	100.00%		A3LWV7              	100.00%
Bootstrap support for G3JHE0 as seed ortholog is 100%.
Bootstrap support for A3LWV7 as seed ortholog is 100%.

Group of orthologs #157. Best score 832 bits
Score difference with first non-orthologous sequence - C.militaris:832 S.stipitis:832

G3JKY5              	100.00%		A3LWX5              	100.00%
Bootstrap support for G3JKY5 as seed ortholog is 100%.
Bootstrap support for A3LWX5 as seed ortholog is 100%.

Group of orthologs #158. Best score 832 bits
Score difference with first non-orthologous sequence - C.militaris:832 S.stipitis:832

G3JSN4              	100.00%		A3LWG2              	100.00%
Bootstrap support for G3JSN4 as seed ortholog is 100%.
Bootstrap support for A3LWG2 as seed ortholog is 100%.

Group of orthologs #159. Best score 824 bits
Score difference with first non-orthologous sequence - C.militaris:824 S.stipitis:824

G3JCP4              	100.00%		A3LT63              	100.00%
Bootstrap support for G3JCP4 as seed ortholog is 100%.
Bootstrap support for A3LT63 as seed ortholog is 100%.

Group of orthologs #160. Best score 824 bits
Score difference with first non-orthologous sequence - C.militaris:824 S.stipitis:824

G3JPS2              	100.00%		A3LQS2              	100.00%
Bootstrap support for G3JPS2 as seed ortholog is 100%.
Bootstrap support for A3LQS2 as seed ortholog is 100%.

Group of orthologs #161. Best score 823 bits
Score difference with first non-orthologous sequence - C.militaris:823 S.stipitis:823

G3JFV6              	100.00%		A3LXU1              	100.00%
Bootstrap support for G3JFV6 as seed ortholog is 100%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #162. Best score 822 bits
Score difference with first non-orthologous sequence - C.militaris:822 S.stipitis:822

G3JID6              	100.00%		A3LPQ1              	100.00%
Bootstrap support for G3JID6 as seed ortholog is 100%.
Bootstrap support for A3LPQ1 as seed ortholog is 100%.

Group of orthologs #163. Best score 817 bits
Score difference with first non-orthologous sequence - C.militaris:817 S.stipitis:817

G3JF19              	100.00%		A3LN60              	100.00%
Bootstrap support for G3JF19 as seed ortholog is 100%.
Bootstrap support for A3LN60 as seed ortholog is 100%.

Group of orthologs #164. Best score 816 bits
Score difference with first non-orthologous sequence - C.militaris:816 S.stipitis:816

G3JKA1              	100.00%		A3M096              	100.00%
Bootstrap support for G3JKA1 as seed ortholog is 100%.
Bootstrap support for A3M096 as seed ortholog is 100%.

Group of orthologs #165. Best score 814 bits
Score difference with first non-orthologous sequence - C.militaris:515 S.stipitis:814

G3JGQ0              	100.00%		A3LP26              	100.00%
G3JP87              	15.05%		
Bootstrap support for G3JGQ0 as seed ortholog is 100%.
Bootstrap support for A3LP26 as seed ortholog is 100%.

Group of orthologs #166. Best score 814 bits
Score difference with first non-orthologous sequence - C.militaris:814 S.stipitis:814

G3JD41              	100.00%		A3LYZ4              	100.00%
Bootstrap support for G3JD41 as seed ortholog is 100%.
Bootstrap support for A3LYZ4 as seed ortholog is 100%.

Group of orthologs #167. Best score 810 bits
Score difference with first non-orthologous sequence - C.militaris:810 S.stipitis:810

G3JKH6              	100.00%		A3LTZ2              	100.00%
Bootstrap support for G3JKH6 as seed ortholog is 100%.
Bootstrap support for A3LTZ2 as seed ortholog is 100%.

Group of orthologs #168. Best score 808 bits
Score difference with first non-orthologous sequence - C.militaris:541 S.stipitis:527

G3J5Z7              	100.00%		A3LSJ3              	100.00%
Bootstrap support for G3J5Z7 as seed ortholog is 100%.
Bootstrap support for A3LSJ3 as seed ortholog is 100%.

Group of orthologs #169. Best score 800 bits
Score difference with first non-orthologous sequence - C.militaris:800 S.stipitis:800

G3J9H2              	100.00%		A3LNR8              	100.00%
Bootstrap support for G3J9H2 as seed ortholog is 100%.
Bootstrap support for A3LNR8 as seed ortholog is 100%.

Group of orthologs #170. Best score 800 bits
Score difference with first non-orthologous sequence - C.militaris:800 S.stipitis:800

G3JE20              	100.00%		A3LP44              	100.00%
Bootstrap support for G3JE20 as seed ortholog is 100%.
Bootstrap support for A3LP44 as seed ortholog is 100%.

Group of orthologs #171. Best score 799 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:799

G3JAU4              	100.00%		A3GFY3              	100.00%
Bootstrap support for G3JAU4 as seed ortholog is 95%.
Bootstrap support for A3GFY3 as seed ortholog is 100%.

Group of orthologs #172. Best score 799 bits
Score difference with first non-orthologous sequence - C.militaris:799 S.stipitis:799

G3J8G8              	100.00%		A3LQB6              	100.00%
Bootstrap support for G3J8G8 as seed ortholog is 100%.
Bootstrap support for A3LQB6 as seed ortholog is 100%.

Group of orthologs #173. Best score 798 bits
Score difference with first non-orthologous sequence - C.militaris:561 S.stipitis:508

G3J4H5              	100.00%		A3LR58              	100.00%
                    	       		A3LWS3              	35.05%
Bootstrap support for G3J4H5 as seed ortholog is 100%.
Bootstrap support for A3LR58 as seed ortholog is 100%.

Group of orthologs #174. Best score 797 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:797

G3J976              	100.00%		A3LZ49              	100.00%
G3JKN4              	7.41%		A3LZ50              	90.00%
Bootstrap support for G3J976 as seed ortholog is 96%.
Bootstrap support for A3LZ49 as seed ortholog is 100%.

Group of orthologs #175. Best score 796 bits
Score difference with first non-orthologous sequence - C.militaris:796 S.stipitis:796

G3J3V4              	100.00%		A3LRW3              	100.00%
Bootstrap support for G3J3V4 as seed ortholog is 100%.
Bootstrap support for A3LRW3 as seed ortholog is 100%.

Group of orthologs #176. Best score 794 bits
Score difference with first non-orthologous sequence - C.militaris:794 S.stipitis:794

G3JTQ3              	100.00%		A3LNN0              	100.00%
Bootstrap support for G3JTQ3 as seed ortholog is 100%.
Bootstrap support for A3LNN0 as seed ortholog is 100%.

Group of orthologs #177. Best score 793 bits
Score difference with first non-orthologous sequence - C.militaris:793 S.stipitis:793

G3J8Z3              	100.00%		A3GF51              	100.00%
Bootstrap support for G3J8Z3 as seed ortholog is 100%.
Bootstrap support for A3GF51 as seed ortholog is 100%.

Group of orthologs #178. Best score 791 bits
Score difference with first non-orthologous sequence - C.militaris:791 S.stipitis:791

G3JKF3              	100.00%		A3LTI7              	100.00%
Bootstrap support for G3JKF3 as seed ortholog is 100%.
Bootstrap support for A3LTI7 as seed ortholog is 100%.

Group of orthologs #179. Best score 790 bits
Score difference with first non-orthologous sequence - C.militaris:790 S.stipitis:790

G3JG01              	100.00%		A3LX63              	100.00%
Bootstrap support for G3JG01 as seed ortholog is 100%.
Bootstrap support for A3LX63 as seed ortholog is 100%.

Group of orthologs #180. Best score 789 bits
Score difference with first non-orthologous sequence - C.militaris:789 S.stipitis:789

G3JD78              	100.00%		A3LXQ0              	100.00%
Bootstrap support for G3JD78 as seed ortholog is 100%.
Bootstrap support for A3LXQ0 as seed ortholog is 100%.

Group of orthologs #181. Best score 785 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:785

G3J471              	100.00%		A3LSA7              	100.00%
Bootstrap support for G3J471 as seed ortholog is 99%.
Bootstrap support for A3LSA7 as seed ortholog is 100%.

Group of orthologs #182. Best score 785 bits
Score difference with first non-orthologous sequence - C.militaris:785 S.stipitis:785

G3J7F8              	100.00%		A3LP29              	100.00%
Bootstrap support for G3J7F8 as seed ortholog is 100%.
Bootstrap support for A3LP29 as seed ortholog is 100%.

Group of orthologs #183. Best score 783 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:783

G3JG68              	100.00%		A3LQP2              	100.00%
Bootstrap support for G3JG68 as seed ortholog is 99%.
Bootstrap support for A3LQP2 as seed ortholog is 100%.

Group of orthologs #184. Best score 781 bits
Score difference with first non-orthologous sequence - C.militaris:643 S.stipitis:667

G3JI77              	100.00%		A3LY21              	100.00%
Bootstrap support for G3JI77 as seed ortholog is 100%.
Bootstrap support for A3LY21 as seed ortholog is 100%.

Group of orthologs #185. Best score 779 bits
Score difference with first non-orthologous sequence - C.militaris:671 S.stipitis:779

G3JJ70              	100.00%		A3GGR8              	100.00%
Bootstrap support for G3JJ70 as seed ortholog is 100%.
Bootstrap support for A3GGR8 as seed ortholog is 100%.

Group of orthologs #186. Best score 778 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:778

G3JAZ9              	100.00%		A3LZ46              	100.00%
G3JMY4              	39.35%		A3LSF6              	60.70%
                    	       		A3LZ43              	57.74%
                    	       		A3LQX3              	38.65%
                    	       		A3GGC7              	11.31%
Bootstrap support for G3JAZ9 as seed ortholog is 96%.
Bootstrap support for A3LZ46 as seed ortholog is 100%.

Group of orthologs #187. Best score 777 bits
Score difference with first non-orthologous sequence - C.militaris:634 S.stipitis:777

G3JLY4              	100.00%		A3LZG4              	100.00%
Bootstrap support for G3JLY4 as seed ortholog is 100%.
Bootstrap support for A3LZG4 as seed ortholog is 100%.

Group of orthologs #188. Best score 776 bits
Score difference with first non-orthologous sequence - C.militaris:776 S.stipitis:776

G3J6W4              	100.00%		A3LQE3              	100.00%
Bootstrap support for G3J6W4 as seed ortholog is 100%.
Bootstrap support for A3LQE3 as seed ortholog is 100%.

Group of orthologs #189. Best score 776 bits
Score difference with first non-orthologous sequence - C.militaris:776 S.stipitis:776

G3JHM0              	100.00%		A3LYE9              	100.00%
Bootstrap support for G3JHM0 as seed ortholog is 100%.
Bootstrap support for A3LYE9 as seed ortholog is 100%.

Group of orthologs #190. Best score 775 bits
Score difference with first non-orthologous sequence - C.militaris:703 S.stipitis:775

G3J650              	100.00%		A3LQC6              	100.00%
Bootstrap support for G3J650 as seed ortholog is 100%.
Bootstrap support for A3LQC6 as seed ortholog is 100%.

Group of orthologs #191. Best score 772 bits
Score difference with first non-orthologous sequence - C.militaris:772 S.stipitis:772

G3JQK1              	100.00%		A3LQ53              	100.00%
Bootstrap support for G3JQK1 as seed ortholog is 100%.
Bootstrap support for A3LQ53 as seed ortholog is 100%.

Group of orthologs #192. Best score 765 bits
Score difference with first non-orthologous sequence - C.militaris:765 S.stipitis:199

G3JSL1              	100.00%		A3LQ72              	100.00%
Bootstrap support for G3JSL1 as seed ortholog is 100%.
Bootstrap support for A3LQ72 as seed ortholog is 99%.

Group of orthologs #193. Best score 764 bits
Score difference with first non-orthologous sequence - C.militaris:764 S.stipitis:764

G3J962              	100.00%		A3LPR5              	100.00%
Bootstrap support for G3J962 as seed ortholog is 100%.
Bootstrap support for A3LPR5 as seed ortholog is 100%.

Group of orthologs #194. Best score 763 bits
Score difference with first non-orthologous sequence - C.militaris:763 S.stipitis:763

G3JF42              	100.00%		A3LS00              	100.00%
Bootstrap support for G3JF42 as seed ortholog is 100%.
Bootstrap support for A3LS00 as seed ortholog is 100%.

Group of orthologs #195. Best score 763 bits
Score difference with first non-orthologous sequence - C.militaris:763 S.stipitis:763

G3JMA0              	100.00%		A3LNU0              	100.00%
Bootstrap support for G3JMA0 as seed ortholog is 100%.
Bootstrap support for A3LNU0 as seed ortholog is 100%.

Group of orthologs #196. Best score 761 bits
Score difference with first non-orthologous sequence - C.militaris:202 S.stipitis:761

G3JRB7              	100.00%		A3LTP9              	100.00%
                    	       		A3GGS0              	37.24%
                    	       		A3LP35              	8.28%
Bootstrap support for G3JRB7 as seed ortholog is 99%.
Bootstrap support for A3LTP9 as seed ortholog is 100%.

Group of orthologs #197. Best score 759 bits
Score difference with first non-orthologous sequence - C.militaris:410 S.stipitis:601

G3J935              	100.00%		A3LQ01              	100.00%
Bootstrap support for G3J935 as seed ortholog is 100%.
Bootstrap support for A3LQ01 as seed ortholog is 100%.

Group of orthologs #198. Best score 755 bits
Score difference with first non-orthologous sequence - C.militaris:755 S.stipitis:755

G3J5M1              	100.00%		A3GF58              	100.00%
Bootstrap support for G3J5M1 as seed ortholog is 100%.
Bootstrap support for A3GF58 as seed ortholog is 100%.

Group of orthologs #199. Best score 755 bits
Score difference with first non-orthologous sequence - C.militaris:755 S.stipitis:755

G3JJT4              	100.00%		A3LTK8              	100.00%
Bootstrap support for G3JJT4 as seed ortholog is 100%.
Bootstrap support for A3LTK8 as seed ortholog is 100%.

Group of orthologs #200. Best score 753 bits
Score difference with first non-orthologous sequence - C.militaris:753 S.stipitis:753

G3JEF2              	100.00%		A3LPZ4              	100.00%
Bootstrap support for G3JEF2 as seed ortholog is 100%.
Bootstrap support for A3LPZ4 as seed ortholog is 100%.

Group of orthologs #201. Best score 750 bits
Score difference with first non-orthologous sequence - C.militaris:750 S.stipitis:750

G3J4C2              	100.00%		A3LZ90              	100.00%
Bootstrap support for G3J4C2 as seed ortholog is 100%.
Bootstrap support for A3LZ90 as seed ortholog is 100%.

Group of orthologs #202. Best score 750 bits
Score difference with first non-orthologous sequence - C.militaris:750 S.stipitis:750

G3JQW4              	100.00%		A3LU88              	100.00%
Bootstrap support for G3JQW4 as seed ortholog is 100%.
Bootstrap support for A3LU88 as seed ortholog is 100%.

Group of orthologs #203. Best score 749 bits
Score difference with first non-orthologous sequence - C.militaris:749 S.stipitis:749

G3JD79              	100.00%		A3GGI6              	100.00%
Bootstrap support for G3JD79 as seed ortholog is 100%.
Bootstrap support for A3GGI6 as seed ortholog is 100%.

Group of orthologs #204. Best score 749 bits
Score difference with first non-orthologous sequence - C.militaris:749 S.stipitis:749

G3JEL2              	100.00%		A3GF60              	100.00%
Bootstrap support for G3JEL2 as seed ortholog is 100%.
Bootstrap support for A3GF60 as seed ortholog is 100%.

Group of orthologs #205. Best score 749 bits
Score difference with first non-orthologous sequence - C.militaris:749 S.stipitis:749

G3JAA7              	100.00%		A3M072              	100.00%
Bootstrap support for G3JAA7 as seed ortholog is 100%.
Bootstrap support for A3M072 as seed ortholog is 100%.

Group of orthologs #206. Best score 746 bits
Score difference with first non-orthologous sequence - C.militaris:425 S.stipitis:746

G3JDB2              	100.00%		A3M0D4              	100.00%
Bootstrap support for G3JDB2 as seed ortholog is 100%.
Bootstrap support for A3M0D4 as seed ortholog is 100%.

Group of orthologs #207. Best score 745 bits
Score difference with first non-orthologous sequence - C.militaris:630 S.stipitis:621

G3JPS3              	100.00%		A3LST8              	100.00%
Bootstrap support for G3JPS3 as seed ortholog is 100%.
Bootstrap support for A3LST8 as seed ortholog is 100%.

Group of orthologs #208. Best score 744 bits
Score difference with first non-orthologous sequence - C.militaris:744 S.stipitis:678

G3J8S2              	100.00%		A3LQX4              	100.00%
Bootstrap support for G3J8S2 as seed ortholog is 100%.
Bootstrap support for A3LQX4 as seed ortholog is 100%.

Group of orthologs #209. Best score 742 bits
Score difference with first non-orthologous sequence - C.militaris:742 S.stipitis:742

G3JGV7              	100.00%		A3LN51              	100.00%
Bootstrap support for G3JGV7 as seed ortholog is 100%.
Bootstrap support for A3LN51 as seed ortholog is 100%.

Group of orthologs #210. Best score 740 bits
Score difference with first non-orthologous sequence - C.militaris:740 S.stipitis:419

G3JTP8              	100.00%		A3LW31              	100.00%
Bootstrap support for G3JTP8 as seed ortholog is 100%.
Bootstrap support for A3LW31 as seed ortholog is 100%.

Group of orthologs #211. Best score 738 bits
Score difference with first non-orthologous sequence - C.militaris:738 S.stipitis:738

G3JU02              	100.00%		A3LXX9              	100.00%
Bootstrap support for G3JU02 as seed ortholog is 100%.
Bootstrap support for A3LXX9 as seed ortholog is 100%.

Group of orthologs #212. Best score 737 bits
Score difference with first non-orthologous sequence - C.militaris:737 S.stipitis:737

G3J5U5              	100.00%		A3LXF0              	100.00%
Bootstrap support for G3J5U5 as seed ortholog is 100%.
Bootstrap support for A3LXF0 as seed ortholog is 100%.

Group of orthologs #213. Best score 737 bits
Score difference with first non-orthologous sequence - C.militaris:641 S.stipitis:737

G3JKA8              	100.00%		A3GH29              	100.00%
Bootstrap support for G3JKA8 as seed ortholog is 100%.
Bootstrap support for A3GH29 as seed ortholog is 100%.

Group of orthologs #214. Best score 735 bits
Score difference with first non-orthologous sequence - C.militaris:367 S.stipitis:573

G3JDK7              	100.00%		A3LX42              	100.00%
G3JMJ3              	45.81%		
Bootstrap support for G3JDK7 as seed ortholog is 100%.
Bootstrap support for A3LX42 as seed ortholog is 100%.

Group of orthologs #215. Best score 735 bits
Score difference with first non-orthologous sequence - C.militaris:735 S.stipitis:735

G3JCQ8              	100.00%		A3LYT5              	100.00%
Bootstrap support for G3JCQ8 as seed ortholog is 100%.
Bootstrap support for A3LYT5 as seed ortholog is 100%.

Group of orthologs #216. Best score 733 bits
Score difference with first non-orthologous sequence - C.militaris:481 S.stipitis:733

G3JKK3              	100.00%		A3LQ67              	100.00%
Bootstrap support for G3JKK3 as seed ortholog is 100%.
Bootstrap support for A3LQ67 as seed ortholog is 100%.

Group of orthologs #217. Best score 731 bits
Score difference with first non-orthologous sequence - C.militaris:731 S.stipitis:731

G3J8D0              	100.00%		A3GIB9              	100.00%
Bootstrap support for G3J8D0 as seed ortholog is 100%.
Bootstrap support for A3GIB9 as seed ortholog is 100%.

Group of orthologs #218. Best score 730 bits
Score difference with first non-orthologous sequence - C.militaris:730 S.stipitis:730

G3J955              	100.00%		A3LMU7              	100.00%
Bootstrap support for G3J955 as seed ortholog is 100%.
Bootstrap support for A3LMU7 as seed ortholog is 100%.

Group of orthologs #219. Best score 730 bits
Score difference with first non-orthologous sequence - C.militaris:730 S.stipitis:730

G3JJA1              	100.00%		A3GFY8              	100.00%
Bootstrap support for G3JJA1 as seed ortholog is 100%.
Bootstrap support for A3GFY8 as seed ortholog is 100%.

Group of orthologs #220. Best score 730 bits
Score difference with first non-orthologous sequence - C.militaris:730 S.stipitis:730

G3JL79              	100.00%		A3GI40              	100.00%
Bootstrap support for G3JL79 as seed ortholog is 100%.
Bootstrap support for A3GI40 as seed ortholog is 100%.

Group of orthologs #221. Best score 730 bits
Score difference with first non-orthologous sequence - C.militaris:730 S.stipitis:416

G3JEP1              	100.00%		A3LX56              	100.00%
Bootstrap support for G3JEP1 as seed ortholog is 100%.
Bootstrap support for A3LX56 as seed ortholog is 100%.

Group of orthologs #222. Best score 729 bits
Score difference with first non-orthologous sequence - C.militaris:351 S.stipitis:524

G3JI14              	100.00%		A3LRL2              	100.00%
Bootstrap support for G3JI14 as seed ortholog is 100%.
Bootstrap support for A3LRL2 as seed ortholog is 100%.

Group of orthologs #223. Best score 727 bits
Score difference with first non-orthologous sequence - C.militaris:727 S.stipitis:727

G3JL39              	100.00%		A3LTV5              	100.00%
Bootstrap support for G3JL39 as seed ortholog is 100%.
Bootstrap support for A3LTV5 as seed ortholog is 100%.

Group of orthologs #224. Best score 722 bits
Score difference with first non-orthologous sequence - C.militaris:378 S.stipitis:722

G3J3I2              	100.00%		A3LXL1              	100.00%
Bootstrap support for G3J3I2 as seed ortholog is 100%.
Bootstrap support for A3LXL1 as seed ortholog is 100%.

Group of orthologs #225. Best score 721 bits
Score difference with first non-orthologous sequence - C.militaris:552 S.stipitis:721

G3J4I5              	100.00%		A3LTZ7              	100.00%
Bootstrap support for G3J4I5 as seed ortholog is 100%.
Bootstrap support for A3LTZ7 as seed ortholog is 100%.

Group of orthologs #226. Best score 720 bits
Score difference with first non-orthologous sequence - C.militaris:720 S.stipitis:720

G3J3M4              	100.00%		A3LU95              	100.00%
Bootstrap support for G3J3M4 as seed ortholog is 100%.
Bootstrap support for A3LU95 as seed ortholog is 100%.

Group of orthologs #227. Best score 718 bits
Score difference with first non-orthologous sequence - C.militaris:522 S.stipitis:718

G3J7P0              	100.00%		A3GIC6              	100.00%
Bootstrap support for G3J7P0 as seed ortholog is 100%.
Bootstrap support for A3GIC6 as seed ortholog is 100%.

Group of orthologs #228. Best score 718 bits
Score difference with first non-orthologous sequence - C.militaris:718 S.stipitis:718

G3J934              	100.00%		A3LUX2              	100.00%
Bootstrap support for G3J934 as seed ortholog is 100%.
Bootstrap support for A3LUX2 as seed ortholog is 100%.

Group of orthologs #229. Best score 717 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:717

G3JGT0              	100.00%		A3LPQ6              	100.00%
Bootstrap support for G3JGT0 as seed ortholog is 87%.
Bootstrap support for A3LPQ6 as seed ortholog is 100%.

Group of orthologs #230. Best score 717 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:717

G3JKA9              	100.00%		A3LXB5              	100.00%
Bootstrap support for G3JKA9 as seed ortholog is 100%.
Bootstrap support for A3LXB5 as seed ortholog is 100%.

Group of orthologs #231. Best score 716 bits
Score difference with first non-orthologous sequence - C.militaris:716 S.stipitis:716

G3JJF6              	100.00%		A3GGF2              	100.00%
Bootstrap support for G3JJF6 as seed ortholog is 100%.
Bootstrap support for A3GGF2 as seed ortholog is 100%.

Group of orthologs #232. Best score 713 bits
Score difference with first non-orthologous sequence - C.militaris:454 S.stipitis:533

G3JUA9              	100.00%		A3LQW7              	100.00%
Bootstrap support for G3JUA9 as seed ortholog is 100%.
Bootstrap support for A3LQW7 as seed ortholog is 100%.

Group of orthologs #233. Best score 712 bits
Score difference with first non-orthologous sequence - C.militaris:712 S.stipitis:712

G3J7J1              	100.00%		A3LNS7              	100.00%
Bootstrap support for G3J7J1 as seed ortholog is 100%.
Bootstrap support for A3LNS7 as seed ortholog is 100%.

Group of orthologs #234. Best score 711 bits
Score difference with first non-orthologous sequence - C.militaris:551 S.stipitis:513

G3JQ83              	100.00%		A3GGE9              	100.00%
Bootstrap support for G3JQ83 as seed ortholog is 100%.
Bootstrap support for A3GGE9 as seed ortholog is 100%.

Group of orthologs #235. Best score 710 bits
Score difference with first non-orthologous sequence - C.militaris:710 S.stipitis:710

G3JKM5              	100.00%		A3LRH3              	100.00%
Bootstrap support for G3JKM5 as seed ortholog is 100%.
Bootstrap support for A3LRH3 as seed ortholog is 100%.

Group of orthologs #236. Best score 707 bits
Score difference with first non-orthologous sequence - C.militaris:707 S.stipitis:707

G3JHX4              	100.00%		A3LVR7              	100.00%
Bootstrap support for G3JHX4 as seed ortholog is 100%.
Bootstrap support for A3LVR7 as seed ortholog is 100%.

Group of orthologs #237. Best score 704 bits
Score difference with first non-orthologous sequence - C.militaris:248 S.stipitis:444

G3JD34              	100.00%		A3GHK6              	100.00%
Bootstrap support for G3JD34 as seed ortholog is 100%.
Bootstrap support for A3GHK6 as seed ortholog is 100%.

Group of orthologs #238. Best score 704 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:558

G3JI79              	100.00%		A3LTP2              	100.00%
Bootstrap support for G3JI79 as seed ortholog is 99%.
Bootstrap support for A3LTP2 as seed ortholog is 100%.

Group of orthologs #239. Best score 704 bits
Score difference with first non-orthologous sequence - C.militaris:646 S.stipitis:415

G3JQX9              	100.00%		A3GI52              	100.00%
Bootstrap support for G3JQX9 as seed ortholog is 100%.
Bootstrap support for A3GI52 as seed ortholog is 100%.

Group of orthologs #240. Best score 702 bits
Score difference with first non-orthologous sequence - C.militaris:702 S.stipitis:702

G3J8I1              	100.00%		A3LZT3              	100.00%
Bootstrap support for G3J8I1 as seed ortholog is 100%.
Bootstrap support for A3LZT3 as seed ortholog is 100%.

Group of orthologs #241. Best score 700 bits
Score difference with first non-orthologous sequence - C.militaris:141 S.stipitis:107

G3J4E2              	100.00%		A3LRJ3              	100.00%
Bootstrap support for G3J4E2 as seed ortholog is 99%.
Bootstrap support for A3LRJ3 as seed ortholog is 99%.

Group of orthologs #242. Best score 700 bits
Score difference with first non-orthologous sequence - C.militaris:700 S.stipitis:527

G3JQN7              	100.00%		A3LS85              	100.00%
Bootstrap support for G3JQN7 as seed ortholog is 100%.
Bootstrap support for A3LS85 as seed ortholog is 100%.

Group of orthologs #243. Best score 694 bits
Score difference with first non-orthologous sequence - C.militaris:694 S.stipitis:580

G3JGJ7              	100.00%		A3GI55              	100.00%
G3JJB9              	43.33%		
Bootstrap support for G3JGJ7 as seed ortholog is 100%.
Bootstrap support for A3GI55 as seed ortholog is 100%.

Group of orthologs #244. Best score 693 bits
Score difference with first non-orthologous sequence - C.militaris:424 S.stipitis:526

G3JP45              	100.00%		A3LX20              	100.00%
Bootstrap support for G3JP45 as seed ortholog is 100%.
Bootstrap support for A3LX20 as seed ortholog is 100%.

Group of orthologs #245. Best score 690 bits
Score difference with first non-orthologous sequence - C.militaris:483 S.stipitis:690

G3JQH2              	100.00%		A3LX73              	100.00%
G3JE86              	26.23%		
Bootstrap support for G3JQH2 as seed ortholog is 100%.
Bootstrap support for A3LX73 as seed ortholog is 100%.

Group of orthologs #246. Best score 690 bits
Score difference with first non-orthologous sequence - C.militaris:690 S.stipitis:690

G3JKE0              	100.00%		A3LVE2              	100.00%
Bootstrap support for G3JKE0 as seed ortholog is 100%.
Bootstrap support for A3LVE2 as seed ortholog is 100%.

Group of orthologs #247. Best score 688 bits
Score difference with first non-orthologous sequence - C.militaris:688 S.stipitis:688

G3J8Q7              	100.00%		A3LY35              	100.00%
Bootstrap support for G3J8Q7 as seed ortholog is 100%.
Bootstrap support for A3LY35 as seed ortholog is 100%.

Group of orthologs #248. Best score 685 bits
Score difference with first non-orthologous sequence - C.militaris:685 S.stipitis:121

G3JLG2              	100.00%		A3LSB9              	100.00%
Bootstrap support for G3JLG2 as seed ortholog is 100%.
Bootstrap support for A3LSB9 as seed ortholog is 93%.

Group of orthologs #249. Best score 682 bits
Score difference with first non-orthologous sequence - C.militaris:682 S.stipitis:66

G3JAG9              	100.00%		A3GF94              	100.00%
Bootstrap support for G3JAG9 as seed ortholog is 100%.
Bootstrap support for A3GF94 as seed ortholog is 84%.

Group of orthologs #250. Best score 680 bits
Score difference with first non-orthologous sequence - C.militaris:680 S.stipitis:680

G3J398              	100.00%		A3LQJ7              	100.00%
Bootstrap support for G3J398 as seed ortholog is 100%.
Bootstrap support for A3LQJ7 as seed ortholog is 100%.

Group of orthologs #251. Best score 680 bits
Score difference with first non-orthologous sequence - C.militaris:680 S.stipitis:680

G3JJM7              	100.00%		A3LSS5              	100.00%
Bootstrap support for G3JJM7 as seed ortholog is 100%.
Bootstrap support for A3LSS5 as seed ortholog is 100%.

Group of orthologs #252. Best score 680 bits
Score difference with first non-orthologous sequence - C.militaris:358 S.stipitis:417

G3JK92              	100.00%		A3LVL5              	100.00%
Bootstrap support for G3JK92 as seed ortholog is 100%.
Bootstrap support for A3LVL5 as seed ortholog is 100%.

Group of orthologs #253. Best score 680 bits
Score difference with first non-orthologous sequence - C.militaris:680 S.stipitis:680

G3JN97              	100.00%		A3LUI1              	100.00%
Bootstrap support for G3JN97 as seed ortholog is 100%.
Bootstrap support for A3LUI1 as seed ortholog is 100%.

Group of orthologs #254. Best score 679 bits
Score difference with first non-orthologous sequence - C.militaris:679 S.stipitis:679

G3JFF0              	100.00%		A3LTZ0              	100.00%
Bootstrap support for G3JFF0 as seed ortholog is 100%.
Bootstrap support for A3LTZ0 as seed ortholog is 100%.

Group of orthologs #255. Best score 678 bits
Score difference with first non-orthologous sequence - C.militaris:678 S.stipitis:254

G3JAN4              	100.00%		A3GG30              	100.00%
Bootstrap support for G3JAN4 as seed ortholog is 100%.
Bootstrap support for A3GG30 as seed ortholog is 100%.

Group of orthologs #256. Best score 677 bits
Score difference with first non-orthologous sequence - C.militaris:677 S.stipitis:677

G3J3H3              	100.00%		A3LR18              	100.00%
Bootstrap support for G3J3H3 as seed ortholog is 100%.
Bootstrap support for A3LR18 as seed ortholog is 100%.

Group of orthologs #257. Best score 677 bits
Score difference with first non-orthologous sequence - C.militaris:443 S.stipitis:677

G3J7T8              	100.00%		A3LPC1              	100.00%
Bootstrap support for G3J7T8 as seed ortholog is 100%.
Bootstrap support for A3LPC1 as seed ortholog is 100%.

Group of orthologs #258. Best score 675 bits
Score difference with first non-orthologous sequence - C.militaris:675 S.stipitis:675

G3J6C9              	100.00%		A3GEX5              	100.00%
Bootstrap support for G3J6C9 as seed ortholog is 100%.
Bootstrap support for A3GEX5 as seed ortholog is 100%.

Group of orthologs #259. Best score 675 bits
Score difference with first non-orthologous sequence - C.militaris:675 S.stipitis:675

G3J3J4              	100.00%		A3LUC6              	100.00%
Bootstrap support for G3J3J4 as seed ortholog is 100%.
Bootstrap support for A3LUC6 as seed ortholog is 100%.

Group of orthologs #260. Best score 675 bits
Score difference with first non-orthologous sequence - C.militaris:471 S.stipitis:484

G3JUT3              	100.00%		A3LNR6              	100.00%
Bootstrap support for G3JUT3 as seed ortholog is 100%.
Bootstrap support for A3LNR6 as seed ortholog is 100%.

Group of orthologs #261. Best score 673 bits
Score difference with first non-orthologous sequence - C.militaris:673 S.stipitis:673

G3J627              	100.00%		A3GG22              	100.00%
Bootstrap support for G3J627 as seed ortholog is 100%.
Bootstrap support for A3GG22 as seed ortholog is 100%.

Group of orthologs #262. Best score 673 bits
Score difference with first non-orthologous sequence - C.militaris:673 S.stipitis:673

G3J3N0              	100.00%		A3LXR1              	100.00%
Bootstrap support for G3J3N0 as seed ortholog is 100%.
Bootstrap support for A3LXR1 as seed ortholog is 100%.

Group of orthologs #263. Best score 673 bits
Score difference with first non-orthologous sequence - C.militaris:673 S.stipitis:673

G3JBK5              	100.00%		A3LZJ2              	100.00%
Bootstrap support for G3JBK5 as seed ortholog is 100%.
Bootstrap support for A3LZJ2 as seed ortholog is 100%.

Group of orthologs #264. Best score 672 bits
Score difference with first non-orthologous sequence - C.militaris:672 S.stipitis:672

G3JLY6              	100.00%		A3LNG1              	100.00%
Bootstrap support for G3JLY6 as seed ortholog is 100%.
Bootstrap support for A3LNG1 as seed ortholog is 100%.

Group of orthologs #265. Best score 671 bits
Score difference with first non-orthologous sequence - C.militaris:671 S.stipitis:453

G3JB30              	100.00%		A3LRI0              	100.00%
Bootstrap support for G3JB30 as seed ortholog is 100%.
Bootstrap support for A3LRI0 as seed ortholog is 100%.

Group of orthologs #266. Best score 670 bits
Score difference with first non-orthologous sequence - C.militaris:670 S.stipitis:670

G3J388              	100.00%		A3LSE9              	100.00%
Bootstrap support for G3J388 as seed ortholog is 100%.
Bootstrap support for A3LSE9 as seed ortholog is 100%.

Group of orthologs #267. Best score 670 bits
Score difference with first non-orthologous sequence - C.militaris:670 S.stipitis:670

G3JJI7              	100.00%		A3LP67              	100.00%
Bootstrap support for G3JJI7 as seed ortholog is 100%.
Bootstrap support for A3LP67 as seed ortholog is 100%.

Group of orthologs #268. Best score 670 bits
Score difference with first non-orthologous sequence - C.militaris:670 S.stipitis:670

G3JQW2              	100.00%		A3LX91              	100.00%
Bootstrap support for G3JQW2 as seed ortholog is 100%.
Bootstrap support for A3LX91 as seed ortholog is 100%.

Group of orthologs #269. Best score 666 bits
Score difference with first non-orthologous sequence - C.militaris:666 S.stipitis:666

G3JPQ0              	100.00%		A3LV88              	100.00%
Bootstrap support for G3JPQ0 as seed ortholog is 100%.
Bootstrap support for A3LV88 as seed ortholog is 100%.

Group of orthologs #270. Best score 665 bits
Score difference with first non-orthologous sequence - C.militaris:488 S.stipitis:416

G3J973              	100.00%		A3LST5              	100.00%
Bootstrap support for G3J973 as seed ortholog is 100%.
Bootstrap support for A3LST5 as seed ortholog is 100%.

Group of orthologs #271. Best score 665 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:665

G3JID4              	100.00%		A3GF19              	100.00%
Bootstrap support for G3JID4 as seed ortholog is 99%.
Bootstrap support for A3GF19 as seed ortholog is 100%.

Group of orthologs #272. Best score 665 bits
Score difference with first non-orthologous sequence - C.militaris:665 S.stipitis:383

G3JUU8              	100.00%		A3GEU5              	100.00%
Bootstrap support for G3JUU8 as seed ortholog is 100%.
Bootstrap support for A3GEU5 as seed ortholog is 100%.

Group of orthologs #273. Best score 664 bits
Score difference with first non-orthologous sequence - C.militaris:425 S.stipitis:415

G3JFD8              	100.00%		A3LRS8              	100.00%
Bootstrap support for G3JFD8 as seed ortholog is 100%.
Bootstrap support for A3LRS8 as seed ortholog is 100%.

Group of orthologs #274. Best score 663 bits
Score difference with first non-orthologous sequence - C.militaris:663 S.stipitis:495

G3J4G5              	100.00%		A3LZN1              	100.00%
Bootstrap support for G3J4G5 as seed ortholog is 100%.
Bootstrap support for A3LZN1 as seed ortholog is 100%.

Group of orthologs #275. Best score 663 bits
Score difference with first non-orthologous sequence - C.militaris:663 S.stipitis:663

G3JQM1              	100.00%		A3GFP7              	100.00%
Bootstrap support for G3JQM1 as seed ortholog is 100%.
Bootstrap support for A3GFP7 as seed ortholog is 100%.

Group of orthologs #276. Best score 662 bits
Score difference with first non-orthologous sequence - C.militaris:185 S.stipitis:662

G3JI57              	100.00%		A3GH01              	100.00%
Bootstrap support for G3JI57 as seed ortholog is 99%.
Bootstrap support for A3GH01 as seed ortholog is 100%.

Group of orthologs #277. Best score 662 bits
Score difference with first non-orthologous sequence - C.militaris:662 S.stipitis:588

G3JU91              	100.00%		A3GF68              	100.00%
Bootstrap support for G3JU91 as seed ortholog is 100%.
Bootstrap support for A3GF68 as seed ortholog is 100%.

Group of orthologs #278. Best score 661 bits
Score difference with first non-orthologous sequence - C.militaris:661 S.stipitis:336

G3JFU1              	100.00%		A3LPC5              	100.00%
Bootstrap support for G3JFU1 as seed ortholog is 100%.
Bootstrap support for A3LPC5 as seed ortholog is 100%.

Group of orthologs #279. Best score 661 bits
Score difference with first non-orthologous sequence - C.militaris:661 S.stipitis:661

G3JJM0              	100.00%		A3LW02              	100.00%
Bootstrap support for G3JJM0 as seed ortholog is 100%.
Bootstrap support for A3LW02 as seed ortholog is 100%.

Group of orthologs #280. Best score 659 bits
Score difference with first non-orthologous sequence - C.militaris:659 S.stipitis:659

G3JMF9              	100.00%		A3LRR6              	100.00%
Bootstrap support for G3JMF9 as seed ortholog is 100%.
Bootstrap support for A3LRR6 as seed ortholog is 100%.

Group of orthologs #281. Best score 656 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:656

G3JSD1              	100.00%		A3M0F2              	100.00%
Bootstrap support for G3JSD1 as seed ortholog is 99%.
Bootstrap support for A3M0F2 as seed ortholog is 100%.

Group of orthologs #282. Best score 653 bits
Score difference with first non-orthologous sequence - C.militaris:653 S.stipitis:166

G3J8X7              	100.00%		A3GHS7              	100.00%
Bootstrap support for G3J8X7 as seed ortholog is 100%.
Bootstrap support for A3GHS7 as seed ortholog is 97%.

Group of orthologs #283. Best score 653 bits
Score difference with first non-orthologous sequence - C.militaris:653 S.stipitis:165

G3J998              	100.00%		A3LX66              	100.00%
Bootstrap support for G3J998 as seed ortholog is 100%.
Bootstrap support for A3LX66 as seed ortholog is 64%.
Alternative seed ortholog is A3LYS2 (165 bits away from this cluster)

Group of orthologs #284. Best score 653 bits
Score difference with first non-orthologous sequence - C.militaris:597 S.stipitis:653

G3JF41              	100.00%		A3LU23              	100.00%
Bootstrap support for G3JF41 as seed ortholog is 100%.
Bootstrap support for A3LU23 as seed ortholog is 100%.

Group of orthologs #285. Best score 651 bits
Score difference with first non-orthologous sequence - C.militaris:651 S.stipitis:651

G3J464              	100.00%		A3GEY9              	100.00%
Bootstrap support for G3J464 as seed ortholog is 100%.
Bootstrap support for A3GEY9 as seed ortholog is 100%.

Group of orthologs #286. Best score 651 bits
Score difference with first non-orthologous sequence - C.militaris:651 S.stipitis:651

G3J2U8              	100.00%		A3LUE4              	100.00%
Bootstrap support for G3J2U8 as seed ortholog is 100%.
Bootstrap support for A3LUE4 as seed ortholog is 100%.

Group of orthologs #287. Best score 651 bits
Score difference with first non-orthologous sequence - C.militaris:651 S.stipitis:651

G3JAQ3              	100.00%		A3GHH0              	100.00%
Bootstrap support for G3JAQ3 as seed ortholog is 100%.
Bootstrap support for A3GHH0 as seed ortholog is 100%.

Group of orthologs #288. Best score 651 bits
Score difference with first non-orthologous sequence - C.militaris:651 S.stipitis:651

G3JIK5              	100.00%		A3LUJ3              	100.00%
Bootstrap support for G3JIK5 as seed ortholog is 100%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #289. Best score 650 bits
Score difference with first non-orthologous sequence - C.militaris:650 S.stipitis:650

G3J460              	100.00%		A3LZW0              	100.00%
Bootstrap support for G3J460 as seed ortholog is 100%.
Bootstrap support for A3LZW0 as seed ortholog is 100%.

Group of orthologs #290. Best score 650 bits
Score difference with first non-orthologous sequence - C.militaris:650 S.stipitis:650

G3JN58              	100.00%		A3LQD6              	100.00%
Bootstrap support for G3JN58 as seed ortholog is 100%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #291. Best score 648 bits
Score difference with first non-orthologous sequence - C.militaris:304 S.stipitis:648

G3J2R4              	100.00%		A3LP53              	100.00%
Bootstrap support for G3J2R4 as seed ortholog is 100%.
Bootstrap support for A3LP53 as seed ortholog is 100%.

Group of orthologs #292. Best score 648 bits
Score difference with first non-orthologous sequence - C.militaris:648 S.stipitis:648

G3J751              	100.00%		A3GFH1              	100.00%
Bootstrap support for G3J751 as seed ortholog is 100%.
Bootstrap support for A3GFH1 as seed ortholog is 100%.

Group of orthologs #293. Best score 648 bits
Score difference with first non-orthologous sequence - C.militaris:648 S.stipitis:648

G3JBE2              	100.00%		A3GG50              	100.00%
Bootstrap support for G3JBE2 as seed ortholog is 100%.
Bootstrap support for A3GG50 as seed ortholog is 100%.

Group of orthologs #294. Best score 648 bits
Score difference with first non-orthologous sequence - C.militaris:648 S.stipitis:566

G3JV32              	100.00%		A3LYA7              	100.00%
Bootstrap support for G3JV32 as seed ortholog is 100%.
Bootstrap support for A3LYA7 as seed ortholog is 100%.

Group of orthologs #295. Best score 647 bits
Score difference with first non-orthologous sequence - C.militaris:647 S.stipitis:647

G3JHE9              	100.00%		A3LU20              	100.00%
                    	       		A3GFB4              	15.01%
Bootstrap support for G3JHE9 as seed ortholog is 100%.
Bootstrap support for A3LU20 as seed ortholog is 100%.

Group of orthologs #296. Best score 646 bits
Score difference with first non-orthologous sequence - C.militaris:646 S.stipitis:646

G3JAB3              	100.00%		A3GF95              	100.00%
Bootstrap support for G3JAB3 as seed ortholog is 100%.
Bootstrap support for A3GF95 as seed ortholog is 100%.

Group of orthologs #297. Best score 646 bits
Score difference with first non-orthologous sequence - C.militaris:473 S.stipitis:646

G3JKX3              	100.00%		A3LTK0              	100.00%
Bootstrap support for G3JKX3 as seed ortholog is 100%.
Bootstrap support for A3LTK0 as seed ortholog is 100%.

Group of orthologs #298. Best score 645 bits
Score difference with first non-orthologous sequence - C.militaris:645 S.stipitis:645

G3JG78              	100.00%		A3LR72              	100.00%
Bootstrap support for G3JG78 as seed ortholog is 100%.
Bootstrap support for A3LR72 as seed ortholog is 100%.

Group of orthologs #299. Best score 644 bits
Score difference with first non-orthologous sequence - C.militaris:644 S.stipitis:644

G3JPB1              	100.00%		A3LWB3              	100.00%
G3JBP4              	6.86%		
Bootstrap support for G3JPB1 as seed ortholog is 100%.
Bootstrap support for A3LWB3 as seed ortholog is 100%.

Group of orthologs #300. Best score 644 bits
Score difference with first non-orthologous sequence - C.militaris:644 S.stipitis:644

G3J744              	100.00%		A3GHA0              	100.00%
Bootstrap support for G3J744 as seed ortholog is 100%.
Bootstrap support for A3GHA0 as seed ortholog is 100%.

Group of orthologs #301. Best score 644 bits
Score difference with first non-orthologous sequence - C.militaris:644 S.stipitis:644

G3JP42              	100.00%		A3LQ15              	100.00%
Bootstrap support for G3JP42 as seed ortholog is 100%.
Bootstrap support for A3LQ15 as seed ortholog is 100%.

Group of orthologs #302. Best score 643 bits
Score difference with first non-orthologous sequence - C.militaris:643 S.stipitis:643

G3J9K2              	100.00%		A3GFA7              	100.00%
Bootstrap support for G3J9K2 as seed ortholog is 100%.
Bootstrap support for A3GFA7 as seed ortholog is 100%.

Group of orthologs #303. Best score 643 bits
Score difference with first non-orthologous sequence - C.militaris:420 S.stipitis:643

G3JK62              	100.00%		A3LV87              	100.00%
Bootstrap support for G3JK62 as seed ortholog is 100%.
Bootstrap support for A3LV87 as seed ortholog is 100%.

Group of orthologs #304. Best score 641 bits
Score difference with first non-orthologous sequence - C.militaris:641 S.stipitis:641

G3J3Q8              	100.00%		A3M001              	100.00%
Bootstrap support for G3J3Q8 as seed ortholog is 100%.
Bootstrap support for A3M001 as seed ortholog is 100%.

Group of orthologs #305. Best score 640 bits
Score difference with first non-orthologous sequence - C.militaris:640 S.stipitis:640

G3J5U4              	100.00%		A3GEY5              	100.00%
Bootstrap support for G3J5U4 as seed ortholog is 100%.
Bootstrap support for A3GEY5 as seed ortholog is 100%.

Group of orthologs #306. Best score 640 bits
Score difference with first non-orthologous sequence - C.militaris:640 S.stipitis:640

G3JFF7              	100.00%		A3LX87              	100.00%
Bootstrap support for G3JFF7 as seed ortholog is 100%.
Bootstrap support for A3LX87 as seed ortholog is 100%.

Group of orthologs #307. Best score 639 bits
Score difference with first non-orthologous sequence - C.militaris:639 S.stipitis:639

G3JE72              	100.00%		A3LT99              	100.00%
Bootstrap support for G3JE72 as seed ortholog is 100%.
Bootstrap support for A3LT99 as seed ortholog is 100%.

Group of orthologs #308. Best score 639 bits
Score difference with first non-orthologous sequence - C.militaris:639 S.stipitis:298

G3JSG1              	100.00%		A3LX46              	100.00%
Bootstrap support for G3JSG1 as seed ortholog is 100%.
Bootstrap support for A3LX46 as seed ortholog is 99%.

Group of orthologs #309. Best score 638 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:108

G3JNU1              	100.00%		A3LNX9              	100.00%
G3JTT8              	19.04%		A3GF84              	11.95%
G3JQI2              	5.85%		A3LVM7              	7.72%
Bootstrap support for G3JNU1 as seed ortholog is 99%.
Bootstrap support for A3LNX9 as seed ortholog is 99%.

Group of orthologs #310. Best score 638 bits
Score difference with first non-orthologous sequence - C.militaris:638 S.stipitis:638

G3JHP0              	100.00%		A3LQ55              	100.00%
Bootstrap support for G3JHP0 as seed ortholog is 100%.
Bootstrap support for A3LQ55 as seed ortholog is 100%.

Group of orthologs #311. Best score 636 bits
Score difference with first non-orthologous sequence - C.militaris:636 S.stipitis:404

G3JCS5              	100.00%		A3GFS0              	100.00%
Bootstrap support for G3JCS5 as seed ortholog is 100%.
Bootstrap support for A3GFS0 as seed ortholog is 100%.

Group of orthologs #312. Best score 636 bits
Score difference with first non-orthologous sequence - C.militaris:636 S.stipitis:636

G3JDB9              	100.00%		A3LQX8              	100.00%
Bootstrap support for G3JDB9 as seed ortholog is 100%.
Bootstrap support for A3LQX8 as seed ortholog is 100%.

Group of orthologs #313. Best score 636 bits
Score difference with first non-orthologous sequence - C.militaris:636 S.stipitis:636

G3JTK0              	100.00%		A3LW56              	100.00%
Bootstrap support for G3JTK0 as seed ortholog is 100%.
Bootstrap support for A3LW56 as seed ortholog is 100%.

Group of orthologs #314. Best score 634 bits
Score difference with first non-orthologous sequence - C.militaris:459 S.stipitis:634

G3J3Q7              	100.00%		A3LXQ5              	100.00%
Bootstrap support for G3J3Q7 as seed ortholog is 100%.
Bootstrap support for A3LXQ5 as seed ortholog is 100%.

Group of orthologs #315. Best score 633 bits
Score difference with first non-orthologous sequence - C.militaris:633 S.stipitis:32

G3JRS2              	100.00%		A3LT36              	100.00%
Bootstrap support for G3JRS2 as seed ortholog is 100%.
Bootstrap support for A3LT36 as seed ortholog is 84%.

Group of orthologs #316. Best score 632 bits
Score difference with first non-orthologous sequence - C.militaris:632 S.stipitis:101

G3JMV2              	100.00%		A3LY52              	100.00%
Bootstrap support for G3JMV2 as seed ortholog is 100%.
Bootstrap support for A3LY52 as seed ortholog is 94%.

Group of orthologs #317. Best score 631 bits
Score difference with first non-orthologous sequence - C.militaris:631 S.stipitis:631

G3J6C1              	100.00%		A3LNS2              	100.00%
Bootstrap support for G3J6C1 as seed ortholog is 100%.
Bootstrap support for A3LNS2 as seed ortholog is 100%.

Group of orthologs #318. Best score 631 bits
Score difference with first non-orthologous sequence - C.militaris:631 S.stipitis:631

G3J6W3              	100.00%		A3LY68              	100.00%
Bootstrap support for G3J6W3 as seed ortholog is 100%.
Bootstrap support for A3LY68 as seed ortholog is 100%.

Group of orthologs #319. Best score 630 bits
Score difference with first non-orthologous sequence - C.militaris:630 S.stipitis:630

G3J7T1              	100.00%		A3LX49              	100.00%
Bootstrap support for G3J7T1 as seed ortholog is 100%.
Bootstrap support for A3LX49 as seed ortholog is 100%.

Group of orthologs #320. Best score 629 bits
Score difference with first non-orthologous sequence - C.militaris:629 S.stipitis:450

G3J7K8              	100.00%		A3GHM9              	100.00%
                    	       		A3LR07              	30.67%
Bootstrap support for G3J7K8 as seed ortholog is 100%.
Bootstrap support for A3GHM9 as seed ortholog is 100%.

Group of orthologs #321. Best score 629 bits
Score difference with first non-orthologous sequence - C.militaris:546 S.stipitis:548

G3JT06              	100.00%		A3GI80              	100.00%
Bootstrap support for G3JT06 as seed ortholog is 100%.
Bootstrap support for A3GI80 as seed ortholog is 100%.

Group of orthologs #322. Best score 629 bits
Score difference with first non-orthologous sequence - C.militaris:629 S.stipitis:629

G3JNN2              	100.00%		A3M0K6              	100.00%
Bootstrap support for G3JNN2 as seed ortholog is 100%.
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #323. Best score 628 bits
Score difference with first non-orthologous sequence - C.militaris:628 S.stipitis:628

G3JAR3              	100.00%		A3M058              	100.00%
                    	       		A3GEV9              	31.80%
Bootstrap support for G3JAR3 as seed ortholog is 100%.
Bootstrap support for A3M058 as seed ortholog is 100%.

Group of orthologs #324. Best score 627 bits
Score difference with first non-orthologous sequence - C.militaris:627 S.stipitis:627

G3JKS5              	100.00%		A3LWA5              	100.00%
G3JKQ9              	33.44%		
Bootstrap support for G3JKS5 as seed ortholog is 100%.
Bootstrap support for A3LWA5 as seed ortholog is 100%.

Group of orthologs #325. Best score 627 bits
Score difference with first non-orthologous sequence - C.militaris:627 S.stipitis:627

G3JIB7              	100.00%		A3LRJ9              	100.00%
Bootstrap support for G3JIB7 as seed ortholog is 100%.
Bootstrap support for A3LRJ9 as seed ortholog is 100%.

Group of orthologs #326. Best score 626 bits
Score difference with first non-orthologous sequence - C.militaris:626 S.stipitis:626

G3JCS0              	100.00%		A3LWQ5              	100.00%
Bootstrap support for G3JCS0 as seed ortholog is 100%.
Bootstrap support for A3LWQ5 as seed ortholog is 100%.

Group of orthologs #327. Best score 626 bits
Score difference with first non-orthologous sequence - C.militaris:400 S.stipitis:626

G3JSV2              	100.00%		A3LVC2              	100.00%
Bootstrap support for G3JSV2 as seed ortholog is 100%.
Bootstrap support for A3LVC2 as seed ortholog is 100%.

Group of orthologs #328. Best score 625 bits
Score difference with first non-orthologous sequence - C.militaris:625 S.stipitis:625

G3JGA7              	100.00%		A3LXL0              	100.00%
Bootstrap support for G3JGA7 as seed ortholog is 100%.
Bootstrap support for A3LXL0 as seed ortholog is 100%.

Group of orthologs #329. Best score 625 bits
Score difference with first non-orthologous sequence - C.militaris:625 S.stipitis:625

G3JL40              	100.00%		A3LY29              	100.00%
Bootstrap support for G3JL40 as seed ortholog is 100%.
Bootstrap support for A3LY29 as seed ortholog is 100%.

Group of orthologs #330. Best score 624 bits
Score difference with first non-orthologous sequence - C.militaris:624 S.stipitis:624

G3J771              	100.00%		A3LWZ4              	100.00%
Bootstrap support for G3J771 as seed ortholog is 100%.
Bootstrap support for A3LWZ4 as seed ortholog is 100%.

Group of orthologs #331. Best score 624 bits
Score difference with first non-orthologous sequence - C.militaris:530 S.stipitis:624

G3JU98              	100.00%		A3LWQ1              	100.00%
Bootstrap support for G3JU98 as seed ortholog is 100%.
Bootstrap support for A3LWQ1 as seed ortholog is 100%.

Group of orthologs #332. Best score 623 bits
Score difference with first non-orthologous sequence - C.militaris:623 S.stipitis:218

G3J5W1              	100.00%		A3LTZ6              	100.00%
G3J529              	9.95%		
Bootstrap support for G3J5W1 as seed ortholog is 100%.
Bootstrap support for A3LTZ6 as seed ortholog is 99%.

Group of orthologs #333. Best score 623 bits
Score difference with first non-orthologous sequence - C.militaris:623 S.stipitis:460

G3J3U0              	100.00%		A3LYY5              	100.00%
Bootstrap support for G3J3U0 as seed ortholog is 100%.
Bootstrap support for A3LYY5 as seed ortholog is 100%.

Group of orthologs #334. Best score 622 bits
Score difference with first non-orthologous sequence - C.militaris:622 S.stipitis:313

G3JLN6              	100.00%		A3GGK7              	100.00%
Bootstrap support for G3JLN6 as seed ortholog is 100%.
Bootstrap support for A3GGK7 as seed ortholog is 99%.

Group of orthologs #335. Best score 622 bits
Score difference with first non-orthologous sequence - C.militaris:622 S.stipitis:622

G3JHB6              	100.00%		A3LWW5              	100.00%
Bootstrap support for G3JHB6 as seed ortholog is 100%.
Bootstrap support for A3LWW5 as seed ortholog is 100%.

Group of orthologs #336. Best score 621 bits
Score difference with first non-orthologous sequence - C.militaris:436 S.stipitis:417

G3JJU9              	100.00%		A3GF71              	100.00%
Bootstrap support for G3JJU9 as seed ortholog is 100%.
Bootstrap support for A3GF71 as seed ortholog is 100%.

Group of orthologs #337. Best score 621 bits
Score difference with first non-orthologous sequence - C.militaris:487 S.stipitis:544

G3JLA7              	100.00%		A3LNR1              	100.00%
Bootstrap support for G3JLA7 as seed ortholog is 100%.
Bootstrap support for A3LNR1 as seed ortholog is 100%.

Group of orthologs #338. Best score 621 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:204

G3JMH5              	100.00%		A3LXS8              	100.00%
Bootstrap support for G3JMH5 as seed ortholog is 99%.
Bootstrap support for A3LXS8 as seed ortholog is 99%.

Group of orthologs #339. Best score 620 bits
Score difference with first non-orthologous sequence - C.militaris:620 S.stipitis:620

G3J905              	100.00%		A3LNJ6              	100.00%
Bootstrap support for G3J905 as seed ortholog is 100%.
Bootstrap support for A3LNJ6 as seed ortholog is 100%.

Group of orthologs #340. Best score 620 bits
Score difference with first non-orthologous sequence - C.militaris:620 S.stipitis:620

G3JSB5              	100.00%		A3LU50              	100.00%
Bootstrap support for G3JSB5 as seed ortholog is 100%.
Bootstrap support for A3LU50 as seed ortholog is 100%.

Group of orthologs #341. Best score 619 bits
Score difference with first non-orthologous sequence - C.militaris:619 S.stipitis:619

G3JBF3              	100.00%		A3LQ84              	100.00%
Bootstrap support for G3JBF3 as seed ortholog is 100%.
Bootstrap support for A3LQ84 as seed ortholog is 100%.

Group of orthologs #342. Best score 619 bits
Score difference with first non-orthologous sequence - C.militaris:619 S.stipitis:619

G3JP31              	100.00%		A3LW01              	100.00%
Bootstrap support for G3JP31 as seed ortholog is 100%.
Bootstrap support for A3LW01 as seed ortholog is 100%.

Group of orthologs #343. Best score 615 bits
Score difference with first non-orthologous sequence - C.militaris:615 S.stipitis:497

G3JD93              	100.00%		A3M089              	100.00%
Bootstrap support for G3JD93 as seed ortholog is 100%.
Bootstrap support for A3M089 as seed ortholog is 100%.

Group of orthologs #344. Best score 614 bits
Score difference with first non-orthologous sequence - C.militaris:614 S.stipitis:465

G3J5B2              	100.00%		A3LVT5              	100.00%
Bootstrap support for G3J5B2 as seed ortholog is 100%.
Bootstrap support for A3LVT5 as seed ortholog is 100%.

Group of orthologs #345. Best score 613 bits
Score difference with first non-orthologous sequence - C.militaris:613 S.stipitis:613

G3JUC9              	100.00%		A3LTI6              	100.00%
Bootstrap support for G3JUC9 as seed ortholog is 100%.
Bootstrap support for A3LTI6 as seed ortholog is 100%.

Group of orthologs #346. Best score 611 bits
Score difference with first non-orthologous sequence - C.militaris:611 S.stipitis:611

G3JGU1              	100.00%		A3LNB5              	100.00%
Bootstrap support for G3JGU1 as seed ortholog is 100%.
Bootstrap support for A3LNB5 as seed ortholog is 100%.

Group of orthologs #347. Best score 610 bits
Score difference with first non-orthologous sequence - C.militaris:610 S.stipitis:610

G3JFT8              	100.00%		A3GFK8              	100.00%
Bootstrap support for G3JFT8 as seed ortholog is 100%.
Bootstrap support for A3GFK8 as seed ortholog is 100%.

Group of orthologs #348. Best score 610 bits
Score difference with first non-orthologous sequence - C.militaris:343 S.stipitis:204

G3J7H1              	100.00%		A3LZ03              	100.00%
Bootstrap support for G3J7H1 as seed ortholog is 100%.
Bootstrap support for A3LZ03 as seed ortholog is 100%.

Group of orthologs #349. Best score 610 bits
Score difference with first non-orthologous sequence - C.militaris:610 S.stipitis:610

G3JDV9              	100.00%		A3LUC7              	100.00%
Bootstrap support for G3JDV9 as seed ortholog is 100%.
Bootstrap support for A3LUC7 as seed ortholog is 100%.

Group of orthologs #350. Best score 609 bits
Score difference with first non-orthologous sequence - C.militaris:609 S.stipitis:609

G3JQQ3              	100.00%		A3GH62              	100.00%
Bootstrap support for G3JQQ3 as seed ortholog is 100%.
Bootstrap support for A3GH62 as seed ortholog is 100%.

Group of orthologs #351. Best score 607 bits
Score difference with first non-orthologous sequence - C.militaris:607 S.stipitis:607

G3J8D1              	100.00%		A3LTW6              	100.00%
Bootstrap support for G3J8D1 as seed ortholog is 100%.
Bootstrap support for A3LTW6 as seed ortholog is 100%.

Group of orthologs #352. Best score 607 bits
Score difference with first non-orthologous sequence - C.militaris:607 S.stipitis:607

G3JCI0              	100.00%		A3LTX4              	100.00%
Bootstrap support for G3JCI0 as seed ortholog is 100%.
Bootstrap support for A3LTX4 as seed ortholog is 100%.

Group of orthologs #353. Best score 606 bits
Score difference with first non-orthologous sequence - C.militaris:606 S.stipitis:606

G3J7G7              	100.00%		A3GI11              	100.00%
Bootstrap support for G3J7G7 as seed ortholog is 100%.
Bootstrap support for A3GI11 as seed ortholog is 100%.

Group of orthologs #354. Best score 605 bits
Score difference with first non-orthologous sequence - C.militaris:605 S.stipitis:605

G3J6H2              	100.00%		A3LT44              	100.00%
Bootstrap support for G3J6H2 as seed ortholog is 100%.
Bootstrap support for A3LT44 as seed ortholog is 100%.

Group of orthologs #355. Best score 604 bits
Score difference with first non-orthologous sequence - C.militaris:604 S.stipitis:604

G3JAB6              	100.00%		A3LN99              	100.00%
Bootstrap support for G3JAB6 as seed ortholog is 100%.
Bootstrap support for A3LN99 as seed ortholog is 100%.

Group of orthologs #356. Best score 604 bits
Score difference with first non-orthologous sequence - C.militaris:604 S.stipitis:604

G3J9Y9              	100.00%		A3LYF0              	100.00%
Bootstrap support for G3J9Y9 as seed ortholog is 100%.
Bootstrap support for A3LYF0 as seed ortholog is 100%.

Group of orthologs #357. Best score 604 bits
Score difference with first non-orthologous sequence - C.militaris:341 S.stipitis:604

G3JPJ3              	100.00%		A3LSU8              	100.00%
Bootstrap support for G3JPJ3 as seed ortholog is 100%.
Bootstrap support for A3LSU8 as seed ortholog is 100%.

Group of orthologs #358. Best score 601 bits
Score difference with first non-orthologous sequence - C.militaris:601 S.stipitis:601

G3J4R1              	100.00%		A3LS93              	100.00%
Bootstrap support for G3J4R1 as seed ortholog is 100%.
Bootstrap support for A3LS93 as seed ortholog is 100%.

Group of orthologs #359. Best score 599 bits
Score difference with first non-orthologous sequence - C.militaris:599 S.stipitis:599

G3JLI9              	100.00%		A3LYR5              	100.00%
Bootstrap support for G3JLI9 as seed ortholog is 100%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #360. Best score 598 bits
Score difference with first non-orthologous sequence - C.militaris:306 S.stipitis:598

G3JNC1              	100.00%		A3LNA9              	100.00%
Bootstrap support for G3JNC1 as seed ortholog is 100%.
Bootstrap support for A3LNA9 as seed ortholog is 100%.

Group of orthologs #361. Best score 597 bits
Score difference with first non-orthologous sequence - C.militaris:597 S.stipitis:597

G3JBZ5              	100.00%		A3LUW4              	100.00%
Bootstrap support for G3JBZ5 as seed ortholog is 100%.
Bootstrap support for A3LUW4 as seed ortholog is 100%.

Group of orthologs #362. Best score 597 bits
Score difference with first non-orthologous sequence - C.militaris:597 S.stipitis:597

G3JN84              	100.00%		A3LRP2              	100.00%
Bootstrap support for G3JN84 as seed ortholog is 100%.
Bootstrap support for A3LRP2 as seed ortholog is 100%.

Group of orthologs #363. Best score 596 bits
Score difference with first non-orthologous sequence - C.militaris:596 S.stipitis:596

G3JGA3              	100.00%		A3LZC1              	100.00%
Bootstrap support for G3JGA3 as seed ortholog is 100%.
Bootstrap support for A3LZC1 as seed ortholog is 100%.

Group of orthologs #364. Best score 596 bits
Score difference with first non-orthologous sequence - C.militaris:596 S.stipitis:596

G3JN91              	100.00%		A3LW22              	100.00%
Bootstrap support for G3JN91 as seed ortholog is 100%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #365. Best score 595 bits
Score difference with first non-orthologous sequence - C.militaris:595 S.stipitis:595

G3JFT1              	100.00%		A3LVS2              	100.00%
Bootstrap support for G3JFT1 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #366. Best score 593 bits
Score difference with first non-orthologous sequence - C.militaris:518 S.stipitis:593

G3J4Q2              	100.00%		A3LX50              	100.00%
Bootstrap support for G3J4Q2 as seed ortholog is 100%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #367. Best score 593 bits
Score difference with first non-orthologous sequence - C.militaris:290 S.stipitis:593

G3JT47              	100.00%		A3LSJ7              	100.00%
Bootstrap support for G3JT47 as seed ortholog is 100%.
Bootstrap support for A3LSJ7 as seed ortholog is 100%.

Group of orthologs #368. Best score 592 bits
Score difference with first non-orthologous sequence - C.militaris:592 S.stipitis:592

G3J6C3              	100.00%		A3GGG1              	100.00%
Bootstrap support for G3J6C3 as seed ortholog is 100%.
Bootstrap support for A3GGG1 as seed ortholog is 100%.

Group of orthologs #369. Best score 592 bits
Score difference with first non-orthologous sequence - C.militaris:592 S.stipitis:592

G3JR82              	100.00%		A3LNS3              	100.00%
Bootstrap support for G3JR82 as seed ortholog is 100%.
Bootstrap support for A3LNS3 as seed ortholog is 100%.

Group of orthologs #370. Best score 592 bits
Score difference with first non-orthologous sequence - C.militaris:592 S.stipitis:592

G3JP38              	100.00%		A3LY63              	100.00%
Bootstrap support for G3JP38 as seed ortholog is 100%.
Bootstrap support for A3LY63 as seed ortholog is 100%.

Group of orthologs #371. Best score 591 bits
Score difference with first non-orthologous sequence - C.militaris:591 S.stipitis:591

G3J4R7              	100.00%		A3LWX0              	100.00%
Bootstrap support for G3J4R7 as seed ortholog is 100%.
Bootstrap support for A3LWX0 as seed ortholog is 100%.

Group of orthologs #372. Best score 590 bits
Score difference with first non-orthologous sequence - C.militaris:590 S.stipitis:590

G3JAP5              	100.00%		A3LVH6              	100.00%
Bootstrap support for G3JAP5 as seed ortholog is 100%.
Bootstrap support for A3LVH6 as seed ortholog is 100%.

Group of orthologs #373. Best score 589 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:149

G3J881              	100.00%		A3GI48              	100.00%
Bootstrap support for G3J881 as seed ortholog is 100%.
Bootstrap support for A3GI48 as seed ortholog is 99%.

Group of orthologs #374. Best score 589 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:589

G3J446              	100.00%		A3LYE2              	100.00%
Bootstrap support for G3J446 as seed ortholog is 98%.
Bootstrap support for A3LYE2 as seed ortholog is 100%.

Group of orthologs #375. Best score 588 bits
Score difference with first non-orthologous sequence - C.militaris:588 S.stipitis:588

G3JRC5              	100.00%		A3GI18              	100.00%
Bootstrap support for G3JRC5 as seed ortholog is 100%.
Bootstrap support for A3GI18 as seed ortholog is 100%.

Group of orthologs #376. Best score 586 bits
Score difference with first non-orthologous sequence - C.militaris:586 S.stipitis:586

G3JFZ7              	100.00%		A3LYR4              	100.00%
Bootstrap support for G3JFZ7 as seed ortholog is 100%.
Bootstrap support for A3LYR4 as seed ortholog is 100%.

Group of orthologs #377. Best score 586 bits
Score difference with first non-orthologous sequence - C.militaris:586 S.stipitis:586

G3JMG3              	100.00%		A3LUJ5              	100.00%
Bootstrap support for G3JMG3 as seed ortholog is 100%.
Bootstrap support for A3LUJ5 as seed ortholog is 100%.

Group of orthologs #378. Best score 584 bits
Score difference with first non-orthologous sequence - C.militaris:584 S.stipitis:584

G3JJP7              	100.00%		A3GHA2              	100.00%
Bootstrap support for G3JJP7 as seed ortholog is 100%.
Bootstrap support for A3GHA2 as seed ortholog is 100%.

Group of orthologs #379. Best score 583 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:583

G3JS04              	100.00%		A3LNM1              	100.00%
                    	       		A3LXA2              	73.50%
                    	       		A3LUP5              	73.50%
                    	       		A3LWN5              	64.07%
                    	       		A3GIC0              	41.30%
Bootstrap support for G3JS04 as seed ortholog is 87%.
Bootstrap support for A3LNM1 as seed ortholog is 100%.

Group of orthologs #380. Best score 583 bits
Score difference with first non-orthologous sequence - C.militaris:583 S.stipitis:583

G3J7S6              	100.00%		A3LS12              	100.00%
Bootstrap support for G3J7S6 as seed ortholog is 100%.
Bootstrap support for A3LS12 as seed ortholog is 100%.

Group of orthologs #381. Best score 583 bits
Score difference with first non-orthologous sequence - C.militaris:497 S.stipitis:502

G3JD90              	100.00%		A3LPQ2              	100.00%
Bootstrap support for G3JD90 as seed ortholog is 100%.
Bootstrap support for A3LPQ2 as seed ortholog is 100%.

Group of orthologs #382. Best score 583 bits
Score difference with first non-orthologous sequence - C.militaris:583 S.stipitis:583

G3JD46              	100.00%		A3M0F1              	100.00%
Bootstrap support for G3JD46 as seed ortholog is 100%.
Bootstrap support for A3M0F1 as seed ortholog is 100%.

Group of orthologs #383. Best score 582 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:251

G3JF77              	100.00%		A3GGS5              	100.00%
Bootstrap support for G3JF77 as seed ortholog is 99%.
Bootstrap support for A3GGS5 as seed ortholog is 100%.

Group of orthologs #384. Best score 581 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:532

G3J6G2              	100.00%		A3LR52              	100.00%
Bootstrap support for G3J6G2 as seed ortholog is 98%.
Bootstrap support for A3LR52 as seed ortholog is 100%.

Group of orthologs #385. Best score 581 bits
Score difference with first non-orthologous sequence - C.militaris:458 S.stipitis:581

G3J7R5              	100.00%		A3LY27              	100.00%
Bootstrap support for G3J7R5 as seed ortholog is 100%.
Bootstrap support for A3LY27 as seed ortholog is 100%.

Group of orthologs #386. Best score 581 bits
Score difference with first non-orthologous sequence - C.militaris:581 S.stipitis:581

G3JLN8              	100.00%		A3M0A5              	100.00%
Bootstrap support for G3JLN8 as seed ortholog is 100%.
Bootstrap support for A3M0A5 as seed ortholog is 100%.

Group of orthologs #387. Best score 580 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:580

G3J6L3              	100.00%		A3LRC9              	100.00%
Bootstrap support for G3J6L3 as seed ortholog is 100%.
Bootstrap support for A3LRC9 as seed ortholog is 100%.

Group of orthologs #388. Best score 580 bits
Score difference with first non-orthologous sequence - C.militaris:424 S.stipitis:298

G3JE03              	100.00%		A3LN91              	100.00%
Bootstrap support for G3JE03 as seed ortholog is 100%.
Bootstrap support for A3LN91 as seed ortholog is 100%.

Group of orthologs #389. Best score 579 bits
Score difference with first non-orthologous sequence - C.militaris:579 S.stipitis:418

G3J6G5              	100.00%		A3GGG5              	100.00%
Bootstrap support for G3J6G5 as seed ortholog is 100%.
Bootstrap support for A3GGG5 as seed ortholog is 100%.

Group of orthologs #390. Best score 579 bits
Score difference with first non-orthologous sequence - C.militaris:482 S.stipitis:579

G3J5D6              	100.00%		A3LV77              	100.00%
Bootstrap support for G3J5D6 as seed ortholog is 100%.
Bootstrap support for A3LV77 as seed ortholog is 100%.

Group of orthologs #391. Best score 579 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:300

G3JHW4              	100.00%		A3LNE3              	100.00%
Bootstrap support for G3JHW4 as seed ortholog is 99%.
Bootstrap support for A3LNE3 as seed ortholog is 100%.

Group of orthologs #392. Best score 578 bits
Score difference with first non-orthologous sequence - C.militaris:578 S.stipitis:578

G3JBU7              	100.00%		A3LRM1              	100.00%
Bootstrap support for G3JBU7 as seed ortholog is 100%.
Bootstrap support for A3LRM1 as seed ortholog is 100%.

Group of orthologs #393. Best score 578 bits
Score difference with first non-orthologous sequence - C.militaris:46 S.stipitis:578

G3JUJ8              	100.00%		A3LZV3              	100.00%
Bootstrap support for G3JUJ8 as seed ortholog is 84%.
Bootstrap support for A3LZV3 as seed ortholog is 100%.

Group of orthologs #394. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:256 S.stipitis:297

G3J5S4              	100.00%		A3GFQ1              	100.00%
Bootstrap support for G3J5S4 as seed ortholog is 100%.
Bootstrap support for A3GFQ1 as seed ortholog is 100%.

Group of orthologs #395. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:577 S.stipitis:577

G3JR69              	100.00%		A3GI74              	100.00%
Bootstrap support for G3JR69 as seed ortholog is 100%.
Bootstrap support for A3GI74 as seed ortholog is 100%.

Group of orthologs #396. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:577 S.stipitis:577

G3JT79              	100.00%		A3LUY2              	100.00%
Bootstrap support for G3JT79 as seed ortholog is 100%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #397. Best score 576 bits
Score difference with first non-orthologous sequence - C.militaris:576 S.stipitis:576

G3JNT9              	100.00%		A3GHY0              	100.00%
Bootstrap support for G3JNT9 as seed ortholog is 100%.
Bootstrap support for A3GHY0 as seed ortholog is 100%.

Group of orthologs #398. Best score 575 bits
Score difference with first non-orthologous sequence - C.militaris:370 S.stipitis:575

G3JHW9              	100.00%		A3LUT9              	100.00%
                    	       		A3LZE5              	9.85%
Bootstrap support for G3JHW9 as seed ortholog is 100%.
Bootstrap support for A3LUT9 as seed ortholog is 100%.

Group of orthologs #399. Best score 575 bits
Score difference with first non-orthologous sequence - C.militaris:575 S.stipitis:575

G3JJ96              	100.00%		A3LRA4              	100.00%
Bootstrap support for G3JJ96 as seed ortholog is 100%.
Bootstrap support for A3LRA4 as seed ortholog is 100%.

Group of orthologs #400. Best score 575 bits
Score difference with first non-orthologous sequence - C.militaris:575 S.stipitis:575

G3JKM4              	100.00%		A3LW82              	100.00%
Bootstrap support for G3JKM4 as seed ortholog is 100%.
Bootstrap support for A3LW82 as seed ortholog is 100%.

Group of orthologs #401. Best score 575 bits
Score difference with first non-orthologous sequence - C.militaris:575 S.stipitis:575

G3JHW7              	100.00%		A3M0A1              	100.00%
Bootstrap support for G3JHW7 as seed ortholog is 100%.
Bootstrap support for A3M0A1 as seed ortholog is 100%.

Group of orthologs #402. Best score 574 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:110

G3JHE4              	100.00%		A3LY85              	100.00%
Bootstrap support for G3JHE4 as seed ortholog is 99%.
Bootstrap support for A3LY85 as seed ortholog is 99%.

Group of orthologs #403. Best score 572 bits
Score difference with first non-orthologous sequence - C.militaris:572 S.stipitis:572

G3JLP4              	100.00%		A3GH21              	100.00%
Bootstrap support for G3JLP4 as seed ortholog is 100%.
Bootstrap support for A3GH21 as seed ortholog is 100%.

Group of orthologs #404. Best score 571 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:294

G3JP92              	100.00%		A3GFV3              	100.00%
Bootstrap support for G3JP92 as seed ortholog is 100%.
Bootstrap support for A3GFV3 as seed ortholog is 100%.

Group of orthologs #405. Best score 570 bits
Score difference with first non-orthologous sequence - C.militaris:570 S.stipitis:570

G3JKA3              	100.00%		A3LVT2              	100.00%
Bootstrap support for G3JKA3 as seed ortholog is 100%.
Bootstrap support for A3LVT2 as seed ortholog is 100%.

Group of orthologs #406. Best score 569 bits
Score difference with first non-orthologous sequence - C.militaris:227 S.stipitis:569

G3J5B8              	100.00%		A3LXW3              	100.00%
Bootstrap support for G3J5B8 as seed ortholog is 100%.
Bootstrap support for A3LXW3 as seed ortholog is 100%.

Group of orthologs #407. Best score 569 bits
Score difference with first non-orthologous sequence - C.militaris:400 S.stipitis:569

G3JPV8              	100.00%		A3LRG1              	100.00%
Bootstrap support for G3JPV8 as seed ortholog is 100%.
Bootstrap support for A3LRG1 as seed ortholog is 100%.

Group of orthologs #408. Best score 566 bits
Score difference with first non-orthologous sequence - C.militaris:440 S.stipitis:566

G3JBF6              	100.00%		A3GFK1              	100.00%
Bootstrap support for G3JBF6 as seed ortholog is 100%.
Bootstrap support for A3GFK1 as seed ortholog is 100%.

Group of orthologs #409. Best score 566 bits
Score difference with first non-orthologous sequence - C.militaris:566 S.stipitis:566

G3JH88              	100.00%		A3GG12              	100.00%
Bootstrap support for G3JH88 as seed ortholog is 100%.
Bootstrap support for A3GG12 as seed ortholog is 100%.

Group of orthologs #410. Best score 565 bits
Score difference with first non-orthologous sequence - C.militaris:464 S.stipitis:565

G3JC51              	100.00%		A3GHS6              	100.00%
Bootstrap support for G3JC51 as seed ortholog is 100%.
Bootstrap support for A3GHS6 as seed ortholog is 100%.

Group of orthologs #411. Best score 565 bits
Score difference with first non-orthologous sequence - C.militaris:342 S.stipitis:565

G3JLM9              	100.00%		A3LQA3              	100.00%
Bootstrap support for G3JLM9 as seed ortholog is 100%.
Bootstrap support for A3LQA3 as seed ortholog is 100%.

Group of orthologs #412. Best score 564 bits
Score difference with first non-orthologous sequence - C.militaris:564 S.stipitis:564

G3JFC7              	100.00%		A3LRK4              	100.00%
Bootstrap support for G3JFC7 as seed ortholog is 100%.
Bootstrap support for A3LRK4 as seed ortholog is 100%.

Group of orthologs #413. Best score 564 bits
Score difference with first non-orthologous sequence - C.militaris:564 S.stipitis:564

G3JEL3              	100.00%		A3LW19              	100.00%
Bootstrap support for G3JEL3 as seed ortholog is 100%.
Bootstrap support for A3LW19 as seed ortholog is 100%.

Group of orthologs #414. Best score 564 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:32

G3JJL2              	100.00%		A3LRD1              	100.00%
Bootstrap support for G3JJL2 as seed ortholog is 99%.
Bootstrap support for A3LRD1 as seed ortholog is 75%.

Group of orthologs #415. Best score 563 bits
Score difference with first non-orthologous sequence - C.militaris:202 S.stipitis:563

G3JFX5              	100.00%		A3LTX9              	100.00%
Bootstrap support for G3JFX5 as seed ortholog is 100%.
Bootstrap support for A3LTX9 as seed ortholog is 100%.

Group of orthologs #416. Best score 562 bits
Score difference with first non-orthologous sequence - C.militaris:357 S.stipitis:256

G3J4Y8              	100.00%		A3GFI4              	100.00%
Bootstrap support for G3J4Y8 as seed ortholog is 100%.
Bootstrap support for A3GFI4 as seed ortholog is 100%.

Group of orthologs #417. Best score 562 bits
Score difference with first non-orthologous sequence - C.militaris:562 S.stipitis:562

G3J4B0              	100.00%		A3GGX7              	100.00%
Bootstrap support for G3J4B0 as seed ortholog is 100%.
Bootstrap support for A3GGX7 as seed ortholog is 100%.

Group of orthologs #418. Best score 562 bits
Score difference with first non-orthologous sequence - C.militaris:562 S.stipitis:562

G3JL41              	100.00%		A3LWV1              	100.00%
Bootstrap support for G3JL41 as seed ortholog is 100%.
Bootstrap support for A3LWV1 as seed ortholog is 100%.

Group of orthologs #419. Best score 561 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:561

G3JQ79              	100.00%		A3GFY2              	100.00%
G3J6U4              	28.49%		A3GF02              	14.73%
Bootstrap support for G3JQ79 as seed ortholog is 99%.
Bootstrap support for A3GFY2 as seed ortholog is 100%.

Group of orthologs #420. Best score 561 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:282

G3JGL3              	100.00%		A3GHP8              	100.00%
Bootstrap support for G3JGL3 as seed ortholog is 99%.
Bootstrap support for A3GHP8 as seed ortholog is 100%.

Group of orthologs #421. Best score 561 bits
Score difference with first non-orthologous sequence - C.militaris:497 S.stipitis:561

G3JCT3              	100.00%		A3LY49              	100.00%
Bootstrap support for G3JCT3 as seed ortholog is 100%.
Bootstrap support for A3LY49 as seed ortholog is 100%.

Group of orthologs #422. Best score 561 bits
Score difference with first non-orthologous sequence - C.militaris:561 S.stipitis:561

G3JKH5              	100.00%		A3LWJ2              	100.00%
Bootstrap support for G3JKH5 as seed ortholog is 100%.
Bootstrap support for A3LWJ2 as seed ortholog is 100%.

Group of orthologs #423. Best score 559 bits
Score difference with first non-orthologous sequence - C.militaris:559 S.stipitis:559

G3J8A4              	100.00%		A3LUZ6              	100.00%
Bootstrap support for G3J8A4 as seed ortholog is 100%.
Bootstrap support for A3LUZ6 as seed ortholog is 100%.

Group of orthologs #424. Best score 559 bits
Score difference with first non-orthologous sequence - C.militaris:559 S.stipitis:559

G3JN43              	100.00%		A3GHJ3              	100.00%
Bootstrap support for G3JN43 as seed ortholog is 100%.
Bootstrap support for A3GHJ3 as seed ortholog is 100%.

Group of orthologs #425. Best score 559 bits
Score difference with first non-orthologous sequence - C.militaris:559 S.stipitis:559

G3JKW7              	100.00%		A3LVL3              	100.00%
Bootstrap support for G3JKW7 as seed ortholog is 100%.
Bootstrap support for A3LVL3 as seed ortholog is 100%.

Group of orthologs #426. Best score 559 bits
Score difference with first non-orthologous sequence - C.militaris:559 S.stipitis:559

G3JQ51              	100.00%		A3LT76              	100.00%
Bootstrap support for G3JQ51 as seed ortholog is 100%.
Bootstrap support for A3LT76 as seed ortholog is 100%.

Group of orthologs #427. Best score 557 bits
Score difference with first non-orthologous sequence - C.militaris:557 S.stipitis:557

G3JDB0              	100.00%		A3LMW8              	100.00%
Bootstrap support for G3JDB0 as seed ortholog is 100%.
Bootstrap support for A3LMW8 as seed ortholog is 100%.

Group of orthologs #428. Best score 555 bits
Score difference with first non-orthologous sequence - C.militaris:511 S.stipitis:555

G3JIA0              	100.00%		A3LUA5              	100.00%
                    	       		A3GGR1              	53.07%
Bootstrap support for G3JIA0 as seed ortholog is 100%.
Bootstrap support for A3LUA5 as seed ortholog is 100%.

Group of orthologs #429. Best score 555 bits
Score difference with first non-orthologous sequence - C.militaris:474 S.stipitis:555

G3JU30              	100.00%		A3GHA5              	100.00%
G3J6K2              	62.79%		
Bootstrap support for G3JU30 as seed ortholog is 100%.
Bootstrap support for A3GHA5 as seed ortholog is 100%.

Group of orthologs #430. Best score 555 bits
Score difference with first non-orthologous sequence - C.militaris:389 S.stipitis:344

G3JBS7              	100.00%		A3LSN3              	100.00%
Bootstrap support for G3JBS7 as seed ortholog is 100%.
Bootstrap support for A3LSN3 as seed ortholog is 100%.

Group of orthologs #431. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:554 S.stipitis:554

G3J7G2              	100.00%		A3LPM3              	100.00%
Bootstrap support for G3J7G2 as seed ortholog is 100%.
Bootstrap support for A3LPM3 as seed ortholog is 100%.

Group of orthologs #432. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:554 S.stipitis:554

G3J993              	100.00%		A3LQP9              	100.00%
Bootstrap support for G3J993 as seed ortholog is 100%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #433. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:554 S.stipitis:554

G3JI38              	100.00%		A3GFA4              	100.00%
Bootstrap support for G3JI38 as seed ortholog is 100%.
Bootstrap support for A3GFA4 as seed ortholog is 100%.

Group of orthologs #434. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:554 S.stipitis:554

G3JN85              	100.00%		A3LN88              	100.00%
Bootstrap support for G3JN85 as seed ortholog is 100%.
Bootstrap support for A3LN88 as seed ortholog is 100%.

Group of orthologs #435. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:291 S.stipitis:389

G3JPI2              	100.00%		A3LMX5              	100.00%
Bootstrap support for G3JPI2 as seed ortholog is 100%.
Bootstrap support for A3LMX5 as seed ortholog is 100%.

Group of orthologs #436. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:423

G3JK01              	100.00%		A3M0M1              	100.00%
Bootstrap support for G3JK01 as seed ortholog is 99%.
Bootstrap support for A3M0M1 as seed ortholog is 100%.

Group of orthologs #437. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:554 S.stipitis:554

G3JQI3              	100.00%		A3LWI3              	100.00%
Bootstrap support for G3JQI3 as seed ortholog is 100%.
Bootstrap support for A3LWI3 as seed ortholog is 100%.

Group of orthologs #438. Best score 552 bits
Score difference with first non-orthologous sequence - C.militaris:403 S.stipitis:148

G3J3V3              	100.00%		A3GF15              	100.00%
Bootstrap support for G3J3V3 as seed ortholog is 100%.
Bootstrap support for A3GF15 as seed ortholog is 100%.

Group of orthologs #439. Best score 552 bits
Score difference with first non-orthologous sequence - C.militaris:552 S.stipitis:552

G3J5V4              	100.00%		A3LVD3              	100.00%
Bootstrap support for G3J5V4 as seed ortholog is 100%.
Bootstrap support for A3LVD3 as seed ortholog is 100%.

Group of orthologs #440. Best score 552 bits
Score difference with first non-orthologous sequence - C.militaris:552 S.stipitis:552

G3JDP7              	100.00%		A3LWQ6              	100.00%
Bootstrap support for G3JDP7 as seed ortholog is 100%.
Bootstrap support for A3LWQ6 as seed ortholog is 100%.

Group of orthologs #441. Best score 550 bits
Score difference with first non-orthologous sequence - C.militaris:550 S.stipitis:550

G3JDS9              	100.00%		A3GGA8              	100.00%
Bootstrap support for G3JDS9 as seed ortholog is 100%.
Bootstrap support for A3GGA8 as seed ortholog is 100%.

Group of orthologs #442. Best score 548 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:500

G3JAA9              	100.00%		A3LT94              	100.00%
Bootstrap support for G3JAA9 as seed ortholog is 100%.
Bootstrap support for A3LT94 as seed ortholog is 100%.

Group of orthologs #443. Best score 548 bits
Score difference with first non-orthologous sequence - C.militaris:548 S.stipitis:548

G3J7P3              	100.00%		A3LW23              	100.00%
Bootstrap support for G3J7P3 as seed ortholog is 100%.
Bootstrap support for A3LW23 as seed ortholog is 100%.

Group of orthologs #444. Best score 546 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:281

G3JU07              	100.00%		A3LQ78              	100.00%
G3JP00              	5.40%		
Bootstrap support for G3JU07 as seed ortholog is 97%.
Bootstrap support for A3LQ78 as seed ortholog is 100%.

Group of orthologs #445. Best score 546 bits
Score difference with first non-orthologous sequence - C.militaris:430 S.stipitis:407

G3JPH7              	100.00%		A3LV40              	100.00%
Bootstrap support for G3JPH7 as seed ortholog is 100%.
Bootstrap support for A3LV40 as seed ortholog is 100%.

Group of orthologs #446. Best score 544 bits
Score difference with first non-orthologous sequence - C.militaris:544 S.stipitis:544

G3J3L8              	100.00%		A3LS04              	100.00%
Bootstrap support for G3J3L8 as seed ortholog is 100%.
Bootstrap support for A3LS04 as seed ortholog is 100%.

Group of orthologs #447. Best score 544 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:544

G3JSJ9              	100.00%		A3LST3              	100.00%
Bootstrap support for G3JSJ9 as seed ortholog is 99%.
Bootstrap support for A3LST3 as seed ortholog is 100%.

Group of orthologs #448. Best score 544 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:544

G3JTB1              	100.00%		A3LV50              	100.00%
Bootstrap support for G3JTB1 as seed ortholog is 100%.
Bootstrap support for A3LV50 as seed ortholog is 100%.

Group of orthologs #449. Best score 543 bits
Score difference with first non-orthologous sequence - C.militaris:543 S.stipitis:543

G3JQ44              	100.00%		A3LUU6              	100.00%
Bootstrap support for G3JQ44 as seed ortholog is 100%.
Bootstrap support for A3LUU6 as seed ortholog is 100%.

Group of orthologs #450. Best score 542 bits
Score difference with first non-orthologous sequence - C.militaris:542 S.stipitis:542

G3JL55              	100.00%		A3LWA1              	100.00%
Bootstrap support for G3JL55 as seed ortholog is 100%.
Bootstrap support for A3LWA1 as seed ortholog is 100%.

Group of orthologs #451. Best score 542 bits
Score difference with first non-orthologous sequence - C.militaris:542 S.stipitis:542

G3JM10              	100.00%		A3LY82              	100.00%
Bootstrap support for G3JM10 as seed ortholog is 100%.
Bootstrap support for A3LY82 as seed ortholog is 100%.

Group of orthologs #452. Best score 541 bits
Score difference with first non-orthologous sequence - C.militaris:541 S.stipitis:541

G3JAC2              	100.00%		A3LQL4              	100.00%
Bootstrap support for G3JAC2 as seed ortholog is 100%.
Bootstrap support for A3LQL4 as seed ortholog is 100%.

Group of orthologs #453. Best score 540 bits
Score difference with first non-orthologous sequence - C.militaris:540 S.stipitis:540

G3J601              	100.00%		A3GGB4              	100.00%
Bootstrap support for G3J601 as seed ortholog is 100%.
Bootstrap support for A3GGB4 as seed ortholog is 100%.

Group of orthologs #454. Best score 539 bits
Score difference with first non-orthologous sequence - C.militaris:539 S.stipitis:539

G3J450              	100.00%		A3LQN7              	100.00%
Bootstrap support for G3J450 as seed ortholog is 100%.
Bootstrap support for A3LQN7 as seed ortholog is 100%.

Group of orthologs #455. Best score 539 bits
Score difference with first non-orthologous sequence - C.militaris:308 S.stipitis:445

G3JJT6              	100.00%		A3M060              	100.00%
Bootstrap support for G3JJT6 as seed ortholog is 100%.
Bootstrap support for A3M060 as seed ortholog is 100%.

Group of orthologs #456. Best score 538 bits
Score difference with first non-orthologous sequence - C.militaris:538 S.stipitis:164

G3JTC7              	100.00%		A3GI43              	100.00%
                    	       		A3LX05              	75.38%
                    	       		A3LRQ0              	41.07%
Bootstrap support for G3JTC7 as seed ortholog is 100%.
Bootstrap support for A3GI43 as seed ortholog is 99%.

Group of orthologs #457. Best score 538 bits
Score difference with first non-orthologous sequence - C.militaris:538 S.stipitis:538

G3J3W7              	100.00%		A3LQ43              	100.00%
Bootstrap support for G3J3W7 as seed ortholog is 100%.
Bootstrap support for A3LQ43 as seed ortholog is 100%.

Group of orthologs #458. Best score 538 bits
Score difference with first non-orthologous sequence - C.militaris:538 S.stipitis:538

G3JKP2              	100.00%		A3GGQ5              	100.00%
Bootstrap support for G3JKP2 as seed ortholog is 100%.
Bootstrap support for A3GGQ5 as seed ortholog is 100%.

Group of orthologs #459. Best score 538 bits
Score difference with first non-orthologous sequence - C.militaris:538 S.stipitis:538

G3JSJ1              	100.00%		A3GHT7              	100.00%
Bootstrap support for G3JSJ1 as seed ortholog is 100%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #460. Best score 537 bits
Score difference with first non-orthologous sequence - C.militaris:537 S.stipitis:537

G3JJX6              	100.00%		A3LTL9              	100.00%
Bootstrap support for G3JJX6 as seed ortholog is 100%.
Bootstrap support for A3LTL9 as seed ortholog is 100%.

Group of orthologs #461. Best score 537 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:252

G3JNC3              	100.00%		A3M013              	100.00%
Bootstrap support for G3JNC3 as seed ortholog is 99%.
Bootstrap support for A3M013 as seed ortholog is 100%.

Group of orthologs #462. Best score 537 bits
Score difference with first non-orthologous sequence - C.militaris:387 S.stipitis:243

G3JV00              	100.00%		A3LZQ5              	100.00%
Bootstrap support for G3JV00 as seed ortholog is 100%.
Bootstrap support for A3LZQ5 as seed ortholog is 100%.

Group of orthologs #463. Best score 535 bits
Score difference with first non-orthologous sequence - C.militaris:322 S.stipitis:351

G3JH01              	100.00%		A3LRW2              	100.00%
Bootstrap support for G3JH01 as seed ortholog is 100%.
Bootstrap support for A3LRW2 as seed ortholog is 100%.

Group of orthologs #464. Best score 534 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:231

G3J5L7              	100.00%		A3M0J7              	100.00%
Bootstrap support for G3J5L7 as seed ortholog is 99%.
Bootstrap support for A3M0J7 as seed ortholog is 99%.

Group of orthologs #465. Best score 533 bits
Score difference with first non-orthologous sequence - C.militaris:533 S.stipitis:454

G3JL35              	100.00%		A3LN65              	100.00%
G3JMJ6              	20.66%		
Bootstrap support for G3JL35 as seed ortholog is 100%.
Bootstrap support for A3LN65 as seed ortholog is 100%.

Group of orthologs #466. Best score 532 bits
Score difference with first non-orthologous sequence - C.militaris:249 S.stipitis:214

G3JT43              	100.00%		A3LQF6              	100.00%
Bootstrap support for G3JT43 as seed ortholog is 100%.
Bootstrap support for A3LQF6 as seed ortholog is 100%.

Group of orthologs #467. Best score 532 bits
Score difference with first non-orthologous sequence - C.militaris:325 S.stipitis:532

G3JNU2              	100.00%		A3LX59              	100.00%
Bootstrap support for G3JNU2 as seed ortholog is 100%.
Bootstrap support for A3LX59 as seed ortholog is 100%.

Group of orthologs #468. Best score 530 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:530

G3JHN0              	100.00%		A3LRF8              	100.00%
Bootstrap support for G3JHN0 as seed ortholog is 98%.
Bootstrap support for A3LRF8 as seed ortholog is 100%.

Group of orthologs #469. Best score 530 bits
Score difference with first non-orthologous sequence - C.militaris:530 S.stipitis:530

G3JRD1              	100.00%		A3LUT0              	100.00%
Bootstrap support for G3JRD1 as seed ortholog is 100%.
Bootstrap support for A3LUT0 as seed ortholog is 100%.

Group of orthologs #470. Best score 529 bits
Score difference with first non-orthologous sequence - C.militaris:529 S.stipitis:529

G3J8H8              	100.00%		A3LRB2              	100.00%
Bootstrap support for G3J8H8 as seed ortholog is 100%.
Bootstrap support for A3LRB2 as seed ortholog is 100%.

Group of orthologs #471. Best score 529 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:199

G3JNI4              	100.00%		A3GG77              	100.00%
Bootstrap support for G3JNI4 as seed ortholog is 97%.
Bootstrap support for A3GG77 as seed ortholog is 99%.

Group of orthologs #472. Best score 528 bits
Score difference with first non-orthologous sequence - C.militaris:528 S.stipitis:528

G3JH47              	100.00%		A3LNC1              	100.00%
Bootstrap support for G3JH47 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #473. Best score 528 bits
Score difference with first non-orthologous sequence - C.militaris:528 S.stipitis:528

G3JIR9              	100.00%		A3LXN7              	100.00%
Bootstrap support for G3JIR9 as seed ortholog is 100%.
Bootstrap support for A3LXN7 as seed ortholog is 100%.

Group of orthologs #474. Best score 528 bits
Score difference with first non-orthologous sequence - C.militaris:528 S.stipitis:528

G3JRE3              	100.00%		A3LVC4              	100.00%
Bootstrap support for G3JRE3 as seed ortholog is 100%.
Bootstrap support for A3LVC4 as seed ortholog is 100%.

Group of orthologs #475. Best score 528 bits
Score difference with first non-orthologous sequence - C.militaris:528 S.stipitis:528

G3JQ22              	100.00%		A3LZ98              	100.00%
Bootstrap support for G3JQ22 as seed ortholog is 100%.
Bootstrap support for A3LZ98 as seed ortholog is 100%.

Group of orthologs #476. Best score 527 bits
Score difference with first non-orthologous sequence - C.militaris:527 S.stipitis:527

G3JKZ6              	100.00%		A3LZ36              	100.00%
Bootstrap support for G3JKZ6 as seed ortholog is 100%.
Bootstrap support for A3LZ36 as seed ortholog is 100%.

Group of orthologs #477. Best score 526 bits
Score difference with first non-orthologous sequence - C.militaris:526 S.stipitis:526

G3JQW1              	100.00%		A3LTD9              	100.00%
Bootstrap support for G3JQW1 as seed ortholog is 100%.
Bootstrap support for A3LTD9 as seed ortholog is 100%.

Group of orthologs #478. Best score 525 bits
Score difference with first non-orthologous sequence - C.militaris:327 S.stipitis:436

G3JPL1              	100.00%		A3GFR9              	100.00%
Bootstrap support for G3JPL1 as seed ortholog is 100%.
Bootstrap support for A3GFR9 as seed ortholog is 100%.

Group of orthologs #479. Best score 525 bits
Score difference with first non-orthologous sequence - C.militaris:458 S.stipitis:525

G3JNK4              	100.00%		A3LRC4              	100.00%
Bootstrap support for G3JNK4 as seed ortholog is 100%.
Bootstrap support for A3LRC4 as seed ortholog is 100%.

Group of orthologs #480. Best score 525 bits
Score difference with first non-orthologous sequence - C.militaris:525 S.stipitis:315

G3JQ55              	100.00%		A3LT74              	100.00%
Bootstrap support for G3JQ55 as seed ortholog is 100%.
Bootstrap support for A3LT74 as seed ortholog is 100%.

Group of orthologs #481. Best score 525 bits
Score difference with first non-orthologous sequence - C.militaris:525 S.stipitis:525

G3JSB2              	100.00%		A3M0I8              	100.00%
Bootstrap support for G3JSB2 as seed ortholog is 100%.
Bootstrap support for A3M0I8 as seed ortholog is 100%.

Group of orthologs #482. Best score 524 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:266

G3J3U9              	100.00%		A3GF21              	100.00%
                    	       		A3GGL8              	46.29%
Bootstrap support for G3J3U9 as seed ortholog is 99%.
Bootstrap support for A3GF21 as seed ortholog is 100%.

Group of orthologs #483. Best score 524 bits
Score difference with first non-orthologous sequence - C.militaris:524 S.stipitis:367

G3JCP7              	100.00%		A3GG88              	100.00%
Bootstrap support for G3JCP7 as seed ortholog is 100%.
Bootstrap support for A3GG88 as seed ortholog is 100%.

Group of orthologs #484. Best score 523 bits
Score difference with first non-orthologous sequence - C.militaris:306 S.stipitis:81

G3JIU5              	100.00%		A3LWD0              	100.00%
                    	       		A3LWC9              	63.22%
                    	       		A3M0J5              	9.11%
Bootstrap support for G3JIU5 as seed ortholog is 100%.
Bootstrap support for A3LWD0 as seed ortholog is 95%.

Group of orthologs #485. Best score 523 bits
Score difference with first non-orthologous sequence - C.militaris:523 S.stipitis:523

G3JE65              	100.00%		A3M088              	100.00%
Bootstrap support for G3JE65 as seed ortholog is 100%.
Bootstrap support for A3M088 as seed ortholog is 100%.

Group of orthologs #486. Best score 523 bits
Score difference with first non-orthologous sequence - C.militaris:523 S.stipitis:373

G3JMI1              	100.00%		A3LSS9              	100.00%
Bootstrap support for G3JMI1 as seed ortholog is 100%.
Bootstrap support for A3LSS9 as seed ortholog is 100%.

Group of orthologs #487. Best score 522 bits
Score difference with first non-orthologous sequence - C.militaris:378 S.stipitis:522

G3J2T9              	100.00%		A3GEX9              	100.00%
Bootstrap support for G3J2T9 as seed ortholog is 100%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #488. Best score 521 bits
Score difference with first non-orthologous sequence - C.militaris:521 S.stipitis:521

G3J3C6              	100.00%		A3LS47              	100.00%
Bootstrap support for G3J3C6 as seed ortholog is 100%.
Bootstrap support for A3LS47 as seed ortholog is 100%.

Group of orthologs #489. Best score 520 bits
Score difference with first non-orthologous sequence - C.militaris:520 S.stipitis:520

G3J7X2              	100.00%		A3GHH1              	100.00%
Bootstrap support for G3J7X2 as seed ortholog is 100%.
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #490. Best score 520 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:520

G3JJW6              	100.00%		A3GGG6              	100.00%
Bootstrap support for G3JJW6 as seed ortholog is 100%.
Bootstrap support for A3GGG6 as seed ortholog is 100%.

Group of orthologs #491. Best score 520 bits
Score difference with first non-orthologous sequence - C.militaris:520 S.stipitis:520

G3JCQ3              	100.00%		A3LXE5              	100.00%
Bootstrap support for G3JCQ3 as seed ortholog is 100%.
Bootstrap support for A3LXE5 as seed ortholog is 100%.

Group of orthologs #492. Best score 519 bits
Score difference with first non-orthologous sequence - C.militaris:519 S.stipitis:274

G3J6Q8              	100.00%		A3LNV9              	100.00%
G3JHG1              	25.29%		A3LYG9              	73.36%
Bootstrap support for G3J6Q8 as seed ortholog is 100%.
Bootstrap support for A3LNV9 as seed ortholog is 100%.

Group of orthologs #493. Best score 519 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:519

G3J5T1              	100.00%		A3GG96              	100.00%
Bootstrap support for G3J5T1 as seed ortholog is 100%.
Bootstrap support for A3GG96 as seed ortholog is 100%.

Group of orthologs #494. Best score 519 bits
Score difference with first non-orthologous sequence - C.militaris:519 S.stipitis:519

G3J392              	100.00%		A3LRS6              	100.00%
Bootstrap support for G3J392 as seed ortholog is 100%.
Bootstrap support for A3LRS6 as seed ortholog is 100%.

Group of orthologs #495. Best score 519 bits
Score difference with first non-orthologous sequence - C.militaris:519 S.stipitis:519

G3J723              	100.00%		A3LPS9              	100.00%
Bootstrap support for G3J723 as seed ortholog is 100%.
Bootstrap support for A3LPS9 as seed ortholog is 100%.

Group of orthologs #496. Best score 518 bits
Score difference with first non-orthologous sequence - C.militaris:518 S.stipitis:518

G3J724              	100.00%		A3LSG3              	100.00%
Bootstrap support for G3J724 as seed ortholog is 100%.
Bootstrap support for A3LSG3 as seed ortholog is 100%.

Group of orthologs #497. Best score 518 bits
Score difference with first non-orthologous sequence - C.militaris:518 S.stipitis:518

G3J7P4              	100.00%		A3LZH5              	100.00%
Bootstrap support for G3J7P4 as seed ortholog is 100%.
Bootstrap support for A3LZH5 as seed ortholog is 100%.

Group of orthologs #498. Best score 517 bits
Score difference with first non-orthologous sequence - C.militaris:346 S.stipitis:517

G3JAW1              	100.00%		A3LN86              	100.00%
Bootstrap support for G3JAW1 as seed ortholog is 100%.
Bootstrap support for A3LN86 as seed ortholog is 100%.

Group of orthologs #499. Best score 517 bits
Score difference with first non-orthologous sequence - C.militaris:394 S.stipitis:517

G3JHK8              	100.00%		A3GI75              	100.00%
Bootstrap support for G3JHK8 as seed ortholog is 100%.
Bootstrap support for A3GI75 as seed ortholog is 100%.

Group of orthologs #500. Best score 517 bits
Score difference with first non-orthologous sequence - C.militaris:517 S.stipitis:517

G3JQ95              	100.00%		A3LP78              	100.00%
Bootstrap support for G3JQ95 as seed ortholog is 100%.
Bootstrap support for A3LP78 as seed ortholog is 100%.

Group of orthologs #501. Best score 517 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:101

G3JKU9              	100.00%		A3M0N3              	100.00%
Bootstrap support for G3JKU9 as seed ortholog is 92%.
Bootstrap support for A3M0N3 as seed ortholog is 98%.

Group of orthologs #502. Best score 516 bits
Score difference with first non-orthologous sequence - C.militaris:516 S.stipitis:516

G3JUC1              	100.00%		A3LS57              	100.00%
Bootstrap support for G3JUC1 as seed ortholog is 100%.
Bootstrap support for A3LS57 as seed ortholog is 100%.

Group of orthologs #503. Best score 515 bits
Score difference with first non-orthologous sequence - C.militaris:515 S.stipitis:515

G3J2I8              	100.00%		A3LT27              	100.00%
Bootstrap support for G3J2I8 as seed ortholog is 100%.
Bootstrap support for A3LT27 as seed ortholog is 100%.

Group of orthologs #504. Best score 515 bits
Score difference with first non-orthologous sequence - C.militaris:515 S.stipitis:329

G3JA68              	100.00%		A3LQP0              	100.00%
Bootstrap support for G3JA68 as seed ortholog is 100%.
Bootstrap support for A3LQP0 as seed ortholog is 100%.

Group of orthologs #505. Best score 514 bits
Score difference with first non-orthologous sequence - C.militaris:514 S.stipitis:514

G3JPH6              	100.00%		A3LY71              	100.00%
G3J9N3              	16.63%		
Bootstrap support for G3JPH6 as seed ortholog is 100%.
Bootstrap support for A3LY71 as seed ortholog is 100%.

Group of orthologs #506. Best score 513 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:513

G3J3T9              	100.00%		A3LUE2              	100.00%
Bootstrap support for G3J3T9 as seed ortholog is 87%.
Bootstrap support for A3LUE2 as seed ortholog is 100%.

Group of orthologs #507. Best score 513 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:130

G3JE75              	100.00%		A3LP07              	100.00%
Bootstrap support for G3JE75 as seed ortholog is 100%.
Bootstrap support for A3LP07 as seed ortholog is 99%.

Group of orthologs #508. Best score 513 bits
Score difference with first non-orthologous sequence - C.militaris:347 S.stipitis:347

G3JIU1              	100.00%		A3LYG8              	100.00%
Bootstrap support for G3JIU1 as seed ortholog is 100%.
Bootstrap support for A3LYG8 as seed ortholog is 100%.

Group of orthologs #509. Best score 512 bits
Score difference with first non-orthologous sequence - C.militaris:512 S.stipitis:315

G3JC50              	100.00%		A3LPX3              	100.00%
Bootstrap support for G3JC50 as seed ortholog is 100%.
Bootstrap support for A3LPX3 as seed ortholog is 100%.

Group of orthologs #510. Best score 512 bits
Score difference with first non-orthologous sequence - C.militaris:512 S.stipitis:512

G3JGN6              	100.00%		A3LSB3              	100.00%
Bootstrap support for G3JGN6 as seed ortholog is 100%.
Bootstrap support for A3LSB3 as seed ortholog is 100%.

Group of orthologs #511. Best score 512 bits
Score difference with first non-orthologous sequence - C.militaris:512 S.stipitis:512

G3JSQ8              	100.00%		A3LP90              	100.00%
Bootstrap support for G3JSQ8 as seed ortholog is 100%.
Bootstrap support for A3LP90 as seed ortholog is 100%.

Group of orthologs #512. Best score 511 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:511

G3J3Z4              	100.00%		A3LWI8              	100.00%
Bootstrap support for G3J3Z4 as seed ortholog is 99%.
Bootstrap support for A3LWI8 as seed ortholog is 100%.

Group of orthologs #513. Best score 511 bits
Score difference with first non-orthologous sequence - C.militaris:511 S.stipitis:130

G3JHA8              	100.00%		A3LMX4              	100.00%
Bootstrap support for G3JHA8 as seed ortholog is 100%.
Bootstrap support for A3LMX4 as seed ortholog is 99%.

Group of orthologs #514. Best score 511 bits
Score difference with first non-orthologous sequence - C.militaris:369 S.stipitis:359

G3JKU8              	100.00%		A3LRX2              	100.00%
Bootstrap support for G3JKU8 as seed ortholog is 100%.
Bootstrap support for A3LRX2 as seed ortholog is 100%.

Group of orthologs #515. Best score 510 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:238

G3J2N2              	100.00%		A3M0B9              	100.00%
Bootstrap support for G3J2N2 as seed ortholog is 100%.
Bootstrap support for A3M0B9 as seed ortholog is 100%.

Group of orthologs #516. Best score 510 bits
Score difference with first non-orthologous sequence - C.militaris:510 S.stipitis:431

G3JAR6              	100.00%		A3LVU8              	100.00%
Bootstrap support for G3JAR6 as seed ortholog is 100%.
Bootstrap support for A3LVU8 as seed ortholog is 100%.

Group of orthologs #517. Best score 510 bits
Score difference with first non-orthologous sequence - C.militaris:510 S.stipitis:510

G3JH75              	100.00%		A3LXY7              	100.00%
Bootstrap support for G3JH75 as seed ortholog is 100%.
Bootstrap support for A3LXY7 as seed ortholog is 100%.

Group of orthologs #518. Best score 509 bits
Score difference with first non-orthologous sequence - C.militaris:509 S.stipitis:509

G3J440              	100.00%		A3LY41              	100.00%
Bootstrap support for G3J440 as seed ortholog is 100%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #519. Best score 509 bits
Score difference with first non-orthologous sequence - C.militaris:509 S.stipitis:509

G3JPQ1              	100.00%		A3LQ74              	100.00%
Bootstrap support for G3JPQ1 as seed ortholog is 100%.
Bootstrap support for A3LQ74 as seed ortholog is 100%.

Group of orthologs #520. Best score 509 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:127

G3JRL9              	100.00%		A3LRB7              	100.00%
Bootstrap support for G3JRL9 as seed ortholog is 99%.
Bootstrap support for A3LRB7 as seed ortholog is 99%.

Group of orthologs #521. Best score 509 bits
Score difference with first non-orthologous sequence - C.militaris:413 S.stipitis:436

G3JL53              	100.00%		A3LYL8              	100.00%
Bootstrap support for G3JL53 as seed ortholog is 100%.
Bootstrap support for A3LYL8 as seed ortholog is 100%.

Group of orthologs #522. Best score 508 bits
Score difference with first non-orthologous sequence - C.militaris:331 S.stipitis:102

G3J4X5              	100.00%		A3LYX1              	100.00%
G3JUU6              	24.88%		
Bootstrap support for G3J4X5 as seed ortholog is 100%.
Bootstrap support for A3LYX1 as seed ortholog is 97%.

Group of orthologs #523. Best score 508 bits
Score difference with first non-orthologous sequence - C.militaris:508 S.stipitis:446

G3J4J1              	100.00%		A3LPS0              	100.00%
Bootstrap support for G3J4J1 as seed ortholog is 100%.
Bootstrap support for A3LPS0 as seed ortholog is 100%.

Group of orthologs #524. Best score 508 bits
Score difference with first non-orthologous sequence - C.militaris:508 S.stipitis:508

G3J484              	100.00%		A3LVF1              	100.00%
Bootstrap support for G3J484 as seed ortholog is 100%.
Bootstrap support for A3LVF1 as seed ortholog is 100%.

Group of orthologs #525. Best score 508 bits
Score difference with first non-orthologous sequence - C.militaris:508 S.stipitis:508

G3JIC7              	100.00%		A3LN55              	100.00%
Bootstrap support for G3JIC7 as seed ortholog is 100%.
Bootstrap support for A3LN55 as seed ortholog is 100%.

Group of orthologs #526. Best score 507 bits
Score difference with first non-orthologous sequence - C.militaris:507 S.stipitis:507

G3J9E8              	100.00%		A3LVQ0              	100.00%
Bootstrap support for G3J9E8 as seed ortholog is 100%.
Bootstrap support for A3LVQ0 as seed ortholog is 100%.

Group of orthologs #527. Best score 505 bits
Score difference with first non-orthologous sequence - C.militaris:303 S.stipitis:405

G3JB89              	100.00%		A3GHH4              	100.00%
Bootstrap support for G3JB89 as seed ortholog is 100%.
Bootstrap support for A3GHH4 as seed ortholog is 100%.

Group of orthologs #528. Best score 505 bits
Score difference with first non-orthologous sequence - C.militaris:505 S.stipitis:505

G3JF26              	100.00%		A3GGN0              	100.00%
Bootstrap support for G3JF26 as seed ortholog is 100%.
Bootstrap support for A3GGN0 as seed ortholog is 100%.

Group of orthologs #529. Best score 505 bits
Score difference with first non-orthologous sequence - C.militaris:505 S.stipitis:505

G3J3W0              	100.00%		A3LX86              	100.00%
Bootstrap support for G3J3W0 as seed ortholog is 100%.
Bootstrap support for A3LX86 as seed ortholog is 100%.

Group of orthologs #530. Best score 505 bits
Score difference with first non-orthologous sequence - C.militaris:320 S.stipitis:342

G3JA08              	100.00%		A3LYG4              	100.00%
Bootstrap support for G3JA08 as seed ortholog is 100%.
Bootstrap support for A3LYG4 as seed ortholog is 100%.

Group of orthologs #531. Best score 505 bits
Score difference with first non-orthologous sequence - C.militaris:505 S.stipitis:505

G3JNE0              	100.00%		A3GGH7              	100.00%
Bootstrap support for G3JNE0 as seed ortholog is 100%.
Bootstrap support for A3GGH7 as seed ortholog is 100%.

Group of orthologs #532. Best score 504 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:504

G3JGE0              	100.00%		A3LS16              	100.00%
Bootstrap support for G3JGE0 as seed ortholog is 99%.
Bootstrap support for A3LS16 as seed ortholog is 100%.

Group of orthologs #533. Best score 504 bits
Score difference with first non-orthologous sequence - C.militaris:445 S.stipitis:392

G3JMI0              	100.00%		A3GH58              	100.00%
Bootstrap support for G3JMI0 as seed ortholog is 100%.
Bootstrap support for A3GH58 as seed ortholog is 100%.

Group of orthologs #534. Best score 503 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:423

G3JAU5              	100.00%		A3LPL1              	100.00%
G3JTX8              	7.30%		
Bootstrap support for G3JAU5 as seed ortholog is 53%.
Alternative seed ortholog is G3JHU5 (104 bits away from this cluster)
Bootstrap support for A3LPL1 as seed ortholog is 100%.

Group of orthologs #535. Best score 503 bits
Score difference with first non-orthologous sequence - C.militaris:503 S.stipitis:503

G3JHJ0              	100.00%		A3M026              	100.00%
                    	       		A3LRE0              	30.16%
Bootstrap support for G3JHJ0 as seed ortholog is 100%.
Bootstrap support for A3M026 as seed ortholog is 100%.

Group of orthologs #536. Best score 503 bits
Score difference with first non-orthologous sequence - C.militaris:248 S.stipitis:377

G3J980              	100.00%		A3LRD5              	100.00%
Bootstrap support for G3J980 as seed ortholog is 100%.
Bootstrap support for A3LRD5 as seed ortholog is 100%.

Group of orthologs #537. Best score 502 bits
Score difference with first non-orthologous sequence - C.militaris:139 S.stipitis:108

G3JS05              	100.00%		A3LNM2              	100.00%
G3JPY7              	8.81%		A3LUP4              	81.64%
                    	       		A3LXA3              	74.78%
                    	       		A3LWN4              	71.34%
Bootstrap support for G3JS05 as seed ortholog is 99%.
Bootstrap support for A3LNM2 as seed ortholog is 99%.

Group of orthologs #538. Best score 502 bits
Score difference with first non-orthologous sequence - C.militaris:502 S.stipitis:502

G3JQM4              	100.00%		A3LTA3              	100.00%
Bootstrap support for G3JQM4 as seed ortholog is 100%.
Bootstrap support for A3LTA3 as seed ortholog is 100%.

Group of orthologs #539. Best score 501 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:501

G3J3S8              	100.00%		A3LX62              	100.00%
Bootstrap support for G3J3S8 as seed ortholog is 100%.
Bootstrap support for A3LX62 as seed ortholog is 100%.

Group of orthologs #540. Best score 501 bits
Score difference with first non-orthologous sequence - C.militaris:501 S.stipitis:501

G3JD95              	100.00%		A3LUE7              	100.00%
Bootstrap support for G3JD95 as seed ortholog is 100%.
Bootstrap support for A3LUE7 as seed ortholog is 100%.

Group of orthologs #541. Best score 501 bits
Score difference with first non-orthologous sequence - C.militaris:501 S.stipitis:459

G3JQJ1              	100.00%		A3LNR3              	100.00%
Bootstrap support for G3JQJ1 as seed ortholog is 100%.
Bootstrap support for A3LNR3 as seed ortholog is 100%.

Group of orthologs #542. Best score 500 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:500

G3JTC8              	100.00%		A3LU76              	100.00%
G3JEG9              	20.16%		A3LVK0              	34.41%
Bootstrap support for G3JTC8 as seed ortholog is 99%.
Bootstrap support for A3LU76 as seed ortholog is 100%.

Group of orthologs #543. Best score 500 bits
Score difference with first non-orthologous sequence - C.militaris:500 S.stipitis:223

G3JA96              	100.00%		A3LQC4              	100.00%
Bootstrap support for G3JA96 as seed ortholog is 100%.
Bootstrap support for A3LQC4 as seed ortholog is 100%.

Group of orthologs #544. Best score 499 bits
Score difference with first non-orthologous sequence - C.militaris:499 S.stipitis:56

G3JDC6              	100.00%		A3LR17              	100.00%
G3JQS0              	21.63%		
Bootstrap support for G3JDC6 as seed ortholog is 100%.
Bootstrap support for A3LR17 as seed ortholog is 89%.

Group of orthologs #545. Best score 499 bits
Score difference with first non-orthologous sequence - C.militaris:401 S.stipitis:499

G3JDN8              	100.00%		A3LSY2              	100.00%
Bootstrap support for G3JDN8 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #546. Best score 499 bits
Score difference with first non-orthologous sequence - C.militaris:499 S.stipitis:499

G3JJF0              	100.00%		A3LUK5              	100.00%
Bootstrap support for G3JJF0 as seed ortholog is 100%.
Bootstrap support for A3LUK5 as seed ortholog is 100%.

Group of orthologs #547. Best score 498 bits
Score difference with first non-orthologous sequence - C.militaris:498 S.stipitis:498

G3JH04              	100.00%		A3LTF5              	100.00%
Bootstrap support for G3JH04 as seed ortholog is 100%.
Bootstrap support for A3LTF5 as seed ortholog is 100%.

Group of orthologs #548. Best score 498 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:498

G3JSY5              	100.00%		A3LP98              	100.00%
Bootstrap support for G3JSY5 as seed ortholog is 100%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #549. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:497 S.stipitis:497

G3J8W8              	100.00%		A3GF78              	100.00%
Bootstrap support for G3J8W8 as seed ortholog is 100%.
Bootstrap support for A3GF78 as seed ortholog is 100%.

Group of orthologs #550. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:497

G3J6Y8              	100.00%		A3LTS9              	100.00%
Bootstrap support for G3J6Y8 as seed ortholog is 100%.
Bootstrap support for A3LTS9 as seed ortholog is 100%.

Group of orthologs #551. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:301 S.stipitis:497

G3JE16              	100.00%		A3LP00              	100.00%
Bootstrap support for G3JE16 as seed ortholog is 100%.
Bootstrap support for A3LP00 as seed ortholog is 100%.

Group of orthologs #552. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:263 S.stipitis:349

G3JIT4              	100.00%		A3LQR4              	100.00%
Bootstrap support for G3JIT4 as seed ortholog is 100%.
Bootstrap support for A3LQR4 as seed ortholog is 100%.

Group of orthologs #553. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:497 S.stipitis:497

G3JMS8              	100.00%		A3LVG7              	100.00%
Bootstrap support for G3JMS8 as seed ortholog is 100%.
Bootstrap support for A3LVG7 as seed ortholog is 100%.

Group of orthologs #554. Best score 496 bits
Score difference with first non-orthologous sequence - C.militaris:427 S.stipitis:296

G3J895              	100.00%		A3LXE1              	100.00%
Bootstrap support for G3J895 as seed ortholog is 100%.
Bootstrap support for A3LXE1 as seed ortholog is 100%.

Group of orthologs #555. Best score 496 bits
Score difference with first non-orthologous sequence - C.militaris:496 S.stipitis:496

G3JF38              	100.00%		A3LRV8              	100.00%
Bootstrap support for G3JF38 as seed ortholog is 100%.
Bootstrap support for A3LRV8 as seed ortholog is 100%.

Group of orthologs #556. Best score 495 bits
Score difference with first non-orthologous sequence - C.militaris:495 S.stipitis:495

G3J808              	100.00%		A3LY39              	100.00%
G3JBJ8              	6.39%		
Bootstrap support for G3J808 as seed ortholog is 100%.
Bootstrap support for A3LY39 as seed ortholog is 100%.

Group of orthologs #557. Best score 495 bits
Score difference with first non-orthologous sequence - C.militaris:495 S.stipitis:495

G3JQB0              	100.00%		A3LPA3              	100.00%
G3JT24              	9.41%		
Bootstrap support for G3JQB0 as seed ortholog is 100%.
Bootstrap support for A3LPA3 as seed ortholog is 100%.

Group of orthologs #558. Best score 495 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:495

G3JBM3              	100.00%		A3LVY1              	100.00%
Bootstrap support for G3JBM3 as seed ortholog is 100%.
Bootstrap support for A3LVY1 as seed ortholog is 100%.

Group of orthologs #559. Best score 495 bits
Score difference with first non-orthologous sequence - C.militaris:316 S.stipitis:495

G3JLL6              	100.00%		A3LSH7              	100.00%
Bootstrap support for G3JLL6 as seed ortholog is 100%.
Bootstrap support for A3LSH7 as seed ortholog is 100%.

Group of orthologs #560. Best score 495 bits
Score difference with first non-orthologous sequence - C.militaris:495 S.stipitis:495

G3JUV9              	100.00%		A3GG46              	100.00%
Bootstrap support for G3JUV9 as seed ortholog is 100%.
Bootstrap support for A3GG46 as seed ortholog is 100%.

Group of orthologs #561. Best score 494 bits
Score difference with first non-orthologous sequence - C.militaris:198 S.stipitis:142

G3J3Q9              	100.00%		A3LU43              	100.00%
Bootstrap support for G3J3Q9 as seed ortholog is 100%.
Bootstrap support for A3LU43 as seed ortholog is 99%.

Group of orthologs #562. Best score 494 bits
Score difference with first non-orthologous sequence - C.militaris:494 S.stipitis:494

G3JUP4              	100.00%		A3GGL5              	100.00%
Bootstrap support for G3JUP4 as seed ortholog is 100%.
Bootstrap support for A3GGL5 as seed ortholog is 100%.

Group of orthologs #563. Best score 494 bits
Score difference with first non-orthologous sequence - C.militaris:494 S.stipitis:198

G3JTR1              	100.00%		A3LR48              	100.00%
Bootstrap support for G3JTR1 as seed ortholog is 100%.
Bootstrap support for A3LR48 as seed ortholog is 99%.

Group of orthologs #564. Best score 493 bits
Score difference with first non-orthologous sequence - C.militaris:493 S.stipitis:493

G3JEN9              	100.00%		A3LWM9              	100.00%
Bootstrap support for G3JEN9 as seed ortholog is 100%.
Bootstrap support for A3LWM9 as seed ortholog is 100%.

Group of orthologs #565. Best score 492 bits
Score difference with first non-orthologous sequence - C.militaris:492 S.stipitis:492

G3J372              	100.00%		A3GHC7              	100.00%
Bootstrap support for G3J372 as seed ortholog is 100%.
Bootstrap support for A3GHC7 as seed ortholog is 100%.

Group of orthologs #566. Best score 492 bits
Score difference with first non-orthologous sequence - C.militaris:492 S.stipitis:492

G3JCF0              	100.00%		A3GFT0              	100.00%
Bootstrap support for G3JCF0 as seed ortholog is 100%.
Bootstrap support for A3GFT0 as seed ortholog is 100%.

Group of orthologs #567. Best score 492 bits
Score difference with first non-orthologous sequence - C.militaris:492 S.stipitis:492

G3J8A7              	100.00%		A3LUK4              	100.00%
Bootstrap support for G3J8A7 as seed ortholog is 100%.
Bootstrap support for A3LUK4 as seed ortholog is 100%.

Group of orthologs #568. Best score 492 bits
Score difference with first non-orthologous sequence - C.militaris:492 S.stipitis:368

G3JJ54              	100.00%		A3LTF4              	100.00%
Bootstrap support for G3JJ54 as seed ortholog is 100%.
Bootstrap support for A3LTF4 as seed ortholog is 100%.

Group of orthologs #569. Best score 492 bits
Score difference with first non-orthologous sequence - C.militaris:492 S.stipitis:492

G3JFG3              	100.00%		A3LY74              	100.00%
Bootstrap support for G3JFG3 as seed ortholog is 100%.
Bootstrap support for A3LY74 as seed ortholog is 100%.

Group of orthologs #570. Best score 491 bits
Score difference with first non-orthologous sequence - C.militaris:491 S.stipitis:491

G3J4C3              	100.00%		A3GHZ9              	100.00%
Bootstrap support for G3J4C3 as seed ortholog is 100%.
Bootstrap support for A3GHZ9 as seed ortholog is 100%.

Group of orthologs #571. Best score 490 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:490

G3J864              	100.00%		A3LNX2              	100.00%
                    	       		A3LNX1              	63.76%
Bootstrap support for G3J864 as seed ortholog is 98%.
Bootstrap support for A3LNX2 as seed ortholog is 100%.

Group of orthologs #572. Best score 490 bits
Score difference with first non-orthologous sequence - C.militaris:490 S.stipitis:490

G3JH67              	100.00%		A3GG07              	100.00%
Bootstrap support for G3JH67 as seed ortholog is 100%.
Bootstrap support for A3GG07 as seed ortholog is 100%.

Group of orthologs #573. Best score 489 bits
Score difference with first non-orthologous sequence - C.militaris:489 S.stipitis:489

G3JMC6              	100.00%		A3GI41              	100.00%
Bootstrap support for G3JMC6 as seed ortholog is 100%.
Bootstrap support for A3GI41 as seed ortholog is 100%.

Group of orthologs #574. Best score 488 bits
Score difference with first non-orthologous sequence - C.militaris:488 S.stipitis:488

G3J5A8              	100.00%		A3LWK4              	100.00%
Bootstrap support for G3J5A8 as seed ortholog is 100%.
Bootstrap support for A3LWK4 as seed ortholog is 100%.

Group of orthologs #575. Best score 488 bits
Score difference with first non-orthologous sequence - C.militaris:488 S.stipitis:488

G3JFJ7              	100.00%		A3LRD7              	100.00%
Bootstrap support for G3JFJ7 as seed ortholog is 100%.
Bootstrap support for A3LRD7 as seed ortholog is 100%.

Group of orthologs #576. Best score 488 bits
Score difference with first non-orthologous sequence - C.militaris:488 S.stipitis:488

G3JQ98              	100.00%		A3LTF8              	100.00%
Bootstrap support for G3JQ98 as seed ortholog is 100%.
Bootstrap support for A3LTF8 as seed ortholog is 100%.

Group of orthologs #577. Best score 487 bits
Score difference with first non-orthologous sequence - C.militaris:487 S.stipitis:487

G3JEF1              	100.00%		A3LWP1              	100.00%
Bootstrap support for G3JEF1 as seed ortholog is 100%.
Bootstrap support for A3LWP1 as seed ortholog is 100%.

Group of orthologs #578. Best score 486 bits
Score difference with first non-orthologous sequence - C.militaris:360 S.stipitis:486

G3JCR7              	100.00%		A3LMX1              	100.00%
Bootstrap support for G3JCR7 as seed ortholog is 100%.
Bootstrap support for A3LMX1 as seed ortholog is 100%.

Group of orthologs #579. Best score 485 bits
Score difference with first non-orthologous sequence - C.militaris:485 S.stipitis:485

G3JBL5              	100.00%		A3LYM1              	100.00%
Bootstrap support for G3JBL5 as seed ortholog is 100%.
Bootstrap support for A3LYM1 as seed ortholog is 100%.

Group of orthologs #580. Best score 485 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:485

G3JUA8              	100.00%		A3GHE2              	100.00%
Bootstrap support for G3JUA8 as seed ortholog is 100%.
Bootstrap support for A3GHE2 as seed ortholog is 100%.

Group of orthologs #581. Best score 485 bits
Score difference with first non-orthologous sequence - C.militaris:485 S.stipitis:485

G3JNM6              	100.00%		A3M037              	100.00%
Bootstrap support for G3JNM6 as seed ortholog is 100%.
Bootstrap support for A3M037 as seed ortholog is 100%.

Group of orthologs #582. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:483 S.stipitis:483

G3JH61              	100.00%		A3LUL0              	100.00%
Bootstrap support for G3JH61 as seed ortholog is 100%.
Bootstrap support for A3LUL0 as seed ortholog is 100%.

Group of orthologs #583. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:483 S.stipitis:483

G3JET5              	100.00%		A3LYR6              	100.00%
Bootstrap support for G3JET5 as seed ortholog is 100%.
Bootstrap support for A3LYR6 as seed ortholog is 100%.

Group of orthologs #584. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:249

G3JMJ5              	100.00%		A3LR12              	100.00%
Bootstrap support for G3JMJ5 as seed ortholog is 99%.
Bootstrap support for A3LR12 as seed ortholog is 99%.

Group of orthologs #585. Best score 482 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:294

G3J7F3              	100.00%		A3LYD5              	100.00%
                    	       		A3LPK9              	17.08%
Bootstrap support for G3J7F3 as seed ortholog is 100%.
Bootstrap support for A3LYD5 as seed ortholog is 100%.

Group of orthologs #586. Best score 482 bits
Score difference with first non-orthologous sequence - C.militaris:482 S.stipitis:131

G3J5S1              	100.00%		A3GG17              	100.00%
Bootstrap support for G3J5S1 as seed ortholog is 100%.
Bootstrap support for A3GG17 as seed ortholog is 99%.

Group of orthologs #587. Best score 480 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:480

G3JIG0              	100.00%		A3LVY5              	100.00%
G3JAT0              	18.64%		
Bootstrap support for G3JIG0 as seed ortholog is 98%.
Bootstrap support for A3LVY5 as seed ortholog is 100%.

Group of orthologs #588. Best score 480 bits
Score difference with first non-orthologous sequence - C.militaris:480 S.stipitis:480

G3J3E0              	100.00%		A3GI67              	100.00%
Bootstrap support for G3J3E0 as seed ortholog is 100%.
Bootstrap support for A3GI67 as seed ortholog is 100%.

Group of orthologs #589. Best score 480 bits
Score difference with first non-orthologous sequence - C.militaris:480 S.stipitis:480

G3J2R7              	100.00%		A3LPY6              	100.00%
Bootstrap support for G3J2R7 as seed ortholog is 100%.
Bootstrap support for A3LPY6 as seed ortholog is 100%.

Group of orthologs #590. Best score 480 bits
Score difference with first non-orthologous sequence - C.militaris:480 S.stipitis:344

G3JSB7              	100.00%		A3GHN1              	100.00%
Bootstrap support for G3JSB7 as seed ortholog is 100%.
Bootstrap support for A3GHN1 as seed ortholog is 100%.

Group of orthologs #591. Best score 480 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:256

G3JQW3              	100.00%		A3LUB4              	100.00%
Bootstrap support for G3JQW3 as seed ortholog is 99%.
Bootstrap support for A3LUB4 as seed ortholog is 100%.

Group of orthologs #592. Best score 480 bits
Score difference with first non-orthologous sequence - C.militaris:480 S.stipitis:480

G3JQQ0              	100.00%		A3LZQ9              	100.00%
Bootstrap support for G3JQQ0 as seed ortholog is 100%.
Bootstrap support for A3LZQ9 as seed ortholog is 100%.

Group of orthologs #593. Best score 479 bits
Score difference with first non-orthologous sequence - C.militaris:479 S.stipitis:479

G3JCW8              	100.00%		A3LS68              	100.00%
Bootstrap support for G3JCW8 as seed ortholog is 100%.
Bootstrap support for A3LS68 as seed ortholog is 100%.

Group of orthologs #594. Best score 479 bits
Score difference with first non-orthologous sequence - C.militaris:479 S.stipitis:198

G3JJK6              	100.00%		A3LUG7              	100.00%
Bootstrap support for G3JJK6 as seed ortholog is 100%.
Bootstrap support for A3LUG7 as seed ortholog is 100%.

Group of orthologs #595. Best score 478 bits
Score difference with first non-orthologous sequence - C.militaris:478 S.stipitis:478

G3J6S0              	100.00%		A3LU56              	100.00%
Bootstrap support for G3J6S0 as seed ortholog is 100%.
Bootstrap support for A3LU56 as seed ortholog is 100%.

Group of orthologs #596. Best score 478 bits
Score difference with first non-orthologous sequence - C.militaris:478 S.stipitis:478

G3JA52              	100.00%		A3LV82              	100.00%
Bootstrap support for G3JA52 as seed ortholog is 100%.
Bootstrap support for A3LV82 as seed ortholog is 100%.

Group of orthologs #597. Best score 478 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:478

G3JHM4              	100.00%		A3LTW8              	100.00%
Bootstrap support for G3JHM4 as seed ortholog is 100%.
Bootstrap support for A3LTW8 as seed ortholog is 100%.

Group of orthologs #598. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:477 S.stipitis:477

G3JG05              	100.00%		A3LQI7              	100.00%
                    	       		A3LRX6              	25.21%
Bootstrap support for G3JG05 as seed ortholog is 100%.
Bootstrap support for A3LQI7 as seed ortholog is 100%.

Group of orthologs #599. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:380 S.stipitis:477

G3J8I7              	100.00%		A3M028              	100.00%
                    	       		A3M029              	64.03%
Bootstrap support for G3J8I7 as seed ortholog is 100%.
Bootstrap support for A3M028 as seed ortholog is 100%.

Group of orthologs #600. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:347

G3J337              	100.00%		A3LXR2              	100.00%
Bootstrap support for G3J337 as seed ortholog is 99%.
Bootstrap support for A3LXR2 as seed ortholog is 100%.

Group of orthologs #601. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:393 S.stipitis:27

G3JDQ5              	100.00%		A3GID5              	100.00%
Bootstrap support for G3JDQ5 as seed ortholog is 100%.
Bootstrap support for A3GID5 as seed ortholog is 83%.

Group of orthologs #602. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:477 S.stipitis:477

G3JHJ8              	100.00%		A3LP54              	100.00%
Bootstrap support for G3JHJ8 as seed ortholog is 100%.
Bootstrap support for A3LP54 as seed ortholog is 100%.

Group of orthologs #603. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:307 S.stipitis:477

G3JIB1              	100.00%		A3M0H4              	100.00%
Bootstrap support for G3JIB1 as seed ortholog is 100%.
Bootstrap support for A3M0H4 as seed ortholog is 100%.

Group of orthologs #604. Best score 476 bits
Score difference with first non-orthologous sequence - C.militaris:476 S.stipitis:476

G3JBW3              	100.00%		A3LQF5              	100.00%
Bootstrap support for G3JBW3 as seed ortholog is 100%.
Bootstrap support for A3LQF5 as seed ortholog is 100%.

Group of orthologs #605. Best score 476 bits
Score difference with first non-orthologous sequence - C.militaris:476 S.stipitis:476

G3JFG0              	100.00%		A3LPT6              	100.00%
Bootstrap support for G3JFG0 as seed ortholog is 100%.
Bootstrap support for A3LPT6 as seed ortholog is 100%.

Group of orthologs #606. Best score 476 bits
Score difference with first non-orthologous sequence - C.militaris:476 S.stipitis:476

G3JM96              	100.00%		A3LYT4              	100.00%
Bootstrap support for G3JM96 as seed ortholog is 100%.
Bootstrap support for A3LYT4 as seed ortholog is 100%.

Group of orthologs #607. Best score 476 bits
Score difference with first non-orthologous sequence - C.militaris:26 S.stipitis:476

G3JS81              	100.00%		A3LY69              	100.00%
Bootstrap support for G3JS81 as seed ortholog is 73%.
Alternative seed ortholog is G3J7Q7 (26 bits away from this cluster)
Bootstrap support for A3LY69 as seed ortholog is 100%.

Group of orthologs #608. Best score 475 bits
Score difference with first non-orthologous sequence - C.militaris:322 S.stipitis:475

G3J655              	100.00%		A3LYS8              	100.00%
Bootstrap support for G3J655 as seed ortholog is 100%.
Bootstrap support for A3LYS8 as seed ortholog is 100%.

Group of orthologs #609. Best score 475 bits
Score difference with first non-orthologous sequence - C.militaris:475 S.stipitis:100

G3JMP6              	100.00%		A3LSW5              	100.00%
Bootstrap support for G3JMP6 as seed ortholog is 100%.
Bootstrap support for A3LSW5 as seed ortholog is 94%.

Group of orthologs #610. Best score 475 bits
Score difference with first non-orthologous sequence - C.militaris:386 S.stipitis:123

G3JU03              	100.00%		A3LQD3              	100.00%
Bootstrap support for G3JU03 as seed ortholog is 100%.
Bootstrap support for A3LQD3 as seed ortholog is 98%.

Group of orthologs #611. Best score 474 bits
Score difference with first non-orthologous sequence - C.militaris:474 S.stipitis:474

G3JLP5              	100.00%		A3GI60              	100.00%
Bootstrap support for G3JLP5 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 100%.

Group of orthologs #612. Best score 474 bits
Score difference with first non-orthologous sequence - C.militaris:474 S.stipitis:474

G3JH86              	100.00%		A3LZ97              	100.00%
Bootstrap support for G3JH86 as seed ortholog is 100%.
Bootstrap support for A3LZ97 as seed ortholog is 100%.

Group of orthologs #613. Best score 473 bits
Score difference with first non-orthologous sequence - C.militaris:473 S.stipitis:473

G3J9K3              	100.00%		A3GH36              	100.00%
Bootstrap support for G3J9K3 as seed ortholog is 100%.
Bootstrap support for A3GH36 as seed ortholog is 100%.

Group of orthologs #614. Best score 473 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:473

G3JKX6              	100.00%		A3LYS9              	100.00%
Bootstrap support for G3JKX6 as seed ortholog is 97%.
Bootstrap support for A3LYS9 as seed ortholog is 100%.

Group of orthologs #615. Best score 473 bits
Score difference with first non-orthologous sequence - C.militaris:473 S.stipitis:287

G3JT32              	100.00%		A3LSR0              	100.00%
Bootstrap support for G3JT32 as seed ortholog is 100%.
Bootstrap support for A3LSR0 as seed ortholog is 100%.

Group of orthologs #616. Best score 472 bits
Score difference with first non-orthologous sequence - C.militaris:335 S.stipitis:472

G3J3S3              	100.00%		A3LYY4              	100.00%
Bootstrap support for G3J3S3 as seed ortholog is 100%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #617. Best score 472 bits
Score difference with first non-orthologous sequence - C.militaris:472 S.stipitis:357

G3JQJ6              	100.00%		A3LQ03              	100.00%
Bootstrap support for G3JQJ6 as seed ortholog is 100%.
Bootstrap support for A3LQ03 as seed ortholog is 100%.

Group of orthologs #618. Best score 472 bits
Score difference with first non-orthologous sequence - C.militaris:472 S.stipitis:472

G3JRK9              	100.00%		A3LYM2              	100.00%
Bootstrap support for G3JRK9 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #619. Best score 471 bits
Score difference with first non-orthologous sequence - C.militaris:471 S.stipitis:471

G3JGJ1              	100.00%		A3GGE7              	100.00%
Bootstrap support for G3JGJ1 as seed ortholog is 100%.
Bootstrap support for A3GGE7 as seed ortholog is 100%.

Group of orthologs #620. Best score 470 bits
Score difference with first non-orthologous sequence - C.militaris:261 S.stipitis:470

G3JGB8              	100.00%		A3LRZ8              	100.00%
Bootstrap support for G3JGB8 as seed ortholog is 99%.
Bootstrap support for A3LRZ8 as seed ortholog is 100%.

Group of orthologs #621. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:469 S.stipitis:469

G3JKI0              	100.00%		A3LTM0              	100.00%
G3JUU2              	54.04%		
Bootstrap support for G3JKI0 as seed ortholog is 100%.
Bootstrap support for A3LTM0 as seed ortholog is 100%.

Group of orthologs #622. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:469 S.stipitis:469

G3J341              	100.00%		A3LPA1              	100.00%
Bootstrap support for G3J341 as seed ortholog is 100%.
Bootstrap support for A3LPA1 as seed ortholog is 100%.

Group of orthologs #623. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:469 S.stipitis:469

G3J2Z5              	100.00%		A3LPP7              	100.00%
Bootstrap support for G3J2Z5 as seed ortholog is 100%.
Bootstrap support for A3LPP7 as seed ortholog is 100%.

Group of orthologs #624. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:295 S.stipitis:93

G3JF14              	100.00%		A3LSY7              	100.00%
Bootstrap support for G3JF14 as seed ortholog is 100%.
Bootstrap support for A3LSY7 as seed ortholog is 95%.

Group of orthologs #625. Best score 468 bits
Score difference with first non-orthologous sequence - C.militaris:468 S.stipitis:468

G3JFU3              	100.00%		A3LQ70              	100.00%
                    	       		A3LZZ7              	47.15%
                    	       		A3LNP7              	40.93%
Bootstrap support for G3JFU3 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #626. Best score 468 bits
Score difference with first non-orthologous sequence - C.militaris:468 S.stipitis:468

G3J4K4              	100.00%		A3LP39              	100.00%
Bootstrap support for G3J4K4 as seed ortholog is 100%.
Bootstrap support for A3LP39 as seed ortholog is 100%.

Group of orthologs #627. Best score 468 bits
Score difference with first non-orthologous sequence - C.militaris:468 S.stipitis:468

G3JGE7              	100.00%		A3LS33              	100.00%
Bootstrap support for G3JGE7 as seed ortholog is 100%.
Bootstrap support for A3LS33 as seed ortholog is 100%.

Group of orthologs #628. Best score 468 bits
Score difference with first non-orthologous sequence - C.militaris:468 S.stipitis:44

G3JGB6              	100.00%		A3LYD2              	100.00%
Bootstrap support for G3JGB6 as seed ortholog is 100%.
Bootstrap support for A3LYD2 as seed ortholog is 84%.

Group of orthologs #629. Best score 468 bits
Score difference with first non-orthologous sequence - C.militaris:338 S.stipitis:355

G3JGS6              	100.00%		A3LYI5              	100.00%
Bootstrap support for G3JGS6 as seed ortholog is 100%.
Bootstrap support for A3LYI5 as seed ortholog is 100%.

Group of orthologs #630. Best score 467 bits
Score difference with first non-orthologous sequence - C.militaris:467 S.stipitis:467

G3JHE3              	100.00%		A3GHY8              	100.00%
Bootstrap support for G3JHE3 as seed ortholog is 100%.
Bootstrap support for A3GHY8 as seed ortholog is 100%.

Group of orthologs #631. Best score 467 bits
Score difference with first non-orthologous sequence - C.militaris:467 S.stipitis:467

G3JJN2              	100.00%		A3LVQ3              	100.00%
Bootstrap support for G3JJN2 as seed ortholog is 100%.
Bootstrap support for A3LVQ3 as seed ortholog is 100%.

Group of orthologs #632. Best score 466 bits
Score difference with first non-orthologous sequence - C.militaris:466 S.stipitis:320

G3JN56              	100.00%		A3LX33              	100.00%
Bootstrap support for G3JN56 as seed ortholog is 100%.
Bootstrap support for A3LX33 as seed ortholog is 100%.

Group of orthologs #633. Best score 465 bits
Score difference with first non-orthologous sequence - C.militaris:396 S.stipitis:364

G3J303              	100.00%		A3LZD4              	100.00%
                    	       		A3LUG5              	49.63%
Bootstrap support for G3J303 as seed ortholog is 100%.
Bootstrap support for A3LZD4 as seed ortholog is 100%.

Group of orthologs #634. Best score 465 bits
Score difference with first non-orthologous sequence - C.militaris:299 S.stipitis:465

G3J7R4              	100.00%		A3LYZ8              	100.00%
Bootstrap support for G3J7R4 as seed ortholog is 100%.
Bootstrap support for A3LYZ8 as seed ortholog is 100%.

Group of orthologs #635. Best score 465 bits
Score difference with first non-orthologous sequence - C.militaris:465 S.stipitis:465

G3JS46              	100.00%		A3LWX2              	100.00%
Bootstrap support for G3JS46 as seed ortholog is 100%.
Bootstrap support for A3LWX2 as seed ortholog is 100%.

Group of orthologs #636. Best score 464 bits
Score difference with first non-orthologous sequence - C.militaris:464 S.stipitis:464

G3JP16              	100.00%		A3LXS9              	100.00%
G3JSH8              	33.93%		
Bootstrap support for G3JP16 as seed ortholog is 100%.
Bootstrap support for A3LXS9 as seed ortholog is 100%.

Group of orthologs #637. Best score 464 bits
Score difference with first non-orthologous sequence - C.militaris:464 S.stipitis:464

G3J8B9              	100.00%		A3LS75              	100.00%
Bootstrap support for G3J8B9 as seed ortholog is 100%.
Bootstrap support for A3LS75 as seed ortholog is 100%.

Group of orthologs #638. Best score 464 bits
Score difference with first non-orthologous sequence - C.militaris:392 S.stipitis:323

G3JBD1              	100.00%		A3LXZ7              	100.00%
Bootstrap support for G3JBD1 as seed ortholog is 100%.
Bootstrap support for A3LXZ7 as seed ortholog is 100%.

Group of orthologs #639. Best score 463 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:463

G3JGP7              	100.00%		A3LVU4              	100.00%
                    	       		A3LNY1              	37.98%
Bootstrap support for G3JGP7 as seed ortholog is 100%.
Bootstrap support for A3LVU4 as seed ortholog is 100%.

Group of orthologs #640. Best score 463 bits
Score difference with first non-orthologous sequence - C.militaris:463 S.stipitis:463

G3J5X8              	100.00%		A3GH90              	100.00%
Bootstrap support for G3J5X8 as seed ortholog is 100%.
Bootstrap support for A3GH90 as seed ortholog is 100%.

Group of orthologs #641. Best score 463 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:174

G3JC37              	100.00%		A3LP28              	100.00%
Bootstrap support for G3JC37 as seed ortholog is 99%.
Bootstrap support for A3LP28 as seed ortholog is 99%.

Group of orthologs #642. Best score 462 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:462

G3JSN0              	100.00%		A3GGL3              	100.00%
G3JRT7              	14.43%		
Bootstrap support for G3JSN0 as seed ortholog is 97%.
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #643. Best score 461 bits
Score difference with first non-orthologous sequence - C.militaris:386 S.stipitis:141

G3JCG6              	100.00%		A3LS18              	100.00%
G3J711              	20.12%		A3LYJ0              	22.37%
                    	       		A3LQB5              	21.65%
                    	       		A3LN39              	13.28%
Bootstrap support for G3JCG6 as seed ortholog is 100%.
Bootstrap support for A3LS18 as seed ortholog is 99%.

Group of orthologs #644. Best score 461 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:461

G3JIJ9              	100.00%		A3LQ34              	100.00%
Bootstrap support for G3JIJ9 as seed ortholog is 80%.
Bootstrap support for A3LQ34 as seed ortholog is 100%.

Group of orthologs #645. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:460

G3JUH0              	100.00%		A3LVA4              	100.00%
G3JA89              	31.36%		A3M010              	62.24%
Bootstrap support for G3JUH0 as seed ortholog is 100%.
Bootstrap support for A3LVA4 as seed ortholog is 100%.

Group of orthologs #646. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:460 S.stipitis:238

G3JB31              	100.00%		A3LQK0              	100.00%
Bootstrap support for G3JB31 as seed ortholog is 100%.
Bootstrap support for A3LQK0 as seed ortholog is 99%.

Group of orthologs #647. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:460 S.stipitis:460

G3J818              	100.00%		A3LWI4              	100.00%
Bootstrap support for G3J818 as seed ortholog is 100%.
Bootstrap support for A3LWI4 as seed ortholog is 100%.

Group of orthologs #648. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:460 S.stipitis:460

G3JI75              	100.00%		A3LT38              	100.00%
Bootstrap support for G3JI75 as seed ortholog is 100%.
Bootstrap support for A3LT38 as seed ortholog is 100%.

Group of orthologs #649. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:267 S.stipitis:242

G3JR18              	100.00%		A3LS22              	100.00%
Bootstrap support for G3JR18 as seed ortholog is 100%.
Bootstrap support for A3LS22 as seed ortholog is 100%.

Group of orthologs #650. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:460 S.stipitis:460

G3JQY2              	100.00%		A3LWY0              	100.00%
Bootstrap support for G3JQY2 as seed ortholog is 100%.
Bootstrap support for A3LWY0 as seed ortholog is 100%.

Group of orthologs #651. Best score 459 bits
Score difference with first non-orthologous sequence - C.militaris:314 S.stipitis:273

G3JG61              	100.00%		A3GH91              	100.00%
Bootstrap support for G3JG61 as seed ortholog is 100%.
Bootstrap support for A3GH91 as seed ortholog is 100%.

Group of orthologs #652. Best score 459 bits
Score difference with first non-orthologous sequence - C.militaris:459 S.stipitis:459

G3JQX7              	100.00%		A3GI71              	100.00%
Bootstrap support for G3JQX7 as seed ortholog is 100%.
Bootstrap support for A3GI71 as seed ortholog is 100%.

Group of orthologs #653. Best score 459 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:159

G3JP39              	100.00%		A3LST9              	100.00%
Bootstrap support for G3JP39 as seed ortholog is 99%.
Bootstrap support for A3LST9 as seed ortholog is 99%.

Group of orthologs #654. Best score 458 bits
Score difference with first non-orthologous sequence - C.militaris:384 S.stipitis:458

G3JK93              	100.00%		A3LZ81              	100.00%
G3JBX4              	10.92%		
Bootstrap support for G3JK93 as seed ortholog is 100%.
Bootstrap support for A3LZ81 as seed ortholog is 100%.

Group of orthologs #655. Best score 458 bits
Score difference with first non-orthologous sequence - C.militaris:458 S.stipitis:44

G3J6T6              	100.00%		A3GI83              	100.00%
Bootstrap support for G3J6T6 as seed ortholog is 100%.
Bootstrap support for A3GI83 as seed ortholog is 84%.

Group of orthologs #656. Best score 458 bits
Score difference with first non-orthologous sequence - C.militaris:458 S.stipitis:458

G3JLR0              	100.00%		A3GFS1              	100.00%
Bootstrap support for G3JLR0 as seed ortholog is 100%.
Bootstrap support for A3GFS1 as seed ortholog is 100%.

Group of orthologs #657. Best score 458 bits
Score difference with first non-orthologous sequence - C.militaris:406 S.stipitis:458

G3JPR5              	100.00%		A3LW51              	100.00%
Bootstrap support for G3JPR5 as seed ortholog is 100%.
Bootstrap support for A3LW51 as seed ortholog is 100%.

Group of orthologs #658. Best score 457 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:457

G3JSE1              	100.00%		A3M0G7              	100.00%
G3JNE9              	7.67%		A3LTX3              	13.20%
Bootstrap support for G3JSE1 as seed ortholog is 100%.
Bootstrap support for A3M0G7 as seed ortholog is 100%.

Group of orthologs #659. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:129

G3JLY7              	100.00%		A3GFB9              	100.00%
                    	       		A3LS97              	16.02%
Bootstrap support for G3JLY7 as seed ortholog is 99%.
Bootstrap support for A3GFB9 as seed ortholog is 99%.

Group of orthologs #660. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 S.stipitis:456

G3J4P7              	100.00%		A3LN83              	100.00%
Bootstrap support for G3J4P7 as seed ortholog is 100%.
Bootstrap support for A3LN83 as seed ortholog is 100%.

Group of orthologs #661. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 S.stipitis:456

G3J562              	100.00%		A3LT23              	100.00%
Bootstrap support for G3J562 as seed ortholog is 100%.
Bootstrap support for A3LT23 as seed ortholog is 100%.

Group of orthologs #662. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 S.stipitis:456

G3JET6              	100.00%		A3LNJ0              	100.00%
Bootstrap support for G3JET6 as seed ortholog is 100%.
Bootstrap support for A3LNJ0 as seed ortholog is 100%.

Group of orthologs #663. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 S.stipitis:456

G3JAV0              	100.00%		A3LYH2              	100.00%
Bootstrap support for G3JAV0 as seed ortholog is 100%.
Bootstrap support for A3LYH2 as seed ortholog is 100%.

Group of orthologs #664. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:6

G3JI95              	100.00%		A3LSJ9              	100.00%
Bootstrap support for G3JI95 as seed ortholog is 99%.
Bootstrap support for A3LSJ9 as seed ortholog is 56%.
Alternative seed ortholog is A3LYX8 (6 bits away from this cluster)

Group of orthologs #665. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 S.stipitis:456

G3JST9              	100.00%		A3GGH3              	100.00%
Bootstrap support for G3JST9 as seed ortholog is 100%.
Bootstrap support for A3GGH3 as seed ortholog is 100%.

Group of orthologs #666. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:283

G3JH82              	100.00%		A3LXB7              	100.00%
Bootstrap support for G3JH82 as seed ortholog is 100%.
Bootstrap support for A3LXB7 as seed ortholog is 100%.

Group of orthologs #667. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 S.stipitis:455

G3JPT6              	100.00%		A3GEZ4              	100.00%
G3J702              	21.68%		
Bootstrap support for G3JPT6 as seed ortholog is 100%.
Bootstrap support for A3GEZ4 as seed ortholog is 100%.

Group of orthologs #668. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 S.stipitis:455

G3J7Q3              	100.00%		A3GGY8              	100.00%
Bootstrap support for G3J7Q3 as seed ortholog is 100%.
Bootstrap support for A3GGY8 as seed ortholog is 100%.

Group of orthologs #669. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 S.stipitis:107

G3J6N3              	100.00%		A3LMX8              	100.00%
Bootstrap support for G3J6N3 as seed ortholog is 100%.
Bootstrap support for A3LMX8 as seed ortholog is 92%.

Group of orthologs #670. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:351 S.stipitis:455

G3J9Q3              	100.00%		A3LQU4              	100.00%
Bootstrap support for G3J9Q3 as seed ortholog is 100%.
Bootstrap support for A3LQU4 as seed ortholog is 100%.

Group of orthologs #671. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 S.stipitis:455

G3JAT5              	100.00%		A3LQ46              	100.00%
Bootstrap support for G3JAT5 as seed ortholog is 100%.
Bootstrap support for A3LQ46 as seed ortholog is 100%.

Group of orthologs #672. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:309 S.stipitis:455

G3JGW6              	100.00%		A3LSC7              	100.00%
Bootstrap support for G3JGW6 as seed ortholog is 100%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #673. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:321 S.stipitis:177

G3JKB0              	100.00%		A3LZ69              	100.00%
Bootstrap support for G3JKB0 as seed ortholog is 100%.
Bootstrap support for A3LZ69 as seed ortholog is 99%.

Group of orthologs #674. Best score 454 bits
Score difference with first non-orthologous sequence - C.militaris:454 S.stipitis:454

G3J5J4              	100.00%		A3GGS6              	100.00%
Bootstrap support for G3J5J4 as seed ortholog is 100%.
Bootstrap support for A3GGS6 as seed ortholog is 100%.

Group of orthologs #675. Best score 454 bits
Score difference with first non-orthologous sequence - C.militaris:189 S.stipitis:94

G3J3F3              	100.00%		A3LY46              	100.00%
Bootstrap support for G3J3F3 as seed ortholog is 100%.
Bootstrap support for A3LY46 as seed ortholog is 98%.

Group of orthologs #676. Best score 453 bits
Score difference with first non-orthologous sequence - C.militaris:453 S.stipitis:453

G3JEU0              	100.00%		A3LMT5              	100.00%
Bootstrap support for G3JEU0 as seed ortholog is 100%.
Bootstrap support for A3LMT5 as seed ortholog is 100%.

Group of orthologs #677. Best score 453 bits
Score difference with first non-orthologous sequence - C.militaris:112 S.stipitis:84

G3JSY3              	100.00%		A3LY10              	100.00%
Bootstrap support for G3JSY3 as seed ortholog is 99%.
Bootstrap support for A3LY10 as seed ortholog is 96%.

Group of orthologs #678. Best score 452 bits
Score difference with first non-orthologous sequence - C.militaris:219 S.stipitis:289

G3JFD3              	100.00%		A3LXZ6              	100.00%
Bootstrap support for G3JFD3 as seed ortholog is 100%.
Bootstrap support for A3LXZ6 as seed ortholog is 100%.

Group of orthologs #679. Best score 451 bits
Score difference with first non-orthologous sequence - C.militaris:451 S.stipitis:451

G3J5U1              	100.00%		A3LWD1              	100.00%
Bootstrap support for G3J5U1 as seed ortholog is 100%.
Bootstrap support for A3LWD1 as seed ortholog is 100%.

Group of orthologs #680. Best score 451 bits
Score difference with first non-orthologous sequence - C.militaris:305 S.stipitis:299

G3JJC6              	100.00%		A3LWH3              	100.00%
Bootstrap support for G3JJC6 as seed ortholog is 100%.
Bootstrap support for A3LWH3 as seed ortholog is 100%.

Group of orthologs #681. Best score 451 bits
Score difference with first non-orthologous sequence - C.militaris:214 S.stipitis:451

G3JUW9              	100.00%		A3LVT8              	100.00%
Bootstrap support for G3JUW9 as seed ortholog is 100%.
Bootstrap support for A3LVT8 as seed ortholog is 100%.

Group of orthologs #682. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:450

G3J432              	100.00%		A3GGP2              	100.00%
Bootstrap support for G3J432 as seed ortholog is 100%.
Bootstrap support for A3GGP2 as seed ortholog is 100%.

Group of orthologs #683. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:450

G3J8K4              	100.00%		A3GGR4              	100.00%
Bootstrap support for G3J8K4 as seed ortholog is 100%.
Bootstrap support for A3GGR4 as seed ortholog is 100%.

Group of orthologs #684. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:450

G3J434              	100.00%		A3LR90              	100.00%
Bootstrap support for G3J434 as seed ortholog is 100%.
Bootstrap support for A3LR90 as seed ortholog is 100%.

Group of orthologs #685. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:450

G3JCQ4              	100.00%		A3GHX2              	100.00%
Bootstrap support for G3JCQ4 as seed ortholog is 100%.
Bootstrap support for A3GHX2 as seed ortholog is 100%.

Group of orthologs #686. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:450

G3J803              	100.00%		A3LYZ5              	100.00%
Bootstrap support for G3J803 as seed ortholog is 100%.
Bootstrap support for A3LYZ5 as seed ortholog is 100%.

Group of orthologs #687. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:450

G3JR03              	100.00%		A3GF66              	100.00%
Bootstrap support for G3JR03 as seed ortholog is 100%.
Bootstrap support for A3GF66 as seed ortholog is 100%.

Group of orthologs #688. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:313 S.stipitis:210

G3JGQ8              	100.00%		A3LUB6              	100.00%
Bootstrap support for G3JGQ8 as seed ortholog is 100%.
Bootstrap support for A3LUB6 as seed ortholog is 99%.

Group of orthologs #689. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:450 S.stipitis:188

G3JJN0              	100.00%		A3LXK3              	100.00%
Bootstrap support for G3JJN0 as seed ortholog is 100%.
Bootstrap support for A3LXK3 as seed ortholog is 100%.

Group of orthologs #690. Best score 450 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:297

G3JTP1              	100.00%		A3LSV1              	100.00%
Bootstrap support for G3JTP1 as seed ortholog is 98%.
Bootstrap support for A3LSV1 as seed ortholog is 100%.

Group of orthologs #691. Best score 449 bits
Score difference with first non-orthologous sequence - C.militaris:449 S.stipitis:449

G3J449              	100.00%		A3LSM4              	100.00%
Bootstrap support for G3J449 as seed ortholog is 100%.
Bootstrap support for A3LSM4 as seed ortholog is 100%.

Group of orthologs #692. Best score 449 bits
Score difference with first non-orthologous sequence - C.militaris:392 S.stipitis:185

G3JTK2              	100.00%		A3LXG9              	100.00%
Bootstrap support for G3JTK2 as seed ortholog is 100%.
Bootstrap support for A3LXG9 as seed ortholog is 100%.

Group of orthologs #693. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:80

G3JB57              	100.00%		A3LS65              	100.00%
                    	       		A3LUX3              	65.92%
Bootstrap support for G3JB57 as seed ortholog is 99%.
Bootstrap support for A3LS65 as seed ortholog is 97%.

Group of orthologs #694. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:448

G3JDX3              	100.00%		A3LNB3              	100.00%
Bootstrap support for G3JDX3 as seed ortholog is 100%.
Bootstrap support for A3LNB3 as seed ortholog is 100%.

Group of orthologs #695. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 S.stipitis:448

G3JGM6              	100.00%		A3GHU3              	100.00%
Bootstrap support for G3JGM6 as seed ortholog is 100%.
Bootstrap support for A3GHU3 as seed ortholog is 100%.

Group of orthologs #696. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 S.stipitis:448

G3J9I1              	100.00%		A3LWC0              	100.00%
Bootstrap support for G3J9I1 as seed ortholog is 100%.
Bootstrap support for A3LWC0 as seed ortholog is 100%.

Group of orthologs #697. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 S.stipitis:448

G3JL73              	100.00%		A3GHI9              	100.00%
Bootstrap support for G3JL73 as seed ortholog is 100%.
Bootstrap support for A3GHI9 as seed ortholog is 100%.

Group of orthologs #698. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 S.stipitis:448

G3JB07              	100.00%		A3M0E1              	100.00%
Bootstrap support for G3JB07 as seed ortholog is 100%.
Bootstrap support for A3M0E1 as seed ortholog is 100%.

Group of orthologs #699. Best score 447 bits
Score difference with first non-orthologous sequence - C.militaris:447 S.stipitis:447

G3JF75              	100.00%		A3GGJ5              	100.00%
Bootstrap support for G3JF75 as seed ortholog is 100%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #700. Best score 447 bits
Score difference with first non-orthologous sequence - C.militaris:447 S.stipitis:447

G3JEJ4              	100.00%		A3LUH7              	100.00%
Bootstrap support for G3JEJ4 as seed ortholog is 100%.
Bootstrap support for A3LUH7 as seed ortholog is 100%.

Group of orthologs #701. Best score 446 bits
Score difference with first non-orthologous sequence - C.militaris:446 S.stipitis:342

G3JJ08              	100.00%		A3GG00              	100.00%
Bootstrap support for G3JJ08 as seed ortholog is 100%.
Bootstrap support for A3GG00 as seed ortholog is 100%.

Group of orthologs #702. Best score 446 bits
Score difference with first non-orthologous sequence - C.militaris:446 S.stipitis:446

G3JJM9              	100.00%		A3LN62              	100.00%
Bootstrap support for G3JJM9 as seed ortholog is 100%.
Bootstrap support for A3LN62 as seed ortholog is 100%.

Group of orthologs #703. Best score 446 bits
Score difference with first non-orthologous sequence - C.militaris:405 S.stipitis:396

G3JID8              	100.00%		A3LV54              	100.00%
Bootstrap support for G3JID8 as seed ortholog is 100%.
Bootstrap support for A3LV54 as seed ortholog is 100%.

Group of orthologs #704. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:445 S.stipitis:445

G3JKB3              	100.00%		A3GFH7              	100.00%
G3JQC9              	24.11%		
Bootstrap support for G3JKB3 as seed ortholog is 100%.
Bootstrap support for A3GFH7 as seed ortholog is 100%.

Group of orthologs #705. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:445 S.stipitis:445

G3JHX1              	100.00%		A3GFK2              	100.00%
Bootstrap support for G3JHX1 as seed ortholog is 100%.
Bootstrap support for A3GFK2 as seed ortholog is 100%.

Group of orthologs #706. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:445

G3JPM4              	100.00%		A3GF87              	100.00%
Bootstrap support for G3JPM4 as seed ortholog is 99%.
Bootstrap support for A3GF87 as seed ortholog is 100%.

Group of orthologs #707. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:140 S.stipitis:49

G3JKQ4              	100.00%		A3LYN2              	100.00%
Bootstrap support for G3JKQ4 as seed ortholog is 99%.
Bootstrap support for A3LYN2 as seed ortholog is 87%.

Group of orthologs #708. Best score 444 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:444

G3JUQ5              	100.00%		A3LRY5              	100.00%
                    	       		A3LRY4              	6.72%
Bootstrap support for G3JUQ5 as seed ortholog is 99%.
Bootstrap support for A3LRY5 as seed ortholog is 100%.

Group of orthologs #709. Best score 444 bits
Score difference with first non-orthologous sequence - C.militaris:444 S.stipitis:444

G3J451              	100.00%		A3LQY0              	100.00%
Bootstrap support for G3J451 as seed ortholog is 100%.
Bootstrap support for A3LQY0 as seed ortholog is 100%.

Group of orthologs #710. Best score 443 bits
Score difference with first non-orthologous sequence - C.militaris:443 S.stipitis:340

G3JSS1              	100.00%		A3GF49              	100.00%
Bootstrap support for G3JSS1 as seed ortholog is 100%.
Bootstrap support for A3GF49 as seed ortholog is 100%.

Group of orthologs #711. Best score 442 bits
Score difference with first non-orthologous sequence - C.militaris:442 S.stipitis:442

G3J7J7              	100.00%		A3LW59              	100.00%
Bootstrap support for G3J7J7 as seed ortholog is 100%.
Bootstrap support for A3LW59 as seed ortholog is 100%.

Group of orthologs #712. Best score 441 bits
Score difference with first non-orthologous sequence - C.militaris:441 S.stipitis:441

G3J4R8              	100.00%		A3GF83              	100.00%
Bootstrap support for G3J4R8 as seed ortholog is 100%.
Bootstrap support for A3GF83 as seed ortholog is 100%.

Group of orthologs #713. Best score 441 bits
Score difference with first non-orthologous sequence - C.militaris:441 S.stipitis:441

G3JH65              	100.00%		A3LXC4              	100.00%
Bootstrap support for G3JH65 as seed ortholog is 100%.
Bootstrap support for A3LXC4 as seed ortholog is 100%.

Group of orthologs #714. Best score 441 bits
Score difference with first non-orthologous sequence - C.militaris:388 S.stipitis:441

G3JNX2              	100.00%		A3M063              	100.00%
Bootstrap support for G3JNX2 as seed ortholog is 100%.
Bootstrap support for A3M063 as seed ortholog is 100%.

Group of orthologs #715. Best score 440 bits
Score difference with first non-orthologous sequence - C.militaris:440 S.stipitis:440

G3J4I1              	100.00%		A3LR45              	100.00%
Bootstrap support for G3J4I1 as seed ortholog is 100%.
Bootstrap support for A3LR45 as seed ortholog is 100%.

Group of orthologs #716. Best score 440 bits
Score difference with first non-orthologous sequence - C.militaris:440 S.stipitis:440

G3J4L5              	100.00%		A3LWV8              	100.00%
Bootstrap support for G3J4L5 as seed ortholog is 100%.
Bootstrap support for A3LWV8 as seed ortholog is 100%.

Group of orthologs #717. Best score 440 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:440

G3JQH6              	100.00%		A3LNL4              	100.00%
Bootstrap support for G3JQH6 as seed ortholog is 99%.
Bootstrap support for A3LNL4 as seed ortholog is 100%.

Group of orthologs #718. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:269

G3J590              	100.00%		A3LP87              	100.00%
Bootstrap support for G3J590 as seed ortholog is 100%.
Bootstrap support for A3LP87 as seed ortholog is 100%.

Group of orthologs #719. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:439 S.stipitis:439

G3J7A9              	100.00%		A3LN97              	100.00%
Bootstrap support for G3J7A9 as seed ortholog is 100%.
Bootstrap support for A3LN97 as seed ortholog is 100%.

Group of orthologs #720. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:439 S.stipitis:439

G3JPV9              	100.00%		A3LP23              	100.00%
Bootstrap support for G3JPV9 as seed ortholog is 100%.
Bootstrap support for A3LP23 as seed ortholog is 100%.

Group of orthologs #721. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:439 S.stipitis:439

G3JGR9              	100.00%		A3M056              	100.00%
Bootstrap support for G3JGR9 as seed ortholog is 100%.
Bootstrap support for A3M056 as seed ortholog is 100%.

Group of orthologs #722. Best score 438 bits
Score difference with first non-orthologous sequence - C.militaris:438 S.stipitis:269

G3JN64              	100.00%		A3LP41              	100.00%
Bootstrap support for G3JN64 as seed ortholog is 100%.
Bootstrap support for A3LP41 as seed ortholog is 100%.

Group of orthologs #723. Best score 438 bits
Score difference with first non-orthologous sequence - C.militaris:438 S.stipitis:438

G3JU33              	100.00%		A3GFV1              	100.00%
Bootstrap support for G3JU33 as seed ortholog is 100%.
Bootstrap support for A3GFV1 as seed ortholog is 100%.

Group of orthologs #724. Best score 437 bits
Score difference with first non-orthologous sequence - C.militaris:437 S.stipitis:355

G3JRS0              	100.00%		A3GEZ0              	100.00%
Bootstrap support for G3JRS0 as seed ortholog is 100%.
Bootstrap support for A3GEZ0 as seed ortholog is 100%.

Group of orthologs #725. Best score 437 bits
Score difference with first non-orthologous sequence - C.militaris:437 S.stipitis:437

G3JN59              	100.00%		A3LTJ3              	100.00%
Bootstrap support for G3JN59 as seed ortholog is 100%.
Bootstrap support for A3LTJ3 as seed ortholog is 100%.

Group of orthologs #726. Best score 437 bits
Score difference with first non-orthologous sequence - C.militaris:437 S.stipitis:437

G3JUV4              	100.00%		A3LVF8              	100.00%
Bootstrap support for G3JUV4 as seed ortholog is 100%.
Bootstrap support for A3LVF8 as seed ortholog is 100%.

Group of orthologs #727. Best score 437 bits
Score difference with first non-orthologous sequence - C.militaris:215 S.stipitis:220

G3JSE8              	100.00%		A3LZZ3              	100.00%
Bootstrap support for G3JSE8 as seed ortholog is 100%.
Bootstrap support for A3LZZ3 as seed ortholog is 99%.

Group of orthologs #728. Best score 436 bits
Score difference with first non-orthologous sequence - C.militaris:436 S.stipitis:436

G3J9E0              	100.00%		A3LQH5              	100.00%
Bootstrap support for G3J9E0 as seed ortholog is 100%.
Bootstrap support for A3LQH5 as seed ortholog is 100%.

Group of orthologs #729. Best score 436 bits
Score difference with first non-orthologous sequence - C.militaris:436 S.stipitis:436

G3J7K9              	100.00%		A3LWP3              	100.00%
Bootstrap support for G3J7K9 as seed ortholog is 100%.
Bootstrap support for A3LWP3 as seed ortholog is 100%.

Group of orthologs #730. Best score 436 bits
Score difference with first non-orthologous sequence - C.militaris:436 S.stipitis:436

G3JJS4              	100.00%		A3GH78              	100.00%
Bootstrap support for G3JJS4 as seed ortholog is 100%.
Bootstrap support for A3GH78 as seed ortholog is 100%.

Group of orthologs #731. Best score 435 bits
Score difference with first non-orthologous sequence - C.militaris:435 S.stipitis:435

G3J684              	100.00%		A3LSN7              	100.00%
                    	       		A3GIE7              	56.74%
Bootstrap support for G3J684 as seed ortholog is 100%.
Bootstrap support for A3LSN7 as seed ortholog is 100%.

Group of orthologs #732. Best score 435 bits
Score difference with first non-orthologous sequence - C.militaris:435 S.stipitis:435

G3J3G5              	100.00%		A3LN13              	100.00%
Bootstrap support for G3J3G5 as seed ortholog is 100%.
Bootstrap support for A3LN13 as seed ortholog is 100%.

Group of orthologs #733. Best score 435 bits
Score difference with first non-orthologous sequence - C.militaris:435 S.stipitis:198

G3J3Z3              	100.00%		A3LNI3              	100.00%
Bootstrap support for G3J3Z3 as seed ortholog is 100%.
Bootstrap support for A3LNI3 as seed ortholog is 99%.

Group of orthologs #734. Best score 434 bits
Score difference with first non-orthologous sequence - C.militaris:434 S.stipitis:434

G3JIA7              	100.00%		A3GEY7              	100.00%
G3JFI0              	13.36%		
Bootstrap support for G3JIA7 as seed ortholog is 100%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #735. Best score 434 bits
Score difference with first non-orthologous sequence - C.militaris:434 S.stipitis:434

G3JBD9              	100.00%		A3GFN6              	100.00%
Bootstrap support for G3JBD9 as seed ortholog is 100%.
Bootstrap support for A3GFN6 as seed ortholog is 100%.

Group of orthologs #736. Best score 434 bits
Score difference with first non-orthologous sequence - C.militaris:434 S.stipitis:434

G3J8P3              	100.00%		A3LUU1              	100.00%
Bootstrap support for G3J8P3 as seed ortholog is 100%.
Bootstrap support for A3LUU1 as seed ortholog is 100%.

Group of orthologs #737. Best score 434 bits
Score difference with first non-orthologous sequence - C.militaris:434 S.stipitis:434

G3JI10              	100.00%		A3LSX5              	100.00%
Bootstrap support for G3JI10 as seed ortholog is 100%.
Bootstrap support for A3LSX5 as seed ortholog is 100%.

Group of orthologs #738. Best score 434 bits
Score difference with first non-orthologous sequence - C.militaris:434 S.stipitis:434

G3JMJ7              	100.00%		A3LU80              	100.00%
Bootstrap support for G3JMJ7 as seed ortholog is 100%.
Bootstrap support for A3LU80 as seed ortholog is 100%.

Group of orthologs #739. Best score 433 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:128

G3JJD6              	100.00%		A3LZ01              	100.00%
Bootstrap support for G3JJD6 as seed ortholog is 96%.
Bootstrap support for A3LZ01 as seed ortholog is 99%.

Group of orthologs #740. Best score 432 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:178

G3JJU0              	100.00%		A3LTU4              	100.00%
Bootstrap support for G3JJU0 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 100%.

Group of orthologs #741. Best score 431 bits
Score difference with first non-orthologous sequence - C.militaris:431 S.stipitis:344

G3JCJ8              	100.00%		A3GI66              	100.00%
Bootstrap support for G3JCJ8 as seed ortholog is 100%.
Bootstrap support for A3GI66 as seed ortholog is 100%.

Group of orthologs #742. Best score 430 bits
Score difference with first non-orthologous sequence - C.militaris:430 S.stipitis:430

G3J3G9              	100.00%		A3LZK8              	100.00%
Bootstrap support for G3J3G9 as seed ortholog is 100%.
Bootstrap support for A3LZK8 as seed ortholog is 100%.

Group of orthologs #743. Best score 430 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:321

G3JCY5              	100.00%		A3LYC9              	100.00%
Bootstrap support for G3JCY5 as seed ortholog is 99%.
Bootstrap support for A3LYC9 as seed ortholog is 100%.

Group of orthologs #744. Best score 429 bits
Score difference with first non-orthologous sequence - C.militaris:271 S.stipitis:275

G3JSV6              	100.00%		A3LNF5              	100.00%
G3JEM6              	7.85%		
G3J4H7              	5.04%		
Bootstrap support for G3JSV6 as seed ortholog is 100%.
Bootstrap support for A3LNF5 as seed ortholog is 100%.

Group of orthologs #745. Best score 429 bits
Score difference with first non-orthologous sequence - C.militaris:429 S.stipitis:429

G3JIQ4              	100.00%		A3GGD9              	100.00%
Bootstrap support for G3JIQ4 as seed ortholog is 100%.
Bootstrap support for A3GGD9 as seed ortholog is 100%.

Group of orthologs #746. Best score 428 bits
Score difference with first non-orthologous sequence - C.militaris:361 S.stipitis:428

G3JRK8              	100.00%		A3GHB4              	100.00%
G3JGP2              	52.89%		
Bootstrap support for G3JRK8 as seed ortholog is 100%.
Bootstrap support for A3GHB4 as seed ortholog is 100%.

Group of orthologs #747. Best score 428 bits
Score difference with first non-orthologous sequence - C.militaris:428 S.stipitis:428

G3JJ14              	100.00%		A3GID1              	100.00%
Bootstrap support for G3JJ14 as seed ortholog is 100%.
Bootstrap support for A3GID1 as seed ortholog is 100%.

Group of orthologs #748. Best score 428 bits
Score difference with first non-orthologous sequence - C.militaris:428 S.stipitis:428

G3JQ81              	100.00%		A3LR63              	100.00%
Bootstrap support for G3JQ81 as seed ortholog is 100%.
Bootstrap support for A3LR63 as seed ortholog is 100%.

Group of orthologs #749. Best score 428 bits
Score difference with first non-orthologous sequence - C.militaris:428 S.stipitis:428

G3JRU4              	100.00%		A3LYL4              	100.00%
Bootstrap support for G3JRU4 as seed ortholog is 100%.
Bootstrap support for A3LYL4 as seed ortholog is 100%.

Group of orthologs #750. Best score 427 bits
Score difference with first non-orthologous sequence - C.militaris:427 S.stipitis:427

G3J3T8              	100.00%		A3LSG9              	100.00%
Bootstrap support for G3J3T8 as seed ortholog is 100%.
Bootstrap support for A3LSG9 as seed ortholog is 100%.

Group of orthologs #751. Best score 427 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:427

G3J957              	100.00%		A3LS89              	100.00%
Bootstrap support for G3J957 as seed ortholog is 99%.
Bootstrap support for A3LS89 as seed ortholog is 100%.

Group of orthologs #752. Best score 426 bits
Score difference with first non-orthologous sequence - C.militaris:426 S.stipitis:426

G3JDM9              	100.00%		A3LUF7              	100.00%
Bootstrap support for G3JDM9 as seed ortholog is 100%.
Bootstrap support for A3LUF7 as seed ortholog is 100%.

Group of orthologs #753. Best score 426 bits
Score difference with first non-orthologous sequence - C.militaris:359 S.stipitis:426

G3JA32              	100.00%		A3M0D0              	100.00%
Bootstrap support for G3JA32 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #754. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:425 S.stipitis:425

G3JEM0              	100.00%		A3LWS6              	100.00%
Bootstrap support for G3JEM0 as seed ortholog is 100%.
Bootstrap support for A3LWS6 as seed ortholog is 100%.

Group of orthologs #755. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:425 S.stipitis:229

G3JKI4              	100.00%		A3LU10              	100.00%
Bootstrap support for G3JKI4 as seed ortholog is 100%.
Bootstrap support for A3LU10 as seed ortholog is 99%.

Group of orthologs #756. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:425 S.stipitis:425

G3JN72              	100.00%		A3LW87              	100.00%
Bootstrap support for G3JN72 as seed ortholog is 100%.
Bootstrap support for A3LW87 as seed ortholog is 100%.

Group of orthologs #757. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:425 S.stipitis:425

G3JU16              	100.00%		A3LR19              	100.00%
Bootstrap support for G3JU16 as seed ortholog is 100%.
Bootstrap support for A3LR19 as seed ortholog is 100%.

Group of orthologs #758. Best score 424 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:424

G3JL72              	100.00%		A3GHU0              	100.00%
                    	       		A3LUV0              	23.63%
Bootstrap support for G3JL72 as seed ortholog is 99%.
Bootstrap support for A3GHU0 as seed ortholog is 100%.

Group of orthologs #759. Best score 424 bits
Score difference with first non-orthologous sequence - C.militaris:424 S.stipitis:254

G3JAR2              	100.00%		A3LYP6              	100.00%
Bootstrap support for G3JAR2 as seed ortholog is 100%.
Bootstrap support for A3LYP6 as seed ortholog is 100%.

Group of orthologs #760. Best score 424 bits
Score difference with first non-orthologous sequence - C.militaris:424 S.stipitis:424

G3JQL4              	100.00%		A3GID9              	100.00%
Bootstrap support for G3JQL4 as seed ortholog is 100%.
Bootstrap support for A3GID9 as seed ortholog is 100%.

Group of orthologs #761. Best score 424 bits
Score difference with first non-orthologous sequence - C.militaris:424 S.stipitis:424

G3JNB1              	100.00%		A3LR32              	100.00%
Bootstrap support for G3JNB1 as seed ortholog is 100%.
Bootstrap support for A3LR32 as seed ortholog is 100%.

Group of orthologs #762. Best score 424 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:424

G3JFW9              	100.00%		A3LZ31              	100.00%
Bootstrap support for G3JFW9 as seed ortholog is 99%.
Bootstrap support for A3LZ31 as seed ortholog is 100%.

Group of orthologs #763. Best score 424 bits
Score difference with first non-orthologous sequence - C.militaris:383 S.stipitis:424

G3JSJ4              	100.00%		A3LUU8              	100.00%
Bootstrap support for G3JSJ4 as seed ortholog is 100%.
Bootstrap support for A3LUU8 as seed ortholog is 100%.

Group of orthologs #764. Best score 423 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:423

G3JCZ7              	100.00%		A3GF89              	100.00%
Bootstrap support for G3JCZ7 as seed ortholog is 99%.
Bootstrap support for A3GF89 as seed ortholog is 100%.

Group of orthologs #765. Best score 423 bits
Score difference with first non-orthologous sequence - C.militaris:423 S.stipitis:423

G3JGM3              	100.00%		A3GG91              	100.00%
Bootstrap support for G3JGM3 as seed ortholog is 100%.
Bootstrap support for A3GG91 as seed ortholog is 100%.

Group of orthologs #766. Best score 423 bits
Score difference with first non-orthologous sequence - C.militaris:423 S.stipitis:423

G3JGR5              	100.00%		A3GGS9              	100.00%
Bootstrap support for G3JGR5 as seed ortholog is 100%.
Bootstrap support for A3GGS9 as seed ortholog is 100%.

Group of orthologs #767. Best score 423 bits
Score difference with first non-orthologous sequence - C.militaris:423 S.stipitis:423

G3JAV4              	100.00%		A3LWD9              	100.00%
Bootstrap support for G3JAV4 as seed ortholog is 100%.
Bootstrap support for A3LWD9 as seed ortholog is 100%.

Group of orthologs #768. Best score 423 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:64

G3JI24              	100.00%		A3M0N4              	100.00%
Bootstrap support for G3JI24 as seed ortholog is 89%.
Bootstrap support for A3M0N4 as seed ortholog is 91%.

Group of orthologs #769. Best score 422 bits
Score difference with first non-orthologous sequence - C.militaris:422 S.stipitis:422

G3JCG4              	100.00%		A3GFV4              	100.00%
Bootstrap support for G3JCG4 as seed ortholog is 100%.
Bootstrap support for A3GFV4 as seed ortholog is 100%.

Group of orthologs #770. Best score 422 bits
Score difference with first non-orthologous sequence - C.militaris:422 S.stipitis:422

G3JLM6              	100.00%		A3GH80              	100.00%
Bootstrap support for G3JLM6 as seed ortholog is 100%.
Bootstrap support for A3GH80 as seed ortholog is 100%.

Group of orthologs #771. Best score 422 bits
Score difference with first non-orthologous sequence - C.militaris:319 S.stipitis:371

G3JGW0              	100.00%		A3LYH9              	100.00%
Bootstrap support for G3JGW0 as seed ortholog is 100%.
Bootstrap support for A3LYH9 as seed ortholog is 100%.

Group of orthologs #772. Best score 421 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:146

G3J3I1              	100.00%		F2Z662              	100.00%
G3JH12              	8.84%		A3GES9              	66.76%
                    	       		F2Z689              	66.76%
                    	       		F2Z690              	66.76%
Bootstrap support for G3J3I1 as seed ortholog is 98%.
Bootstrap support for F2Z662 as seed ortholog is 99%.

Group of orthologs #773. Best score 421 bits
Score difference with first non-orthologous sequence - C.militaris:421 S.stipitis:421

G3J8F1              	100.00%		A3LR29              	100.00%
Bootstrap support for G3J8F1 as seed ortholog is 100%.
Bootstrap support for A3LR29 as seed ortholog is 100%.

Group of orthologs #774. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:295 S.stipitis:370

G3J668              	100.00%		A3LWN7              	100.00%
Bootstrap support for G3J668 as seed ortholog is 100%.
Bootstrap support for A3LWN7 as seed ortholog is 100%.

Group of orthologs #775. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:420

G3JLZ6              	100.00%		A3GFF3              	100.00%
Bootstrap support for G3JLZ6 as seed ortholog is 99%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #776. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:420 S.stipitis:420

G3JQK6              	100.00%		A3GHQ6              	100.00%
Bootstrap support for G3JQK6 as seed ortholog is 100%.
Bootstrap support for A3GHQ6 as seed ortholog is 100%.

Group of orthologs #777. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:420 S.stipitis:420

G3JN86              	100.00%		A3LRN7              	100.00%
Bootstrap support for G3JN86 as seed ortholog is 100%.
Bootstrap support for A3LRN7 as seed ortholog is 100%.

Group of orthologs #778. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:75

G3JQS2              	100.00%		A3LT70              	100.00%
Bootstrap support for G3JQS2 as seed ortholog is 96%.
Bootstrap support for A3LT70 as seed ortholog is 95%.

Group of orthologs #779. Best score 419 bits
Score difference with first non-orthologous sequence - C.militaris:419 S.stipitis:110

G3J6B8              	100.00%		A3LNY9              	100.00%
                    	       		A3LNY8              	14.49%
Bootstrap support for G3J6B8 as seed ortholog is 100%.
Bootstrap support for A3LNY9 as seed ortholog is 99%.

Group of orthologs #780. Best score 419 bits
Score difference with first non-orthologous sequence - C.militaris:419 S.stipitis:419

G3JKQ3              	100.00%		A3GEZ8              	100.00%
Bootstrap support for G3JKQ3 as seed ortholog is 100%.
Bootstrap support for A3GEZ8 as seed ortholog is 100%.

Group of orthologs #781. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:305

G3J9Z0              	100.00%		O00097              	100.00%
                    	       		O13309              	59.23%
Bootstrap support for G3J9Z0 as seed ortholog is 100%.
Bootstrap support for O00097 as seed ortholog is 100%.

Group of orthologs #782. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:323 S.stipitis:335

G3J5U9              	100.00%		A3LWH7              	100.00%
Bootstrap support for G3J5U9 as seed ortholog is 100%.
Bootstrap support for A3LWH7 as seed ortholog is 100%.

Group of orthologs #783. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:418

G3JFM9              	100.00%		A3LQR2              	100.00%
Bootstrap support for G3JFM9 as seed ortholog is 98%.
Bootstrap support for A3LQR2 as seed ortholog is 100%.

Group of orthologs #784. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:418

G3JPP7              	100.00%		A3LW98              	100.00%
Bootstrap support for G3JPP7 as seed ortholog is 100%.
Bootstrap support for A3LW98 as seed ortholog is 100%.

Group of orthologs #785. Best score 417 bits
Score difference with first non-orthologous sequence - C.militaris:417 S.stipitis:417

G3J681              	100.00%		A3LZT6              	100.00%
Bootstrap support for G3J681 as seed ortholog is 100%.
Bootstrap support for A3LZT6 as seed ortholog is 100%.

Group of orthologs #786. Best score 417 bits
Score difference with first non-orthologous sequence - C.militaris:417 S.stipitis:417

G3JE25              	100.00%		A3LWT7              	100.00%
Bootstrap support for G3JE25 as seed ortholog is 100%.
Bootstrap support for A3LWT7 as seed ortholog is 100%.

Group of orthologs #787. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:330

G3JRV1              	100.00%		A3LX36              	100.00%
                    	       		A3LPJ9              	21.41%
Bootstrap support for G3JRV1 as seed ortholog is 99%.
Bootstrap support for A3LX36 as seed ortholog is 100%.

Group of orthologs #788. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:416 S.stipitis:416

G3J3V6              	100.00%		A3LTK3              	100.00%
Bootstrap support for G3J3V6 as seed ortholog is 100%.
Bootstrap support for A3LTK3 as seed ortholog is 100%.

Group of orthologs #789. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:416 S.stipitis:416

G3J6H5              	100.00%		A3LTN8              	100.00%
Bootstrap support for G3J6H5 as seed ortholog is 100%.
Bootstrap support for A3LTN8 as seed ortholog is 100%.

Group of orthologs #790. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:416 S.stipitis:416

G3JA59              	100.00%		A3LVW1              	100.00%
Bootstrap support for G3JA59 as seed ortholog is 100%.
Bootstrap support for A3LVW1 as seed ortholog is 100%.

Group of orthologs #791. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:111

G3JGD0              	100.00%		A3LV42              	100.00%
Bootstrap support for G3JGD0 as seed ortholog is 99%.
Bootstrap support for A3LV42 as seed ortholog is 99%.

Group of orthologs #792. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3J9R5              	100.00%		A3LZ47              	100.00%
                    	       		A3GFG0              	96.40%
Bootstrap support for G3J9R5 as seed ortholog is 100%.
Bootstrap support for A3LZ47 as seed ortholog is 100%.

Group of orthologs #793. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3JJX4              	100.00%		A3LVZ8              	100.00%
                    	       		A3GG33              	32.46%
Bootstrap support for G3JJX4 as seed ortholog is 100%.
Bootstrap support for A3LVZ8 as seed ortholog is 100%.

Group of orthologs #794. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3J697              	100.00%		A3LS87              	100.00%
Bootstrap support for G3J697 as seed ortholog is 100%.
Bootstrap support for A3LS87 as seed ortholog is 100%.

Group of orthologs #795. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3J3L4              	100.00%		A3LV92              	100.00%
Bootstrap support for G3J3L4 as seed ortholog is 100%.
Bootstrap support for A3LV92 as seed ortholog is 100%.

Group of orthologs #796. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3JF46              	100.00%		A3GGB3              	100.00%
Bootstrap support for G3JF46 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #797. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:277 S.stipitis:415

G3J921              	100.00%		A3LUT4              	100.00%
Bootstrap support for G3J921 as seed ortholog is 100%.
Bootstrap support for A3LUT4 as seed ortholog is 100%.

Group of orthologs #798. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:359

G3JD62              	100.00%		A3LYV4              	100.00%
Bootstrap support for G3JD62 as seed ortholog is 100%.
Bootstrap support for A3LYV4 as seed ortholog is 100%.

Group of orthologs #799. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3JHB3              	100.00%		A3LYF5              	100.00%
Bootstrap support for G3JHB3 as seed ortholog is 100%.
Bootstrap support for A3LYF5 as seed ortholog is 100%.

Group of orthologs #800. Best score 415 bits
Score difference with first non-orthologous sequence - C.militaris:415 S.stipitis:415

G3JU40              	100.00%		A3LQG4              	100.00%
Bootstrap support for G3JU40 as seed ortholog is 100%.
Bootstrap support for A3LQG4 as seed ortholog is 100%.

Group of orthologs #801. Best score 414 bits
Score difference with first non-orthologous sequence - C.militaris:414 S.stipitis:414

G3JFB8              	100.00%		A3GG08              	100.00%
G3JLA1              	26.50%		
Bootstrap support for G3JFB8 as seed ortholog is 100%.
Bootstrap support for A3GG08 as seed ortholog is 100%.

Group of orthologs #802. Best score 414 bits
Score difference with first non-orthologous sequence - C.militaris:414 S.stipitis:414

G3J7D7              	100.00%		A3LUM7              	100.00%
Bootstrap support for G3J7D7 as seed ortholog is 100%.
Bootstrap support for A3LUM7 as seed ortholog is 100%.

Group of orthologs #803. Best score 414 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:361

G3J4T0              	100.00%		A3LXZ1              	100.00%
Bootstrap support for G3J4T0 as seed ortholog is 100%.
Bootstrap support for A3LXZ1 as seed ortholog is 100%.

Group of orthologs #804. Best score 414 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:216

G3JLI4              	100.00%		A3LSI2              	100.00%
Bootstrap support for G3JLI4 as seed ortholog is 100%.
Bootstrap support for A3LSI2 as seed ortholog is 99%.

Group of orthologs #805. Best score 413 bits
Score difference with first non-orthologous sequence - C.militaris:413 S.stipitis:413

G3JCS3              	100.00%		A3LN72              	100.00%
Bootstrap support for G3JCS3 as seed ortholog is 100%.
Bootstrap support for A3LN72 as seed ortholog is 100%.

Group of orthologs #806. Best score 413 bits
Score difference with first non-orthologous sequence - C.militaris:413 S.stipitis:413

G3J7Y8              	100.00%		A3LVH0              	100.00%
Bootstrap support for G3J7Y8 as seed ortholog is 100%.
Bootstrap support for A3LVH0 as seed ortholog is 100%.

Group of orthologs #807. Best score 413 bits
Score difference with first non-orthologous sequence - C.militaris:413 S.stipitis:413

G3JSP1              	100.00%		A3GH32              	100.00%
Bootstrap support for G3JSP1 as seed ortholog is 100%.
Bootstrap support for A3GH32 as seed ortholog is 100%.

Group of orthologs #808. Best score 413 bits
Score difference with first non-orthologous sequence - C.militaris:413 S.stipitis:413

G3JKF4              	100.00%		A3LWF9              	100.00%
Bootstrap support for G3JKF4 as seed ortholog is 100%.
Bootstrap support for A3LWF9 as seed ortholog is 100%.

Group of orthologs #809. Best score 412 bits
Score difference with first non-orthologous sequence - C.militaris:412 S.stipitis:412

G3JB73              	100.00%		A3GFC2              	100.00%
Bootstrap support for G3JB73 as seed ortholog is 100%.
Bootstrap support for A3GFC2 as seed ortholog is 100%.

Group of orthologs #810. Best score 412 bits
Score difference with first non-orthologous sequence - C.militaris:412 S.stipitis:412

G3J705              	100.00%		A3M042              	100.00%
Bootstrap support for G3J705 as seed ortholog is 100%.
Bootstrap support for A3M042 as seed ortholog is 100%.

Group of orthologs #811. Best score 412 bits
Score difference with first non-orthologous sequence - C.militaris:314 S.stipitis:412

G3JH73              	100.00%		A3LYL3              	100.00%
Bootstrap support for G3JH73 as seed ortholog is 100%.
Bootstrap support for A3LYL3 as seed ortholog is 100%.

Group of orthologs #812. Best score 411 bits
Score difference with first non-orthologous sequence - C.militaris:317 S.stipitis:411

G3J7I6              	100.00%		A3LZS7              	100.00%
Bootstrap support for G3J7I6 as seed ortholog is 100%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #813. Best score 411 bits
Score difference with first non-orthologous sequence - C.militaris:287 S.stipitis:411

G3JJB3              	100.00%		A3LPQ3              	100.00%
Bootstrap support for G3JJB3 as seed ortholog is 100%.
Bootstrap support for A3LPQ3 as seed ortholog is 100%.

Group of orthologs #814. Best score 411 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3JST8              	100.00%		A3LUM6              	100.00%
Bootstrap support for G3JST8 as seed ortholog is 100%.
Bootstrap support for A3LUM6 as seed ortholog is 100%.

Group of orthologs #815. Best score 410 bits
Score difference with first non-orthologous sequence - C.militaris:410 S.stipitis:410

G3JSZ1              	100.00%		A3LNJ9              	100.00%
Bootstrap support for G3JSZ1 as seed ortholog is 100%.
Bootstrap support for A3LNJ9 as seed ortholog is 100%.

Group of orthologs #816. Best score 410 bits
Score difference with first non-orthologous sequence - C.militaris:410 S.stipitis:410

G3JU15              	100.00%		A3LT02              	100.00%
Bootstrap support for G3JU15 as seed ortholog is 100%.
Bootstrap support for A3LT02 as seed ortholog is 100%.

Group of orthologs #817. Best score 409 bits
Score difference with first non-orthologous sequence - C.militaris:409 S.stipitis:409

G3JD89              	100.00%		A3LS11              	100.00%
Bootstrap support for G3JD89 as seed ortholog is 100%.
Bootstrap support for A3LS11 as seed ortholog is 100%.

Group of orthologs #818. Best score 408 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:199

G3JKE7              	100.00%		A3LNL1              	100.00%
Bootstrap support for G3JKE7 as seed ortholog is 99%.
Bootstrap support for A3LNL1 as seed ortholog is 100%.

Group of orthologs #819. Best score 408 bits
Score difference with first non-orthologous sequence - C.militaris:408 S.stipitis:408

G3JRW9              	100.00%		A3LS81              	100.00%
Bootstrap support for G3JRW9 as seed ortholog is 100%.
Bootstrap support for A3LS81 as seed ortholog is 100%.

Group of orthologs #820. Best score 407 bits
Score difference with first non-orthologous sequence - C.militaris:407 S.stipitis:407

G3JTP5              	100.00%		A3LXY4              	100.00%
Bootstrap support for G3JTP5 as seed ortholog is 100%.
Bootstrap support for A3LXY4 as seed ortholog is 100%.

Group of orthologs #821. Best score 406 bits
Score difference with first non-orthologous sequence - C.militaris:53 S.stipitis:406

G3J4W2              	100.00%		A3LSF2              	100.00%
Bootstrap support for G3J4W2 as seed ortholog is 76%.
Bootstrap support for A3LSF2 as seed ortholog is 100%.

Group of orthologs #822. Best score 406 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:406

G3JN96              	100.00%		A3LQQ0              	100.00%
Bootstrap support for G3JN96 as seed ortholog is 99%.
Bootstrap support for A3LQQ0 as seed ortholog is 100%.

Group of orthologs #823. Best score 405 bits
Score difference with first non-orthologous sequence - C.militaris:405 S.stipitis:405

G3JU27              	100.00%		A3LR66              	100.00%
Bootstrap support for G3JU27 as seed ortholog is 100%.
Bootstrap support for A3LR66 as seed ortholog is 100%.

Group of orthologs #824. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:224

G3JRW0              	100.00%		A3GG74              	100.00%
                    	       		A3GHV7              	41.94%
Bootstrap support for G3JRW0 as seed ortholog is 99%.
Bootstrap support for A3GG74 as seed ortholog is 99%.

Group of orthologs #825. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:404 S.stipitis:404

G3J4G2              	100.00%		A3LQN6              	100.00%
Bootstrap support for G3J4G2 as seed ortholog is 100%.
Bootstrap support for A3LQN6 as seed ortholog is 100%.

Group of orthologs #826. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:404 S.stipitis:404

G3J7A5              	100.00%		A3LXV1              	100.00%
Bootstrap support for G3J7A5 as seed ortholog is 100%.
Bootstrap support for A3LXV1 as seed ortholog is 100%.

Group of orthologs #827. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:331 S.stipitis:404

G3JL05              	100.00%		A3LTV4              	100.00%
Bootstrap support for G3JL05 as seed ortholog is 100%.
Bootstrap support for A3LTV4 as seed ortholog is 100%.

Group of orthologs #828. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:404 S.stipitis:172

G3JTH2              	100.00%		A3LXV8              	100.00%
Bootstrap support for G3JTH2 as seed ortholog is 100%.
Bootstrap support for A3LXV8 as seed ortholog is 99%.

Group of orthologs #829. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:404 S.stipitis:404

G3JSS7              	100.00%		A3LZR6              	100.00%
Bootstrap support for G3JSS7 as seed ortholog is 100%.
Bootstrap support for A3LZR6 as seed ortholog is 100%.

Group of orthologs #830. Best score 404 bits
Score difference with first non-orthologous sequence - C.militaris:404 S.stipitis:404

G3JU81              	100.00%		A3M0J9              	100.00%
Bootstrap support for G3JU81 as seed ortholog is 100%.
Bootstrap support for A3M0J9 as seed ortholog is 100%.

Group of orthologs #831. Best score 403 bits
Score difference with first non-orthologous sequence - C.militaris:403 S.stipitis:403

G3JV25              	100.00%		A3LPV0              	100.00%
Bootstrap support for G3JV25 as seed ortholog is 100%.
Bootstrap support for A3LPV0 as seed ortholog is 100%.

Group of orthologs #832. Best score 402 bits
Score difference with first non-orthologous sequence - C.militaris:402 S.stipitis:402

G3JAU2              	100.00%		A3GIC7              	100.00%
Bootstrap support for G3JAU2 as seed ortholog is 100%.
Bootstrap support for A3GIC7 as seed ortholog is 100%.

Group of orthologs #833. Best score 402 bits
Score difference with first non-orthologous sequence - C.militaris:402 S.stipitis:402

G3JQY5              	100.00%		A3GGN7              	100.00%
Bootstrap support for G3JQY5 as seed ortholog is 100%.
Bootstrap support for A3GGN7 as seed ortholog is 100%.

Group of orthologs #834. Best score 402 bits
Score difference with first non-orthologous sequence - C.militaris:402 S.stipitis:402

G3JJR9              	100.00%		A3LUZ0              	100.00%
Bootstrap support for G3JJR9 as seed ortholog is 100%.
Bootstrap support for A3LUZ0 as seed ortholog is 100%.

Group of orthologs #835. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 S.stipitis:401

G3J2N0              	100.00%		A3LQH3              	100.00%
Bootstrap support for G3J2N0 as seed ortholog is 100%.
Bootstrap support for A3LQH3 as seed ortholog is 100%.

Group of orthologs #836. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 S.stipitis:401

G3J778              	100.00%		A3LX31              	100.00%
Bootstrap support for G3J778 as seed ortholog is 100%.
Bootstrap support for A3LX31 as seed ortholog is 100%.

Group of orthologs #837. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 S.stipitis:401

G3JJM2              	100.00%		A3LVL9              	100.00%
Bootstrap support for G3JJM2 as seed ortholog is 100%.
Bootstrap support for A3LVL9 as seed ortholog is 100%.

Group of orthologs #838. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 S.stipitis:401

G3JM02              	100.00%		A3M027              	100.00%
Bootstrap support for G3JM02 as seed ortholog is 100%.
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #839. Best score 400 bits
Score difference with first non-orthologous sequence - C.militaris:318 S.stipitis:400

G3JQC8              	100.00%		A3LUY3              	100.00%
G3JNC7              	38.56%		
G3JS17              	26.56%		
Bootstrap support for G3JQC8 as seed ortholog is 100%.
Bootstrap support for A3LUY3 as seed ortholog is 100%.

Group of orthologs #840. Best score 400 bits
Score difference with first non-orthologous sequence - C.militaris:400 S.stipitis:400

G3JNY8              	100.00%		A3GF88              	100.00%
Bootstrap support for G3JNY8 as seed ortholog is 100%.
Bootstrap support for A3GF88 as seed ortholog is 100%.

Group of orthologs #841. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:399

G3JPY9              	100.00%		A3LWD6              	100.00%
                    	       		A3LWD5              	64.31%
                    	       		A3GFF7              	17.39%
Bootstrap support for G3JPY9 as seed ortholog is 100%.
Bootstrap support for A3LWD6 as seed ortholog is 100%.

Group of orthologs #842. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:162

G3J828              	100.00%		A3LQQ5              	100.00%
G3JF82              	7.27%		
Bootstrap support for G3J828 as seed ortholog is 99%.
Bootstrap support for A3LQQ5 as seed ortholog is 99%.

Group of orthologs #843. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:117

G3JF43              	100.00%		A3LSF3              	100.00%
G3J4K3              	42.35%		
Bootstrap support for G3JF43 as seed ortholog is 96%.
Bootstrap support for A3LSF3 as seed ortholog is 99%.

Group of orthologs #844. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:399 S.stipitis:399

G3JA18              	100.00%		A3LUL1              	100.00%
Bootstrap support for G3JA18 as seed ortholog is 100%.
Bootstrap support for A3LUL1 as seed ortholog is 100%.

Group of orthologs #845. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:399 S.stipitis:399

G3J894              	100.00%		A3LYF6              	100.00%
Bootstrap support for G3J894 as seed ortholog is 100%.
Bootstrap support for A3LYF6 as seed ortholog is 100%.

Group of orthologs #846. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:399

G3JTN3              	100.00%		A3LN37              	100.00%
Bootstrap support for G3JTN3 as seed ortholog is 90%.
Bootstrap support for A3LN37 as seed ortholog is 100%.

Group of orthologs #847. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:398 S.stipitis:398

G3JD05              	100.00%		A3LQW6              	100.00%
Bootstrap support for G3JD05 as seed ortholog is 100%.
Bootstrap support for A3LQW6 as seed ortholog is 100%.

Group of orthologs #848. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:398 S.stipitis:398

G3JHD3              	100.00%		A3LU60              	100.00%
Bootstrap support for G3JHD3 as seed ortholog is 100%.
Bootstrap support for A3LU60 as seed ortholog is 100%.

Group of orthologs #849. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:398 S.stipitis:398

G3JHJ3              	100.00%		A3LUY5              	100.00%
Bootstrap support for G3JHJ3 as seed ortholog is 100%.
Bootstrap support for A3LUY5 as seed ortholog is 100%.

Group of orthologs #850. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:398 S.stipitis:398

G3JPP9              	100.00%		A3LPR3              	100.00%
Bootstrap support for G3JPP9 as seed ortholog is 100%.
Bootstrap support for A3LPR3 as seed ortholog is 100%.

Group of orthologs #851. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:322 S.stipitis:322

G3JJ86              	100.00%		A3LW11              	100.00%
Bootstrap support for G3JJ86 as seed ortholog is 100%.
Bootstrap support for A3LW11 as seed ortholog is 100%.

Group of orthologs #852. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:398 S.stipitis:398

G3JJX9              	100.00%		A3LZP8              	100.00%
Bootstrap support for G3JJX9 as seed ortholog is 100%.
Bootstrap support for A3LZP8 as seed ortholog is 100%.

Group of orthologs #853. Best score 398 bits
Score difference with first non-orthologous sequence - C.militaris:398 S.stipitis:398

G3JR21              	100.00%		A3LWI9              	100.00%
Bootstrap support for G3JR21 as seed ortholog is 100%.
Bootstrap support for A3LWI9 as seed ortholog is 100%.

Group of orthologs #854. Best score 397 bits
Score difference with first non-orthologous sequence - C.militaris:397 S.stipitis:397

G3J4E3              	100.00%		A3GGX3              	100.00%
Bootstrap support for G3J4E3 as seed ortholog is 100%.
Bootstrap support for A3GGX3 as seed ortholog is 100%.

Group of orthologs #855. Best score 397 bits
Score difference with first non-orthologous sequence - C.militaris:397 S.stipitis:125

G3J4T3              	100.00%		A3LYB2              	100.00%
Bootstrap support for G3J4T3 as seed ortholog is 100%.
Bootstrap support for A3LYB2 as seed ortholog is 99%.

Group of orthologs #856. Best score 397 bits
Score difference with first non-orthologous sequence - C.militaris:397 S.stipitis:397

G3JKL5              	100.00%		A3GI26              	100.00%
Bootstrap support for G3JKL5 as seed ortholog is 100%.
Bootstrap support for A3GI26 as seed ortholog is 100%.

Group of orthologs #857. Best score 397 bits
Score difference with first non-orthologous sequence - C.militaris:397 S.stipitis:397

G3JC02              	100.00%		A3LZI8              	100.00%
Bootstrap support for G3JC02 as seed ortholog is 100%.
Bootstrap support for A3LZI8 as seed ortholog is 100%.

Group of orthologs #858. Best score 397 bits
Score difference with first non-orthologous sequence - C.militaris:226 S.stipitis:258

G3JV31              	100.00%		A3LUB9              	100.00%
Bootstrap support for G3JV31 as seed ortholog is 100%.
Bootstrap support for A3LUB9 as seed ortholog is 100%.

Group of orthologs #859. Best score 396 bits
Score difference with first non-orthologous sequence - C.militaris:396 S.stipitis:396

G3JRC2              	100.00%		A3LTA9              	100.00%
G3J6I1              	6.50%		
Bootstrap support for G3JRC2 as seed ortholog is 100%.
Bootstrap support for A3LTA9 as seed ortholog is 100%.

Group of orthologs #860. Best score 396 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JCX7              	100.00%		A3LNZ4              	100.00%
Bootstrap support for G3JCX7 as seed ortholog is 100%.
Bootstrap support for A3LNZ4 as seed ortholog is 100%.

Group of orthologs #861. Best score 396 bits
Score difference with first non-orthologous sequence - C.militaris:396 S.stipitis:335

G3JG22              	100.00%		A3LZ87              	100.00%
Bootstrap support for G3JG22 as seed ortholog is 100%.
Bootstrap support for A3LZ87 as seed ortholog is 100%.

Group of orthologs #862. Best score 396 bits
Score difference with first non-orthologous sequence - C.militaris:396 S.stipitis:396

G3JLQ0              	100.00%		A3LWJ5              	100.00%
Bootstrap support for G3JLQ0 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #863. Best score 396 bits
Score difference with first non-orthologous sequence - C.militaris:396 S.stipitis:396

G3JJU8              	100.00%		A3LYN5              	100.00%
Bootstrap support for G3JJU8 as seed ortholog is 100%.
Bootstrap support for A3LYN5 as seed ortholog is 100%.

Group of orthologs #864. Best score 395 bits
Score difference with first non-orthologous sequence - C.militaris:21 S.stipitis:395

G3JHJ1              	100.00%		A3LQE5              	100.00%
Bootstrap support for G3JHJ1 as seed ortholog is 77%.
Bootstrap support for A3LQE5 as seed ortholog is 100%.

Group of orthologs #865. Best score 395 bits
Score difference with first non-orthologous sequence - C.militaris:395 S.stipitis:395

G3JPX8              	100.00%		A3LVD0              	100.00%
Bootstrap support for G3JPX8 as seed ortholog is 100%.
Bootstrap support for A3LVD0 as seed ortholog is 100%.

Group of orthologs #866. Best score 394 bits
Score difference with first non-orthologous sequence - C.militaris:394 S.stipitis:394

G3J438              	100.00%		A3LXH8              	100.00%
Bootstrap support for G3J438 as seed ortholog is 100%.
Bootstrap support for A3LXH8 as seed ortholog is 100%.

Group of orthologs #867. Best score 394 bits
Score difference with first non-orthologous sequence - C.militaris:394 S.stipitis:394

G3JFW2              	100.00%		A3LRU3              	100.00%
Bootstrap support for G3JFW2 as seed ortholog is 100%.
Bootstrap support for A3LRU3 as seed ortholog is 100%.

Group of orthologs #868. Best score 394 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:169

G3JR27              	100.00%		A3LTS7              	100.00%
Bootstrap support for G3JR27 as seed ortholog is 99%.
Bootstrap support for A3LTS7 as seed ortholog is 99%.

Group of orthologs #869. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:316 S.stipitis:393

G3J3L1              	100.00%		A3GEU3              	100.00%
Bootstrap support for G3J3L1 as seed ortholog is 100%.
Bootstrap support for A3GEU3 as seed ortholog is 100%.

Group of orthologs #870. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 S.stipitis:393

G3JG30              	100.00%		A3GFN3              	100.00%
Bootstrap support for G3JG30 as seed ortholog is 100%.
Bootstrap support for A3GFN3 as seed ortholog is 100%.

Group of orthologs #871. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:326 S.stipitis:297

G3JF49              	100.00%		A3LP75              	100.00%
Bootstrap support for G3JF49 as seed ortholog is 100%.
Bootstrap support for A3LP75 as seed ortholog is 100%.

Group of orthologs #872. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 S.stipitis:393

G3JHU4              	100.00%		A3GHP9              	100.00%
Bootstrap support for G3JHU4 as seed ortholog is 100%.
Bootstrap support for A3GHP9 as seed ortholog is 100%.

Group of orthologs #873. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:265 S.stipitis:393

G3JCN5              	100.00%		O94114              	100.00%
Bootstrap support for G3JCN5 as seed ortholog is 100%.
Bootstrap support for O94114 as seed ortholog is 100%.

Group of orthologs #874. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:212

G3JKG5              	100.00%		A3LV01              	100.00%
Bootstrap support for G3JKG5 as seed ortholog is 100%.
Bootstrap support for A3LV01 as seed ortholog is 100%.

Group of orthologs #875. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 S.stipitis:393

G3JQ08              	100.00%		A3LRR0              	100.00%
Bootstrap support for G3JQ08 as seed ortholog is 100%.
Bootstrap support for A3LRR0 as seed ortholog is 100%.

Group of orthologs #876. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 S.stipitis:393

G3JUA4              	100.00%		A3LXW6              	100.00%
Bootstrap support for G3JUA4 as seed ortholog is 100%.
Bootstrap support for A3LXW6 as seed ortholog is 100%.

Group of orthologs #877. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:392 S.stipitis:392

G3J2S1              	100.00%		A3LY99              	100.00%
Bootstrap support for G3J2S1 as seed ortholog is 100%.
Bootstrap support for A3LY99 as seed ortholog is 100%.

Group of orthologs #878. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:392 S.stipitis:392

G3JF68              	100.00%		A3GGK9              	100.00%
Bootstrap support for G3JF68 as seed ortholog is 100%.
Bootstrap support for A3GGK9 as seed ortholog is 100%.

Group of orthologs #879. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:392 S.stipitis:212

G3J2M6              	100.00%		A3M055              	100.00%
Bootstrap support for G3J2M6 as seed ortholog is 100%.
Bootstrap support for A3M055 as seed ortholog is 100%.

Group of orthologs #880. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:392 S.stipitis:392

G3JD43              	100.00%		A3M0F9              	100.00%
Bootstrap support for G3JD43 as seed ortholog is 100%.
Bootstrap support for A3M0F9 as seed ortholog is 100%.

Group of orthologs #881. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:7 S.stipitis:120

G3JQV4              	100.00%		A3LSQ4              	100.00%
Bootstrap support for G3JQV4 as seed ortholog is 56%.
Alternative seed ortholog is G3JBI3 (7 bits away from this cluster)
Bootstrap support for A3LSQ4 as seed ortholog is 99%.

Group of orthologs #882. Best score 390 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:107

G3J9C3              	100.00%		A3GET0              	100.00%
                    	       		A3LSN9              	65.21%
Bootstrap support for G3J9C3 as seed ortholog is 99%.
Bootstrap support for A3GET0 as seed ortholog is 99%.

Group of orthologs #883. Best score 390 bits
Score difference with first non-orthologous sequence - C.militaris:390 S.stipitis:390

G3JJP0              	100.00%		A3LP33              	100.00%
Bootstrap support for G3JJP0 as seed ortholog is 100%.
Bootstrap support for A3LP33 as seed ortholog is 100%.

Group of orthologs #884. Best score 389 bits
Score difference with first non-orthologous sequence - C.militaris:389 S.stipitis:389

G3JDF3              	100.00%		A3LTY5              	100.00%
Bootstrap support for G3JDF3 as seed ortholog is 100%.
Bootstrap support for A3LTY5 as seed ortholog is 100%.

Group of orthologs #885. Best score 389 bits
Score difference with first non-orthologous sequence - C.militaris:389 S.stipitis:389

G3JRD0              	100.00%		A3LSU9              	100.00%
Bootstrap support for G3JRD0 as seed ortholog is 100%.
Bootstrap support for A3LSU9 as seed ortholog is 100%.

Group of orthologs #886. Best score 389 bits
Score difference with first non-orthologous sequence - C.militaris:389 S.stipitis:389

G3JP44              	100.00%		A3LX74              	100.00%
Bootstrap support for G3JP44 as seed ortholog is 100%.
Bootstrap support for A3LX74 as seed ortholog is 100%.

Group of orthologs #887. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:388

G3JQU8              	100.00%		A3LSP0              	100.00%
G3JD19              	5.39%		A3LS01              	44.86%
                    	       		A3LR60              	28.40%
                    	       		A3LRT5              	27.49%
                    	       		A3LZV9              	14.35%
Bootstrap support for G3JQU8 as seed ortholog is 99%.
Bootstrap support for A3LSP0 as seed ortholog is 100%.

Group of orthologs #888. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:324 S.stipitis:388

G3JIX0              	100.00%		A3LP27              	100.00%
G3JS48              	31.13%		
Bootstrap support for G3JIX0 as seed ortholog is 100%.
Bootstrap support for A3LP27 as seed ortholog is 100%.

Group of orthologs #889. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:328

G3JLD1              	100.00%		A3LU37              	100.00%
Bootstrap support for G3JLD1 as seed ortholog is 100%.
Bootstrap support for A3LU37 as seed ortholog is 100%.

Group of orthologs #890. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:388 S.stipitis:388

G3JL30              	100.00%		A3LZZ8              	100.00%
Bootstrap support for G3JL30 as seed ortholog is 100%.
Bootstrap support for A3LZZ8 as seed ortholog is 100%.

Group of orthologs #891. Best score 387 bits
Score difference with first non-orthologous sequence - C.militaris:387 S.stipitis:387

G3JNC9              	100.00%		A3LNH5              	100.00%
Bootstrap support for G3JNC9 as seed ortholog is 100%.
Bootstrap support for A3LNH5 as seed ortholog is 100%.

Group of orthologs #892. Best score 387 bits
Score difference with first non-orthologous sequence - C.militaris:387 S.stipitis:274

G3JTK8              	100.00%		A3LRQ9              	100.00%
Bootstrap support for G3JTK8 as seed ortholog is 100%.
Bootstrap support for A3LRQ9 as seed ortholog is 100%.

Group of orthologs #893. Best score 386 bits
Score difference with first non-orthologous sequence - C.militaris:386 S.stipitis:386

G3JCX3              	100.00%		A3LPZ2              	100.00%
Bootstrap support for G3JCX3 as seed ortholog is 100%.
Bootstrap support for A3LPZ2 as seed ortholog is 100%.

Group of orthologs #894. Best score 386 bits
Score difference with first non-orthologous sequence - C.militaris:386 S.stipitis:386

G3JE00              	100.00%		A3LUH4              	100.00%
Bootstrap support for G3JE00 as seed ortholog is 100%.
Bootstrap support for A3LUH4 as seed ortholog is 100%.

Group of orthologs #895. Best score 386 bits
Score difference with first non-orthologous sequence - C.militaris:386 S.stipitis:207

G3JJE5              	100.00%		A3LUV3              	100.00%
Bootstrap support for G3JJE5 as seed ortholog is 100%.
Bootstrap support for A3LUV3 as seed ortholog is 99%.

Group of orthologs #896. Best score 385 bits
Score difference with first non-orthologous sequence - C.militaris:385 S.stipitis:385

G3J3X2              	100.00%		A3LPT4              	100.00%
Bootstrap support for G3J3X2 as seed ortholog is 100%.
Bootstrap support for A3LPT4 as seed ortholog is 100%.

Group of orthologs #897. Best score 385 bits
Score difference with first non-orthologous sequence - C.militaris:385 S.stipitis:385

G3J999              	100.00%		A3LVY9              	100.00%
Bootstrap support for G3J999 as seed ortholog is 100%.
Bootstrap support for A3LVY9 as seed ortholog is 100%.

Group of orthologs #898. Best score 385 bits
Score difference with first non-orthologous sequence - C.militaris:385 S.stipitis:385

G3JPY0              	100.00%		A3LZU4              	100.00%
Bootstrap support for G3JPY0 as seed ortholog is 100%.
Bootstrap support for A3LZU4 as seed ortholog is 100%.

Group of orthologs #899. Best score 384 bits
Score difference with first non-orthologous sequence - C.militaris:384 S.stipitis:384

G3JE68              	100.00%		A3LV69              	100.00%
                    	       		A3GGA9              	9.78%
Bootstrap support for G3JE68 as seed ortholog is 100%.
Bootstrap support for A3LV69 as seed ortholog is 100%.

Group of orthologs #900. Best score 384 bits
Score difference with first non-orthologous sequence - C.militaris:34 S.stipitis:384

G3JNL2              	100.00%		A3LQQ9              	100.00%
                    	       		A3LV79              	88.11%
Bootstrap support for G3JNL2 as seed ortholog is 76%.
Bootstrap support for A3LQQ9 as seed ortholog is 100%.

Group of orthologs #901. Best score 384 bits
Score difference with first non-orthologous sequence - C.militaris:384 S.stipitis:384

G3J2P7              	100.00%		A3LWB2              	100.00%
Bootstrap support for G3J2P7 as seed ortholog is 100%.
Bootstrap support for A3LWB2 as seed ortholog is 100%.

Group of orthologs #902. Best score 384 bits
Score difference with first non-orthologous sequence - C.militaris:291 S.stipitis:384

G3J789              	100.00%		A3LZA2              	100.00%
Bootstrap support for G3J789 as seed ortholog is 100%.
Bootstrap support for A3LZA2 as seed ortholog is 100%.

Group of orthologs #903. Best score 384 bits
Score difference with first non-orthologous sequence - C.militaris:384 S.stipitis:384

G3JM14              	100.00%		A3GF56              	100.00%
Bootstrap support for G3JM14 as seed ortholog is 100%.
Bootstrap support for A3GF56 as seed ortholog is 100%.

Group of orthologs #904. Best score 384 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:210

G3JCB2              	100.00%		A3LWF4              	100.00%
Bootstrap support for G3JCB2 as seed ortholog is 99%.
Bootstrap support for A3LWF4 as seed ortholog is 99%.

Group of orthologs #905. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:383 S.stipitis:383

G3J9F4              	100.00%		A3LU92              	100.00%
Bootstrap support for G3J9F4 as seed ortholog is 100%.
Bootstrap support for A3LU92 as seed ortholog is 100%.

Group of orthologs #906. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:383 S.stipitis:383

G3J6S2              	100.00%		A3LXT8              	100.00%
Bootstrap support for G3J6S2 as seed ortholog is 100%.
Bootstrap support for A3LXT8 as seed ortholog is 100%.

Group of orthologs #907. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:324 S.stipitis:383

G3JIA3              	100.00%		A3GI13              	100.00%
Bootstrap support for G3JIA3 as seed ortholog is 100%.
Bootstrap support for A3GI13 as seed ortholog is 100%.

Group of orthologs #908. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:383

G3JJ77              	100.00%		A3LQ02              	100.00%
Bootstrap support for G3JJ77 as seed ortholog is 97%.
Bootstrap support for A3LQ02 as seed ortholog is 100%.

Group of orthologs #909. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:237

G3JGL2              	100.00%		A3LVE8              	100.00%
Bootstrap support for G3JGL2 as seed ortholog is 94%.
Bootstrap support for A3LVE8 as seed ortholog is 100%.

Group of orthologs #910. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:383 S.stipitis:201

G3JKU1              	100.00%		A3LZB1              	100.00%
Bootstrap support for G3JKU1 as seed ortholog is 100%.
Bootstrap support for A3LZB1 as seed ortholog is 99%.

Group of orthologs #911. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:219 S.stipitis:288

G3JTT5              	100.00%		A3LTB4              	100.00%
Bootstrap support for G3JTT5 as seed ortholog is 100%.
Bootstrap support for A3LTB4 as seed ortholog is 100%.

Group of orthologs #912. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:332 S.stipitis:383

G3JQJ3              	100.00%		A3LYA4              	100.00%
Bootstrap support for G3JQJ3 as seed ortholog is 100%.
Bootstrap support for A3LYA4 as seed ortholog is 100%.

Group of orthologs #913. Best score 382 bits
Score difference with first non-orthologous sequence - C.militaris:382 S.stipitis:382

G3J442              	100.00%		A3LTF7              	100.00%
Bootstrap support for G3J442 as seed ortholog is 100%.
Bootstrap support for A3LTF7 as seed ortholog is 100%.

Group of orthologs #914. Best score 382 bits
Score difference with first non-orthologous sequence - C.militaris:382 S.stipitis:382

G3J9G3              	100.00%		A3LRV4              	100.00%
Bootstrap support for G3J9G3 as seed ortholog is 100%.
Bootstrap support for A3LRV4 as seed ortholog is 100%.

Group of orthologs #915. Best score 382 bits
Score difference with first non-orthologous sequence - C.militaris:382 S.stipitis:382

G3JBK2              	100.00%		A3LRB4              	100.00%
Bootstrap support for G3JBK2 as seed ortholog is 100%.
Bootstrap support for A3LRB4 as seed ortholog is 100%.

Group of orthologs #916. Best score 382 bits
Score difference with first non-orthologous sequence - C.militaris:382 S.stipitis:382

G3JQC2              	100.00%		A3LPI5              	100.00%
Bootstrap support for G3JQC2 as seed ortholog is 100%.
Bootstrap support for A3LPI5 as seed ortholog is 100%.

Group of orthologs #917. Best score 382 bits
Score difference with first non-orthologous sequence - C.militaris:382 S.stipitis:382

G3JPM7              	100.00%		A3LYT2              	100.00%
Bootstrap support for G3JPM7 as seed ortholog is 100%.
Bootstrap support for A3LYT2 as seed ortholog is 100%.

Group of orthologs #918. Best score 381 bits
Score difference with first non-orthologous sequence - C.militaris:381 S.stipitis:381

G3J3E1              	100.00%		A3GI57              	100.00%
Bootstrap support for G3J3E1 as seed ortholog is 100%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #919. Best score 381 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:194

G3J5L8              	100.00%		A3GG58              	100.00%
Bootstrap support for G3J5L8 as seed ortholog is 99%.
Bootstrap support for A3GG58 as seed ortholog is 99%.

Group of orthologs #920. Best score 381 bits
Score difference with first non-orthologous sequence - C.militaris:381 S.stipitis:381

G3J9K5              	100.00%		A3LZY3              	100.00%
Bootstrap support for G3J9K5 as seed ortholog is 100%.
Bootstrap support for A3LZY3 as seed ortholog is 100%.

Group of orthologs #921. Best score 381 bits
Score difference with first non-orthologous sequence - C.militaris:381 S.stipitis:381

G3JR85              	100.00%		A3LPI4              	100.00%
Bootstrap support for G3JR85 as seed ortholog is 100%.
Bootstrap support for A3LPI4 as seed ortholog is 100%.

Group of orthologs #922. Best score 380 bits
Score difference with first non-orthologous sequence - C.militaris:306 S.stipitis:380

G3JAP1              	100.00%		A3LPZ8              	100.00%
Bootstrap support for G3JAP1 as seed ortholog is 100%.
Bootstrap support for A3LPZ8 as seed ortholog is 100%.

Group of orthologs #923. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:379 S.stipitis:379

G3J8K3              	100.00%		A3LUH6              	100.00%
Bootstrap support for G3J8K3 as seed ortholog is 100%.
Bootstrap support for A3LUH6 as seed ortholog is 100%.

Group of orthologs #924. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:379 S.stipitis:333

G3JK38              	100.00%		A3GGB8              	100.00%
Bootstrap support for G3JK38 as seed ortholog is 100%.
Bootstrap support for A3GGB8 as seed ortholog is 100%.

Group of orthologs #925. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:379 S.stipitis:379

G3JEN1              	100.00%		A3M0D8              	100.00%
Bootstrap support for G3JEN1 as seed ortholog is 100%.
Bootstrap support for A3M0D8 as seed ortholog is 100%.

Group of orthologs #926. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:379 S.stipitis:185

G3JH58              	100.00%		A3LZZ6              	100.00%
Bootstrap support for G3JH58 as seed ortholog is 100%.
Bootstrap support for A3LZZ6 as seed ortholog is 99%.

Group of orthologs #927. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:378

G3JDJ6              	100.00%		A3LXR5              	100.00%
Bootstrap support for G3JDJ6 as seed ortholog is 99%.
Bootstrap support for A3LXR5 as seed ortholog is 100%.

Group of orthologs #928. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:378 S.stipitis:378

G3JRK5              	100.00%		A3GGL1              	100.00%
Bootstrap support for G3JRK5 as seed ortholog is 100%.
Bootstrap support for A3GGL1 as seed ortholog is 100%.

Group of orthologs #929. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:313

G3JSQ6              	100.00%		A3LPK1              	100.00%
Bootstrap support for G3JSQ6 as seed ortholog is 99%.
Bootstrap support for A3LPK1 as seed ortholog is 100%.

Group of orthologs #930. Best score 377 bits
Score difference with first non-orthologous sequence - C.militaris:377 S.stipitis:377

G3JSJ7              	100.00%		A3LT24              	100.00%
G3JGX6              	33.71%		A3LPC6              	64.92%
                    	       		A3LVT4              	26.00%
                    	       		A3LZE8              	20.33%
                    	       		A3LPV7              	17.63%
Bootstrap support for G3JSJ7 as seed ortholog is 100%.
Bootstrap support for A3LT24 as seed ortholog is 100%.

Group of orthologs #931. Best score 377 bits
Score difference with first non-orthologous sequence - C.militaris:377 S.stipitis:377

G3J352              	100.00%		A3LYP7              	100.00%
Bootstrap support for G3J352 as seed ortholog is 100%.
Bootstrap support for A3LYP7 as seed ortholog is 100%.

Group of orthologs #932. Best score 377 bits
Score difference with first non-orthologous sequence - C.militaris:377 S.stipitis:377

G3JAL8              	100.00%		A3LS37              	100.00%
Bootstrap support for G3JAL8 as seed ortholog is 100%.
Bootstrap support for A3LS37 as seed ortholog is 100%.

Group of orthologs #933. Best score 377 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:377

G3J5S5              	100.00%		A3LY03              	100.00%
Bootstrap support for G3J5S5 as seed ortholog is 100%.
Bootstrap support for A3LY03 as seed ortholog is 100%.

Group of orthologs #934. Best score 377 bits
Score difference with first non-orthologous sequence - C.militaris:377 S.stipitis:377

G3JQ18              	100.00%		A3M0F8              	100.00%
Bootstrap support for G3JQ18 as seed ortholog is 100%.
Bootstrap support for A3M0F8 as seed ortholog is 100%.

Group of orthologs #935. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:376 S.stipitis:95

G3JHX0              	100.00%		A3GGT8              	100.00%
                    	       		A3LXM5              	56.70%
Bootstrap support for G3JHX0 as seed ortholog is 100%.
Bootstrap support for A3GGT8 as seed ortholog is 99%.

Group of orthologs #936. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:376 S.stipitis:376

G3JHC3              	100.00%		A3LZV4              	100.00%
Bootstrap support for G3JHC3 as seed ortholog is 100%.
Bootstrap support for A3LZV4 as seed ortholog is 100%.

Group of orthologs #937. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:376 S.stipitis:376

G3JV06              	100.00%		A3LU31              	100.00%
Bootstrap support for G3JV06 as seed ortholog is 100%.
Bootstrap support for A3LU31 as seed ortholog is 100%.

Group of orthologs #938. Best score 375 bits
Score difference with first non-orthologous sequence - C.militaris:375 S.stipitis:375

G3JHQ2              	100.00%		A3GH67              	100.00%
Bootstrap support for G3JHQ2 as seed ortholog is 100%.
Bootstrap support for A3GH67 as seed ortholog is 100%.

Group of orthologs #939. Best score 375 bits
Score difference with first non-orthologous sequence - C.militaris:254 S.stipitis:140

G3J7L4              	100.00%		A3LYD0              	100.00%
Bootstrap support for G3J7L4 as seed ortholog is 100%.
Bootstrap support for A3LYD0 as seed ortholog is 99%.

Group of orthologs #940. Best score 375 bits
Score difference with first non-orthologous sequence - C.militaris:375 S.stipitis:375

G3JD61              	100.00%		A3LUD5              	100.00%
Bootstrap support for G3JD61 as seed ortholog is 100%.
Bootstrap support for A3LUD5 as seed ortholog is 100%.

Group of orthologs #941. Best score 375 bits
Score difference with first non-orthologous sequence - C.militaris:375 S.stipitis:375

G3JMT9              	100.00%		A3LW79              	100.00%
Bootstrap support for G3JMT9 as seed ortholog is 100%.
Bootstrap support for A3LW79 as seed ortholog is 100%.

Group of orthologs #942. Best score 374 bits
Score difference with first non-orthologous sequence - C.militaris:374 S.stipitis:374

G3JP51              	100.00%		A3LNS6              	100.00%
Bootstrap support for G3JP51 as seed ortholog is 100%.
Bootstrap support for A3LNS6 as seed ortholog is 100%.

Group of orthologs #943. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:373

G3J2W5              	100.00%		A3GFK7              	100.00%
Bootstrap support for G3J2W5 as seed ortholog is 100%.
Bootstrap support for A3GFK7 as seed ortholog is 100%.

Group of orthologs #944. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:373

G3J405              	100.00%		A3LZG8              	100.00%
Bootstrap support for G3J405 as seed ortholog is 100%.
Bootstrap support for A3LZG8 as seed ortholog is 100%.

Group of orthologs #945. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:373

G3J3T3              	100.00%		A3LZS3              	100.00%
Bootstrap support for G3J3T3 as seed ortholog is 100%.
Bootstrap support for A3LZS3 as seed ortholog is 100%.

Group of orthologs #946. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:373

G3JDE0              	100.00%		A3LRQ8              	100.00%
Bootstrap support for G3JDE0 as seed ortholog is 100%.
Bootstrap support for A3LRQ8 as seed ortholog is 100%.

Group of orthologs #947. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:373

G3JE42              	100.00%		A3LSV4              	100.00%
Bootstrap support for G3JE42 as seed ortholog is 100%.
Bootstrap support for A3LSV4 as seed ortholog is 100%.

Group of orthologs #948. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 S.stipitis:373

G3JHU9              	100.00%		A3LT07              	100.00%
Bootstrap support for G3JHU9 as seed ortholog is 100%.
Bootstrap support for A3LT07 as seed ortholog is 100%.

Group of orthologs #949. Best score 372 bits
Score difference with first non-orthologous sequence - C.militaris:372 S.stipitis:372

G3J4C0              	100.00%		A3GH30              	100.00%
Bootstrap support for G3J4C0 as seed ortholog is 100%.
Bootstrap support for A3GH30 as seed ortholog is 100%.

Group of orthologs #950. Best score 372 bits
Score difference with first non-orthologous sequence - C.militaris:372 S.stipitis:372

G3JGK1              	100.00%		A3LR80              	100.00%
Bootstrap support for G3JGK1 as seed ortholog is 100%.
Bootstrap support for A3LR80 as seed ortholog is 100%.

Group of orthologs #951. Best score 372 bits
Score difference with first non-orthologous sequence - C.militaris:372 S.stipitis:372

G3JGV2              	100.00%		A3LRF1              	100.00%
Bootstrap support for G3JGV2 as seed ortholog is 100%.
Bootstrap support for A3LRF1 as seed ortholog is 100%.

Group of orthologs #952. Best score 372 bits
Score difference with first non-orthologous sequence - C.militaris:372 S.stipitis:372

G3JTR8              	100.00%		A3LMU8              	100.00%
Bootstrap support for G3JTR8 as seed ortholog is 100%.
Bootstrap support for A3LMU8 as seed ortholog is 100%.

Group of orthologs #953. Best score 371 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:175

G3JCJ9              	100.00%		A3LW48              	100.00%
G3JUJ1              	13.21%		
Bootstrap support for G3JCJ9 as seed ortholog is 99%.
Bootstrap support for A3LW48 as seed ortholog is 99%.

Group of orthologs #954. Best score 371 bits
Score difference with first non-orthologous sequence - C.militaris:371 S.stipitis:371

G3JDR8              	100.00%		A3LPJ7              	100.00%
Bootstrap support for G3JDR8 as seed ortholog is 100%.
Bootstrap support for A3LPJ7 as seed ortholog is 100%.

Group of orthologs #955. Best score 371 bits
Score difference with first non-orthologous sequence - C.militaris:371 S.stipitis:371

G3JDX7              	100.00%		A3LVW8              	100.00%
Bootstrap support for G3JDX7 as seed ortholog is 100%.
Bootstrap support for A3LVW8 as seed ortholog is 100%.

Group of orthologs #956. Best score 370 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:22

G3JUG8              	100.00%		A3LPJ6              	100.00%
                    	       		A3LRU6              	51.74%
Bootstrap support for G3JUG8 as seed ortholog is 99%.
Bootstrap support for A3LPJ6 as seed ortholog is 71%.
Alternative seed ortholog is A3LNV3 (22 bits away from this cluster)

Group of orthologs #957. Best score 370 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:219

G3J991              	100.00%		A3LU79              	100.00%
Bootstrap support for G3J991 as seed ortholog is 100%.
Bootstrap support for A3LU79 as seed ortholog is 100%.

Group of orthologs #958. Best score 370 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:370

G3JDR3              	100.00%		A3LUA8              	100.00%
Bootstrap support for G3JDR3 as seed ortholog is 99%.
Bootstrap support for A3LUA8 as seed ortholog is 100%.

Group of orthologs #959. Best score 370 bits
Score difference with first non-orthologous sequence - C.militaris:370 S.stipitis:370

G3JL82              	100.00%		A3LRZ6              	100.00%
Bootstrap support for G3JL82 as seed ortholog is 100%.
Bootstrap support for A3LRZ6 as seed ortholog is 100%.

Group of orthologs #960. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 S.stipitis:369

G3JF96              	100.00%		A3GF76              	100.00%
G3JGF9              	18.31%		
Bootstrap support for G3JF96 as seed ortholog is 100%.
Bootstrap support for A3GF76 as seed ortholog is 100%.

Group of orthologs #961. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 S.stipitis:369

G3J4G0              	100.00%		A3LQE7              	100.00%
Bootstrap support for G3J4G0 as seed ortholog is 100%.
Bootstrap support for A3LQE7 as seed ortholog is 100%.

Group of orthologs #962. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 S.stipitis:369

G3JCE9              	100.00%		A3GG41              	100.00%
Bootstrap support for G3JCE9 as seed ortholog is 100%.
Bootstrap support for A3GG41 as seed ortholog is 100%.

Group of orthologs #963. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 S.stipitis:131

G3J7Q8              	100.00%		A3LWL7              	100.00%
Bootstrap support for G3J7Q8 as seed ortholog is 100%.
Bootstrap support for A3LWL7 as seed ortholog is 99%.

Group of orthologs #964. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 S.stipitis:369

G3JLL3              	100.00%		A3LSS6              	100.00%
Bootstrap support for G3JLL3 as seed ortholog is 100%.
Bootstrap support for A3LSS6 as seed ortholog is 100%.

Group of orthologs #965. Best score 368 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:153

G3J891              	100.00%		A3GHS8              	100.00%
                    	       		A3LT56              	71.14%
                    	       		A3LZ26              	55.83%
                    	       		A3LTP7              	53.12%
Bootstrap support for G3J891 as seed ortholog is 82%.
Bootstrap support for A3GHS8 as seed ortholog is 99%.

Group of orthologs #966. Best score 368 bits
Score difference with first non-orthologous sequence - C.militaris:368 S.stipitis:368

G3JQD2              	100.00%		A3LTQ5              	100.00%
Bootstrap support for G3JQD2 as seed ortholog is 100%.
Bootstrap support for A3LTQ5 as seed ortholog is 100%.

Group of orthologs #967. Best score 367 bits
Score difference with first non-orthologous sequence - C.militaris:367 S.stipitis:367

G3JC03              	100.00%		A3LMX2              	100.00%
Bootstrap support for G3JC03 as seed ortholog is 100%.
Bootstrap support for A3LMX2 as seed ortholog is 100%.

Group of orthologs #968. Best score 367 bits
Score difference with first non-orthologous sequence - C.militaris:367 S.stipitis:367

G3JQ73              	100.00%		A3LR21              	100.00%
Bootstrap support for G3JQ73 as seed ortholog is 100%.
Bootstrap support for A3LR21 as seed ortholog is 100%.

Group of orthologs #969. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:34 S.stipitis:116

G3JCU5              	100.00%		A3LUR4              	100.00%
                    	       		A3LUR5              	62.98%
                    	       		A3GHD8              	39.63%
Bootstrap support for G3JCU5 as seed ortholog is 75%.
Bootstrap support for A3LUR4 as seed ortholog is 99%.

Group of orthologs #970. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:262 S.stipitis:215

G3JBT7              	100.00%		A3GI29              	100.00%
G3JND0              	17.02%		
Bootstrap support for G3JBT7 as seed ortholog is 100%.
Bootstrap support for A3GI29 as seed ortholog is 99%.

Group of orthologs #971. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:366 S.stipitis:366

G3J6H0              	100.00%		A3LMS2              	100.00%
Bootstrap support for G3J6H0 as seed ortholog is 100%.
Bootstrap support for A3LMS2 as seed ortholog is 100%.

Group of orthologs #972. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:366 S.stipitis:366

G3JA92              	100.00%		A3LNB9              	100.00%
Bootstrap support for G3JA92 as seed ortholog is 100%.
Bootstrap support for A3LNB9 as seed ortholog is 100%.

Group of orthologs #973. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:366 S.stipitis:366

G3J3N6              	100.00%		A3M007              	100.00%
Bootstrap support for G3J3N6 as seed ortholog is 100%.
Bootstrap support for A3M007 as seed ortholog is 100%.

Group of orthologs #974. Best score 365 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:365

G3J3U5              	100.00%		A3LSE0              	100.00%
Bootstrap support for G3J3U5 as seed ortholog is 100%.
Bootstrap support for A3LSE0 as seed ortholog is 100%.

Group of orthologs #975. Best score 365 bits
Score difference with first non-orthologous sequence - C.militaris:365 S.stipitis:365

G3JMH4              	100.00%		A3LPA6              	100.00%
Bootstrap support for G3JMH4 as seed ortholog is 100%.
Bootstrap support for A3LPA6 as seed ortholog is 100%.

Group of orthologs #976. Best score 365 bits
Score difference with first non-orthologous sequence - C.militaris:365 S.stipitis:365

G3JMU0              	100.00%		A3LS13              	100.00%
Bootstrap support for G3JMU0 as seed ortholog is 100%.
Bootstrap support for A3LS13 as seed ortholog is 100%.

Group of orthologs #977. Best score 364 bits
Score difference with first non-orthologous sequence - C.militaris:364 S.stipitis:268

G3J728              	100.00%		A3LR42              	100.00%
Bootstrap support for G3J728 as seed ortholog is 100%.
Bootstrap support for A3LR42 as seed ortholog is 100%.

Group of orthologs #978. Best score 364 bits
Score difference with first non-orthologous sequence - C.militaris:293 S.stipitis:364

G3JDL8              	100.00%		A3LPU9              	100.00%
Bootstrap support for G3JDL8 as seed ortholog is 100%.
Bootstrap support for A3LPU9 as seed ortholog is 100%.

Group of orthologs #979. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 S.stipitis:363

G3JEE0              	100.00%		A3LX79              	100.00%
G3JTU2              	19.92%		
Bootstrap support for G3JEE0 as seed ortholog is 100%.
Bootstrap support for A3LX79 as seed ortholog is 100%.

Group of orthologs #980. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 S.stipitis:114

G3J3B2              	100.00%		A3GGP3              	100.00%
Bootstrap support for G3J3B2 as seed ortholog is 100%.
Bootstrap support for A3GGP3 as seed ortholog is 99%.

Group of orthologs #981. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 S.stipitis:363

G3J3E8              	100.00%		A3LRB1              	100.00%
Bootstrap support for G3J3E8 as seed ortholog is 100%.
Bootstrap support for A3LRB1 as seed ortholog is 100%.

Group of orthologs #982. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:363

G3J4G6              	100.00%		A3LZN4              	100.00%
Bootstrap support for G3J4G6 as seed ortholog is 100%.
Bootstrap support for A3LZN4 as seed ortholog is 100%.

Group of orthologs #983. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 S.stipitis:363

G3JTP0              	100.00%		A3LS92              	100.00%
Bootstrap support for G3JTP0 as seed ortholog is 100%.
Bootstrap support for A3LS92 as seed ortholog is 100%.

Group of orthologs #984. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3J2L0              	100.00%		A3LRL1              	100.00%
Bootstrap support for G3J2L0 as seed ortholog is 100%.
Bootstrap support for A3LRL1 as seed ortholog is 100%.

Group of orthologs #985. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3J9V4              	100.00%		A3GFS6              	100.00%
Bootstrap support for G3J9V4 as seed ortholog is 100%.
Bootstrap support for A3GFS6 as seed ortholog is 100%.

Group of orthologs #986. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3J6M2              	100.00%		A3LPU5              	100.00%
Bootstrap support for G3J6M2 as seed ortholog is 100%.
Bootstrap support for A3LPU5 as seed ortholog is 100%.

Group of orthologs #987. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3JBD8              	100.00%		A3LRF5              	100.00%
Bootstrap support for G3JBD8 as seed ortholog is 100%.
Bootstrap support for A3LRF5 as seed ortholog is 100%.

Group of orthologs #988. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3J8Q8              	100.00%		A3LXM0              	100.00%
Bootstrap support for G3J8Q8 as seed ortholog is 100%.
Bootstrap support for A3LXM0 as seed ortholog is 100%.

Group of orthologs #989. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 S.stipitis:362

G3JCP6              	100.00%		A3M087              	100.00%
Bootstrap support for G3JCP6 as seed ortholog is 100%.
Bootstrap support for A3M087 as seed ortholog is 100%.

Group of orthologs #990. Best score 361 bits
Score difference with first non-orthologous sequence - C.militaris:361 S.stipitis:361

G3JBE3              	100.00%		A3LXL8              	100.00%
Bootstrap support for G3JBE3 as seed ortholog is 100%.
Bootstrap support for A3LXL8 as seed ortholog is 100%.

Group of orthologs #991. Best score 361 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:171

G3JLJ4              	100.00%		A3LMX7              	100.00%
Bootstrap support for G3JLJ4 as seed ortholog is 99%.
Bootstrap support for A3LMX7 as seed ortholog is 99%.

Group of orthologs #992. Best score 361 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:361

G3JHZ3              	100.00%		A3LTQ0              	100.00%
Bootstrap support for G3JHZ3 as seed ortholog is 100%.
Bootstrap support for A3LTQ0 as seed ortholog is 100%.

Group of orthologs #993. Best score 360 bits
Score difference with first non-orthologous sequence - C.militaris:360 S.stipitis:360

G3JE29              	100.00%		A3GF11              	100.00%
Bootstrap support for G3JE29 as seed ortholog is 100%.
Bootstrap support for A3GF11 as seed ortholog is 100%.

Group of orthologs #994. Best score 360 bits
Score difference with first non-orthologous sequence - C.militaris:360 S.stipitis:360

G3J5T9              	100.00%		A3LZT5              	100.00%
Bootstrap support for G3J5T9 as seed ortholog is 100%.
Bootstrap support for A3LZT5 as seed ortholog is 100%.

Group of orthologs #995. Best score 360 bits
Score difference with first non-orthologous sequence - C.militaris:360 S.stipitis:360

G3JU88              	100.00%		A3LRG2              	100.00%
Bootstrap support for G3JU88 as seed ortholog is 100%.
Bootstrap support for A3LRG2 as seed ortholog is 100%.

Group of orthologs #996. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:229

G3J6Z4              	100.00%		A3GG51              	100.00%
Bootstrap support for G3J6Z4 as seed ortholog is 99%.
Bootstrap support for A3GG51 as seed ortholog is 99%.

Group of orthologs #997. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 S.stipitis:359

G3J5M0              	100.00%		A3LPM1              	100.00%
Bootstrap support for G3J5M0 as seed ortholog is 100%.
Bootstrap support for A3LPM1 as seed ortholog is 100%.

Group of orthologs #998. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 S.stipitis:359

G3J3L7              	100.00%		A3LSA9              	100.00%
Bootstrap support for G3J3L7 as seed ortholog is 100%.
Bootstrap support for A3LSA9 as seed ortholog is 100%.

Group of orthologs #999. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 S.stipitis:359

G3J5S8              	100.00%		A3LZA5              	100.00%
Bootstrap support for G3J5S8 as seed ortholog is 100%.
Bootstrap support for A3LZA5 as seed ortholog is 100%.

Group of orthologs #1000. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 S.stipitis:359

G3JPV0              	100.00%		A3GHY3              	100.00%
Bootstrap support for G3JPV0 as seed ortholog is 100%.
Bootstrap support for A3GHY3 as seed ortholog is 100%.

Group of orthologs #1001. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 S.stipitis:359

G3JPW4              	100.00%		A3GHY6              	100.00%
Bootstrap support for G3JPW4 as seed ortholog is 100%.
Bootstrap support for A3GHY6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 358 bits
Score difference with first non-orthologous sequence - C.militaris:358 S.stipitis:358

G3JB53              	100.00%		A3LT93              	100.00%
Bootstrap support for G3JB53 as seed ortholog is 100%.
Bootstrap support for A3LT93 as seed ortholog is 100%.

Group of orthologs #1003. Best score 358 bits
Score difference with first non-orthologous sequence - C.militaris:358 S.stipitis:358

G3JIE5              	100.00%		A3LMZ4              	100.00%
Bootstrap support for G3JIE5 as seed ortholog is 100%.
Bootstrap support for A3LMZ4 as seed ortholog is 100%.

Group of orthologs #1004. Best score 358 bits
Score difference with first non-orthologous sequence - C.militaris:358 S.stipitis:358

G3JJC3              	100.00%		A3LWR2              	100.00%
Bootstrap support for G3JJC3 as seed ortholog is 100%.
Bootstrap support for A3LWR2 as seed ortholog is 100%.

Group of orthologs #1005. Best score 358 bits
Score difference with first non-orthologous sequence - C.militaris:358 S.stipitis:358

G3JU26              	100.00%		A3LQF2              	100.00%
Bootstrap support for G3JU26 as seed ortholog is 100%.
Bootstrap support for A3LQF2 as seed ortholog is 100%.

Group of orthologs #1006. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:357 S.stipitis:357

G3JFT2              	100.00%		A3GHK0              	100.00%
Bootstrap support for G3JFT2 as seed ortholog is 100%.
Bootstrap support for A3GHK0 as seed ortholog is 100%.

Group of orthologs #1007. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:226 S.stipitis:209

G3J8I4              	100.00%		A3LVB6              	100.00%
Bootstrap support for G3J8I4 as seed ortholog is 100%.
Bootstrap support for A3LVB6 as seed ortholog is 99%.

Group of orthologs #1008. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:357

G3JCQ9              	100.00%		A3LRL8              	100.00%
Bootstrap support for G3JCQ9 as seed ortholog is 99%.
Bootstrap support for A3LRL8 as seed ortholog is 100%.

Group of orthologs #1009. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:357 S.stipitis:357

G3JCF6              	100.00%		A3LTJ4              	100.00%
Bootstrap support for G3JCF6 as seed ortholog is 100%.
Bootstrap support for A3LTJ4 as seed ortholog is 100%.

Group of orthologs #1010. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:357 S.stipitis:357

G3J9F6              	100.00%		A3LYW2              	100.00%
Bootstrap support for G3J9F6 as seed ortholog is 100%.
Bootstrap support for A3LYW2 as seed ortholog is 100%.

Group of orthologs #1011. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:164

G3JHV5              	100.00%		A3LQN9              	100.00%
Bootstrap support for G3JHV5 as seed ortholog is 99%.
Bootstrap support for A3LQN9 as seed ortholog is 99%.

Group of orthologs #1012. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:256

G3JMK9              	100.00%		A3LU99              	100.00%
Bootstrap support for G3JMK9 as seed ortholog is 98%.
Bootstrap support for A3LU99 as seed ortholog is 100%.

Group of orthologs #1013. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:136

G3JKF6              	100.00%		A3M086              	100.00%
Bootstrap support for G3JKF6 as seed ortholog is 84%.
Bootstrap support for A3M086 as seed ortholog is 99%.

Group of orthologs #1014. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:356

G3JF45              	100.00%		A3GHF0              	100.00%
                    	       		A3GFN9              	73.83%
Bootstrap support for G3JF45 as seed ortholog is 100%.
Bootstrap support for A3GHF0 as seed ortholog is 100%.

Group of orthologs #1015. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:356

G3J7E1              	100.00%		A3LXQ7              	100.00%
                    	       		A3LSZ6              	77.09%
Bootstrap support for G3J7E1 as seed ortholog is 100%.
Bootstrap support for A3LXQ7 as seed ortholog is 100%.

Group of orthologs #1016. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:89

G3J412              	100.00%		A3GH82              	100.00%
Bootstrap support for G3J412 as seed ortholog is 100%.
Bootstrap support for A3GH82 as seed ortholog is 88%.

Group of orthologs #1017. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:356

G3JBW0              	100.00%		A3LWK3              	100.00%
Bootstrap support for G3JBW0 as seed ortholog is 100%.
Bootstrap support for A3LWK3 as seed ortholog is 100%.

Group of orthologs #1018. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:285

G3JM92              	100.00%		A3LQM3              	100.00%
Bootstrap support for G3JM92 as seed ortholog is 100%.
Bootstrap support for A3LQM3 as seed ortholog is 100%.

Group of orthologs #1019. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:356

G3JUX0              	100.00%		A3LQP8              	100.00%
Bootstrap support for G3JUX0 as seed ortholog is 100%.
Bootstrap support for A3LQP8 as seed ortholog is 100%.

Group of orthologs #1020. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 S.stipitis:356

G3JT31              	100.00%		A3LVS5              	100.00%
Bootstrap support for G3JT31 as seed ortholog is 100%.
Bootstrap support for A3LVS5 as seed ortholog is 100%.

Group of orthologs #1021. Best score 355 bits
Score difference with first non-orthologous sequence - C.militaris:355 S.stipitis:355

G3J431              	100.00%		A3LMW3              	100.00%
Bootstrap support for G3J431 as seed ortholog is 100%.
Bootstrap support for A3LMW3 as seed ortholog is 100%.

Group of orthologs #1022. Best score 354 bits
Score difference with first non-orthologous sequence - C.militaris:354 S.stipitis:354

G3JJX8              	100.00%		A3LRL7              	100.00%
Bootstrap support for G3JJX8 as seed ortholog is 100%.
Bootstrap support for A3LRL7 as seed ortholog is 100%.

Group of orthologs #1023. Best score 354 bits
Score difference with first non-orthologous sequence - C.militaris:10 S.stipitis:354

G3JKE4              	100.00%		A3LXG8              	100.00%
Bootstrap support for G3JKE4 as seed ortholog is 78%.
Bootstrap support for A3LXG8 as seed ortholog is 100%.

Group of orthologs #1024. Best score 354 bits
Score difference with first non-orthologous sequence - C.militaris:354 S.stipitis:354

G3JNP9              	100.00%		A3LX15              	100.00%
Bootstrap support for G3JNP9 as seed ortholog is 100%.
Bootstrap support for A3LX15 as seed ortholog is 100%.

Group of orthologs #1025. Best score 353 bits
Score difference with first non-orthologous sequence - C.militaris:353 S.stipitis:353

G3J560              	100.00%		A3LVG8              	100.00%
Bootstrap support for G3J560 as seed ortholog is 100%.
Bootstrap support for A3LVG8 as seed ortholog is 100%.

Group of orthologs #1026. Best score 353 bits
Score difference with first non-orthologous sequence - C.militaris:353 S.stipitis:353

G3JGA2              	100.00%		A3GFP3              	100.00%
Bootstrap support for G3JGA2 as seed ortholog is 100%.
Bootstrap support for A3GFP3 as seed ortholog is 100%.

Group of orthologs #1027. Best score 353 bits
Score difference with first non-orthologous sequence - C.militaris:353 S.stipitis:353

G3JEF7              	100.00%		A3LP99              	100.00%
Bootstrap support for G3JEF7 as seed ortholog is 100%.
Bootstrap support for A3LP99 as seed ortholog is 100%.

Group of orthologs #1028. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:352 S.stipitis:352

G3JFZ5              	100.00%		A3GFI8              	100.00%
Bootstrap support for G3JFZ5 as seed ortholog is 100%.
Bootstrap support for A3GFI8 as seed ortholog is 100%.

Group of orthologs #1029. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:352 S.stipitis:352

G3J742              	100.00%		A3LXJ6              	100.00%
Bootstrap support for G3J742 as seed ortholog is 100%.
Bootstrap support for A3LXJ6 as seed ortholog is 100%.

Group of orthologs #1030. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:352 S.stipitis:352

G3JEW1              	100.00%		A3M095              	100.00%
Bootstrap support for G3JEW1 as seed ortholog is 100%.
Bootstrap support for A3M095 as seed ortholog is 100%.

Group of orthologs #1031. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:352 S.stipitis:229

G3JSU4              	100.00%		A3LVW0              	100.00%
Bootstrap support for G3JSU4 as seed ortholog is 100%.
Bootstrap support for A3LVW0 as seed ortholog is 100%.

Group of orthologs #1032. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:234 S.stipitis:351

G3J916              	100.00%		A3LZ99              	100.00%
Bootstrap support for G3J916 as seed ortholog is 100%.
Bootstrap support for A3LZ99 as seed ortholog is 100%.

Group of orthologs #1033. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:351 S.stipitis:351

G3JL95              	100.00%		A3LQ06              	100.00%
Bootstrap support for G3JL95 as seed ortholog is 100%.
Bootstrap support for A3LQ06 as seed ortholog is 100%.

Group of orthologs #1034. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:45 S.stipitis:241

G3JTL5              	100.00%		A3GFE9              	100.00%
Bootstrap support for G3JTL5 as seed ortholog is 84%.
Bootstrap support for A3GFE9 as seed ortholog is 100%.

Group of orthologs #1035. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:351 S.stipitis:351

G3JLF8              	100.00%		A3LSL2              	100.00%
Bootstrap support for G3JLF8 as seed ortholog is 100%.
Bootstrap support for A3LSL2 as seed ortholog is 100%.

Group of orthologs #1036. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:351 S.stipitis:351

G3JL75              	100.00%		A3LWF8              	100.00%
Bootstrap support for G3JL75 as seed ortholog is 100%.
Bootstrap support for A3LWF8 as seed ortholog is 100%.

Group of orthologs #1037. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:351 S.stipitis:351

G3JV15              	100.00%		A3LQW3              	100.00%
Bootstrap support for G3JV15 as seed ortholog is 100%.
Bootstrap support for A3LQW3 as seed ortholog is 100%.

Group of orthologs #1038. Best score 350 bits
Score difference with first non-orthologous sequence - C.militaris:350 S.stipitis:350

G3JQ11              	100.00%		A3LZ37              	100.00%
G3JI49              	5.78%		
Bootstrap support for G3JQ11 as seed ortholog is 100%.
Bootstrap support for A3LZ37 as seed ortholog is 100%.

Group of orthologs #1039. Best score 350 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:350

G3J9A2              	100.00%		A3LSS1              	100.00%
Bootstrap support for G3J9A2 as seed ortholog is 100%.
Bootstrap support for A3LSS1 as seed ortholog is 100%.

Group of orthologs #1040. Best score 350 bits
Score difference with first non-orthologous sequence - C.militaris:350 S.stipitis:350

G3JNA9              	100.00%		A3GHZ3              	100.00%
Bootstrap support for G3JNA9 as seed ortholog is 100%.
Bootstrap support for A3GHZ3 as seed ortholog is 100%.

Group of orthologs #1041. Best score 350 bits
Score difference with first non-orthologous sequence - C.militaris:350 S.stipitis:350

G3JSA0              	100.00%		A3GGC4              	100.00%
Bootstrap support for G3JSA0 as seed ortholog is 100%.
Bootstrap support for A3GGC4 as seed ortholog is 100%.

Group of orthologs #1042. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:349 S.stipitis:349

G3JGG2              	100.00%		A3GI09              	100.00%
                    	       		A3LNA0              	100.00%
Bootstrap support for G3JGG2 as seed ortholog is 100%.
Bootstrap support for A3GI09 as seed ortholog is 100%.
Bootstrap support for A3LNA0 as seed ortholog is 100%.

Group of orthologs #1043. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:349

G3J5T0              	100.00%		A3LT50              	100.00%
Bootstrap support for G3J5T0 as seed ortholog is 100%.
Bootstrap support for A3LT50 as seed ortholog is 100%.

Group of orthologs #1044. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:297 S.stipitis:154

G3J3B1              	100.00%		A3M0I2              	100.00%
Bootstrap support for G3J3B1 as seed ortholog is 100%.
Bootstrap support for A3M0I2 as seed ortholog is 99%.

Group of orthologs #1045. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:349

G3JL94              	100.00%		A3GGS1              	100.00%
Bootstrap support for G3JL94 as seed ortholog is 99%.
Bootstrap support for A3GGS1 as seed ortholog is 100%.

Group of orthologs #1046. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:349 S.stipitis:349

G3JD71              	100.00%		A3LX95              	100.00%
Bootstrap support for G3JD71 as seed ortholog is 100%.
Bootstrap support for A3LX95 as seed ortholog is 100%.

Group of orthologs #1047. Best score 348 bits
Score difference with first non-orthologous sequence - C.militaris:348 S.stipitis:294

G3JAP2              	100.00%		A3LXX0              	100.00%
Bootstrap support for G3JAP2 as seed ortholog is 100%.
Bootstrap support for A3LXX0 as seed ortholog is 100%.

Group of orthologs #1048. Best score 348 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:250

G3JA28              	100.00%		A3LYV2              	100.00%
Bootstrap support for G3JA28 as seed ortholog is 99%.
Bootstrap support for A3LYV2 as seed ortholog is 100%.

Group of orthologs #1049. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:347 S.stipitis:347

G3J7N6              	100.00%		A3LWX1              	100.00%
G3J473              	6.40%		
Bootstrap support for G3J7N6 as seed ortholog is 100%.
Bootstrap support for A3LWX1 as seed ortholog is 100%.

Group of orthologs #1050. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:247 S.stipitis:347

G3JB34              	100.00%		A3LW61              	100.00%
                    	       		A3LYX9              	49.95%
Bootstrap support for G3JB34 as seed ortholog is 100%.
Bootstrap support for A3LW61 as seed ortholog is 100%.

Group of orthologs #1051. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:198

G3J9E3              	100.00%		A3LUH2              	100.00%
Bootstrap support for G3J9E3 as seed ortholog is 99%.
Bootstrap support for A3LUH2 as seed ortholog is 100%.

Group of orthologs #1052. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:347 S.stipitis:347

G3JK80              	100.00%		A3GFH5              	100.00%
Bootstrap support for G3JK80 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:261 S.stipitis:245

G3JBF8              	100.00%		A3LVQ5              	100.00%
Bootstrap support for G3JBF8 as seed ortholog is 100%.
Bootstrap support for A3LVQ5 as seed ortholog is 100%.

Group of orthologs #1054. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:347 S.stipitis:347

G3JIV8              	100.00%		A3LV34              	100.00%
Bootstrap support for G3JIV8 as seed ortholog is 100%.
Bootstrap support for A3LV34 as seed ortholog is 100%.

Group of orthologs #1055. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:347 S.stipitis:347

G3JNC8              	100.00%		A3LY33              	100.00%
Bootstrap support for G3JNC8 as seed ortholog is 100%.
Bootstrap support for A3LY33 as seed ortholog is 100%.

Group of orthologs #1056. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:347 S.stipitis:347

G3JSQ9              	100.00%		A3LUK1              	100.00%
Bootstrap support for G3JSQ9 as seed ortholog is 100%.
Bootstrap support for A3LUK1 as seed ortholog is 100%.

Group of orthologs #1057. Best score 346 bits
Score difference with first non-orthologous sequence - C.militaris:346 S.stipitis:66

G3JAM6              	100.00%		A3LMU3              	100.00%
Bootstrap support for G3JAM6 as seed ortholog is 100%.
Bootstrap support for A3LMU3 as seed ortholog is 93%.

Group of orthologs #1058. Best score 346 bits
Score difference with first non-orthologous sequence - C.militaris:287 S.stipitis:346

G3J3J9              	100.00%		A3LYW1              	100.00%
Bootstrap support for G3J3J9 as seed ortholog is 100%.
Bootstrap support for A3LYW1 as seed ortholog is 100%.

Group of orthologs #1059. Best score 346 bits
Score difference with first non-orthologous sequence - C.militaris:346 S.stipitis:346

G3JE10              	100.00%		A3LVJ1              	100.00%
Bootstrap support for G3JE10 as seed ortholog is 100%.
Bootstrap support for A3LVJ1 as seed ortholog is 100%.

Group of orthologs #1060. Best score 345 bits
Score difference with first non-orthologous sequence - C.militaris:345 S.stipitis:116

G3J9Y5              	100.00%		A3GFI1              	100.00%
Bootstrap support for G3J9Y5 as seed ortholog is 100%.
Bootstrap support for A3GFI1 as seed ortholog is 98%.

Group of orthologs #1061. Best score 345 bits
Score difference with first non-orthologous sequence - C.militaris:345 S.stipitis:345

G3J5I8              	100.00%		A3LQH4              	100.00%
Bootstrap support for G3J5I8 as seed ortholog is 100%.
Bootstrap support for A3LQH4 as seed ortholog is 100%.

Group of orthologs #1062. Best score 345 bits
Score difference with first non-orthologous sequence - C.militaris:345 S.stipitis:41

G3JF81              	100.00%		A3LTB1              	100.00%
Bootstrap support for G3JF81 as seed ortholog is 100%.
Bootstrap support for A3LTB1 as seed ortholog is 81%.

Group of orthologs #1063. Best score 345 bits
Score difference with first non-orthologous sequence - C.militaris:345 S.stipitis:345

G3JRC8              	100.00%		A3LRZ0              	100.00%
Bootstrap support for G3JRC8 as seed ortholog is 100%.
Bootstrap support for A3LRZ0 as seed ortholog is 100%.

Group of orthologs #1064. Best score 345 bits
Score difference with first non-orthologous sequence - C.militaris:345 S.stipitis:345

G3JTT3              	100.00%		A3LZ82              	100.00%
Bootstrap support for G3JTT3 as seed ortholog is 100%.
Bootstrap support for A3LZ82 as seed ortholog is 100%.

Group of orthologs #1065. Best score 344 bits
Score difference with first non-orthologous sequence - C.militaris:344 S.stipitis:344

G3JCZ8              	100.00%		A3LZ93              	100.00%
Bootstrap support for G3JCZ8 as seed ortholog is 100%.
Bootstrap support for A3LZ93 as seed ortholog is 100%.

Group of orthologs #1066. Best score 343 bits
Score difference with first non-orthologous sequence - C.militaris:343 S.stipitis:343

G3JBB0              	100.00%		A3LYI9              	100.00%
                    	       		A3LU81              	27.27%
Bootstrap support for G3JBB0 as seed ortholog is 100%.
Bootstrap support for A3LYI9 as seed ortholog is 100%.

Group of orthologs #1067. Best score 343 bits
Score difference with first non-orthologous sequence - C.militaris:343 S.stipitis:343

G3JPX6              	100.00%		A3LV51              	100.00%
Bootstrap support for G3JPX6 as seed ortholog is 100%.
Bootstrap support for A3LV51 as seed ortholog is 100%.

Group of orthologs #1068. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 S.stipitis:342

G3JMN1              	100.00%		A3GFE2              	100.00%
Bootstrap support for G3JMN1 as seed ortholog is 100%.
Bootstrap support for A3GFE2 as seed ortholog is 100%.

Group of orthologs #1069. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 S.stipitis:342

G3JQD6              	100.00%		A3GGM5              	100.00%
Bootstrap support for G3JQD6 as seed ortholog is 100%.
Bootstrap support for A3GGM5 as seed ortholog is 100%.

Group of orthologs #1070. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 S.stipitis:342

G3JSS2              	100.00%		A3GHR1              	100.00%
Bootstrap support for G3JSS2 as seed ortholog is 100%.
Bootstrap support for A3GHR1 as seed ortholog is 100%.

Group of orthologs #1071. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 S.stipitis:342

G3JKQ1              	100.00%		A3LX48              	100.00%
Bootstrap support for G3JKQ1 as seed ortholog is 100%.
Bootstrap support for A3LX48 as seed ortholog is 100%.

Group of orthologs #1072. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:106

G3JS82              	100.00%		A3GHP4              	100.00%
                    	       		A3GHP5              	68.64%
                    	       		A3LSI1              	37.72%
                    	       		A3GHA6              	32.02%
Bootstrap support for G3JS82 as seed ortholog is 100%.
Bootstrap support for A3GHP4 as seed ortholog is 99%.

Group of orthologs #1073. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:20

G3J669              	100.00%		A3LZQ3              	100.00%
Bootstrap support for G3J669 as seed ortholog is 99%.
Bootstrap support for A3LZQ3 as seed ortholog is 69%.
Alternative seed ortholog is A3LMS9 (20 bits away from this cluster)

Group of orthologs #1074. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 S.stipitis:341

G3JAE9              	100.00%		A3LXN5              	100.00%
Bootstrap support for G3JAE9 as seed ortholog is 100%.
Bootstrap support for A3LXN5 as seed ortholog is 100%.

Group of orthologs #1075. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 S.stipitis:283

G3JDM7              	100.00%		A3M008              	100.00%
Bootstrap support for G3JDM7 as seed ortholog is 100%.
Bootstrap support for A3M008 as seed ortholog is 100%.

Group of orthologs #1076. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:340 S.stipitis:340

G3J2S6              	100.00%		A3LY48              	100.00%
Bootstrap support for G3J2S6 as seed ortholog is 100%.
Bootstrap support for A3LY48 as seed ortholog is 100%.

Group of orthologs #1077. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:340 S.stipitis:340

G3J9S2              	100.00%		A3LRL5              	100.00%
Bootstrap support for G3J9S2 as seed ortholog is 100%.
Bootstrap support for A3LRL5 as seed ortholog is 100%.

Group of orthologs #1078. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:340 S.stipitis:340

G3J5B6              	100.00%		A3M057              	100.00%
Bootstrap support for G3J5B6 as seed ortholog is 100%.
Bootstrap support for A3M057 as seed ortholog is 100%.

Group of orthologs #1079. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:339

G3JBH3              	100.00%		A3LU51              	100.00%
G3JAE7              	34.58%		
Bootstrap support for G3JBH3 as seed ortholog is 100%.
Bootstrap support for A3LU51 as seed ortholog is 100%.

Group of orthologs #1080. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:339

G3J7M0              	100.00%		A3LVJ4              	100.00%
Bootstrap support for G3J7M0 as seed ortholog is 99%.
Bootstrap support for A3LVJ4 as seed ortholog is 100%.

Group of orthologs #1081. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:339

G3JJV7              	100.00%		A3GI64              	100.00%
Bootstrap support for G3JJV7 as seed ortholog is 100%.
Bootstrap support for A3GI64 as seed ortholog is 100%.

Group of orthologs #1082. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:339

G3J900              	100.00%		A3LYP8              	100.00%
Bootstrap support for G3J900 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #1083. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:55

G3JKM0              	100.00%		A3LXG3              	100.00%
Bootstrap support for G3JKM0 as seed ortholog is 100%.
Bootstrap support for A3LXG3 as seed ortholog is 93%.

Group of orthologs #1084. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:339

G3JT46              	100.00%		A3LRV3              	100.00%
Bootstrap support for G3JT46 as seed ortholog is 100%.
Bootstrap support for A3LRV3 as seed ortholog is 100%.

Group of orthologs #1085. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:339

G3JSA1              	100.00%		A3LTD1              	100.00%
Bootstrap support for G3JSA1 as seed ortholog is 100%.
Bootstrap support for A3LTD1 as seed ortholog is 100%.

Group of orthologs #1086. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 S.stipitis:339

G3JPQ3              	100.00%		A3LYX3              	100.00%
Bootstrap support for G3JPQ3 as seed ortholog is 100%.
Bootstrap support for A3LYX3 as seed ortholog is 100%.

Group of orthologs #1087. Best score 338 bits
Score difference with first non-orthologous sequence - C.militaris:338 S.stipitis:338

G3J4I9              	100.00%		A3LXW4              	100.00%
Bootstrap support for G3J4I9 as seed ortholog is 100%.
Bootstrap support for A3LXW4 as seed ortholog is 100%.

Group of orthologs #1088. Best score 338 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:97

G3JIZ3              	100.00%		A3LQI1              	100.00%
Bootstrap support for G3JIZ3 as seed ortholog is 99%.
Bootstrap support for A3LQI1 as seed ortholog is 99%.

Group of orthologs #1089. Best score 338 bits
Score difference with first non-orthologous sequence - C.militaris:338 S.stipitis:338

G3JM40              	100.00%		A3LQE6              	100.00%
Bootstrap support for G3JM40 as seed ortholog is 100%.
Bootstrap support for A3LQE6 as seed ortholog is 100%.

Group of orthologs #1090. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:337

G3J3Q3              	100.00%		A3GF08              	100.00%
Bootstrap support for G3J3Q3 as seed ortholog is 100%.
Bootstrap support for A3GF08 as seed ortholog is 100%.

Group of orthologs #1091. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:337

G3J3S0              	100.00%		A3LRA0              	100.00%
Bootstrap support for G3J3S0 as seed ortholog is 100%.
Bootstrap support for A3LRA0 as seed ortholog is 100%.

Group of orthologs #1092. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:337

G3JB65              	100.00%		A3LQG1              	100.00%
Bootstrap support for G3JB65 as seed ortholog is 100%.
Bootstrap support for A3LQG1 as seed ortholog is 100%.

Group of orthologs #1093. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:337

G3JCM9              	100.00%		A3LQ90              	100.00%
Bootstrap support for G3JCM9 as seed ortholog is 100%.
Bootstrap support for A3LQ90 as seed ortholog is 100%.

Group of orthologs #1094. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:337

G3JI72              	100.00%		A3GGD3              	100.00%
Bootstrap support for G3JI72 as seed ortholog is 100%.
Bootstrap support for A3GGD3 as seed ortholog is 100%.

Group of orthologs #1095. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:196

G3JM52              	100.00%		A3LMZ6              	100.00%
Bootstrap support for G3JM52 as seed ortholog is 100%.
Bootstrap support for A3LMZ6 as seed ortholog is 100%.

Group of orthologs #1096. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 S.stipitis:174

G3JGB3              	100.00%		A3LZR3              	100.00%
Bootstrap support for G3JGB3 as seed ortholog is 100%.
Bootstrap support for A3LZR3 as seed ortholog is 99%.

Group of orthologs #1097. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:336 S.stipitis:336

G3JBJ9              	100.00%		A3GGI9              	100.00%
                    	       		A3GGM0              	14.54%
Bootstrap support for G3JBJ9 as seed ortholog is 100%.
Bootstrap support for A3GGI9 as seed ortholog is 100%.

Group of orthologs #1098. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:336

G3J886              	100.00%		A3LWE2              	100.00%
Bootstrap support for G3J886 as seed ortholog is 96%.
Bootstrap support for A3LWE2 as seed ortholog is 100%.

Group of orthologs #1099. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:336 S.stipitis:336

G3JLA8              	100.00%		A3LNP5              	100.00%
Bootstrap support for G3JLA8 as seed ortholog is 100%.
Bootstrap support for A3LNP5 as seed ortholog is 100%.

Group of orthologs #1100. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:336 S.stipitis:336

G3JTL8              	100.00%		A3GF16              	100.00%
Bootstrap support for G3JTL8 as seed ortholog is 100%.
Bootstrap support for A3GF16 as seed ortholog is 100%.

Group of orthologs #1101. Best score 335 bits
Score difference with first non-orthologous sequence - C.militaris:335 S.stipitis:335

G3JCD3              	100.00%		A3LTA0              	100.00%
Bootstrap support for G3JCD3 as seed ortholog is 100%.
Bootstrap support for A3LTA0 as seed ortholog is 100%.

Group of orthologs #1102. Best score 335 bits
Score difference with first non-orthologous sequence - C.militaris:335 S.stipitis:335

G3JPH8              	100.00%		A3LNZ6              	100.00%
Bootstrap support for G3JPH8 as seed ortholog is 100%.
Bootstrap support for A3LNZ6 as seed ortholog is 100%.

Group of orthologs #1103. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 S.stipitis:334

G3J3Q4              	100.00%		A3GF09              	100.00%
Bootstrap support for G3J3Q4 as seed ortholog is 100%.
Bootstrap support for A3GF09 as seed ortholog is 100%.

Group of orthologs #1104. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 S.stipitis:334

G3J719              	100.00%		A3LS43              	100.00%
Bootstrap support for G3J719 as seed ortholog is 100%.
Bootstrap support for A3LS43 as seed ortholog is 100%.

Group of orthologs #1105. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 S.stipitis:334

G3JFJ1              	100.00%		A3GFF1              	100.00%
Bootstrap support for G3JFJ1 as seed ortholog is 100%.
Bootstrap support for A3GFF1 as seed ortholog is 100%.

Group of orthologs #1106. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 S.stipitis:334

G3JD82              	100.00%		A3LQ13              	100.00%
Bootstrap support for G3JD82 as seed ortholog is 100%.
Bootstrap support for A3LQ13 as seed ortholog is 100%.

Group of orthologs #1107. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 S.stipitis:334

G3JE83              	100.00%		A3LQ91              	100.00%
Bootstrap support for G3JE83 as seed ortholog is 100%.
Bootstrap support for A3LQ91 as seed ortholog is 100%.

Group of orthologs #1108. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 S.stipitis:334

G3JGR0              	100.00%		A3LT55              	100.00%
Bootstrap support for G3JGR0 as seed ortholog is 100%.
Bootstrap support for A3LT55 as seed ortholog is 100%.

Group of orthologs #1109. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:333 S.stipitis:333

G3J9F1              	100.00%		A3LN20              	100.00%
G3JSL9              	29.74%		
Bootstrap support for G3J9F1 as seed ortholog is 100%.
Bootstrap support for A3LN20 as seed ortholog is 100%.

Group of orthologs #1110. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:333 S.stipitis:333

G3J9P1              	100.00%		A3GG86              	100.00%
Bootstrap support for G3J9P1 as seed ortholog is 100%.
Bootstrap support for A3GG86 as seed ortholog is 100%.

Group of orthologs #1111. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:333 S.stipitis:333

G3JAN2              	100.00%		A3LS45              	100.00%
Bootstrap support for G3JAN2 as seed ortholog is 100%.
Bootstrap support for A3LS45 as seed ortholog is 100%.

Group of orthologs #1112. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:333 S.stipitis:333

G3JH70              	100.00%		A3GH28              	100.00%
Bootstrap support for G3JH70 as seed ortholog is 100%.
Bootstrap support for A3GH28 as seed ortholog is 100%.

Group of orthologs #1113. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:333 S.stipitis:333

G3JPP3              	100.00%		A3LVB0              	100.00%
Bootstrap support for G3JPP3 as seed ortholog is 100%.
Bootstrap support for A3LVB0 as seed ortholog is 100%.

Group of orthologs #1114. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:333

G3JUK4              	100.00%		A3LWP2              	100.00%
Bootstrap support for G3JUK4 as seed ortholog is 98%.
Bootstrap support for A3LWP2 as seed ortholog is 100%.

Group of orthologs #1115. Best score 332 bits
Score difference with first non-orthologous sequence - C.militaris:332 S.stipitis:332

G3JKF9              	100.00%		A3LZS2              	100.00%
Bootstrap support for G3JKF9 as seed ortholog is 100%.
Bootstrap support for A3LZS2 as seed ortholog is 100%.

Group of orthologs #1116. Best score 332 bits
Score difference with first non-orthologous sequence - C.militaris:332 S.stipitis:332

G3JS70              	100.00%		A3LZR0              	100.00%
Bootstrap support for G3JS70 as seed ortholog is 100%.
Bootstrap support for A3LZR0 as seed ortholog is 100%.

Group of orthologs #1117. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:331

G3J8X5              	100.00%		A3LQV2              	100.00%
Bootstrap support for G3J8X5 as seed ortholog is 99%.
Bootstrap support for A3LQV2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:72

G3JM29              	100.00%		A3LNL7              	100.00%
Bootstrap support for G3JM29 as seed ortholog is 99%.
Bootstrap support for A3LNL7 as seed ortholog is 92%.

Group of orthologs #1119. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:331 S.stipitis:331

G3JKX1              	100.00%		A3LZ16              	100.00%
Bootstrap support for G3JKX1 as seed ortholog is 100%.
Bootstrap support for A3LZ16 as seed ortholog is 100%.

Group of orthologs #1120. Best score 330 bits
Score difference with first non-orthologous sequence - C.militaris:330 S.stipitis:330

G3JIS5              	100.00%		A3LSA8              	100.00%
G3J4M9              	6.02%		
Bootstrap support for G3JIS5 as seed ortholog is 100%.
Bootstrap support for A3LSA8 as seed ortholog is 100%.

Group of orthologs #1121. Best score 330 bits
Score difference with first non-orthologous sequence - C.militaris:330 S.stipitis:330

G3JCP9              	100.00%		A3LWN0              	100.00%
Bootstrap support for G3JCP9 as seed ortholog is 100%.
Bootstrap support for A3LWN0 as seed ortholog is 100%.

Group of orthologs #1122. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:150

G3JHM7              	100.00%		A3LYV6              	100.00%
                    	       		A3LZR8              	100.00%
Bootstrap support for G3JHM7 as seed ortholog is 99%.
Bootstrap support for A3LYV6 as seed ortholog is 100%.
Bootstrap support for A3LZR8 as seed ortholog is 100%.

Group of orthologs #1123. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 S.stipitis:329

G3J880              	100.00%		A3LNZ7              	100.00%
Bootstrap support for G3J880 as seed ortholog is 100%.
Bootstrap support for A3LNZ7 as seed ortholog is 100%.

Group of orthologs #1124. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 S.stipitis:329

G3J6H8              	100.00%		A3LSB1              	100.00%
Bootstrap support for G3J6H8 as seed ortholog is 100%.
Bootstrap support for A3LSB1 as seed ortholog is 100%.

Group of orthologs #1125. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 S.stipitis:329

G3J6P2              	100.00%		A3LTL8              	100.00%
Bootstrap support for G3J6P2 as seed ortholog is 100%.
Bootstrap support for A3LTL8 as seed ortholog is 100%.

Group of orthologs #1126. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:327 S.stipitis:327

G3J4Z8              	100.00%		A3LX90              	100.00%
Bootstrap support for G3J4Z8 as seed ortholog is 100%.
Bootstrap support for A3LX90 as seed ortholog is 100%.

Group of orthologs #1127. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:327 S.stipitis:327

G3JB40              	100.00%		A3LTA4              	100.00%
Bootstrap support for G3JB40 as seed ortholog is 100%.
Bootstrap support for A3LTA4 as seed ortholog is 100%.

Group of orthologs #1128. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:327 S.stipitis:327

G3JPA4              	100.00%		A3GFU6              	100.00%
Bootstrap support for G3JPA4 as seed ortholog is 100%.
Bootstrap support for A3GFU6 as seed ortholog is 100%.

Group of orthologs #1129. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:327 S.stipitis:106

G3JRR2              	100.00%		A3GID6              	100.00%
Bootstrap support for G3JRR2 as seed ortholog is 100%.
Bootstrap support for A3GID6 as seed ortholog is 99%.

Group of orthologs #1130. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 S.stipitis:326

G3J618              	100.00%		A3LW88              	100.00%
Bootstrap support for G3J618 as seed ortholog is 100%.
Bootstrap support for A3LW88 as seed ortholog is 100%.

Group of orthologs #1131. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 S.stipitis:326

G3JEH9              	100.00%		A3LP82              	100.00%
Bootstrap support for G3JEH9 as seed ortholog is 100%.
Bootstrap support for A3LP82 as seed ortholog is 100%.

Group of orthologs #1132. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 S.stipitis:326

G3JRM9              	100.00%		A3LP15              	100.00%
Bootstrap support for G3JRM9 as seed ortholog is 100%.
Bootstrap support for A3LP15 as seed ortholog is 100%.

Group of orthologs #1133. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:325

G3J625              	100.00%		A3GFY4              	100.00%
Bootstrap support for G3J625 as seed ortholog is 92%.
Bootstrap support for A3GFY4 as seed ortholog is 100%.

Group of orthologs #1134. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:325 S.stipitis:325

G3J8P6              	100.00%		A3GI79              	100.00%
Bootstrap support for G3J8P6 as seed ortholog is 100%.
Bootstrap support for A3GI79 as seed ortholog is 100%.

Group of orthologs #1135. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:325 S.stipitis:325

G3J9E7              	100.00%		A3LWP4              	100.00%
Bootstrap support for G3J9E7 as seed ortholog is 100%.
Bootstrap support for A3LWP4 as seed ortholog is 100%.

Group of orthologs #1136. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:325 S.stipitis:325

G3JGN2              	100.00%		A3LR93              	100.00%
Bootstrap support for G3JGN2 as seed ortholog is 100%.
Bootstrap support for A3LR93 as seed ortholog is 100%.

Group of orthologs #1137. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:177

G3JIU0              	100.00%		A3GFF6              	100.00%
                    	       		A3GHM8              	100.00%
                    	       		A3GFC9              	53.02%
                    	       		A3LUN6              	49.40%
                    	       		A3LYK3              	47.73%
                    	       		A3LQQ4              	41.99%
Bootstrap support for G3JIU0 as seed ortholog is 99%.
Bootstrap support for A3GFF6 as seed ortholog is 99%.
Bootstrap support for A3GHM8 as seed ortholog is 99%.

Group of orthologs #1138. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:324 S.stipitis:324

G3J5P2              	100.00%		A3GFA1              	100.00%
Bootstrap support for G3J5P2 as seed ortholog is 100%.
Bootstrap support for A3GFA1 as seed ortholog is 100%.

Group of orthologs #1139. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:324 S.stipitis:202

G3J5Z9              	100.00%		A3GFU4              	100.00%
Bootstrap support for G3J5Z9 as seed ortholog is 100%.
Bootstrap support for A3GFU4 as seed ortholog is 100%.

Group of orthologs #1140. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:324 S.stipitis:324

G3J7T7              	100.00%		A3GG05              	100.00%
Bootstrap support for G3J7T7 as seed ortholog is 100%.
Bootstrap support for A3GG05 as seed ortholog is 100%.

Group of orthologs #1141. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:324 S.stipitis:324

G3J6S9              	100.00%		A3LT49              	100.00%
Bootstrap support for G3J6S9 as seed ortholog is 100%.
Bootstrap support for A3LT49 as seed ortholog is 100%.

Group of orthologs #1142. Best score 323 bits
Score difference with first non-orthologous sequence - C.militaris:323 S.stipitis:323

G3J948              	100.00%		A3LR41              	100.00%
Bootstrap support for G3J948 as seed ortholog is 100%.
Bootstrap support for A3LR41 as seed ortholog is 100%.

Group of orthologs #1143. Best score 323 bits
Score difference with first non-orthologous sequence - C.militaris:323 S.stipitis:323

G3JKI2              	100.00%		A3GH05              	100.00%
Bootstrap support for G3JKI2 as seed ortholog is 100%.
Bootstrap support for A3GH05 as seed ortholog is 100%.

Group of orthologs #1144. Best score 323 bits
Score difference with first non-orthologous sequence - C.militaris:323 S.stipitis:323

G3JN57              	100.00%		A3GI99              	100.00%
Bootstrap support for G3JN57 as seed ortholog is 100%.
Bootstrap support for A3GI99 as seed ortholog is 100%.

Group of orthologs #1145. Best score 323 bits
Score difference with first non-orthologous sequence - C.militaris:323 S.stipitis:323

G3JN60              	100.00%		A3LQ27              	100.00%
Bootstrap support for G3JN60 as seed ortholog is 100%.
Bootstrap support for A3LQ27 as seed ortholog is 100%.

Group of orthologs #1146. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:238

G3JGU0              	100.00%		A3LPN0              	100.00%
                    	       		A3LSP7              	76.02%
Bootstrap support for G3JGU0 as seed ortholog is 100%.
Bootstrap support for A3LPN0 as seed ortholog is 100%.

Group of orthologs #1147. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:322 S.stipitis:322

G3J5M8              	100.00%		A3LS15              	100.00%
Bootstrap support for G3J5M8 as seed ortholog is 100%.
Bootstrap support for A3LS15 as seed ortholog is 100%.

Group of orthologs #1148. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:322 S.stipitis:322

G3JBT8              	100.00%		A3LQ82              	100.00%
Bootstrap support for G3JBT8 as seed ortholog is 100%.
Bootstrap support for A3LQ82 as seed ortholog is 100%.

Group of orthologs #1149. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:222 S.stipitis:257

G3JM46              	100.00%		A3LSY5              	100.00%
Bootstrap support for G3JM46 as seed ortholog is 100%.
Bootstrap support for A3LSY5 as seed ortholog is 100%.

Group of orthologs #1150. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 S.stipitis:321

G3J7H2              	100.00%		A3GHJ1              	100.00%
Bootstrap support for G3J7H2 as seed ortholog is 100%.
Bootstrap support for A3GHJ1 as seed ortholog is 100%.

Group of orthologs #1151. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:145 S.stipitis:89

G3J7Q9              	100.00%		A3LQE1              	100.00%
Bootstrap support for G3J7Q9 as seed ortholog is 100%.
Bootstrap support for A3LQE1 as seed ortholog is 100%.

Group of orthologs #1152. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 S.stipitis:79

G3JD08              	100.00%		A3LNP2              	100.00%
Bootstrap support for G3JD08 as seed ortholog is 100%.
Bootstrap support for A3LNP2 as seed ortholog is 91%.

Group of orthologs #1153. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 S.stipitis:321

G3JJ23              	100.00%		A3LNM6              	100.00%
Bootstrap support for G3JJ23 as seed ortholog is 100%.
Bootstrap support for A3LNM6 as seed ortholog is 100%.

Group of orthologs #1154. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 S.stipitis:321

G3JPQ7              	100.00%		A3LVS9              	100.00%
Bootstrap support for G3JPQ7 as seed ortholog is 100%.
Bootstrap support for A3LVS9 as seed ortholog is 100%.

Group of orthologs #1155. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:222 S.stipitis:321

G3JU32              	100.00%		A3LXZ3              	100.00%
Bootstrap support for G3JU32 as seed ortholog is 100%.
Bootstrap support for A3LXZ3 as seed ortholog is 100%.

Group of orthologs #1156. Best score 320 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:320

G3J6D5              	100.00%		A3LPN3              	100.00%
                    	       		A3LSP4              	81.25%
Bootstrap support for G3J6D5 as seed ortholog is 99%.
Bootstrap support for A3LPN3 as seed ortholog is 100%.

Group of orthologs #1157. Best score 320 bits
Score difference with first non-orthologous sequence - C.militaris:320 S.stipitis:320

G3J5R8              	100.00%		A3LNF7              	100.00%
Bootstrap support for G3J5R8 as seed ortholog is 100%.
Bootstrap support for A3LNF7 as seed ortholog is 100%.

Group of orthologs #1158. Best score 320 bits
Score difference with first non-orthologous sequence - C.militaris:320 S.stipitis:320

G3J5P4              	100.00%		A3LR94              	100.00%
Bootstrap support for G3J5P4 as seed ortholog is 100%.
Bootstrap support for A3LR94 as seed ortholog is 100%.

Group of orthologs #1159. Best score 320 bits
Score difference with first non-orthologous sequence - C.militaris:320 S.stipitis:320

G3JK27              	100.00%		A3LX64              	100.00%
Bootstrap support for G3JK27 as seed ortholog is 100%.
Bootstrap support for A3LX64 as seed ortholog is 100%.

Group of orthologs #1160. Best score 320 bits
Score difference with first non-orthologous sequence - C.militaris:320 S.stipitis:320

G3JTW3              	100.00%		A3LUB1              	100.00%
Bootstrap support for G3JTW3 as seed ortholog is 100%.
Bootstrap support for A3LUB1 as seed ortholog is 100%.

Group of orthologs #1161. Best score 319 bits
Score difference with first non-orthologous sequence - C.militaris:219 S.stipitis:191

G3JDZ8              	100.00%		A3LV75              	100.00%
Bootstrap support for G3JDZ8 as seed ortholog is 100%.
Bootstrap support for A3LV75 as seed ortholog is 100%.

Group of orthologs #1162. Best score 318 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:211

G3J592              	100.00%		A3LT45              	100.00%
Bootstrap support for G3J592 as seed ortholog is 100%.
Bootstrap support for A3LT45 as seed ortholog is 100%.

Group of orthologs #1163. Best score 318 bits
Score difference with first non-orthologous sequence - C.militaris:318 S.stipitis:318

G3J467              	100.00%		A3LXW1              	100.00%
Bootstrap support for G3J467 as seed ortholog is 100%.
Bootstrap support for A3LXW1 as seed ortholog is 100%.

Group of orthologs #1164. Best score 318 bits
Score difference with first non-orthologous sequence - C.militaris:318 S.stipitis:318

G3JG28              	100.00%		A3LZH1              	100.00%
Bootstrap support for G3JG28 as seed ortholog is 100%.
Bootstrap support for A3LZH1 as seed ortholog is 100%.

Group of orthologs #1165. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:31 S.stipitis:55

G3J4E4              	100.00%		A3GGC6              	100.00%
Bootstrap support for G3J4E4 as seed ortholog is 73%.
Alternative seed ortholog is G3JBY6 (31 bits away from this cluster)
Bootstrap support for A3GGC6 as seed ortholog is 87%.

Group of orthologs #1166. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:317 S.stipitis:317

G3JDT1              	100.00%		A3GGY9              	100.00%
Bootstrap support for G3JDT1 as seed ortholog is 100%.
Bootstrap support for A3GGY9 as seed ortholog is 100%.

Group of orthologs #1167. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:316

G3J5U7              	100.00%		A3LNA7              	100.00%
Bootstrap support for G3J5U7 as seed ortholog is 99%.
Bootstrap support for A3LNA7 as seed ortholog is 100%.

Group of orthologs #1168. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:224 S.stipitis:201

G3JG64              	100.00%		A3GGM3              	100.00%
Bootstrap support for G3JG64 as seed ortholog is 100%.
Bootstrap support for A3GGM3 as seed ortholog is 100%.

Group of orthologs #1169. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 S.stipitis:316

G3JD57              	100.00%		A3LR67              	100.00%
Bootstrap support for G3JD57 as seed ortholog is 100%.
Bootstrap support for A3LR67 as seed ortholog is 100%.

Group of orthologs #1170. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:239 S.stipitis:242

G3JN48              	100.00%		A3LNI4              	100.00%
Bootstrap support for G3JN48 as seed ortholog is 100%.
Bootstrap support for A3LNI4 as seed ortholog is 100%.

Group of orthologs #1171. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 S.stipitis:316

G3JMD2              	100.00%		A3LYE3              	100.00%
Bootstrap support for G3JMD2 as seed ortholog is 100%.
Bootstrap support for A3LYE3 as seed ortholog is 100%.

Group of orthologs #1172. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:47 S.stipitis:133

G3JLB2              	100.00%		A3GIC3              	100.00%
                    	       		A3LWY6              	21.37%
                    	       		A3GG68              	19.52%
Bootstrap support for G3JLB2 as seed ortholog is 86%.
Bootstrap support for A3GIC3 as seed ortholog is 99%.

Group of orthologs #1173. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:314 S.stipitis:314

G3J311              	100.00%		A3LVH9              	100.00%
Bootstrap support for G3J311 as seed ortholog is 100%.
Bootstrap support for A3LVH9 as seed ortholog is 100%.

Group of orthologs #1174. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:314 S.stipitis:314

G3J8Q1              	100.00%		A3LSR3              	100.00%
Bootstrap support for G3J8Q1 as seed ortholog is 100%.
Bootstrap support for A3LSR3 as seed ortholog is 100%.

Group of orthologs #1175. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:314

G3JK99              	100.00%		A3LNZ9              	100.00%
Bootstrap support for G3JK99 as seed ortholog is 99%.
Bootstrap support for A3LNZ9 as seed ortholog is 100%.

Group of orthologs #1176. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:314 S.stipitis:314

G3JPU8              	100.00%		A3LNA4              	100.00%
Bootstrap support for G3JPU8 as seed ortholog is 100%.
Bootstrap support for A3LNA4 as seed ortholog is 100%.

Group of orthologs #1177. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:225 S.stipitis:215

G3JEY8              	100.00%		A3LZN6              	100.00%
Bootstrap support for G3JEY8 as seed ortholog is 100%.
Bootstrap support for A3LZN6 as seed ortholog is 100%.

Group of orthologs #1178. Best score 313 bits
Score difference with first non-orthologous sequence - C.militaris:313 S.stipitis:313

G3JMP8              	100.00%		A3GFF9              	100.00%
Bootstrap support for G3JMP8 as seed ortholog is 100%.
Bootstrap support for A3GFF9 as seed ortholog is 100%.

Group of orthologs #1179. Best score 313 bits
Score difference with first non-orthologous sequence - C.militaris:313 S.stipitis:313

G3JNV2              	100.00%		A3LW21              	100.00%
Bootstrap support for G3JNV2 as seed ortholog is 100%.
Bootstrap support for A3LW21 as seed ortholog is 100%.

Group of orthologs #1180. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:81

G3JAR7              	100.00%		A3LMV5              	100.00%
G3JSU5              	30.38%		A3LN16              	34.01%
Bootstrap support for G3JAR7 as seed ortholog is 90%.
Bootstrap support for A3LMV5 as seed ortholog is 96%.

Group of orthologs #1181. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:312 S.stipitis:312

G3J7Q1              	100.00%		A3LSM5              	100.00%
                    	       		A3M034              	100.00%
Bootstrap support for G3J7Q1 as seed ortholog is 100%.
Bootstrap support for A3LSM5 as seed ortholog is 100%.
Bootstrap support for A3M034 as seed ortholog is 100%.

Group of orthologs #1182. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:312 S.stipitis:312

G3J4J4              	100.00%		A3LPE7              	100.00%
Bootstrap support for G3J4J4 as seed ortholog is 100%.
Bootstrap support for A3LPE7 as seed ortholog is 100%.

Group of orthologs #1183. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:247 S.stipitis:312

G3J950              	100.00%		A3LQ86              	100.00%
Bootstrap support for G3J950 as seed ortholog is 100%.
Bootstrap support for A3LQ86 as seed ortholog is 100%.

Group of orthologs #1184. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:312 S.stipitis:312

G3JF51              	100.00%		A3LN40              	100.00%
Bootstrap support for G3JF51 as seed ortholog is 100%.
Bootstrap support for A3LN40 as seed ortholog is 100%.

Group of orthologs #1185. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:312 S.stipitis:312

G3JP75              	100.00%		A3LQ81              	100.00%
Bootstrap support for G3JP75 as seed ortholog is 100%.
Bootstrap support for A3LQ81 as seed ortholog is 100%.

Group of orthologs #1186. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:189 S.stipitis:212

G3J9W6              	100.00%		A3LRF3              	100.00%
Bootstrap support for G3J9W6 as seed ortholog is 100%.
Bootstrap support for A3LRF3 as seed ortholog is 100%.

Group of orthologs #1187. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:311 S.stipitis:311

G3JDI2              	100.00%		A3LNF6              	100.00%
Bootstrap support for G3JDI2 as seed ortholog is 100%.
Bootstrap support for A3LNF6 as seed ortholog is 100%.

Group of orthologs #1188. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:311 S.stipitis:311

G3JGA6              	100.00%		A3LSX3              	100.00%
Bootstrap support for G3JGA6 as seed ortholog is 100%.
Bootstrap support for A3LSX3 as seed ortholog is 100%.

Group of orthologs #1189. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:311 S.stipitis:311

G3JN44              	100.00%		A3M0H9              	100.00%
Bootstrap support for G3JN44 as seed ortholog is 100%.
Bootstrap support for A3M0H9 as seed ortholog is 100%.

Group of orthologs #1190. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 S.stipitis:310

G3J3G0              	100.00%		A3LN44              	100.00%
Bootstrap support for G3J3G0 as seed ortholog is 100%.
Bootstrap support for A3LN44 as seed ortholog is 100%.

Group of orthologs #1191. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 S.stipitis:310

G3JC48              	100.00%		A3LQD7              	100.00%
Bootstrap support for G3JC48 as seed ortholog is 100%.
Bootstrap support for A3LQD7 as seed ortholog is 100%.

Group of orthologs #1192. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 S.stipitis:310

G3JIZ2              	100.00%		A3GGZ4              	100.00%
Bootstrap support for G3JIZ2 as seed ortholog is 100%.
Bootstrap support for A3GGZ4 as seed ortholog is 100%.

Group of orthologs #1193. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 S.stipitis:310

G3JD40              	100.00%		A3LVC9              	100.00%
Bootstrap support for G3JD40 as seed ortholog is 100%.
Bootstrap support for A3LVC9 as seed ortholog is 100%.

Group of orthologs #1194. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 S.stipitis:310

G3JR31              	100.00%		A3LZB3              	100.00%
Bootstrap support for G3JR31 as seed ortholog is 100%.
Bootstrap support for A3LZB3 as seed ortholog is 100%.

Group of orthologs #1195. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:309 S.stipitis:309

G3JMQ0              	100.00%		A3LP62              	100.00%
                    	       		A3LVG6              	14.88%
Bootstrap support for G3JMQ0 as seed ortholog is 100%.
Bootstrap support for A3LP62 as seed ortholog is 100%.

Group of orthologs #1196. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:309 S.stipitis:309

G3J354              	100.00%		A3GHN5              	100.00%
Bootstrap support for G3J354 as seed ortholog is 100%.
Bootstrap support for A3GHN5 as seed ortholog is 100%.

Group of orthologs #1197. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:309 S.stipitis:309

G3J334              	100.00%		A3LN57              	100.00%
Bootstrap support for G3J334 as seed ortholog is 100%.
Bootstrap support for A3LN57 as seed ortholog is 100%.

Group of orthologs #1198. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:216

G3J8G1              	100.00%		A3GH14              	100.00%
Bootstrap support for G3J8G1 as seed ortholog is 99%.
Bootstrap support for A3GH14 as seed ortholog is 99%.

Group of orthologs #1199. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:309 S.stipitis:309

G3JAT6              	100.00%		A3GHJ6              	100.00%
Bootstrap support for G3JAT6 as seed ortholog is 100%.
Bootstrap support for A3GHJ6 as seed ortholog is 100%.

Group of orthologs #1200. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:163

G3JD52              	100.00%		A3LNM7              	100.00%
Bootstrap support for G3JD52 as seed ortholog is 99%.
Bootstrap support for A3LNM7 as seed ortholog is 99%.

Group of orthologs #1201. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:233

G3JP63              	100.00%		A3LRH1              	100.00%
Bootstrap support for G3JP63 as seed ortholog is 99%.
Bootstrap support for A3LRH1 as seed ortholog is 100%.

Group of orthologs #1202. Best score 307 bits
Score difference with first non-orthologous sequence - C.militaris:307 S.stipitis:307

G3J3R3              	100.00%		A3LWK7              	100.00%
Bootstrap support for G3J3R3 as seed ortholog is 100%.
Bootstrap support for A3LWK7 as seed ortholog is 100%.

Group of orthologs #1203. Best score 307 bits
Score difference with first non-orthologous sequence - C.militaris:307 S.stipitis:307

G3JFY8              	100.00%		A3GGA2              	100.00%
Bootstrap support for G3JFY8 as seed ortholog is 100%.
Bootstrap support for A3GGA2 as seed ortholog is 100%.

Group of orthologs #1204. Best score 307 bits
Score difference with first non-orthologous sequence - C.militaris:307 S.stipitis:307

G3JQ40              	100.00%		A3GF74              	100.00%
Bootstrap support for G3JQ40 as seed ortholog is 100%.
Bootstrap support for A3GF74 as seed ortholog is 100%.

Group of orthologs #1205. Best score 307 bits
Score difference with first non-orthologous sequence - C.militaris:307 S.stipitis:209

G3JPR6              	100.00%		A3LPW5              	100.00%
Bootstrap support for G3JPR6 as seed ortholog is 100%.
Bootstrap support for A3LPW5 as seed ortholog is 100%.

Group of orthologs #1206. Best score 306 bits
Score difference with first non-orthologous sequence - C.militaris:306 S.stipitis:306

G3J4M0              	100.00%		A3LP40              	100.00%
Bootstrap support for G3J4M0 as seed ortholog is 100%.
Bootstrap support for A3LP40 as seed ortholog is 100%.

Group of orthologs #1207. Best score 305 bits
Score difference with first non-orthologous sequence - C.militaris:18 S.stipitis:62

G3JJR3              	100.00%		A3LNX0              	100.00%
G3JT03              	16.16%		A3LX97              	40.26%
                    	       		A3GEZ5              	38.29%
Bootstrap support for G3JJR3 as seed ortholog is 62%.
Alternative seed ortholog is G3JKI1 (18 bits away from this cluster)
Bootstrap support for A3LNX0 as seed ortholog is 91%.

Group of orthologs #1208. Best score 305 bits
Score difference with first non-orthologous sequence - C.militaris:305 S.stipitis:305

G3J6D4              	100.00%		A3LPN2              	100.00%
                    	       		A3LSP5              	82.40%
Bootstrap support for G3J6D4 as seed ortholog is 100%.
Bootstrap support for A3LPN2 as seed ortholog is 100%.

Group of orthologs #1209. Best score 305 bits
Score difference with first non-orthologous sequence - C.militaris:305 S.stipitis:305

G3J342              	100.00%		A3GGU7              	100.00%
Bootstrap support for G3J342 as seed ortholog is 100%.
Bootstrap support for A3GGU7 as seed ortholog is 100%.

Group of orthologs #1210. Best score 305 bits
Score difference with first non-orthologous sequence - C.militaris:305 S.stipitis:305

G3J8P4              	100.00%		A3GGP5              	100.00%
Bootstrap support for G3J8P4 as seed ortholog is 100%.
Bootstrap support for A3GGP5 as seed ortholog is 100%.

Group of orthologs #1211. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:304

G3J760              	100.00%		A3LRR5              	100.00%
Bootstrap support for G3J760 as seed ortholog is 99%.
Bootstrap support for A3LRR5 as seed ortholog is 100%.

Group of orthologs #1212. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 S.stipitis:304

G3JB24              	100.00%		A3LXN2              	100.00%
Bootstrap support for G3JB24 as seed ortholog is 100%.
Bootstrap support for A3LXN2 as seed ortholog is 100%.

Group of orthologs #1213. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 S.stipitis:304

G3JNP5              	100.00%		A3LRK1              	100.00%
Bootstrap support for G3JNP5 as seed ortholog is 100%.
Bootstrap support for A3LRK1 as seed ortholog is 100%.

Group of orthologs #1214. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 S.stipitis:304

G3JM12              	100.00%		A3LW04              	100.00%
Bootstrap support for G3JM12 as seed ortholog is 100%.
Bootstrap support for A3LW04 as seed ortholog is 100%.

Group of orthologs #1215. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 S.stipitis:55

G3JT33              	100.00%		A3M0P7              	100.00%
Bootstrap support for G3JT33 as seed ortholog is 100%.
Bootstrap support for A3M0P7 as seed ortholog is 96%.

Group of orthologs #1216. Best score 303 bits
Score difference with first non-orthologous sequence - C.militaris:303 S.stipitis:244

G3J301              	100.00%		A3LVE9              	100.00%
Bootstrap support for G3J301 as seed ortholog is 100%.
Bootstrap support for A3LVE9 as seed ortholog is 100%.

Group of orthologs #1217. Best score 303 bits
Score difference with first non-orthologous sequence - C.militaris:303 S.stipitis:303

G3JJI5              	100.00%		A3LSY9              	100.00%
Bootstrap support for G3JJI5 as seed ortholog is 100%.
Bootstrap support for A3LSY9 as seed ortholog is 100%.

Group of orthologs #1218. Best score 303 bits
Score difference with first non-orthologous sequence - C.militaris:303 S.stipitis:303

G3JTV9              	100.00%		A3LQ48              	100.00%
Bootstrap support for G3JTV9 as seed ortholog is 100%.
Bootstrap support for A3LQ48 as seed ortholog is 100%.

Group of orthologs #1219. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:211

G3J3G7              	100.00%		A3GGP7              	100.00%
Bootstrap support for G3J3G7 as seed ortholog is 100%.
Bootstrap support for A3GGP7 as seed ortholog is 100%.

Group of orthologs #1220. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3J3E9              	100.00%		A3LS77              	100.00%
Bootstrap support for G3J3E9 as seed ortholog is 100%.
Bootstrap support for A3LS77 as seed ortholog is 100%.

Group of orthologs #1221. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3JJM3              	100.00%		A3GFA9              	100.00%
Bootstrap support for G3JJM3 as seed ortholog is 100%.
Bootstrap support for A3GFA9 as seed ortholog is 100%.

Group of orthologs #1222. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:252

G3JJ28              	100.00%		A3GHF5              	100.00%
Bootstrap support for G3JJ28 as seed ortholog is 100%.
Bootstrap support for A3GHF5 as seed ortholog is 100%.

Group of orthologs #1223. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3JGK0              	100.00%		A3LPD0              	100.00%
Bootstrap support for G3JGK0 as seed ortholog is 100%.
Bootstrap support for A3LPD0 as seed ortholog is 100%.

Group of orthologs #1224. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3JKC6              	100.00%		A3GHR5              	100.00%
Bootstrap support for G3JKC6 as seed ortholog is 100%.
Bootstrap support for A3GHR5 as seed ortholog is 100%.

Group of orthologs #1225. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3JE08              	100.00%		A3LWU8              	100.00%
Bootstrap support for G3JE08 as seed ortholog is 100%.
Bootstrap support for A3LWU8 as seed ortholog is 100%.

Group of orthologs #1226. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:186

G3JK87              	100.00%		A3LYH8              	100.00%
Bootstrap support for G3JK87 as seed ortholog is 100%.
Bootstrap support for A3LYH8 as seed ortholog is 99%.

Group of orthologs #1227. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3JLH2              	100.00%		A3LY94              	100.00%
Bootstrap support for G3JLH2 as seed ortholog is 100%.
Bootstrap support for A3LY94 as seed ortholog is 100%.

Group of orthologs #1228. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 S.stipitis:302

G3JSD0              	100.00%		A3LZB6              	100.00%
Bootstrap support for G3JSD0 as seed ortholog is 100%.
Bootstrap support for A3LZB6 as seed ortholog is 100%.

Group of orthologs #1229. Best score 301 bits
Score difference with first non-orthologous sequence - C.militaris:301 S.stipitis:301

G3J8M5              	100.00%		A3GHX9              	100.00%
Bootstrap support for G3J8M5 as seed ortholog is 100%.
Bootstrap support for A3GHX9 as seed ortholog is 100%.

Group of orthologs #1230. Best score 301 bits
Score difference with first non-orthologous sequence - C.militaris:301 S.stipitis:301

G3J358              	100.00%		A3LSX0              	100.00%
Bootstrap support for G3J358 as seed ortholog is 100%.
Bootstrap support for A3LSX0 as seed ortholog is 100%.

Group of orthologs #1231. Best score 301 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:150

G3JCW5              	100.00%		A3GG57              	100.00%
Bootstrap support for G3JCW5 as seed ortholog is 98%.
Bootstrap support for A3GG57 as seed ortholog is 99%.

Group of orthologs #1232. Best score 301 bits
Score difference with first non-orthologous sequence - C.militaris:301 S.stipitis:301

G3JIG1              	100.00%		A3LWW1              	100.00%
Bootstrap support for G3JIG1 as seed ortholog is 100%.
Bootstrap support for A3LWW1 as seed ortholog is 100%.

Group of orthologs #1233. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:162 S.stipitis:152

G3JGT2              	100.00%		A3LPQ5              	100.00%
G3JPB8              	6.65%		A3GIC4              	10.02%
                    	       		A3LQZ9              	6.93%
Bootstrap support for G3JGT2 as seed ortholog is 99%.
Bootstrap support for A3LPQ5 as seed ortholog is 99%.

Group of orthologs #1234. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:90

G3J727              	100.00%		A3GHC3              	100.00%
                    	       		A3LQX7              	48.04%
Bootstrap support for G3J727 as seed ortholog is 99%.
Bootstrap support for A3GHC3 as seed ortholog is 99%.

Group of orthologs #1235. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JCQ0              	100.00%		A3GG79              	100.00%
Bootstrap support for G3JCQ0 as seed ortholog is 100%.
Bootstrap support for A3GG79 as seed ortholog is 100%.

Group of orthologs #1236. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JA42              	100.00%		A3LNS4              	100.00%
Bootstrap support for G3JA42 as seed ortholog is 100%.
Bootstrap support for A3LNS4 as seed ortholog is 100%.

Group of orthologs #1237. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3J986              	100.00%		A3LR03              	100.00%
Bootstrap support for G3J986 as seed ortholog is 100%.
Bootstrap support for A3LR03 as seed ortholog is 100%.

Group of orthologs #1238. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JH66              	100.00%		A3GHB5              	100.00%
Bootstrap support for G3JH66 as seed ortholog is 100%.
Bootstrap support for A3GHB5 as seed ortholog is 100%.

Group of orthologs #1239. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JFE3              	100.00%		A3LNX3              	100.00%
Bootstrap support for G3JFE3 as seed ortholog is 100%.
Bootstrap support for A3LNX3 as seed ortholog is 100%.

Group of orthologs #1240. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:212

G3JDQ0              	100.00%		A3LVB4              	100.00%
Bootstrap support for G3JDQ0 as seed ortholog is 100%.
Bootstrap support for A3LVB4 as seed ortholog is 99%.

Group of orthologs #1241. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JJY9              	100.00%		A3LP31              	100.00%
Bootstrap support for G3JJY9 as seed ortholog is 100%.
Bootstrap support for A3LP31 as seed ortholog is 100%.

Group of orthologs #1242. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JNG2              	100.00%		A3LRW9              	100.00%
Bootstrap support for G3JNG2 as seed ortholog is 100%.
Bootstrap support for A3LRW9 as seed ortholog is 100%.

Group of orthologs #1243. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 S.stipitis:300

G3JUT6              	100.00%		A3LMY4              	100.00%
Bootstrap support for G3JUT6 as seed ortholog is 100%.
Bootstrap support for A3LMY4 as seed ortholog is 100%.

Group of orthologs #1244. Best score 299 bits
Score difference with first non-orthologous sequence - C.militaris:299 S.stipitis:299

G3J3T0              	100.00%		A3LNK3              	100.00%
Bootstrap support for G3J3T0 as seed ortholog is 100%.
Bootstrap support for A3LNK3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 299 bits
Score difference with first non-orthologous sequence - C.militaris:299 S.stipitis:299

G3J593              	100.00%		A3LW69              	100.00%
Bootstrap support for G3J593 as seed ortholog is 100%.
Bootstrap support for A3LW69 as seed ortholog is 100%.

Group of orthologs #1246. Best score 299 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:217

G3JII2              	100.00%		A3LNS1              	100.00%
Bootstrap support for G3JII2 as seed ortholog is 99%.
Bootstrap support for A3LNS1 as seed ortholog is 100%.

Group of orthologs #1247. Best score 299 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:16

G3JHD0              	100.00%		A3M0M6              	100.00%
Bootstrap support for G3JHD0 as seed ortholog is 100%.
Bootstrap support for A3M0M6 as seed ortholog is 63%.
Alternative seed ortholog is A3LW09 (16 bits away from this cluster)

Group of orthologs #1248. Best score 298 bits
Score difference with first non-orthologous sequence - C.militaris:298 S.stipitis:298

G3J7D0              	100.00%		A3LZM8              	100.00%
Bootstrap support for G3J7D0 as seed ortholog is 100%.
Bootstrap support for A3LZM8 as seed ortholog is 100%.

Group of orthologs #1249. Best score 298 bits
Score difference with first non-orthologous sequence - C.militaris:298 S.stipitis:298

G3JCQ6              	100.00%		A3M0D7              	100.00%
Bootstrap support for G3JCQ6 as seed ortholog is 100%.
Bootstrap support for A3M0D7 as seed ortholog is 100%.

Group of orthologs #1250. Best score 298 bits
Score difference with first non-orthologous sequence - C.militaris:298 S.stipitis:190

G3JST5              	100.00%		A3LP79              	100.00%
Bootstrap support for G3JST5 as seed ortholog is 100%.
Bootstrap support for A3LP79 as seed ortholog is 100%.

Group of orthologs #1251. Best score 298 bits
Score difference with first non-orthologous sequence - C.militaris:298 S.stipitis:298

G3JRR5              	100.00%		A3LQB9              	100.00%
Bootstrap support for G3JRR5 as seed ortholog is 100%.
Bootstrap support for A3LQB9 as seed ortholog is 100%.

Group of orthologs #1252. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:297

G3J6V5              	100.00%		A3GFV0              	100.00%
Bootstrap support for G3J6V5 as seed ortholog is 99%.
Bootstrap support for A3GFV0 as seed ortholog is 100%.

Group of orthologs #1253. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:297 S.stipitis:297

G3J6G6              	100.00%		A3LN15              	100.00%
Bootstrap support for G3J6G6 as seed ortholog is 100%.
Bootstrap support for A3LN15 as seed ortholog is 100%.

Group of orthologs #1254. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:297 S.stipitis:297

G3JMD1              	100.00%		A3LXB8              	100.00%
Bootstrap support for G3JMD1 as seed ortholog is 100%.
Bootstrap support for A3LXB8 as seed ortholog is 100%.

Group of orthologs #1255. Best score 296 bits
Score difference with first non-orthologous sequence - C.militaris:296 S.stipitis:296

G3J3R1              	100.00%		A3LP06              	100.00%
Bootstrap support for G3J3R1 as seed ortholog is 100%.
Bootstrap support for A3LP06 as seed ortholog is 100%.

Group of orthologs #1256. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:295

G3J4P5              	100.00%		A3LY66              	100.00%
Bootstrap support for G3J4P5 as seed ortholog is 99%.
Bootstrap support for A3LY66 as seed ortholog is 100%.

Group of orthologs #1257. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:295 S.stipitis:295

G3JJR8              	100.00%		A3GGM7              	100.00%
Bootstrap support for G3JJR8 as seed ortholog is 100%.
Bootstrap support for A3GGM7 as seed ortholog is 100%.

Group of orthologs #1258. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:295 S.stipitis:295

G3JGQ4              	100.00%		A3LXR8              	100.00%
Bootstrap support for G3JGQ4 as seed ortholog is 100%.
Bootstrap support for A3LXR8 as seed ortholog is 100%.

Group of orthologs #1259. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:295 S.stipitis:295

G3JHM1              	100.00%		A3LY56              	100.00%
Bootstrap support for G3JHM1 as seed ortholog is 100%.
Bootstrap support for A3LY56 as seed ortholog is 100%.

Group of orthologs #1260. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:295 S.stipitis:228

G3JMF3              	100.00%		A3LW96              	100.00%
Bootstrap support for G3JMF3 as seed ortholog is 100%.
Bootstrap support for A3LW96 as seed ortholog is 100%.

Group of orthologs #1261. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 S.stipitis:294

G3J6F1              	100.00%		A3LN21              	100.00%
Bootstrap support for G3J6F1 as seed ortholog is 100%.
Bootstrap support for A3LN21 as seed ortholog is 100%.

Group of orthologs #1262. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:163

G3J561              	100.00%		A3LSU5              	100.00%
Bootstrap support for G3J561 as seed ortholog is 99%.
Bootstrap support for A3LSU5 as seed ortholog is 99%.

Group of orthologs #1263. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 S.stipitis:294

G3J333              	100.00%		A3LW07              	100.00%
Bootstrap support for G3J333 as seed ortholog is 100%.
Bootstrap support for A3LW07 as seed ortholog is 100%.

Group of orthologs #1264. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 S.stipitis:294

G3J8Q3              	100.00%		A3LVV0              	100.00%
Bootstrap support for G3J8Q3 as seed ortholog is 100%.
Bootstrap support for A3LVV0 as seed ortholog is 100%.

Group of orthologs #1265. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 S.stipitis:294

G3JF99              	100.00%		A3LU28              	100.00%
Bootstrap support for G3JF99 as seed ortholog is 100%.
Bootstrap support for A3LU28 as seed ortholog is 100%.

Group of orthologs #1266. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:122

G3JFN2              	100.00%		A3LV16              	100.00%
Bootstrap support for G3JFN2 as seed ortholog is 99%.
Bootstrap support for A3LV16 as seed ortholog is 98%.

Group of orthologs #1267. Best score 293 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:95

G3J500              	100.00%		A3LNN2              	100.00%
Bootstrap support for G3J500 as seed ortholog is 100%.
Bootstrap support for A3LNN2 as seed ortholog is 98%.

Group of orthologs #1268. Best score 293 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:87

G3JAV5              	100.00%		A3GF86              	100.00%
Bootstrap support for G3JAV5 as seed ortholog is 97%.
Bootstrap support for A3GF86 as seed ortholog is 99%.

Group of orthologs #1269. Best score 293 bits
Score difference with first non-orthologous sequence - C.militaris:293 S.stipitis:293

G3J5X7              	100.00%		A3LT87              	100.00%
Bootstrap support for G3J5X7 as seed ortholog is 100%.
Bootstrap support for A3LT87 as seed ortholog is 100%.

Group of orthologs #1270. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:178

G3JLJ9              	100.00%		P22144              	100.00%
G3JFB2              	60.51%		
Bootstrap support for G3JLJ9 as seed ortholog is 99%.
Bootstrap support for P22144 as seed ortholog is 100%.

Group of orthologs #1271. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:292

G3J3Q6              	100.00%		A3LSZ1              	100.00%
Bootstrap support for G3J3Q6 as seed ortholog is 84%.
Bootstrap support for A3LSZ1 as seed ortholog is 100%.

Group of orthologs #1272. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:292 S.stipitis:292

G3J9F9              	100.00%		A3LWT5              	100.00%
Bootstrap support for G3J9F9 as seed ortholog is 100%.
Bootstrap support for A3LWT5 as seed ortholog is 100%.

Group of orthologs #1273. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:292 S.stipitis:292

G3JEL9              	100.00%		A3LUF8              	100.00%
Bootstrap support for G3JEL9 as seed ortholog is 100%.
Bootstrap support for A3LUF8 as seed ortholog is 100%.

Group of orthologs #1274. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:130

G3JKJ0              	100.00%		A3LRC1              	100.00%
Bootstrap support for G3JKJ0 as seed ortholog is 99%.
Bootstrap support for A3LRC1 as seed ortholog is 99%.

Group of orthologs #1275. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 S.stipitis:291

G3JD11              	100.00%		A3GFF0              	100.00%
Bootstrap support for G3JD11 as seed ortholog is 100%.
Bootstrap support for A3GFF0 as seed ortholog is 100%.

Group of orthologs #1276. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 S.stipitis:186

G3JGM5              	100.00%		A3GEX4              	100.00%
Bootstrap support for G3JGM5 as seed ortholog is 100%.
Bootstrap support for A3GEX4 as seed ortholog is 100%.

Group of orthologs #1277. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 S.stipitis:291

G3J3U1              	100.00%		A3M0D6              	100.00%
Bootstrap support for G3J3U1 as seed ortholog is 100%.
Bootstrap support for A3M0D6 as seed ortholog is 100%.

Group of orthologs #1278. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 S.stipitis:291

G3J8W6              	100.00%		Q9C1D4              	100.00%
Bootstrap support for G3J8W6 as seed ortholog is 100%.
Bootstrap support for Q9C1D4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:235 S.stipitis:290

G3JF67              	100.00%		A3LQN8              	100.00%
Bootstrap support for G3JF67 as seed ortholog is 100%.
Bootstrap support for A3LQN8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:167

G3JRW2              	100.00%		A3LY79              	100.00%
Bootstrap support for G3JRW2 as seed ortholog is 99%.
Bootstrap support for A3LY79 as seed ortholog is 99%.

Group of orthologs #1281. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 S.stipitis:289

G3J904              	100.00%		A3GEZ2              	100.00%
Bootstrap support for G3J904 as seed ortholog is 100%.
Bootstrap support for A3GEZ2 as seed ortholog is 100%.

Group of orthologs #1282. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:215 S.stipitis:289

G3J4T2              	100.00%		A3LRU7              	100.00%
Bootstrap support for G3J4T2 as seed ortholog is 100%.
Bootstrap support for A3LRU7 as seed ortholog is 100%.

Group of orthologs #1283. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 S.stipitis:289

G3JET7              	100.00%		A3GF98              	100.00%
Bootstrap support for G3JET7 as seed ortholog is 100%.
Bootstrap support for A3GF98 as seed ortholog is 100%.

Group of orthologs #1284. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 S.stipitis:289

G3J9R1              	100.00%		A3LVP9              	100.00%
Bootstrap support for G3J9R1 as seed ortholog is 100%.
Bootstrap support for A3LVP9 as seed ortholog is 100%.

Group of orthologs #1285. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 S.stipitis:289

G3JJN6              	100.00%		A3LSD1              	100.00%
Bootstrap support for G3JJN6 as seed ortholog is 100%.
Bootstrap support for A3LSD1 as seed ortholog is 100%.

Group of orthologs #1286. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 S.stipitis:289

G3JGB9              	100.00%		A3LWM6              	100.00%
Bootstrap support for G3JGB9 as seed ortholog is 100%.
Bootstrap support for A3LWM6 as seed ortholog is 100%.

Group of orthologs #1287. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:88

G3J6J5              	100.00%		A3LRU9              	100.00%
                    	       		A3LSD4              	37.50%
Bootstrap support for G3J6J5 as seed ortholog is 99%.
Bootstrap support for A3LRU9 as seed ortholog is 99%.

Group of orthologs #1288. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:35

G3JBL7              	100.00%		A3LUM2              	100.00%
                    	       		A3LPQ4              	7.84%
Bootstrap support for G3JBL7 as seed ortholog is 98%.
Bootstrap support for A3LUM2 as seed ortholog is 81%.

Group of orthologs #1289. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:152 S.stipitis:155

G3JV34              	100.00%		A3LQV8              	100.00%
                    	       		A3LNB8              	7.86%
Bootstrap support for G3JV34 as seed ortholog is 99%.
Bootstrap support for A3LQV8 as seed ortholog is 99%.

Group of orthologs #1290. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 S.stipitis:288

G3J5X1              	100.00%		A3LQX1              	100.00%
Bootstrap support for G3J5X1 as seed ortholog is 100%.
Bootstrap support for A3LQX1 as seed ortholog is 100%.

Group of orthologs #1291. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 S.stipitis:288

G3JDG9              	100.00%		A3GGJ6              	100.00%
Bootstrap support for G3JDG9 as seed ortholog is 100%.
Bootstrap support for A3GGJ6 as seed ortholog is 100%.

Group of orthologs #1292. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 S.stipitis:288

G3JLE9              	100.00%		A3LTN2              	100.00%
Bootstrap support for G3JLE9 as seed ortholog is 100%.
Bootstrap support for A3LTN2 as seed ortholog is 100%.

Group of orthologs #1293. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 S.stipitis:288

G3JI00              	100.00%		A3LZ84              	100.00%
Bootstrap support for G3JI00 as seed ortholog is 100%.
Bootstrap support for A3LZ84 as seed ortholog is 100%.

Group of orthologs #1294. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 S.stipitis:287

G3J8H0              	100.00%		A3LWT2              	100.00%
G3JGX9              	11.93%		
Bootstrap support for G3J8H0 as seed ortholog is 100%.
Bootstrap support for A3LWT2 as seed ortholog is 100%.

Group of orthologs #1295. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:185 S.stipitis:287

G3J6I7              	100.00%		A3LZL0              	100.00%
Bootstrap support for G3J6I7 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #1296. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 S.stipitis:5

G3JIF5              	100.00%		A3LR71              	100.00%
Bootstrap support for G3JIF5 as seed ortholog is 100%.
Bootstrap support for A3LR71 as seed ortholog is 56%.
Alternative seed ortholog is A3LZI1 (5 bits away from this cluster)

Group of orthologs #1297. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 S.stipitis:287

G3JI69              	100.00%		A3LT20              	100.00%
Bootstrap support for G3JI69 as seed ortholog is 100%.
Bootstrap support for A3LT20 as seed ortholog is 100%.

Group of orthologs #1298. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 S.stipitis:287

G3JJY8              	100.00%		A3LWA7              	100.00%
Bootstrap support for G3JJY8 as seed ortholog is 100%.
Bootstrap support for A3LWA7 as seed ortholog is 100%.

Group of orthologs #1299. Best score 286 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:180

G3J3T4              	100.00%		A3LTX0              	100.00%
Bootstrap support for G3J3T4 as seed ortholog is 100%.
Bootstrap support for A3LTX0 as seed ortholog is 100%.

Group of orthologs #1300. Best score 286 bits
Score difference with first non-orthologous sequence - C.militaris:286 S.stipitis:286

G3J686              	100.00%		A3LVE6              	100.00%
Bootstrap support for G3J686 as seed ortholog is 100%.
Bootstrap support for A3LVE6 as seed ortholog is 100%.

Group of orthologs #1301. Best score 286 bits
Score difference with first non-orthologous sequence - C.militaris:286 S.stipitis:286

G3JJB7              	100.00%		A3GHJ7              	100.00%
Bootstrap support for G3JJB7 as seed ortholog is 100%.
Bootstrap support for A3GHJ7 as seed ortholog is 100%.

Group of orthologs #1302. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:285

G3JAG6              	100.00%		A3LYQ1              	100.00%
G3JAS8              	9.38%		
Bootstrap support for G3JAG6 as seed ortholog is 98%.
Bootstrap support for A3LYQ1 as seed ortholog is 100%.

Group of orthologs #1303. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:229 S.stipitis:285

G3JS55              	100.00%		A3M014              	100.00%
                    	       		A3LRY0              	37.96%
Bootstrap support for G3JS55 as seed ortholog is 100%.
Bootstrap support for A3M014 as seed ortholog is 100%.

Group of orthologs #1304. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 S.stipitis:285

G3J569              	100.00%		A3LR62              	100.00%
Bootstrap support for G3J569 as seed ortholog is 100%.
Bootstrap support for A3LR62 as seed ortholog is 100%.

Group of orthologs #1305. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 S.stipitis:285

G3JQ36              	100.00%		A3GFF5              	100.00%
Bootstrap support for G3JQ36 as seed ortholog is 100%.
Bootstrap support for A3GFF5 as seed ortholog is 100%.

Group of orthologs #1306. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 S.stipitis:285

G3JL34              	100.00%		A3LT77              	100.00%
Bootstrap support for G3JL34 as seed ortholog is 100%.
Bootstrap support for A3LT77 as seed ortholog is 100%.

Group of orthologs #1307. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 S.stipitis:285

G3JMR6              	100.00%		A3LRQ6              	100.00%
Bootstrap support for G3JMR6 as seed ortholog is 100%.
Bootstrap support for A3LRQ6 as seed ortholog is 100%.

Group of orthologs #1308. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 S.stipitis:55

G3JLG0              	100.00%		A3LZW5              	100.00%
Bootstrap support for G3JLG0 as seed ortholog is 100%.
Bootstrap support for A3LZW5 as seed ortholog is 95%.

Group of orthologs #1309. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:284

G3JGP9              	100.00%		A3GHS5              	100.00%
                    	       		A3LN35              	9.22%
Bootstrap support for G3JGP9 as seed ortholog is 100%.
Bootstrap support for A3GHS5 as seed ortholog is 100%.

Group of orthologs #1310. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:80

G3J2M5              	100.00%		A3LSU2              	100.00%
Bootstrap support for G3J2M5 as seed ortholog is 98%.
Bootstrap support for A3LSU2 as seed ortholog is 96%.

Group of orthologs #1311. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:52

G3J6E6              	100.00%		A3LUB0              	100.00%
Bootstrap support for G3J6E6 as seed ortholog is 99%.
Bootstrap support for A3LUB0 as seed ortholog is 97%.

Group of orthologs #1312. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:284

G3J5N3              	100.00%		A3LYH1              	100.00%
Bootstrap support for G3J5N3 as seed ortholog is 100%.
Bootstrap support for A3LYH1 as seed ortholog is 100%.

Group of orthologs #1313. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:284

G3JDB1              	100.00%		A3LRX9              	100.00%
Bootstrap support for G3JDB1 as seed ortholog is 100%.
Bootstrap support for A3LRX9 as seed ortholog is 100%.

Group of orthologs #1314. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:284

G3JJ74              	100.00%		A3LNJ4              	100.00%
Bootstrap support for G3JJ74 as seed ortholog is 100%.
Bootstrap support for A3LNJ4 as seed ortholog is 100%.

Group of orthologs #1315. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:44

G3JIF9              	100.00%		A3LQ00              	100.00%
Bootstrap support for G3JIF9 as seed ortholog is 100%.
Bootstrap support for A3LQ00 as seed ortholog is 89%.

Group of orthologs #1316. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:284

G3JPJ8              	100.00%		A3GFQ8              	100.00%
Bootstrap support for G3JPJ8 as seed ortholog is 100%.
Bootstrap support for A3GFQ8 as seed ortholog is 100%.

Group of orthologs #1317. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:203

G3JKS8              	100.00%		A3LQ14              	100.00%
Bootstrap support for G3JKS8 as seed ortholog is 100%.
Bootstrap support for A3LQ14 as seed ortholog is 100%.

Group of orthologs #1318. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:284

G3JN75              	100.00%		A3LQN3              	100.00%
Bootstrap support for G3JN75 as seed ortholog is 100%.
Bootstrap support for A3LQN3 as seed ortholog is 100%.

Group of orthologs #1319. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 S.stipitis:284

G3JR78              	100.00%		A3LSW8              	100.00%
Bootstrap support for G3JR78 as seed ortholog is 100%.
Bootstrap support for A3LSW8 as seed ortholog is 100%.

Group of orthologs #1320. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:283

G3JHJ2              	100.00%		A3LS44              	100.00%
Bootstrap support for G3JHJ2 as seed ortholog is 100%.
Bootstrap support for A3LS44 as seed ortholog is 100%.

Group of orthologs #1321. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:283

G3JLT3              	100.00%		A3LRF6              	100.00%
Bootstrap support for G3JLT3 as seed ortholog is 100%.
Bootstrap support for A3LRF6 as seed ortholog is 100%.

Group of orthologs #1322. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:283 S.stipitis:283

G3JNV3              	100.00%		A3LPI7              	100.00%
Bootstrap support for G3JNV3 as seed ortholog is 100%.
Bootstrap support for A3LPI7 as seed ortholog is 100%.

Group of orthologs #1323. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:222 S.stipitis:283

G3JFF9              	100.00%		A3LYA3              	100.00%
Bootstrap support for G3JFF9 as seed ortholog is 100%.
Bootstrap support for A3LYA3 as seed ortholog is 100%.

Group of orthologs #1324. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:200

G3JHI2              	100.00%		A3LZ63              	100.00%
G3J6S3              	100.00%		A3LZ62              	100.00%
G3JPE8              	100.00%		A3LRQ3              	100.00%
G3JKR3              	25.09%		A3LWY8              	24.26%
G3JJ57              	21.88%		A3LWY9              	24.04%
G3J3C5              	21.16%		A3LWL3              	18.46%
G3JU66              	18.03%		A3GGI3              	18.35%
G3J6F9              	15.76%		
G3JTF4              	15.50%		
G3J2Y8              	14.51%		
G3JDZ1              	9.30%		
G3JGL5              	7.60%		
G3JMI8              	7.50%		
Bootstrap support for G3JHI2 as seed ortholog is 99%.
Bootstrap support for G3J6S3 as seed ortholog is 98%.
Bootstrap support for G3JPE8 as seed ortholog is 95%.
Bootstrap support for A3LZ63 as seed ortholog is 99%.
Bootstrap support for A3LZ62 as seed ortholog is 99%.
Bootstrap support for A3LRQ3 as seed ortholog is 99%.

Group of orthologs #1325. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:282 S.stipitis:282

G3JE14              	100.00%		A3GEZ3              	100.00%
Bootstrap support for G3JE14 as seed ortholog is 100%.
Bootstrap support for A3GEZ3 as seed ortholog is 100%.

Group of orthologs #1326. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:282 S.stipitis:282

G3JQC1              	100.00%		A3GHB2              	100.00%
Bootstrap support for G3JQC1 as seed ortholog is 100%.
Bootstrap support for A3GHB2 as seed ortholog is 100%.

Group of orthologs #1327. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:189 S.stipitis:170

G3JLF9              	100.00%		A3LSP1              	100.00%
                    	       		A3LRT1              	37.54%
Bootstrap support for G3JLF9 as seed ortholog is 99%.
Bootstrap support for A3LSP1 as seed ortholog is 100%.

Group of orthologs #1328. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 S.stipitis:281

G3J3H5              	100.00%		A3LWH8              	100.00%
Bootstrap support for G3J3H5 as seed ortholog is 100%.
Bootstrap support for A3LWH8 as seed ortholog is 100%.

Group of orthologs #1329. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 S.stipitis:281

G3J4D7              	100.00%		A3LZ60              	100.00%
Bootstrap support for G3J4D7 as seed ortholog is 100%.
Bootstrap support for A3LZ60 as seed ortholog is 100%.

Group of orthologs #1330. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 S.stipitis:191

G3JQ67              	100.00%		A3LPF8              	100.00%
Bootstrap support for G3JQ67 as seed ortholog is 100%.
Bootstrap support for A3LPF8 as seed ortholog is 99%.

Group of orthologs #1331. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 S.stipitis:281

G3JTK1              	100.00%		A3GI33              	100.00%
Bootstrap support for G3JTK1 as seed ortholog is 100%.
Bootstrap support for A3GI33 as seed ortholog is 100%.

Group of orthologs #1332. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 S.stipitis:281

G3JNB9              	100.00%		A3LVD1              	100.00%
Bootstrap support for G3JNB9 as seed ortholog is 100%.
Bootstrap support for A3LVD1 as seed ortholog is 100%.

Group of orthologs #1333. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3J4Q9              	100.00%		A3GHZ5              	100.00%
Bootstrap support for G3J4Q9 as seed ortholog is 100%.
Bootstrap support for A3GHZ5 as seed ortholog is 100%.

Group of orthologs #1334. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3J777              	100.00%		A3LPI6              	100.00%
Bootstrap support for G3J777 as seed ortholog is 100%.
Bootstrap support for A3LPI6 as seed ortholog is 100%.

Group of orthologs #1335. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3J2P0              	100.00%		A3LUI8              	100.00%
Bootstrap support for G3J2P0 as seed ortholog is 100%.
Bootstrap support for A3LUI8 as seed ortholog is 100%.

Group of orthologs #1336. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3J4C7              	100.00%		A3LUT8              	100.00%
Bootstrap support for G3J4C7 as seed ortholog is 100%.
Bootstrap support for A3LUT8 as seed ortholog is 100%.

Group of orthologs #1337. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3JPP8              	100.00%		A3LP59              	100.00%
Bootstrap support for G3JPP8 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #1338. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3JL43              	100.00%		A3LV07              	100.00%
Bootstrap support for G3JL43 as seed ortholog is 100%.
Bootstrap support for A3LV07 as seed ortholog is 100%.

Group of orthologs #1339. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 S.stipitis:280

G3JN47              	100.00%		A3LX69              	100.00%
Bootstrap support for G3JN47 as seed ortholog is 100%.
Bootstrap support for A3LX69 as seed ortholog is 100%.

Group of orthologs #1340. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:279

G3J3N3              	100.00%		A3LUJ2              	100.00%
Bootstrap support for G3J3N3 as seed ortholog is 100%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #1341. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:279

G3J8P9              	100.00%		A3LZB8              	100.00%
Bootstrap support for G3J8P9 as seed ortholog is 100%.
Bootstrap support for A3LZB8 as seed ortholog is 100%.

Group of orthologs #1342. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:105

G3JI60              	100.00%		A3LSZ8              	100.00%
Bootstrap support for G3JI60 as seed ortholog is 99%.
Bootstrap support for A3LSZ8 as seed ortholog is 99%.

Group of orthologs #1343. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:279

G3JJQ9              	100.00%		A3LVX7              	100.00%
Bootstrap support for G3JJQ9 as seed ortholog is 100%.
Bootstrap support for A3LVX7 as seed ortholog is 100%.

Group of orthologs #1344. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:279

G3JGT4              	100.00%		A3LZE3              	100.00%
Bootstrap support for G3JGT4 as seed ortholog is 100%.
Bootstrap support for A3LZE3 as seed ortholog is 100%.

Group of orthologs #1345. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:279

G3JPA8              	100.00%		A3LTC2              	100.00%
Bootstrap support for G3JPA8 as seed ortholog is 100%.
Bootstrap support for A3LTC2 as seed ortholog is 100%.

Group of orthologs #1346. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:279

G3JR17              	100.00%		A3LS21              	100.00%
Bootstrap support for G3JR17 as seed ortholog is 100%.
Bootstrap support for A3LS21 as seed ortholog is 100%.

Group of orthologs #1347. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:150

G3JLH8              	100.00%		A3LX94              	100.00%
Bootstrap support for G3JLH8 as seed ortholog is 100%.
Bootstrap support for A3LX94 as seed ortholog is 99%.

Group of orthologs #1348. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 S.stipitis:279

G3JU99              	100.00%		A3LQV1              	100.00%
Bootstrap support for G3JU99 as seed ortholog is 100%.
Bootstrap support for A3LQV1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 278 bits
Score difference with first non-orthologous sequence - C.militaris:278 S.stipitis:278

G3JTY4              	100.00%		A3LNL9              	100.00%
Bootstrap support for G3JTY4 as seed ortholog is 100%.
Bootstrap support for A3LNL9 as seed ortholog is 100%.

Group of orthologs #1350. Best score 278 bits
Score difference with first non-orthologous sequence - C.militaris:278 S.stipitis:278

G3JTM6              	100.00%		A3LPR2              	100.00%
Bootstrap support for G3JTM6 as seed ortholog is 100%.
Bootstrap support for A3LPR2 as seed ortholog is 100%.

Group of orthologs #1351. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:277 S.stipitis:277

G3J357              	100.00%		A3LXG1              	100.00%
Bootstrap support for G3J357 as seed ortholog is 100%.
Bootstrap support for A3LXG1 as seed ortholog is 100%.

Group of orthologs #1352. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:277

G3JDT5              	100.00%		A3LMT4              	100.00%
Bootstrap support for G3JDT5 as seed ortholog is 99%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #1353. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:277 S.stipitis:277

G3JBH0              	100.00%		A3LWH6              	100.00%
Bootstrap support for G3JBH0 as seed ortholog is 100%.
Bootstrap support for A3LWH6 as seed ortholog is 100%.

Group of orthologs #1354. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:277 S.stipitis:277

G3JJN7              	100.00%		A3LP10              	100.00%
Bootstrap support for G3JJN7 as seed ortholog is 100%.
Bootstrap support for A3LP10 as seed ortholog is 100%.

Group of orthologs #1355. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:277 S.stipitis:277

G3JT26              	100.00%		A3GFB5              	100.00%
Bootstrap support for G3JT26 as seed ortholog is 100%.
Bootstrap support for A3GFB5 as seed ortholog is 100%.

Group of orthologs #1356. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:277

G3JU78              	100.00%		A3LW77              	100.00%
Bootstrap support for G3JU78 as seed ortholog is 92%.
Bootstrap support for A3LW77 as seed ortholog is 100%.

Group of orthologs #1357. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:276 S.stipitis:276

G3J6H9              	100.00%		A3GGM1              	100.00%
Bootstrap support for G3J6H9 as seed ortholog is 100%.
Bootstrap support for A3GGM1 as seed ortholog is 100%.

Group of orthologs #1358. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:63

G3J983              	100.00%		A3LWN8              	100.00%
Bootstrap support for G3J983 as seed ortholog is 100%.
Bootstrap support for A3LWN8 as seed ortholog is 92%.

Group of orthologs #1359. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:276 S.stipitis:276

G3JMJ4              	100.00%		A3GGF1              	100.00%
Bootstrap support for G3JMJ4 as seed ortholog is 100%.
Bootstrap support for A3GGF1 as seed ortholog is 100%.

Group of orthologs #1360. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3J2Z9              	100.00%		A3LUI6              	100.00%
Bootstrap support for G3J2Z9 as seed ortholog is 100%.
Bootstrap support for A3LUI6 as seed ortholog is 100%.

Group of orthologs #1361. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3JDY9              	100.00%		A3GFG9              	100.00%
Bootstrap support for G3JDY9 as seed ortholog is 100%.
Bootstrap support for A3GFG9 as seed ortholog is 100%.

Group of orthologs #1362. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3JB39              	100.00%		A3LNB4              	100.00%
Bootstrap support for G3JB39 as seed ortholog is 100%.
Bootstrap support for A3LNB4 as seed ortholog is 100%.

Group of orthologs #1363. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3J7J4              	100.00%		A3LTU9              	100.00%
Bootstrap support for G3J7J4 as seed ortholog is 100%.
Bootstrap support for A3LTU9 as seed ortholog is 100%.

Group of orthologs #1364. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3J8D2              	100.00%		A3LTC5              	100.00%
Bootstrap support for G3J8D2 as seed ortholog is 100%.
Bootstrap support for A3LTC5 as seed ortholog is 100%.

Group of orthologs #1365. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:42 S.stipitis:108

G3J9N6              	100.00%		A3LT71              	100.00%
Bootstrap support for G3J9N6 as seed ortholog is 88%.
Bootstrap support for A3LT71 as seed ortholog is 99%.

Group of orthologs #1366. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3JHA0              	100.00%		A3LQA0              	100.00%
Bootstrap support for G3JHA0 as seed ortholog is 100%.
Bootstrap support for A3LQA0 as seed ortholog is 100%.

Group of orthologs #1367. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:145 S.stipitis:275

G3JDB4              	100.00%		A3LVT6              	100.00%
Bootstrap support for G3JDB4 as seed ortholog is 99%.
Bootstrap support for A3LVT6 as seed ortholog is 100%.

Group of orthologs #1368. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3JI03              	100.00%		A3LXW8              	100.00%
Bootstrap support for G3JI03 as seed ortholog is 100%.
Bootstrap support for A3LXW8 as seed ortholog is 100%.

Group of orthologs #1369. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3JNS5              	100.00%		A3LTE1              	100.00%
Bootstrap support for G3JNS5 as seed ortholog is 100%.
Bootstrap support for A3LTE1 as seed ortholog is 100%.

Group of orthologs #1370. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 S.stipitis:275

G3JMB4              	100.00%		A3LXH5              	100.00%
Bootstrap support for G3JMB4 as seed ortholog is 100%.
Bootstrap support for A3LXH5 as seed ortholog is 100%.

Group of orthologs #1371. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:218

G3J406              	100.00%		A3GGB2              	100.00%
                    	       		A3GGB1              	40.24%
Bootstrap support for G3J406 as seed ortholog is 100%.
Bootstrap support for A3GGB2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:176 S.stipitis:64

G3J8I2              	100.00%		A3LQR5              	100.00%
                    	       		A3LSD3              	27.38%
Bootstrap support for G3J8I2 as seed ortholog is 99%.
Bootstrap support for A3LQR5 as seed ortholog is 86%.

Group of orthologs #1373. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:192

G3J8Z1              	100.00%		A3LR75              	100.00%
                    	       		A3LSY6              	100.00%
Bootstrap support for G3J8Z1 as seed ortholog is 100%.
Bootstrap support for A3LR75 as seed ortholog is 100%.
Bootstrap support for A3LSY6 as seed ortholog is 100%.

Group of orthologs #1374. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:274

G3JP25              	100.00%		A3LXJ3              	100.00%
                    	       		A3LND9              	14.95%
Bootstrap support for G3JP25 as seed ortholog is 100%.
Bootstrap support for A3LXJ3 as seed ortholog is 100%.

Group of orthologs #1375. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:274

G3JBM6              	100.00%		A3GFQ9              	100.00%
Bootstrap support for G3JBM6 as seed ortholog is 100%.
Bootstrap support for A3GFQ9 as seed ortholog is 100%.

Group of orthologs #1376. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:274

G3J4B1              	100.00%		A3LZL7              	100.00%
Bootstrap support for G3J4B1 as seed ortholog is 100%.
Bootstrap support for A3LZL7 as seed ortholog is 100%.

Group of orthologs #1377. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:32

G3JCP8              	100.00%		A3LU89              	100.00%
Bootstrap support for G3JCP8 as seed ortholog is 100%.
Bootstrap support for A3LU89 as seed ortholog is 56%.
Alternative seed ortholog is A3GGU0 (32 bits away from this cluster)

Group of orthologs #1378. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:274

G3JD83              	100.00%		A3LU93              	100.00%
Bootstrap support for G3JD83 as seed ortholog is 100%.
Bootstrap support for A3LU93 as seed ortholog is 100%.

Group of orthologs #1379. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:274

G3JM15              	100.00%		A3GI78              	100.00%
Bootstrap support for G3JM15 as seed ortholog is 100%.
Bootstrap support for A3GI78 as seed ortholog is 100%.

Group of orthologs #1380. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:274

G3JQW9              	100.00%		A3GGZ5              	100.00%
Bootstrap support for G3JQW9 as seed ortholog is 100%.
Bootstrap support for A3GGZ5 as seed ortholog is 100%.

Group of orthologs #1381. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 S.stipitis:274

G3JN41              	100.00%		A3LZE9              	100.00%
Bootstrap support for G3JN41 as seed ortholog is 100%.
Bootstrap support for A3LZE9 as seed ortholog is 100%.

Group of orthologs #1382. Best score 273 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:192

G3J6F4              	100.00%		A3GH02              	100.00%
                    	       		A3GH09              	38.91%
Bootstrap support for G3J6F4 as seed ortholog is 96%.
Bootstrap support for A3GH02 as seed ortholog is 99%.

Group of orthologs #1383. Best score 273 bits
Score difference with first non-orthologous sequence - C.militaris:273 S.stipitis:273

G3J5D3              	100.00%		A3LSH4              	100.00%
Bootstrap support for G3J5D3 as seed ortholog is 100%.
Bootstrap support for A3LSH4 as seed ortholog is 100%.

Group of orthologs #1384. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:272

G3JAL4              	100.00%		A3LUM3              	100.00%
                    	       		A3LU47              	6.50%
Bootstrap support for G3JAL4 as seed ortholog is 98%.
Bootstrap support for A3LUM3 as seed ortholog is 100%.

Group of orthologs #1385. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:272

G3J4K5              	100.00%		A3GHK3              	100.00%
Bootstrap support for G3J4K5 as seed ortholog is 100%.
Bootstrap support for A3GHK3 as seed ortholog is 100%.

Group of orthologs #1386. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 S.stipitis:272

G3J6V3              	100.00%		A3LPM8              	100.00%
Bootstrap support for G3J6V3 as seed ortholog is 100%.
Bootstrap support for A3LPM8 as seed ortholog is 100%.

Group of orthologs #1387. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 S.stipitis:272

G3JKF1              	100.00%		A3GF32              	100.00%
Bootstrap support for G3JKF1 as seed ortholog is 100%.
Bootstrap support for A3GF32 as seed ortholog is 100%.

Group of orthologs #1388. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 S.stipitis:272

G3JJE0              	100.00%		A3LYA0              	100.00%
Bootstrap support for G3JJE0 as seed ortholog is 100%.
Bootstrap support for A3LYA0 as seed ortholog is 100%.

Group of orthologs #1389. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:39 S.stipitis:153

G3JNZ7              	100.00%		A3GF07              	100.00%
                    	       		A3GF05              	11.74%
Bootstrap support for G3JNZ7 as seed ortholog is 86%.
Bootstrap support for A3GF07 as seed ortholog is 100%.

Group of orthologs #1390. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:271

G3J9Q5              	100.00%		A3LPE2              	100.00%
Bootstrap support for G3J9Q5 as seed ortholog is 93%.
Bootstrap support for A3LPE2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:271 S.stipitis:271

G3JGB5              	100.00%		A3LN41              	100.00%
Bootstrap support for G3JGB5 as seed ortholog is 100%.
Bootstrap support for A3LN41 as seed ortholog is 100%.

Group of orthologs #1392. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:271 S.stipitis:125

G3JPT8              	100.00%		A3GFE3              	100.00%
Bootstrap support for G3JPT8 as seed ortholog is 100%.
Bootstrap support for A3GFE3 as seed ortholog is 98%.

Group of orthologs #1393. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 S.stipitis:270

G3J309              	100.00%		A3GFI0              	100.00%
Bootstrap support for G3J309 as seed ortholog is 100%.
Bootstrap support for A3GFI0 as seed ortholog is 100%.

Group of orthologs #1394. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 S.stipitis:270

G3JJA7              	100.00%		A3GIA3              	100.00%
Bootstrap support for G3JJA7 as seed ortholog is 100%.
Bootstrap support for A3GIA3 as seed ortholog is 100%.

Group of orthologs #1395. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 S.stipitis:270

G3JA62              	100.00%		A3LX03              	100.00%
Bootstrap support for G3JA62 as seed ortholog is 100%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #1396. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 S.stipitis:270

G3JEK2              	100.00%		A3LT67              	100.00%
Bootstrap support for G3JEK2 as seed ortholog is 100%.
Bootstrap support for A3LT67 as seed ortholog is 100%.

Group of orthologs #1397. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 S.stipitis:270

G3JLI0              	100.00%		A3LPX5              	100.00%
Bootstrap support for G3JLI0 as seed ortholog is 100%.
Bootstrap support for A3LPX5 as seed ortholog is 100%.

Group of orthologs #1398. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:5 S.stipitis:198

G3JR12              	100.00%		A3M0G8              	100.00%
                    	       		A3M0Q3              	55.16%
Bootstrap support for G3JR12 as seed ortholog is 46%.
Alternative seed ortholog is G3JSV7 (5 bits away from this cluster)
Bootstrap support for A3M0G8 as seed ortholog is 99%.

Group of orthologs #1399. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3J3A1              	100.00%		A3LMX0              	100.00%
Bootstrap support for G3J3A1 as seed ortholog is 100%.
Bootstrap support for A3LMX0 as seed ortholog is 100%.

Group of orthologs #1400. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:269

G3J821              	100.00%		A3GGN4              	100.00%
Bootstrap support for G3J821 as seed ortholog is 99%.
Bootstrap support for A3GGN4 as seed ortholog is 100%.

Group of orthologs #1401. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:269

G3JD37              	100.00%		A3GHV8              	100.00%
Bootstrap support for G3JD37 as seed ortholog is 100%.
Bootstrap support for A3GHV8 as seed ortholog is 100%.

Group of orthologs #1402. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3JNX3              	100.00%		A3GF04              	100.00%
Bootstrap support for G3JNX3 as seed ortholog is 100%.
Bootstrap support for A3GF04 as seed ortholog is 100%.

Group of orthologs #1403. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:269

G3JBT4              	100.00%		A3LYE5              	100.00%
Bootstrap support for G3JBT4 as seed ortholog is 97%.
Bootstrap support for A3LYE5 as seed ortholog is 100%.

Group of orthologs #1404. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3JHA7              	100.00%		A3LVM5              	100.00%
Bootstrap support for G3JHA7 as seed ortholog is 100%.
Bootstrap support for A3LVM5 as seed ortholog is 100%.

Group of orthologs #1405. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3JJ69              	100.00%		A3LVZ0              	100.00%
Bootstrap support for G3JJ69 as seed ortholog is 100%.
Bootstrap support for A3LVZ0 as seed ortholog is 100%.

Group of orthologs #1406. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3JS61              	100.00%		A3LNY2              	100.00%
Bootstrap support for G3JS61 as seed ortholog is 100%.
Bootstrap support for A3LNY2 as seed ortholog is 100%.

Group of orthologs #1407. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3JRD2              	100.00%		A3LYB1              	100.00%
Bootstrap support for G3JRD2 as seed ortholog is 100%.
Bootstrap support for A3LYB1 as seed ortholog is 100%.

Group of orthologs #1408. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 S.stipitis:269

G3JRJ0              	100.00%		A3LZE6              	100.00%
Bootstrap support for G3JRJ0 as seed ortholog is 100%.
Bootstrap support for A3LZE6 as seed ortholog is 100%.

Group of orthologs #1409. Best score 268 bits
Score difference with first non-orthologous sequence - C.militaris:268 S.stipitis:268

G3J439              	100.00%		A3LNC2              	100.00%
Bootstrap support for G3J439 as seed ortholog is 100%.
Bootstrap support for A3LNC2 as seed ortholog is 100%.

Group of orthologs #1410. Best score 268 bits
Score difference with first non-orthologous sequence - C.militaris:268 S.stipitis:268

G3J7K5              	100.00%		A3LUL4              	100.00%
Bootstrap support for G3J7K5 as seed ortholog is 100%.
Bootstrap support for A3LUL4 as seed ortholog is 100%.

Group of orthologs #1411. Best score 268 bits
Score difference with first non-orthologous sequence - C.militaris:268 S.stipitis:268

G3JHY4              	100.00%		A3GG94              	100.00%
Bootstrap support for G3JHY4 as seed ortholog is 100%.
Bootstrap support for A3GG94 as seed ortholog is 100%.

Group of orthologs #1412. Best score 268 bits
Score difference with first non-orthologous sequence - C.militaris:268 S.stipitis:268

G3JLT0              	100.00%		A3GH99              	100.00%
Bootstrap support for G3JLT0 as seed ortholog is 100%.
Bootstrap support for A3GH99 as seed ortholog is 100%.

Group of orthologs #1413. Best score 268 bits
Score difference with first non-orthologous sequence - C.militaris:268 S.stipitis:268

G3JLT2              	100.00%		A3LY31              	100.00%
Bootstrap support for G3JLT2 as seed ortholog is 100%.
Bootstrap support for A3LY31 as seed ortholog is 100%.

Group of orthologs #1414. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 S.stipitis:100

G3JBK4              	100.00%		A3GHN7              	100.00%
Bootstrap support for G3JBK4 as seed ortholog is 100%.
Bootstrap support for A3GHN7 as seed ortholog is 98%.

Group of orthologs #1415. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 S.stipitis:267

G3JND9              	100.00%		A3GGI1              	100.00%
Bootstrap support for G3JND9 as seed ortholog is 100%.
Bootstrap support for A3GGI1 as seed ortholog is 100%.

Group of orthologs #1416. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 S.stipitis:267

G3JL93              	100.00%		A3LUU3              	100.00%
Bootstrap support for G3JL93 as seed ortholog is 100%.
Bootstrap support for A3LUU3 as seed ortholog is 100%.

Group of orthologs #1417. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:172

G3JJB4              	100.00%		A3LY45              	100.00%
Bootstrap support for G3JJB4 as seed ortholog is 100%.
Bootstrap support for A3LY45 as seed ortholog is 100%.

Group of orthologs #1418. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 S.stipitis:267

G3JMW7              	100.00%		A3LWP8              	100.00%
Bootstrap support for G3JMW7 as seed ortholog is 100%.
Bootstrap support for A3LWP8 as seed ortholog is 100%.

Group of orthologs #1419. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 S.stipitis:161

G3JKB6              	100.00%		A3M0B5              	100.00%
Bootstrap support for G3JKB6 as seed ortholog is 100%.
Bootstrap support for A3M0B5 as seed ortholog is 100%.

Group of orthologs #1420. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:46 S.stipitis:266

G3JNE8              	100.00%		A3GHE3              	100.00%
G3JFM1              	13.95%		
G3JUV6              	13.30%		
G3J8I8              	5.51%		
Bootstrap support for G3JNE8 as seed ortholog is 86%.
Bootstrap support for A3GHE3 as seed ortholog is 100%.

Group of orthologs #1421. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:92

G3J5P3              	100.00%		A3GGW1              	100.00%
Bootstrap support for G3J5P3 as seed ortholog is 100%.
Bootstrap support for A3GGW1 as seed ortholog is 99%.

Group of orthologs #1422. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3J8G9              	100.00%		A3GFR5              	100.00%
Bootstrap support for G3J8G9 as seed ortholog is 100%.
Bootstrap support for A3GFR5 as seed ortholog is 100%.

Group of orthologs #1423. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:266

G3J8G0              	100.00%		A3GGU8              	100.00%
Bootstrap support for G3J8G0 as seed ortholog is 100%.
Bootstrap support for A3GGU8 as seed ortholog is 100%.

Group of orthologs #1424. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3JAV2              	100.00%		A3GF34              	100.00%
Bootstrap support for G3JAV2 as seed ortholog is 100%.
Bootstrap support for A3GF34 as seed ortholog is 100%.

Group of orthologs #1425. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3J5S7              	100.00%		A3LPP9              	100.00%
Bootstrap support for G3J5S7 as seed ortholog is 100%.
Bootstrap support for A3LPP9 as seed ortholog is 100%.

Group of orthologs #1426. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:104

G3JAC3              	100.00%		A3LNF3              	100.00%
Bootstrap support for G3JAC3 as seed ortholog is 100%.
Bootstrap support for A3LNF3 as seed ortholog is 99%.

Group of orthologs #1427. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:266

G3JD97              	100.00%		A3LVF9              	100.00%
Bootstrap support for G3JD97 as seed ortholog is 100%.
Bootstrap support for A3LVF9 as seed ortholog is 100%.

Group of orthologs #1428. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3JMI3              	100.00%		A3LNN8              	100.00%
Bootstrap support for G3JMI3 as seed ortholog is 100%.
Bootstrap support for A3LNN8 as seed ortholog is 100%.

Group of orthologs #1429. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3JDI4              	100.00%		A3LZB4              	100.00%
Bootstrap support for G3JDI4 as seed ortholog is 100%.
Bootstrap support for A3LZB4 as seed ortholog is 100%.

Group of orthologs #1430. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3JPZ1              	100.00%		A3LXP9              	100.00%
Bootstrap support for G3JPZ1 as seed ortholog is 100%.
Bootstrap support for A3LXP9 as seed ortholog is 100%.

Group of orthologs #1431. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 S.stipitis:266

G3JR02              	100.00%		A3LYE8              	100.00%
Bootstrap support for G3JR02 as seed ortholog is 100%.
Bootstrap support for A3LYE8 as seed ortholog is 100%.

Group of orthologs #1432. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:265

G3JJ35              	100.00%		A3LV21              	100.00%
G3JE87              	5.40%		A3LU73              	32.21%
                    	       		A3LRD8              	27.61%
                    	       		A3LV20              	24.13%
                    	       		A3LXG2              	9.45%
                    	       		A3GGH1              	8.96%
                    	       		A3LVX6              	5.85%
Bootstrap support for G3JJ35 as seed ortholog is 96%.
Bootstrap support for A3LV21 as seed ortholog is 100%.

Group of orthologs #1433. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:154

G3JAU0              	100.00%		A3LT96              	100.00%
G3JRS3              	9.38%		
Bootstrap support for G3JAU0 as seed ortholog is 99%.
Bootstrap support for A3LT96 as seed ortholog is 99%.

Group of orthologs #1434. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 S.stipitis:265

G3J8S8              	100.00%		A3LQF3              	100.00%
Bootstrap support for G3J8S8 as seed ortholog is 100%.
Bootstrap support for A3LQF3 as seed ortholog is 100%.

Group of orthologs #1435. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 S.stipitis:265

G3J4I6              	100.00%		A3LXF4              	100.00%
Bootstrap support for G3J4I6 as seed ortholog is 100%.
Bootstrap support for A3LXF4 as seed ortholog is 100%.

Group of orthologs #1436. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 S.stipitis:265

G3JL25              	100.00%		A3GGN3              	100.00%
Bootstrap support for G3JL25 as seed ortholog is 100%.
Bootstrap support for A3GGN3 as seed ortholog is 100%.

Group of orthologs #1437. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 S.stipitis:265

G3JNB5              	100.00%		A3GGW7              	100.00%
Bootstrap support for G3JNB5 as seed ortholog is 100%.
Bootstrap support for A3GGW7 as seed ortholog is 100%.

Group of orthologs #1438. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:164

G3JNA8              	100.00%		A3LXX3              	100.00%
Bootstrap support for G3JNA8 as seed ortholog is 99%.
Bootstrap support for A3LXX3 as seed ortholog is 100%.

Group of orthologs #1439. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 S.stipitis:265

G3JU64              	100.00%		A3LTQ4              	100.00%
Bootstrap support for G3JU64 as seed ortholog is 100%.
Bootstrap support for A3LTQ4 as seed ortholog is 100%.

Group of orthologs #1440. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:264

G3J6D0              	100.00%		A3LX09              	100.00%
Bootstrap support for G3J6D0 as seed ortholog is 100%.
Bootstrap support for A3LX09 as seed ortholog is 100%.

Group of orthologs #1441. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:264

G3JLL4              	100.00%		A3GG37              	100.00%
Bootstrap support for G3JLL4 as seed ortholog is 100%.
Bootstrap support for A3GG37 as seed ortholog is 100%.

Group of orthologs #1442. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:264

G3JLS4              	100.00%		A3LPF7              	100.00%
Bootstrap support for G3JLS4 as seed ortholog is 100%.
Bootstrap support for A3LPF7 as seed ortholog is 100%.

Group of orthologs #1443. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:264

G3JEN0              	100.00%		A3LX17              	100.00%
Bootstrap support for G3JEN0 as seed ortholog is 100%.
Bootstrap support for A3LX17 as seed ortholog is 100%.

Group of orthologs #1444. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 S.stipitis:264

G3JL86              	100.00%		A3LW27              	100.00%
Bootstrap support for G3JL86 as seed ortholog is 100%.
Bootstrap support for A3LW27 as seed ortholog is 100%.

Group of orthologs #1445. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:263 S.stipitis:263

G3J2S7              	100.00%		A3LTK4              	100.00%
Bootstrap support for G3J2S7 as seed ortholog is 100%.
Bootstrap support for A3LTK4 as seed ortholog is 100%.

Group of orthologs #1446. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:263 S.stipitis:263

G3J3F7              	100.00%		A3LVM4              	100.00%
Bootstrap support for G3J3F7 as seed ortholog is 100%.
Bootstrap support for A3LVM4 as seed ortholog is 100%.

Group of orthologs #1447. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:263

G3JIP3              	100.00%		A3LV83              	100.00%
Bootstrap support for G3JIP3 as seed ortholog is 100%.
Bootstrap support for A3LV83 as seed ortholog is 100%.

Group of orthologs #1448. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:263 S.stipitis:263

G3JPX2              	100.00%		A3LQK6              	100.00%
Bootstrap support for G3JPX2 as seed ortholog is 100%.
Bootstrap support for A3LQK6 as seed ortholog is 100%.

Group of orthologs #1449. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:263 S.stipitis:263

G3JNX8              	100.00%		A3LYB5              	100.00%
Bootstrap support for G3JNX8 as seed ortholog is 100%.
Bootstrap support for A3LYB5 as seed ortholog is 100%.

Group of orthologs #1450. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 S.stipitis:262

G3J9X9              	100.00%		A3LX55              	100.00%
G3JH08              	27.72%		
G3JCD1              	15.35%		
Bootstrap support for G3J9X9 as seed ortholog is 100%.
Bootstrap support for A3LX55 as seed ortholog is 100%.

Group of orthologs #1451. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 S.stipitis:262

G3J665              	100.00%		A3LUN3              	100.00%
Bootstrap support for G3J665 as seed ortholog is 100%.
Bootstrap support for A3LUN3 as seed ortholog is 100%.

Group of orthologs #1452. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:32

G3J4F2              	100.00%		A3LWZ7              	100.00%
Bootstrap support for G3J4F2 as seed ortholog is 100%.
Bootstrap support for A3LWZ7 as seed ortholog is 80%.

Group of orthologs #1453. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:177 S.stipitis:190

G3JNF1              	100.00%		A3GHL8              	100.00%
Bootstrap support for G3JNF1 as seed ortholog is 100%.
Bootstrap support for A3GHL8 as seed ortholog is 100%.

Group of orthologs #1454. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:262

G3JB55              	100.00%		A3LZN7              	100.00%
Bootstrap support for G3JB55 as seed ortholog is 99%.
Bootstrap support for A3LZN7 as seed ortholog is 100%.

Group of orthologs #1455. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 S.stipitis:262

G3JCW0              	100.00%		A3LYP5              	100.00%
Bootstrap support for G3JCW0 as seed ortholog is 100%.
Bootstrap support for A3LYP5 as seed ortholog is 100%.

Group of orthologs #1456. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:113

G3JK03              	100.00%		A3LT66              	100.00%
Bootstrap support for G3JK03 as seed ortholog is 98%.
Bootstrap support for A3LT66 as seed ortholog is 99%.

Group of orthologs #1457. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:171

G3JLK2              	100.00%		A3LU85              	100.00%
Bootstrap support for G3JLK2 as seed ortholog is 99%.
Bootstrap support for A3LU85 as seed ortholog is 100%.

Group of orthologs #1458. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 S.stipitis:12

G3JMT6              	100.00%		A3LV73              	100.00%
Bootstrap support for G3JMT6 as seed ortholog is 100%.
Bootstrap support for A3LV73 as seed ortholog is 64%.
Alternative seed ortholog is A3LV64 (12 bits away from this cluster)

Group of orthologs #1459. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:163

G3JQJ4              	100.00%		A3LTR3              	100.00%
Bootstrap support for G3JQJ4 as seed ortholog is 100%.
Bootstrap support for A3LTR3 as seed ortholog is 100%.

Group of orthologs #1460. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:137 S.stipitis:168

G3JK72              	100.00%		A3LZU7              	100.00%
Bootstrap support for G3JK72 as seed ortholog is 99%.
Bootstrap support for A3LZU7 as seed ortholog is 100%.

Group of orthologs #1461. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 S.stipitis:262

G3JMN2              	100.00%		A3LXR4              	100.00%
Bootstrap support for G3JMN2 as seed ortholog is 100%.
Bootstrap support for A3LXR4 as seed ortholog is 100%.

Group of orthologs #1462. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:261

G3J4A9              	100.00%		A3LTF6              	100.00%
G3JPW8              	24.26%		
Bootstrap support for G3J4A9 as seed ortholog is 99%.
Bootstrap support for A3LTF6 as seed ortholog is 100%.

Group of orthologs #1463. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 S.stipitis:261

G3JFU6              	100.00%		A3LND3              	100.00%
Bootstrap support for G3JFU6 as seed ortholog is 100%.
Bootstrap support for A3LND3 as seed ortholog is 100%.

Group of orthologs #1464. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 S.stipitis:261

G3JL89              	100.00%		A3GG44              	100.00%
Bootstrap support for G3JL89 as seed ortholog is 100%.
Bootstrap support for A3GG44 as seed ortholog is 100%.

Group of orthologs #1465. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JT39              	100.00%		A3LRU0              	100.00%
Bootstrap support for G3JT39 as seed ortholog is 80%.
Bootstrap support for A3LRU0 as seed ortholog is 86%.

Group of orthologs #1466. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 S.stipitis:261

G3JQH1              	100.00%		A3LVN6              	100.00%
Bootstrap support for G3JQH1 as seed ortholog is 100%.
Bootstrap support for A3LVN6 as seed ortholog is 100%.

Group of orthologs #1467. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:260

G3J4L3              	100.00%		A3LR59              	100.00%
Bootstrap support for G3J4L3 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #1468. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:260

G3J351              	100.00%		A3LZT4              	100.00%
Bootstrap support for G3J351 as seed ortholog is 100%.
Bootstrap support for A3LZT4 as seed ortholog is 100%.

Group of orthologs #1469. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:260

G3JAU6              	100.00%		A3LVS7              	100.00%
Bootstrap support for G3JAU6 as seed ortholog is 100%.
Bootstrap support for A3LVS7 as seed ortholog is 100%.

Group of orthologs #1470. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:260

G3JPT7              	100.00%		A3GFJ9              	100.00%
Bootstrap support for G3JPT7 as seed ortholog is 100%.
Bootstrap support for A3GFJ9 as seed ortholog is 100%.

Group of orthologs #1471. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:260

G3JU70              	100.00%		A3GG87              	100.00%
Bootstrap support for G3JU70 as seed ortholog is 100%.
Bootstrap support for A3GG87 as seed ortholog is 100%.

Group of orthologs #1472. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 S.stipitis:260

G3JPP1              	100.00%		A3LQU3              	100.00%
Bootstrap support for G3JPP1 as seed ortholog is 100%.
Bootstrap support for A3LQU3 as seed ortholog is 100%.

Group of orthologs #1473. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 S.stipitis:259

G3J4S1              	100.00%		A3LNR7              	100.00%
Bootstrap support for G3J4S1 as seed ortholog is 100%.
Bootstrap support for A3LNR7 as seed ortholog is 100%.

Group of orthologs #1474. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 S.stipitis:259

G3J5E8              	100.00%		A3LYI0              	100.00%
Bootstrap support for G3J5E8 as seed ortholog is 100%.
Bootstrap support for A3LYI0 as seed ortholog is 100%.

Group of orthologs #1475. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:192

G3JL02              	100.00%		A3M0K7              	100.00%
Bootstrap support for G3JL02 as seed ortholog is 99%.
Bootstrap support for A3M0K7 as seed ortholog is 100%.

Group of orthologs #1476. Best score 258 bits
Score difference with first non-orthologous sequence - C.militaris:258 S.stipitis:258

G3J8U6              	100.00%		A3LSM6              	100.00%
Bootstrap support for G3J8U6 as seed ortholog is 100%.
Bootstrap support for A3LSM6 as seed ortholog is 100%.

Group of orthologs #1477. Best score 258 bits
Score difference with first non-orthologous sequence - C.militaris:258 S.stipitis:258

G3JH89              	100.00%		A3GEZ9              	100.00%
Bootstrap support for G3JH89 as seed ortholog is 100%.
Bootstrap support for A3GEZ9 as seed ortholog is 100%.

Group of orthologs #1478. Best score 258 bits
Score difference with first non-orthologous sequence - C.militaris:258 S.stipitis:258

G3J7F1              	100.00%		A3LUT6              	100.00%
Bootstrap support for G3J7F1 as seed ortholog is 100%.
Bootstrap support for A3LUT6 as seed ortholog is 100%.

Group of orthologs #1479. Best score 258 bits
Score difference with first non-orthologous sequence - C.militaris:258 S.stipitis:258

G3JHT3              	100.00%		A3GFD6              	100.00%
Bootstrap support for G3JHT3 as seed ortholog is 100%.
Bootstrap support for A3GFD6 as seed ortholog is 100%.

Group of orthologs #1480. Best score 258 bits
Score difference with first non-orthologous sequence - C.militaris:31 S.stipitis:4

G3JEA8              	100.00%		A3LS31              	100.00%
Bootstrap support for G3JEA8 as seed ortholog is 74%.
Alternative seed ortholog is G3J3G4 (31 bits away from this cluster)
Bootstrap support for A3LS31 as seed ortholog is 51%.
Alternative seed ortholog is A3LU15 (4 bits away from this cluster)

Group of orthologs #1481. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:257

G3JDK8              	100.00%		A3LUV9              	100.00%
G3J9R9              	5.25%		
Bootstrap support for G3JDK8 as seed ortholog is 99%.
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #1482. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 S.stipitis:183

G3J488              	100.00%		A3LVR6              	100.00%
Bootstrap support for G3J488 as seed ortholog is 100%.
Bootstrap support for A3LVR6 as seed ortholog is 100%.

Group of orthologs #1483. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 S.stipitis:257

G3JDZ5              	100.00%		A3LSK0              	100.00%
Bootstrap support for G3JDZ5 as seed ortholog is 100%.
Bootstrap support for A3LSK0 as seed ortholog is 100%.

Group of orthologs #1484. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:162

G3JJN8              	100.00%		A3GHW9              	100.00%
Bootstrap support for G3JJN8 as seed ortholog is 96%.
Bootstrap support for A3GHW9 as seed ortholog is 99%.

Group of orthologs #1485. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:257

G3JUC4              	100.00%		A3LRS9              	100.00%
Bootstrap support for G3JUC4 as seed ortholog is 99%.
Bootstrap support for A3LRS9 as seed ortholog is 100%.

Group of orthologs #1486. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:7

G3JSG8              	100.00%		A3LRG9              	100.00%
G3JDR7              	12.98%		
Bootstrap support for G3JSG8 as seed ortholog is 99%.
Bootstrap support for A3LRG9 as seed ortholog is 56%.
Alternative seed ortholog is A3LND8 (7 bits away from this cluster)

Group of orthologs #1487. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:256 S.stipitis:256

G3J7F9              	100.00%		A3GGW9              	100.00%
Bootstrap support for G3J7F9 as seed ortholog is 100%.
Bootstrap support for A3GGW9 as seed ortholog is 100%.

Group of orthologs #1488. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:121

G3JM99              	100.00%		A3LTW9              	100.00%
Bootstrap support for G3JM99 as seed ortholog is 100%.
Bootstrap support for A3LTW9 as seed ortholog is 99%.

Group of orthologs #1489. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:256 S.stipitis:256

G3JUA5              	100.00%		A3LN87              	100.00%
Bootstrap support for G3JUA5 as seed ortholog is 100%.
Bootstrap support for A3LN87 as seed ortholog is 100%.

Group of orthologs #1490. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:111

G3JQ25              	100.00%		A3LZ12              	100.00%
Bootstrap support for G3JQ25 as seed ortholog is 100%.
Bootstrap support for A3LZ12 as seed ortholog is 99%.

Group of orthologs #1491. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:255

G3JI98              	100.00%		A3M051              	100.00%
                    	       		A3LTQ9              	20.92%
                    	       		A3M050              	10.46%
                    	       		A3LTQ8              	5.88%
Bootstrap support for G3JI98 as seed ortholog is 100%.
Bootstrap support for A3M051 as seed ortholog is 100%.

Group of orthologs #1492. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:118

G3JPU6              	100.00%		A3LXD5              	100.00%
                    	       		A3GHN6              	12.50%
Bootstrap support for G3JPU6 as seed ortholog is 100%.
Bootstrap support for A3LXD5 as seed ortholog is 100%.

Group of orthologs #1493. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:162

G3J4N5              	100.00%		A3GGX4              	100.00%
Bootstrap support for G3J4N5 as seed ortholog is 100%.
Bootstrap support for A3GGX4 as seed ortholog is 100%.

Group of orthologs #1494. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:255

G3JDL5              	100.00%		A3GFD5              	100.00%
Bootstrap support for G3JDL5 as seed ortholog is 100%.
Bootstrap support for A3GFD5 as seed ortholog is 100%.

Group of orthologs #1495. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:255

G3JL01              	100.00%		A3GI05              	100.00%
Bootstrap support for G3JL01 as seed ortholog is 100%.
Bootstrap support for A3GI05 as seed ortholog is 100%.

Group of orthologs #1496. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:255

G3JQI7              	100.00%		A3LNL2              	100.00%
Bootstrap support for G3JQI7 as seed ortholog is 100%.
Bootstrap support for A3LNL2 as seed ortholog is 100%.

Group of orthologs #1497. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:255

G3JLP6              	100.00%		A3LUQ4              	100.00%
Bootstrap support for G3JLP6 as seed ortholog is 100%.
Bootstrap support for A3LUQ4 as seed ortholog is 100%.

Group of orthologs #1498. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 S.stipitis:255

G3JMB8              	100.00%		A3LU96              	100.00%
Bootstrap support for G3JMB8 as seed ortholog is 100%.
Bootstrap support for A3LU96 as seed ortholog is 100%.

Group of orthologs #1499. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:254 S.stipitis:254

G3J3F9              	100.00%		A3LNH9              	100.00%
Bootstrap support for G3J3F9 as seed ortholog is 100%.
Bootstrap support for A3LNH9 as seed ortholog is 100%.

Group of orthologs #1500. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:254 S.stipitis:254

G3J9X8              	100.00%		A3LTA7              	100.00%
Bootstrap support for G3J9X8 as seed ortholog is 100%.
Bootstrap support for A3LTA7 as seed ortholog is 100%.

Group of orthologs #1501. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:254 S.stipitis:159

G3JR20              	100.00%		A3LVK9              	100.00%
Bootstrap support for G3JR20 as seed ortholog is 100%.
Bootstrap support for A3LVK9 as seed ortholog is 99%.

Group of orthologs #1502. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:10 S.stipitis:253

G3JDF8              	100.00%		A3GGK1              	100.00%
G3JCM8              	34.82%		
G3JFZ9              	18.02%		
Bootstrap support for G3JDF8 as seed ortholog is 76%.
Bootstrap support for A3GGK1 as seed ortholog is 100%.

Group of orthologs #1503. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 S.stipitis:253

G3J516              	100.00%		A3GF99              	100.00%
Bootstrap support for G3J516 as seed ortholog is 100%.
Bootstrap support for A3GF99 as seed ortholog is 100%.

Group of orthologs #1504. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 S.stipitis:253

G3JEB7              	100.00%		A3LR22              	100.00%
Bootstrap support for G3JEB7 as seed ortholog is 100%.
Bootstrap support for A3LR22 as seed ortholog is 100%.

Group of orthologs #1505. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 S.stipitis:253

G3JMP3              	100.00%		A3LN71              	100.00%
Bootstrap support for G3JMP3 as seed ortholog is 100%.
Bootstrap support for A3LN71 as seed ortholog is 100%.

Group of orthologs #1506. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 S.stipitis:253

G3JJF2              	100.00%		A3LTD6              	100.00%
Bootstrap support for G3JJF2 as seed ortholog is 100%.
Bootstrap support for A3LTD6 as seed ortholog is 100%.

Group of orthologs #1507. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:253

G3JG84              	100.00%		A3M0N1              	100.00%
Bootstrap support for G3JG84 as seed ortholog is 94%.
Bootstrap support for A3M0N1 as seed ortholog is 100%.

Group of orthologs #1508. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 S.stipitis:253

G3JN40              	100.00%		A3LTT7              	100.00%
Bootstrap support for G3JN40 as seed ortholog is 100%.
Bootstrap support for A3LTT7 as seed ortholog is 100%.

Group of orthologs #1509. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:162

G3JM32              	100.00%		A3LV89              	100.00%
Bootstrap support for G3JM32 as seed ortholog is 100%.
Bootstrap support for A3LV89 as seed ortholog is 100%.

Group of orthologs #1510. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:153

G3JKP5              	100.00%		A3LXB2              	100.00%
Bootstrap support for G3JKP5 as seed ortholog is 99%.
Bootstrap support for A3LXB2 as seed ortholog is 99%.

Group of orthologs #1511. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 S.stipitis:253

G3JRG9              	100.00%		A3LV46              	100.00%
Bootstrap support for G3JRG9 as seed ortholog is 100%.
Bootstrap support for A3LV46 as seed ortholog is 100%.

Group of orthologs #1512. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 S.stipitis:41

G3JCQ5              	100.00%		A3GH73              	100.00%
Bootstrap support for G3JCQ5 as seed ortholog is 100%.
Bootstrap support for A3GH73 as seed ortholog is 80%.

Group of orthologs #1513. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 S.stipitis:252

G3JIA9              	100.00%		A3LNF8              	100.00%
Bootstrap support for G3JIA9 as seed ortholog is 100%.
Bootstrap support for A3LNF8 as seed ortholog is 100%.

Group of orthologs #1514. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 S.stipitis:252

G3JG23              	100.00%		A3LUQ3              	100.00%
Bootstrap support for G3JG23 as seed ortholog is 100%.
Bootstrap support for A3LUQ3 as seed ortholog is 100%.

Group of orthologs #1515. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 S.stipitis:252

G3JKY9              	100.00%		A3LXC2              	100.00%
Bootstrap support for G3JKY9 as seed ortholog is 100%.
Bootstrap support for A3LXC2 as seed ortholog is 100%.

Group of orthologs #1516. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 S.stipitis:252

G3JJH2              	100.00%		A3M0L4              	100.00%
Bootstrap support for G3JJH2 as seed ortholog is 100%.
Bootstrap support for A3M0L4 as seed ortholog is 100%.

Group of orthologs #1517. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 S.stipitis:252

G3JQ26              	100.00%		A3LZV2              	100.00%
Bootstrap support for G3JQ26 as seed ortholog is 100%.
Bootstrap support for A3LZV2 as seed ortholog is 100%.

Group of orthologs #1518. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:251

G3J9J2              	100.00%		A3LNL8              	100.00%
                    	       		A3LYQ6              	67.10%
                    	       		A3LXF8              	38.73%
Bootstrap support for G3J9J2 as seed ortholog is 99%.
Bootstrap support for A3LNL8 as seed ortholog is 100%.

Group of orthologs #1519. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:251

G3J7T3              	100.00%		A3GFV6              	100.00%
Bootstrap support for G3J7T3 as seed ortholog is 100%.
Bootstrap support for A3GFV6 as seed ortholog is 100%.

Group of orthologs #1520. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:251

G3JC61              	100.00%		A3GFM2              	100.00%
Bootstrap support for G3JC61 as seed ortholog is 100%.
Bootstrap support for A3GFM2 as seed ortholog is 100%.

Group of orthologs #1521. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:199

G3JCX0              	100.00%		A3LQL8              	100.00%
Bootstrap support for G3JCX0 as seed ortholog is 100%.
Bootstrap support for A3LQL8 as seed ortholog is 100%.

Group of orthologs #1522. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:251

G3J6Q9              	100.00%		A3M0L5              	100.00%
Bootstrap support for G3J6Q9 as seed ortholog is 100%.
Bootstrap support for A3M0L5 as seed ortholog is 100%.

Group of orthologs #1523. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:251

G3JFA0              	100.00%		A3LZD3              	100.00%
Bootstrap support for G3JFA0 as seed ortholog is 100%.
Bootstrap support for A3LZD3 as seed ortholog is 100%.

Group of orthologs #1524. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 S.stipitis:251

G3JNX0              	100.00%		A3LYR3              	100.00%
Bootstrap support for G3JNX0 as seed ortholog is 100%.
Bootstrap support for A3LYR3 as seed ortholog is 100%.

Group of orthologs #1525. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:112

G3J6B2              	100.00%		A3LT05              	100.00%
                    	       		A3LT06              	63.82%
                    	       		A3LU62              	54.96%
                    	       		A3LSQ9              	24.27%
Bootstrap support for G3J6B2 as seed ortholog is 100%.
Bootstrap support for A3LT05 as seed ortholog is 99%.

Group of orthologs #1526. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:250

G3JIF7              	100.00%		A3LPX2              	100.00%
G3J4M8              	29.33%		
Bootstrap support for G3JIF7 as seed ortholog is 100%.
Bootstrap support for A3LPX2 as seed ortholog is 100%.

Group of orthologs #1527. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:250

G3JT84              	100.00%		A3LSP6              	100.00%
                    	       		A3LPN1              	85.28%
Bootstrap support for G3JT84 as seed ortholog is 86%.
Bootstrap support for A3LSP6 as seed ortholog is 100%.

Group of orthologs #1528. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:250

G3J3R6              	100.00%		A3LQA2              	100.00%
Bootstrap support for G3J3R6 as seed ortholog is 100%.
Bootstrap support for A3LQA2 as seed ortholog is 100%.

Group of orthologs #1529. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:250

G3JCS9              	100.00%		A3GIE0              	100.00%
Bootstrap support for G3JCS9 as seed ortholog is 100%.
Bootstrap support for A3GIE0 as seed ortholog is 100%.

Group of orthologs #1530. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:194 S.stipitis:180

G3JH33              	100.00%		A3GG69              	100.00%
Bootstrap support for G3JH33 as seed ortholog is 100%.
Bootstrap support for A3GG69 as seed ortholog is 100%.

Group of orthologs #1531. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:250

G3J8N0              	100.00%		A3LUZ2              	100.00%
Bootstrap support for G3J8N0 as seed ortholog is 100%.
Bootstrap support for A3LUZ2 as seed ortholog is 100%.

Group of orthologs #1532. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:250

G3JDT2              	100.00%		A3LR74              	100.00%
Bootstrap support for G3JDT2 as seed ortholog is 100%.
Bootstrap support for A3LR74 as seed ortholog is 100%.

Group of orthologs #1533. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:181

G3JH96              	100.00%		A3LQK5              	100.00%
Bootstrap support for G3JH96 as seed ortholog is 99%.
Bootstrap support for A3LQK5 as seed ortholog is 100%.

Group of orthologs #1534. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 S.stipitis:250

G3JPT9              	100.00%		A3LWJ4              	100.00%
Bootstrap support for G3JPT9 as seed ortholog is 100%.
Bootstrap support for A3LWJ4 as seed ortholog is 100%.

Group of orthologs #1535. Best score 249 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:68

G3JJQ2              	100.00%		A3LSP9              	100.00%
G3JM07              	22.35%		A3LUP8              	75.32%
Bootstrap support for G3JJQ2 as seed ortholog is 98%.
Bootstrap support for A3LSP9 as seed ortholog is 95%.

Group of orthologs #1536. Best score 249 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:146

G3J6D6              	100.00%		A3LPN5              	100.00%
                    	       		A3LSP3              	77.31%
Bootstrap support for G3J6D6 as seed ortholog is 99%.
Bootstrap support for A3LPN5 as seed ortholog is 99%.

Group of orthologs #1537. Best score 249 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:148

G3J6A6              	100.00%		A3LUE6              	100.00%
                    	       		A3LXZ8              	49.80%
Bootstrap support for G3J6A6 as seed ortholog is 99%.
Bootstrap support for A3LUE6 as seed ortholog is 100%.

Group of orthologs #1538. Best score 249 bits
Score difference with first non-orthologous sequence - C.militaris:46 S.stipitis:88

G3JB36              	100.00%		A3GGL4              	100.00%
Bootstrap support for G3JB36 as seed ortholog is 97%.
Bootstrap support for A3GGL4 as seed ortholog is 99%.

Group of orthologs #1539. Best score 249 bits
Score difference with first non-orthologous sequence - C.militaris:249 S.stipitis:249

G3J5D8              	100.00%		A3LUC4              	100.00%
Bootstrap support for G3J5D8 as seed ortholog is 100%.
Bootstrap support for A3LUC4 as seed ortholog is 100%.

Group of orthologs #1540. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:248

G3JRB2              	100.00%		A3LZV0              	100.00%
G3J706              	16.02%		
Bootstrap support for G3JRB2 as seed ortholog is 99%.
Bootstrap support for A3LZV0 as seed ortholog is 100%.

Group of orthologs #1541. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 S.stipitis:248

G3JFK2              	100.00%		A3LY47              	100.00%
Bootstrap support for G3JFK2 as seed ortholog is 100%.
Bootstrap support for A3LY47 as seed ortholog is 100%.

Group of orthologs #1542. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 S.stipitis:142

G3JQT1              	100.00%		A3LPV6              	100.00%
Bootstrap support for G3JQT1 as seed ortholog is 100%.
Bootstrap support for A3LPV6 as seed ortholog is 99%.

Group of orthologs #1543. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:247 S.stipitis:178

G3JGG6              	100.00%		A3LV63              	100.00%
G3J656              	8.20%		A3LXL6              	100.00%
Bootstrap support for G3JGG6 as seed ortholog is 100%.
Bootstrap support for A3LV63 as seed ortholog is 99%.
Bootstrap support for A3LXL6 as seed ortholog is 99%.

Group of orthologs #1544. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:247

G3JRS4              	100.00%		A3GFH2              	100.00%
                    	       		A3M0N6              	26.36%
Bootstrap support for G3JRS4 as seed ortholog is 98%.
Bootstrap support for A3GFH2 as seed ortholog is 100%.

Group of orthologs #1545. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:247 S.stipitis:247

G3JQ58              	100.00%		A3LSJ8              	100.00%
Bootstrap support for G3JQ58 as seed ortholog is 100%.
Bootstrap support for A3LSJ8 as seed ortholog is 100%.

Group of orthologs #1546. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:152 S.stipitis:91

G3J4D8              	100.00%		A3GHJ2              	100.00%
Bootstrap support for G3J4D8 as seed ortholog is 100%.
Bootstrap support for A3GHJ2 as seed ortholog is 98%.

Group of orthologs #1547. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 S.stipitis:246

G3JAU3              	100.00%		A3LT92              	100.00%
Bootstrap support for G3JAU3 as seed ortholog is 100%.
Bootstrap support for A3LT92 as seed ortholog is 100%.

Group of orthologs #1548. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 S.stipitis:246

G3JAJ5              	100.00%		A3LTL4              	100.00%
Bootstrap support for G3JAJ5 as seed ortholog is 100%.
Bootstrap support for A3LTL4 as seed ortholog is 100%.

Group of orthologs #1549. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 S.stipitis:246

G3JJY4              	100.00%		A3LQ24              	100.00%
Bootstrap support for G3JJY4 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #1550. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3J3J8              	100.00%		A3LW55              	100.00%
                    	       		A3LR99              	5.47%
Bootstrap support for G3J3J8 as seed ortholog is 100%.
Bootstrap support for A3LW55 as seed ortholog is 100%.

Group of orthologs #1551. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3J6W5              	100.00%		A3GHJ9              	100.00%
Bootstrap support for G3J6W5 as seed ortholog is 100%.
Bootstrap support for A3GHJ9 as seed ortholog is 100%.

Group of orthologs #1552. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3J9L7              	100.00%		A3GHM5              	100.00%
Bootstrap support for G3J9L7 as seed ortholog is 100%.
Bootstrap support for A3GHM5 as seed ortholog is 100%.

Group of orthologs #1553. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3J409              	100.00%		A3LX01              	100.00%
Bootstrap support for G3J409 as seed ortholog is 100%.
Bootstrap support for A3LX01 as seed ortholog is 100%.

Group of orthologs #1554. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3J773              	100.00%		A3LUW1              	100.00%
Bootstrap support for G3J773 as seed ortholog is 100%.
Bootstrap support for A3LUW1 as seed ortholog is 100%.

Group of orthologs #1555. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3J4G1              	100.00%		A3LZG6              	100.00%
Bootstrap support for G3J4G1 as seed ortholog is 100%.
Bootstrap support for A3LZG6 as seed ortholog is 100%.

Group of orthologs #1556. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3JLP0              	100.00%		A3LVA8              	100.00%
Bootstrap support for G3JLP0 as seed ortholog is 100%.
Bootstrap support for A3LVA8 as seed ortholog is 100%.

Group of orthologs #1557. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 S.stipitis:245

G3JUC2              	100.00%		A3LZE7              	100.00%
Bootstrap support for G3JUC2 as seed ortholog is 100%.
Bootstrap support for A3LZE7 as seed ortholog is 100%.

Group of orthologs #1558. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:142 S.stipitis:244

G3J4V9              	100.00%		A3LSF4              	100.00%
Bootstrap support for G3J4V9 as seed ortholog is 99%.
Bootstrap support for A3LSF4 as seed ortholog is 100%.

Group of orthologs #1559. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3J8A8              	100.00%		A3LP86              	100.00%
Bootstrap support for G3J8A8 as seed ortholog is 100%.
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #1560. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:178

G3JD51              	100.00%		A3GHI2              	100.00%
Bootstrap support for G3JD51 as seed ortholog is 99%.
Bootstrap support for A3GHI2 as seed ortholog is 100%.

Group of orthologs #1561. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3JH20              	100.00%		A3LRP5              	100.00%
Bootstrap support for G3JH20 as seed ortholog is 100%.
Bootstrap support for A3LRP5 as seed ortholog is 100%.

Group of orthologs #1562. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3JH99              	100.00%		A3LUC2              	100.00%
Bootstrap support for G3JH99 as seed ortholog is 100%.
Bootstrap support for A3LUC2 as seed ortholog is 100%.

Group of orthologs #1563. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3JKS3              	100.00%		A3LQZ2              	100.00%
Bootstrap support for G3JKS3 as seed ortholog is 100%.
Bootstrap support for A3LQZ2 as seed ortholog is 100%.

Group of orthologs #1564. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3JF56              	100.00%		A3LXQ8              	100.00%
Bootstrap support for G3JF56 as seed ortholog is 100%.
Bootstrap support for A3LXQ8 as seed ortholog is 100%.

Group of orthologs #1565. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3JR11              	100.00%		A3LP89              	100.00%
Bootstrap support for G3JR11 as seed ortholog is 100%.
Bootstrap support for A3LP89 as seed ortholog is 100%.

Group of orthologs #1566. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 S.stipitis:244

G3JRM0              	100.00%		A3LVA3              	100.00%
Bootstrap support for G3JRM0 as seed ortholog is 100%.
Bootstrap support for A3LVA3 as seed ortholog is 100%.

Group of orthologs #1567. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:24 S.stipitis:96

G3J8V0              	100.00%		A3LQL2              	100.00%
G3JDP9              	7.94%		A3M085              	22.62%
Bootstrap support for G3J8V0 as seed ortholog is 74%.
Alternative seed ortholog is G3JKC3 (24 bits away from this cluster)
Bootstrap support for A3LQL2 as seed ortholog is 98%.

Group of orthologs #1568. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:243

G3JGE5              	100.00%		A3LSB2              	100.00%
G3JA36              	6.14%		
Bootstrap support for G3JGE5 as seed ortholog is 100%.
Bootstrap support for A3LSB2 as seed ortholog is 100%.

Group of orthologs #1569. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:59

G3J679              	100.00%		A3LN50              	100.00%
Bootstrap support for G3J679 as seed ortholog is 100%.
Bootstrap support for A3LN50 as seed ortholog is 89%.

Group of orthologs #1570. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:243

G3J9I3              	100.00%		A3GFN5              	100.00%
Bootstrap support for G3J9I3 as seed ortholog is 100%.
Bootstrap support for A3GFN5 as seed ortholog is 100%.

Group of orthologs #1571. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:99

G3J8M1              	100.00%		A3LQ26              	100.00%
Bootstrap support for G3J8M1 as seed ortholog is 100%.
Bootstrap support for A3LQ26 as seed ortholog is 99%.

Group of orthologs #1572. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:120

G3JEK3              	100.00%		A3LTH0              	100.00%
Bootstrap support for G3JEK3 as seed ortholog is 99%.
Bootstrap support for A3LTH0 as seed ortholog is 99%.

Group of orthologs #1573. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:140

G3JJN5              	100.00%		A3LQS1              	100.00%
Bootstrap support for G3JJN5 as seed ortholog is 100%.
Bootstrap support for A3LQS1 as seed ortholog is 99%.

Group of orthologs #1574. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:243

G3JDY7              	100.00%		A3LWZ3              	100.00%
Bootstrap support for G3JDY7 as seed ortholog is 100%.
Bootstrap support for A3LWZ3 as seed ortholog is 100%.

Group of orthologs #1575. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:243

G3JGC1              	100.00%		A3LWM7              	100.00%
Bootstrap support for G3JGC1 as seed ortholog is 100%.
Bootstrap support for A3LWM7 as seed ortholog is 100%.

Group of orthologs #1576. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 S.stipitis:243

G3JRD7              	100.00%		A3LND0              	100.00%
Bootstrap support for G3JRD7 as seed ortholog is 100%.
Bootstrap support for A3LND0 as seed ortholog is 100%.

Group of orthologs #1577. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 S.stipitis:242

G3J6B9              	100.00%		A3GF55              	100.00%
Bootstrap support for G3J6B9 as seed ortholog is 100%.
Bootstrap support for A3GF55 as seed ortholog is 100%.

Group of orthologs #1578. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 S.stipitis:242

G3JF53              	100.00%		A3GF65              	100.00%
Bootstrap support for G3JF53 as seed ortholog is 100%.
Bootstrap support for A3GF65 as seed ortholog is 100%.

Group of orthologs #1579. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 S.stipitis:242

G3JDA2              	100.00%		A3GHB0              	100.00%
Bootstrap support for G3JDA2 as seed ortholog is 100%.
Bootstrap support for A3GHB0 as seed ortholog is 100%.

Group of orthologs #1580. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 S.stipitis:242

G3JIN6              	100.00%		A3LSV9              	100.00%
Bootstrap support for G3JIN6 as seed ortholog is 100%.
Bootstrap support for A3LSV9 as seed ortholog is 100%.

Group of orthologs #1581. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 S.stipitis:242

G3JRA7              	100.00%		A3LN05              	100.00%
Bootstrap support for G3JRA7 as seed ortholog is 100%.
Bootstrap support for A3LN05 as seed ortholog is 100%.

Group of orthologs #1582. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 S.stipitis:242

G3JLE6              	100.00%		A3LZL6              	100.00%
Bootstrap support for G3JLE6 as seed ortholog is 100%.
Bootstrap support for A3LZL6 as seed ortholog is 100%.

Group of orthologs #1583. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:80 S.stipitis:98

G3JBJ1              	100.00%		A3GF36              	100.00%
G3J752              	18.21%		
Bootstrap support for G3JBJ1 as seed ortholog is 94%.
Bootstrap support for A3GF36 as seed ortholog is 97%.

Group of orthologs #1584. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:241 S.stipitis:241

G3J2P3              	100.00%		A3GGB0              	100.00%
Bootstrap support for G3J2P3 as seed ortholog is 100%.
Bootstrap support for A3GGB0 as seed ortholog is 100%.

Group of orthologs #1585. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:241 S.stipitis:241

G3J3G6              	100.00%		A3LQV9              	100.00%
Bootstrap support for G3J3G6 as seed ortholog is 100%.
Bootstrap support for A3LQV9 as seed ortholog is 100%.

Group of orthologs #1586. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:241 S.stipitis:241

G3J932              	100.00%		A3LXB0              	100.00%
Bootstrap support for G3J932 as seed ortholog is 100%.
Bootstrap support for A3LXB0 as seed ortholog is 100%.

Group of orthologs #1587. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:168

G3JJE1              	100.00%		A3GIE9              	100.00%
Bootstrap support for G3JJE1 as seed ortholog is 99%.
Bootstrap support for A3GIE9 as seed ortholog is 100%.

Group of orthologs #1588. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:177 S.stipitis:172

G3JET8              	100.00%		A3LXQ4              	100.00%
Bootstrap support for G3JET8 as seed ortholog is 100%.
Bootstrap support for A3LXQ4 as seed ortholog is 100%.

Group of orthologs #1589. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:240

G3J321              	100.00%		A3GFM8              	100.00%
Bootstrap support for G3J321 as seed ortholog is 100%.
Bootstrap support for A3GFM8 as seed ortholog is 100%.

Group of orthologs #1590. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:240

G3J8F9              	100.00%		A3LP72              	100.00%
Bootstrap support for G3J8F9 as seed ortholog is 100%.
Bootstrap support for A3LP72 as seed ortholog is 100%.

Group of orthologs #1591. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:240

G3J914              	100.00%		A3LU67              	100.00%
Bootstrap support for G3J914 as seed ortholog is 100%.
Bootstrap support for A3LU67 as seed ortholog is 100%.

Group of orthologs #1592. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:240

G3JNV1              	100.00%		A3LMT2              	100.00%
Bootstrap support for G3JNV1 as seed ortholog is 100%.
Bootstrap support for A3LMT2 as seed ortholog is 100%.

Group of orthologs #1593. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 S.stipitis:240

G3JM36              	100.00%		A3LR76              	100.00%
Bootstrap support for G3JM36 as seed ortholog is 100%.
Bootstrap support for A3LR76 as seed ortholog is 100%.

Group of orthologs #1594. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:240

G3JSY4              	100.00%		A3GIF1              	100.00%
Bootstrap support for G3JSY4 as seed ortholog is 99%.
Bootstrap support for A3GIF1 as seed ortholog is 100%.

Group of orthologs #1595. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 S.stipitis:103

G3JPS9              	100.00%		A3GH19              	100.00%
G3J3I0              	19.08%		
Bootstrap support for G3JPS9 as seed ortholog is 100%.
Bootstrap support for A3GH19 as seed ortholog is 99%.

Group of orthologs #1596. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 S.stipitis:239

G3J988              	100.00%		A3M0G0              	100.00%
Bootstrap support for G3J988 as seed ortholog is 100%.
Bootstrap support for A3M0G0 as seed ortholog is 100%.

Group of orthologs #1597. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 S.stipitis:239

G3JHJ9              	100.00%		A3LTI0              	100.00%
Bootstrap support for G3JHJ9 as seed ortholog is 100%.
Bootstrap support for A3LTI0 as seed ortholog is 100%.

Group of orthologs #1598. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 S.stipitis:239

G3JHE1              	100.00%		A3LWF6              	100.00%
Bootstrap support for G3JHE1 as seed ortholog is 100%.
Bootstrap support for A3LWF6 as seed ortholog is 100%.

Group of orthologs #1599. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 S.stipitis:239

G3JR01              	100.00%		A3LZL4              	100.00%
Bootstrap support for G3JR01 as seed ortholog is 100%.
Bootstrap support for A3LZL4 as seed ortholog is 100%.

Group of orthologs #1600. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:238

G3J2T8              	100.00%		A3LV96              	100.00%
G3JIR1              	5.50%		
Bootstrap support for G3J2T8 as seed ortholog is 97%.
Bootstrap support for A3LV96 as seed ortholog is 100%.

Group of orthologs #1601. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:238

G3J4C5              	100.00%		A3LTE6              	100.00%
Bootstrap support for G3J4C5 as seed ortholog is 100%.
Bootstrap support for A3LTE6 as seed ortholog is 100%.

Group of orthologs #1602. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:238

G3J9I6              	100.00%		A3LUX9              	100.00%
Bootstrap support for G3J9I6 as seed ortholog is 100%.
Bootstrap support for A3LUX9 as seed ortholog is 100%.

Group of orthologs #1603. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:238

G3JG21              	100.00%		A3LQ21              	100.00%
Bootstrap support for G3JG21 as seed ortholog is 100%.
Bootstrap support for A3LQ21 as seed ortholog is 100%.

Group of orthologs #1604. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:238

G3J9G1              	100.00%		A3LXK5              	100.00%
Bootstrap support for G3J9G1 as seed ortholog is 100%.
Bootstrap support for A3LXK5 as seed ortholog is 100%.

Group of orthologs #1605. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:238

G3JLD2              	100.00%		A3LMS4              	100.00%
Bootstrap support for G3JLD2 as seed ortholog is 100%.
Bootstrap support for A3LMS4 as seed ortholog is 100%.

Group of orthologs #1606. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 S.stipitis:238

G3JQK8              	100.00%		A3LRR4              	100.00%
Bootstrap support for G3JQK8 as seed ortholog is 100%.
Bootstrap support for A3LRR4 as seed ortholog is 100%.

Group of orthologs #1607. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:14 S.stipitis:122

G3J6N5              	100.00%		A3LPG3              	100.00%
Bootstrap support for G3J6N5 as seed ortholog is 71%.
Alternative seed ortholog is G3J7K6 (14 bits away from this cluster)
Bootstrap support for A3LPG3 as seed ortholog is 100%.

Group of orthologs #1608. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3JE13              	100.00%		A3GH69              	100.00%
Bootstrap support for G3JE13 as seed ortholog is 100%.
Bootstrap support for A3GH69 as seed ortholog is 100%.

Group of orthologs #1609. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3JDL1              	100.00%		A3LPE0              	100.00%
Bootstrap support for G3JDL1 as seed ortholog is 100%.
Bootstrap support for A3LPE0 as seed ortholog is 100%.

Group of orthologs #1610. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3J775              	100.00%		A3LZ40              	100.00%
Bootstrap support for G3J775 as seed ortholog is 100%.
Bootstrap support for A3LZ40 as seed ortholog is 100%.

Group of orthologs #1611. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3JCT0              	100.00%		A3LV26              	100.00%
Bootstrap support for G3JCT0 as seed ortholog is 100%.
Bootstrap support for A3LV26 as seed ortholog is 100%.

Group of orthologs #1612. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3JM72              	100.00%		A3GGC1              	100.00%
Bootstrap support for G3JM72 as seed ortholog is 100%.
Bootstrap support for A3GGC1 as seed ortholog is 100%.

Group of orthologs #1613. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3JKL8              	100.00%		A3LNA6              	100.00%
Bootstrap support for G3JKL8 as seed ortholog is 100%.
Bootstrap support for A3LNA6 as seed ortholog is 100%.

Group of orthologs #1614. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:237

G3JH50              	100.00%		A3LXT1              	100.00%
Bootstrap support for G3JH50 as seed ortholog is 100%.
Bootstrap support for A3LXT1 as seed ortholog is 100%.

Group of orthologs #1615. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 S.stipitis:89

G3JUM6              	100.00%		A3LQV7              	100.00%
Bootstrap support for G3JUM6 as seed ortholog is 100%.
Bootstrap support for A3LQV7 as seed ortholog is 96%.

Group of orthologs #1616. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:236

G3J5Z8              	100.00%		A3LQJ1              	100.00%
Bootstrap support for G3J5Z8 as seed ortholog is 100%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #1617. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:236

G3J6N9              	100.00%		A3LTB7              	100.00%
Bootstrap support for G3J6N9 as seed ortholog is 100%.
Bootstrap support for A3LTB7 as seed ortholog is 100%.

Group of orthologs #1618. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:236

G3JDQ9              	100.00%		A3LR50              	100.00%
Bootstrap support for G3JDQ9 as seed ortholog is 100%.
Bootstrap support for A3LR50 as seed ortholog is 100%.

Group of orthologs #1619. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:236

G3JR19              	100.00%		A3GEV5              	100.00%
Bootstrap support for G3JR19 as seed ortholog is 100%.
Bootstrap support for A3GEV5 as seed ortholog is 100%.

Group of orthologs #1620. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:236

G3JLP3              	100.00%		A3LS95              	100.00%
Bootstrap support for G3JLP3 as seed ortholog is 100%.
Bootstrap support for A3LS95 as seed ortholog is 100%.

Group of orthologs #1621. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 S.stipitis:236

G3JKV7              	100.00%		A3LUN1              	100.00%
Bootstrap support for G3JKV7 as seed ortholog is 100%.
Bootstrap support for A3LUN1 as seed ortholog is 100%.

Group of orthologs #1622. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:235

G3JQD1              	100.00%		A3GF42              	100.00%
                    	       		A3LRX7              	8.36%
Bootstrap support for G3JQD1 as seed ortholog is 100%.
Bootstrap support for A3GF42 as seed ortholog is 100%.

Group of orthologs #1623. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:118

G3J417              	100.00%		A3LT68              	100.00%
Bootstrap support for G3J417 as seed ortholog is 99%.
Bootstrap support for A3LT68 as seed ortholog is 99%.

Group of orthologs #1624. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 S.stipitis:235

G3JLC5              	100.00%		A3GGE4              	100.00%
Bootstrap support for G3JLC5 as seed ortholog is 100%.
Bootstrap support for A3GGE4 as seed ortholog is 100%.

Group of orthologs #1625. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 S.stipitis:235

G3JJ71              	100.00%		A3LYI7              	100.00%
Bootstrap support for G3JJ71 as seed ortholog is 100%.
Bootstrap support for A3LYI7 as seed ortholog is 100%.

Group of orthologs #1626. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 S.stipitis:235

G3JQY9              	100.00%		A3LRW1              	100.00%
Bootstrap support for G3JQY9 as seed ortholog is 100%.
Bootstrap support for A3LRW1 as seed ortholog is 100%.

Group of orthologs #1627. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 S.stipitis:235

G3JSD8              	100.00%		A3LW35              	100.00%
Bootstrap support for G3JSD8 as seed ortholog is 100%.
Bootstrap support for A3LW35 as seed ortholog is 100%.

Group of orthologs #1628. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:136 S.stipitis:179

G3JQ80              	100.00%		A3LYC3              	100.00%
Bootstrap support for G3JQ80 as seed ortholog is 99%.
Bootstrap support for A3LYC3 as seed ortholog is 100%.

Group of orthologs #1629. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:234

G3J7W8              	100.00%		A3GG29              	100.00%
Bootstrap support for G3J7W8 as seed ortholog is 99%.
Bootstrap support for A3GG29 as seed ortholog is 100%.

Group of orthologs #1630. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:120

G3J468              	100.00%		A3LXT6              	100.00%
Bootstrap support for G3J468 as seed ortholog is 99%.
Bootstrap support for A3LXT6 as seed ortholog is 99%.

Group of orthologs #1631. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 S.stipitis:234

G3JAL6              	100.00%		A3LTJ0              	100.00%
Bootstrap support for G3JAL6 as seed ortholog is 100%.
Bootstrap support for A3LTJ0 as seed ortholog is 100%.

Group of orthologs #1632. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 S.stipitis:234

G3JKB2              	100.00%		A3GH04              	100.00%
Bootstrap support for G3JKB2 as seed ortholog is 100%.
Bootstrap support for A3GH04 as seed ortholog is 100%.

Group of orthologs #1633. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 S.stipitis:234

G3JBU5              	100.00%		A3M097              	100.00%
Bootstrap support for G3JBU5 as seed ortholog is 100%.
Bootstrap support for A3M097 as seed ortholog is 100%.

Group of orthologs #1634. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 S.stipitis:234

G3JSH3              	100.00%		A3LZZ2              	100.00%
Bootstrap support for G3JSH3 as seed ortholog is 100%.
Bootstrap support for A3LZZ2 as seed ortholog is 100%.

Group of orthologs #1635. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:233

G3J2Q8              	100.00%		A3LSA0              	100.00%
Bootstrap support for G3J2Q8 as seed ortholog is 100%.
Bootstrap support for A3LSA0 as seed ortholog is 100%.

Group of orthologs #1636. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:233

G3JDZ4              	100.00%		A3GHR9              	100.00%
Bootstrap support for G3JDZ4 as seed ortholog is 100%.
Bootstrap support for A3GHR9 as seed ortholog is 100%.

Group of orthologs #1637. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:233

G3JF50              	100.00%		A3GGX2              	100.00%
Bootstrap support for G3JF50 as seed ortholog is 100%.
Bootstrap support for A3GGX2 as seed ortholog is 100%.

Group of orthologs #1638. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:140

G3JGP8              	100.00%		A3GG28              	100.00%
Bootstrap support for G3JGP8 as seed ortholog is 100%.
Bootstrap support for A3GG28 as seed ortholog is 99%.

Group of orthologs #1639. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:233

G3JCZ4              	100.00%		A3LXY9              	100.00%
Bootstrap support for G3JCZ4 as seed ortholog is 100%.
Bootstrap support for A3LXY9 as seed ortholog is 100%.

Group of orthologs #1640. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:233

G3JHF0              	100.00%		A3LYI2              	100.00%
Bootstrap support for G3JHF0 as seed ortholog is 100%.
Bootstrap support for A3LYI2 as seed ortholog is 100%.

Group of orthologs #1641. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 S.stipitis:233

G3JUB1              	100.00%		A3LX39              	100.00%
Bootstrap support for G3JUB1 as seed ortholog is 100%.
Bootstrap support for A3LX39 as seed ortholog is 100%.

Group of orthologs #1642. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3J315              	100.00%		A3GH22              	100.00%
Bootstrap support for G3J315 as seed ortholog is 100%.
Bootstrap support for A3GH22 as seed ortholog is 100%.

Group of orthologs #1643. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3J5C5              	100.00%		A3LSR7              	100.00%
Bootstrap support for G3J5C5 as seed ortholog is 100%.
Bootstrap support for A3LSR7 as seed ortholog is 100%.

Group of orthologs #1644. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3J371              	100.00%		A3LVX9              	100.00%
Bootstrap support for G3J371 as seed ortholog is 100%.
Bootstrap support for A3LVX9 as seed ortholog is 100%.

Group of orthologs #1645. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3JKN1              	100.00%		A3GGK2              	100.00%
Bootstrap support for G3JKN1 as seed ortholog is 100%.
Bootstrap support for A3GGK2 as seed ortholog is 100%.

Group of orthologs #1646. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3J9D2              	100.00%		A3LZ51              	100.00%
Bootstrap support for G3J9D2 as seed ortholog is 100%.
Bootstrap support for A3LZ51 as seed ortholog is 100%.

Group of orthologs #1647. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3JHA2              	100.00%		A3LS60              	100.00%
Bootstrap support for G3JHA2 as seed ortholog is 100%.
Bootstrap support for A3LS60 as seed ortholog is 100%.

Group of orthologs #1648. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3JIH9              	100.00%		A3LW62              	100.00%
Bootstrap support for G3JIH9 as seed ortholog is 100%.
Bootstrap support for A3LW62 as seed ortholog is 100%.

Group of orthologs #1649. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3JKQ2              	100.00%		A3LU90              	100.00%
Bootstrap support for G3JKQ2 as seed ortholog is 100%.
Bootstrap support for A3LU90 as seed ortholog is 100%.

Group of orthologs #1650. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 S.stipitis:232

G3JUX1              	100.00%		A3LPT3              	100.00%
Bootstrap support for G3JUX1 as seed ortholog is 100%.
Bootstrap support for A3LPT3 as seed ortholog is 100%.

Group of orthologs #1651. Best score 231 bits
Score difference with first non-orthologous sequence - C.militaris:231 S.stipitis:231

G3J494              	100.00%		A3LWZ1              	100.00%
                    	       		A3LY78              	26.42%
Bootstrap support for G3J494 as seed ortholog is 100%.
Bootstrap support for A3LWZ1 as seed ortholog is 100%.

Group of orthologs #1652. Best score 231 bits
Score difference with first non-orthologous sequence - C.militaris:231 S.stipitis:231

G3J8M8              	100.00%		A3LPJ5              	100.00%
Bootstrap support for G3J8M8 as seed ortholog is 100%.
Bootstrap support for A3LPJ5 as seed ortholog is 100%.

Group of orthologs #1653. Best score 231 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:153

G3JAF1              	100.00%		A3LZD6              	100.00%
Bootstrap support for G3JAF1 as seed ortholog is 99%.
Bootstrap support for A3LZD6 as seed ortholog is 100%.

Group of orthologs #1654. Best score 231 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:140

G3JFP2              	100.00%		A3LU34              	100.00%
Bootstrap support for G3JFP2 as seed ortholog is 96%.
Bootstrap support for A3LU34 as seed ortholog is 99%.

Group of orthologs #1655. Best score 231 bits
Score difference with first non-orthologous sequence - C.militaris:231 S.stipitis:231

G3JKR9              	100.00%		A3LW97              	100.00%
Bootstrap support for G3JKR9 as seed ortholog is 100%.
Bootstrap support for A3LW97 as seed ortholog is 100%.

Group of orthologs #1656. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 S.stipitis:230

G3J5S3              	100.00%		A3LNC4              	100.00%
Bootstrap support for G3J5S3 as seed ortholog is 100%.
Bootstrap support for A3LNC4 as seed ortholog is 100%.

Group of orthologs #1657. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:230

G3J502              	100.00%		A3LRJ8              	100.00%
Bootstrap support for G3J502 as seed ortholog is 99%.
Bootstrap support for A3LRJ8 as seed ortholog is 100%.

Group of orthologs #1658. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 S.stipitis:230

G3J8L6              	100.00%		A3LZ11              	100.00%
Bootstrap support for G3J8L6 as seed ortholog is 100%.
Bootstrap support for A3LZ11 as seed ortholog is 100%.

Group of orthologs #1659. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 S.stipitis:230

G3JN27              	100.00%		A3GGK5              	100.00%
Bootstrap support for G3JN27 as seed ortholog is 100%.
Bootstrap support for A3GGK5 as seed ortholog is 100%.

Group of orthologs #1660. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:115

G3JHW8              	100.00%		A3LSJ2              	100.00%
Bootstrap support for G3JHW8 as seed ortholog is 99%.
Bootstrap support for A3LSJ2 as seed ortholog is 99%.

Group of orthologs #1661. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 S.stipitis:230

G3JFX2              	100.00%		A3LY00              	100.00%
Bootstrap support for G3JFX2 as seed ortholog is 100%.
Bootstrap support for A3LY00 as seed ortholog is 100%.

Group of orthologs #1662. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 S.stipitis:230

G3JPB6              	100.00%		A3LSD6              	100.00%
Bootstrap support for G3JPB6 as seed ortholog is 100%.
Bootstrap support for A3LSD6 as seed ortholog is 100%.

Group of orthologs #1663. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 S.stipitis:229

G3J343              	100.00%		A3LRW6              	100.00%
Bootstrap support for G3J343 as seed ortholog is 100%.
Bootstrap support for A3LRW6 as seed ortholog is 100%.

Group of orthologs #1664. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 S.stipitis:229

G3JEZ2              	100.00%		A3LS34              	100.00%
Bootstrap support for G3JEZ2 as seed ortholog is 100%.
Bootstrap support for A3LS34 as seed ortholog is 100%.

Group of orthologs #1665. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 S.stipitis:229

G3JEY9              	100.00%		A3LWG3              	100.00%
Bootstrap support for G3JEY9 as seed ortholog is 100%.
Bootstrap support for A3LWG3 as seed ortholog is 100%.

Group of orthologs #1666. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:135

G3JLV1              	100.00%		A3LS38              	100.00%
Bootstrap support for G3JLV1 as seed ortholog is 99%.
Bootstrap support for A3LS38 as seed ortholog is 100%.

Group of orthologs #1667. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 S.stipitis:229

G3JSB9              	100.00%		A3LR08              	100.00%
Bootstrap support for G3JSB9 as seed ortholog is 100%.
Bootstrap support for A3LR08 as seed ortholog is 100%.

Group of orthologs #1668. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:152

G3JUV5              	100.00%		A3LRD3              	100.00%
Bootstrap support for G3JUV5 as seed ortholog is 71%.
Alternative seed ortholog is G3JGK8 (44 bits away from this cluster)
Bootstrap support for A3LRD3 as seed ortholog is 99%.

Group of orthologs #1669. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:229

G3JR91              	100.00%		A3M0F7              	100.00%
Bootstrap support for G3JR91 as seed ortholog is 99%.
Bootstrap support for A3M0F7 as seed ortholog is 100%.

Group of orthologs #1670. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:228

G3J6F2              	100.00%		A3GEW4              	100.00%
Bootstrap support for G3J6F2 as seed ortholog is 99%.
Bootstrap support for A3GEW4 as seed ortholog is 100%.

Group of orthologs #1671. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 S.stipitis:228

G3J8B0              	100.00%		A3GGJ7              	100.00%
Bootstrap support for G3J8B0 as seed ortholog is 100%.
Bootstrap support for A3GGJ7 as seed ortholog is 100%.

Group of orthologs #1672. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:228

G3J7E6              	100.00%		A3LQY2              	100.00%
Bootstrap support for G3J7E6 as seed ortholog is 100%.
Bootstrap support for A3LQY2 as seed ortholog is 100%.

Group of orthologs #1673. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:60

G3JD65              	100.00%		A3LQ11              	100.00%
Bootstrap support for G3JD65 as seed ortholog is 98%.
Bootstrap support for A3LQ11 as seed ortholog is 99%.

Group of orthologs #1674. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 S.stipitis:228

G3JCJ5              	100.00%		A3LQV5              	100.00%
Bootstrap support for G3JCJ5 as seed ortholog is 100%.
Bootstrap support for A3LQV5 as seed ortholog is 100%.

Group of orthologs #1675. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 S.stipitis:228

G3JE57              	100.00%		A3LX25              	100.00%
Bootstrap support for G3JE57 as seed ortholog is 100%.
Bootstrap support for A3LX25 as seed ortholog is 100%.

Group of orthologs #1676. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 S.stipitis:228

G3JG96              	100.00%		A3LVJ6              	100.00%
Bootstrap support for G3JG96 as seed ortholog is 100%.
Bootstrap support for A3LVJ6 as seed ortholog is 100%.

Group of orthologs #1677. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 S.stipitis:227

G3J4L8              	100.00%		A3LS30              	100.00%
Bootstrap support for G3J4L8 as seed ortholog is 100%.
Bootstrap support for A3LS30 as seed ortholog is 100%.

Group of orthologs #1678. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 S.stipitis:227

G3J4Q6              	100.00%		A3LUS5              	100.00%
Bootstrap support for G3J4Q6 as seed ortholog is 100%.
Bootstrap support for A3LUS5 as seed ortholog is 100%.

Group of orthologs #1679. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 S.stipitis:227

G3JE15              	100.00%		A3LPG1              	100.00%
Bootstrap support for G3JE15 as seed ortholog is 100%.
Bootstrap support for A3LPG1 as seed ortholog is 100%.

Group of orthologs #1680. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 S.stipitis:227

G3JT81              	100.00%		A3GGT0              	100.00%
Bootstrap support for G3JT81 as seed ortholog is 100%.
Bootstrap support for A3GGT0 as seed ortholog is 100%.

Group of orthologs #1681. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 S.stipitis:227

G3JSG0              	100.00%		A3LQV6              	100.00%
Bootstrap support for G3JSG0 as seed ortholog is 100%.
Bootstrap support for A3LQV6 as seed ortholog is 100%.

Group of orthologs #1682. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:226

G3JGN5              	100.00%		A3GF85              	100.00%
Bootstrap support for G3JGN5 as seed ortholog is 99%.
Bootstrap support for A3GF85 as seed ortholog is 100%.

Group of orthologs #1683. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 S.stipitis:226

G3JNQ0              	100.00%		A3GGA6              	100.00%
Bootstrap support for G3JNQ0 as seed ortholog is 100%.
Bootstrap support for A3GGA6 as seed ortholog is 100%.

Group of orthologs #1684. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 S.stipitis:226

G3JJ52              	100.00%		A3LYR2              	100.00%
Bootstrap support for G3JJ52 as seed ortholog is 100%.
Bootstrap support for A3LYR2 as seed ortholog is 100%.

Group of orthologs #1685. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 S.stipitis:226

G3JMR0              	100.00%		A3LX85              	100.00%
Bootstrap support for G3JMR0 as seed ortholog is 100%.
Bootstrap support for A3LX85 as seed ortholog is 100%.

Group of orthologs #1686. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 S.stipitis:226

G3JQP5              	100.00%		A3LZ57              	100.00%
Bootstrap support for G3JQP5 as seed ortholog is 100%.
Bootstrap support for A3LZ57 as seed ortholog is 100%.

Group of orthologs #1687. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:225

G3JGC9              	100.00%		A3LX35              	100.00%
                    	       		A3LRB0              	24.05%
Bootstrap support for G3JGC9 as seed ortholog is 99%.
Bootstrap support for A3LX35 as seed ortholog is 100%.

Group of orthologs #1688. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 S.stipitis:225

G3J5M3              	100.00%		A3LTE3              	100.00%
Bootstrap support for G3J5M3 as seed ortholog is 100%.
Bootstrap support for A3LTE3 as seed ortholog is 100%.

Group of orthologs #1689. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:116

G3JDC0              	100.00%		A3GH66              	100.00%
Bootstrap support for G3JDC0 as seed ortholog is 100%.
Bootstrap support for A3GH66 as seed ortholog is 100%.

Group of orthologs #1690. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:225

G3JDG0              	100.00%		A3LRA1              	100.00%
Bootstrap support for G3JDG0 as seed ortholog is 99%.
Bootstrap support for A3LRA1 as seed ortholog is 100%.

Group of orthologs #1691. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:142 S.stipitis:225

G3JDL4              	100.00%		A3LRC8              	100.00%
Bootstrap support for G3JDL4 as seed ortholog is 100%.
Bootstrap support for A3LRC8 as seed ortholog is 100%.

Group of orthologs #1692. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:26

G3JEK6              	100.00%		A3LQN4              	100.00%
Bootstrap support for G3JEK6 as seed ortholog is 99%.
Bootstrap support for A3LQN4 as seed ortholog is 81%.

Group of orthologs #1693. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 S.stipitis:225

G3JQ39              	100.00%		A3GG11              	100.00%
Bootstrap support for G3JQ39 as seed ortholog is 100%.
Bootstrap support for A3GG11 as seed ortholog is 100%.

Group of orthologs #1694. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 S.stipitis:225

G3JP96              	100.00%		A3LZB0              	100.00%
Bootstrap support for G3JP96 as seed ortholog is 100%.
Bootstrap support for A3LZB0 as seed ortholog is 100%.

Group of orthologs #1695. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 S.stipitis:224

G3JHE6              	100.00%		A3GHF3              	100.00%
Bootstrap support for G3JHE6 as seed ortholog is 100%.
Bootstrap support for A3GHF3 as seed ortholog is 100%.

Group of orthologs #1696. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 S.stipitis:224

G3JJ59              	100.00%		A3GGJ3              	100.00%
Bootstrap support for G3JJ59 as seed ortholog is 100%.
Bootstrap support for A3GGJ3 as seed ortholog is 100%.

Group of orthologs #1697. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 S.stipitis:224

G3JJH3              	100.00%		A3LT54              	100.00%
Bootstrap support for G3JJH3 as seed ortholog is 100%.
Bootstrap support for A3LT54 as seed ortholog is 100%.

Group of orthologs #1698. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 S.stipitis:224

G3JRH1              	100.00%		A3LZC0              	100.00%
Bootstrap support for G3JRH1 as seed ortholog is 100%.
Bootstrap support for A3LZC0 as seed ortholog is 100%.

Group of orthologs #1699. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3J597              	100.00%		A3LQJ0              	100.00%
Bootstrap support for G3J597 as seed ortholog is 100%.
Bootstrap support for A3LQJ0 as seed ortholog is 100%.

Group of orthologs #1700. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3J8D3              	100.00%		A3GI89              	100.00%
Bootstrap support for G3J8D3 as seed ortholog is 100%.
Bootstrap support for A3GI89 as seed ortholog is 100%.

Group of orthologs #1701. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3J6R9              	100.00%		A3LVF4              	100.00%
Bootstrap support for G3J6R9 as seed ortholog is 100%.
Bootstrap support for A3LVF4 as seed ortholog is 100%.

Group of orthologs #1702. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3JBN4              	100.00%		A3LT59              	100.00%
Bootstrap support for G3JBN4 as seed ortholog is 100%.
Bootstrap support for A3LT59 as seed ortholog is 100%.

Group of orthologs #1703. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:149

G3JAU8              	100.00%		A3LWC5              	100.00%
Bootstrap support for G3JAU8 as seed ortholog is 100%.
Bootstrap support for A3LWC5 as seed ortholog is 99%.

Group of orthologs #1704. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:1

G3JD01              	100.00%		A3LUU0              	100.00%
Bootstrap support for G3JD01 as seed ortholog is 100%.
Bootstrap support for A3LUU0 as seed ortholog is 75%.

Group of orthologs #1705. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3JUA3              	100.00%		A3LMZ3              	100.00%
Bootstrap support for G3JUA3 as seed ortholog is 100%.
Bootstrap support for A3LMZ3 as seed ortholog is 100%.

Group of orthologs #1706. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3JMV8              	100.00%		A3LX44              	100.00%
Bootstrap support for G3JMV8 as seed ortholog is 100%.
Bootstrap support for A3LX44 as seed ortholog is 100%.

Group of orthologs #1707. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3JPW2              	100.00%		A3LVU3              	100.00%
Bootstrap support for G3JPW2 as seed ortholog is 100%.
Bootstrap support for A3LVU3 as seed ortholog is 100%.

Group of orthologs #1708. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3JKV3              	100.00%		A3M071              	100.00%
Bootstrap support for G3JKV3 as seed ortholog is 100%.
Bootstrap support for A3M071 as seed ortholog is 100%.

Group of orthologs #1709. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 S.stipitis:223

G3JTG5              	100.00%		A3M0J6              	100.00%
Bootstrap support for G3JTG5 as seed ortholog is 100%.
Bootstrap support for A3M0J6 as seed ortholog is 100%.

Group of orthologs #1710. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 S.stipitis:222

G3JFE1              	100.00%		A3GHZ0              	100.00%
Bootstrap support for G3JFE1 as seed ortholog is 100%.
Bootstrap support for A3GHZ0 as seed ortholog is 100%.

Group of orthologs #1711. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 S.stipitis:222

G3JH51              	100.00%		A3LN34              	100.00%
Bootstrap support for G3JH51 as seed ortholog is 100%.
Bootstrap support for A3LN34 as seed ortholog is 100%.

Group of orthologs #1712. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:222

G3JKQ0              	100.00%		A3LVQ8              	100.00%
Bootstrap support for G3JKQ0 as seed ortholog is 99%.
Bootstrap support for A3LVQ8 as seed ortholog is 100%.

Group of orthologs #1713. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 S.stipitis:222

G3JIQ6              	100.00%		A3LZN3              	100.00%
Bootstrap support for G3JIQ6 as seed ortholog is 100%.
Bootstrap support for A3LZN3 as seed ortholog is 100%.

Group of orthologs #1714. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 S.stipitis:221

G3JHY0              	100.00%		A3LQR7              	100.00%
                    	       		A3LYU0              	47.61%
Bootstrap support for G3JHY0 as seed ortholog is 100%.
Bootstrap support for A3LQR7 as seed ortholog is 100%.

Group of orthologs #1715. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:221

G3JIT1              	100.00%		A3LQR6              	100.00%
Bootstrap support for G3JIT1 as seed ortholog is 99%.
Bootstrap support for A3LQR6 as seed ortholog is 100%.

Group of orthologs #1716. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:141

G3JQX3              	100.00%		A3GFX4              	100.00%
Bootstrap support for G3JQX3 as seed ortholog is 99%.
Bootstrap support for A3GFX4 as seed ortholog is 99%.

Group of orthologs #1717. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 S.stipitis:221

G3JTR9              	100.00%		A3GG20              	100.00%
Bootstrap support for G3JTR9 as seed ortholog is 100%.
Bootstrap support for A3GG20 as seed ortholog is 100%.

Group of orthologs #1718. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:98

G3JI37              	100.00%		A3LTD2              	100.00%
                    	       		A3LWY5              	100.00%
                    	       		A3LS83              	25.74%
                    	       		A3LRZ1              	23.69%
                    	       		A3LWG4              	23.46%
                    	       		A3LN54              	20.96%
                    	       		A3LNV4              	17.77%
                    	       		A3GH15              	17.54%
                    	       		A3LZM3              	17.07%
Bootstrap support for G3JI37 as seed ortholog is 96%.
Bootstrap support for A3LTD2 as seed ortholog is 99%.
Bootstrap support for A3LWY5 as seed ortholog is 99%.

Group of orthologs #1719. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 S.stipitis:220

G3J5G2              	100.00%		A3GH96              	100.00%
                    	       		A3GH98              	44.45%
Bootstrap support for G3J5G2 as seed ortholog is 100%.
Bootstrap support for A3GH96 as seed ortholog is 100%.

Group of orthologs #1720. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:161

G3J8M3              	100.00%		A3LTM9              	100.00%
G3J9P9              	34.54%		
Bootstrap support for G3J8M3 as seed ortholog is 99%.
Bootstrap support for A3LTM9 as seed ortholog is 100%.

Group of orthologs #1721. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 S.stipitis:220

G3J9X0              	100.00%		A3LQL0              	100.00%
Bootstrap support for G3J9X0 as seed ortholog is 100%.
Bootstrap support for A3LQL0 as seed ortholog is 100%.

Group of orthologs #1722. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 S.stipitis:161

G3JFP5              	100.00%		A3LUR1              	100.00%
Bootstrap support for G3JFP5 as seed ortholog is 100%.
Bootstrap support for A3LUR1 as seed ortholog is 99%.

Group of orthologs #1723. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 S.stipitis:220

G3JUQ4              	100.00%		A3GGR6              	100.00%
Bootstrap support for G3JUQ4 as seed ortholog is 100%.
Bootstrap support for A3GGR6 as seed ortholog is 100%.

Group of orthologs #1724. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 S.stipitis:220

G3JQL3              	100.00%		A3LVK2              	100.00%
Bootstrap support for G3JQL3 as seed ortholog is 100%.
Bootstrap support for A3LVK2 as seed ortholog is 100%.

Group of orthologs #1725. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 S.stipitis:220

G3JUF7              	100.00%		A3LTN5              	100.00%
Bootstrap support for G3JUF7 as seed ortholog is 100%.
Bootstrap support for A3LTN5 as seed ortholog is 100%.

Group of orthologs #1726. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 S.stipitis:219

G3J2U5              	100.00%		A3LTH2              	100.00%
G3JQV2              	22.59%		
Bootstrap support for G3J2U5 as seed ortholog is 100%.
Bootstrap support for A3LTH2 as seed ortholog is 100%.

Group of orthologs #1727. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 S.stipitis:219

G3J421              	100.00%		A3LUD3              	100.00%
Bootstrap support for G3J421 as seed ortholog is 100%.
Bootstrap support for A3LUD3 as seed ortholog is 100%.

Group of orthologs #1728. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 S.stipitis:219

G3JIC9              	100.00%		A3LQC7              	100.00%
Bootstrap support for G3JIC9 as seed ortholog is 100%.
Bootstrap support for A3LQC7 as seed ortholog is 100%.

Group of orthologs #1729. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 S.stipitis:218

G3J380              	100.00%		A3LWI2              	100.00%
Bootstrap support for G3J380 as seed ortholog is 100%.
Bootstrap support for A3LWI2 as seed ortholog is 100%.

Group of orthologs #1730. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 S.stipitis:218

G3JA03              	100.00%		A3LV74              	100.00%
Bootstrap support for G3JA03 as seed ortholog is 100%.
Bootstrap support for A3LV74 as seed ortholog is 100%.

Group of orthologs #1731. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 S.stipitis:218

G3JEN8              	100.00%		A3LSC6              	100.00%
Bootstrap support for G3JEN8 as seed ortholog is 100%.
Bootstrap support for A3LSC6 as seed ortholog is 100%.

Group of orthologs #1732. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 S.stipitis:218

G3JI61              	100.00%		A3LVL7              	100.00%
Bootstrap support for G3JI61 as seed ortholog is 100%.
Bootstrap support for A3LVL7 as seed ortholog is 100%.

Group of orthologs #1733. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 S.stipitis:218

G3JQ46              	100.00%		A3LPT0              	100.00%
Bootstrap support for G3JQ46 as seed ortholog is 100%.
Bootstrap support for A3LPT0 as seed ortholog is 100%.

Group of orthologs #1734. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3J7T2              	100.00%		A3LRT6              	100.00%
Bootstrap support for G3J7T2 as seed ortholog is 100%.
Bootstrap support for A3LRT6 as seed ortholog is 100%.

Group of orthologs #1735. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3JDU7              	100.00%		A3LRW7              	100.00%
Bootstrap support for G3JDU7 as seed ortholog is 100%.
Bootstrap support for A3LRW7 as seed ortholog is 100%.

Group of orthologs #1736. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:114 S.stipitis:217

G3JPX1              	100.00%		A3GIC9              	100.00%
Bootstrap support for G3JPX1 as seed ortholog is 99%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #1737. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:75 S.stipitis:217

G3JE82              	100.00%		A3LZP4              	100.00%
Bootstrap support for G3JE82 as seed ortholog is 97%.
Bootstrap support for A3LZP4 as seed ortholog is 100%.

Group of orthologs #1738. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3JI27              	100.00%		A3LZ59              	100.00%
Bootstrap support for G3JI27 as seed ortholog is 100%.
Bootstrap support for A3LZ59 as seed ortholog is 100%.

Group of orthologs #1739. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3JJ93              	100.00%		A3LYF2              	100.00%
Bootstrap support for G3JJ93 as seed ortholog is 100%.
Bootstrap support for A3LYF2 as seed ortholog is 100%.

Group of orthologs #1740. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3JQ42              	100.00%		A3LTY6              	100.00%
Bootstrap support for G3JQ42 as seed ortholog is 100%.
Bootstrap support for A3LTY6 as seed ortholog is 100%.

Group of orthologs #1741. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3JIQ0              	100.00%		P49434              	100.00%
Bootstrap support for G3JIQ0 as seed ortholog is 100%.
Bootstrap support for P49434 as seed ortholog is 100%.

Group of orthologs #1742. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 S.stipitis:217

G3JL31              	100.00%		A3LZW4              	100.00%
Bootstrap support for G3JL31 as seed ortholog is 100%.
Bootstrap support for A3LZW4 as seed ortholog is 100%.

Group of orthologs #1743. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JCB6              	100.00%		A3LNS0              	100.00%
Bootstrap support for G3JCB6 as seed ortholog is 100%.
Bootstrap support for A3LNS0 as seed ortholog is 100%.

Group of orthologs #1744. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JJC8              	100.00%		A3GGL6              	100.00%
Bootstrap support for G3JJC8 as seed ortholog is 100%.
Bootstrap support for A3GGL6 as seed ortholog is 100%.

Group of orthologs #1745. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3J9I4              	100.00%		A3LX71              	100.00%
Bootstrap support for G3J9I4 as seed ortholog is 100%.
Bootstrap support for A3LX71 as seed ortholog is 100%.

Group of orthologs #1746. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JHK6              	100.00%		A3LX75              	100.00%
Bootstrap support for G3JHK6 as seed ortholog is 100%.
Bootstrap support for A3LX75 as seed ortholog is 100%.

Group of orthologs #1747. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JIF6              	100.00%		A3LXU5              	100.00%
Bootstrap support for G3JIF6 as seed ortholog is 100%.
Bootstrap support for A3LXU5 as seed ortholog is 100%.

Group of orthologs #1748. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JNS4              	100.00%		A3LT53              	100.00%
Bootstrap support for G3JNS4 as seed ortholog is 100%.
Bootstrap support for A3LT53 as seed ortholog is 100%.

Group of orthologs #1749. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JTM8              	100.00%		A3LPD5              	100.00%
Bootstrap support for G3JTM8 as seed ortholog is 100%.
Bootstrap support for A3LPD5 as seed ortholog is 100%.

Group of orthologs #1750. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 S.stipitis:216

G3JUC8              	100.00%		A3M0L9              	100.00%
Bootstrap support for G3JUC8 as seed ortholog is 100%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #1751. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:94

G3JDR6              	100.00%		A3GGS8              	100.00%
Bootstrap support for G3JDR6 as seed ortholog is 99%.
Bootstrap support for A3GGS8 as seed ortholog is 99%.

Group of orthologs #1752. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 S.stipitis:215

G3JIF2              	100.00%		A3GF79              	100.00%
Bootstrap support for G3JIF2 as seed ortholog is 100%.
Bootstrap support for A3GF79 as seed ortholog is 100%.

Group of orthologs #1753. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:215

G3JK19              	100.00%		A3GFB3              	100.00%
Bootstrap support for G3JK19 as seed ortholog is 100%.
Bootstrap support for A3GFB3 as seed ortholog is 100%.

Group of orthologs #1754. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 S.stipitis:215

G3JF79              	100.00%		A3LR70              	100.00%
Bootstrap support for G3JF79 as seed ortholog is 100%.
Bootstrap support for A3LR70 as seed ortholog is 100%.

Group of orthologs #1755. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:144

G3JD94              	100.00%		A3LZT1              	100.00%
Bootstrap support for G3JD94 as seed ortholog is 99%.
Bootstrap support for A3LZT1 as seed ortholog is 100%.

Group of orthologs #1756. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 S.stipitis:164

G3JHV9              	100.00%		A3LW50              	100.00%
Bootstrap support for G3JHV9 as seed ortholog is 100%.
Bootstrap support for A3LW50 as seed ortholog is 100%.

Group of orthologs #1757. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:214 S.stipitis:214

G3J8G6              	100.00%		A3LR86              	100.00%
Bootstrap support for G3J8G6 as seed ortholog is 100%.
Bootstrap support for A3LR86 as seed ortholog is 100%.

Group of orthologs #1758. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:214 S.stipitis:214

G3JFA2              	100.00%		A3LPY3              	100.00%
Bootstrap support for G3JFA2 as seed ortholog is 100%.
Bootstrap support for A3LPY3 as seed ortholog is 100%.

Group of orthologs #1759. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:170 S.stipitis:214

G3JFJ9              	100.00%		A3LSR5              	100.00%
Bootstrap support for G3JFJ9 as seed ortholog is 100%.
Bootstrap support for A3LSR5 as seed ortholog is 100%.

Group of orthologs #1760. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:214 S.stipitis:214

G3JK23              	100.00%		A3LNC8              	100.00%
Bootstrap support for G3JK23 as seed ortholog is 100%.
Bootstrap support for A3LNC8 as seed ortholog is 100%.

Group of orthologs #1761. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:214

G3JN28              	100.00%		A3GGH5              	100.00%
Bootstrap support for G3JN28 as seed ortholog is 100%.
Bootstrap support for A3GGH5 as seed ortholog is 100%.

Group of orthologs #1762. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:214

G3JTS9              	100.00%		A3LYS1              	100.00%
Bootstrap support for G3JTS9 as seed ortholog is 97%.
Bootstrap support for A3LYS1 as seed ortholog is 100%.

Group of orthologs #1763. Best score 213 bits
Score difference with first non-orthologous sequence - C.militaris:213 S.stipitis:213

G3JN63              	100.00%		A3LUX4              	100.00%
                    	       		A3GI30              	32.54%
Bootstrap support for G3JN63 as seed ortholog is 100%.
Bootstrap support for A3LUX4 as seed ortholog is 100%.

Group of orthologs #1764. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3J4S0              	100.00%		A3LQD1              	100.00%
Bootstrap support for G3J4S0 as seed ortholog is 100%.
Bootstrap support for A3LQD1 as seed ortholog is 100%.

Group of orthologs #1765. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:157

G3J3Z8              	100.00%		A3LUQ7              	100.00%
Bootstrap support for G3J3Z8 as seed ortholog is 100%.
Bootstrap support for A3LUQ7 as seed ortholog is 99%.

Group of orthologs #1766. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3JGJ9              	100.00%		A3GI14              	100.00%
Bootstrap support for G3JGJ9 as seed ortholog is 100%.
Bootstrap support for A3GI14 as seed ortholog is 100%.

Group of orthologs #1767. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3JK90              	100.00%		A3GHI7              	100.00%
Bootstrap support for G3JK90 as seed ortholog is 100%.
Bootstrap support for A3GHI7 as seed ortholog is 100%.

Group of orthologs #1768. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3JHK2              	100.00%		A3LS53              	100.00%
Bootstrap support for G3JHK2 as seed ortholog is 100%.
Bootstrap support for A3LS53 as seed ortholog is 100%.

Group of orthologs #1769. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:212

G3JKF2              	100.00%		A3LPD4              	100.00%
Bootstrap support for G3JKF2 as seed ortholog is 99%.
Bootstrap support for A3LPD4 as seed ortholog is 100%.

Group of orthologs #1770. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3JAG3              	100.00%		A3M0J0              	100.00%
Bootstrap support for G3JAG3 as seed ortholog is 100%.
Bootstrap support for A3M0J0 as seed ortholog is 100%.

Group of orthologs #1771. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3JH00              	100.00%		A3M078              	100.00%
Bootstrap support for G3JH00 as seed ortholog is 100%.
Bootstrap support for A3M078 as seed ortholog is 100%.

Group of orthologs #1772. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:212

G3JLU8              	100.00%		A3LYA6              	100.00%
Bootstrap support for G3JLU8 as seed ortholog is 100%.
Bootstrap support for A3LYA6 as seed ortholog is 100%.

Group of orthologs #1773. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 S.stipitis:75

G3JNN9              	100.00%		A3M047              	100.00%
Bootstrap support for G3JNN9 as seed ortholog is 100%.
Bootstrap support for A3M047 as seed ortholog is 99%.

Group of orthologs #1774. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3J7X0              	100.00%		A3LPM6              	100.00%
                    	       		A3LSX4              	5.88%
Bootstrap support for G3J7X0 as seed ortholog is 100%.
Bootstrap support for A3LPM6 as seed ortholog is 100%.

Group of orthologs #1775. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3JBT5              	100.00%		A3LNH6              	100.00%
Bootstrap support for G3JBT5 as seed ortholog is 100%.
Bootstrap support for A3LNH6 as seed ortholog is 100%.

Group of orthologs #1776. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3JEF8              	100.00%		A3LPA0              	100.00%
Bootstrap support for G3JEF8 as seed ortholog is 100%.
Bootstrap support for A3LPA0 as seed ortholog is 100%.

Group of orthologs #1777. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3J6B3              	100.00%		A3LYD1              	100.00%
Bootstrap support for G3J6B3 as seed ortholog is 100%.
Bootstrap support for A3LYD1 as seed ortholog is 100%.

Group of orthologs #1778. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3JH05              	100.00%		A3LPI0              	100.00%
Bootstrap support for G3JH05 as seed ortholog is 100%.
Bootstrap support for A3LPI0 as seed ortholog is 100%.

Group of orthologs #1779. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3JIZ8              	100.00%		A3LND1              	100.00%
Bootstrap support for G3JIZ8 as seed ortholog is 100%.
Bootstrap support for A3LND1 as seed ortholog is 100%.

Group of orthologs #1780. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3JN11              	100.00%		A3LN29              	100.00%
Bootstrap support for G3JN11 as seed ortholog is 100%.
Bootstrap support for A3LN29 as seed ortholog is 100%.

Group of orthologs #1781. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 S.stipitis:211

G3JFK5              	100.00%		A3LXS4              	100.00%
Bootstrap support for G3JFK5 as seed ortholog is 100%.
Bootstrap support for A3LXS4 as seed ortholog is 100%.

Group of orthologs #1782. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JMR7              	100.00%		A3LRQ7              	100.00%
                    	       		A3LVV1              	93.86%
Bootstrap support for G3JMR7 as seed ortholog is 100%.
Bootstrap support for A3LRQ7 as seed ortholog is 100%.

Group of orthologs #1783. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:123

G3J629              	100.00%		A3LR20              	100.00%
Bootstrap support for G3J629 as seed ortholog is 98%.
Bootstrap support for A3LR20 as seed ortholog is 99%.

Group of orthologs #1784. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JDU6              	100.00%		A3LNQ2              	100.00%
Bootstrap support for G3JDU6 as seed ortholog is 100%.
Bootstrap support for A3LNQ2 as seed ortholog is 100%.

Group of orthologs #1785. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:165

G3JFK0              	100.00%		A3LQA8              	100.00%
Bootstrap support for G3JFK0 as seed ortholog is 100%.
Bootstrap support for A3LQA8 as seed ortholog is 99%.

Group of orthologs #1786. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JJE7              	100.00%		A3GHF9              	100.00%
Bootstrap support for G3JJE7 as seed ortholog is 100%.
Bootstrap support for A3GHF9 as seed ortholog is 100%.

Group of orthologs #1787. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JIS6              	100.00%		A3LNS5              	100.00%
Bootstrap support for G3JIS6 as seed ortholog is 100%.
Bootstrap support for A3LNS5 as seed ortholog is 100%.

Group of orthologs #1788. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:210

G3JQA3              	100.00%		A3GIA6              	100.00%
Bootstrap support for G3JQA3 as seed ortholog is 99%.
Bootstrap support for A3GIA6 as seed ortholog is 100%.

Group of orthologs #1789. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JQM3              	100.00%		A3GID4              	100.00%
Bootstrap support for G3JQM3 as seed ortholog is 100%.
Bootstrap support for A3GID4 as seed ortholog is 100%.

Group of orthologs #1790. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JFH2              	100.00%		A3M0G9              	100.00%
Bootstrap support for G3JFH2 as seed ortholog is 100%.
Bootstrap support for A3M0G9 as seed ortholog is 100%.

Group of orthologs #1791. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JUN5              	100.00%		A3GH31              	100.00%
Bootstrap support for G3JUN5 as seed ortholog is 100%.
Bootstrap support for A3GH31 as seed ortholog is 100%.

Group of orthologs #1792. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JSZ3              	100.00%		A3LQB2              	100.00%
Bootstrap support for G3JSZ3 as seed ortholog is 100%.
Bootstrap support for A3LQB2 as seed ortholog is 100%.

Group of orthologs #1793. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JKT2              	100.00%		A3LZ25              	100.00%
Bootstrap support for G3JKT2 as seed ortholog is 100%.
Bootstrap support for A3LZ25 as seed ortholog is 100%.

Group of orthologs #1794. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JTM1              	100.00%		A3LTN3              	100.00%
Bootstrap support for G3JTM1 as seed ortholog is 100%.
Bootstrap support for A3LTN3 as seed ortholog is 100%.

Group of orthologs #1795. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 S.stipitis:210

G3JSW9              	100.00%		A3LW86              	100.00%
Bootstrap support for G3JSW9 as seed ortholog is 100%.
Bootstrap support for A3LW86 as seed ortholog is 100%.

Group of orthologs #1796. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3J418              	100.00%		A3GFM0              	100.00%
Bootstrap support for G3J418 as seed ortholog is 100%.
Bootstrap support for A3GFM0 as seed ortholog is 100%.

Group of orthologs #1797. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3J3M8              	100.00%		A3GH85              	100.00%
Bootstrap support for G3J3M8 as seed ortholog is 100%.
Bootstrap support for A3GH85 as seed ortholog is 100%.

Group of orthologs #1798. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3J5L0              	100.00%		A3LSI8              	100.00%
Bootstrap support for G3J5L0 as seed ortholog is 100%.
Bootstrap support for A3LSI8 as seed ortholog is 100%.

Group of orthologs #1799. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3J987              	100.00%		A3LQN2              	100.00%
Bootstrap support for G3J987 as seed ortholog is 100%.
Bootstrap support for A3LQN2 as seed ortholog is 100%.

Group of orthologs #1800. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3JFI1              	100.00%		A3GHN0              	100.00%
Bootstrap support for G3JFI1 as seed ortholog is 100%.
Bootstrap support for A3GHN0 as seed ortholog is 100%.

Group of orthologs #1801. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3J5A4              	100.00%		A3LYU5              	100.00%
Bootstrap support for G3J5A4 as seed ortholog is 100%.
Bootstrap support for A3LYU5 as seed ortholog is 100%.

Group of orthologs #1802. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3JEF5              	100.00%		A3LTS4              	100.00%
Bootstrap support for G3JEF5 as seed ortholog is 100%.
Bootstrap support for A3LTS4 as seed ortholog is 100%.

Group of orthologs #1803. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 S.stipitis:209

G3JJY3              	100.00%		A3LUS9              	100.00%
Bootstrap support for G3JJY3 as seed ortholog is 100%.
Bootstrap support for A3LUS9 as seed ortholog is 100%.

Group of orthologs #1804. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:209

G3JK81              	100.00%		A3LW68              	100.00%
Bootstrap support for G3JK81 as seed ortholog is 99%.
Bootstrap support for A3LW68 as seed ortholog is 100%.

Group of orthologs #1805. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:6 S.stipitis:208

G3JBL0              	100.00%		A3GGW2              	100.00%
                    	       		A3LWT6              	22.06%
                    	       		A3LZP5              	21.46%
Bootstrap support for G3JBL0 as seed ortholog is 67%.
Alternative seed ortholog is G3JGX4 (6 bits away from this cluster)
Bootstrap support for A3GGW2 as seed ortholog is 100%.

Group of orthologs #1806. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:125 S.stipitis:110

G3J4J6              	100.00%		A3LQB1              	100.00%
Bootstrap support for G3J4J6 as seed ortholog is 99%.
Bootstrap support for A3LQB1 as seed ortholog is 94%.

Group of orthologs #1807. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 S.stipitis:208

G3JI43              	100.00%		A3LPW6              	100.00%
Bootstrap support for G3JI43 as seed ortholog is 100%.
Bootstrap support for A3LPW6 as seed ortholog is 100%.

Group of orthologs #1808. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 S.stipitis:208

G3JL92              	100.00%		A3LQN1              	100.00%
Bootstrap support for G3JL92 as seed ortholog is 100%.
Bootstrap support for A3LQN1 as seed ortholog is 100%.

Group of orthologs #1809. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 S.stipitis:208

G3JJU3              	100.00%		A3LVM9              	100.00%
Bootstrap support for G3JJU3 as seed ortholog is 100%.
Bootstrap support for A3LVM9 as seed ortholog is 100%.

Group of orthologs #1810. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:208

G3JPS8              	100.00%		A3LVM1              	100.00%
Bootstrap support for G3JPS8 as seed ortholog is 99%.
Bootstrap support for A3LVM1 as seed ortholog is 100%.

Group of orthologs #1811. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:207

G3JFT9              	100.00%		A3GFK9              	100.00%
                    	       		A3LT40              	13.66%
Bootstrap support for G3JFT9 as seed ortholog is 100%.
Bootstrap support for A3GFK9 as seed ortholog is 100%.

Group of orthologs #1812. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:207

G3J687              	100.00%		A3M0E3              	100.00%
                    	       		A3LX34              	37.58%
Bootstrap support for G3J687 as seed ortholog is 100%.
Bootstrap support for A3M0E3 as seed ortholog is 100%.

Group of orthologs #1813. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:207

G3J3P1              	100.00%		A3LZR1              	100.00%
Bootstrap support for G3J3P1 as seed ortholog is 100%.
Bootstrap support for A3LZR1 as seed ortholog is 100%.

Group of orthologs #1814. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:207

G3JQM2              	100.00%		A3LUL3              	100.00%
Bootstrap support for G3JQM2 as seed ortholog is 100%.
Bootstrap support for A3LUL3 as seed ortholog is 100%.

Group of orthologs #1815. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 S.stipitis:69

G3JUZ5              	100.00%		A3LT08              	100.00%
Bootstrap support for G3JUZ5 as seed ortholog is 100%.
Bootstrap support for A3LT08 as seed ortholog is 93%.

Group of orthologs #1816. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:85

G3J3S5              	100.00%		A3LXE7              	100.00%
Bootstrap support for G3J3S5 as seed ortholog is 100%.
Bootstrap support for A3LXE7 as seed ortholog is 99%.

Group of orthologs #1817. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:206

G3JA00              	100.00%		A3LS61              	100.00%
Bootstrap support for G3JA00 as seed ortholog is 100%.
Bootstrap support for A3LS61 as seed ortholog is 100%.

Group of orthologs #1818. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:206

G3JIQ2              	100.00%		A3GF63              	100.00%
Bootstrap support for G3JIQ2 as seed ortholog is 100%.
Bootstrap support for A3GF63 as seed ortholog is 100%.

Group of orthologs #1819. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:206

G3JA95              	100.00%		A3M0N0              	100.00%
Bootstrap support for G3JA95 as seed ortholog is 100%.
Bootstrap support for A3M0N0 as seed ortholog is 100%.

Group of orthologs #1820. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:206

G3JN61              	100.00%		A3LNX5              	100.00%
Bootstrap support for G3JN61 as seed ortholog is 100%.
Bootstrap support for A3LNX5 as seed ortholog is 100%.

Group of orthologs #1821. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 S.stipitis:7

G3JRF2              	100.00%		A3LW67              	100.00%
Bootstrap support for G3JRF2 as seed ortholog is 100%.
Bootstrap support for A3LW67 as seed ortholog is 56%.
Alternative seed ortholog is A3LPA4 (7 bits away from this cluster)

Group of orthologs #1822. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:205

G3J851              	100.00%		A3LS36              	100.00%
Bootstrap support for G3J851 as seed ortholog is 100%.
Bootstrap support for A3LS36 as seed ortholog is 100%.

Group of orthologs #1823. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:50

G3JDA0              	100.00%		A3LRU8              	100.00%
Bootstrap support for G3JDA0 as seed ortholog is 100%.
Bootstrap support for A3LRU8 as seed ortholog is 89%.

Group of orthologs #1824. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:205

G3JH87              	100.00%		A3LP30              	100.00%
Bootstrap support for G3JH87 as seed ortholog is 100%.
Bootstrap support for A3LP30 as seed ortholog is 100%.

Group of orthologs #1825. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:205

G3J9I7              	100.00%		A3LWV9              	100.00%
Bootstrap support for G3J9I7 as seed ortholog is 100%.
Bootstrap support for A3LWV9 as seed ortholog is 100%.

Group of orthologs #1826. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:205

G3JEK8              	100.00%		A3LSX2              	100.00%
Bootstrap support for G3JEK8 as seed ortholog is 100%.
Bootstrap support for A3LSX2 as seed ortholog is 100%.

Group of orthologs #1827. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 S.stipitis:205

G3JFN3              	100.00%		A3LUJ0              	100.00%
Bootstrap support for G3JFN3 as seed ortholog is 100%.
Bootstrap support for A3LUJ0 as seed ortholog is 100%.

Group of orthologs #1828. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:205

G3JIB4              	100.00%		A3LZQ4              	100.00%
Bootstrap support for G3JIB4 as seed ortholog is 99%.
Bootstrap support for A3LZQ4 as seed ortholog is 100%.

Group of orthologs #1829. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:204 S.stipitis:204

G3J3R2              	100.00%		A3LN33              	100.00%
Bootstrap support for G3J3R2 as seed ortholog is 100%.
Bootstrap support for A3LN33 as seed ortholog is 100%.

Group of orthologs #1830. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:204 S.stipitis:77

G3JAV3              	100.00%		A3LTP0              	100.00%
Bootstrap support for G3JAV3 as seed ortholog is 100%.
Bootstrap support for A3LTP0 as seed ortholog is 82%.

Group of orthologs #1831. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:15 S.stipitis:204

G3JAS0              	100.00%		A3LVV4              	100.00%
Bootstrap support for G3JAS0 as seed ortholog is 64%.
Alternative seed ortholog is G3JMM4 (15 bits away from this cluster)
Bootstrap support for A3LVV4 as seed ortholog is 100%.

Group of orthologs #1832. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:204 S.stipitis:204

G3JFF5              	100.00%		A3LTG1              	100.00%
Bootstrap support for G3JFF5 as seed ortholog is 100%.
Bootstrap support for A3LTG1 as seed ortholog is 100%.

Group of orthologs #1833. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:31 S.stipitis:92

G3JAD1              	100.00%		P50167              	100.00%
Bootstrap support for G3JAD1 as seed ortholog is 82%.
Bootstrap support for P50167 as seed ortholog is 99%.

Group of orthologs #1834. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:204 S.stipitis:204

G3JRA8              	100.00%		A3LSW2              	100.00%
Bootstrap support for G3JRA8 as seed ortholog is 100%.
Bootstrap support for A3LSW2 as seed ortholog is 100%.

Group of orthologs #1835. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3J3S6              	100.00%		A3LXE6              	100.00%
                    	       		A3LZZ1              	95.92%
Bootstrap support for G3J3S6 as seed ortholog is 100%.
Bootstrap support for A3LXE6 as seed ortholog is 100%.

Group of orthologs #1836. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3J399              	100.00%		A3LPX1              	100.00%
Bootstrap support for G3J399 as seed ortholog is 100%.
Bootstrap support for A3LPX1 as seed ortholog is 100%.

Group of orthologs #1837. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:203

G3JAB7              	100.00%		A3LPC4              	100.00%
Bootstrap support for G3JAB7 as seed ortholog is 99%.
Bootstrap support for A3LPC4 as seed ortholog is 100%.

Group of orthologs #1838. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3JBB9              	100.00%		A3LQF9              	100.00%
Bootstrap support for G3JBB9 as seed ortholog is 100%.
Bootstrap support for A3LQF9 as seed ortholog is 100%.

Group of orthologs #1839. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3J379              	100.00%		A3LYV8              	100.00%
Bootstrap support for G3J379 as seed ortholog is 100%.
Bootstrap support for A3LYV8 as seed ortholog is 100%.

Group of orthologs #1840. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3JF39              	100.00%		A3LMY0              	100.00%
Bootstrap support for G3JF39 as seed ortholog is 100%.
Bootstrap support for A3LMY0 as seed ortholog is 100%.

Group of orthologs #1841. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3JRU2              	100.00%		A3GGM8              	100.00%
Bootstrap support for G3JRU2 as seed ortholog is 100%.
Bootstrap support for A3GGM8 as seed ortholog is 100%.

Group of orthologs #1842. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 S.stipitis:203

G3JQK9              	100.00%		A3LX84              	100.00%
Bootstrap support for G3JQK9 as seed ortholog is 100%.
Bootstrap support for A3LX84 as seed ortholog is 100%.

Group of orthologs #1843. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:202

G3JQC3              	100.00%		A3LVY3              	100.00%
                    	       		A3LTI5              	25.72%
                    	       		A3LZX7              	5.20%
Bootstrap support for G3JQC3 as seed ortholog is 99%.
Bootstrap support for A3LVY3 as seed ortholog is 100%.

Group of orthologs #1844. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 S.stipitis:202

G3J3N8              	100.00%		A3LSV6              	100.00%
Bootstrap support for G3J3N8 as seed ortholog is 100%.
Bootstrap support for A3LSV6 as seed ortholog is 100%.

Group of orthologs #1845. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 S.stipitis:202

G3JBG0              	100.00%		A3LP14              	100.00%
Bootstrap support for G3JBG0 as seed ortholog is 100%.
Bootstrap support for A3LP14 as seed ortholog is 100%.

Group of orthologs #1846. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 S.stipitis:202

G3J6Y3              	100.00%		A3LXP2              	100.00%
Bootstrap support for G3J6Y3 as seed ortholog is 100%.
Bootstrap support for A3LXP2 as seed ortholog is 100%.

Group of orthologs #1847. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 S.stipitis:202

G3J6W7              	100.00%		A3LZZ9              	100.00%
Bootstrap support for G3J6W7 as seed ortholog is 100%.
Bootstrap support for A3LZZ9 as seed ortholog is 100%.

Group of orthologs #1848. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:155

G3JH93              	100.00%		A3LVP0              	100.00%
Bootstrap support for G3JH93 as seed ortholog is 98%.
Bootstrap support for A3LVP0 as seed ortholog is 99%.

Group of orthologs #1849. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:201

G3J758              	100.00%		A3LVE3              	100.00%
Bootstrap support for G3J758 as seed ortholog is 97%.
Bootstrap support for A3LVE3 as seed ortholog is 100%.

Group of orthologs #1850. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:133

G3JGG5              	100.00%		A3LNL5              	100.00%
Bootstrap support for G3JGG5 as seed ortholog is 100%.
Bootstrap support for A3LNL5 as seed ortholog is 99%.

Group of orthologs #1851. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:124

G3J819              	100.00%		A3LXL4              	100.00%
Bootstrap support for G3J819 as seed ortholog is 100%.
Bootstrap support for A3LXL4 as seed ortholog is 99%.

Group of orthologs #1852. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:201

G3J835              	100.00%		A3LZK6              	100.00%
Bootstrap support for G3J835 as seed ortholog is 100%.
Bootstrap support for A3LZK6 as seed ortholog is 100%.

Group of orthologs #1853. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:201

G3J9E4              	100.00%		A3LYI3              	100.00%
Bootstrap support for G3J9E4 as seed ortholog is 100%.
Bootstrap support for A3LYI3 as seed ortholog is 100%.

Group of orthologs #1854. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:201

G3JB38              	100.00%		A3LWU4              	100.00%
Bootstrap support for G3JB38 as seed ortholog is 100%.
Bootstrap support for A3LWU4 as seed ortholog is 100%.

Group of orthologs #1855. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:201

G3JGK7              	100.00%		A3LSR8              	100.00%
Bootstrap support for G3JGK7 as seed ortholog is 100%.
Bootstrap support for A3LSR8 as seed ortholog is 100%.

Group of orthologs #1856. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 S.stipitis:201

G3JEF3              	100.00%		A3LYN3              	100.00%
Bootstrap support for G3JEF3 as seed ortholog is 100%.
Bootstrap support for A3LYN3 as seed ortholog is 100%.

Group of orthologs #1857. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:99

G3JL50              	100.00%		A3LNQ0              	100.00%
                    	       		A3LNP9              	44.01%
Bootstrap support for G3JL50 as seed ortholog is 99%.
Bootstrap support for A3LNQ0 as seed ortholog is 99%.

Group of orthologs #1858. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3J512              	100.00%		A3LSV7              	100.00%
Bootstrap support for G3J512 as seed ortholog is 100%.
Bootstrap support for A3LSV7 as seed ortholog is 100%.

Group of orthologs #1859. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3J770              	100.00%		A3LXK0              	100.00%
Bootstrap support for G3J770 as seed ortholog is 100%.
Bootstrap support for A3LXK0 as seed ortholog is 100%.

Group of orthologs #1860. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3JCV4              	100.00%		A3LTT4              	100.00%
Bootstrap support for G3JCV4 as seed ortholog is 100%.
Bootstrap support for A3LTT4 as seed ortholog is 100%.

Group of orthologs #1861. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3JFJ6              	100.00%		A3LRY2              	100.00%
Bootstrap support for G3JFJ6 as seed ortholog is 100%.
Bootstrap support for A3LRY2 as seed ortholog is 100%.

Group of orthologs #1862. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3JM94              	100.00%		A3GGF3              	100.00%
Bootstrap support for G3JM94 as seed ortholog is 100%.
Bootstrap support for A3GGF3 as seed ortholog is 100%.

Group of orthologs #1863. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3JLN5              	100.00%		A3LMU6              	100.00%
Bootstrap support for G3JLN5 as seed ortholog is 100%.
Bootstrap support for A3LMU6 as seed ortholog is 100%.

Group of orthologs #1864. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 S.stipitis:200

G3JJD3              	100.00%		A3LVD5              	100.00%
Bootstrap support for G3JJD3 as seed ortholog is 100%.
Bootstrap support for A3LVD5 as seed ortholog is 100%.

Group of orthologs #1865. Best score 199 bits
Score difference with first non-orthologous sequence - C.militaris:199 S.stipitis:199

G3JQU4              	100.00%		A3GGZ2              	100.00%
Bootstrap support for G3JQU4 as seed ortholog is 100%.
Bootstrap support for A3GGZ2 as seed ortholog is 100%.

Group of orthologs #1866. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 S.stipitis:198

G3J2Z4              	100.00%		A3LVL2              	100.00%
G3J8V3              	9.68%		
Bootstrap support for G3J2Z4 as seed ortholog is 100%.
Bootstrap support for A3LVL2 as seed ortholog is 100%.

Group of orthologs #1867. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 S.stipitis:198

G3J774              	100.00%		A3GHC2              	100.00%
Bootstrap support for G3J774 as seed ortholog is 100%.
Bootstrap support for A3GHC2 as seed ortholog is 100%.

Group of orthologs #1868. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:113

G3J8Z7              	100.00%		A3LV62              	100.00%
Bootstrap support for G3J8Z7 as seed ortholog is 99%.
Bootstrap support for A3LV62 as seed ortholog is 99%.

Group of orthologs #1869. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:133

G3JGH0              	100.00%		A3LSC5              	100.00%
Bootstrap support for G3JGH0 as seed ortholog is 95%.
Bootstrap support for A3LSC5 as seed ortholog is 99%.

Group of orthologs #1870. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:41 S.stipitis:81

G3JEU4              	100.00%		A3LWC2              	100.00%
Bootstrap support for G3JEU4 as seed ortholog is 90%.
Bootstrap support for A3LWC2 as seed ortholog is 99%.

Group of orthologs #1871. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 S.stipitis:198

G3JQR1              	100.00%		A3LQF1              	100.00%
Bootstrap support for G3JQR1 as seed ortholog is 100%.
Bootstrap support for A3LQF1 as seed ortholog is 100%.

Group of orthologs #1872. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3J514              	100.00%		A3GFQ7              	100.00%
Bootstrap support for G3J514 as seed ortholog is 100%.
Bootstrap support for A3GFQ7 as seed ortholog is 100%.

Group of orthologs #1873. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JA43              	100.00%		A3LPC0              	100.00%
Bootstrap support for G3JA43 as seed ortholog is 100%.
Bootstrap support for A3LPC0 as seed ortholog is 100%.

Group of orthologs #1874. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:197

G3J3W6              	100.00%		A3LW33              	100.00%
Bootstrap support for G3J3W6 as seed ortholog is 96%.
Bootstrap support for A3LW33 as seed ortholog is 100%.

Group of orthologs #1875. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JHN6              	100.00%		A3GF53              	100.00%
Bootstrap support for G3JHN6 as seed ortholog is 100%.
Bootstrap support for A3GF53 as seed ortholog is 100%.

Group of orthologs #1876. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:73

G3JA17              	100.00%		A3LU69              	100.00%
Bootstrap support for G3JA17 as seed ortholog is 100%.
Bootstrap support for A3LU69 as seed ortholog is 96%.

Group of orthologs #1877. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3J9U7              	100.00%		A3LWF0              	100.00%
Bootstrap support for G3J9U7 as seed ortholog is 100%.
Bootstrap support for A3LWF0 as seed ortholog is 100%.

Group of orthologs #1878. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JM39              	100.00%		A3LR09              	100.00%
Bootstrap support for G3JM39 as seed ortholog is 100%.
Bootstrap support for A3LR09 as seed ortholog is 100%.

Group of orthologs #1879. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JE38              	100.00%		A3M053              	100.00%
Bootstrap support for G3JE38 as seed ortholog is 100%.
Bootstrap support for A3M053 as seed ortholog is 100%.

Group of orthologs #1880. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JF27              	100.00%		A3LZC6              	100.00%
Bootstrap support for G3JF27 as seed ortholog is 100%.
Bootstrap support for A3LZC6 as seed ortholog is 100%.

Group of orthologs #1881. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JP73              	100.00%		A3LQ88              	100.00%
Bootstrap support for G3JP73 as seed ortholog is 100%.
Bootstrap support for A3LQ88 as seed ortholog is 100%.

Group of orthologs #1882. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 S.stipitis:197

G3JJT5              	100.00%		A3LZ79              	100.00%
Bootstrap support for G3JJT5 as seed ortholog is 100%.
Bootstrap support for A3LZ79 as seed ortholog is 100%.

Group of orthologs #1883. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:28

G3JCU0              	100.00%		A3LVV8              	100.00%
G3JDD0              	5.14%		
Bootstrap support for G3JCU0 as seed ortholog is 87%.
Bootstrap support for A3LVV8 as seed ortholog is 71%.
Alternative seed ortholog is A3LPW1 (28 bits away from this cluster)

Group of orthologs #1884. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:196

G3J5I2              	100.00%		A3GG02              	100.00%
Bootstrap support for G3J5I2 as seed ortholog is 99%.
Bootstrap support for A3GG02 as seed ortholog is 100%.

Group of orthologs #1885. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:13 S.stipitis:151

G3J4V6              	100.00%		A3LTY0              	100.00%
Bootstrap support for G3J4V6 as seed ortholog is 60%.
Alternative seed ortholog is G3JTJ9 (13 bits away from this cluster)
Bootstrap support for A3LTY0 as seed ortholog is 99%.

Group of orthologs #1886. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:196

G3JBS8              	100.00%		A3LP16              	100.00%
Bootstrap support for G3JBS8 as seed ortholog is 100%.
Bootstrap support for A3LP16 as seed ortholog is 100%.

Group of orthologs #1887. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:196

G3JAX2              	100.00%		A3LQU2              	100.00%
Bootstrap support for G3JAX2 as seed ortholog is 100%.
Bootstrap support for A3LQU2 as seed ortholog is 100%.

Group of orthologs #1888. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:196

G3JBK7              	100.00%		A3LWU2              	100.00%
Bootstrap support for G3JBK7 as seed ortholog is 100%.
Bootstrap support for A3LWU2 as seed ortholog is 100%.

Group of orthologs #1889. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:196

G3JQG4              	100.00%		A3LNU6              	100.00%
Bootstrap support for G3JQG4 as seed ortholog is 100%.
Bootstrap support for A3LNU6 as seed ortholog is 100%.

Group of orthologs #1890. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 S.stipitis:196

G3JUC5              	100.00%		A3GGG3              	100.00%
Bootstrap support for G3JUC5 as seed ortholog is 100%.
Bootstrap support for A3GGG3 as seed ortholog is 100%.

Group of orthologs #1891. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:141 S.stipitis:196

G3JNV7              	100.00%		A3M0A8              	100.00%
Bootstrap support for G3JNV7 as seed ortholog is 100%.
Bootstrap support for A3M0A8 as seed ortholog is 100%.

Group of orthologs #1892. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:52 S.stipitis:28

G3JPZ9              	100.00%		A3LZH2              	100.00%
Bootstrap support for G3JPZ9 as seed ortholog is 86%.
Bootstrap support for A3LZH2 as seed ortholog is 76%.

Group of orthologs #1893. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 S.stipitis:195

G3J8F2              	100.00%		A3GIA5              	100.00%
Bootstrap support for G3J8F2 as seed ortholog is 100%.
Bootstrap support for A3GIA5 as seed ortholog is 100%.

Group of orthologs #1894. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 S.stipitis:195

G3J695              	100.00%		A3LSJ0              	100.00%
Bootstrap support for G3J695 as seed ortholog is 100%.
Bootstrap support for A3LSJ0 as seed ortholog is 100%.

Group of orthologs #1895. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:112 S.stipitis:134

G3JBZ4              	100.00%		A3LNI6              	100.00%
Bootstrap support for G3JBZ4 as seed ortholog is 99%.
Bootstrap support for A3LNI6 as seed ortholog is 99%.

Group of orthologs #1896. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 S.stipitis:195

G3J661              	100.00%		A3LXS7              	100.00%
Bootstrap support for G3J661 as seed ortholog is 100%.
Bootstrap support for A3LXS7 as seed ortholog is 100%.

Group of orthologs #1897. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 S.stipitis:195

G3JJX7              	100.00%		A3LRC5              	100.00%
Bootstrap support for G3JJX7 as seed ortholog is 100%.
Bootstrap support for A3LRC5 as seed ortholog is 100%.

Group of orthologs #1898. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:195

G3JS60              	100.00%		A3GFL5              	100.00%
Bootstrap support for G3JS60 as seed ortholog is 99%.
Bootstrap support for A3GFL5 as seed ortholog is 100%.

Group of orthologs #1899. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 S.stipitis:195

G3JLD3              	100.00%		A3LSM2              	100.00%
Bootstrap support for G3JLD3 as seed ortholog is 100%.
Bootstrap support for A3LSM2 as seed ortholog is 100%.

Group of orthologs #1900. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:195

G3JTC0              	100.00%		A3LZM9              	100.00%
Bootstrap support for G3JTC0 as seed ortholog is 86%.
Bootstrap support for A3LZM9 as seed ortholog is 100%.

Group of orthologs #1901. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 S.stipitis:194

G3J3Z2              	100.00%		A3GHY4              	100.00%
Bootstrap support for G3J3Z2 as seed ortholog is 100%.
Bootstrap support for A3GHY4 as seed ortholog is 100%.

Group of orthologs #1902. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 S.stipitis:194

G3J6Q0              	100.00%		A3LTC4              	100.00%
Bootstrap support for G3J6Q0 as seed ortholog is 100%.
Bootstrap support for A3LTC4 as seed ortholog is 100%.

Group of orthologs #1903. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 S.stipitis:194

G3JKS9              	100.00%		A3LWT0              	100.00%
Bootstrap support for G3JKS9 as seed ortholog is 100%.
Bootstrap support for A3LWT0 as seed ortholog is 100%.

Group of orthologs #1904. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 S.stipitis:194

G3JQT0              	100.00%		A3LU66              	100.00%
Bootstrap support for G3JQT0 as seed ortholog is 100%.
Bootstrap support for A3LU66 as seed ortholog is 100%.

Group of orthologs #1905. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3J2S8              	100.00%		A3LR65              	100.00%
Bootstrap support for G3J2S8 as seed ortholog is 100%.
Bootstrap support for A3LR65 as seed ortholog is 100%.

Group of orthologs #1906. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3JD92              	100.00%		A3GFC5              	100.00%
Bootstrap support for G3JD92 as seed ortholog is 100%.
Bootstrap support for A3GFC5 as seed ortholog is 100%.

Group of orthologs #1907. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3JC59              	100.00%		A3LNI1              	100.00%
Bootstrap support for G3JC59 as seed ortholog is 100%.
Bootstrap support for A3LNI1 as seed ortholog is 100%.

Group of orthologs #1908. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3JED7              	100.00%		A3GH50              	100.00%
Bootstrap support for G3JED7 as seed ortholog is 100%.
Bootstrap support for A3GH50 as seed ortholog is 100%.

Group of orthologs #1909. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3JF23              	100.00%		A3LMT1              	100.00%
Bootstrap support for G3JF23 as seed ortholog is 100%.
Bootstrap support for A3LMT1 as seed ortholog is 100%.

Group of orthologs #1910. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3J8Q4              	100.00%		A3LW37              	100.00%
Bootstrap support for G3J8Q4 as seed ortholog is 100%.
Bootstrap support for A3LW37 as seed ortholog is 100%.

Group of orthologs #1911. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3J8W5              	100.00%		A3LZJ1              	100.00%
Bootstrap support for G3J8W5 as seed ortholog is 100%.
Bootstrap support for A3LZJ1 as seed ortholog is 100%.

Group of orthologs #1912. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3JP02              	100.00%		A3GGM6              	100.00%
Bootstrap support for G3JP02 as seed ortholog is 100%.
Bootstrap support for A3GGM6 as seed ortholog is 100%.

Group of orthologs #1913. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 S.stipitis:193

G3JT05              	100.00%		A3LUV2              	100.00%
Bootstrap support for G3JT05 as seed ortholog is 100%.
Bootstrap support for A3LUV2 as seed ortholog is 100%.

Group of orthologs #1914. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:105

G3JCR3              	100.00%		A3GF90              	100.00%
Bootstrap support for G3JCR3 as seed ortholog is 100%.
Bootstrap support for A3GF90 as seed ortholog is 99%.

Group of orthologs #1915. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:192

G3J906              	100.00%		A3LNB7              	100.00%
Bootstrap support for G3J906 as seed ortholog is 99%.
Bootstrap support for A3LNB7 as seed ortholog is 100%.

Group of orthologs #1916. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:192

G3JAK6              	100.00%		A3LQA7              	100.00%
Bootstrap support for G3JAK6 as seed ortholog is 100%.
Bootstrap support for A3LQA7 as seed ortholog is 100%.

Group of orthologs #1917. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:53

G3JFZ1              	100.00%		A3GFS5              	100.00%
Bootstrap support for G3JFZ1 as seed ortholog is 100%.
Bootstrap support for A3GFS5 as seed ortholog is 82%.

Group of orthologs #1918. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:192

G3J824              	100.00%		A3LYT8              	100.00%
Bootstrap support for G3J824 as seed ortholog is 100%.
Bootstrap support for A3LYT8 as seed ortholog is 100%.

Group of orthologs #1919. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:192

G3JHM6              	100.00%		A3LZ00              	100.00%
Bootstrap support for G3JHM6 as seed ortholog is 100%.
Bootstrap support for A3LZ00 as seed ortholog is 100%.

Group of orthologs #1920. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 S.stipitis:192

G3JI97              	100.00%		A3LZX2              	100.00%
Bootstrap support for G3JI97 as seed ortholog is 100%.
Bootstrap support for A3LZX2 as seed ortholog is 100%.

Group of orthologs #1921. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3J917              	100.00%		A3GG10              	100.00%
Bootstrap support for G3J917 as seed ortholog is 100%.
Bootstrap support for A3GG10 as seed ortholog is 100%.

Group of orthologs #1922. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3J683              	100.00%		A3LSN8              	100.00%
Bootstrap support for G3J683 as seed ortholog is 100%.
Bootstrap support for A3LSN8 as seed ortholog is 100%.

Group of orthologs #1923. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JD04              	100.00%		A3GGU2              	100.00%
Bootstrap support for G3JD04 as seed ortholog is 100%.
Bootstrap support for A3GGU2 as seed ortholog is 100%.

Group of orthologs #1924. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JEZ0              	100.00%		A3GHF6              	100.00%
Bootstrap support for G3JEZ0 as seed ortholog is 100%.
Bootstrap support for A3GHF6 as seed ortholog is 100%.

Group of orthologs #1925. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JAR8              	100.00%		A3LZU1              	100.00%
Bootstrap support for G3JAR8 as seed ortholog is 100%.
Bootstrap support for A3LZU1 as seed ortholog is 100%.

Group of orthologs #1926. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JMV0              	100.00%		A3LQC3              	100.00%
Bootstrap support for G3JMV0 as seed ortholog is 100%.
Bootstrap support for A3LQC3 as seed ortholog is 100%.

Group of orthologs #1927. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JTM7              	100.00%		A3GG38              	100.00%
Bootstrap support for G3JTM7 as seed ortholog is 100%.
Bootstrap support for A3GG38 as seed ortholog is 100%.

Group of orthologs #1928. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JK78              	100.00%		A3LZ89              	100.00%
Bootstrap support for G3JK78 as seed ortholog is 100%.
Bootstrap support for A3LZ89 as seed ortholog is 100%.

Group of orthologs #1929. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 S.stipitis:191

G3JUD6              	100.00%		A3LTH4              	100.00%
Bootstrap support for G3JUD6 as seed ortholog is 100%.
Bootstrap support for A3LTH4 as seed ortholog is 100%.

Group of orthologs #1930. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:190

G3J4Z9              	100.00%		A3LXL5              	100.00%
Bootstrap support for G3J4Z9 as seed ortholog is 100%.
Bootstrap support for A3LXL5 as seed ortholog is 100%.

Group of orthologs #1931. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:144

G3JGI7              	100.00%		A3LQX0              	100.00%
Bootstrap support for G3JGI7 as seed ortholog is 100%.
Bootstrap support for A3LQX0 as seed ortholog is 100%.

Group of orthologs #1932. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:190

G3J9B9              	100.00%		A3LZG2              	100.00%
Bootstrap support for G3J9B9 as seed ortholog is 100%.
Bootstrap support for A3LZG2 as seed ortholog is 100%.

Group of orthologs #1933. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:190

G3JDP3              	100.00%		A3LWQ0              	100.00%
Bootstrap support for G3JDP3 as seed ortholog is 100%.
Bootstrap support for A3LWQ0 as seed ortholog is 100%.

Group of orthologs #1934. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:190

G3JM67              	100.00%		A3LP73              	100.00%
Bootstrap support for G3JM67 as seed ortholog is 100%.
Bootstrap support for A3LP73 as seed ortholog is 100%.

Group of orthologs #1935. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:190

G3JLA4              	100.00%		A3LVJ2              	100.00%
Bootstrap support for G3JLA4 as seed ortholog is 100%.
Bootstrap support for A3LVJ2 as seed ortholog is 100%.

Group of orthologs #1936. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 S.stipitis:190

G3JLD8              	100.00%		A3LZG1              	100.00%
Bootstrap support for G3JLD8 as seed ortholog is 100%.
Bootstrap support for A3LZG1 as seed ortholog is 100%.

Group of orthologs #1937. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 S.stipitis:189

G3J713              	100.00%		A3LV02              	100.00%
Bootstrap support for G3J713 as seed ortholog is 100%.
Bootstrap support for A3LV02 as seed ortholog is 100%.

Group of orthologs #1938. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 S.stipitis:189

G3JGB7              	100.00%		A3LQ40              	100.00%
Bootstrap support for G3JGB7 as seed ortholog is 100%.
Bootstrap support for A3LQ40 as seed ortholog is 100%.

Group of orthologs #1939. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:189

G3JHU7              	100.00%		A3LU38              	100.00%
Bootstrap support for G3JHU7 as seed ortholog is 99%.
Bootstrap support for A3LU38 as seed ortholog is 100%.

Group of orthologs #1940. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 S.stipitis:189

G3JLN0              	100.00%		A3LSM0              	100.00%
Bootstrap support for G3JLN0 as seed ortholog is 100%.
Bootstrap support for A3LSM0 as seed ortholog is 100%.

Group of orthologs #1941. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:188

G3J4J9              	100.00%		A3LZ66              	100.00%
Bootstrap support for G3J4J9 as seed ortholog is 100%.
Bootstrap support for A3LZ66 as seed ortholog is 100%.

Group of orthologs #1942. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:188

G3J6J0              	100.00%		A3LXP5              	100.00%
Bootstrap support for G3J6J0 as seed ortholog is 100%.
Bootstrap support for A3LXP5 as seed ortholog is 100%.

Group of orthologs #1943. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:188

G3JL84              	100.00%		A3LSY0              	100.00%
Bootstrap support for G3JL84 as seed ortholog is 100%.
Bootstrap support for A3LSY0 as seed ortholog is 100%.

Group of orthologs #1944. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:188

G3JGG8              	100.00%		A3LYC2              	100.00%
Bootstrap support for G3JGG8 as seed ortholog is 100%.
Bootstrap support for A3LYC2 as seed ortholog is 100%.

Group of orthologs #1945. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:188

G3JUE3              	100.00%		A3LN59              	100.00%
Bootstrap support for G3JUE3 as seed ortholog is 100%.
Bootstrap support for A3LN59 as seed ortholog is 100%.

Group of orthologs #1946. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 S.stipitis:188

G3JPU5              	100.00%		A3LXD4              	100.00%
Bootstrap support for G3JPU5 as seed ortholog is 100%.
Bootstrap support for A3LXD4 as seed ortholog is 100%.

Group of orthologs #1947. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:187

G3J6B4              	100.00%		A3LNB6              	100.00%
Bootstrap support for G3J6B4 as seed ortholog is 100%.
Bootstrap support for A3LNB6 as seed ortholog is 100%.

Group of orthologs #1948. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:187

G3JC95              	100.00%		A3LQ17              	100.00%
Bootstrap support for G3JC95 as seed ortholog is 100%.
Bootstrap support for A3LQ17 as seed ortholog is 100%.

Group of orthologs #1949. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:187

G3JAF2              	100.00%		A3LWS5              	100.00%
Bootstrap support for G3JAF2 as seed ortholog is 100%.
Bootstrap support for A3LWS5 as seed ortholog is 100%.

Group of orthologs #1950. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:187

G3JPM2              	100.00%		A3GGC8              	100.00%
Bootstrap support for G3JPM2 as seed ortholog is 100%.
Bootstrap support for A3GGC8 as seed ortholog is 100%.

Group of orthologs #1951. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:187

G3JJ43              	100.00%		A3LSM1              	100.00%
Bootstrap support for G3JJ43 as seed ortholog is 100%.
Bootstrap support for A3LSM1 as seed ortholog is 100%.

Group of orthologs #1952. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 S.stipitis:54

G3JTR7              	100.00%		A3LPM9              	100.00%
Bootstrap support for G3JTR7 as seed ortholog is 100%.
Bootstrap support for A3LPM9 as seed ortholog is 93%.

Group of orthologs #1953. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:186

G3J8N8              	100.00%		A3LYZ7              	100.00%
G3JIN1              	38.58%		
Bootstrap support for G3J8N8 as seed ortholog is 100%.
Bootstrap support for A3LYZ7 as seed ortholog is 100%.

Group of orthologs #1954. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:29

G3J4N2              	100.00%		A3LNT9              	100.00%
Bootstrap support for G3J4N2 as seed ortholog is 94%.
Bootstrap support for A3LNT9 as seed ortholog is 77%.

Group of orthologs #1955. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:186

G3JCV9              	100.00%		A3GEY1              	100.00%
Bootstrap support for G3JCV9 as seed ortholog is 100%.
Bootstrap support for A3GEY1 as seed ortholog is 100%.

Group of orthologs #1956. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:186

G3J3B0              	100.00%		A3LYM4              	100.00%
Bootstrap support for G3J3B0 as seed ortholog is 100%.
Bootstrap support for A3LYM4 as seed ortholog is 100%.

Group of orthologs #1957. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:186

G3J7Z4              	100.00%		A3M0I4              	100.00%
Bootstrap support for G3J7Z4 as seed ortholog is 100%.
Bootstrap support for A3M0I4 as seed ortholog is 100%.

Group of orthologs #1958. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:186

G3JKI7              	100.00%		A3LPE3              	100.00%
Bootstrap support for G3JKI7 as seed ortholog is 100%.
Bootstrap support for A3LPE3 as seed ortholog is 100%.

Group of orthologs #1959. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:111

G3JN52              	100.00%		A3LPW7              	100.00%
Bootstrap support for G3JN52 as seed ortholog is 100%.
Bootstrap support for A3LPW7 as seed ortholog is 100%.

Group of orthologs #1960. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:186

G3JL16              	100.00%		A3LWX8              	100.00%
Bootstrap support for G3JL16 as seed ortholog is 100%.
Bootstrap support for A3LWX8 as seed ortholog is 100%.

Group of orthologs #1961. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 S.stipitis:113

G3JMG4              	100.00%		A3LVV2              	100.00%
Bootstrap support for G3JMG4 as seed ortholog is 100%.
Bootstrap support for A3LVV2 as seed ortholog is 98%.

Group of orthologs #1962. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 S.stipitis:185

G3J396              	100.00%		A3GFM5              	100.00%
Bootstrap support for G3J396 as seed ortholog is 100%.
Bootstrap support for A3GFM5 as seed ortholog is 100%.

Group of orthologs #1963. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 S.stipitis:185

G3JFF8              	100.00%		A3GEV2              	100.00%
Bootstrap support for G3JFF8 as seed ortholog is 100%.
Bootstrap support for A3GEV2 as seed ortholog is 100%.

Group of orthologs #1964. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 S.stipitis:185

G3JFS7              	100.00%		A3GHG8              	100.00%
Bootstrap support for G3JFS7 as seed ortholog is 100%.
Bootstrap support for A3GHG8 as seed ortholog is 100%.

Group of orthologs #1965. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 S.stipitis:185

G3JGY5              	100.00%		A3LU40              	100.00%
Bootstrap support for G3JGY5 as seed ortholog is 100%.
Bootstrap support for A3LU40 as seed ortholog is 100%.

Group of orthologs #1966. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:61

G3JHQ5              	100.00%		A3LVX1              	100.00%
Bootstrap support for G3JHQ5 as seed ortholog is 99%.
Bootstrap support for A3LVX1 as seed ortholog is 93%.

Group of orthologs #1967. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3J8M4              	100.00%		A3GI61              	100.00%
Bootstrap support for G3J8M4 as seed ortholog is 100%.
Bootstrap support for A3GI61 as seed ortholog is 100%.

Group of orthologs #1968. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3J852              	100.00%		A3LPD8              	100.00%
Bootstrap support for G3J852 as seed ortholog is 100%.
Bootstrap support for A3LPD8 as seed ortholog is 100%.

Group of orthologs #1969. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:184

G3JDE3              	100.00%		A3GI69              	100.00%
Bootstrap support for G3JDE3 as seed ortholog is 100%.
Bootstrap support for A3GI69 as seed ortholog is 100%.

Group of orthologs #1970. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3J9U9              	100.00%		A3LT14              	100.00%
Bootstrap support for G3J9U9 as seed ortholog is 100%.
Bootstrap support for A3LT14 as seed ortholog is 100%.

Group of orthologs #1971. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3JAU1              	100.00%		A3LYB6              	100.00%
Bootstrap support for G3JAU1 as seed ortholog is 100%.
Bootstrap support for A3LYB6 as seed ortholog is 100%.

Group of orthologs #1972. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3JEC0              	100.00%		A3LVR2              	100.00%
Bootstrap support for G3JEC0 as seed ortholog is 100%.
Bootstrap support for A3LVR2 as seed ortholog is 100%.

Group of orthologs #1973. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3JPY1              	100.00%		A3GFU8              	100.00%
Bootstrap support for G3JPY1 as seed ortholog is 100%.
Bootstrap support for A3GFU8 as seed ortholog is 100%.

Group of orthologs #1974. Best score 184 bits
Score difference with first non-orthologous sequence - C.militaris:184 S.stipitis:184

G3JQF3              	100.00%		A3GGQ3              	100.00%
Bootstrap support for G3JQF3 as seed ortholog is 100%.
Bootstrap support for A3GGQ3 as seed ortholog is 100%.

Group of orthologs #1975. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:183

G3JDY8              	100.00%		A3GI12              	100.00%
Bootstrap support for G3JDY8 as seed ortholog is 100%.
Bootstrap support for A3GI12 as seed ortholog is 100%.

Group of orthologs #1976. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:183

G3J8R4              	100.00%		A3LUI2              	100.00%
Bootstrap support for G3J8R4 as seed ortholog is 100%.
Bootstrap support for A3LUI2 as seed ortholog is 100%.

Group of orthologs #1977. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:183

G3JCP5              	100.00%		A3LRD6              	100.00%
Bootstrap support for G3JCP5 as seed ortholog is 100%.
Bootstrap support for A3LRD6 as seed ortholog is 100%.

Group of orthologs #1978. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:183

G3JER1              	100.00%		A3LPX6              	100.00%
Bootstrap support for G3JER1 as seed ortholog is 99%.
Bootstrap support for A3LPX6 as seed ortholog is 100%.

Group of orthologs #1979. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:183

G3J6H4              	100.00%		A3M0H3              	100.00%
Bootstrap support for G3J6H4 as seed ortholog is 100%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #1980. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:66

G3JJP4              	100.00%		A3LPX0              	100.00%
Bootstrap support for G3JJP4 as seed ortholog is 97%.
Bootstrap support for A3LPX0 as seed ortholog is 99%.

Group of orthologs #1981. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:183

G3JI94              	100.00%		A3LRU4              	100.00%
Bootstrap support for G3JI94 as seed ortholog is 100%.
Bootstrap support for A3LRU4 as seed ortholog is 100%.

Group of orthologs #1982. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 S.stipitis:17

G3JPG1              	100.00%		A3GI42              	100.00%
Bootstrap support for G3JPG1 as seed ortholog is 100%.
Bootstrap support for A3GI42 as seed ortholog is 59%.
Alternative seed ortholog is A3GGH6 (17 bits away from this cluster)

Group of orthologs #1983. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:111

G3JQI1              	100.00%		A3LY37              	100.00%
Bootstrap support for G3JQI1 as seed ortholog is 96%.
Bootstrap support for A3LY37 as seed ortholog is 99%.

Group of orthologs #1984. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:182

G3J8V4              	100.00%		A3GEW1              	100.00%
Bootstrap support for G3J8V4 as seed ortholog is 100%.
Bootstrap support for A3GEW1 as seed ortholog is 100%.

Group of orthologs #1985. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:182

G3J8Y3              	100.00%		A3LT57              	100.00%
Bootstrap support for G3J8Y3 as seed ortholog is 100%.
Bootstrap support for A3LT57 as seed ortholog is 100%.

Group of orthologs #1986. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:36

G3J6M1              	100.00%		A3LWJ3              	100.00%
Bootstrap support for G3J6M1 as seed ortholog is 99%.
Bootstrap support for A3LWJ3 as seed ortholog is 86%.

Group of orthologs #1987. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:182

G3JBU3              	100.00%		A3LUD6              	100.00%
Bootstrap support for G3JBU3 as seed ortholog is 100%.
Bootstrap support for A3LUD6 as seed ortholog is 100%.

Group of orthologs #1988. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:182

G3JHS1              	100.00%		A3LQ64              	100.00%
Bootstrap support for G3JHS1 as seed ortholog is 100%.
Bootstrap support for A3LQ64 as seed ortholog is 100%.

Group of orthologs #1989. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:182

G3JSK5              	100.00%		A3GH24              	100.00%
Bootstrap support for G3JSK5 as seed ortholog is 100%.
Bootstrap support for A3GH24 as seed ortholog is 100%.

Group of orthologs #1990. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 S.stipitis:182

G3JHM9              	100.00%		A3LX65              	100.00%
Bootstrap support for G3JHM9 as seed ortholog is 100%.
Bootstrap support for A3LX65 as seed ortholog is 100%.

Group of orthologs #1991. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:181

G3JHY6              	100.00%		A3GFI7              	100.00%
Bootstrap support for G3JHY6 as seed ortholog is 100%.
Bootstrap support for A3GFI7 as seed ortholog is 100%.

Group of orthologs #1992. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:7

G3J8T2              	100.00%		A3LUW2              	100.00%
Bootstrap support for G3J8T2 as seed ortholog is 100%.
Bootstrap support for A3LUW2 as seed ortholog is 61%.
Alternative seed ortholog is A3GFQ6 (7 bits away from this cluster)

Group of orthologs #1993. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:181

G3JER0              	100.00%		A3LPW8              	100.00%
Bootstrap support for G3JER0 as seed ortholog is 100%.
Bootstrap support for A3LPW8 as seed ortholog is 100%.

Group of orthologs #1994. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:181

G3J866              	100.00%		A3LWV6              	100.00%
Bootstrap support for G3J866 as seed ortholog is 100%.
Bootstrap support for A3LWV6 as seed ortholog is 100%.

Group of orthologs #1995. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:181

G3JDN9              	100.00%		A3LSF9              	100.00%
Bootstrap support for G3JDN9 as seed ortholog is 100%.
Bootstrap support for A3LSF9 as seed ortholog is 100%.

Group of orthologs #1996. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:181

G3JMV1              	100.00%		A3GGD4              	100.00%
Bootstrap support for G3JMV1 as seed ortholog is 100%.
Bootstrap support for A3GGD4 as seed ortholog is 100%.

Group of orthologs #1997. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 S.stipitis:181

G3JJ11              	100.00%		A3LX38              	100.00%
Bootstrap support for G3JJ11 as seed ortholog is 100%.
Bootstrap support for A3LX38 as seed ortholog is 100%.

Group of orthologs #1998. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:113

G3JKP4              	100.00%		A3LZ09              	100.00%
Bootstrap support for G3JKP4 as seed ortholog is 94%.
Bootstrap support for A3LZ09 as seed ortholog is 99%.

Group of orthologs #1999. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3JCT5              	100.00%		A3GH34              	100.00%
Bootstrap support for G3JCT5 as seed ortholog is 100%.
Bootstrap support for A3GH34 as seed ortholog is 100%.

Group of orthologs #2000. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3JBK1              	100.00%		A3LRB3              	100.00%
Bootstrap support for G3JBK1 as seed ortholog is 100%.
Bootstrap support for A3LRB3 as seed ortholog is 100%.

Group of orthologs #2001. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3J875              	100.00%		A3LUS1              	100.00%
Bootstrap support for G3J875 as seed ortholog is 100%.
Bootstrap support for A3LUS1 as seed ortholog is 100%.

Group of orthologs #2002. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:180

G3J4I4              	100.00%		A3LZ35              	100.00%
Bootstrap support for G3J4I4 as seed ortholog is 99%.
Bootstrap support for A3LZ35 as seed ortholog is 100%.

Group of orthologs #2003. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3J9Y7              	100.00%		A3LUZ3              	100.00%
Bootstrap support for G3J9Y7 as seed ortholog is 100%.
Bootstrap support for A3LUZ3 as seed ortholog is 100%.

Group of orthologs #2004. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3JAT8              	100.00%		A3LVR8              	100.00%
Bootstrap support for G3JAT8 as seed ortholog is 100%.
Bootstrap support for A3LVR8 as seed ortholog is 100%.

Group of orthologs #2005. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:97

G3JKE2              	100.00%		A3LN95              	100.00%
Bootstrap support for G3JKE2 as seed ortholog is 100%.
Bootstrap support for A3LN95 as seed ortholog is 39%.
Alternative seed ortholog is A3LQ28 (97 bits away from this cluster)

Group of orthologs #2006. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3JA19              	100.00%		A3M062              	100.00%
Bootstrap support for G3JA19 as seed ortholog is 100%.
Bootstrap support for A3M062 as seed ortholog is 100%.

Group of orthologs #2007. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3JCY0              	100.00%		A3LYP2              	100.00%
Bootstrap support for G3JCY0 as seed ortholog is 100%.
Bootstrap support for A3LYP2 as seed ortholog is 100%.

Group of orthologs #2008. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 S.stipitis:180

G3JFZ0              	100.00%		A3M0P2              	100.00%
Bootstrap support for G3JFZ0 as seed ortholog is 100%.
Bootstrap support for A3M0P2 as seed ortholog is 100%.

Group of orthologs #2009. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3J402              	100.00%		A3GGM2              	100.00%
Bootstrap support for G3J402 as seed ortholog is 100%.
Bootstrap support for A3GGM2 as seed ortholog is 100%.

Group of orthologs #2010. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3J330              	100.00%		A3GHY7              	100.00%
Bootstrap support for G3J330 as seed ortholog is 100%.
Bootstrap support for A3GHY7 as seed ortholog is 100%.

Group of orthologs #2011. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3J4P1              	100.00%		A3GHD1              	100.00%
Bootstrap support for G3J4P1 as seed ortholog is 100%.
Bootstrap support for A3GHD1 as seed ortholog is 100%.

Group of orthologs #2012. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3J458              	100.00%		A3LS90              	100.00%
Bootstrap support for G3J458 as seed ortholog is 100%.
Bootstrap support for A3LS90 as seed ortholog is 100%.

Group of orthologs #2013. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3J8Y6              	100.00%		A3LWJ9              	100.00%
Bootstrap support for G3J8Y6 as seed ortholog is 100%.
Bootstrap support for A3LWJ9 as seed ortholog is 100%.

Group of orthologs #2014. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3JD96              	100.00%		A3LVK6              	100.00%
Bootstrap support for G3JD96 as seed ortholog is 100%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #2015. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3JCT8              	100.00%		A3LWR9              	100.00%
Bootstrap support for G3JCT8 as seed ortholog is 100%.
Bootstrap support for A3LWR9 as seed ortholog is 100%.

Group of orthologs #2016. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3JQE3              	100.00%		A3LQG3              	100.00%
Bootstrap support for G3JQE3 as seed ortholog is 100%.
Bootstrap support for A3LQG3 as seed ortholog is 100%.

Group of orthologs #2017. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 S.stipitis:179

G3JTF0              	100.00%		A3LXS1              	100.00%
Bootstrap support for G3JTF0 as seed ortholog is 100%.
Bootstrap support for A3LXS1 as seed ortholog is 100%.

Group of orthologs #2018. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3JF17              	100.00%		A3LQ20              	100.00%
G3J4S3              	16.14%		A3LN10              	29.55%
Bootstrap support for G3JF17 as seed ortholog is 100%.
Bootstrap support for A3LQ20 as seed ortholog is 100%.

Group of orthologs #2019. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3J3R0              	100.00%		A3LW63              	100.00%
Bootstrap support for G3J3R0 as seed ortholog is 100%.
Bootstrap support for A3LW63 as seed ortholog is 100%.

Group of orthologs #2020. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3JEK4              	100.00%		A3LNI0              	100.00%
Bootstrap support for G3JEK4 as seed ortholog is 100%.
Bootstrap support for A3LNI0 as seed ortholog is 100%.

Group of orthologs #2021. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3JFN5              	100.00%		A3GI98              	100.00%
Bootstrap support for G3JFN5 as seed ortholog is 100%.
Bootstrap support for A3GI98 as seed ortholog is 100%.

Group of orthologs #2022. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3JAL2              	100.00%		A3LT10              	100.00%
Bootstrap support for G3JAL2 as seed ortholog is 100%.
Bootstrap support for A3LT10 as seed ortholog is 100%.

Group of orthologs #2023. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:111

G3J4Q4              	100.00%		A3LZX8              	100.00%
Bootstrap support for G3J4Q4 as seed ortholog is 100%.
Bootstrap support for A3LZX8 as seed ortholog is 99%.

Group of orthologs #2024. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3JHY9              	100.00%		A3LRG0              	100.00%
Bootstrap support for G3JHY9 as seed ortholog is 100%.
Bootstrap support for A3LRG0 as seed ortholog is 100%.

Group of orthologs #2025. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 S.stipitis:178

G3JIX6              	100.00%		A3LXG0              	100.00%
Bootstrap support for G3JIX6 as seed ortholog is 100%.
Bootstrap support for A3LXG0 as seed ortholog is 100%.

Group of orthologs #2026. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:178

G3JMJ1              	100.00%		A3LYV7              	100.00%
Bootstrap support for G3JMJ1 as seed ortholog is 99%.
Bootstrap support for A3LYV7 as seed ortholog is 100%.

Group of orthologs #2027. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 S.stipitis:177

G3J8Y1              	100.00%		A3GHH8              	100.00%
Bootstrap support for G3J8Y1 as seed ortholog is 100%.
Bootstrap support for A3GHH8 as seed ortholog is 100%.

Group of orthologs #2028. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 S.stipitis:177

G3J6D1              	100.00%		A3LRS5              	100.00%
Bootstrap support for G3J6D1 as seed ortholog is 100%.
Bootstrap support for A3LRS5 as seed ortholog is 100%.

Group of orthologs #2029. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 S.stipitis:177

G3J741              	100.00%		A3LV52              	100.00%
Bootstrap support for G3J741 as seed ortholog is 100%.
Bootstrap support for A3LV52 as seed ortholog is 100%.

Group of orthologs #2030. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 S.stipitis:176

G3J6C5              	100.00%		A3LRZ3              	100.00%
Bootstrap support for G3J6C5 as seed ortholog is 100%.
Bootstrap support for A3LRZ3 as seed ortholog is 100%.

Group of orthologs #2031. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:133

G3J6X9              	100.00%		A3LUE8              	100.00%
Bootstrap support for G3J6X9 as seed ortholog is 99%.
Bootstrap support for A3LUE8 as seed ortholog is 99%.

Group of orthologs #2032. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 S.stipitis:176

G3JF22              	100.00%		A3GIA8              	100.00%
Bootstrap support for G3JF22 as seed ortholog is 100%.
Bootstrap support for A3GIA8 as seed ortholog is 100%.

Group of orthologs #2033. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:98

G3JHP2              	100.00%		A3GHH9              	100.00%
Bootstrap support for G3JHP2 as seed ortholog is 97%.
Bootstrap support for A3GHH9 as seed ortholog is 99%.

Group of orthologs #2034. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 S.stipitis:176

G3JFF3              	100.00%		A3LV47              	100.00%
Bootstrap support for G3JFF3 as seed ortholog is 100%.
Bootstrap support for A3LV47 as seed ortholog is 100%.

Group of orthologs #2035. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 S.stipitis:176

G3JG47              	100.00%		A3LVI9              	100.00%
Bootstrap support for G3JG47 as seed ortholog is 100%.
Bootstrap support for A3LVI9 as seed ortholog is 100%.

Group of orthologs #2036. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 S.stipitis:176

G3JCW9              	100.00%		A3LZQ7              	100.00%
Bootstrap support for G3JCW9 as seed ortholog is 100%.
Bootstrap support for A3LZQ7 as seed ortholog is 100%.

Group of orthologs #2037. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3J736              	100.00%		A3LSC1              	100.00%
Bootstrap support for G3J736 as seed ortholog is 100%.
Bootstrap support for A3LSC1 as seed ortholog is 100%.

Group of orthologs #2038. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JIF4              	100.00%		A3GHS2              	100.00%
Bootstrap support for G3JIF4 as seed ortholog is 100%.
Bootstrap support for A3GHS2 as seed ortholog is 100%.

Group of orthologs #2039. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JHC7              	100.00%		A3LRM2              	100.00%
Bootstrap support for G3JHC7 as seed ortholog is 100%.
Bootstrap support for A3LRM2 as seed ortholog is 100%.

Group of orthologs #2040. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JBC7              	100.00%		A3M0L2              	100.00%
Bootstrap support for G3JBC7 as seed ortholog is 100%.
Bootstrap support for A3M0L2 as seed ortholog is 100%.

Group of orthologs #2041. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JG55              	100.00%		A3LX45              	100.00%
Bootstrap support for G3JG55 as seed ortholog is 100%.
Bootstrap support for A3LX45 as seed ortholog is 100%.

Group of orthologs #2042. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JS89              	100.00%		A3LNJ3              	100.00%
Bootstrap support for G3JS89 as seed ortholog is 100%.
Bootstrap support for A3LNJ3 as seed ortholog is 100%.

Group of orthologs #2043. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JLY2              	100.00%		A3LVN3              	100.00%
Bootstrap support for G3JLY2 as seed ortholog is 100%.
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #2044. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 S.stipitis:175

G3JQT2              	100.00%		A3LT89              	100.00%
Bootstrap support for G3JQT2 as seed ortholog is 100%.
Bootstrap support for A3LT89 as seed ortholog is 100%.

Group of orthologs #2045. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:174

G3JCR2              	100.00%		A3GG03              	100.00%
Bootstrap support for G3JCR2 as seed ortholog is 100%.
Bootstrap support for A3GG03 as seed ortholog is 100%.

Group of orthologs #2046. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:174

G3JKD8              	100.00%		A3LQI8              	100.00%
Bootstrap support for G3JKD8 as seed ortholog is 100%.
Bootstrap support for A3LQI8 as seed ortholog is 100%.

Group of orthologs #2047. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:174

G3JI92              	100.00%		A3LYE4              	100.00%
Bootstrap support for G3JI92 as seed ortholog is 100%.
Bootstrap support for A3LYE4 as seed ortholog is 100%.

Group of orthologs #2048. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:174

G3JS77              	100.00%		A3LPE6              	100.00%
Bootstrap support for G3JS77 as seed ortholog is 100%.
Bootstrap support for A3LPE6 as seed ortholog is 100%.

Group of orthologs #2049. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:174

G3JN13              	100.00%		A3LY58              	100.00%
Bootstrap support for G3JN13 as seed ortholog is 100%.
Bootstrap support for A3LY58 as seed ortholog is 100%.

Group of orthologs #2050. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 S.stipitis:174

G3JQQ7              	100.00%		A3LY67              	100.00%
Bootstrap support for G3JQQ7 as seed ortholog is 100%.
Bootstrap support for A3LY67 as seed ortholog is 100%.

Group of orthologs #2051. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JKQ7              	100.00%		A3LTI1              	100.00%
G3JS19              	13.53%		
Bootstrap support for G3JKQ7 as seed ortholog is 100%.
Bootstrap support for A3LTI1 as seed ortholog is 100%.

Group of orthologs #2052. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3J763              	100.00%		A3GG45              	100.00%
Bootstrap support for G3J763 as seed ortholog is 100%.
Bootstrap support for A3GG45 as seed ortholog is 100%.

Group of orthologs #2053. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JC99              	100.00%		A3LNF0              	100.00%
Bootstrap support for G3JC99 as seed ortholog is 100%.
Bootstrap support for A3LNF0 as seed ortholog is 100%.

Group of orthologs #2054. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3J359              	100.00%		A3LZ78              	100.00%
Bootstrap support for G3J359 as seed ortholog is 100%.
Bootstrap support for A3LZ78 as seed ortholog is 100%.

Group of orthologs #2055. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JHU6              	100.00%		A3GGS2              	100.00%
Bootstrap support for G3JHU6 as seed ortholog is 100%.
Bootstrap support for A3GGS2 as seed ortholog is 100%.

Group of orthologs #2056. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JHP4              	100.00%		A3GI03              	100.00%
Bootstrap support for G3JHP4 as seed ortholog is 100%.
Bootstrap support for A3GI03 as seed ortholog is 100%.

Group of orthologs #2057. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:102

G3J6Q2              	100.00%		A3LZR4              	100.00%
Bootstrap support for G3J6Q2 as seed ortholog is 100%.
Bootstrap support for A3LZR4 as seed ortholog is 99%.

Group of orthologs #2058. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JBT3              	100.00%		A3LVA9              	100.00%
Bootstrap support for G3JBT3 as seed ortholog is 100%.
Bootstrap support for A3LVA9 as seed ortholog is 100%.

Group of orthologs #2059. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:53

G3JMU3              	100.00%		A3GGI2              	100.00%
Bootstrap support for G3JMU3 as seed ortholog is 99%.
Bootstrap support for A3GGI2 as seed ortholog is 95%.

Group of orthologs #2060. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JM53              	100.00%		A3LX30              	100.00%
Bootstrap support for G3JM53 as seed ortholog is 100%.
Bootstrap support for A3LX30 as seed ortholog is 100%.

Group of orthologs #2061. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 S.stipitis:173

G3JNV4              	100.00%		A3LZZ5              	100.00%
Bootstrap support for G3JNV4 as seed ortholog is 100%.
Bootstrap support for A3LZZ5 as seed ortholog is 100%.

Group of orthologs #2062. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 S.stipitis:172

G3JL64              	100.00%		A3GH11              	100.00%
G3J3F6              	24.84%		
Bootstrap support for G3JL64 as seed ortholog is 100%.
Bootstrap support for A3GH11 as seed ortholog is 100%.

Group of orthologs #2063. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 S.stipitis:172

G3J486              	100.00%		A3LP13              	100.00%
Bootstrap support for G3J486 as seed ortholog is 100%.
Bootstrap support for A3LP13 as seed ortholog is 100%.

Group of orthologs #2064. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 S.stipitis:120

G3J6U3              	100.00%		A3LQV3              	100.00%
Bootstrap support for G3J6U3 as seed ortholog is 100%.
Bootstrap support for A3LQV3 as seed ortholog is 100%.

Group of orthologs #2065. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 S.stipitis:172

G3JE19              	100.00%		A3GGZ1              	100.00%
Bootstrap support for G3JE19 as seed ortholog is 100%.
Bootstrap support for A3GGZ1 as seed ortholog is 100%.

Group of orthologs #2066. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 S.stipitis:172

G3J3B9              	100.00%		A3M020              	100.00%
Bootstrap support for G3J3B9 as seed ortholog is 100%.
Bootstrap support for A3M020 as seed ortholog is 100%.

Group of orthologs #2067. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 S.stipitis:172

G3JNF3              	100.00%		A3GHL7              	100.00%
Bootstrap support for G3JNF3 as seed ortholog is 100%.
Bootstrap support for A3GHL7 as seed ortholog is 100%.

Group of orthologs #2068. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3J9Q1              	100.00%		A3LTR5              	100.00%
                    	       		A3GHL6              	44.70%
                    	       		A3LS46              	44.12%
Bootstrap support for G3J9Q1 as seed ortholog is 100%.
Bootstrap support for A3LTR5 as seed ortholog is 100%.

Group of orthologs #2069. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3J313              	100.00%		A3GGF9              	100.00%
Bootstrap support for G3J313 as seed ortholog is 100%.
Bootstrap support for A3GGF9 as seed ortholog is 100%.

Group of orthologs #2070. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:47

G3J528              	100.00%		A3LSM9              	100.00%
Bootstrap support for G3J528 as seed ortholog is 100%.
Bootstrap support for A3LSM9 as seed ortholog is 93%.

Group of orthologs #2071. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3JHE2              	100.00%		A3GGL0              	100.00%
Bootstrap support for G3JHE2 as seed ortholog is 100%.
Bootstrap support for A3GGL0 as seed ortholog is 100%.

Group of orthologs #2072. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3JPC0              	100.00%		A3GFM3              	100.00%
Bootstrap support for G3JPC0 as seed ortholog is 100%.
Bootstrap support for A3GFM3 as seed ortholog is 100%.

Group of orthologs #2073. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3JFE0              	100.00%		A3LV45              	100.00%
Bootstrap support for G3JFE0 as seed ortholog is 100%.
Bootstrap support for A3LV45 as seed ortholog is 100%.

Group of orthologs #2074. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3JNC6              	100.00%		A3LZH3              	100.00%
Bootstrap support for G3JNC6 as seed ortholog is 100%.
Bootstrap support for A3LZH3 as seed ortholog is 100%.

Group of orthologs #2075. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 S.stipitis:171

G3JTW8              	100.00%		A3LVC5              	100.00%
Bootstrap support for G3JTW8 as seed ortholog is 100%.
Bootstrap support for A3LVC5 as seed ortholog is 100%.

Group of orthologs #2076. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:170

G3JNM3              	100.00%		A3GG48              	100.00%
                    	       		A3GG47              	23.27%
Bootstrap support for G3JNM3 as seed ortholog is 93%.
Bootstrap support for A3GG48 as seed ortholog is 100%.

Group of orthologs #2077. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 S.stipitis:170

G3JBS6              	100.00%		A3GFL9              	100.00%
Bootstrap support for G3JBS6 as seed ortholog is 100%.
Bootstrap support for A3GFL9 as seed ortholog is 100%.

Group of orthologs #2078. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:170

G3J9H0              	100.00%		A3LTN1              	100.00%
Bootstrap support for G3J9H0 as seed ortholog is 88%.
Bootstrap support for A3LTN1 as seed ortholog is 100%.

Group of orthologs #2079. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 S.stipitis:170

G3JJ03              	100.00%		A3LMZ2              	100.00%
Bootstrap support for G3JJ03 as seed ortholog is 100%.
Bootstrap support for A3LMZ2 as seed ortholog is 100%.

Group of orthologs #2080. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 S.stipitis:170

G3JM97              	100.00%		A3LQ80              	100.00%
Bootstrap support for G3JM97 as seed ortholog is 100%.
Bootstrap support for A3LQ80 as seed ortholog is 100%.

Group of orthologs #2081. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 S.stipitis:170

G3JPY2              	100.00%		A3LNK7              	100.00%
Bootstrap support for G3JPY2 as seed ortholog is 100%.
Bootstrap support for A3LNK7 as seed ortholog is 100%.

Group of orthologs #2082. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 S.stipitis:170

G3JQA5              	100.00%		A3LQM2              	100.00%
Bootstrap support for G3JQA5 as seed ortholog is 100%.
Bootstrap support for A3LQM2 as seed ortholog is 100%.

Group of orthologs #2083. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JCK6              	100.00%		A3GG25              	100.00%
G3J9I2              	100.00%		A3LZD9              	100.00%
Bootstrap support for G3JCK6 as seed ortholog is 100%.
Bootstrap support for G3J9I2 as seed ortholog is 100%.
Bootstrap support for A3GG25 as seed ortholog is 100%.
Bootstrap support for A3LZD9 as seed ortholog is 100%.

Group of orthologs #2084. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JE71              	100.00%		A3LS29              	100.00%
Bootstrap support for G3JE71 as seed ortholog is 100%.
Bootstrap support for A3LS29 as seed ortholog is 100%.

Group of orthologs #2085. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JGQ9              	100.00%		A3LQD0              	100.00%
Bootstrap support for G3JGQ9 as seed ortholog is 100%.
Bootstrap support for A3LQD0 as seed ortholog is 100%.

Group of orthologs #2086. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JJA4              	100.00%		A3LNI8              	100.00%
Bootstrap support for G3JJA4 as seed ortholog is 100%.
Bootstrap support for A3LNI8 as seed ortholog is 100%.

Group of orthologs #2087. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JK05              	100.00%		A3LQU1              	100.00%
Bootstrap support for G3JK05 as seed ortholog is 100%.
Bootstrap support for A3LQU1 as seed ortholog is 100%.

Group of orthologs #2088. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JPL0              	100.00%		A3LQK7              	100.00%
Bootstrap support for G3JPL0 as seed ortholog is 100%.
Bootstrap support for A3LQK7 as seed ortholog is 100%.

Group of orthologs #2089. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JNS6              	100.00%		A3LWQ7              	100.00%
Bootstrap support for G3JNS6 as seed ortholog is 100%.
Bootstrap support for A3LWQ7 as seed ortholog is 100%.

Group of orthologs #2090. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JUC7              	100.00%		A3LU63              	100.00%
Bootstrap support for G3JUC7 as seed ortholog is 100%.
Bootstrap support for A3LU63 as seed ortholog is 100%.

Group of orthologs #2091. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 S.stipitis:169

G3JUC6              	100.00%		A3LY61              	100.00%
Bootstrap support for G3JUC6 as seed ortholog is 100%.
Bootstrap support for A3LY61 as seed ortholog is 100%.

Group of orthologs #2092. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3JEZ1              	100.00%		A3GFZ8              	100.00%
                    	       		A3LVI6              	7.42%
Bootstrap support for G3JEZ1 as seed ortholog is 100%.
Bootstrap support for A3GFZ8 as seed ortholog is 100%.

Group of orthologs #2093. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3J761              	100.00%		A3LN46              	100.00%
Bootstrap support for G3J761 as seed ortholog is 100%.
Bootstrap support for A3LN46 as seed ortholog is 100%.

Group of orthologs #2094. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3J7P5              	100.00%		A3LMS3              	100.00%
Bootstrap support for G3J7P5 as seed ortholog is 100%.
Bootstrap support for A3LMS3 as seed ortholog is 100%.

Group of orthologs #2095. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:25

G3J6Y9              	100.00%		A3LQG0              	100.00%
Bootstrap support for G3J6Y9 as seed ortholog is 100%.
Bootstrap support for A3LQG0 as seed ortholog is 78%.

Group of orthologs #2096. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3J4G3              	100.00%		A3LTX8              	100.00%
Bootstrap support for G3J4G3 as seed ortholog is 100%.
Bootstrap support for A3LTX8 as seed ortholog is 100%.

Group of orthologs #2097. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:168

G3JED8              	100.00%		A3LMR8              	100.00%
Bootstrap support for G3JED8 as seed ortholog is 99%.
Bootstrap support for A3LMR8 as seed ortholog is 100%.

Group of orthologs #2098. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3J7F4              	100.00%		A3LVV6              	100.00%
Bootstrap support for G3J7F4 as seed ortholog is 100%.
Bootstrap support for A3LVV6 as seed ortholog is 100%.

Group of orthologs #2099. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3J9T2              	100.00%		A3M0L7              	100.00%
Bootstrap support for G3J9T2 as seed ortholog is 100%.
Bootstrap support for A3M0L7 as seed ortholog is 100%.

Group of orthologs #2100. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:168

G3JP67              	100.00%		A3LP69              	100.00%
Bootstrap support for G3JP67 as seed ortholog is 95%.
Bootstrap support for A3LP69 as seed ortholog is 100%.

Group of orthologs #2101. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 S.stipitis:168

G3JK53              	100.00%		A3LTX1              	100.00%
Bootstrap support for G3JK53 as seed ortholog is 100%.
Bootstrap support for A3LTX1 as seed ortholog is 100%.

Group of orthologs #2102. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3J8R6              	100.00%		A3GG92              	100.00%
Bootstrap support for G3J8R6 as seed ortholog is 100%.
Bootstrap support for A3GG92 as seed ortholog is 100%.

Group of orthologs #2103. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3J5K8              	100.00%		A3LST6              	100.00%
Bootstrap support for G3J5K8 as seed ortholog is 100%.
Bootstrap support for A3LST6 as seed ortholog is 100%.

Group of orthologs #2104. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3JEB8              	100.00%		A3GHF4              	100.00%
Bootstrap support for G3JEB8 as seed ortholog is 100%.
Bootstrap support for A3GHF4 as seed ortholog is 100%.

Group of orthologs #2105. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3J596              	100.00%		A3LZI5              	100.00%
Bootstrap support for G3J596 as seed ortholog is 100%.
Bootstrap support for A3LZI5 as seed ortholog is 100%.

Group of orthologs #2106. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3JCF5              	100.00%		A3LSU0              	100.00%
Bootstrap support for G3JCF5 as seed ortholog is 100%.
Bootstrap support for A3LSU0 as seed ortholog is 100%.

Group of orthologs #2107. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3JJE4              	100.00%		A3GGJ1              	100.00%
Bootstrap support for G3JJE4 as seed ortholog is 100%.
Bootstrap support for A3GGJ1 as seed ortholog is 100%.

Group of orthologs #2108. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3JH95              	100.00%		A3LNN9              	100.00%
Bootstrap support for G3JH95 as seed ortholog is 100%.
Bootstrap support for A3LNN9 as seed ortholog is 100%.

Group of orthologs #2109. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 S.stipitis:167

G3JKS2              	100.00%		A3LTY8              	100.00%
Bootstrap support for G3JKS2 as seed ortholog is 100%.
Bootstrap support for A3LTY8 as seed ortholog is 100%.

Group of orthologs #2110. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:167

G3JUU1              	100.00%		A3LWS1              	100.00%
Bootstrap support for G3JUU1 as seed ortholog is 100%.
Bootstrap support for A3LWS1 as seed ortholog is 100%.

Group of orthologs #2111. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3J466              	100.00%		A3LXQ6              	100.00%
Bootstrap support for G3J466 as seed ortholog is 100%.
Bootstrap support for A3LXQ6 as seed ortholog is 100%.

Group of orthologs #2112. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3JI67              	100.00%		A3GGS3              	100.00%
Bootstrap support for G3JI67 as seed ortholog is 100%.
Bootstrap support for A3GGS3 as seed ortholog is 100%.

Group of orthologs #2113. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:18

G3JDH4              	100.00%		A3LVN8              	100.00%
Bootstrap support for G3JDH4 as seed ortholog is 99%.
Bootstrap support for A3LVN8 as seed ortholog is 74%.
Alternative seed ortholog is A3LYJ9 (18 bits away from this cluster)

Group of orthologs #2114. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3JC16              	100.00%		A3LZU8              	100.00%
Bootstrap support for G3JC16 as seed ortholog is 100%.
Bootstrap support for A3LZU8 as seed ortholog is 100%.

Group of orthologs #2115. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3JIS0              	100.00%		A3LTK9              	100.00%
Bootstrap support for G3JIS0 as seed ortholog is 100%.
Bootstrap support for A3LTK9 as seed ortholog is 100%.

Group of orthologs #2116. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3JHC5              	100.00%		A3LV58              	100.00%
Bootstrap support for G3JHC5 as seed ortholog is 100%.
Bootstrap support for A3LV58 as seed ortholog is 100%.

Group of orthologs #2117. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3JQN8              	100.00%		A3LV61              	100.00%
Bootstrap support for G3JQN8 as seed ortholog is 100%.
Bootstrap support for A3LV61 as seed ortholog is 100%.

Group of orthologs #2118. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 S.stipitis:166

G3JUB2              	100.00%		A3LV31              	100.00%
Bootstrap support for G3JUB2 as seed ortholog is 100%.
Bootstrap support for A3LV31 as seed ortholog is 100%.

Group of orthologs #2119. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:165

G3JCH3              	100.00%		A3LSH1              	100.00%
                    	       		A3GG06              	7.00%
Bootstrap support for G3JCH3 as seed ortholog is 99%.
Bootstrap support for A3LSH1 as seed ortholog is 100%.

Group of orthologs #2120. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JNL7              	100.00%		A3LXA6              	100.00%
                    	       		A3LXA7              	58.25%
Bootstrap support for G3JNL7 as seed ortholog is 100%.
Bootstrap support for A3LXA6 as seed ortholog is 100%.

Group of orthologs #2121. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3J2T7              	100.00%		A3LNH4              	100.00%
Bootstrap support for G3J2T7 as seed ortholog is 100%.
Bootstrap support for A3LNH4 as seed ortholog is 100%.

Group of orthologs #2122. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JD80              	100.00%		A3GF48              	100.00%
Bootstrap support for G3JD80 as seed ortholog is 100%.
Bootstrap support for A3GF48 as seed ortholog is 100%.

Group of orthologs #2123. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3J6N8              	100.00%		A3LRE1              	100.00%
Bootstrap support for G3J6N8 as seed ortholog is 100%.
Bootstrap support for A3LRE1 as seed ortholog is 100%.

Group of orthologs #2124. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JHC6              	100.00%		A3GG52              	100.00%
Bootstrap support for G3JHC6 as seed ortholog is 100%.
Bootstrap support for A3GG52 as seed ortholog is 100%.

Group of orthologs #2125. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JCZ3              	100.00%		A3LTT9              	100.00%
Bootstrap support for G3JCZ3 as seed ortholog is 100%.
Bootstrap support for A3LTT9 as seed ortholog is 100%.

Group of orthologs #2126. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JLM8              	100.00%		A3GHS1              	100.00%
Bootstrap support for G3JLM8 as seed ortholog is 100%.
Bootstrap support for A3GHS1 as seed ortholog is 100%.

Group of orthologs #2127. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JIQ3              	100.00%		A3LQS9              	100.00%
Bootstrap support for G3JIQ3 as seed ortholog is 100%.
Bootstrap support for A3LQS9 as seed ortholog is 100%.

Group of orthologs #2128. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:47

G3JHX2              	100.00%		A3LU35              	100.00%
Bootstrap support for G3JHX2 as seed ortholog is 100%.
Bootstrap support for A3LU35 as seed ortholog is 97%.

Group of orthologs #2129. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JQT4              	100.00%		A3GHA8              	100.00%
Bootstrap support for G3JQT4 as seed ortholog is 100%.
Bootstrap support for A3GHA8 as seed ortholog is 100%.

Group of orthologs #2130. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JQC0              	100.00%		A3LTX7              	100.00%
Bootstrap support for G3JQC0 as seed ortholog is 100%.
Bootstrap support for A3LTX7 as seed ortholog is 100%.

Group of orthologs #2131. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 S.stipitis:165

G3JMA1              	100.00%		A3LZL2              	100.00%
Bootstrap support for G3JMA1 as seed ortholog is 100%.
Bootstrap support for A3LZL2 as seed ortholog is 100%.

Group of orthologs #2132. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:22 S.stipitis:46

G3JK30              	100.00%		A3LX80              	100.00%
                    	       		A3LWP0              	16.63%
                    	       		A3LWN9              	11.39%
Bootstrap support for G3JK30 as seed ortholog is 70%.
Alternative seed ortholog is G3JCU9 (22 bits away from this cluster)
Bootstrap support for A3LX80 as seed ortholog is 86%.

Group of orthologs #2133. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:38 S.stipitis:164

G3JNS7              	100.00%		A3LU22              	100.00%
                    	       		A3GHM2              	41.02%
Bootstrap support for G3JNS7 as seed ortholog is 80%.
Bootstrap support for A3LU22 as seed ortholog is 100%.

Group of orthologs #2134. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 S.stipitis:164

G3J8G3              	100.00%		A3GHC5              	100.00%
Bootstrap support for G3J8G3 as seed ortholog is 100%.
Bootstrap support for A3GHC5 as seed ortholog is 100%.

Group of orthologs #2135. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 S.stipitis:164

G3J9L6              	100.00%		A3LXP1              	100.00%
Bootstrap support for G3J9L6 as seed ortholog is 100%.
Bootstrap support for A3LXP1 as seed ortholog is 100%.

Group of orthologs #2136. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 S.stipitis:164

G3JKF5              	100.00%		A3LPG0              	100.00%
Bootstrap support for G3JKF5 as seed ortholog is 100%.
Bootstrap support for A3LPG0 as seed ortholog is 100%.

Group of orthologs #2137. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 S.stipitis:164

G3JEM1              	100.00%		A3LWT3              	100.00%
Bootstrap support for G3JEM1 as seed ortholog is 100%.
Bootstrap support for A3LWT3 as seed ortholog is 100%.

Group of orthologs #2138. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 S.stipitis:164

G3JSZ2              	100.00%		A3LNL6              	100.00%
Bootstrap support for G3JSZ2 as seed ortholog is 100%.
Bootstrap support for A3LNL6 as seed ortholog is 100%.

Group of orthologs #2139. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 S.stipitis:164

G3JQ97              	100.00%		A3LWH1              	100.00%
Bootstrap support for G3JQ97 as seed ortholog is 100%.
Bootstrap support for A3LWH1 as seed ortholog is 100%.

Group of orthologs #2140. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:47 S.stipitis:101

G3JB95              	100.00%		A3GG56              	100.00%
G3JG40              	100.00%		A3LP96              	100.00%
G3J633              	7.97%		A3GG54              	100.00%
                    	       		A3LS62              	27.37%
                    	       		A3GFP0              	21.91%
Bootstrap support for G3JB95 as seed ortholog is 79%.
Bootstrap support for G3JG40 as seed ortholog is 71%.
Alternative seed ortholog is G3J7D6 (47 bits away from this cluster)
Bootstrap support for A3GG56 as seed ortholog is 94%.
Bootstrap support for A3LP96 as seed ortholog is 94%.
Bootstrap support for A3GG54 as seed ortholog is 93%.

Group of orthologs #2141. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JA69              	100.00%		A3LR35              	100.00%
Bootstrap support for G3JA69 as seed ortholog is 100%.
Bootstrap support for A3LR35 as seed ortholog is 100%.

Group of orthologs #2142. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JIS8              	100.00%		A3GFW2              	100.00%
Bootstrap support for G3JIS8 as seed ortholog is 100%.
Bootstrap support for A3GFW2 as seed ortholog is 100%.

Group of orthologs #2143. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JAF9              	100.00%		A3LXB3              	100.00%
Bootstrap support for G3JAF9 as seed ortholog is 100%.
Bootstrap support for A3LXB3 as seed ortholog is 100%.

Group of orthologs #2144. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JH81              	100.00%		A3LU58              	100.00%
Bootstrap support for G3JH81 as seed ortholog is 100%.
Bootstrap support for A3LU58 as seed ortholog is 100%.

Group of orthologs #2145. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JJ34              	100.00%		A3LUA1              	100.00%
Bootstrap support for G3JJ34 as seed ortholog is 100%.
Bootstrap support for A3LUA1 as seed ortholog is 100%.

Group of orthologs #2146. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JUQ2              	100.00%		A3GFL2              	100.00%
Bootstrap support for G3JUQ2 as seed ortholog is 100%.
Bootstrap support for A3GFL2 as seed ortholog is 100%.

Group of orthologs #2147. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JLF3              	100.00%		A3LVG9              	100.00%
Bootstrap support for G3JLF3 as seed ortholog is 100%.
Bootstrap support for A3LVG9 as seed ortholog is 100%.

Group of orthologs #2148. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JQ50              	100.00%		A3LS02              	100.00%
Bootstrap support for G3JQ50 as seed ortholog is 100%.
Bootstrap support for A3LS02 as seed ortholog is 100%.

Group of orthologs #2149. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 S.stipitis:163

G3JTG4              	100.00%		A3LNY7              	100.00%
Bootstrap support for G3JTG4 as seed ortholog is 100%.
Bootstrap support for A3LNY7 as seed ortholog is 100%.

Group of orthologs #2150. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 S.stipitis:162

G3J3W2              	100.00%		A3LYW0              	100.00%
Bootstrap support for G3J3W2 as seed ortholog is 100%.
Bootstrap support for A3LYW0 as seed ortholog is 100%.

Group of orthologs #2151. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:162

G3J3U3              	100.00%		A3M0K2              	100.00%
Bootstrap support for G3J3U3 as seed ortholog is 100%.
Bootstrap support for A3M0K2 as seed ortholog is 100%.

Group of orthologs #2152. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 S.stipitis:162

G3JL20              	100.00%		A3GFV7              	100.00%
Bootstrap support for G3JL20 as seed ortholog is 100%.
Bootstrap support for A3GFV7 as seed ortholog is 100%.

Group of orthologs #2153. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 S.stipitis:162

G3JI84              	100.00%		A3LVF5              	100.00%
Bootstrap support for G3JI84 as seed ortholog is 100%.
Bootstrap support for A3LVF5 as seed ortholog is 100%.

Group of orthologs #2154. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 S.stipitis:162

G3JR70              	100.00%		A3LNJ7              	100.00%
Bootstrap support for G3JR70 as seed ortholog is 100%.
Bootstrap support for A3LNJ7 as seed ortholog is 100%.

Group of orthologs #2155. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:162

G3JHZ5              	100.00%		A3LZ70              	100.00%
Bootstrap support for G3JHZ5 as seed ortholog is 99%.
Bootstrap support for A3LZ70 as seed ortholog is 100%.

Group of orthologs #2156. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 S.stipitis:162

G3JQT3              	100.00%		A3LRE4              	100.00%
Bootstrap support for G3JQT3 as seed ortholog is 100%.
Bootstrap support for A3LRE4 as seed ortholog is 100%.

Group of orthologs #2157. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JAN0              	100.00%		A3LQI3              	100.00%
G3J5L9              	10.27%		
Bootstrap support for G3JAN0 as seed ortholog is 100%.
Bootstrap support for A3LQI3 as seed ortholog is 100%.

Group of orthologs #2158. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3J3B7              	100.00%		A3GHK4              	100.00%
Bootstrap support for G3J3B7 as seed ortholog is 100%.
Bootstrap support for A3GHK4 as seed ortholog is 100%.

Group of orthologs #2159. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3J5K9              	100.00%		A3GG32              	100.00%
Bootstrap support for G3J5K9 as seed ortholog is 100%.
Bootstrap support for A3GG32 as seed ortholog is 100%.

Group of orthologs #2160. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:80

G3J817              	100.00%		A3GEU0              	100.00%
Bootstrap support for G3J817 as seed ortholog is 100%.
Bootstrap support for A3GEU0 as seed ortholog is 92%.

Group of orthologs #2161. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3J9H7              	100.00%		A3GH43              	100.00%
Bootstrap support for G3J9H7 as seed ortholog is 100%.
Bootstrap support for A3GH43 as seed ortholog is 100%.

Group of orthologs #2162. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3J3N4              	100.00%		A3LU08              	100.00%
Bootstrap support for G3J3N4 as seed ortholog is 100%.
Bootstrap support for A3LU08 as seed ortholog is 100%.

Group of orthologs #2163. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JDD2              	100.00%		A3GFI3              	100.00%
Bootstrap support for G3JDD2 as seed ortholog is 100%.
Bootstrap support for A3GFI3 as seed ortholog is 100%.

Group of orthologs #2164. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JE69              	100.00%		A3LPU4              	100.00%
Bootstrap support for G3JE69 as seed ortholog is 100%.
Bootstrap support for A3LPU4 as seed ortholog is 100%.

Group of orthologs #2165. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3J882              	100.00%		A3LXN3              	100.00%
Bootstrap support for G3J882 as seed ortholog is 100%.
Bootstrap support for A3LXN3 as seed ortholog is 100%.

Group of orthologs #2166. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JEZ7              	100.00%		A3LQZ5              	100.00%
Bootstrap support for G3JEZ7 as seed ortholog is 100%.
Bootstrap support for A3LQZ5 as seed ortholog is 100%.

Group of orthologs #2167. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JK63              	100.00%		A3LR30              	100.00%
Bootstrap support for G3JK63 as seed ortholog is 100%.
Bootstrap support for A3LR30 as seed ortholog is 100%.

Group of orthologs #2168. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JK24              	100.00%		A3LRJ5              	100.00%
Bootstrap support for G3JK24 as seed ortholog is 100%.
Bootstrap support for A3LRJ5 as seed ortholog is 100%.

Group of orthologs #2169. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JIF1              	100.00%		A3LXE9              	100.00%
Bootstrap support for G3JIF1 as seed ortholog is 100%.
Bootstrap support for A3LXE9 as seed ortholog is 100%.

Group of orthologs #2170. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:94

G3JIP5              	100.00%		A3LXB1              	100.00%
Bootstrap support for G3JIP5 as seed ortholog is 99%.
Bootstrap support for A3LXB1 as seed ortholog is 99%.

Group of orthologs #2171. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JLE7              	100.00%		A3LZR9              	100.00%
Bootstrap support for G3JLE7 as seed ortholog is 100%.
Bootstrap support for A3LZR9 as seed ortholog is 100%.

Group of orthologs #2172. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JPW9              	100.00%		A3LXF7              	100.00%
Bootstrap support for G3JPW9 as seed ortholog is 100%.
Bootstrap support for A3LXF7 as seed ortholog is 100%.

Group of orthologs #2173. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:161

G3JTY0              	100.00%		A3LTY7              	100.00%
Bootstrap support for G3JTY0 as seed ortholog is 93%.
Bootstrap support for A3LTY7 as seed ortholog is 100%.

Group of orthologs #2174. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JSH9              	100.00%		A3LWE0              	100.00%
Bootstrap support for G3JSH9 as seed ortholog is 100%.
Bootstrap support for A3LWE0 as seed ortholog is 100%.

Group of orthologs #2175. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 S.stipitis:161

G3JPZ0              	100.00%		A3LZW3              	100.00%
Bootstrap support for G3JPZ0 as seed ortholog is 100%.
Bootstrap support for A3LZW3 as seed ortholog is 100%.

Group of orthologs #2176. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:160

G3J7E7              	100.00%		A3LQS5              	100.00%
Bootstrap support for G3J7E7 as seed ortholog is 100%.
Bootstrap support for A3LQS5 as seed ortholog is 100%.

Group of orthologs #2177. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:28

G3J356              	100.00%		A3M0M8              	100.00%
Bootstrap support for G3J356 as seed ortholog is 100%.
Bootstrap support for A3M0M8 as seed ortholog is 72%.
Alternative seed ortholog is A3LU30 (28 bits away from this cluster)

Group of orthologs #2178. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:160

G3JCZ2              	100.00%		A3LVI0              	100.00%
Bootstrap support for G3JCZ2 as seed ortholog is 100%.
Bootstrap support for A3LVI0 as seed ortholog is 100%.

Group of orthologs #2179. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:160

G3J9W0              	100.00%		O13393              	100.00%
Bootstrap support for G3J9W0 as seed ortholog is 100%.
Bootstrap support for O13393 as seed ortholog is 100%.

Group of orthologs #2180. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:160

G3JNZ5              	100.00%		A3GI95              	100.00%
Bootstrap support for G3JNZ5 as seed ortholog is 100%.
Bootstrap support for A3GI95 as seed ortholog is 100%.

Group of orthologs #2181. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 S.stipitis:160

G3JLV2              	100.00%		A3LZ08              	100.00%
Bootstrap support for G3JLV2 as seed ortholog is 100%.
Bootstrap support for A3LZ08 as seed ortholog is 100%.

Group of orthologs #2182. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:25 S.stipitis:159

G3JS40              	100.00%		A3LQ58              	100.00%
G3J8T4              	8.49%		
G3J8H4              	7.16%		
G3JB00              	6.50%		
Bootstrap support for G3JS40 as seed ortholog is 44%.
Alternative seed ortholog is G3JMT4 (25 bits away from this cluster)
Bootstrap support for A3LQ58 as seed ortholog is 100%.

Group of orthologs #2183. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:64

G3J3V0              	100.00%		A3LQW1              	100.00%
Bootstrap support for G3J3V0 as seed ortholog is 100%.
Bootstrap support for A3LQW1 as seed ortholog is 99%.

Group of orthologs #2184. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:159

G3J8S3              	100.00%		A3LSE6              	100.00%
Bootstrap support for G3J8S3 as seed ortholog is 100%.
Bootstrap support for A3LSE6 as seed ortholog is 100%.

Group of orthologs #2185. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:159

G3JA01              	100.00%		A3LR81              	100.00%
Bootstrap support for G3JA01 as seed ortholog is 100%.
Bootstrap support for A3LR81 as seed ortholog is 100%.

Group of orthologs #2186. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:159

G3JDC1              	100.00%		A3LTG0              	100.00%
Bootstrap support for G3JDC1 as seed ortholog is 100%.
Bootstrap support for A3LTG0 as seed ortholog is 100%.

Group of orthologs #2187. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 S.stipitis:159

G3JU63              	100.00%		A3LVA1              	100.00%
Bootstrap support for G3JU63 as seed ortholog is 100%.
Bootstrap support for A3LVA1 as seed ortholog is 100%.

Group of orthologs #2188. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:42

G3JM64              	100.00%		A3GEV7              	100.00%
G3JF31              	6.11%		
Bootstrap support for G3JM64 as seed ortholog is 100%.
Bootstrap support for A3GEV7 as seed ortholog is 75%.

Group of orthologs #2189. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JKN7              	100.00%		A3LYN4              	100.00%
                    	       		A3LYP4              	5.75%
Bootstrap support for G3JKN7 as seed ortholog is 100%.
Bootstrap support for A3LYN4 as seed ortholog is 100%.

Group of orthologs #2190. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3J6Z0              	100.00%		A3GH16              	100.00%
Bootstrap support for G3J6Z0 as seed ortholog is 100%.
Bootstrap support for A3GH16 as seed ortholog is 100%.

Group of orthologs #2191. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3J8H5              	100.00%		A3LN22              	100.00%
Bootstrap support for G3J8H5 as seed ortholog is 100%.
Bootstrap support for A3LN22 as seed ortholog is 100%.

Group of orthologs #2192. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JHB7              	100.00%		A3GFA6              	100.00%
Bootstrap support for G3JHB7 as seed ortholog is 100%.
Bootstrap support for A3GFA6 as seed ortholog is 100%.

Group of orthologs #2193. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:28

G3JG48              	100.00%		A3GHG6              	100.00%
Bootstrap support for G3JG48 as seed ortholog is 100%.
Bootstrap support for A3GHG6 as seed ortholog is 74%.
Alternative seed ortholog is A3LZ71 (28 bits away from this cluster)

Group of orthologs #2194. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JFU4              	100.00%		A3LPB7              	100.00%
Bootstrap support for G3JFU4 as seed ortholog is 100%.
Bootstrap support for A3LPB7 as seed ortholog is 100%.

Group of orthologs #2195. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:12 S.stipitis:60

G3JHG3              	100.00%		A3LNP4              	100.00%
Bootstrap support for G3JHG3 as seed ortholog is 56%.
Alternative seed ortholog is G3JLX4 (12 bits away from this cluster)
Bootstrap support for A3LNP4 as seed ortholog is 63%.
Alternative seed ortholog is A3GFJ6 (60 bits away from this cluster)

Group of orthologs #2196. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JBQ7              	100.00%		A3LZC5              	100.00%
Bootstrap support for G3JBQ7 as seed ortholog is 100%.
Bootstrap support for A3LZC5 as seed ortholog is 100%.

Group of orthologs #2197. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JK60              	100.00%		A3LRT4              	100.00%
Bootstrap support for G3JK60 as seed ortholog is 100%.
Bootstrap support for A3LRT4 as seed ortholog is 100%.

Group of orthologs #2198. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JM71              	100.00%		A3LQI4              	100.00%
Bootstrap support for G3JM71 as seed ortholog is 100%.
Bootstrap support for A3LQI4 as seed ortholog is 100%.

Group of orthologs #2199. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:38 S.stipitis:158

G3JQE0              	100.00%		A3LPV1              	100.00%
Bootstrap support for G3JQE0 as seed ortholog is 88%.
Bootstrap support for A3LPV1 as seed ortholog is 100%.

Group of orthologs #2200. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 S.stipitis:158

G3JTN0              	100.00%		A3GI54              	100.00%
Bootstrap support for G3JTN0 as seed ortholog is 100%.
Bootstrap support for A3GI54 as seed ortholog is 100%.

Group of orthologs #2201. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:7 S.stipitis:157

G3JEA9              	100.00%		A3LSU3              	100.00%
                    	       		A3LQR0              	9.90%
Bootstrap support for G3JEA9 as seed ortholog is 56%.
Alternative seed ortholog is G3JH07 (7 bits away from this cluster)
Bootstrap support for A3LSU3 as seed ortholog is 100%.

Group of orthologs #2202. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 S.stipitis:157

G3JF55              	100.00%		A3LQY1              	100.00%
Bootstrap support for G3JF55 as seed ortholog is 100%.
Bootstrap support for A3LQY1 as seed ortholog is 100%.

Group of orthologs #2203. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3JC69              	100.00%		A3GEW2              	100.00%
Bootstrap support for G3JC69 as seed ortholog is 100%.
Bootstrap support for A3GEW2 as seed ortholog is 100%.

Group of orthologs #2204. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3J5N5              	100.00%		A3LYJ1              	100.00%
Bootstrap support for G3J5N5 as seed ortholog is 100%.
Bootstrap support for A3LYJ1 as seed ortholog is 100%.

Group of orthologs #2205. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3JJT8              	100.00%		A3LNY4              	100.00%
Bootstrap support for G3JJT8 as seed ortholog is 100%.
Bootstrap support for A3LNY4 as seed ortholog is 100%.

Group of orthologs #2206. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3JEL1              	100.00%		A3LYZ6              	100.00%
Bootstrap support for G3JEL1 as seed ortholog is 100%.
Bootstrap support for A3LYZ6 as seed ortholog is 100%.

Group of orthologs #2207. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:84

G3JLZ5              	100.00%		A3LRK3              	100.00%
Bootstrap support for G3JLZ5 as seed ortholog is 97%.
Bootstrap support for A3LRK3 as seed ortholog is 99%.

Group of orthologs #2208. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3JM59              	100.00%		A3LVE1              	100.00%
Bootstrap support for G3JM59 as seed ortholog is 100%.
Bootstrap support for A3LVE1 as seed ortholog is 100%.

Group of orthologs #2209. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3JJS3              	100.00%		A3M0A0              	100.00%
Bootstrap support for G3JJS3 as seed ortholog is 100%.
Bootstrap support for A3M0A0 as seed ortholog is 100%.

Group of orthologs #2210. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 S.stipitis:156

G3JR53              	100.00%		A3LZJ7              	100.00%
Bootstrap support for G3JR53 as seed ortholog is 100%.
Bootstrap support for A3LZJ7 as seed ortholog is 100%.

Group of orthologs #2211. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:155

G3JQK3              	100.00%		A3LSD2              	100.00%
G3J8V1              	100.00%		A3LQR8              	100.00%
G3JIT2              	32.14%		A3LZU9              	21.79%
G3JNZ9              	20.63%		
Bootstrap support for G3JQK3 as seed ortholog is 99%.
Bootstrap support for G3J8V1 as seed ortholog is 99%.
Bootstrap support for A3LSD2 as seed ortholog is 100%.
Bootstrap support for A3LQR8 as seed ortholog is 100%.

Group of orthologs #2212. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3J8C3              	100.00%		A3LXS0              	100.00%
                    	       		A3LPZ1              	8.32%
Bootstrap support for G3J8C3 as seed ortholog is 100%.
Bootstrap support for A3LXS0 as seed ortholog is 100%.

Group of orthologs #2213. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:107

G3J6U2              	100.00%		A3GFT7              	100.00%
Bootstrap support for G3J6U2 as seed ortholog is 100%.
Bootstrap support for A3GFT7 as seed ortholog is 99%.

Group of orthologs #2214. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3J8M9              	100.00%		A3LNC9              	100.00%
Bootstrap support for G3J8M9 as seed ortholog is 100%.
Bootstrap support for A3LNC9 as seed ortholog is 100%.

Group of orthologs #2215. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3J5M5              	100.00%		A3LVF6              	100.00%
Bootstrap support for G3J5M5 as seed ortholog is 100%.
Bootstrap support for A3LVF6 as seed ortholog is 100%.

Group of orthologs #2216. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3JD69              	100.00%		A3LSG6              	100.00%
Bootstrap support for G3JD69 as seed ortholog is 100%.
Bootstrap support for A3LSG6 as seed ortholog is 100%.

Group of orthologs #2217. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3JN23              	100.00%		A3GHN3              	100.00%
Bootstrap support for G3JN23 as seed ortholog is 100%.
Bootstrap support for A3GHN3 as seed ortholog is 100%.

Group of orthologs #2218. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3JKH2              	100.00%		A3LXR3              	100.00%
Bootstrap support for G3JKH2 as seed ortholog is 100%.
Bootstrap support for A3LXR3 as seed ortholog is 100%.

Group of orthologs #2219. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 S.stipitis:155

G3JRQ8              	100.00%		A3LZE1              	100.00%
Bootstrap support for G3JRQ8 as seed ortholog is 100%.
Bootstrap support for A3LZE1 as seed ortholog is 100%.

Group of orthologs #2220. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JR84              	100.00%		A3LPI3              	100.00%
                    	       		A3LY09              	7.22%
Bootstrap support for G3JR84 as seed ortholog is 100%.
Bootstrap support for A3LPI3 as seed ortholog is 100%.

Group of orthologs #2221. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3J3V2              	100.00%		A3LUC9              	100.00%
Bootstrap support for G3J3V2 as seed ortholog is 100%.
Bootstrap support for A3LUC9 as seed ortholog is 100%.

Group of orthologs #2222. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3J735              	100.00%		A3LT42              	100.00%
Bootstrap support for G3J735 as seed ortholog is 100%.
Bootstrap support for A3LT42 as seed ortholog is 100%.

Group of orthologs #2223. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3J5J9              	100.00%		A3LYD7              	100.00%
Bootstrap support for G3J5J9 as seed ortholog is 100%.
Bootstrap support for A3LYD7 as seed ortholog is 100%.

Group of orthologs #2224. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3J5V6              	100.00%		A3M0A9              	100.00%
Bootstrap support for G3J5V6 as seed ortholog is 100%.
Bootstrap support for A3M0A9 as seed ortholog is 100%.

Group of orthologs #2225. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3J809              	100.00%		A3LYB8              	100.00%
Bootstrap support for G3J809 as seed ortholog is 100%.
Bootstrap support for A3LYB8 as seed ortholog is 100%.

Group of orthologs #2226. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JIL3              	100.00%		A3LPR4              	100.00%
Bootstrap support for G3JIL3 as seed ortholog is 100%.
Bootstrap support for A3LPR4 as seed ortholog is 100%.

Group of orthologs #2227. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JIE1              	100.00%		A3LRX8              	100.00%
Bootstrap support for G3JIE1 as seed ortholog is 100%.
Bootstrap support for A3LRX8 as seed ortholog is 100%.

Group of orthologs #2228. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JLT6              	100.00%		A3LRC0              	100.00%
Bootstrap support for G3JLT6 as seed ortholog is 100%.
Bootstrap support for A3LRC0 as seed ortholog is 100%.

Group of orthologs #2229. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JLI8              	100.00%		A3LT51              	100.00%
Bootstrap support for G3JLI8 as seed ortholog is 100%.
Bootstrap support for A3LT51 as seed ortholog is 100%.

Group of orthologs #2230. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JKH8              	100.00%		A3LX88              	100.00%
Bootstrap support for G3JKH8 as seed ortholog is 100%.
Bootstrap support for A3LX88 as seed ortholog is 100%.

Group of orthologs #2231. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 S.stipitis:154

G3JUK5              	100.00%		A3LRK6              	100.00%
Bootstrap support for G3JUK5 as seed ortholog is 100%.
Bootstrap support for A3LRK6 as seed ortholog is 100%.

Group of orthologs #2232. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:154

G3JRH5              	100.00%		A3M0F3              	100.00%
Bootstrap support for G3JRH5 as seed ortholog is 98%.
Bootstrap support for A3M0F3 as seed ortholog is 100%.

Group of orthologs #2233. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:72

G3JL44              	100.00%		A3GGK4              	100.00%
                    	       		A3LTP1              	11.76%
Bootstrap support for G3JL44 as seed ortholog is 100%.
Bootstrap support for A3GGK4 as seed ortholog is 96%.

Group of orthologs #2234. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3JRC3              	100.00%		A3GHU6              	100.00%
                    	       		A3LWA9              	15.00%
Bootstrap support for G3JRC3 as seed ortholog is 100%.
Bootstrap support for A3GHU6 as seed ortholog is 100%.

Group of orthologs #2235. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3J8Q5              	100.00%		A3LRI9              	100.00%
Bootstrap support for G3J8Q5 as seed ortholog is 100%.
Bootstrap support for A3LRI9 as seed ortholog is 100%.

Group of orthologs #2236. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3JHB1              	100.00%		A3GFN2              	100.00%
Bootstrap support for G3JHB1 as seed ortholog is 100%.
Bootstrap support for A3GFN2 as seed ortholog is 100%.

Group of orthologs #2237. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3JHN4              	100.00%		A3LPH8              	100.00%
Bootstrap support for G3JHN4 as seed ortholog is 100%.
Bootstrap support for A3LPH8 as seed ortholog is 100%.

Group of orthologs #2238. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3JED9              	100.00%		A3LUD2              	100.00%
Bootstrap support for G3JED9 as seed ortholog is 100%.
Bootstrap support for A3LUD2 as seed ortholog is 100%.

Group of orthologs #2239. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3JEU7              	100.00%		A3LVU7              	100.00%
Bootstrap support for G3JEU7 as seed ortholog is 100%.
Bootstrap support for A3LVU7 as seed ortholog is 100%.

Group of orthologs #2240. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:153

G3JH03              	100.00%		A3LXF6              	100.00%
Bootstrap support for G3JH03 as seed ortholog is 99%.
Bootstrap support for A3LXF6 as seed ortholog is 100%.

Group of orthologs #2241. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 S.stipitis:153

G3JMW5              	100.00%		A3LRR2              	100.00%
Bootstrap support for G3JMW5 as seed ortholog is 100%.
Bootstrap support for A3LRR2 as seed ortholog is 100%.

Group of orthologs #2242. Best score 152 bits
Score difference with first non-orthologous sequence - C.militaris:152 S.stipitis:152

G3J5M9              	100.00%		A3GHI4              	100.00%
Bootstrap support for G3J5M9 as seed ortholog is 100%.
Bootstrap support for A3GHI4 as seed ortholog is 100%.

Group of orthologs #2243. Best score 152 bits
Score difference with first non-orthologous sequence - C.militaris:152 S.stipitis:152

G3J9Z8              	100.00%		A3LNU7              	100.00%
Bootstrap support for G3J9Z8 as seed ortholog is 100%.
Bootstrap support for A3LNU7 as seed ortholog is 100%.

Group of orthologs #2244. Best score 152 bits
Score difference with first non-orthologous sequence - C.militaris:152 S.stipitis:152

G3J6Z5              	100.00%		A3LW93              	100.00%
Bootstrap support for G3J6Z5 as seed ortholog is 100%.
Bootstrap support for A3LW93 as seed ortholog is 100%.

Group of orthologs #2245. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3JE70              	100.00%		A3LQU9              	100.00%
                    	       		A3LS28              	65.34%
                    	       		A3LS27              	35.49%
                    	       		A3LS26              	33.17%
Bootstrap support for G3JE70 as seed ortholog is 100%.
Bootstrap support for A3LQU9 as seed ortholog is 100%.

Group of orthologs #2246. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3J6B7              	100.00%		A3GFR4              	100.00%
Bootstrap support for G3J6B7 as seed ortholog is 100%.
Bootstrap support for A3GFR4 as seed ortholog is 100%.

Group of orthologs #2247. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:151

G3J365              	100.00%		A3LQ56              	100.00%
Bootstrap support for G3J365 as seed ortholog is 99%.
Bootstrap support for A3LQ56 as seed ortholog is 100%.

Group of orthologs #2248. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3JAC6              	100.00%		A3LQS4              	100.00%
Bootstrap support for G3JAC6 as seed ortholog is 100%.
Bootstrap support for A3LQS4 as seed ortholog is 100%.

Group of orthologs #2249. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3J3Y6              	100.00%		A3LX96              	100.00%
Bootstrap support for G3J3Y6 as seed ortholog is 100%.
Bootstrap support for A3LX96 as seed ortholog is 100%.

Group of orthologs #2250. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3J853              	100.00%		A3LTC6              	100.00%
Bootstrap support for G3J853 as seed ortholog is 100%.
Bootstrap support for A3LTC6 as seed ortholog is 100%.

Group of orthologs #2251. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3JDY1              	100.00%		A3LT60              	100.00%
Bootstrap support for G3JDY1 as seed ortholog is 100%.
Bootstrap support for A3LT60 as seed ortholog is 100%.

Group of orthologs #2252. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:54

G3JQ43              	100.00%		A3GFM4              	100.00%
Bootstrap support for G3JQ43 as seed ortholog is 96%.
Bootstrap support for A3GFM4 as seed ortholog is 93%.

Group of orthologs #2253. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3JIJ8              	100.00%		A3LS40              	100.00%
Bootstrap support for G3JIJ8 as seed ortholog is 100%.
Bootstrap support for A3LS40 as seed ortholog is 100%.

Group of orthologs #2254. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3JHC2              	100.00%		A3LZW2              	100.00%
Bootstrap support for G3JHC2 as seed ortholog is 100%.
Bootstrap support for A3LZW2 as seed ortholog is 100%.

Group of orthologs #2255. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:55

G3JSC0              	100.00%		A3LR88              	100.00%
Bootstrap support for G3JSC0 as seed ortholog is 100%.
Bootstrap support for A3LR88 as seed ortholog is 88%.

Group of orthologs #2256. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 S.stipitis:151

G3JRK7              	100.00%		A3LW91              	100.00%
Bootstrap support for G3JRK7 as seed ortholog is 100%.
Bootstrap support for A3LW91 as seed ortholog is 100%.

Group of orthologs #2257. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:150

G3JKS0              	100.00%		A3GF01              	100.00%
Bootstrap support for G3JKS0 as seed ortholog is 100%.
Bootstrap support for A3GF01 as seed ortholog is 100%.

Group of orthologs #2258. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:150

G3J954              	100.00%		A3M091              	100.00%
Bootstrap support for G3J954 as seed ortholog is 100%.
Bootstrap support for A3M091 as seed ortholog is 100%.

Group of orthologs #2259. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:150

G3JCE2              	100.00%		A3LX27              	100.00%
Bootstrap support for G3JCE2 as seed ortholog is 100%.
Bootstrap support for A3LX27 as seed ortholog is 100%.

Group of orthologs #2260. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:150

G3JP46              	100.00%		A3LRM4              	100.00%
Bootstrap support for G3JP46 as seed ortholog is 100%.
Bootstrap support for A3LRM4 as seed ortholog is 100%.

Group of orthologs #2261. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:150

G3JT23              	100.00%		A3LNB2              	100.00%
Bootstrap support for G3JT23 as seed ortholog is 100%.
Bootstrap support for A3LNB2 as seed ortholog is 100%.

Group of orthologs #2262. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 S.stipitis:150

G3JMZ6              	100.00%		A3LV76              	100.00%
Bootstrap support for G3JMZ6 as seed ortholog is 100%.
Bootstrap support for A3LV76 as seed ortholog is 100%.

Group of orthologs #2263. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:25 S.stipitis:149

G3JPA3              	100.00%		A3LV81              	100.00%
                    	       		A3LV80              	41.64%
                    	       		A3LUP9              	35.69%
Bootstrap support for G3JPA3 as seed ortholog is 67%.
Alternative seed ortholog is G3JCU2 (25 bits away from this cluster)
Bootstrap support for A3LV81 as seed ortholog is 100%.

Group of orthologs #2264. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3J349              	100.00%		A3GGS4              	100.00%
Bootstrap support for G3J349 as seed ortholog is 100%.
Bootstrap support for A3GGS4 as seed ortholog is 100%.

Group of orthologs #2265. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3J3K3              	100.00%		A3LQG8              	100.00%
Bootstrap support for G3J3K3 as seed ortholog is 100%.
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #2266. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3J2R0              	100.00%		A3LRG3              	100.00%
Bootstrap support for G3J2R0 as seed ortholog is 100%.
Bootstrap support for A3LRG3 as seed ortholog is 100%.

Group of orthologs #2267. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3JBV4              	100.00%		A3GIB3              	100.00%
Bootstrap support for G3JBV4 as seed ortholog is 100%.
Bootstrap support for A3GIB3 as seed ortholog is 100%.

Group of orthologs #2268. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3J3M0              	100.00%		A3LXD7              	100.00%
Bootstrap support for G3J3M0 as seed ortholog is 100%.
Bootstrap support for A3LXD7 as seed ortholog is 100%.

Group of orthologs #2269. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:19

G3JH45              	100.00%		A3GHV1              	100.00%
Bootstrap support for G3JH45 as seed ortholog is 100%.
Bootstrap support for A3GHV1 as seed ortholog is 74%.
Alternative seed ortholog is A3LXH6 (19 bits away from this cluster)

Group of orthologs #2270. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3JJ32              	100.00%		A3GI10              	100.00%
Bootstrap support for G3JJ32 as seed ortholog is 100%.
Bootstrap support for A3GI10 as seed ortholog is 100%.

Group of orthologs #2271. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3JHV7              	100.00%		A3LSI6              	100.00%
Bootstrap support for G3JHV7 as seed ortholog is 100%.
Bootstrap support for A3LSI6 as seed ortholog is 100%.

Group of orthologs #2272. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3JK89              	100.00%		A3LUJ7              	100.00%
Bootstrap support for G3JK89 as seed ortholog is 100%.
Bootstrap support for A3LUJ7 as seed ortholog is 100%.

Group of orthologs #2273. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3JQU0              	100.00%		A3LRK0              	100.00%
Bootstrap support for G3JQU0 as seed ortholog is 100%.
Bootstrap support for A3LRK0 as seed ortholog is 100%.

Group of orthologs #2274. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 S.stipitis:149

G3JUP5              	100.00%		A3LSI0              	100.00%
Bootstrap support for G3JUP5 as seed ortholog is 100%.
Bootstrap support for A3LSI0 as seed ortholog is 100%.

Group of orthologs #2275. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3JCX2              	100.00%		A3GI01              	100.00%
Bootstrap support for G3JCX2 as seed ortholog is 100%.
Bootstrap support for A3GI01 as seed ortholog is 100%.

Group of orthologs #2276. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3J463              	100.00%		A3LY40              	100.00%
Bootstrap support for G3J463 as seed ortholog is 100%.
Bootstrap support for A3LY40 as seed ortholog is 100%.

Group of orthologs #2277. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3JJA8              	100.00%		A3GH49              	100.00%
Bootstrap support for G3JJA8 as seed ortholog is 100%.
Bootstrap support for A3GH49 as seed ortholog is 100%.

Group of orthologs #2278. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:42 S.stipitis:148

G3JHB8              	100.00%		A3LPL2              	100.00%
Bootstrap support for G3JHB8 as seed ortholog is 94%.
Bootstrap support for A3LPL2 as seed ortholog is 100%.

Group of orthologs #2279. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3JN02              	100.00%		A3LNG4              	100.00%
Bootstrap support for G3JN02 as seed ortholog is 100%.
Bootstrap support for A3LNG4 as seed ortholog is 100%.

Group of orthologs #2280. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3JMA5              	100.00%		A3LPS5              	100.00%
Bootstrap support for G3JMA5 as seed ortholog is 100%.
Bootstrap support for A3LPS5 as seed ortholog is 100%.

Group of orthologs #2281. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3JG00              	100.00%		A3LY76              	100.00%
Bootstrap support for G3JG00 as seed ortholog is 100%.
Bootstrap support for A3LY76 as seed ortholog is 100%.

Group of orthologs #2282. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:67

G3JJX0              	100.00%		A3LUK6              	100.00%
Bootstrap support for G3JJX0 as seed ortholog is 100%.
Bootstrap support for A3LUK6 as seed ortholog is 99%.

Group of orthologs #2283. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 S.stipitis:148

G3JPU4              	100.00%		A3LQL5              	100.00%
Bootstrap support for G3JPU4 as seed ortholog is 100%.
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #2284. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:147

G3J753              	100.00%		A3GGL7              	100.00%
Bootstrap support for G3J753 as seed ortholog is 100%.
Bootstrap support for A3GGL7 as seed ortholog is 100%.

Group of orthologs #2285. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:41

G3J5G7              	100.00%		A3LR61              	100.00%
Bootstrap support for G3J5G7 as seed ortholog is 98%.
Bootstrap support for A3LR61 as seed ortholog is 79%.

Group of orthologs #2286. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:147

G3J7H4              	100.00%		A3LPX8              	100.00%
Bootstrap support for G3J7H4 as seed ortholog is 100%.
Bootstrap support for A3LPX8 as seed ortholog is 100%.

Group of orthologs #2287. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:147

G3JCB1              	100.00%		A3LNA8              	100.00%
Bootstrap support for G3JCB1 as seed ortholog is 100%.
Bootstrap support for A3LNA8 as seed ortholog is 100%.

Group of orthologs #2288. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:147

G3JCR9              	100.00%		A3LZK1              	100.00%
Bootstrap support for G3JCR9 as seed ortholog is 100%.
Bootstrap support for A3LZK1 as seed ortholog is 100%.

Group of orthologs #2289. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 S.stipitis:147

G3JG82              	100.00%		A3LZI6              	100.00%
Bootstrap support for G3JG82 as seed ortholog is 100%.
Bootstrap support for A3LZI6 as seed ortholog is 100%.

Group of orthologs #2290. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:25 S.stipitis:146

G3JHZ0              	100.00%		A3GHB8              	100.00%
G3JGA1              	9.96%		
Bootstrap support for G3JHZ0 as seed ortholog is 68%.
Alternative seed ortholog is G3JFE9 (25 bits away from this cluster)
Bootstrap support for A3GHB8 as seed ortholog is 100%.

Group of orthologs #2291. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3J6F0              	100.00%		A3GF41              	100.00%
Bootstrap support for G3J6F0 as seed ortholog is 100%.
Bootstrap support for A3GF41 as seed ortholog is 100%.

Group of orthologs #2292. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3J9A0              	100.00%		A3LSY4              	100.00%
Bootstrap support for G3J9A0 as seed ortholog is 100%.
Bootstrap support for A3LSY4 as seed ortholog is 100%.

Group of orthologs #2293. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3JGG3              	100.00%		A3LN77              	100.00%
Bootstrap support for G3JGG3 as seed ortholog is 100%.
Bootstrap support for A3LN77 as seed ortholog is 100%.

Group of orthologs #2294. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3J896              	100.00%		A3M0L6              	100.00%
Bootstrap support for G3J896 as seed ortholog is 100%.
Bootstrap support for A3M0L6 as seed ortholog is 100%.

Group of orthologs #2295. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3JFT3              	100.00%		A3LTX2              	100.00%
Bootstrap support for G3JFT3 as seed ortholog is 100%.
Bootstrap support for A3LTX2 as seed ortholog is 100%.

Group of orthologs #2296. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3JEL5              	100.00%		A3LY98              	100.00%
Bootstrap support for G3JEL5 as seed ortholog is 100%.
Bootstrap support for A3LY98 as seed ortholog is 100%.

Group of orthologs #2297. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3JTH3              	100.00%		A3GG65              	100.00%
Bootstrap support for G3JTH3 as seed ortholog is 100%.
Bootstrap support for A3GG65 as seed ortholog is 100%.

Group of orthologs #2298. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 S.stipitis:146

G3JTR3              	100.00%		A3LNE6              	100.00%
Bootstrap support for G3JTR3 as seed ortholog is 100%.
Bootstrap support for A3LNE6 as seed ortholog is 100%.

Group of orthologs #2299. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:46 S.stipitis:145

G3J6Y6              	100.00%		A3GG78              	100.00%
                    	       		A3GH10              	93.19%
                    	       		A3LU21              	87.46%
                    	       		A3GGR3              	71.68%
                    	       		A3LW44              	68.82%
Bootstrap support for G3J6Y6 as seed ortholog is 86%.
Bootstrap support for A3GG78 as seed ortholog is 100%.

Group of orthologs #2300. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 S.stipitis:145

G3J3W4              	100.00%		A3GHX3              	100.00%
Bootstrap support for G3J3W4 as seed ortholog is 100%.
Bootstrap support for A3GHX3 as seed ortholog is 100%.

Group of orthologs #2301. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:145

G3JHI8              	100.00%		A3GF23              	100.00%
Bootstrap support for G3JHI8 as seed ortholog is 99%.
Bootstrap support for A3GF23 as seed ortholog is 100%.

Group of orthologs #2302. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 S.stipitis:145

G3JFZ6              	100.00%		A3LN36              	100.00%
Bootstrap support for G3JFZ6 as seed ortholog is 100%.
Bootstrap support for A3LN36 as seed ortholog is 100%.

Group of orthologs #2303. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:144

G3J6G7              	100.00%		A3LZX3              	100.00%
G3JL46              	7.19%		A3LPI1              	77.63%
                    	       		A3GHL5              	9.17%
Bootstrap support for G3J6G7 as seed ortholog is 97%.
Bootstrap support for A3LZX3 as seed ortholog is 100%.

Group of orthologs #2304. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:78 S.stipitis:144

G3JE84              	100.00%		A3LRY8              	100.00%
                    	       		A3GFR6              	19.03%
Bootstrap support for G3JE84 as seed ortholog is 94%.
Bootstrap support for A3LRY8 as seed ortholog is 100%.

Group of orthologs #2305. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3J5E5              	100.00%		A3GH77              	100.00%
Bootstrap support for G3J5E5 as seed ortholog is 100%.
Bootstrap support for A3GH77 as seed ortholog is 100%.

Group of orthologs #2306. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3J5T8              	100.00%		A3LQ39              	100.00%
Bootstrap support for G3J5T8 as seed ortholog is 100%.
Bootstrap support for A3LQ39 as seed ortholog is 100%.

Group of orthologs #2307. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3J3T5              	100.00%		A3LTW7              	100.00%
Bootstrap support for G3J3T5 as seed ortholog is 100%.
Bootstrap support for A3LTW7 as seed ortholog is 100%.

Group of orthologs #2308. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3J7S8              	100.00%		A3LSS2              	100.00%
Bootstrap support for G3J7S8 as seed ortholog is 100%.
Bootstrap support for A3LSS2 as seed ortholog is 100%.

Group of orthologs #2309. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3J9T1              	100.00%		A3LS71              	100.00%
Bootstrap support for G3J9T1 as seed ortholog is 100%.
Bootstrap support for A3LS71 as seed ortholog is 100%.

Group of orthologs #2310. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3JED5              	100.00%		A3LR02              	100.00%
Bootstrap support for G3JED5 as seed ortholog is 100%.
Bootstrap support for A3LR02 as seed ortholog is 100%.

Group of orthologs #2311. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3JDC9              	100.00%		A3LXY3              	100.00%
Bootstrap support for G3JDC9 as seed ortholog is 100%.
Bootstrap support for A3LXY3 as seed ortholog is 100%.

Group of orthologs #2312. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3JHJ7              	100.00%		A3LZX9              	100.00%
Bootstrap support for G3JHJ7 as seed ortholog is 100%.
Bootstrap support for A3LZX9 as seed ortholog is 100%.

Group of orthologs #2313. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3JMG6              	100.00%		A3LWI5              	100.00%
Bootstrap support for G3JMG6 as seed ortholog is 100%.
Bootstrap support for A3LWI5 as seed ortholog is 100%.

Group of orthologs #2314. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 S.stipitis:144

G3JQY8              	100.00%		A3LVH5              	100.00%
Bootstrap support for G3JQY8 as seed ortholog is 100%.
Bootstrap support for A3LVH5 as seed ortholog is 100%.

Group of orthologs #2315. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:37 S.stipitis:144

G3JUW0              	100.00%		A3LWH9              	100.00%
Bootstrap support for G3JUW0 as seed ortholog is 78%.
Bootstrap support for A3LWH9 as seed ortholog is 100%.

Group of orthologs #2316. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:143

G3J3V9              	100.00%		A3GG95              	100.00%
Bootstrap support for G3J3V9 as seed ortholog is 100%.
Bootstrap support for A3GG95 as seed ortholog is 100%.

Group of orthologs #2317. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:143

G3JBM2              	100.00%		A3GF27              	100.00%
Bootstrap support for G3JBM2 as seed ortholog is 100%.
Bootstrap support for A3GF27 as seed ortholog is 100%.

Group of orthologs #2318. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:143

G3JB69              	100.00%		A3GH97              	100.00%
Bootstrap support for G3JB69 as seed ortholog is 98%.
Bootstrap support for A3GH97 as seed ortholog is 100%.

Group of orthologs #2319. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:143

G3JDL7              	100.00%		A3LY42              	100.00%
Bootstrap support for G3JDL7 as seed ortholog is 100%.
Bootstrap support for A3LY42 as seed ortholog is 100%.

Group of orthologs #2320. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:143

G3JMT1              	100.00%		A3LVH2              	100.00%
Bootstrap support for G3JMT1 as seed ortholog is 100%.
Bootstrap support for A3LVH2 as seed ortholog is 100%.

Group of orthologs #2321. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:143

G3JPS6              	100.00%		A3LYN7              	100.00%
Bootstrap support for G3JPS6 as seed ortholog is 100%.
Bootstrap support for A3LYN7 as seed ortholog is 100%.

Group of orthologs #2322. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 S.stipitis:143

G3JUP1              	100.00%		A3LX04              	100.00%
Bootstrap support for G3JUP1 as seed ortholog is 100%.
Bootstrap support for A3LX04 as seed ortholog is 100%.

Group of orthologs #2323. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 S.stipitis:142

G3J8P5              	100.00%		A3GEU8              	100.00%
Bootstrap support for G3J8P5 as seed ortholog is 100%.
Bootstrap support for A3GEU8 as seed ortholog is 100%.

Group of orthologs #2324. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 S.stipitis:142

G3J3Z6              	100.00%		A3LV38              	100.00%
Bootstrap support for G3J3Z6 as seed ortholog is 100%.
Bootstrap support for A3LV38 as seed ortholog is 100%.

Group of orthologs #2325. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 S.stipitis:142

G3JMG9              	100.00%		A3LWJ0              	100.00%
Bootstrap support for G3JMG9 as seed ortholog is 100%.
Bootstrap support for A3LWJ0 as seed ortholog is 100%.

Group of orthologs #2326. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:96

G3JBP7              	100.00%		A3LQT8              	100.00%
G3JET1              	13.75%		A3LQT7              	39.83%
G3JML5              	7.39%		
G3JAL1              	5.50%		
Bootstrap support for G3JBP7 as seed ortholog is 97%.
Bootstrap support for A3LQT8 as seed ortholog is 99%.

Group of orthologs #2327. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 S.stipitis:141

G3JAF4              	100.00%		A3GHT8              	100.00%
Bootstrap support for G3JAF4 as seed ortholog is 100%.
Bootstrap support for A3GHT8 as seed ortholog is 100%.

Group of orthologs #2328. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 S.stipitis:141

G3JLA9              	100.00%		A3LMY9              	100.00%
Bootstrap support for G3JLA9 as seed ortholog is 100%.
Bootstrap support for A3LMY9 as seed ortholog is 100%.

Group of orthologs #2329. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 S.stipitis:141

G3JEC2              	100.00%		A3LXK7              	100.00%
Bootstrap support for G3JEC2 as seed ortholog is 100%.
Bootstrap support for A3LXK7 as seed ortholog is 100%.

Group of orthologs #2330. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 S.stipitis:141

G3JV11              	100.00%		A3LNE4              	100.00%
Bootstrap support for G3JV11 as seed ortholog is 100%.
Bootstrap support for A3LNE4 as seed ortholog is 100%.

Group of orthologs #2331. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 S.stipitis:86

G3JA24              	100.00%		A3LW94              	100.00%
Bootstrap support for G3JA24 as seed ortholog is 100%.
Bootstrap support for A3LW94 as seed ortholog is 99%.

Group of orthologs #2332. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 S.stipitis:140

G3JK54              	100.00%		A3LSU6              	100.00%
Bootstrap support for G3JK54 as seed ortholog is 100%.
Bootstrap support for A3LSU6 as seed ortholog is 100%.

Group of orthologs #2333. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 S.stipitis:139

G3J3J2              	100.00%		A3LU02              	100.00%
Bootstrap support for G3J3J2 as seed ortholog is 100%.
Bootstrap support for A3LU02 as seed ortholog is 100%.

Group of orthologs #2334. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 S.stipitis:139

G3JPH0              	100.00%		A3GHJ8              	100.00%
Bootstrap support for G3JPH0 as seed ortholog is 100%.
Bootstrap support for A3GHJ8 as seed ortholog is 100%.

Group of orthologs #2335. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 S.stipitis:139

G3JSN5              	100.00%		A3GFC3              	100.00%
Bootstrap support for G3JSN5 as seed ortholog is 100%.
Bootstrap support for A3GFC3 as seed ortholog is 100%.

Group of orthologs #2336. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 S.stipitis:139

G3JTS6              	100.00%		A3GGC3              	100.00%
Bootstrap support for G3JTS6 as seed ortholog is 100%.
Bootstrap support for A3GGC3 as seed ortholog is 100%.

Group of orthologs #2337. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 S.stipitis:139

G3JR92              	100.00%		A3LVY8              	100.00%
Bootstrap support for G3JR92 as seed ortholog is 100%.
Bootstrap support for A3LVY8 as seed ortholog is 100%.

Group of orthologs #2338. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3J2Z2              	100.00%		A3LS70              	100.00%
G3JGN1              	28.57%		
Bootstrap support for G3J2Z2 as seed ortholog is 100%.
Bootstrap support for A3LS70 as seed ortholog is 100%.

Group of orthologs #2339. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JDA8              	100.00%		A3LQL1              	100.00%
G3JAZ1              	65.65%		
Bootstrap support for G3JDA8 as seed ortholog is 100%.
Bootstrap support for A3LQL1 as seed ortholog is 100%.

Group of orthologs #2340. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JN69              	100.00%		A3LUU9              	100.00%
                    	       		A3LZJ3              	17.17%
Bootstrap support for G3JN69 as seed ortholog is 100%.
Bootstrap support for A3LUU9 as seed ortholog is 100%.

Group of orthologs #2341. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JNR6              	100.00%		A3LW00              	100.00%
                    	       		A3LVZ9              	6.07%
Bootstrap support for G3JNR6 as seed ortholog is 100%.
Bootstrap support for A3LW00 as seed ortholog is 100%.

Group of orthologs #2342. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3J5A3              	100.00%		A3LTQ7              	100.00%
Bootstrap support for G3J5A3 as seed ortholog is 100%.
Bootstrap support for A3LTQ7 as seed ortholog is 100%.

Group of orthologs #2343. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JHP5              	100.00%		A3GFB2              	100.00%
Bootstrap support for G3JHP5 as seed ortholog is 100%.
Bootstrap support for A3GFB2 as seed ortholog is 100%.

Group of orthologs #2344. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3J8E8              	100.00%		A3LUD8              	100.00%
Bootstrap support for G3J8E8 as seed ortholog is 100%.
Bootstrap support for A3LUD8 as seed ortholog is 100%.

Group of orthologs #2345. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:89

G3J6A8              	100.00%		A3LYY7              	100.00%
Bootstrap support for G3J6A8 as seed ortholog is 99%.
Bootstrap support for A3LYY7 as seed ortholog is 99%.

Group of orthologs #2346. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3J509              	100.00%		A3M0L1              	100.00%
Bootstrap support for G3J509 as seed ortholog is 100%.
Bootstrap support for A3M0L1 as seed ortholog is 100%.

Group of orthologs #2347. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JFD7              	100.00%		A3LQE4              	100.00%
Bootstrap support for G3JFD7 as seed ortholog is 100%.
Bootstrap support for A3LQE4 as seed ortholog is 100%.

Group of orthologs #2348. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:86

G3JQ15              	100.00%		A3GG27              	100.00%
Bootstrap support for G3JQ15 as seed ortholog is 100%.
Bootstrap support for A3GG27 as seed ortholog is 99%.

Group of orthologs #2349. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JNP1              	100.00%		A3LNT2              	100.00%
Bootstrap support for G3JNP1 as seed ortholog is 100%.
Bootstrap support for A3LNT2 as seed ortholog is 100%.

Group of orthologs #2350. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JLK1              	100.00%		A3LRI4              	100.00%
Bootstrap support for G3JLK1 as seed ortholog is 100%.
Bootstrap support for A3LRI4 as seed ortholog is 100%.

Group of orthologs #2351. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 S.stipitis:138

G3JRA6              	100.00%		A3LXB4              	100.00%
Bootstrap support for G3JRA6 as seed ortholog is 100%.
Bootstrap support for A3LXB4 as seed ortholog is 100%.

Group of orthologs #2352. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 S.stipitis:137

G3JG97              	100.00%		A3M0C6              	100.00%
Bootstrap support for G3JG97 as seed ortholog is 100%.
Bootstrap support for A3M0C6 as seed ortholog is 100%.

Group of orthologs #2353. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 S.stipitis:137

G3JLJ0              	100.00%		A3LZ54              	100.00%
Bootstrap support for G3JLJ0 as seed ortholog is 100%.
Bootstrap support for A3LZ54 as seed ortholog is 100%.

Group of orthologs #2354. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:52 S.stipitis:136

G3J604              	100.00%		A3LPY2              	100.00%
                    	       		A3LPY1              	14.57%
Bootstrap support for G3J604 as seed ortholog is 91%.
Bootstrap support for A3LPY2 as seed ortholog is 100%.

Group of orthologs #2355. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 S.stipitis:136

G3JE60              	100.00%		A3LNQ9              	100.00%
Bootstrap support for G3JE60 as seed ortholog is 100%.
Bootstrap support for A3LNQ9 as seed ortholog is 100%.

Group of orthologs #2356. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 S.stipitis:136

G3JUA2              	100.00%		A3GFG6              	100.00%
Bootstrap support for G3JUA2 as seed ortholog is 100%.
Bootstrap support for A3GFG6 as seed ortholog is 100%.

Group of orthologs #2357. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JG59              	100.00%		A3LVQ4              	100.00%
                    	       		A3LXH2              	10.60%
Bootstrap support for G3JG59 as seed ortholog is 100%.
Bootstrap support for A3LVQ4 as seed ortholog is 100%.

Group of orthologs #2358. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JAF3              	100.00%		A3GHD3              	100.00%
Bootstrap support for G3JAF3 as seed ortholog is 100%.
Bootstrap support for A3GHD3 as seed ortholog is 100%.

Group of orthologs #2359. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3J443              	100.00%		A3LTT8              	100.00%
Bootstrap support for G3J443 as seed ortholog is 100%.
Bootstrap support for A3LTT8 as seed ortholog is 100%.

Group of orthologs #2360. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:92

G3JIP4              	100.00%		A3LNC6              	100.00%
Bootstrap support for G3JIP4 as seed ortholog is 100%.
Bootstrap support for A3LNC6 as seed ortholog is 99%.

Group of orthologs #2361. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JDY0              	100.00%		A3M0G4              	100.00%
Bootstrap support for G3JDY0 as seed ortholog is 100%.
Bootstrap support for A3M0G4 as seed ortholog is 100%.

Group of orthologs #2362. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JN66              	100.00%		A3LRX1              	100.00%
Bootstrap support for G3JN66 as seed ortholog is 100%.
Bootstrap support for A3LRX1 as seed ortholog is 100%.

Group of orthologs #2363. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JKM2              	100.00%		A3LXC9              	100.00%
Bootstrap support for G3JKM2 as seed ortholog is 100%.
Bootstrap support for A3LXC9 as seed ortholog is 100%.

Group of orthologs #2364. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JU23              	100.00%		A3LQW0              	100.00%
Bootstrap support for G3JU23 as seed ortholog is 100%.
Bootstrap support for A3LQW0 as seed ortholog is 100%.

Group of orthologs #2365. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 S.stipitis:135

G3JUX6              	100.00%		A3LRV6              	100.00%
Bootstrap support for G3JUX6 as seed ortholog is 100%.
Bootstrap support for A3LRV6 as seed ortholog is 100%.

Group of orthologs #2366. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:134

G3J2L3              	100.00%		A3GI38              	100.00%
G3JSZ5              	100.00%		A3GI39              	100.00%
Bootstrap support for G3J2L3 as seed ortholog is 96%.
Bootstrap support for G3JSZ5 as seed ortholog is 93%.
Bootstrap support for A3GI38 as seed ortholog is 100%.
Bootstrap support for A3GI39 as seed ortholog is 100%.

Group of orthologs #2367. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3JIR4              	100.00%		A3LWD7              	100.00%
G3JM18              	23.94%		
Bootstrap support for G3JIR4 as seed ortholog is 100%.
Bootstrap support for A3LWD7 as seed ortholog is 100%.

Group of orthologs #2368. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3J7N0              	100.00%		A3GFI2              	100.00%
Bootstrap support for G3J7N0 as seed ortholog is 100%.
Bootstrap support for A3GFI2 as seed ortholog is 100%.

Group of orthologs #2369. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3J4B2              	100.00%		A3LRP1              	100.00%
Bootstrap support for G3J4B2 as seed ortholog is 100%.
Bootstrap support for A3LRP1 as seed ortholog is 100%.

Group of orthologs #2370. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3J6C2              	100.00%		A3LQ07              	100.00%
Bootstrap support for G3J6C2 as seed ortholog is 100%.
Bootstrap support for A3LQ07 as seed ortholog is 100%.

Group of orthologs #2371. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3J3X0              	100.00%		A3LT47              	100.00%
Bootstrap support for G3J3X0 as seed ortholog is 100%.
Bootstrap support for A3LT47 as seed ortholog is 100%.

Group of orthologs #2372. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3JDQ3              	100.00%		A3GGG2              	100.00%
Bootstrap support for G3JDQ3 as seed ortholog is 100%.
Bootstrap support for A3GGG2 as seed ortholog is 100%.

Group of orthologs #2373. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:134

G3J918              	100.00%		A3LTP4              	100.00%
Bootstrap support for G3J918 as seed ortholog is 92%.
Bootstrap support for A3LTP4 as seed ortholog is 100%.

Group of orthologs #2374. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3J6P6              	100.00%		A3LZ64              	100.00%
Bootstrap support for G3J6P6 as seed ortholog is 100%.
Bootstrap support for A3LZ64 as seed ortholog is 100%.

Group of orthologs #2375. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:134

G3J8G7              	100.00%		A3M080              	100.00%
Bootstrap support for G3J8G7 as seed ortholog is 100%.
Bootstrap support for A3M080 as seed ortholog is 100%.

Group of orthologs #2376. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3JLR8              	100.00%		A3LRN5              	100.00%
Bootstrap support for G3JLR8 as seed ortholog is 100%.
Bootstrap support for A3LRN5 as seed ortholog is 100%.

Group of orthologs #2377. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3JM90              	100.00%		A3LTR4              	100.00%
Bootstrap support for G3JM90 as seed ortholog is 100%.
Bootstrap support for A3LTR4 as seed ortholog is 100%.

Group of orthologs #2378. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 S.stipitis:134

G3JNS3              	100.00%		A3LXU8              	100.00%
Bootstrap support for G3JNS3 as seed ortholog is 100%.
Bootstrap support for A3LXU8 as seed ortholog is 100%.

Group of orthologs #2379. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:134

G3JRH8              	100.00%		A3LVD2              	100.00%
Bootstrap support for G3JRH8 as seed ortholog is 98%.
Bootstrap support for A3LVD2 as seed ortholog is 100%.

Group of orthologs #2380. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JII0              	100.00%		A3LZ02              	100.00%
                    	       		A3GFX8              	70.00%
Bootstrap support for G3JII0 as seed ortholog is 100%.
Bootstrap support for A3LZ02 as seed ortholog is 100%.

Group of orthologs #2381. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3J6M3              	100.00%		A3LVP5              	100.00%
Bootstrap support for G3J6M3 as seed ortholog is 100%.
Bootstrap support for A3LVP5 as seed ortholog is 100%.

Group of orthologs #2382. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JCB3              	100.00%		A3LQZ8              	100.00%
Bootstrap support for G3JCB3 as seed ortholog is 100%.
Bootstrap support for A3LQZ8 as seed ortholog is 100%.

Group of orthologs #2383. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JFC4              	100.00%		A3LPL5              	100.00%
Bootstrap support for G3JFC4 as seed ortholog is 100%.
Bootstrap support for A3LPL5 as seed ortholog is 100%.

Group of orthologs #2384. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JMS5              	100.00%		A3GF62              	100.00%
Bootstrap support for G3JMS5 as seed ortholog is 100%.
Bootstrap support for A3GF62 as seed ortholog is 100%.

Group of orthologs #2385. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JB41              	100.00%		A3LW90              	100.00%
Bootstrap support for G3JB41 as seed ortholog is 100%.
Bootstrap support for A3LW90 as seed ortholog is 100%.

Group of orthologs #2386. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JMS6              	100.00%		A3GFG1              	100.00%
Bootstrap support for G3JMS6 as seed ortholog is 100%.
Bootstrap support for A3GFG1 as seed ortholog is 100%.

Group of orthologs #2387. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JLH0              	100.00%		A3LRS0              	100.00%
Bootstrap support for G3JLH0 as seed ortholog is 100%.
Bootstrap support for A3LRS0 as seed ortholog is 100%.

Group of orthologs #2388. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JG13              	100.00%		A3LYP0              	100.00%
Bootstrap support for G3JG13 as seed ortholog is 100%.
Bootstrap support for A3LYP0 as seed ortholog is 100%.

Group of orthologs #2389. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:46 S.stipitis:133

G3JUL9              	100.00%		A3GHB6              	100.00%
Bootstrap support for G3JUL9 as seed ortholog is 89%.
Bootstrap support for A3GHB6 as seed ortholog is 100%.

Group of orthologs #2390. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 S.stipitis:133

G3JQ96              	100.00%		A3LU01              	100.00%
Bootstrap support for G3JQ96 as seed ortholog is 100%.
Bootstrap support for A3LU01 as seed ortholog is 100%.

Group of orthologs #2391. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:59 S.stipitis:36

G3J4W1              	100.00%		A3LSF1              	100.00%
Bootstrap support for G3J4W1 as seed ortholog is 99%.
Bootstrap support for A3LSF1 as seed ortholog is 97%.

Group of orthologs #2392. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 S.stipitis:132

G3JAS2              	100.00%		A3LNG9              	100.00%
Bootstrap support for G3JAS2 as seed ortholog is 100%.
Bootstrap support for A3LNG9 as seed ortholog is 100%.

Group of orthologs #2393. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 S.stipitis:90

G3JMH0              	100.00%		A3GFY9              	100.00%
Bootstrap support for G3JMH0 as seed ortholog is 100%.
Bootstrap support for A3GFY9 as seed ortholog is 99%.

Group of orthologs #2394. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 S.stipitis:132

G3JMN5              	100.00%		A3LPR9              	100.00%
Bootstrap support for G3JMN5 as seed ortholog is 100%.
Bootstrap support for A3LPR9 as seed ortholog is 100%.

Group of orthologs #2395. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 S.stipitis:132

G3JRF0              	100.00%		A3LMS0              	100.00%
Bootstrap support for G3JRF0 as seed ortholog is 100%.
Bootstrap support for A3LMS0 as seed ortholog is 100%.

Group of orthologs #2396. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 S.stipitis:132

G3JRC1              	100.00%		A3LZM0              	100.00%
Bootstrap support for G3JRC1 as seed ortholog is 100%.
Bootstrap support for A3LZM0 as seed ortholog is 100%.

Group of orthologs #2397. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3J977              	100.00%		A3LNK5              	100.00%
Bootstrap support for G3J977 as seed ortholog is 100%.
Bootstrap support for A3LNK5 as seed ortholog is 100%.

Group of orthologs #2398. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JBD3              	100.00%		A3LQW8              	100.00%
Bootstrap support for G3JBD3 as seed ortholog is 100%.
Bootstrap support for A3LQW8 as seed ortholog is 100%.

Group of orthologs #2399. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JEE1              	100.00%		A3LP52              	100.00%
Bootstrap support for G3JEE1 as seed ortholog is 100%.
Bootstrap support for A3LP52 as seed ortholog is 100%.

Group of orthologs #2400. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JDQ8              	100.00%		A3LTB2              	100.00%
Bootstrap support for G3JDQ8 as seed ortholog is 100%.
Bootstrap support for A3LTB2 as seed ortholog is 100%.

Group of orthologs #2401. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JKK0              	100.00%		A3GHG7              	100.00%
Bootstrap support for G3JKK0 as seed ortholog is 100%.
Bootstrap support for A3GHG7 as seed ortholog is 100%.

Group of orthologs #2402. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JI59              	100.00%		A3LVH3              	100.00%
Bootstrap support for G3JI59 as seed ortholog is 100%.
Bootstrap support for A3LVH3 as seed ortholog is 100%.

Group of orthologs #2403. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JU53              	100.00%		A3GHQ3              	100.00%
Bootstrap support for G3JU53 as seed ortholog is 100%.
Bootstrap support for A3GHQ3 as seed ortholog is 100%.

Group of orthologs #2404. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JMB0              	100.00%		A3LUW9              	100.00%
Bootstrap support for G3JMB0 as seed ortholog is 100%.
Bootstrap support for A3LUW9 as seed ortholog is 100%.

Group of orthologs #2405. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:131

G3JLU0              	100.00%		A3LW05              	100.00%
Bootstrap support for G3JLU0 as seed ortholog is 96%.
Bootstrap support for A3LW05 as seed ortholog is 100%.

Group of orthologs #2406. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 S.stipitis:131

G3JUM5              	100.00%		A3M0C9              	100.00%
Bootstrap support for G3JUM5 as seed ortholog is 100%.
Bootstrap support for A3M0C9 as seed ortholog is 100%.

Group of orthologs #2407. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JGV0              	100.00%		A3M0B4              	100.00%
                    	       		A3LQ65              	14.30%
Bootstrap support for G3JGV0 as seed ortholog is 100%.
Bootstrap support for A3M0B4 as seed ortholog is 100%.

Group of orthologs #2408. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3J2Q7              	100.00%		A3LWI1              	100.00%
Bootstrap support for G3J2Q7 as seed ortholog is 100%.
Bootstrap support for A3LWI1 as seed ortholog is 100%.

Group of orthologs #2409. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3J8F5              	100.00%		A3LWV4              	100.00%
Bootstrap support for G3J8F5 as seed ortholog is 100%.
Bootstrap support for A3LWV4 as seed ortholog is 100%.

Group of orthologs #2410. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JD66              	100.00%		A3LU03              	100.00%
Bootstrap support for G3JD66 as seed ortholog is 100%.
Bootstrap support for A3LU03 as seed ortholog is 100%.

Group of orthologs #2411. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JDS6              	100.00%		A3LW32              	100.00%
Bootstrap support for G3JDS6 as seed ortholog is 100%.
Bootstrap support for A3LW32 as seed ortholog is 100%.

Group of orthologs #2412. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JN87              	100.00%		A3LRF4              	100.00%
Bootstrap support for G3JN87 as seed ortholog is 100%.
Bootstrap support for A3LRF4 as seed ortholog is 100%.

Group of orthologs #2413. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JME9              	100.00%		A3LSR9              	100.00%
Bootstrap support for G3JME9 as seed ortholog is 100%.
Bootstrap support for A3LSR9 as seed ortholog is 100%.

Group of orthologs #2414. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:74

G3JQH0              	100.00%		A3LPW4              	100.00%
Bootstrap support for G3JQH0 as seed ortholog is 100%.
Bootstrap support for A3LPW4 as seed ortholog is 99%.

Group of orthologs #2415. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JNT3              	100.00%		A3LSL1              	100.00%
Bootstrap support for G3JNT3 as seed ortholog is 100%.
Bootstrap support for A3LSL1 as seed ortholog is 100%.

Group of orthologs #2416. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JPI7              	100.00%		A3LTR7              	100.00%
Bootstrap support for G3JPI7 as seed ortholog is 100%.
Bootstrap support for A3LTR7 as seed ortholog is 100%.

Group of orthologs #2417. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JP03              	100.00%		A3LVR0              	100.00%
Bootstrap support for G3JP03 as seed ortholog is 100%.
Bootstrap support for A3LVR0 as seed ortholog is 100%.

Group of orthologs #2418. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 S.stipitis:130

G3JJH1              	100.00%		A3M0E2              	100.00%
Bootstrap support for G3JJH1 as seed ortholog is 100%.
Bootstrap support for A3M0E2 as seed ortholog is 100%.

Group of orthologs #2419. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3J6K5              	100.00%		A3LUB2              	100.00%
G3JHN1              	15.25%		
Bootstrap support for G3J6K5 as seed ortholog is 100%.
Bootstrap support for A3LUB2 as seed ortholog is 100%.

Group of orthologs #2420. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3J3B6              	100.00%		A3GFD9              	100.00%
Bootstrap support for G3J3B6 as seed ortholog is 100%.
Bootstrap support for A3GFD9 as seed ortholog is 100%.

Group of orthologs #2421. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3J3N5              	100.00%		A3LS86              	100.00%
Bootstrap support for G3J3N5 as seed ortholog is 100%.
Bootstrap support for A3LS86 as seed ortholog is 100%.

Group of orthologs #2422. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3J3L2              	100.00%		A3LTB9              	100.00%
Bootstrap support for G3J3L2 as seed ortholog is 100%.
Bootstrap support for A3LTB9 as seed ortholog is 100%.

Group of orthologs #2423. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3J9R8              	100.00%		A3LN14              	100.00%
Bootstrap support for G3J9R8 as seed ortholog is 100%.
Bootstrap support for A3LN14 as seed ortholog is 100%.

Group of orthologs #2424. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3J7V8              	100.00%		A3LZ30              	100.00%
Bootstrap support for G3J7V8 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #2425. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:45 S.stipitis:24

G3JC49              	100.00%		A3LVJ3              	100.00%
Bootstrap support for G3JC49 as seed ortholog is 72%.
Alternative seed ortholog is G3J477 (45 bits away from this cluster)
Bootstrap support for A3LVJ3 as seed ortholog is 93%.

Group of orthologs #2426. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3JMR1              	100.00%		A3LMY2              	100.00%
Bootstrap support for G3JMR1 as seed ortholog is 100%.
Bootstrap support for A3LMY2 as seed ortholog is 100%.

Group of orthologs #2427. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 S.stipitis:129

G3JS11              	100.00%		A3LU68              	100.00%
Bootstrap support for G3JS11 as seed ortholog is 100%.
Bootstrap support for A3LU68 as seed ortholog is 100%.

Group of orthologs #2428. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3J9V6              	100.00%		A3LN98              	100.00%
Bootstrap support for G3J9V6 as seed ortholog is 100%.
Bootstrap support for A3LN98 as seed ortholog is 100%.

Group of orthologs #2429. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3JCQ2              	100.00%		A3GGV6              	100.00%
Bootstrap support for G3JCQ2 as seed ortholog is 100%.
Bootstrap support for A3GGV6 as seed ortholog is 100%.

Group of orthologs #2430. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3J6A0              	100.00%		A3LVZ2              	100.00%
Bootstrap support for G3J6A0 as seed ortholog is 100%.
Bootstrap support for A3LVZ2 as seed ortholog is 100%.

Group of orthologs #2431. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3JGV3              	100.00%		A3LMW7              	100.00%
Bootstrap support for G3JGV3 as seed ortholog is 100%.
Bootstrap support for A3LMW7 as seed ortholog is 100%.

Group of orthologs #2432. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3J9K7              	100.00%		A3LVS4              	100.00%
Bootstrap support for G3J9K7 as seed ortholog is 100%.
Bootstrap support for A3LVS4 as seed ortholog is 100%.

Group of orthologs #2433. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3JQX4              	100.00%		A3GGB5              	100.00%
Bootstrap support for G3JQX4 as seed ortholog is 100%.
Bootstrap support for A3GGB5 as seed ortholog is 100%.

Group of orthologs #2434. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3JN06              	100.00%		A3LRD9              	100.00%
Bootstrap support for G3JN06 as seed ortholog is 100%.
Bootstrap support for A3LRD9 as seed ortholog is 100%.

Group of orthologs #2435. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 S.stipitis:128

G3JV24              	100.00%		A3M070              	100.00%
Bootstrap support for G3JV24 as seed ortholog is 100%.
Bootstrap support for A3M070 as seed ortholog is 100%.

Group of orthologs #2436. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:127

G3JDC4              	100.00%		A3GGE6              	100.00%
Bootstrap support for G3JDC4 as seed ortholog is 100%.
Bootstrap support for A3GGE6 as seed ortholog is 100%.

Group of orthologs #2437. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:127

G3JH78              	100.00%		A3LT97              	100.00%
Bootstrap support for G3JH78 as seed ortholog is 100%.
Bootstrap support for A3LT97 as seed ortholog is 100%.

Group of orthologs #2438. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:127

G3JS73              	100.00%		A3GI68              	100.00%
Bootstrap support for G3JS73 as seed ortholog is 100%.
Bootstrap support for A3GI68 as seed ortholog is 100%.

Group of orthologs #2439. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:127

G3JSH5              	100.00%		A3LVL6              	100.00%
Bootstrap support for G3JSH5 as seed ortholog is 100%.
Bootstrap support for A3LVL6 as seed ortholog is 100%.

Group of orthologs #2440. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 S.stipitis:127

G3JUA1              	100.00%		A3LWZ5              	100.00%
Bootstrap support for G3JUA1 as seed ortholog is 100%.
Bootstrap support for A3LWZ5 as seed ortholog is 100%.

Group of orthologs #2441. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:126

G3J613              	100.00%		A3LRZ5              	100.00%
Bootstrap support for G3J613 as seed ortholog is 100%.
Bootstrap support for A3LRZ5 as seed ortholog is 100%.

Group of orthologs #2442. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:126

G3JF40              	100.00%		A3GI50              	100.00%
Bootstrap support for G3JF40 as seed ortholog is 100%.
Bootstrap support for A3GI50 as seed ortholog is 100%.

Group of orthologs #2443. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:126

G3JA97              	100.00%		A3LVW9              	100.00%
Bootstrap support for G3JA97 as seed ortholog is 100%.
Bootstrap support for A3LVW9 as seed ortholog is 100%.

Group of orthologs #2444. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:64

G3JBH7              	100.00%		A3LYM5              	100.00%
Bootstrap support for G3JBH7 as seed ortholog is 100%.
Bootstrap support for A3LYM5 as seed ortholog is 94%.

Group of orthologs #2445. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:126

G3JLJ1              	100.00%		A3LPR7              	100.00%
Bootstrap support for G3JLJ1 as seed ortholog is 100%.
Bootstrap support for A3LPR7 as seed ortholog is 100%.

Group of orthologs #2446. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 S.stipitis:126

G3JPL9              	100.00%		A3LWR7              	100.00%
Bootstrap support for G3JPL9 as seed ortholog is 100%.
Bootstrap support for A3LWR7 as seed ortholog is 100%.

Group of orthologs #2447. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 S.stipitis:125

G3JUM4              	100.00%		A3LUX6              	100.00%
                    	       		A3LSB6              	40.26%
                    	       		A3LQJ9              	29.22%
Bootstrap support for G3JUM4 as seed ortholog is 100%.
Bootstrap support for A3LUX6 as seed ortholog is 100%.

Group of orthologs #2448. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 S.stipitis:125

G3J4I3              	100.00%		A3LZ32              	100.00%
Bootstrap support for G3J4I3 as seed ortholog is 100%.
Bootstrap support for A3LZ32 as seed ortholog is 100%.

Group of orthologs #2449. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 S.stipitis:125

G3J722              	100.00%		A3M0I6              	100.00%
Bootstrap support for G3J722 as seed ortholog is 100%.
Bootstrap support for A3M0I6 as seed ortholog is 100%.

Group of orthologs #2450. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 S.stipitis:125

G3JMV3              	100.00%		A3GHT0              	100.00%
Bootstrap support for G3JMV3 as seed ortholog is 100%.
Bootstrap support for A3GHT0 as seed ortholog is 100%.

Group of orthologs #2451. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 S.stipitis:125

G3JH69              	100.00%		A3LWB7              	100.00%
Bootstrap support for G3JH69 as seed ortholog is 100%.
Bootstrap support for A3LWB7 as seed ortholog is 100%.

Group of orthologs #2452. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3J8D9              	100.00%		A3LN18              	100.00%
Bootstrap support for G3J8D9 as seed ortholog is 100%.
Bootstrap support for A3LN18 as seed ortholog is 100%.

Group of orthologs #2453. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JD32              	100.00%		A3GF33              	100.00%
Bootstrap support for G3JD32 as seed ortholog is 100%.
Bootstrap support for A3GF33 as seed ortholog is 100%.

Group of orthologs #2454. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3J889              	100.00%		A3LPF4              	100.00%
Bootstrap support for G3J889 as seed ortholog is 100%.
Bootstrap support for A3LPF4 as seed ortholog is 100%.

Group of orthologs #2455. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JE92              	100.00%		A3GGA4              	100.00%
Bootstrap support for G3JE92 as seed ortholog is 100%.
Bootstrap support for A3GGA4 as seed ortholog is 100%.

Group of orthologs #2456. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:29 S.stipitis:124

G3J989              	100.00%		A3LS39              	100.00%
Bootstrap support for G3J989 as seed ortholog is 69%.
Alternative seed ortholog is G3JFQ6 (29 bits away from this cluster)
Bootstrap support for A3LS39 as seed ortholog is 100%.

Group of orthologs #2457. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JCR4              	100.00%		A3LV90              	100.00%
Bootstrap support for G3JCR4 as seed ortholog is 100%.
Bootstrap support for A3LV90 as seed ortholog is 100%.

Group of orthologs #2458. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JID7              	100.00%		A3LQX9              	100.00%
Bootstrap support for G3JID7 as seed ortholog is 100%.
Bootstrap support for A3LQX9 as seed ortholog is 100%.

Group of orthologs #2459. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JGS9              	100.00%		A3LUG9              	100.00%
Bootstrap support for G3JGS9 as seed ortholog is 100%.
Bootstrap support for A3LUG9 as seed ortholog is 100%.

Group of orthologs #2460. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JSP2              	100.00%		A3GFZ4              	100.00%
Bootstrap support for G3JSP2 as seed ortholog is 100%.
Bootstrap support for A3GFZ4 as seed ortholog is 100%.

Group of orthologs #2461. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JMA9              	100.00%		A3LRC2              	100.00%
Bootstrap support for G3JMA9 as seed ortholog is 100%.
Bootstrap support for A3LRC2 as seed ortholog is 100%.

Group of orthologs #2462. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JFV7              	100.00%		A3LZF5              	100.00%
Bootstrap support for G3JFV7 as seed ortholog is 100%.
Bootstrap support for A3LZF5 as seed ortholog is 100%.

Group of orthologs #2463. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JJZ5              	100.00%		A3M0N2              	100.00%
Bootstrap support for G3JJZ5 as seed ortholog is 100%.
Bootstrap support for A3M0N2 as seed ortholog is 100%.

Group of orthologs #2464. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 S.stipitis:124

G3JRZ3              	100.00%		A3LZN2              	100.00%
Bootstrap support for G3JRZ3 as seed ortholog is 100%.
Bootstrap support for A3LZN2 as seed ortholog is 100%.

Group of orthologs #2465. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:41 S.stipitis:124

G3JTC9              	100.00%		A3LZS8              	100.00%
Bootstrap support for G3JTC9 as seed ortholog is 81%.
Bootstrap support for A3LZS8 as seed ortholog is 100%.

Group of orthologs #2466. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JHY5              	100.00%		A3LV36              	100.00%
                    	       		A3GFS4              	10.82%
Bootstrap support for G3JHY5 as seed ortholog is 100%.
Bootstrap support for A3LV36 as seed ortholog is 100%.

Group of orthologs #2467. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:46

G3J2N5              	100.00%		A3LQD8              	100.00%
Bootstrap support for G3J2N5 as seed ortholog is 100%.
Bootstrap support for A3LQD8 as seed ortholog is 96%.

Group of orthologs #2468. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3J8R9              	100.00%		A3GGA1              	100.00%
Bootstrap support for G3J8R9 as seed ortholog is 100%.
Bootstrap support for A3GGA1 as seed ortholog is 100%.

Group of orthologs #2469. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JAR0              	100.00%		A3GFJ8              	100.00%
Bootstrap support for G3JAR0 as seed ortholog is 100%.
Bootstrap support for A3GFJ8 as seed ortholog is 100%.

Group of orthologs #2470. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3J4E0              	100.00%		A3LTH1              	100.00%
Bootstrap support for G3J4E0 as seed ortholog is 100%.
Bootstrap support for A3LTH1 as seed ortholog is 100%.

Group of orthologs #2471. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JD36              	100.00%		A3GGA3              	100.00%
Bootstrap support for G3JD36 as seed ortholog is 100%.
Bootstrap support for A3GGA3 as seed ortholog is 100%.

Group of orthologs #2472. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JH85              	100.00%		A3LQ44              	100.00%
Bootstrap support for G3JH85 as seed ortholog is 100%.
Bootstrap support for A3LQ44 as seed ortholog is 100%.

Group of orthologs #2473. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JFN7              	100.00%		A3LVU2              	100.00%
Bootstrap support for G3JFN7 as seed ortholog is 100%.
Bootstrap support for A3LVU2 as seed ortholog is 100%.

Group of orthologs #2474. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JDX2              	100.00%		A3LXM7              	100.00%
Bootstrap support for G3JDX2 as seed ortholog is 100%.
Bootstrap support for A3LXM7 as seed ortholog is 100%.

Group of orthologs #2475. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JET3              	100.00%		A3LY19              	100.00%
Bootstrap support for G3JET3 as seed ortholog is 100%.
Bootstrap support for A3LY19 as seed ortholog is 100%.

Group of orthologs #2476. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:42

G3JJ58              	100.00%		A3LX60              	100.00%
Bootstrap support for G3JJ58 as seed ortholog is 100%.
Bootstrap support for A3LX60 as seed ortholog is 71%.
Alternative seed ortholog is A3LR27 (42 bits away from this cluster)

Group of orthologs #2477. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JV26              	100.00%		A3GHV0              	100.00%
Bootstrap support for G3JV26 as seed ortholog is 100%.
Bootstrap support for A3GHV0 as seed ortholog is 100%.

Group of orthologs #2478. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JR04              	100.00%		A3LUZ1              	100.00%
Bootstrap support for G3JR04 as seed ortholog is 100%.
Bootstrap support for A3LUZ1 as seed ortholog is 100%.

Group of orthologs #2479. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 S.stipitis:123

G3JQG6              	100.00%		A3LVJ9              	100.00%
Bootstrap support for G3JQG6 as seed ortholog is 100%.
Bootstrap support for A3LVJ9 as seed ortholog is 100%.

Group of orthologs #2480. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:122

G3J6S5              	100.00%		A3GF31              	100.00%
Bootstrap support for G3J6S5 as seed ortholog is 100%.
Bootstrap support for A3GF31 as seed ortholog is 100%.

Group of orthologs #2481. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:122

G3J9G2              	100.00%		A3LW18              	100.00%
Bootstrap support for G3J9G2 as seed ortholog is 100%.
Bootstrap support for A3LW18 as seed ortholog is 100%.

Group of orthologs #2482. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:122

G3JIW6              	100.00%		A3LMS7              	100.00%
Bootstrap support for G3JIW6 as seed ortholog is 100%.
Bootstrap support for A3LMS7 as seed ortholog is 100%.

Group of orthologs #2483. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 S.stipitis:122

G3J9Z6              	100.00%		A3LYG5              	100.00%
Bootstrap support for G3J9Z6 as seed ortholog is 100%.
Bootstrap support for A3LYG5 as seed ortholog is 100%.

Group of orthologs #2484. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JAT2              	100.00%		A3LSC9              	100.00%
Bootstrap support for G3JAT2 as seed ortholog is 100%.
Bootstrap support for A3LSC9 as seed ortholog is 100%.

Group of orthologs #2485. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:66

G3J564              	100.00%		A3M099              	100.00%
Bootstrap support for G3J564 as seed ortholog is 100%.
Bootstrap support for A3M099 as seed ortholog is 99%.

Group of orthologs #2486. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JI83              	100.00%		A3LNE7              	100.00%
Bootstrap support for G3JI83 as seed ortholog is 100%.
Bootstrap support for A3LNE7 as seed ortholog is 100%.

Group of orthologs #2487. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JM30              	100.00%		A3GGS7              	100.00%
Bootstrap support for G3JM30 as seed ortholog is 100%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #2488. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JEK7              	100.00%		A3LU83              	100.00%
Bootstrap support for G3JEK7 as seed ortholog is 100%.
Bootstrap support for A3LU83 as seed ortholog is 100%.

Group of orthologs #2489. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JBB8              	100.00%		A3LZW7              	100.00%
Bootstrap support for G3JBB8 as seed ortholog is 100%.
Bootstrap support for A3LZW7 as seed ortholog is 100%.

Group of orthologs #2490. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JGK6              	100.00%		A3LZI7              	100.00%
Bootstrap support for G3JGK6 as seed ortholog is 100%.
Bootstrap support for A3LZI7 as seed ortholog is 100%.

Group of orthologs #2491. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JI86              	100.00%		A3LY32              	100.00%
Bootstrap support for G3JI86 as seed ortholog is 100%.
Bootstrap support for A3LY32 as seed ortholog is 100%.

Group of orthologs #2492. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 S.stipitis:121

G3JNU5              	100.00%		A3LZN0              	100.00%
Bootstrap support for G3JNU5 as seed ortholog is 100%.
Bootstrap support for A3LZN0 as seed ortholog is 100%.

Group of orthologs #2493. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:33 S.stipitis:6

G3JT55              	100.00%		A3GGI0              	100.00%
G3JHL3              	30.04%		A3LQR1              	27.24%
Bootstrap support for G3JT55 as seed ortholog is 78%.
Bootstrap support for A3GGI0 as seed ortholog is 55%.
Alternative seed ortholog is A3LQW4 (6 bits away from this cluster)

Group of orthologs #2494. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3J6I9              	100.00%		A3LW41              	100.00%
Bootstrap support for G3J6I9 as seed ortholog is 100%.
Bootstrap support for A3LW41 as seed ortholog is 100%.

Group of orthologs #2495. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3JII3              	100.00%		A3GFM9              	100.00%
Bootstrap support for G3JII3 as seed ortholog is 100%.
Bootstrap support for A3GFM9 as seed ortholog is 100%.

Group of orthologs #2496. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:74

G3J8D8              	100.00%		A3LVR9              	100.00%
Bootstrap support for G3J8D8 as seed ortholog is 100%.
Bootstrap support for A3LVR9 as seed ortholog is 96%.

Group of orthologs #2497. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3JHA6              	100.00%		A3LMX3              	100.00%
Bootstrap support for G3JHA6 as seed ortholog is 100%.
Bootstrap support for A3LMX3 as seed ortholog is 100%.

Group of orthologs #2498. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3JAW4              	100.00%		A3LWU5              	100.00%
Bootstrap support for G3JAW4 as seed ortholog is 100%.
Bootstrap support for A3LWU5 as seed ortholog is 100%.

Group of orthologs #2499. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3JKJ9              	100.00%		A3LR73              	100.00%
Bootstrap support for G3JKJ9 as seed ortholog is 100%.
Bootstrap support for A3LR73 as seed ortholog is 100%.

Group of orthologs #2500. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3JSR2              	100.00%		A3GFX1              	100.00%
Bootstrap support for G3JSR2 as seed ortholog is 100%.
Bootstrap support for A3GFX1 as seed ortholog is 100%.

Group of orthologs #2501. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 S.stipitis:120

G3JSR4              	100.00%		A3M0A6              	100.00%
Bootstrap support for G3JSR4 as seed ortholog is 100%.
Bootstrap support for A3M0A6 as seed ortholog is 100%.

Group of orthologs #2502. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3J974              	100.00%		A3GHQ4              	100.00%
Bootstrap support for G3J974 as seed ortholog is 100%.
Bootstrap support for A3GHQ4 as seed ortholog is 100%.

Group of orthologs #2503. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3J395              	100.00%		A3LY75              	100.00%
Bootstrap support for G3J395 as seed ortholog is 100%.
Bootstrap support for A3LY75 as seed ortholog is 100%.

Group of orthologs #2504. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3JDR5              	100.00%		A3LQS0              	100.00%
Bootstrap support for G3JDR5 as seed ortholog is 100%.
Bootstrap support for A3LQS0 as seed ortholog is 100%.

Group of orthologs #2505. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3J822              	100.00%		A3LXN6              	100.00%
Bootstrap support for G3J822 as seed ortholog is 100%.
Bootstrap support for A3LXN6 as seed ortholog is 100%.

Group of orthologs #2506. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3JL90              	100.00%		A3LPG7              	100.00%
Bootstrap support for G3JL90 as seed ortholog is 100%.
Bootstrap support for A3LPG7 as seed ortholog is 100%.

Group of orthologs #2507. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3JQW7              	100.00%		A3GGB9              	100.00%
Bootstrap support for G3JQW7 as seed ortholog is 100%.
Bootstrap support for A3GGB9 as seed ortholog is 100%.

Group of orthologs #2508. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3JHH8              	100.00%		A3LX70              	100.00%
Bootstrap support for G3JHH8 as seed ortholog is 100%.
Bootstrap support for A3LX70 as seed ortholog is 100%.

Group of orthologs #2509. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3JHN5              	100.00%		A3LZR7              	100.00%
Bootstrap support for G3JHN5 as seed ortholog is 100%.
Bootstrap support for A3LZR7 as seed ortholog is 100%.

Group of orthologs #2510. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 S.stipitis:119

G3JL49              	100.00%		A3M018              	100.00%
Bootstrap support for G3JL49 as seed ortholog is 100%.
Bootstrap support for A3M018 as seed ortholog is 100%.

Group of orthologs #2511. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3J4F1              	100.00%		A3LNN1              	100.00%
Bootstrap support for G3J4F1 as seed ortholog is 100%.
Bootstrap support for A3LNN1 as seed ortholog is 100%.

Group of orthologs #2512. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3J4P8              	100.00%		A3LSL8              	100.00%
Bootstrap support for G3J4P8 as seed ortholog is 100%.
Bootstrap support for A3LSL8 as seed ortholog is 100%.

Group of orthologs #2513. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3J7D4              	100.00%		A3LQU5              	100.00%
Bootstrap support for G3J7D4 as seed ortholog is 100%.
Bootstrap support for A3LQU5 as seed ortholog is 100%.

Group of orthologs #2514. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3J8F8              	100.00%		A3LQE9              	100.00%
Bootstrap support for G3J8F8 as seed ortholog is 100%.
Bootstrap support for A3LQE9 as seed ortholog is 100%.

Group of orthologs #2515. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JCX5              	100.00%		A3LP95              	100.00%
Bootstrap support for G3JCX5 as seed ortholog is 100%.
Bootstrap support for A3LP95 as seed ortholog is 100%.

Group of orthologs #2516. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JJ87              	100.00%		A3GFM7              	100.00%
Bootstrap support for G3JJ87 as seed ortholog is 100%.
Bootstrap support for A3GFM7 as seed ortholog is 100%.

Group of orthologs #2517. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JK82              	100.00%		A3GID0              	100.00%
Bootstrap support for G3JK82 as seed ortholog is 100%.
Bootstrap support for A3GID0 as seed ortholog is 100%.

Group of orthologs #2518. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JG63              	100.00%		A3LS82              	100.00%
Bootstrap support for G3JG63 as seed ortholog is 100%.
Bootstrap support for A3LS82 as seed ortholog is 100%.

Group of orthologs #2519. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JLF4              	100.00%		A3LPB5              	100.00%
Bootstrap support for G3JLF4 as seed ortholog is 100%.
Bootstrap support for A3LPB5 as seed ortholog is 100%.

Group of orthologs #2520. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JT77              	100.00%		A3GGY6              	100.00%
Bootstrap support for G3JT77 as seed ortholog is 100%.
Bootstrap support for A3GGY6 as seed ortholog is 100%.

Group of orthologs #2521. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JI81              	100.00%		A3LYQ4              	100.00%
Bootstrap support for G3JI81 as seed ortholog is 100%.
Bootstrap support for A3LYQ4 as seed ortholog is 100%.

Group of orthologs #2522. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JT19              	100.00%		A3LRD0              	100.00%
Bootstrap support for G3JT19 as seed ortholog is 100%.
Bootstrap support for A3LRD0 as seed ortholog is 100%.

Group of orthologs #2523. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 S.stipitis:118

G3JPW3              	100.00%		A3LYC6              	100.00%
Bootstrap support for G3JPW3 as seed ortholog is 100%.
Bootstrap support for A3LYC6 as seed ortholog is 100%.

Group of orthologs #2524. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:117

G3JMH3              	100.00%		A3GHH7              	100.00%
                    	       		A3LSH5              	30.34%
Bootstrap support for G3JMH3 as seed ortholog is 100%.
Bootstrap support for A3GHH7 as seed ortholog is 100%.

Group of orthologs #2525. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:117

G3J3U4              	100.00%		A3GGY4              	100.00%
Bootstrap support for G3J3U4 as seed ortholog is 100%.
Bootstrap support for A3GGY4 as seed ortholog is 100%.

Group of orthologs #2526. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:117

G3J3U8              	100.00%		A3LPJ0              	100.00%
Bootstrap support for G3J3U8 as seed ortholog is 100%.
Bootstrap support for A3LPJ0 as seed ortholog is 100%.

Group of orthologs #2527. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 S.stipitis:117

G3JSG3              	100.00%		A3LW30              	100.00%
Bootstrap support for G3JSG3 as seed ortholog is 100%.
Bootstrap support for A3LW30 as seed ortholog is 100%.

Group of orthologs #2528. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:20 S.stipitis:116

G3JS08              	100.00%		A3LUP3              	100.00%
                    	       		A3LZN5              	100.00%
                    	       		A3LWN6              	63.91%
                    	       		A3LWN1              	42.41%
                    	       		A3LUQ2              	32.82%
Bootstrap support for G3JS08 as seed ortholog is 59%.
Alternative seed ortholog is G3JT36 (20 bits away from this cluster)
Bootstrap support for A3LUP3 as seed ortholog is 100%.
Bootstrap support for A3LZN5 as seed ortholog is 100%.

Group of orthologs #2529. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3J9H6              	100.00%		A3GF03              	100.00%
Bootstrap support for G3J9H6 as seed ortholog is 100%.
Bootstrap support for A3GF03 as seed ortholog is 100%.

Group of orthologs #2530. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3J7V4              	100.00%		A3LQF0              	100.00%
Bootstrap support for G3J7V4 as seed ortholog is 100%.
Bootstrap support for A3LQF0 as seed ortholog is 100%.

Group of orthologs #2531. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3J8N7              	100.00%		A3LWW9              	100.00%
Bootstrap support for G3J8N7 as seed ortholog is 100%.
Bootstrap support for A3LWW9 as seed ortholog is 100%.

Group of orthologs #2532. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3JEZ6              	100.00%		A3LQZ4              	100.00%
Bootstrap support for G3JEZ6 as seed ortholog is 100%.
Bootstrap support for A3LQZ4 as seed ortholog is 100%.

Group of orthologs #2533. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3JE74              	100.00%		A3LV00              	100.00%
Bootstrap support for G3JE74 as seed ortholog is 100%.
Bootstrap support for A3LV00 as seed ortholog is 100%.

Group of orthologs #2534. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3JPI8              	100.00%		A3LQA9              	100.00%
Bootstrap support for G3JPI8 as seed ortholog is 100%.
Bootstrap support for A3LQA9 as seed ortholog is 100%.

Group of orthologs #2535. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3JQR6              	100.00%		A3LSV8              	100.00%
Bootstrap support for G3JQR6 as seed ortholog is 100%.
Bootstrap support for A3LSV8 as seed ortholog is 100%.

Group of orthologs #2536. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 S.stipitis:116

G3JNL9              	100.00%		A3LWK9              	100.00%
Bootstrap support for G3JNL9 as seed ortholog is 100%.
Bootstrap support for A3LWK9 as seed ortholog is 100%.

Group of orthologs #2537. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 S.stipitis:115

G3J3D8              	100.00%		A3GFT8              	100.00%
Bootstrap support for G3J3D8 as seed ortholog is 100%.
Bootstrap support for A3GFT8 as seed ortholog is 100%.

Group of orthologs #2538. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 S.stipitis:115

G3J4P0              	100.00%		A3LSN4              	100.00%
Bootstrap support for G3J4P0 as seed ortholog is 100%.
Bootstrap support for A3LSN4 as seed ortholog is 100%.

Group of orthologs #2539. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 S.stipitis:115

G3JA10              	100.00%		A3M0B1              	100.00%
Bootstrap support for G3JA10 as seed ortholog is 100%.
Bootstrap support for A3M0B1 as seed ortholog is 100%.

Group of orthologs #2540. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 S.stipitis:115

G3JGJ6              	100.00%		A3LW16              	100.00%
Bootstrap support for G3JGJ6 as seed ortholog is 100%.
Bootstrap support for A3LW16 as seed ortholog is 100%.

Group of orthologs #2541. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 S.stipitis:115

G3JGX2              	100.00%		A3LVT0              	100.00%
Bootstrap support for G3JGX2 as seed ortholog is 100%.
Bootstrap support for A3LVT0 as seed ortholog is 100%.

Group of orthologs #2542. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 S.stipitis:114

G3JDP5              	100.00%		A3GF00              	100.00%
Bootstrap support for G3JDP5 as seed ortholog is 100%.
Bootstrap support for A3GF00 as seed ortholog is 100%.

Group of orthologs #2543. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 S.stipitis:114

G3JN67              	100.00%		A3LUS2              	100.00%
Bootstrap support for G3JN67 as seed ortholog is 100%.
Bootstrap support for A3LUS2 as seed ortholog is 100%.

Group of orthologs #2544. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 S.stipitis:114

G3JU25              	100.00%		A3LSW9              	100.00%
Bootstrap support for G3JU25 as seed ortholog is 100%.
Bootstrap support for A3LSW9 as seed ortholog is 100%.

Group of orthologs #2545. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:113

G3JBM5              	100.00%		A3LWA3              	100.00%
                    	       		A3LQP4              	83.33%
Bootstrap support for G3JBM5 as seed ortholog is 100%.
Bootstrap support for A3LWA3 as seed ortholog is 100%.

Group of orthologs #2546. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:9

G3J9T0              	100.00%		A3GGN9              	100.00%
Bootstrap support for G3J9T0 as seed ortholog is 100%.
Bootstrap support for A3GGN9 as seed ortholog is 61%.
Alternative seed ortholog is A3LPG2 (9 bits away from this cluster)

Group of orthologs #2547. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:113

G3JDP8              	100.00%		A3LPJ1              	100.00%
Bootstrap support for G3JDP8 as seed ortholog is 100%.
Bootstrap support for A3LPJ1 as seed ortholog is 100%.

Group of orthologs #2548. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:113

G3JGJ8              	100.00%		A3LUY1              	100.00%
Bootstrap support for G3JGJ8 as seed ortholog is 100%.
Bootstrap support for A3LUY1 as seed ortholog is 100%.

Group of orthologs #2549. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:113

G3JR73              	100.00%		A3LT09              	100.00%
Bootstrap support for G3JR73 as seed ortholog is 100%.
Bootstrap support for A3LT09 as seed ortholog is 100%.

Group of orthologs #2550. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 S.stipitis:113

G3JQG3              	100.00%		A3LU61              	100.00%
Bootstrap support for G3JQG3 as seed ortholog is 100%.
Bootstrap support for A3LU61 as seed ortholog is 100%.

Group of orthologs #2551. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:31 S.stipitis:44

G3JRA0              	100.00%		A3M0N7              	100.00%
                    	       		A3LSQ8              	41.49%
Bootstrap support for G3JRA0 as seed ortholog is 71%.
Alternative seed ortholog is G3JLS8 (31 bits away from this cluster)
Bootstrap support for A3M0N7 as seed ortholog is 78%.

Group of orthologs #2552. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 S.stipitis:112

G3J8Z4              	100.00%		A3GEY6              	100.00%
Bootstrap support for G3J8Z4 as seed ortholog is 100%.
Bootstrap support for A3GEY6 as seed ortholog is 100%.

Group of orthologs #2553. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 S.stipitis:112

G3J4E9              	100.00%		A3LR96              	100.00%
Bootstrap support for G3J4E9 as seed ortholog is 100%.
Bootstrap support for A3LR96 as seed ortholog is 100%.

Group of orthologs #2554. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 S.stipitis:112

G3J510              	100.00%		A3LSB8              	100.00%
Bootstrap support for G3J510 as seed ortholog is 100%.
Bootstrap support for A3LSB8 as seed ortholog is 100%.

Group of orthologs #2555. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 S.stipitis:112

G3JM87              	100.00%		A3GF64              	100.00%
Bootstrap support for G3JM87 as seed ortholog is 100%.
Bootstrap support for A3GF64 as seed ortholog is 100%.

Group of orthologs #2556. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3J3W5              	100.00%		A3LP63              	100.00%
Bootstrap support for G3J3W5 as seed ortholog is 100%.
Bootstrap support for A3LP63 as seed ortholog is 100%.

Group of orthologs #2557. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JBX0              	100.00%		A3GHG5              	100.00%
Bootstrap support for G3JBX0 as seed ortholog is 100%.
Bootstrap support for A3GHG5 as seed ortholog is 100%.

Group of orthologs #2558. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3J7I8              	100.00%		A3LSL9              	100.00%
Bootstrap support for G3J7I8 as seed ortholog is 100%.
Bootstrap support for A3LSL9 as seed ortholog is 100%.

Group of orthologs #2559. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3J7K7              	100.00%		A3LTC9              	100.00%
Bootstrap support for G3J7K7 as seed ortholog is 100%.
Bootstrap support for A3LTC9 as seed ortholog is 100%.

Group of orthologs #2560. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JFP0              	100.00%		A3LNI2              	100.00%
Bootstrap support for G3JFP0 as seed ortholog is 100%.
Bootstrap support for A3LNI2 as seed ortholog is 100%.

Group of orthologs #2561. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JE73              	100.00%		A3LRA9              	100.00%
Bootstrap support for G3JE73 as seed ortholog is 100%.
Bootstrap support for A3LRA9 as seed ortholog is 100%.

Group of orthologs #2562. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:111

G3JMF2              	100.00%		A3GF77              	100.00%
Bootstrap support for G3JMF2 as seed ortholog is 83%.
Bootstrap support for A3GF77 as seed ortholog is 100%.

Group of orthologs #2563. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3J7Y7              	100.00%		A3LZZ4              	100.00%
Bootstrap support for G3J7Y7 as seed ortholog is 100%.
Bootstrap support for A3LZZ4 as seed ortholog is 100%.

Group of orthologs #2564. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3J7S4              	100.00%		A3M0I0              	100.00%
Bootstrap support for G3J7S4 as seed ortholog is 100%.
Bootstrap support for A3M0I0 as seed ortholog is 100%.

Group of orthologs #2565. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JAB1              	100.00%		A3LZA9              	100.00%
Bootstrap support for G3JAB1 as seed ortholog is 100%.
Bootstrap support for A3LZA9 as seed ortholog is 100%.

Group of orthologs #2566. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JQ17              	100.00%		A3GFJ3              	100.00%
Bootstrap support for G3JQ17 as seed ortholog is 100%.
Bootstrap support for A3GFJ3 as seed ortholog is 100%.

Group of orthologs #2567. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JES3              	100.00%		A3LVR4              	100.00%
Bootstrap support for G3JES3 as seed ortholog is 100%.
Bootstrap support for A3LVR4 as seed ortholog is 100%.

Group of orthologs #2568. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 S.stipitis:111

G3JR97              	100.00%		A3LPE8              	100.00%
Bootstrap support for G3JR97 as seed ortholog is 100%.
Bootstrap support for A3LPE8 as seed ortholog is 100%.

Group of orthologs #2569. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:23 S.stipitis:110

G3JLG5              	100.00%		A3GG80              	100.00%
                    	       		A3LUV6              	100.00%
Bootstrap support for G3JLG5 as seed ortholog is 68%.
Alternative seed ortholog is G3JP47 (23 bits away from this cluster)
Bootstrap support for A3GG80 as seed ortholog is 100%.
Bootstrap support for A3LUV6 as seed ortholog is 100%.

Group of orthologs #2570. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3J3Z5              	100.00%		A3GF67              	100.00%
Bootstrap support for G3J3Z5 as seed ortholog is 100%.
Bootstrap support for A3GF67 as seed ortholog is 100%.

Group of orthologs #2571. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3J836              	100.00%		A3LP05              	100.00%
Bootstrap support for G3J836 as seed ortholog is 100%.
Bootstrap support for A3LP05 as seed ortholog is 100%.

Group of orthologs #2572. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3J4L1              	100.00%		A3LVB8              	100.00%
Bootstrap support for G3J4L1 as seed ortholog is 100%.
Bootstrap support for A3LVB8 as seed ortholog is 100%.

Group of orthologs #2573. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JCY1              	100.00%		A3LNE5              	100.00%
Bootstrap support for G3JCY1 as seed ortholog is 100%.
Bootstrap support for A3LNE5 as seed ortholog is 100%.

Group of orthologs #2574. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JJC4              	100.00%		A3GEX6              	100.00%
Bootstrap support for G3JJC4 as seed ortholog is 100%.
Bootstrap support for A3GEX6 as seed ortholog is 100%.

Group of orthologs #2575. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JJQ7              	100.00%		A3GGI8              	100.00%
Bootstrap support for G3JJQ7 as seed ortholog is 100%.
Bootstrap support for A3GGI8 as seed ortholog is 100%.

Group of orthologs #2576. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JFY2              	100.00%		A3LV98              	100.00%
Bootstrap support for G3JFY2 as seed ortholog is 100%.
Bootstrap support for A3LV98 as seed ortholog is 100%.

Group of orthologs #2577. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JSK6              	100.00%		A3LN93              	100.00%
Bootstrap support for G3JSK6 as seed ortholog is 100%.
Bootstrap support for A3LN93 as seed ortholog is 100%.

Group of orthologs #2578. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JI48              	100.00%		A3LZ74              	100.00%
Bootstrap support for G3JI48 as seed ortholog is 100%.
Bootstrap support for A3LZ74 as seed ortholog is 100%.

Group of orthologs #2579. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JU83              	100.00%		A3LN73              	100.00%
Bootstrap support for G3JU83 as seed ortholog is 100%.
Bootstrap support for A3LN73 as seed ortholog is 100%.

Group of orthologs #2580. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JTM4              	100.00%		A3LP92              	100.00%
Bootstrap support for G3JTM4 as seed ortholog is 100%.
Bootstrap support for A3LP92 as seed ortholog is 100%.

Group of orthologs #2581. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JUN3              	100.00%		A3LXH0              	100.00%
Bootstrap support for G3JUN3 as seed ortholog is 100%.
Bootstrap support for A3LXH0 as seed ortholog is 100%.

Group of orthologs #2582. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 S.stipitis:110

G3JTH1              	100.00%		A3LYR9              	100.00%
Bootstrap support for G3JTH1 as seed ortholog is 100%.
Bootstrap support for A3LYR9 as seed ortholog is 100%.

Group of orthologs #2583. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:34 S.stipitis:109

G3JCY2              	100.00%		A3LTU5              	100.00%
G3JDM6              	9.57%		
Bootstrap support for G3JCY2 as seed ortholog is 82%.
Bootstrap support for A3LTU5 as seed ortholog is 100%.

Group of orthologs #2584. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JC56              	100.00%		A3LVP7              	100.00%
G3JK84              	16.52%		
Bootstrap support for G3JC56 as seed ortholog is 100%.
Bootstrap support for A3LVP7 as seed ortholog is 100%.

Group of orthologs #2585. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JNE2              	100.00%		A3LY81              	100.00%
G3JAM4              	8.07%		
Bootstrap support for G3JNE2 as seed ortholog is 100%.
Bootstrap support for A3LY81 as seed ortholog is 100%.

Group of orthologs #2586. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3J810              	100.00%		A3LQ32              	100.00%
Bootstrap support for G3J810 as seed ortholog is 100%.
Bootstrap support for A3LQ32 as seed ortholog is 100%.

Group of orthologs #2587. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3J302              	100.00%		A3LVB9              	100.00%
Bootstrap support for G3J302 as seed ortholog is 100%.
Bootstrap support for A3LVB9 as seed ortholog is 100%.

Group of orthologs #2588. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JDT3              	100.00%		A3GHE8              	100.00%
Bootstrap support for G3JDT3 as seed ortholog is 100%.
Bootstrap support for A3GHE8 as seed ortholog is 100%.

Group of orthologs #2589. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3J823              	100.00%		A3LSJ1              	100.00%
Bootstrap support for G3J823 as seed ortholog is 100%.
Bootstrap support for A3LSJ1 as seed ortholog is 100%.

Group of orthologs #2590. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3J2N4              	100.00%		A3LYQ3              	100.00%
Bootstrap support for G3J2N4 as seed ortholog is 100%.
Bootstrap support for A3LYQ3 as seed ortholog is 100%.

Group of orthologs #2591. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3J8B4              	100.00%		A3LUG3              	100.00%
Bootstrap support for G3J8B4 as seed ortholog is 100%.
Bootstrap support for A3LUG3 as seed ortholog is 100%.

Group of orthologs #2592. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3J7A4              	100.00%		A3LVP3              	100.00%
Bootstrap support for G3J7A4 as seed ortholog is 100%.
Bootstrap support for A3LVP3 as seed ortholog is 100%.

Group of orthologs #2593. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JCE4              	100.00%		A3LR98              	100.00%
Bootstrap support for G3JCE4 as seed ortholog is 100%.
Bootstrap support for A3LR98 as seed ortholog is 100%.

Group of orthologs #2594. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JKW1              	100.00%		A3GFP8              	100.00%
Bootstrap support for G3JKW1 as seed ortholog is 100%.
Bootstrap support for A3GFP8 as seed ortholog is 100%.

Group of orthologs #2595. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JGC6              	100.00%		A3LPL4              	100.00%
Bootstrap support for G3JGC6 as seed ortholog is 100%.
Bootstrap support for A3LPL4 as seed ortholog is 100%.

Group of orthologs #2596. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JLX1              	100.00%		A3LMY6              	100.00%
Bootstrap support for G3JLX1 as seed ortholog is 100%.
Bootstrap support for A3LMY6 as seed ortholog is 100%.

Group of orthologs #2597. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JN32              	100.00%		A3LNK8              	100.00%
Bootstrap support for G3JN32 as seed ortholog is 100%.
Bootstrap support for A3LNK8 as seed ortholog is 100%.

Group of orthologs #2598. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JRZ8              	100.00%		A3GGY7              	100.00%
Bootstrap support for G3JRZ8 as seed ortholog is 100%.
Bootstrap support for A3GGY7 as seed ortholog is 100%.

Group of orthologs #2599. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JPS0              	100.00%		A3LRX0              	100.00%
Bootstrap support for G3JPS0 as seed ortholog is 100%.
Bootstrap support for A3LRX0 as seed ortholog is 100%.

Group of orthologs #2600. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JNA5              	100.00%		A3LTW0              	100.00%
Bootstrap support for G3JNA5 as seed ortholog is 100%.
Bootstrap support for A3LTW0 as seed ortholog is 100%.

Group of orthologs #2601. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 S.stipitis:109

G3JPQ2              	100.00%		A3LW39              	100.00%
Bootstrap support for G3JPQ2 as seed ortholog is 100%.
Bootstrap support for A3LW39 as seed ortholog is 100%.

Group of orthologs #2602. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3J5X4              	100.00%		A3LQ75              	100.00%
                    	       		A3LR31              	29.46%
                    	       		A3GI87              	5.82%
Bootstrap support for G3J5X4 as seed ortholog is 100%.
Bootstrap support for A3LQ75 as seed ortholog is 100%.

Group of orthologs #2603. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:30 S.stipitis:108

G3JBW2              	100.00%		A3GFL4              	100.00%
G3J6P1              	8.61%		
Bootstrap support for G3JBW2 as seed ortholog is 78%.
Bootstrap support for A3GFL4 as seed ortholog is 100%.

Group of orthologs #2604. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3J3H1              	100.00%		A3LPM5              	100.00%
Bootstrap support for G3J3H1 as seed ortholog is 100%.
Bootstrap support for A3LPM5 as seed ortholog is 100%.

Group of orthologs #2605. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JBV5              	100.00%		A3GGF4              	100.00%
Bootstrap support for G3JBV5 as seed ortholog is 100%.
Bootstrap support for A3GGF4 as seed ortholog is 100%.

Group of orthologs #2606. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JCX9              	100.00%		A3LNS8              	100.00%
Bootstrap support for G3JCX9 as seed ortholog is 100%.
Bootstrap support for A3LNS8 as seed ortholog is 100%.

Group of orthologs #2607. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JGN9              	100.00%		A3LPS1              	100.00%
Bootstrap support for G3JGN9 as seed ortholog is 100%.
Bootstrap support for A3LPS1 as seed ortholog is 100%.

Group of orthologs #2608. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JFT5              	100.00%		A3LRK7              	100.00%
Bootstrap support for G3JFT5 as seed ortholog is 100%.
Bootstrap support for A3LRK7 as seed ortholog is 100%.

Group of orthologs #2609. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:39 S.stipitis:108

G3JDW1              	100.00%		A3LW06              	100.00%
Bootstrap support for G3JDW1 as seed ortholog is 84%.
Bootstrap support for A3LW06 as seed ortholog is 100%.

Group of orthologs #2610. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JGE2              	100.00%		A3LUV1              	100.00%
Bootstrap support for G3JGE2 as seed ortholog is 100%.
Bootstrap support for A3LUV1 as seed ortholog is 100%.

Group of orthologs #2611. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JMJ8              	100.00%		A3LPW3              	100.00%
Bootstrap support for G3JMJ8 as seed ortholog is 100%.
Bootstrap support for A3LPW3 as seed ortholog is 100%.

Group of orthologs #2612. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JJM6              	100.00%		A3LVK8              	100.00%
Bootstrap support for G3JJM6 as seed ortholog is 100%.
Bootstrap support for A3LVK8 as seed ortholog is 100%.

Group of orthologs #2613. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 S.stipitis:108

G3JN05              	100.00%		A3LT64              	100.00%
Bootstrap support for G3JN05 as seed ortholog is 100%.
Bootstrap support for A3LT64 as seed ortholog is 100%.

Group of orthologs #2614. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JN99              	100.00%		A3LTK7              	100.00%
G3JNW3              	42.86%		A3LTK6              	38.11%
Bootstrap support for G3JN99 as seed ortholog is 100%.
Bootstrap support for A3LTK7 as seed ortholog is 100%.

Group of orthologs #2615. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JCM5              	100.00%		A3GGX1              	100.00%
Bootstrap support for G3JCM5 as seed ortholog is 100%.
Bootstrap support for A3GGX1 as seed ortholog is 100%.

Group of orthologs #2616. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JAG7              	100.00%		A3LV28              	100.00%
Bootstrap support for G3JAG7 as seed ortholog is 100%.
Bootstrap support for A3LV28 as seed ortholog is 100%.

Group of orthologs #2617. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3J795              	100.00%		A3LZM5              	100.00%
Bootstrap support for G3J795 as seed ortholog is 100%.
Bootstrap support for A3LZM5 as seed ortholog is 100%.

Group of orthologs #2618. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JHI1              	100.00%		A3LPF0              	100.00%
Bootstrap support for G3JHI1 as seed ortholog is 100%.
Bootstrap support for A3LPF0 as seed ortholog is 100%.

Group of orthologs #2619. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JN45              	100.00%		A3GFT9              	100.00%
Bootstrap support for G3JN45 as seed ortholog is 100%.
Bootstrap support for A3GFT9 as seed ortholog is 100%.

Group of orthologs #2620. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JL87              	100.00%		A3LR64              	100.00%
Bootstrap support for G3JL87 as seed ortholog is 100%.
Bootstrap support for A3LR64 as seed ortholog is 100%.

Group of orthologs #2621. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JF29              	100.00%		A3LXS5              	100.00%
Bootstrap support for G3JF29 as seed ortholog is 100%.
Bootstrap support for A3LXS5 as seed ortholog is 100%.

Group of orthologs #2622. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JM70              	100.00%		A3LUC0              	100.00%
Bootstrap support for G3JM70 as seed ortholog is 100%.
Bootstrap support for A3LUC0 as seed ortholog is 100%.

Group of orthologs #2623. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JIG9              	100.00%		A3M0M7              	100.00%
Bootstrap support for G3JIG9 as seed ortholog is 100%.
Bootstrap support for A3M0M7 as seed ortholog is 100%.

Group of orthologs #2624. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 S.stipitis:107

G3JU82              	100.00%		A3LWF5              	100.00%
Bootstrap support for G3JU82 as seed ortholog is 100%.
Bootstrap support for A3LWF5 as seed ortholog is 100%.

Group of orthologs #2625. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JBU4              	100.00%		A3LNE8              	100.00%
Bootstrap support for G3JBU4 as seed ortholog is 100%.
Bootstrap support for A3LNE8 as seed ortholog is 100%.

Group of orthologs #2626. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JAC7              	100.00%		A3LRH8              	100.00%
Bootstrap support for G3JAC7 as seed ortholog is 100%.
Bootstrap support for A3LRH8 as seed ortholog is 100%.

Group of orthologs #2627. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:64 S.stipitis:106

G3JAL0              	100.00%		A3LUU2              	100.00%
Bootstrap support for G3JAL0 as seed ortholog is 99%.
Bootstrap support for A3LUU2 as seed ortholog is 100%.

Group of orthologs #2628. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JD85              	100.00%		A3LS98              	100.00%
Bootstrap support for G3JD85 as seed ortholog is 100%.
Bootstrap support for A3LS98 as seed ortholog is 100%.

Group of orthologs #2629. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JHP6              	100.00%		A3LMY1              	100.00%
Bootstrap support for G3JHP6 as seed ortholog is 100%.
Bootstrap support for A3LMY1 as seed ortholog is 100%.

Group of orthologs #2630. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3J6M5              	100.00%		A3LZW1              	100.00%
Bootstrap support for G3J6M5 as seed ortholog is 100%.
Bootstrap support for A3LZW1 as seed ortholog is 100%.

Group of orthologs #2631. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JP32              	100.00%		A3GGE0              	100.00%
Bootstrap support for G3JP32 as seed ortholog is 100%.
Bootstrap support for A3GGE0 as seed ortholog is 100%.

Group of orthologs #2632. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JUZ8              	100.00%		A3LQB8              	100.00%
Bootstrap support for G3JUZ8 as seed ortholog is 100%.
Bootstrap support for A3LQB8 as seed ortholog is 100%.

Group of orthologs #2633. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JRR4              	100.00%		A3LVT7              	100.00%
Bootstrap support for G3JRR4 as seed ortholog is 100%.
Bootstrap support for A3LVT7 as seed ortholog is 100%.

Group of orthologs #2634. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JQZ3              	100.00%		A3M0C5              	100.00%
Bootstrap support for G3JQZ3 as seed ortholog is 100%.
Bootstrap support for A3M0C5 as seed ortholog is 100%.

Group of orthologs #2635. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 S.stipitis:106

G3JQX1              	100.00%		A3M0H5              	100.00%
Bootstrap support for G3JQX1 as seed ortholog is 100%.
Bootstrap support for A3M0H5 as seed ortholog is 100%.

Group of orthologs #2636. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:48

G3J961              	100.00%		A3LT32              	100.00%
                    	       		A3LT31              	11.04%
Bootstrap support for G3J961 as seed ortholog is 100%.
Bootstrap support for A3LT32 as seed ortholog is 62%.
Alternative seed ortholog is A3LT30 (48 bits away from this cluster)

Group of orthologs #2637. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3JJI9              	100.00%		A3LXD3              	100.00%
G3JQ19              	6.47%		
Bootstrap support for G3JJI9 as seed ortholog is 100%.
Bootstrap support for A3LXD3 as seed ortholog is 100%.

Group of orthologs #2638. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3J3Q2              	100.00%		A3LPV2              	100.00%
Bootstrap support for G3J3Q2 as seed ortholog is 100%.
Bootstrap support for A3LPV2 as seed ortholog is 100%.

Group of orthologs #2639. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3JBG1              	100.00%		A3GI86              	100.00%
Bootstrap support for G3JBG1 as seed ortholog is 100%.
Bootstrap support for A3GI86 as seed ortholog is 100%.

Group of orthologs #2640. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3JGC3              	100.00%		A3LU24              	100.00%
Bootstrap support for G3JGC3 as seed ortholog is 100%.
Bootstrap support for A3LU24 as seed ortholog is 100%.

Group of orthologs #2641. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3JT29              	100.00%		A3GET2              	100.00%
Bootstrap support for G3JT29 as seed ortholog is 100%.
Bootstrap support for A3GET2 as seed ortholog is 100%.

Group of orthologs #2642. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:40 S.stipitis:105

G3JHQ4              	100.00%		A3LVV3              	100.00%
Bootstrap support for G3JHQ4 as seed ortholog is 83%.
Bootstrap support for A3LVV3 as seed ortholog is 100%.

Group of orthologs #2643. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3JU77              	100.00%		A3GI53              	100.00%
Bootstrap support for G3JU77 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #2644. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 S.stipitis:105

G3JP97              	100.00%		A3LZG5              	100.00%
Bootstrap support for G3JP97 as seed ortholog is 100%.
Bootstrap support for A3LZG5 as seed ortholog is 100%.

Group of orthologs #2645. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:29 S.stipitis:104

G3JH28              	100.00%		A3GFW0              	100.00%
G3JMF5              	8.52%		
Bootstrap support for G3JH28 as seed ortholog is 90%.
Bootstrap support for A3GFW0 as seed ortholog is 100%.

Group of orthologs #2646. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:104

G3JMB5              	100.00%		A3LQL7              	100.00%
G3J806              	15.29%		
Bootstrap support for G3JMB5 as seed ortholog is 100%.
Bootstrap support for A3LQL7 as seed ortholog is 100%.

Group of orthologs #2647. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:104

G3J588              	100.00%		A3LNW4              	100.00%
Bootstrap support for G3J588 as seed ortholog is 100%.
Bootstrap support for A3LNW4 as seed ortholog is 100%.

Group of orthologs #2648. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:104

G3JJ19              	100.00%		A3GHM4              	100.00%
Bootstrap support for G3JJ19 as seed ortholog is 100%.
Bootstrap support for A3GHM4 as seed ortholog is 100%.

Group of orthologs #2649. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:104

G3JAP3              	100.00%		A3LVD9              	100.00%
Bootstrap support for G3JAP3 as seed ortholog is 100%.
Bootstrap support for A3LVD9 as seed ortholog is 100%.

Group of orthologs #2650. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:104

G3JG58              	100.00%		A3LTR9              	100.00%
Bootstrap support for G3JG58 as seed ortholog is 100%.
Bootstrap support for A3LTR9 as seed ortholog is 100%.

Group of orthologs #2651. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:104

G3JJE6              	100.00%		A3LS91              	100.00%
Bootstrap support for G3JJE6 as seed ortholog is 100%.
Bootstrap support for A3LS91 as seed ortholog is 100%.

Group of orthologs #2652. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 S.stipitis:39

G3JS65              	100.00%		A3LXE0              	100.00%
Bootstrap support for G3JS65 as seed ortholog is 100%.
Bootstrap support for A3LXE0 as seed ortholog is 86%.

Group of orthologs #2653. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3J772              	100.00%		A3LXI3              	100.00%
                    	       		A3LQM9              	17.78%
Bootstrap support for G3J772 as seed ortholog is 100%.
Bootstrap support for A3LXI3 as seed ortholog is 100%.

Group of orthologs #2654. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:9 S.stipitis:103

G3JPG0              	100.00%		A3LWR6              	100.00%
                    	       		A3LWS7              	20.69%
Bootstrap support for G3JPG0 as seed ortholog is 68%.
Alternative seed ortholog is G3JF57 (9 bits away from this cluster)
Bootstrap support for A3LWR6 as seed ortholog is 100%.

Group of orthologs #2655. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JAB4              	100.00%		A3GH93              	100.00%
Bootstrap support for G3JAB4 as seed ortholog is 100%.
Bootstrap support for A3GH93 as seed ortholog is 100%.

Group of orthologs #2656. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JE85              	100.00%		A3LQ09              	100.00%
Bootstrap support for G3JE85 as seed ortholog is 100%.
Bootstrap support for A3LQ09 as seed ortholog is 100%.

Group of orthologs #2657. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JJV4              	100.00%		A3GIA9              	100.00%
Bootstrap support for G3JJV4 as seed ortholog is 100%.
Bootstrap support for A3GIA9 as seed ortholog is 100%.

Group of orthologs #2658. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JI58              	100.00%		A3LQN0              	100.00%
Bootstrap support for G3JI58 as seed ortholog is 100%.
Bootstrap support for A3LQN0 as seed ortholog is 100%.

Group of orthologs #2659. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JI32              	100.00%		A3LRV1              	100.00%
Bootstrap support for G3JI32 as seed ortholog is 100%.
Bootstrap support for A3LRV1 as seed ortholog is 100%.

Group of orthologs #2660. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JD98              	100.00%		A3LY08              	100.00%
Bootstrap support for G3JD98 as seed ortholog is 100%.
Bootstrap support for A3LY08 as seed ortholog is 100%.

Group of orthologs #2661. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 S.stipitis:103

G3JQP0              	100.00%		A3LSJ4              	100.00%
Bootstrap support for G3JQP0 as seed ortholog is 100%.
Bootstrap support for A3LSJ4 as seed ortholog is 100%.

Group of orthologs #2662. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3J338              	100.00%		A3GGN8              	100.00%
Bootstrap support for G3J338 as seed ortholog is 100%.
Bootstrap support for A3GGN8 as seed ortholog is 100%.

Group of orthologs #2663. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JD54              	100.00%		A3GGF7              	100.00%
Bootstrap support for G3JD54 as seed ortholog is 100%.
Bootstrap support for A3GGF7 as seed ortholog is 100%.

Group of orthologs #2664. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JHA4              	100.00%		A3GEU6              	100.00%
Bootstrap support for G3JHA4 as seed ortholog is 100%.
Bootstrap support for A3GEU6 as seed ortholog is 100%.

Group of orthologs #2665. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JBN3              	100.00%		A3LSJ6              	100.00%
Bootstrap support for G3JBN3 as seed ortholog is 100%.
Bootstrap support for A3LSJ6 as seed ortholog is 100%.

Group of orthologs #2666. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JHX7              	100.00%		A3LPV9              	100.00%
Bootstrap support for G3JHX7 as seed ortholog is 100%.
Bootstrap support for A3LPV9 as seed ortholog is 100%.

Group of orthologs #2667. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JLE4              	100.00%		A3LNR2              	100.00%
Bootstrap support for G3JLE4 as seed ortholog is 100%.
Bootstrap support for A3LNR2 as seed ortholog is 100%.

Group of orthologs #2668. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:11 S.stipitis:102

G3JSU6              	100.00%		A3GG90              	100.00%
Bootstrap support for G3JSU6 as seed ortholog is 40%.
Alternative seed ortholog is G3JFQ6 (11 bits away from this cluster)
Bootstrap support for A3GG90 as seed ortholog is 100%.

Group of orthologs #2669. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JJP2              	100.00%		A3LV27              	100.00%
Bootstrap support for G3JJP2 as seed ortholog is 100%.
Bootstrap support for A3LV27 as seed ortholog is 100%.

Group of orthologs #2670. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 S.stipitis:102

G3JRH6              	100.00%		A3LZ04              	100.00%
Bootstrap support for G3JRH6 as seed ortholog is 100%.
Bootstrap support for A3LZ04 as seed ortholog is 100%.

Group of orthologs #2671. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:6 S.stipitis:101

G3JAG0              	100.00%		A3LVX4              	100.00%
                    	       		A3LVX5              	93.95%
                    	       		A3LPE1              	82.37%
                    	       		A3LX83              	25.94%
Bootstrap support for G3JAG0 as seed ortholog is 62%.
Alternative seed ortholog is G3JIH0 (6 bits away from this cluster)
Bootstrap support for A3LVX4 as seed ortholog is 100%.

Group of orthologs #2672. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:101

G3J9T3              	100.00%		A3GHR2              	100.00%
Bootstrap support for G3J9T3 as seed ortholog is 100%.
Bootstrap support for A3GHR2 as seed ortholog is 100%.

Group of orthologs #2673. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:101

G3JGQ3              	100.00%		A3GG67              	100.00%
Bootstrap support for G3JGQ3 as seed ortholog is 100%.
Bootstrap support for A3GG67 as seed ortholog is 100%.

Group of orthologs #2674. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:60

G3J3G1              	100.00%		A3LZB9              	100.00%
Bootstrap support for G3J3G1 as seed ortholog is 100%.
Bootstrap support for A3LZB9 as seed ortholog is 94%.

Group of orthologs #2675. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:101

G3J9W3              	100.00%		A3LVA5              	100.00%
Bootstrap support for G3J9W3 as seed ortholog is 100%.
Bootstrap support for A3LVA5 as seed ortholog is 100%.

Group of orthologs #2676. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:101

G3JHV3              	100.00%		A3LRY6              	100.00%
Bootstrap support for G3JHV3 as seed ortholog is 100%.
Bootstrap support for A3LRY6 as seed ortholog is 100%.

Group of orthologs #2677. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:101

G3JN55              	100.00%		A3GI93              	100.00%
Bootstrap support for G3JN55 as seed ortholog is 100%.
Bootstrap support for A3GI93 as seed ortholog is 100%.

Group of orthologs #2678. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:101

G3JRE7              	100.00%		A3GHI5              	100.00%
Bootstrap support for G3JRE7 as seed ortholog is 96%.
Bootstrap support for A3GHI5 as seed ortholog is 100%.

Group of orthologs #2679. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 S.stipitis:101

G3JMY9              	100.00%		A3LQS6              	100.00%
Bootstrap support for G3JMY9 as seed ortholog is 100%.
Bootstrap support for A3LQS6 as seed ortholog is 100%.

Group of orthologs #2680. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:16 S.stipitis:100

G3JNY9              	100.00%		A3GFQ3              	100.00%
                    	       		A3LN02              	7.43%
                    	       		A3LU75              	6.50%
                    	       		A3LWY7              	5.57%
Bootstrap support for G3JNY9 as seed ortholog is 69%.
Alternative seed ortholog is G3JBN9 (16 bits away from this cluster)
Bootstrap support for A3GFQ3 as seed ortholog is 100%.

Group of orthologs #2681. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:100

G3J608              	100.00%		A3LNM4              	100.00%
Bootstrap support for G3J608 as seed ortholog is 100%.
Bootstrap support for A3LNM4 as seed ortholog is 100%.

Group of orthologs #2682. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:100

G3JL77              	100.00%		A3GHF7              	100.00%
Bootstrap support for G3JL77 as seed ortholog is 100%.
Bootstrap support for A3GHF7 as seed ortholog is 100%.

Group of orthologs #2683. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:100

G3JLM0              	100.00%		A3LMW6              	100.00%
Bootstrap support for G3JLM0 as seed ortholog is 100%.
Bootstrap support for A3LMW6 as seed ortholog is 100%.

Group of orthologs #2684. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:100

G3JFP4              	100.00%		A3LXQ3              	100.00%
Bootstrap support for G3JFP4 as seed ortholog is 100%.
Bootstrap support for A3LXQ3 as seed ortholog is 100%.

Group of orthologs #2685. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:100

G3JUP2              	100.00%		A3LNF4              	100.00%
Bootstrap support for G3JUP2 as seed ortholog is 100%.
Bootstrap support for A3LNF4 as seed ortholog is 100%.

Group of orthologs #2686. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 S.stipitis:100

G3JU80              	100.00%		A3LUH8              	100.00%
Bootstrap support for G3JU80 as seed ortholog is 100%.
Bootstrap support for A3LUH8 as seed ortholog is 100%.

Group of orthologs #2687. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:14 S.stipitis:15

G3J7H8              	100.00%		A3LTS8              	100.00%
G3JK86              	5.66%		
Bootstrap support for G3J7H8 as seed ortholog is 63%.
Alternative seed ortholog is G3JPK8 (14 bits away from this cluster)
Bootstrap support for A3LTS8 as seed ortholog is 67%.
Alternative seed ortholog is A3LXH1 (15 bits away from this cluster)

Group of orthologs #2688. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:99

G3J8F7              	100.00%		A3LS19              	100.00%
Bootstrap support for G3J8F7 as seed ortholog is 100%.
Bootstrap support for A3LS19 as seed ortholog is 100%.

Group of orthologs #2689. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:99

G3J990              	100.00%		A3LYJ5              	100.00%
Bootstrap support for G3J990 as seed ortholog is 94%.
Bootstrap support for A3LYJ5 as seed ortholog is 100%.

Group of orthologs #2690. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:99

G3JD60              	100.00%		A3LVC0              	100.00%
Bootstrap support for G3JD60 as seed ortholog is 100%.
Bootstrap support for A3LVC0 as seed ortholog is 100%.

Group of orthologs #2691. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:3

G3JM13              	100.00%		A3LQU8              	100.00%
Bootstrap support for G3JM13 as seed ortholog is 100%.
Bootstrap support for A3LQU8 as seed ortholog is 54%.
Alternative seed ortholog is A3LPJ3 (3 bits away from this cluster)

Group of orthologs #2692. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 S.stipitis:99

G3JPD4              	100.00%		A3LYZ0              	100.00%
Bootstrap support for G3JPD4 as seed ortholog is 100%.
Bootstrap support for A3LYZ0 as seed ortholog is 100%.

Group of orthologs #2693. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:42

G3JN29              	100.00%		A3LR39              	100.00%
G3JML3              	10.63%		A3LPV4              	30.44%
G3JAY9              	10.03%		A3LPV5              	25.28%
G3J746              	8.28%		A3LSL4              	23.12%
G3J7Q5              	7.85%		A3LPV3              	22.12%
G3JQL2              	6.83%		A3M024              	19.16%
                    	       		A3GH53              	11.13%
                    	       		A3LN31              	11.13%
                    	       		A3LRQ2              	10.83%
                    	       		A3LSN5              	9.28%
                    	       		A3GET8              	7.97%
Bootstrap support for G3JN29 as seed ortholog is 100%.
Bootstrap support for A3LR39 as seed ortholog is 63%.
Alternative seed ortholog is A3LQW4 (42 bits away from this cluster)

Group of orthologs #2694. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:98

G3J3Y5              	100.00%		A3GH72              	100.00%
Bootstrap support for G3J3Y5 as seed ortholog is 100%.
Bootstrap support for A3GH72 as seed ortholog is 100%.

Group of orthologs #2695. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:98

G3J525              	100.00%		A3LRF9              	100.00%
Bootstrap support for G3J525 as seed ortholog is 100%.
Bootstrap support for A3LRF9 as seed ortholog is 100%.

Group of orthologs #2696. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:98

G3JAX0              	100.00%		A3LT61              	100.00%
Bootstrap support for G3JAX0 as seed ortholog is 100%.
Bootstrap support for A3LT61 as seed ortholog is 100%.

Group of orthologs #2697. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:98

G3JHT9              	100.00%		A3LPK7              	100.00%
Bootstrap support for G3JHT9 as seed ortholog is 100%.
Bootstrap support for A3LPK7 as seed ortholog is 100%.

Group of orthologs #2698. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:98

G3J9W4              	100.00%		A3LYA5              	100.00%
Bootstrap support for G3J9W4 as seed ortholog is 99%.
Bootstrap support for A3LYA5 as seed ortholog is 100%.

Group of orthologs #2699. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 S.stipitis:98

G3JBD4              	100.00%		A3LX41              	100.00%
Bootstrap support for G3JBD4 as seed ortholog is 100%.
Bootstrap support for A3LX41 as seed ortholog is 100%.

Group of orthologs #2700. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:41 S.stipitis:43

G3JND7              	100.00%		A3LTG4              	100.00%
Bootstrap support for G3JND7 as seed ortholog is 79%.
Bootstrap support for A3LTG4 as seed ortholog is 77%.

Group of orthologs #2701. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:43

G3J7W0              	100.00%		A3LPP4              	100.00%
G3JIV3              	11.38%		
Bootstrap support for G3J7W0 as seed ortholog is 100%.
Bootstrap support for A3LPP4 as seed ortholog is 67%.
Alternative seed ortholog is A3LR27 (43 bits away from this cluster)

Group of orthologs #2702. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3JAM2              	100.00%		A3LSH3              	100.00%
G3J3I8              	8.01%		
Bootstrap support for G3JAM2 as seed ortholog is 100%.
Bootstrap support for A3LSH3 as seed ortholog is 100%.

Group of orthologs #2703. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3J910              	100.00%		A3GH76              	100.00%
Bootstrap support for G3J910 as seed ortholog is 100%.
Bootstrap support for A3GH76 as seed ortholog is 100%.

Group of orthologs #2704. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3J2Z3              	100.00%		A3LT21              	100.00%
Bootstrap support for G3J2Z3 as seed ortholog is 100%.
Bootstrap support for A3LT21 as seed ortholog is 100%.

Group of orthologs #2705. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3J4Q3              	100.00%		A3LSG4              	100.00%
Bootstrap support for G3J4Q3 as seed ortholog is 100%.
Bootstrap support for A3LSG4 as seed ortholog is 100%.

Group of orthologs #2706. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3J9Z7              	100.00%		A3LQK8              	100.00%
Bootstrap support for G3J9Z7 as seed ortholog is 100%.
Bootstrap support for A3LQK8 as seed ortholog is 100%.

Group of orthologs #2707. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3JIZ7              	100.00%		A3GGE2              	100.00%
Bootstrap support for G3JIZ7 as seed ortholog is 100%.
Bootstrap support for A3GGE2 as seed ortholog is 100%.

Group of orthologs #2708. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3JDB6              	100.00%		A3LT80              	100.00%
Bootstrap support for G3JDB6 as seed ortholog is 100%.
Bootstrap support for A3LT80 as seed ortholog is 100%.

Group of orthologs #2709. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3JA25              	100.00%		A3M0L8              	100.00%
Bootstrap support for G3JA25 as seed ortholog is 100%.
Bootstrap support for A3M0L8 as seed ortholog is 100%.

Group of orthologs #2710. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3JU97              	100.00%		A3GHA9              	100.00%
Bootstrap support for G3JU97 as seed ortholog is 100%.
Bootstrap support for A3GHA9 as seed ortholog is 100%.

Group of orthologs #2711. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 S.stipitis:97

G3JV33              	100.00%		A3LUD0              	100.00%
Bootstrap support for G3JV33 as seed ortholog is 100%.
Bootstrap support for A3LUD0 as seed ortholog is 100%.

Group of orthologs #2712. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3J856              	100.00%		A3GHI0              	100.00%
Bootstrap support for G3J856 as seed ortholog is 100%.
Bootstrap support for A3GHI0 as seed ortholog is 100%.

Group of orthologs #2713. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3J7B4              	100.00%		A3LMZ5              	100.00%
Bootstrap support for G3J7B4 as seed ortholog is 100%.
Bootstrap support for A3LMZ5 as seed ortholog is 100%.

Group of orthologs #2714. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3J3V7              	100.00%		A3LVW6              	100.00%
Bootstrap support for G3J3V7 as seed ortholog is 100%.
Bootstrap support for A3LVW6 as seed ortholog is 100%.

Group of orthologs #2715. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:51 S.stipitis:96

G3J5U0              	100.00%		A3LYB7              	100.00%
Bootstrap support for G3J5U0 as seed ortholog is 99%.
Bootstrap support for A3LYB7 as seed ortholog is 100%.

Group of orthologs #2716. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JAN9              	100.00%		A3LV33              	100.00%
Bootstrap support for G3JAN9 as seed ortholog is 100%.
Bootstrap support for A3LV33 as seed ortholog is 100%.

Group of orthologs #2717. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3J7N9              	100.00%		A3LY96              	100.00%
Bootstrap support for G3J7N9 as seed ortholog is 100%.
Bootstrap support for A3LY96 as seed ortholog is 100%.

Group of orthologs #2718. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3J9H3              	100.00%		A3LYH3              	100.00%
Bootstrap support for G3J9H3 as seed ortholog is 100%.
Bootstrap support for A3LYH3 as seed ortholog is 100%.

Group of orthologs #2719. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JCE3              	100.00%		A3LVK7              	100.00%
Bootstrap support for G3JCE3 as seed ortholog is 100%.
Bootstrap support for A3LVK7 as seed ortholog is 100%.

Group of orthologs #2720. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JL91              	100.00%		A3GHW4              	100.00%
Bootstrap support for G3JL91 as seed ortholog is 100%.
Bootstrap support for A3GHW4 as seed ortholog is 100%.

Group of orthologs #2721. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JGC7              	100.00%		A3LSC2              	100.00%
Bootstrap support for G3JGC7 as seed ortholog is 100%.
Bootstrap support for A3LSC2 as seed ortholog is 100%.

Group of orthologs #2722. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JPI5              	100.00%		A3LQ63              	100.00%
Bootstrap support for G3JPI5 as seed ortholog is 100%.
Bootstrap support for A3LQ63 as seed ortholog is 100%.

Group of orthologs #2723. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JL37              	100.00%		A3LVB7              	100.00%
Bootstrap support for G3JL37 as seed ortholog is 100%.
Bootstrap support for A3LVB7 as seed ortholog is 100%.

Group of orthologs #2724. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JTT4              	100.00%		A3LNA2              	100.00%
Bootstrap support for G3JTT4 as seed ortholog is 100%.
Bootstrap support for A3LNA2 as seed ortholog is 100%.

Group of orthologs #2725. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 S.stipitis:96

G3JPI3              	100.00%		A3M002              	100.00%
Bootstrap support for G3JPI3 as seed ortholog is 100%.
Bootstrap support for A3M002 as seed ortholog is 100%.

Group of orthologs #2726. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JAC1              	100.00%		A3LVJ5              	100.00%
                    	       		A3LTT6              	30.07%
Bootstrap support for G3JAC1 as seed ortholog is 100%.
Bootstrap support for A3LVJ5 as seed ortholog is 100%.

Group of orthologs #2727. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JU12              	100.00%		A3LT72              	100.00%
G3JTL7              	5.57%		
Bootstrap support for G3JU12 as seed ortholog is 100%.
Bootstrap support for A3LT72 as seed ortholog is 100%.

Group of orthologs #2728. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3J2Q1              	100.00%		A3LTI3              	100.00%
Bootstrap support for G3J2Q1 as seed ortholog is 100%.
Bootstrap support for A3LTI3 as seed ortholog is 100%.

Group of orthologs #2729. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JBH4              	100.00%		A3GG21              	100.00%
Bootstrap support for G3JBH4 as seed ortholog is 100%.
Bootstrap support for A3GG21 as seed ortholog is 100%.

Group of orthologs #2730. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3J997              	100.00%		A3LS23              	100.00%
Bootstrap support for G3J997 as seed ortholog is 100%.
Bootstrap support for A3LS23 as seed ortholog is 100%.

Group of orthologs #2731. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JBS5              	100.00%		A3LUQ5              	100.00%
Bootstrap support for G3JBS5 as seed ortholog is 100%.
Bootstrap support for A3LUQ5 as seed ortholog is 100%.

Group of orthologs #2732. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JDE8              	100.00%		A3LV08              	100.00%
Bootstrap support for G3JDE8 as seed ortholog is 100%.
Bootstrap support for A3LV08 as seed ortholog is 100%.

Group of orthologs #2733. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JFX7              	100.00%		A3LXV2              	100.00%
Bootstrap support for G3JFX7 as seed ortholog is 100%.
Bootstrap support for A3LXV2 as seed ortholog is 100%.

Group of orthologs #2734. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JML9              	100.00%		A3LS54              	100.00%
Bootstrap support for G3JML9 as seed ortholog is 100%.
Bootstrap support for A3LS54 as seed ortholog is 100%.

Group of orthologs #2735. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 S.stipitis:95

G3JNB8              	100.00%		A3LVI2              	100.00%
Bootstrap support for G3JNB8 as seed ortholog is 100%.
Bootstrap support for A3LVI2 as seed ortholog is 100%.

Group of orthologs #2736. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3J459              	100.00%		A3GH20              	100.00%
Bootstrap support for G3J459 as seed ortholog is 100%.
Bootstrap support for A3GH20 as seed ortholog is 100%.

Group of orthologs #2737. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:15 S.stipitis:12

G3J6P7              	100.00%		A3GI91              	100.00%
Bootstrap support for G3J6P7 as seed ortholog is 78%.
Bootstrap support for A3GI91 as seed ortholog is 70%.
Alternative seed ortholog is A3GG43 (12 bits away from this cluster)

Group of orthologs #2738. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JBD5              	100.00%		A3GHM1              	100.00%
Bootstrap support for G3JBD5 as seed ortholog is 100%.
Bootstrap support for A3GHM1 as seed ortholog is 100%.

Group of orthologs #2739. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:16

G3J8Q0              	100.00%		A3LRC6              	100.00%
Bootstrap support for G3J8Q0 as seed ortholog is 100%.
Bootstrap support for A3LRC6 as seed ortholog is 25%.
Alternative seed ortholog is A3LYA2 (16 bits away from this cluster)

Group of orthologs #2740. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:44

G3J307              	100.00%		A3LX61              	100.00%
Bootstrap support for G3J307 as seed ortholog is 100%.
Bootstrap support for A3LX61 as seed ortholog is 94%.

Group of orthologs #2741. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:20 S.stipitis:20

G3J2N1              	100.00%		A3LXS2              	100.00%
Bootstrap support for G3J2N1 as seed ortholog is 73%.
Alternative seed ortholog is G3JMW1 (20 bits away from this cluster)
Bootstrap support for A3LXS2 as seed ortholog is 73%.
Alternative seed ortholog is A3LSN6 (20 bits away from this cluster)

Group of orthologs #2742. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3J2U9              	100.00%		A3LZB7              	100.00%
Bootstrap support for G3J2U9 as seed ortholog is 100%.
Bootstrap support for A3LZB7 as seed ortholog is 100%.

Group of orthologs #2743. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JH97              	100.00%		A3GFN8              	100.00%
Bootstrap support for G3JH97 as seed ortholog is 100%.
Bootstrap support for A3GFN8 as seed ortholog is 100%.

Group of orthologs #2744. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JGX1              	100.00%		A3GI22              	100.00%
Bootstrap support for G3JGX1 as seed ortholog is 100%.
Bootstrap support for A3GI22 as seed ortholog is 100%.

Group of orthologs #2745. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:17

G3JNG4              	100.00%		A3GFR3              	100.00%
Bootstrap support for G3JNG4 as seed ortholog is 100%.
Bootstrap support for A3GFR3 as seed ortholog is 79%.

Group of orthologs #2746. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JQ16              	100.00%		A3LRM8              	100.00%
Bootstrap support for G3JQ16 as seed ortholog is 100%.
Bootstrap support for A3LRM8 as seed ortholog is 100%.

Group of orthologs #2747. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JNV8              	100.00%		A3LTJ6              	100.00%
Bootstrap support for G3JNV8 as seed ortholog is 100%.
Bootstrap support for A3LTJ6 as seed ortholog is 100%.

Group of orthologs #2748. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JLN2              	100.00%		A3LXX6              	100.00%
Bootstrap support for G3JLN2 as seed ortholog is 100%.
Bootstrap support for A3LXX6 as seed ortholog is 100%.

Group of orthologs #2749. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JQN9              	100.00%		A3LVA6              	100.00%
Bootstrap support for G3JQN9 as seed ortholog is 100%.
Bootstrap support for A3LVA6 as seed ortholog is 100%.

Group of orthologs #2750. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 S.stipitis:94

G3JRL1              	100.00%		A3LVN0              	100.00%
Bootstrap support for G3JRL1 as seed ortholog is 100%.
Bootstrap support for A3LVN0 as seed ortholog is 100%.

Group of orthologs #2751. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:93

G3JQ75              	100.00%		A3LPE9              	100.00%
                    	       		A3GHV4              	5.71%
Bootstrap support for G3JQ75 as seed ortholog is 100%.
Bootstrap support for A3LPE9 as seed ortholog is 100%.

Group of orthologs #2752. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:93

G3JF07              	100.00%		A3GFZ9              	100.00%
Bootstrap support for G3JF07 as seed ortholog is 100%.
Bootstrap support for A3GFZ9 as seed ortholog is 100%.

Group of orthologs #2753. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:93

G3J7G5              	100.00%		A3LTZ8              	100.00%
Bootstrap support for G3J7G5 as seed ortholog is 100%.
Bootstrap support for A3LTZ8 as seed ortholog is 100%.

Group of orthologs #2754. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:93

G3JLQ5              	100.00%		A3LNX6              	100.00%
Bootstrap support for G3JLQ5 as seed ortholog is 100%.
Bootstrap support for A3LNX6 as seed ortholog is 100%.

Group of orthologs #2755. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:93

G3JJV6              	100.00%		A3LWL1              	100.00%
Bootstrap support for G3JJV6 as seed ortholog is 100%.
Bootstrap support for A3LWL1 as seed ortholog is 100%.

Group of orthologs #2756. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 S.stipitis:93

G3JQ20              	100.00%		A3LVU9              	100.00%
Bootstrap support for G3JQ20 as seed ortholog is 100%.
Bootstrap support for A3LVU9 as seed ortholog is 100%.

Group of orthologs #2757. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3J5Q8              	100.00%		A3GHN9              	100.00%
Bootstrap support for G3J5Q8 as seed ortholog is 100%.
Bootstrap support for A3GHN9 as seed ortholog is 100%.

Group of orthologs #2758. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3J6I8              	100.00%		A3GHP7              	100.00%
Bootstrap support for G3J6I8 as seed ortholog is 100%.
Bootstrap support for A3GHP7 as seed ortholog is 100%.

Group of orthologs #2759. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3J3V1              	100.00%		A3LW75              	100.00%
Bootstrap support for G3J3V1 as seed ortholog is 100%.
Bootstrap support for A3LW75 as seed ortholog is 100%.

Group of orthologs #2760. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3JB37              	100.00%		A3LQI9              	100.00%
Bootstrap support for G3JB37 as seed ortholog is 100%.
Bootstrap support for A3LQI9 as seed ortholog is 100%.

Group of orthologs #2761. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3J9Q7              	100.00%		A3LTF9              	100.00%
Bootstrap support for G3J9Q7 as seed ortholog is 100%.
Bootstrap support for A3LTF9 as seed ortholog is 100%.

Group of orthologs #2762. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3J7R8              	100.00%		A3LXG5              	100.00%
Bootstrap support for G3J7R8 as seed ortholog is 100%.
Bootstrap support for A3LXG5 as seed ortholog is 100%.

Group of orthologs #2763. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3JLB0              	100.00%		A3GEW6              	100.00%
Bootstrap support for G3JLB0 as seed ortholog is 100%.
Bootstrap support for A3GEW6 as seed ortholog is 100%.

Group of orthologs #2764. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3JLQ8              	100.00%		A3GH86              	100.00%
Bootstrap support for G3JLQ8 as seed ortholog is 100%.
Bootstrap support for A3GH86 as seed ortholog is 100%.

Group of orthologs #2765. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3J9J3              	100.00%		A3M0H6              	100.00%
Bootstrap support for G3J9J3 as seed ortholog is 100%.
Bootstrap support for A3M0H6 as seed ortholog is 100%.

Group of orthologs #2766. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3JL88              	100.00%		A3LU87              	100.00%
Bootstrap support for G3JL88 as seed ortholog is 100%.
Bootstrap support for A3LU87 as seed ortholog is 100%.

Group of orthologs #2767. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3JU28              	100.00%		A3LN27              	100.00%
Bootstrap support for G3JU28 as seed ortholog is 100%.
Bootstrap support for A3LN27 as seed ortholog is 100%.

Group of orthologs #2768. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 S.stipitis:92

G3JQ03              	100.00%		A3LV15              	100.00%
Bootstrap support for G3JQ03 as seed ortholog is 100%.
Bootstrap support for A3LV15 as seed ortholog is 100%.

Group of orthologs #2769. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JTU7              	100.00%		A3GGJ9              	100.00%
G3JDS4              	30.92%		
Bootstrap support for G3JTU7 as seed ortholog is 100%.
Bootstrap support for A3GGJ9 as seed ortholog is 100%.

Group of orthologs #2770. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JPB0              	100.00%		A3LWU6              	100.00%
                    	       		A3LWU7              	77.40%
Bootstrap support for G3JPB0 as seed ortholog is 100%.
Bootstrap support for A3LWU6 as seed ortholog is 100%.

Group of orthologs #2771. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3J3W1              	100.00%		A3LQW5              	100.00%
Bootstrap support for G3J3W1 as seed ortholog is 100%.
Bootstrap support for A3LQW5 as seed ortholog is 100%.

Group of orthologs #2772. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JAE3              	100.00%		A3LP80              	100.00%
Bootstrap support for G3JAE3 as seed ortholog is 100%.
Bootstrap support for A3LP80 as seed ortholog is 100%.

Group of orthologs #2773. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JEC7              	100.00%		A3GHB7              	100.00%
Bootstrap support for G3JEC7 as seed ortholog is 100%.
Bootstrap support for A3GHB7 as seed ortholog is 100%.

Group of orthologs #2774. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3J9Y8              	100.00%		A3LS72              	100.00%
Bootstrap support for G3J9Y8 as seed ortholog is 100%.
Bootstrap support for A3LS72 as seed ortholog is 100%.

Group of orthologs #2775. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JDR1              	100.00%		A3LVC8              	100.00%
Bootstrap support for G3JDR1 as seed ortholog is 100%.
Bootstrap support for A3LVC8 as seed ortholog is 100%.

Group of orthologs #2776. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JPL2              	100.00%		A3GHD4              	100.00%
Bootstrap support for G3JPL2 as seed ortholog is 100%.
Bootstrap support for A3GHD4 as seed ortholog is 100%.

Group of orthologs #2777. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JIB0              	100.00%		A3LUM0              	100.00%
Bootstrap support for G3JIB0 as seed ortholog is 100%.
Bootstrap support for A3LUM0 as seed ortholog is 100%.

Group of orthologs #2778. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JNL6              	100.00%		A3LTY3              	100.00%
Bootstrap support for G3JNL6 as seed ortholog is 100%.
Bootstrap support for A3LTY3 as seed ortholog is 100%.

Group of orthologs #2779. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:7 S.stipitis:91

G3JJ47              	100.00%		A3LYT7              	100.00%
Bootstrap support for G3JJ47 as seed ortholog is 45%.
Alternative seed ortholog is G3JNY1 (7 bits away from this cluster)
Bootstrap support for A3LYT7 as seed ortholog is 100%.

Group of orthologs #2780. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JIJ7              	100.00%		A3M0D1              	100.00%
Bootstrap support for G3JIJ7 as seed ortholog is 100%.
Bootstrap support for A3M0D1 as seed ortholog is 100%.

Group of orthologs #2781. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JRF6              	100.00%		A3LVL8              	100.00%
Bootstrap support for G3JRF6 as seed ortholog is 100%.
Bootstrap support for A3LVL8 as seed ortholog is 100%.

Group of orthologs #2782. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 S.stipitis:91

G3JUD9              	100.00%		A3LX32              	100.00%
Bootstrap support for G3JUD9 as seed ortholog is 100%.
Bootstrap support for A3LX32 as seed ortholog is 100%.

Group of orthologs #2783. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JC63              	100.00%		A3GHR7              	100.00%
Bootstrap support for G3JC63 as seed ortholog is 100%.
Bootstrap support for A3GHR7 as seed ortholog is 100%.

Group of orthologs #2784. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3J3F5              	100.00%		A3LX40              	100.00%
Bootstrap support for G3J3F5 as seed ortholog is 100%.
Bootstrap support for A3LX40 as seed ortholog is 100%.

Group of orthologs #2785. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3J9L8              	100.00%		A3LRW5              	100.00%
Bootstrap support for G3J9L8 as seed ortholog is 100%.
Bootstrap support for A3LRW5 as seed ortholog is 100%.

Group of orthologs #2786. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JJ31              	100.00%		A3GI07              	100.00%
Bootstrap support for G3JJ31 as seed ortholog is 100%.
Bootstrap support for A3GI07 as seed ortholog is 100%.

Group of orthologs #2787. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3J6U0              	100.00%		A3M035              	100.00%
Bootstrap support for G3J6U0 as seed ortholog is 100%.
Bootstrap support for A3M035 as seed ortholog is 100%.

Group of orthologs #2788. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JRD9              	100.00%		A3GF37              	100.00%
Bootstrap support for G3JRD9 as seed ortholog is 100%.
Bootstrap support for A3GF37 as seed ortholog is 100%.

Group of orthologs #2789. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JHP1              	100.00%		A3LTL0              	100.00%
Bootstrap support for G3JHP1 as seed ortholog is 100%.
Bootstrap support for A3LTL0 as seed ortholog is 100%.

Group of orthologs #2790. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JF80              	100.00%		A3LWG1              	100.00%
Bootstrap support for G3JF80 as seed ortholog is 100%.
Bootstrap support for A3LWG1 as seed ortholog is 100%.

Group of orthologs #2791. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:45 S.stipitis:90

G3JU92              	100.00%		A3LRE6              	100.00%
Bootstrap support for G3JU92 as seed ortholog is 95%.
Bootstrap support for A3LRE6 as seed ortholog is 100%.

Group of orthologs #2792. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JV03              	100.00%		A3LU32              	100.00%
Bootstrap support for G3JV03 as seed ortholog is 100%.
Bootstrap support for A3LU32 as seed ortholog is 100%.

Group of orthologs #2793. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 S.stipitis:90

G3JTI4              	100.00%		A3LX58              	100.00%
Bootstrap support for G3JTI4 as seed ortholog is 100%.
Bootstrap support for A3LX58 as seed ortholog is 100%.

Group of orthologs #2794. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JSW8              	100.00%		A3LY77              	100.00%
G3JS37              	9.39%		
G3JMX8              	6.18%		
Bootstrap support for G3JSW8 as seed ortholog is 100%.
Bootstrap support for A3LY77 as seed ortholog is 100%.

Group of orthologs #2795. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3J5J5              	100.00%		A3GIC5              	100.00%
                    	       		A3GIC1              	30.05%
Bootstrap support for G3J5J5 as seed ortholog is 100%.
Bootstrap support for A3GIC5 as seed ortholog is 100%.

Group of orthologs #2796. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3J524              	100.00%		A3GFA0              	100.00%
Bootstrap support for G3J524 as seed ortholog is 100%.
Bootstrap support for A3GFA0 as seed ortholog is 100%.

Group of orthologs #2797. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3J731              	100.00%		A3LMX9              	100.00%
Bootstrap support for G3J731 as seed ortholog is 100%.
Bootstrap support for A3LMX9 as seed ortholog is 100%.

Group of orthologs #2798. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:22

G3J2P2              	100.00%		A3LVS6              	100.00%
Bootstrap support for G3J2P2 as seed ortholog is 100%.
Bootstrap support for A3LVS6 as seed ortholog is 28%.
Alternative seed ortholog is A3LPN7 (22 bits away from this cluster)

Group of orthologs #2799. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JGJ0              	100.00%		A3GFM6              	100.00%
Bootstrap support for G3JGJ0 as seed ortholog is 100%.
Bootstrap support for A3GFM6 as seed ortholog is 100%.

Group of orthologs #2800. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3J4D5              	100.00%		A3LYV1              	100.00%
Bootstrap support for G3J4D5 as seed ortholog is 100%.
Bootstrap support for A3LYV1 as seed ortholog is 100%.

Group of orthologs #2801. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JAB9              	100.00%		A3LSY3              	100.00%
Bootstrap support for G3JAB9 as seed ortholog is 100%.
Bootstrap support for A3LSY3 as seed ortholog is 100%.

Group of orthologs #2802. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JAW7              	100.00%		A3LTY2              	100.00%
Bootstrap support for G3JAW7 as seed ortholog is 100%.
Bootstrap support for A3LTY2 as seed ortholog is 100%.

Group of orthologs #2803. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:37 S.stipitis:89

G3JC19              	100.00%		A3LVF3              	100.00%
Bootstrap support for G3JC19 as seed ortholog is 96%.
Bootstrap support for A3LVF3 as seed ortholog is 100%.

Group of orthologs #2804. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JL81              	100.00%		A3GHC6              	100.00%
Bootstrap support for G3JL81 as seed ortholog is 100%.
Bootstrap support for A3GHC6 as seed ortholog is 100%.

Group of orthologs #2805. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JF47              	100.00%		A3LT46              	100.00%
Bootstrap support for G3JF47 as seed ortholog is 100%.
Bootstrap support for A3LT46 as seed ortholog is 100%.

Group of orthologs #2806. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JA23              	100.00%		A3LYM6              	100.00%
Bootstrap support for G3JA23 as seed ortholog is 100%.
Bootstrap support for A3LYM6 as seed ortholog is 100%.

Group of orthologs #2807. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JLX6              	100.00%		A3GHL2              	100.00%
Bootstrap support for G3JLX6 as seed ortholog is 100%.
Bootstrap support for A3GHL2 as seed ortholog is 100%.

Group of orthologs #2808. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JRA9              	100.00%		A3GGU5              	100.00%
Bootstrap support for G3JRA9 as seed ortholog is 100%.
Bootstrap support for A3GGU5 as seed ortholog is 100%.

Group of orthologs #2809. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:14 S.stipitis:89

G3JDF1              	100.00%		A3LZP3              	100.00%
Bootstrap support for G3JDF1 as seed ortholog is 60%.
Alternative seed ortholog is G3JAV6 (14 bits away from this cluster)
Bootstrap support for A3LZP3 as seed ortholog is 100%.

Group of orthologs #2810. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JHH7              	100.00%		A3LWP9              	100.00%
Bootstrap support for G3JHH7 as seed ortholog is 100%.
Bootstrap support for A3LWP9 as seed ortholog is 100%.

Group of orthologs #2811. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JMG8              	100.00%		A3LSW1              	100.00%
Bootstrap support for G3JMG8 as seed ortholog is 100%.
Bootstrap support for A3LSW1 as seed ortholog is 100%.

Group of orthologs #2812. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JNN8              	100.00%		A3LTU7              	100.00%
Bootstrap support for G3JNN8 as seed ortholog is 100%.
Bootstrap support for A3LTU7 as seed ortholog is 100%.

Group of orthologs #2813. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JV10              	100.00%		A3LMU9              	100.00%
Bootstrap support for G3JV10 as seed ortholog is 100%.
Bootstrap support for A3LMU9 as seed ortholog is 100%.

Group of orthologs #2814. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 S.stipitis:89

G3JTU8              	100.00%		A3LRN2              	100.00%
Bootstrap support for G3JTU8 as seed ortholog is 100%.
Bootstrap support for A3LRN2 as seed ortholog is 100%.

Group of orthologs #2815. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3J3L3              	100.00%		A3GGU4              	100.00%
Bootstrap support for G3J3L3 as seed ortholog is 100%.
Bootstrap support for A3GGU4 as seed ortholog is 100%.

Group of orthologs #2816. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3JB16              	100.00%		A3LU27              	100.00%
Bootstrap support for G3JB16 as seed ortholog is 100%.
Bootstrap support for A3LU27 as seed ortholog is 100%.

Group of orthologs #2817. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3JD64              	100.00%		A3LSH2              	100.00%
Bootstrap support for G3JD64 as seed ortholog is 100%.
Bootstrap support for A3LSH2 as seed ortholog is 100%.

Group of orthologs #2818. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3J953              	100.00%		A3LX93              	100.00%
Bootstrap support for G3J953 as seed ortholog is 100%.
Bootstrap support for A3LX93 as seed ortholog is 100%.

Group of orthologs #2819. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3JN42              	100.00%		A3GG42              	100.00%
Bootstrap support for G3JN42 as seed ortholog is 100%.
Bootstrap support for A3GG42 as seed ortholog is 100%.

Group of orthologs #2820. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3J8I5              	100.00%		A3M0I5              	100.00%
Bootstrap support for G3J8I5 as seed ortholog is 100%.
Bootstrap support for A3M0I5 as seed ortholog is 100%.

Group of orthologs #2821. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 S.stipitis:88

G3JMH7              	100.00%		A3LMU0              	100.00%
Bootstrap support for G3JMH7 as seed ortholog is 100%.
Bootstrap support for A3LMU0 as seed ortholog is 100%.

Group of orthologs #2822. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3JSG4              	100.00%		A3LW45              	100.00%
G3JTB3              	16.48%		
Bootstrap support for G3JSG4 as seed ortholog is 100%.
Bootstrap support for A3LW45 as seed ortholog is 100%.

Group of orthologs #2823. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3J6J3              	100.00%		A3LRK2              	100.00%
Bootstrap support for G3J6J3 as seed ortholog is 100%.
Bootstrap support for A3LRK2 as seed ortholog is 100%.

Group of orthologs #2824. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3J8M2              	100.00%		A3LU29              	100.00%
Bootstrap support for G3J8M2 as seed ortholog is 100%.
Bootstrap support for A3LU29 as seed ortholog is 100%.

Group of orthologs #2825. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3JFA1              	100.00%		A3LZ07              	100.00%
Bootstrap support for G3JFA1 as seed ortholog is 100%.
Bootstrap support for A3LZ07 as seed ortholog is 100%.

Group of orthologs #2826. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3JJ75              	100.00%		A3LVY0              	100.00%
Bootstrap support for G3JJ75 as seed ortholog is 100%.
Bootstrap support for A3LVY0 as seed ortholog is 100%.

Group of orthologs #2827. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3JQD9              	100.00%		A3LU00              	100.00%
Bootstrap support for G3JQD9 as seed ortholog is 100%.
Bootstrap support for A3LU00 as seed ortholog is 100%.

Group of orthologs #2828. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3JL33              	100.00%		A3M036              	100.00%
Bootstrap support for G3JL33 as seed ortholog is 100%.
Bootstrap support for A3M036 as seed ortholog is 100%.

Group of orthologs #2829. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 S.stipitis:87

G3JQ77              	100.00%		A3LZY9              	100.00%
Bootstrap support for G3JQ77 as seed ortholog is 100%.
Bootstrap support for A3LZY9 as seed ortholog is 100%.

Group of orthologs #2830. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3J6A3              	100.00%		A3GFP2              	100.00%
Bootstrap support for G3J6A3 as seed ortholog is 100%.
Bootstrap support for A3GFP2 as seed ortholog is 100%.

Group of orthologs #2831. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3J4E6              	100.00%		A3GHP0              	100.00%
Bootstrap support for G3J4E6 as seed ortholog is 100%.
Bootstrap support for A3GHP0 as seed ortholog is 100%.

Group of orthologs #2832. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3JA81              	100.00%		A3GGL2              	100.00%
Bootstrap support for G3JA81 as seed ortholog is 100%.
Bootstrap support for A3GGL2 as seed ortholog is 100%.

Group of orthologs #2833. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3J3W3              	100.00%		A3LT26              	100.00%
Bootstrap support for G3J3W3 as seed ortholog is 100%.
Bootstrap support for A3LT26 as seed ortholog is 100%.

Group of orthologs #2834. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3JH90              	100.00%		A3LTL2              	100.00%
Bootstrap support for G3JH90 as seed ortholog is 100%.
Bootstrap support for A3LTL2 as seed ortholog is 100%.

Group of orthologs #2835. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3JHX8              	100.00%		A3LTZ9              	100.00%
Bootstrap support for G3JHX8 as seed ortholog is 100%.
Bootstrap support for A3LTZ9 as seed ortholog is 100%.

Group of orthologs #2836. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3JNN0              	100.00%		A3LND5              	100.00%
Bootstrap support for G3JNN0 as seed ortholog is 100%.
Bootstrap support for A3LND5 as seed ortholog is 100%.

Group of orthologs #2837. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3JNI8              	100.00%		A3LXY2              	100.00%
Bootstrap support for G3JNI8 as seed ortholog is 100%.
Bootstrap support for A3LXY2 as seed ortholog is 100%.

Group of orthologs #2838. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:2

G3JSD7              	100.00%		A3LW47              	100.00%
Bootstrap support for G3JSD7 as seed ortholog is 100%.
Bootstrap support for A3LW47 as seed ortholog is 47%.
Alternative seed ortholog is A3LUV5 (2 bits away from this cluster)

Group of orthologs #2839. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 S.stipitis:86

G3JSK8              	100.00%		A3LY14              	100.00%
Bootstrap support for G3JSK8 as seed ortholog is 100%.
Bootstrap support for A3LY14 as seed ortholog is 100%.

Group of orthologs #2840. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:12 S.stipitis:85

G3JAY8              	100.00%		A3LVQ9              	100.00%
G3JA34              	51.91%		
Bootstrap support for G3JAY8 as seed ortholog is 61%.
Alternative seed ortholog is G3JH36 (12 bits away from this cluster)
Bootstrap support for A3LVQ9 as seed ortholog is 100%.

Group of orthologs #2841. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3J7W6              	100.00%		A3LQS3              	100.00%
Bootstrap support for G3J7W6 as seed ortholog is 100%.
Bootstrap support for A3LQS3 as seed ortholog is 100%.

Group of orthologs #2842. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3J9Z1              	100.00%		A3LPB2              	100.00%
Bootstrap support for G3J9Z1 as seed ortholog is 100%.
Bootstrap support for A3LPB2 as seed ortholog is 100%.

Group of orthologs #2843. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3JDC5              	100.00%		A3GIE2              	100.00%
Bootstrap support for G3JDC5 as seed ortholog is 100%.
Bootstrap support for A3GIE2 as seed ortholog is 100%.

Group of orthologs #2844. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3JE17              	100.00%		A3LP01              	100.00%
Bootstrap support for G3JE17 as seed ortholog is 100%.
Bootstrap support for A3LP01 as seed ortholog is 100%.

Group of orthologs #2845. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3J7V9              	100.00%		A3LVV9              	100.00%
Bootstrap support for G3J7V9 as seed ortholog is 100%.
Bootstrap support for A3LVV9 as seed ortholog is 100%.

Group of orthologs #2846. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3JE59              	100.00%		A3LQH2              	100.00%
Bootstrap support for G3JE59 as seed ortholog is 100%.
Bootstrap support for A3LQH2 as seed ortholog is 100%.

Group of orthologs #2847. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3JQB3              	100.00%		A3LN96              	100.00%
Bootstrap support for G3JQB3 as seed ortholog is 100%.
Bootstrap support for A3LN96 as seed ortholog is 100%.

Group of orthologs #2848. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 S.stipitis:85

G3JJY7              	100.00%		A3LV93              	100.00%
Bootstrap support for G3JJY7 as seed ortholog is 100%.
Bootstrap support for A3LV93 as seed ortholog is 100%.

Group of orthologs #2849. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3J7D5              	100.00%		A3GFE1              	100.00%
Bootstrap support for G3J7D5 as seed ortholog is 100%.
Bootstrap support for A3GFE1 as seed ortholog is 100%.

Group of orthologs #2850. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3J9Y6              	100.00%		A3LN82              	100.00%
Bootstrap support for G3J9Y6 as seed ortholog is 100%.
Bootstrap support for A3LN82 as seed ortholog is 100%.

Group of orthologs #2851. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3J780              	100.00%		A3LSC0              	100.00%
Bootstrap support for G3J780 as seed ortholog is 100%.
Bootstrap support for A3LSC0 as seed ortholog is 100%.

Group of orthologs #2852. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3J8F4              	100.00%		A3LSS0              	100.00%
Bootstrap support for G3J8F4 as seed ortholog is 100%.
Bootstrap support for A3LSS0 as seed ortholog is 100%.

Group of orthologs #2853. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JFC8              	100.00%		A3LNY0              	100.00%
Bootstrap support for G3JFC8 as seed ortholog is 100%.
Bootstrap support for A3LNY0 as seed ortholog is 100%.

Group of orthologs #2854. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JDC7              	100.00%		A3LRT0              	100.00%
Bootstrap support for G3JDC7 as seed ortholog is 100%.
Bootstrap support for A3LRT0 as seed ortholog is 100%.

Group of orthologs #2855. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JJ13              	100.00%		A3GGT6              	100.00%
Bootstrap support for G3JJ13 as seed ortholog is 100%.
Bootstrap support for A3GGT6 as seed ortholog is 100%.

Group of orthologs #2856. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3J7A6              	100.00%		A3LYY6              	100.00%
Bootstrap support for G3J7A6 as seed ortholog is 100%.
Bootstrap support for A3LYY6 as seed ortholog is 100%.

Group of orthologs #2857. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JLN4              	100.00%		A3LQ59              	100.00%
Bootstrap support for G3JLN4 as seed ortholog is 100%.
Bootstrap support for A3LQ59 as seed ortholog is 100%.

Group of orthologs #2858. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JRZ2              	100.00%		A3GFS3              	100.00%
Bootstrap support for G3JRZ2 as seed ortholog is 100%.
Bootstrap support for A3GFS3 as seed ortholog is 100%.

Group of orthologs #2859. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:2 S.stipitis:84

G3JMB2              	100.00%		A3LQL6              	100.00%
Bootstrap support for G3JMB2 as seed ortholog is 55%.
Alternative seed ortholog is G3J5Z6 (2 bits away from this cluster)
Bootstrap support for A3LQL6 as seed ortholog is 100%.

Group of orthologs #2860. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JL14              	100.00%		A3LSH6              	100.00%
Bootstrap support for G3JL14 as seed ortholog is 100%.
Bootstrap support for A3LSH6 as seed ortholog is 100%.

Group of orthologs #2861. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JLQ4              	100.00%		A3LV25              	100.00%
Bootstrap support for G3JLQ4 as seed ortholog is 100%.
Bootstrap support for A3LV25 as seed ortholog is 100%.

Group of orthologs #2862. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JH72              	100.00%		A3M0K3              	100.00%
Bootstrap support for G3JH72 as seed ortholog is 100%.
Bootstrap support for A3M0K3 as seed ortholog is 100%.

Group of orthologs #2863. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JS72              	100.00%		A3LSR1              	100.00%
Bootstrap support for G3JS72 as seed ortholog is 100%.
Bootstrap support for A3LSR1 as seed ortholog is 100%.

Group of orthologs #2864. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 S.stipitis:84

G3JTH0              	100.00%		A3LW92              	100.00%
Bootstrap support for G3JTH0 as seed ortholog is 100%.
Bootstrap support for A3LW92 as seed ortholog is 100%.

Group of orthologs #2865. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:83

G3JIT3              	100.00%		A3GFL1              	100.00%
G3JTP6              	10.61%		
Bootstrap support for G3JIT3 as seed ortholog is 100%.
Bootstrap support for A3GFL1 as seed ortholog is 100%.

Group of orthologs #2866. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:17

G3J756              	100.00%		A3GGM9              	100.00%
Bootstrap support for G3J756 as seed ortholog is 100%.
Bootstrap support for A3GGM9 as seed ortholog is 83%.

Group of orthologs #2867. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:10 S.stipitis:12

G3J9U5              	100.00%		A3GGD8              	100.00%
Bootstrap support for G3J9U5 as seed ortholog is 87%.
Bootstrap support for A3GGD8 as seed ortholog is 86%.

Group of orthologs #2868. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:83

G3J626              	100.00%		A3LR77              	100.00%
Bootstrap support for G3J626 as seed ortholog is 100%.
Bootstrap support for A3LR77 as seed ortholog is 100%.

Group of orthologs #2869. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:83

G3JAT7              	100.00%		A3LNR4              	100.00%
Bootstrap support for G3JAT7 as seed ortholog is 100%.
Bootstrap support for A3LNR4 as seed ortholog is 100%.

Group of orthologs #2870. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:83

G3JQA0              	100.00%		A3GI44              	100.00%
Bootstrap support for G3JQA0 as seed ortholog is 100%.
Bootstrap support for A3GI44 as seed ortholog is 100%.

Group of orthologs #2871. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 S.stipitis:83

G3JSK4              	100.00%		A3LYN8              	100.00%
Bootstrap support for G3JSK4 as seed ortholog is 100%.
Bootstrap support for A3LYN8 as seed ortholog is 100%.

Group of orthologs #2872. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3J9E5              	100.00%		A3GHA4              	100.00%
Bootstrap support for G3J9E5 as seed ortholog is 100%.
Bootstrap support for A3GHA4 as seed ortholog is 100%.

Group of orthologs #2873. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JD10              	100.00%		A3LP02              	100.00%
Bootstrap support for G3JD10 as seed ortholog is 100%.
Bootstrap support for A3LP02 as seed ortholog is 100%.

Group of orthologs #2874. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JD55              	100.00%		A3LP49              	100.00%
Bootstrap support for G3JD55 as seed ortholog is 100%.
Bootstrap support for A3LP49 as seed ortholog is 100%.

Group of orthologs #2875. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3J6N0              	100.00%		A3LYU2              	100.00%
Bootstrap support for G3J6N0 as seed ortholog is 100%.
Bootstrap support for A3LYU2 as seed ortholog is 100%.

Group of orthologs #2876. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JJF4              	100.00%		A3LMV9              	100.00%
Bootstrap support for G3JJF4 as seed ortholog is 100%.
Bootstrap support for A3LMV9 as seed ortholog is 100%.

Group of orthologs #2877. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JBF9              	100.00%		A3LVZ4              	100.00%
Bootstrap support for G3JBF9 as seed ortholog is 100%.
Bootstrap support for A3LVZ4 as seed ortholog is 100%.

Group of orthologs #2878. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JE11              	100.00%		A3LUL7              	100.00%
Bootstrap support for G3JE11 as seed ortholog is 100%.
Bootstrap support for A3LUL7 as seed ortholog is 100%.

Group of orthologs #2879. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JUW1              	100.00%		A3GFE4              	100.00%
Bootstrap support for G3JUW1 as seed ortholog is 100%.
Bootstrap support for A3GFE4 as seed ortholog is 100%.

Group of orthologs #2880. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JRK6              	100.00%		A3LNG8              	100.00%
Bootstrap support for G3JRK6 as seed ortholog is 100%.
Bootstrap support for A3LNG8 as seed ortholog is 100%.

Group of orthologs #2881. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JRY7              	100.00%		A3LP20              	100.00%
Bootstrap support for G3JRY7 as seed ortholog is 100%.
Bootstrap support for A3LP20 as seed ortholog is 100%.

Group of orthologs #2882. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JUD1              	100.00%		A3LPD6              	100.00%
Bootstrap support for G3JUD1 as seed ortholog is 100%.
Bootstrap support for A3LPD6 as seed ortholog is 100%.

Group of orthologs #2883. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 S.stipitis:82

G3JRT8              	100.00%		A3LUM4              	100.00%
Bootstrap support for G3JRT8 as seed ortholog is 100%.
Bootstrap support for A3LUM4 as seed ortholog is 100%.

Group of orthologs #2884. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3J3R4              	100.00%		A3LPD2              	100.00%
Bootstrap support for G3J3R4 as seed ortholog is 100%.
Bootstrap support for A3LPD2 as seed ortholog is 100%.

Group of orthologs #2885. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3JCT2              	100.00%		A3GHT4              	100.00%
Bootstrap support for G3JCT2 as seed ortholog is 100%.
Bootstrap support for A3GHT4 as seed ortholog is 100%.

Group of orthologs #2886. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3J952              	100.00%		A3LWP7              	100.00%
Bootstrap support for G3J952 as seed ortholog is 100%.
Bootstrap support for A3LWP7 as seed ortholog is 100%.

Group of orthologs #2887. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3JE97              	100.00%		A3LS76              	100.00%
Bootstrap support for G3JE97 as seed ortholog is 100%.
Bootstrap support for A3LS76 as seed ortholog is 100%.

Group of orthologs #2888. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3JF70              	100.00%		A3LXI0              	100.00%
Bootstrap support for G3JF70 as seed ortholog is 100%.
Bootstrap support for A3LXI0 as seed ortholog is 100%.

Group of orthologs #2889. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3JCY3              	100.00%		A3M022              	100.00%
Bootstrap support for G3JCY3 as seed ortholog is 100%.
Bootstrap support for A3M022 as seed ortholog is 100%.

Group of orthologs #2890. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3JFX0              	100.00%		A3LZT8              	100.00%
Bootstrap support for G3JFX0 as seed ortholog is 100%.
Bootstrap support for A3LZT8 as seed ortholog is 100%.

Group of orthologs #2891. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 S.stipitis:81

G3JTJ0              	100.00%		A3LXJ9              	100.00%
Bootstrap support for G3JTJ0 as seed ortholog is 100%.
Bootstrap support for A3LXJ9 as seed ortholog is 100%.

Group of orthologs #2892. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 S.stipitis:80

G3JEV0              	100.00%		A3GF43              	100.00%
Bootstrap support for G3JEV0 as seed ortholog is 100%.
Bootstrap support for A3GF43 as seed ortholog is 100%.

Group of orthologs #2893. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 S.stipitis:80

G3JAW3              	100.00%		A3LPP2              	100.00%
Bootstrap support for G3JAW3 as seed ortholog is 100%.
Bootstrap support for A3LPP2 as seed ortholog is 100%.

Group of orthologs #2894. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 S.stipitis:80

G3JEC6              	100.00%		A3LU33              	100.00%
Bootstrap support for G3JEC6 as seed ortholog is 100%.
Bootstrap support for A3LU33 as seed ortholog is 100%.

Group of orthologs #2895. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:11 S.stipitis:80

G3JLL5              	100.00%		A3LQE0              	100.00%
Bootstrap support for G3JLL5 as seed ortholog is 80%.
Bootstrap support for A3LQE0 as seed ortholog is 100%.

Group of orthologs #2896. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 S.stipitis:80

G3JQS6              	100.00%		A3LUC1              	100.00%
Bootstrap support for G3JQS6 as seed ortholog is 100%.
Bootstrap support for A3LUC1 as seed ortholog is 100%.

Group of orthologs #2897. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 S.stipitis:80

G3JKS7              	100.00%		A3M0F4              	100.00%
Bootstrap support for G3JKS7 as seed ortholog is 100%.
Bootstrap support for A3M0F4 as seed ortholog is 100%.

Group of orthologs #2898. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3J7F5              	100.00%		A3GGN2              	100.00%
Bootstrap support for G3J7F5 as seed ortholog is 100%.
Bootstrap support for A3GGN2 as seed ortholog is 100%.

Group of orthologs #2899. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3J5Z1              	100.00%		A3LMZ1              	100.00%
Bootstrap support for G3J5Z1 as seed ortholog is 100%.
Bootstrap support for A3LMZ1 as seed ortholog is 100%.

Group of orthologs #2900. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:10 S.stipitis:79

G3J5K5              	100.00%		A3LU39              	100.00%
Bootstrap support for G3J5K5 as seed ortholog is 68%.
Alternative seed ortholog is G3J538 (10 bits away from this cluster)
Bootstrap support for A3LU39 as seed ortholog is 100%.

Group of orthologs #2901. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JEB1              	100.00%		A3GG83              	100.00%
Bootstrap support for G3JEB1 as seed ortholog is 100%.
Bootstrap support for A3GG83 as seed ortholog is 100%.

Group of orthologs #2902. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JC57              	100.00%		A3LQV4              	100.00%
Bootstrap support for G3JC57 as seed ortholog is 100%.
Bootstrap support for A3LQV4 as seed ortholog is 100%.

Group of orthologs #2903. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3J9X6              	100.00%		A3LVM0              	100.00%
Bootstrap support for G3J9X6 as seed ortholog is 100%.
Bootstrap support for A3LVM0 as seed ortholog is 100%.

Group of orthologs #2904. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JEZ3              	100.00%		A3LXJ5              	100.00%
Bootstrap support for G3JEZ3 as seed ortholog is 100%.
Bootstrap support for A3LXJ5 as seed ortholog is 100%.

Group of orthologs #2905. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JD77              	100.00%		A3LZC3              	100.00%
Bootstrap support for G3JD77 as seed ortholog is 100%.
Bootstrap support for A3LZC3 as seed ortholog is 100%.

Group of orthologs #2906. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JG99              	100.00%		A3LWD8              	100.00%
Bootstrap support for G3JG99 as seed ortholog is 100%.
Bootstrap support for A3LWD8 as seed ortholog is 100%.

Group of orthologs #2907. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JE64              	100.00%		A3LZ06              	100.00%
Bootstrap support for G3JE64 as seed ortholog is 100%.
Bootstrap support for A3LZ06 as seed ortholog is 100%.

Group of orthologs #2908. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:12 S.stipitis:79

G3JFA4              	100.00%		A3LZU6              	100.00%
Bootstrap support for G3JFA4 as seed ortholog is 61%.
Alternative seed ortholog is G3J3D6 (12 bits away from this cluster)
Bootstrap support for A3LZU6 as seed ortholog is 100%.

Group of orthologs #2909. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 S.stipitis:79

G3JKW8              	100.00%		A3LUI4              	100.00%
Bootstrap support for G3JKW8 as seed ortholog is 100%.
Bootstrap support for A3LUI4 as seed ortholog is 100%.

Group of orthologs #2910. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:38 S.stipitis:79

G3JTV8              	100.00%		A3LUD7              	100.00%
Bootstrap support for G3JTV8 as seed ortholog is 89%.
Bootstrap support for A3LUD7 as seed ortholog is 100%.

Group of orthologs #2911. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 S.stipitis:78

G3JSE2              	100.00%		A3LS09              	100.00%
G3JNK2              	24.56%		
Bootstrap support for G3JSE2 as seed ortholog is 100%.
Bootstrap support for A3LS09 as seed ortholog is 100%.

Group of orthologs #2912. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:7 S.stipitis:78

G3JC09              	100.00%		A3GGL9              	100.00%
Bootstrap support for G3JC09 as seed ortholog is 53%.
Alternative seed ortholog is G3JH36 (7 bits away from this cluster)
Bootstrap support for A3GGL9 as seed ortholog is 100%.

Group of orthologs #2913. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 S.stipitis:78

G3JK65              	100.00%		A3LSZ3              	100.00%
Bootstrap support for G3JK65 as seed ortholog is 100%.
Bootstrap support for A3LSZ3 as seed ortholog is 100%.

Group of orthologs #2914. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 S.stipitis:78

G3JV28              	100.00%		A3M0K1              	100.00%
Bootstrap support for G3JV28 as seed ortholog is 100%.
Bootstrap support for A3M0K1 as seed ortholog is 100%.

Group of orthologs #2915. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JAE1              	100.00%		A3LPA9              	100.00%
Bootstrap support for G3JAE1 as seed ortholog is 100%.
Bootstrap support for A3LPA9 as seed ortholog is 100%.

Group of orthologs #2916. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3J937              	100.00%		A3LQM1              	100.00%
Bootstrap support for G3J937 as seed ortholog is 100%.
Bootstrap support for A3LQM1 as seed ortholog is 100%.

Group of orthologs #2917. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JIU3              	100.00%		A3GGE1              	100.00%
Bootstrap support for G3JIU3 as seed ortholog is 100%.
Bootstrap support for A3GGE1 as seed ortholog is 100%.

Group of orthologs #2918. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JBW8              	100.00%		A3LSY1              	100.00%
Bootstrap support for G3JBW8 as seed ortholog is 100%.
Bootstrap support for A3LSY1 as seed ortholog is 100%.

Group of orthologs #2919. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JD00              	100.00%		A3LT48              	100.00%
Bootstrap support for G3JD00 as seed ortholog is 100%.
Bootstrap support for A3LT48 as seed ortholog is 100%.

Group of orthologs #2920. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JMS4              	100.00%		A3LRP3              	100.00%
Bootstrap support for G3JMS4 as seed ortholog is 100%.
Bootstrap support for A3LRP3 as seed ortholog is 100%.

Group of orthologs #2921. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JHU3              	100.00%		A3LXN4              	100.00%
Bootstrap support for G3JHU3 as seed ortholog is 100%.
Bootstrap support for A3LXN4 as seed ortholog is 100%.

Group of orthologs #2922. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JQT9              	100.00%		A3LPW2              	100.00%
Bootstrap support for G3JQT9 as seed ortholog is 100%.
Bootstrap support for A3LPW2 as seed ortholog is 100%.

Group of orthologs #2923. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 S.stipitis:77

G3JHN3              	100.00%		A3LZ27              	100.00%
Bootstrap support for G3JHN3 as seed ortholog is 100%.
Bootstrap support for A3LZ27 as seed ortholog is 100%.

Group of orthologs #2924. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JJE8              	100.00%		A3LQE8              	100.00%
                    	       		A3M0P9              	35.66%
Bootstrap support for G3JJE8 as seed ortholog is 100%.
Bootstrap support for A3LQE8 as seed ortholog is 100%.

Group of orthologs #2925. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3J6U1              	100.00%		A3LPP3              	100.00%
Bootstrap support for G3J6U1 as seed ortholog is 100%.
Bootstrap support for A3LPP3 as seed ortholog is 100%.

Group of orthologs #2926. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JBC5              	100.00%		A3LPU8              	100.00%
Bootstrap support for G3JBC5 as seed ortholog is 100%.
Bootstrap support for A3LPU8 as seed ortholog is 100%.

Group of orthologs #2927. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JDS8              	100.00%		A3LQM8              	100.00%
Bootstrap support for G3JDS8 as seed ortholog is 100%.
Bootstrap support for A3LQM8 as seed ortholog is 100%.

Group of orthologs #2928. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JIY2              	100.00%		A3LPH0              	100.00%
Bootstrap support for G3JIY2 as seed ortholog is 100%.
Bootstrap support for A3LPH0 as seed ortholog is 100%.

Group of orthologs #2929. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JDB7              	100.00%		A3LVF2              	100.00%
Bootstrap support for G3JDB7 as seed ortholog is 100%.
Bootstrap support for A3LVF2 as seed ortholog is 100%.

Group of orthologs #2930. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JMR5              	100.00%		A3LQ61              	100.00%
Bootstrap support for G3JMR5 as seed ortholog is 100%.
Bootstrap support for A3LQ61 as seed ortholog is 100%.

Group of orthologs #2931. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JKH7              	100.00%		A3LT91              	100.00%
Bootstrap support for G3JKH7 as seed ortholog is 100%.
Bootstrap support for A3LT91 as seed ortholog is 100%.

Group of orthologs #2932. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 S.stipitis:76

G3JM98              	100.00%		A3LY65              	100.00%
Bootstrap support for G3JM98 as seed ortholog is 100%.
Bootstrap support for A3LY65 as seed ortholog is 100%.

Group of orthologs #2933. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 S.stipitis:75

G3J9X1              	100.00%		A3LNQ6              	100.00%
                    	       		A3LY01              	6.01%
Bootstrap support for G3J9X1 as seed ortholog is 100%.
Bootstrap support for A3LNQ6 as seed ortholog is 100%.

Group of orthologs #2934. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 S.stipitis:75

G3JG27              	100.00%		A3LPM7              	100.00%
Bootstrap support for G3JG27 as seed ortholog is 100%.
Bootstrap support for A3LPM7 as seed ortholog is 100%.

Group of orthologs #2935. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 S.stipitis:75

G3JG41              	100.00%		A3LT15              	100.00%
Bootstrap support for G3JG41 as seed ortholog is 100%.
Bootstrap support for A3LT15 as seed ortholog is 100%.

Group of orthologs #2936. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 S.stipitis:75

G3JMG0              	100.00%		A3LTK5              	100.00%
Bootstrap support for G3JMG0 as seed ortholog is 100%.
Bootstrap support for A3LTK5 as seed ortholog is 100%.

Group of orthologs #2937. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3JUH2              	100.00%		A3LSC3              	100.00%
G3JUT4              	68.01%		
G3JDI3              	41.80%		
G3JG90              	7.23%		
Bootstrap support for G3JUH2 as seed ortholog is 100%.
Bootstrap support for A3LSC3 as seed ortholog is 100%.

Group of orthologs #2938. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3J4N9              	100.00%		A3GI77              	100.00%
Bootstrap support for G3J4N9 as seed ortholog is 100%.
Bootstrap support for A3GI77 as seed ortholog is 100%.

Group of orthologs #2939. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3J3Y7              	100.00%		A3LS03              	100.00%
Bootstrap support for G3J3Y7 as seed ortholog is 100%.
Bootstrap support for A3LS03 as seed ortholog is 100%.

Group of orthologs #2940. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3J6B0              	100.00%		A3LS66              	100.00%
Bootstrap support for G3J6B0 as seed ortholog is 100%.
Bootstrap support for A3LS66 as seed ortholog is 100%.

Group of orthologs #2941. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3J607              	100.00%		A3LTL1              	100.00%
Bootstrap support for G3J607 as seed ortholog is 100%.
Bootstrap support for A3LTL1 as seed ortholog is 100%.

Group of orthologs #2942. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3JAM5              	100.00%		A3LP22              	100.00%
Bootstrap support for G3JAM5 as seed ortholog is 100%.
Bootstrap support for A3LP22 as seed ortholog is 100%.

Group of orthologs #2943. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3J9B1              	100.00%		A3LS35              	100.00%
Bootstrap support for G3J9B1 as seed ortholog is 100%.
Bootstrap support for A3LS35 as seed ortholog is 100%.

Group of orthologs #2944. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3JAN8              	100.00%		A3LXH3              	100.00%
Bootstrap support for G3JAN8 as seed ortholog is 100%.
Bootstrap support for A3LXH3 as seed ortholog is 100%.

Group of orthologs #2945. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3JB18              	100.00%		A3LXX5              	100.00%
Bootstrap support for G3JB18 as seed ortholog is 100%.
Bootstrap support for A3LXX5 as seed ortholog is 100%.

Group of orthologs #2946. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3JJN4              	100.00%		A3LQ36              	100.00%
Bootstrap support for G3JJN4 as seed ortholog is 100%.
Bootstrap support for A3LQ36 as seed ortholog is 100%.

Group of orthologs #2947. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 S.stipitis:74

G3JUL0              	100.00%		A3LY28              	100.00%
Bootstrap support for G3JUL0 as seed ortholog is 100%.
Bootstrap support for A3LY28 as seed ortholog is 100%.

Group of orthologs #2948. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:73

G3JIH1              	100.00%		A3LP71              	100.00%
G3JLC3              	100.00%		
G3JGA4              	12.74%		
Bootstrap support for G3JIH1 as seed ortholog is 100%.
Bootstrap support for G3JLC3 as seed ortholog is 100%.
Bootstrap support for A3LP71 as seed ortholog is 100%.

Group of orthologs #2949. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:73

G3J6W0              	100.00%		A3GG04              	100.00%
Bootstrap support for G3J6W0 as seed ortholog is 100%.
Bootstrap support for A3GG04 as seed ortholog is 100%.

Group of orthologs #2950. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:73

G3J5N2              	100.00%		A3LPQ8              	100.00%
Bootstrap support for G3J5N2 as seed ortholog is 100%.
Bootstrap support for A3LPQ8 as seed ortholog is 100%.

Group of orthologs #2951. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:73

G3JCY4              	100.00%		A3LU17              	100.00%
Bootstrap support for G3JCY4 as seed ortholog is 100%.
Bootstrap support for A3LU17 as seed ortholog is 100%.

Group of orthologs #2952. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 S.stipitis:73

G3JNU4              	100.00%		A3LPR6              	100.00%
Bootstrap support for G3JNU4 as seed ortholog is 100%.
Bootstrap support for A3LPR6 as seed ortholog is 100%.

Group of orthologs #2953. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3J5D1              	100.00%		A3GFV5              	100.00%
Bootstrap support for G3J5D1 as seed ortholog is 100%.
Bootstrap support for A3GFV5 as seed ortholog is 100%.

Group of orthologs #2954. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3J447              	100.00%		A3LV03              	100.00%
Bootstrap support for G3J447 as seed ortholog is 100%.
Bootstrap support for A3LV03 as seed ortholog is 100%.

Group of orthologs #2955. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3JEC1              	100.00%		A3LS24              	100.00%
Bootstrap support for G3JEC1 as seed ortholog is 100%.
Bootstrap support for A3LS24 as seed ortholog is 100%.

Group of orthologs #2956. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3JPW6              	100.00%		A3LQU7              	100.00%
Bootstrap support for G3JPW6 as seed ortholog is 100%.
Bootstrap support for A3LQU7 as seed ortholog is 100%.

Group of orthologs #2957. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3JUZ7              	100.00%		A3GGY1              	100.00%
Bootstrap support for G3JUZ7 as seed ortholog is 100%.
Bootstrap support for A3GGY1 as seed ortholog is 100%.

Group of orthologs #2958. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3JN34              	100.00%		A3LTN9              	100.00%
Bootstrap support for G3JN34 as seed ortholog is 100%.
Bootstrap support for A3LTN9 as seed ortholog is 100%.

Group of orthologs #2959. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 S.stipitis:72

G3JL42              	100.00%		A3LX89              	100.00%
Bootstrap support for G3JL42 as seed ortholog is 100%.
Bootstrap support for A3LX89 as seed ortholog is 100%.

Group of orthologs #2960. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:71

G3J378              	100.00%		A3LQG6              	100.00%
Bootstrap support for G3J378 as seed ortholog is 100%.
Bootstrap support for A3LQG6 as seed ortholog is 100%.

Group of orthologs #2961. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:71

G3JAW9              	100.00%		A3LRT3              	100.00%
Bootstrap support for G3JAW9 as seed ortholog is 100%.
Bootstrap support for A3LRT3 as seed ortholog is 100%.

Group of orthologs #2962. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:14

G3JHB0              	100.00%		A3GIB6              	100.00%
Bootstrap support for G3JHB0 as seed ortholog is 100%.
Bootstrap support for A3GIB6 as seed ortholog is 65%.
Alternative seed ortholog is A3LVI8 (14 bits away from this cluster)

Group of orthologs #2963. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:71

G3JDZ3              	100.00%		A3LUL2              	100.00%
Bootstrap support for G3JDZ3 as seed ortholog is 100%.
Bootstrap support for A3LUL2 as seed ortholog is 100%.

Group of orthologs #2964. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:71

G3JPB2              	100.00%		A3LZH6              	100.00%
Bootstrap support for G3JPB2 as seed ortholog is 100%.
Bootstrap support for A3LZH6 as seed ortholog is 100%.

Group of orthologs #2965. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 S.stipitis:71

G3JPI4              	100.00%		A3LZF0              	100.00%
Bootstrap support for G3JPI4 as seed ortholog is 100%.
Bootstrap support for A3LZF0 as seed ortholog is 100%.

Group of orthologs #2966. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3JCY6              	100.00%		A3GFF4              	100.00%
Bootstrap support for G3JCY6 as seed ortholog is 100%.
Bootstrap support for A3GFF4 as seed ortholog is 100%.

Group of orthologs #2967. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:11 S.stipitis:70

G3JJ65              	100.00%		A3GFI9              	100.00%
Bootstrap support for G3JJ65 as seed ortholog is 64%.
Alternative seed ortholog is G3J7D9 (11 bits away from this cluster)
Bootstrap support for A3GFI9 as seed ortholog is 100%.

Group of orthologs #2968. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3JGE3              	100.00%		A3LPU6              	100.00%
Bootstrap support for G3JGE3 as seed ortholog is 100%.
Bootstrap support for A3LPU6 as seed ortholog is 100%.

Group of orthologs #2969. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3J7B8              	100.00%		A3LZS1              	100.00%
Bootstrap support for G3J7B8 as seed ortholog is 100%.
Bootstrap support for A3LZS1 as seed ortholog is 100%.

Group of orthologs #2970. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3J9K4              	100.00%		A3LZY5              	100.00%
Bootstrap support for G3J9K4 as seed ortholog is 100%.
Bootstrap support for A3LZY5 as seed ortholog is 100%.

Group of orthologs #2971. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3JG70              	100.00%		A3LXE8              	100.00%
Bootstrap support for G3JG70 as seed ortholog is 100%.
Bootstrap support for A3LXE8 as seed ortholog is 100%.

Group of orthologs #2972. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3JGE4              	100.00%		A3LZV1              	100.00%
Bootstrap support for G3JGE4 as seed ortholog is 100%.
Bootstrap support for A3LZV1 as seed ortholog is 100%.

Group of orthologs #2973. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3JLC8              	100.00%		A3LYC4              	100.00%
Bootstrap support for G3JLC8 as seed ortholog is 100%.
Bootstrap support for A3LYC4 as seed ortholog is 100%.

Group of orthologs #2974. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 S.stipitis:70

G3JLH5              	100.00%		A3LYG7              	100.00%
Bootstrap support for G3JLH5 as seed ortholog is 100%.
Bootstrap support for A3LYG7 as seed ortholog is 100%.

Group of orthologs #2975. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:13 S.stipitis:69

G3J598              	100.00%		A3LZA4              	100.00%
G3JRK0              	100.00%		A3LZA3              	19.87%
G3JQ61              	19.08%		
G3JLW6              	5.37%		
Bootstrap support for G3J598 as seed ortholog is 74%.
Alternative seed ortholog is G3J942 (13 bits away from this cluster)
Bootstrap support for G3JRK0 as seed ortholog is 76%.
Bootstrap support for A3LZA4 as seed ortholog is 100%.

Group of orthologs #2976. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3JUX5              	100.00%		A3LQH1              	100.00%
                    	       		A3LN68              	39.10%
Bootstrap support for G3JUX5 as seed ortholog is 100%.
Bootstrap support for A3LQH1 as seed ortholog is 100%.

Group of orthologs #2977. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3J401              	100.00%		A3GI23              	100.00%
Bootstrap support for G3J401 as seed ortholog is 100%.
Bootstrap support for A3GI23 as seed ortholog is 100%.

Group of orthologs #2978. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3J469              	100.00%		A3LQG2              	100.00%
Bootstrap support for G3J469 as seed ortholog is 100%.
Bootstrap support for A3LQG2 as seed ortholog is 100%.

Group of orthologs #2979. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3J413              	100.00%		A3LSH9              	100.00%
Bootstrap support for G3J413 as seed ortholog is 100%.
Bootstrap support for A3LSH9 as seed ortholog is 100%.

Group of orthologs #2980. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3J845              	100.00%		A3LP74              	100.00%
Bootstrap support for G3J845 as seed ortholog is 100%.
Bootstrap support for A3LP74 as seed ortholog is 100%.

Group of orthologs #2981. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3JEL8              	100.00%		A3LXX7              	100.00%
Bootstrap support for G3JEL8 as seed ortholog is 100%.
Bootstrap support for A3LXX7 as seed ortholog is 100%.

Group of orthologs #2982. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 S.stipitis:69

G3JLY1              	100.00%		A3LUB5              	100.00%
Bootstrap support for G3JLY1 as seed ortholog is 100%.
Bootstrap support for A3LUB5 as seed ortholog is 100%.

Group of orthologs #2983. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:68

G3J4J3              	100.00%		A3LND6              	100.00%
Bootstrap support for G3J4J3 as seed ortholog is 100%.
Bootstrap support for A3LND6 as seed ortholog is 100%.

Group of orthologs #2984. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:68

G3JBH6              	100.00%		A3LXQ2              	100.00%
Bootstrap support for G3JBH6 as seed ortholog is 100%.
Bootstrap support for A3LXQ2 as seed ortholog is 100%.

Group of orthologs #2985. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 S.stipitis:68

G3JBR8              	100.00%		A3LZD1              	100.00%
Bootstrap support for G3JBR8 as seed ortholog is 100%.
Bootstrap support for A3LZD1 as seed ortholog is 100%.

Group of orthologs #2986. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3J3U2              	100.00%		A3LS55              	100.00%
Bootstrap support for G3J3U2 as seed ortholog is 100%.
Bootstrap support for A3LS55 as seed ortholog is 100%.

Group of orthologs #2987. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JA87              	100.00%		A3GHW8              	100.00%
Bootstrap support for G3JA87 as seed ortholog is 100%.
Bootstrap support for A3GHW8 as seed ortholog is 100%.

Group of orthologs #2988. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3J6X8              	100.00%		A3LR68              	100.00%
Bootstrap support for G3J6X8 as seed ortholog is 100%.
Bootstrap support for A3LR68 as seed ortholog is 100%.

Group of orthologs #2989. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3J779              	100.00%		A3LRQ4              	100.00%
Bootstrap support for G3J779 as seed ortholog is 100%.
Bootstrap support for A3LRQ4 as seed ortholog is 100%.

Group of orthologs #2990. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JHC4              	100.00%		A3GET6              	100.00%
Bootstrap support for G3JHC4 as seed ortholog is 100%.
Bootstrap support for A3GET6 as seed ortholog is 100%.

Group of orthologs #2991. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JJS1              	100.00%		A3GFA3              	100.00%
Bootstrap support for G3JJS1 as seed ortholog is 100%.
Bootstrap support for A3GFA3 as seed ortholog is 100%.

Group of orthologs #2992. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JHZ9              	100.00%		A3LQ94              	100.00%
Bootstrap support for G3JHZ9 as seed ortholog is 100%.
Bootstrap support for A3LQ94 as seed ortholog is 100%.

Group of orthologs #2993. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JJW9              	100.00%		A3LNT0              	100.00%
Bootstrap support for G3JJW9 as seed ortholog is 100%.
Bootstrap support for A3LNT0 as seed ortholog is 100%.

Group of orthologs #2994. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JN07              	100.00%		A3LP58              	100.00%
Bootstrap support for G3JN07 as seed ortholog is 100%.
Bootstrap support for A3LP58 as seed ortholog is 100%.

Group of orthologs #2995. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JSN7              	100.00%		A3GG39              	100.00%
Bootstrap support for G3JSN7 as seed ortholog is 100%.
Bootstrap support for A3GG39 as seed ortholog is 100%.

Group of orthologs #2996. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JL48              	100.00%		A3M0F5              	100.00%
Bootstrap support for G3JL48 as seed ortholog is 100%.
Bootstrap support for A3M0F5 as seed ortholog is 100%.

Group of orthologs #2997. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 S.stipitis:67

G3JN93              	100.00%		A3LYG3              	100.00%
Bootstrap support for G3JN93 as seed ortholog is 100%.
Bootstrap support for A3LYG3 as seed ortholog is 100%.

Group of orthologs #2998. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3J3K2              	100.00%		A3LV09              	100.00%
Bootstrap support for G3J3K2 as seed ortholog is 100%.
Bootstrap support for A3LV09 as seed ortholog is 100%.

Group of orthologs #2999. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3J7Z5              	100.00%		A3LXC3              	100.00%
Bootstrap support for G3J7Z5 as seed ortholog is 100%.
Bootstrap support for A3LXC3 as seed ortholog is 100%.

Group of orthologs #3000. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3JKL0              	100.00%		A3GGU3              	100.00%
Bootstrap support for G3JKL0 as seed ortholog is 100%.
Bootstrap support for A3GGU3 as seed ortholog is 100%.

Group of orthologs #3001. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3JM95              	100.00%		A3LPL7              	100.00%
Bootstrap support for G3JM95 as seed ortholog is 100%.
Bootstrap support for A3LPL7 as seed ortholog is 100%.

Group of orthologs #3002. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3JQE7              	100.00%		A3LRE7              	100.00%
Bootstrap support for G3JQE7 as seed ortholog is 100%.
Bootstrap support for A3LRE7 as seed ortholog is 100%.

Group of orthologs #3003. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3JSX2              	100.00%		A3LQT4              	100.00%
Bootstrap support for G3JSX2 as seed ortholog is 100%.
Bootstrap support for A3LQT4 as seed ortholog is 100%.

Group of orthologs #3004. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3JNT6              	100.00%		A3LY88              	100.00%
Bootstrap support for G3JNT6 as seed ortholog is 100%.
Bootstrap support for A3LY88 as seed ortholog is 100%.

Group of orthologs #3005. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 S.stipitis:66

G3JUQ3              	100.00%		A3LVZ6              	100.00%
Bootstrap support for G3JUQ3 as seed ortholog is 100%.
Bootstrap support for A3LVZ6 as seed ortholog is 100%.

Group of orthologs #3006. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3J5U3              	100.00%		A3LS78              	100.00%
Bootstrap support for G3J5U3 as seed ortholog is 100%.
Bootstrap support for A3LS78 as seed ortholog is 100%.

Group of orthologs #3007. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3JB75              	100.00%		A3LNV5              	100.00%
Bootstrap support for G3JB75 as seed ortholog is 100%.
Bootstrap support for A3LNV5 as seed ortholog is 100%.

Group of orthologs #3008. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3J5S9              	100.00%		A3LUT2              	100.00%
Bootstrap support for G3J5S9 as seed ortholog is 100%.
Bootstrap support for A3LUT2 as seed ortholog is 100%.

Group of orthologs #3009. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3J508              	100.00%		A3LY59              	100.00%
Bootstrap support for G3J508 as seed ortholog is 100%.
Bootstrap support for A3LY59 as seed ortholog is 100%.

Group of orthologs #3010. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3JDJ2              	100.00%		A3LYM7              	100.00%
Bootstrap support for G3JDJ2 as seed ortholog is 100%.
Bootstrap support for A3LYM7 as seed ortholog is 100%.

Group of orthologs #3011. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3JLI5              	100.00%		A3LU53              	100.00%
Bootstrap support for G3JLI5 as seed ortholog is 100%.
Bootstrap support for A3LU53 as seed ortholog is 100%.

Group of orthologs #3012. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 S.stipitis:65

G3JTI9              	100.00%		A3LX82              	100.00%
Bootstrap support for G3JTI9 as seed ortholog is 100%.
Bootstrap support for A3LX82 as seed ortholog is 100%.

Group of orthologs #3013. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 S.stipitis:64

G3JLZ9              	100.00%		A3LWE5              	100.00%
                    	       		A3LWE6              	89.14%
                    	       		A3LWE3              	86.29%
                    	       		A3LWE4              	81.14%
                    	       		A3LWE7              	56.19%
Bootstrap support for G3JLZ9 as seed ortholog is 100%.
Bootstrap support for A3LWE5 as seed ortholog is 100%.

Group of orthologs #3014. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 S.stipitis:64

G3JI39              	100.00%		A3GGV0              	100.00%
G3JGC5              	10.68%		
Bootstrap support for G3JI39 as seed ortholog is 100%.
Bootstrap support for A3GGV0 as seed ortholog is 100%.

Group of orthologs #3015. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 S.stipitis:64

G3JKE6              	100.00%		A3GIB5              	100.00%
Bootstrap support for G3JKE6 as seed ortholog is 100%.
Bootstrap support for A3GIB5 as seed ortholog is 100%.

Group of orthologs #3016. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 S.stipitis:64

G3JLH4              	100.00%		A3LYG6              	100.00%
Bootstrap support for G3JLH4 as seed ortholog is 100%.
Bootstrap support for A3LYG6 as seed ortholog is 100%.

Group of orthologs #3017. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 S.stipitis:64

G3JSR1              	100.00%		A3LW83              	100.00%
Bootstrap support for G3JSR1 as seed ortholog is 100%.
Bootstrap support for A3LW83 as seed ortholog is 100%.

Group of orthologs #3018. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 S.stipitis:63

G3J8N1              	100.00%		A3LVJ8              	100.00%
Bootstrap support for G3J8N1 as seed ortholog is 100%.
Bootstrap support for A3LVJ8 as seed ortholog is 100%.

Group of orthologs #3019. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JDV6              	100.00%		A3M0C4              	100.00%
                    	       		A3LTZ3              	16.81%
Bootstrap support for G3JDV6 as seed ortholog is 100%.
Bootstrap support for A3M0C4 as seed ortholog is 100%.

Group of orthologs #3020. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JE66              	100.00%		A3LN75              	100.00%
Bootstrap support for G3JE66 as seed ortholog is 100%.
Bootstrap support for A3LN75 as seed ortholog is 100%.

Group of orthologs #3021. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JDU4              	100.00%		A3LNQ3              	100.00%
Bootstrap support for G3JDU4 as seed ortholog is 100%.
Bootstrap support for A3LNQ3 as seed ortholog is 100%.

Group of orthologs #3022. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JFW7              	100.00%		A3GI20              	100.00%
Bootstrap support for G3JFW7 as seed ortholog is 100%.
Bootstrap support for A3GI20 as seed ortholog is 100%.

Group of orthologs #3023. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JJF8              	100.00%		A3LN19              	100.00%
Bootstrap support for G3JJF8 as seed ortholog is 100%.
Bootstrap support for A3LN19 as seed ortholog is 100%.

Group of orthologs #3024. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JGG9              	100.00%		A3LSC4              	100.00%
Bootstrap support for G3JGG9 as seed ortholog is 100%.
Bootstrap support for A3LSC4 as seed ortholog is 100%.

Group of orthologs #3025. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JD58              	100.00%		A3LVS1              	100.00%
Bootstrap support for G3JD58 as seed ortholog is 100%.
Bootstrap support for A3LVS1 as seed ortholog is 100%.

Group of orthologs #3026. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 S.stipitis:62

G3JKS1              	100.00%		A3LTC7              	100.00%
Bootstrap support for G3JKS1 as seed ortholog is 100%.
Bootstrap support for A3LTC7 as seed ortholog is 100%.

Group of orthologs #3027. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JM58              	100.00%		A3LUR2              	100.00%
G3JAQ5              	7.08%		A3GFU7              	19.23%
G3JC11              	5.99%		
Bootstrap support for G3JM58 as seed ortholog is 100%.
Bootstrap support for A3LUR2 as seed ortholog is 100%.

Group of orthologs #3028. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JIP2              	100.00%		A3GFE0              	100.00%
Bootstrap support for G3JIP2 as seed ortholog is 100%.
Bootstrap support for A3GFE0 as seed ortholog is 100%.

Group of orthologs #3029. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JK17              	100.00%		A3GG18              	100.00%
Bootstrap support for G3JK17 as seed ortholog is 100%.
Bootstrap support for A3GG18 as seed ortholog is 100%.

Group of orthologs #3030. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JJE2              	100.00%		A3GHX0              	100.00%
Bootstrap support for G3JJE2 as seed ortholog is 100%.
Bootstrap support for A3GHX0 as seed ortholog is 100%.

Group of orthologs #3031. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JAF7              	100.00%		A3LWG7              	100.00%
Bootstrap support for G3JAF7 as seed ortholog is 100%.
Bootstrap support for A3LWG7 as seed ortholog is 100%.

Group of orthologs #3032. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JJU1              	100.00%		A3M031              	100.00%
Bootstrap support for G3JJU1 as seed ortholog is 100%.
Bootstrap support for A3M031 as seed ortholog is 100%.

Group of orthologs #3033. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 S.stipitis:61

G3JTK6              	100.00%		A3LY06              	100.00%
Bootstrap support for G3JTK6 as seed ortholog is 100%.
Bootstrap support for A3LY06 as seed ortholog is 100%.

Group of orthologs #3034. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:60

G3J2P8              	100.00%		A3LUU7              	100.00%
                    	       		A3LQJ4              	18.41%
Bootstrap support for G3J2P8 as seed ortholog is 100%.
Bootstrap support for A3LUU7 as seed ortholog is 100%.

Group of orthologs #3035. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:60

G3JEB3              	100.00%		A3GI00              	100.00%
Bootstrap support for G3JEB3 as seed ortholog is 100%.
Bootstrap support for A3GI00 as seed ortholog is 100%.

Group of orthologs #3036. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:60

G3J981              	100.00%		A3LSZ0              	100.00%
Bootstrap support for G3J981 as seed ortholog is 100%.
Bootstrap support for A3LSZ0 as seed ortholog is 100%.

Group of orthologs #3037. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:60

G3J786              	100.00%		A3LY13              	100.00%
Bootstrap support for G3J786 as seed ortholog is 100%.
Bootstrap support for A3LY13 as seed ortholog is 100%.

Group of orthologs #3038. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 S.stipitis:60

G3JRZ7              	100.00%		A3LW29              	100.00%
Bootstrap support for G3JRZ7 as seed ortholog is 100%.
Bootstrap support for A3LW29 as seed ortholog is 100%.

Group of orthologs #3039. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 S.stipitis:59

G3J2L8              	100.00%		A3LUG2              	100.00%
Bootstrap support for G3J2L8 as seed ortholog is 100%.
Bootstrap support for A3LUG2 as seed ortholog is 100%.

Group of orthologs #3040. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 S.stipitis:59

G3JKE5              	100.00%		A3LMT9              	100.00%
Bootstrap support for G3JKE5 as seed ortholog is 100%.
Bootstrap support for A3LMT9 as seed ortholog is 100%.

Group of orthologs #3041. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 S.stipitis:59

G3JJU2              	100.00%		A3LTG8              	100.00%
Bootstrap support for G3JJU2 as seed ortholog is 100%.
Bootstrap support for A3LTG8 as seed ortholog is 100%.

Group of orthologs #3042. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 S.stipitis:59

G3JNK5              	100.00%		A3LZ05              	100.00%
Bootstrap support for G3JNK5 as seed ortholog is 100%.
Bootstrap support for A3LZ05 as seed ortholog is 100%.

Group of orthologs #3043. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:8

G3J9X7              	100.00%		A3LNS9              	100.00%
Bootstrap support for G3J9X7 as seed ortholog is 100%.
Bootstrap support for A3LNS9 as seed ortholog is 65%.
Alternative seed ortholog is A3LSE2 (8 bits away from this cluster)

Group of orthologs #3044. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:58

G3JF87              	100.00%		A3GFU0              	100.00%
Bootstrap support for G3JF87 as seed ortholog is 100%.
Bootstrap support for A3GFU0 as seed ortholog is 100%.

Group of orthologs #3045. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:58

G3J5C6              	100.00%		A3LZC8              	100.00%
Bootstrap support for G3J5C6 as seed ortholog is 100%.
Bootstrap support for A3LZC8 as seed ortholog is 100%.

Group of orthologs #3046. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:58

G3JPY8              	100.00%		A3LTA1              	100.00%
Bootstrap support for G3JPY8 as seed ortholog is 100%.
Bootstrap support for A3LTA1 as seed ortholog is 100%.

Group of orthologs #3047. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 S.stipitis:58

G3JQE2              	100.00%		A3LVL1              	100.00%
Bootstrap support for G3JQE2 as seed ortholog is 100%.
Bootstrap support for A3LVL1 as seed ortholog is 100%.

Group of orthologs #3048. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3J8W0              	100.00%		A3LZX0              	100.00%
                    	       		A3LWH0              	48.74%
Bootstrap support for G3J8W0 as seed ortholog is 100%.
Bootstrap support for A3LZX0 as seed ortholog is 100%.

Group of orthologs #3049. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3JTY8              	100.00%		A3M0M5              	100.00%
                    	       		A3M0M3              	23.76%
Bootstrap support for G3JTY8 as seed ortholog is 100%.
Bootstrap support for A3M0M5 as seed ortholog is 100%.

Group of orthologs #3050. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3J7H0              	100.00%		A3GF26              	100.00%
Bootstrap support for G3J7H0 as seed ortholog is 100%.
Bootstrap support for A3GF26 as seed ortholog is 100%.

Group of orthologs #3051. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3J4S4              	100.00%		A3GI04              	100.00%
Bootstrap support for G3J4S4 as seed ortholog is 100%.
Bootstrap support for A3GI04 as seed ortholog is 100%.

Group of orthologs #3052. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3J6H3              	100.00%		A3LNC7              	100.00%
Bootstrap support for G3J6H3 as seed ortholog is 100%.
Bootstrap support for A3LNC7 as seed ortholog is 100%.

Group of orthologs #3053. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3J8A2              	100.00%		A3LSL6              	100.00%
Bootstrap support for G3J8A2 as seed ortholog is 100%.
Bootstrap support for A3LSL6 as seed ortholog is 100%.

Group of orthologs #3054. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3J7V2              	100.00%		A3LWJ1              	100.00%
Bootstrap support for G3J7V2 as seed ortholog is 100%.
Bootstrap support for A3LWJ1 as seed ortholog is 100%.

Group of orthologs #3055. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3JJ45              	100.00%		A3LVB3              	100.00%
Bootstrap support for G3JJ45 as seed ortholog is 100%.
Bootstrap support for A3LVB3 as seed ortholog is 100%.

Group of orthologs #3056. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3JMB1              	100.00%		A3LWV2              	100.00%
Bootstrap support for G3JMB1 as seed ortholog is 100%.
Bootstrap support for A3LWV2 as seed ortholog is 100%.

Group of orthologs #3057. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 S.stipitis:57

G3JNX5              	100.00%		A3LZ91              	100.00%
Bootstrap support for G3JNX5 as seed ortholog is 100%.
Bootstrap support for A3LZ91 as seed ortholog is 100%.

Group of orthologs #3058. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:56

G3JS42              	100.00%		A3LSQ7              	100.00%
G3JA21              	16.30%		A3LSQ6              	35.79%
G3JUE4              	7.84%		A3M0N8              	32.10%
                    	       		A3M0N9              	30.63%
                    	       		A3GFE7              	29.52%
Bootstrap support for G3JS42 as seed ortholog is 100%.
Bootstrap support for A3LSQ7 as seed ortholog is 100%.

Group of orthologs #3059. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:56

G3J2S3              	100.00%		A3GID8              	100.00%
Bootstrap support for G3J2S3 as seed ortholog is 100%.
Bootstrap support for A3GID8 as seed ortholog is 100%.

Group of orthologs #3060. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:56

G3J501              	100.00%		A3LUA9              	100.00%
Bootstrap support for G3J501 as seed ortholog is 100%.
Bootstrap support for A3LUA9 as seed ortholog is 100%.

Group of orthologs #3061. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:56

G3JET4              	100.00%		A3LPM0              	100.00%
Bootstrap support for G3JET4 as seed ortholog is 100%.
Bootstrap support for A3LPM0 as seed ortholog is 100%.

Group of orthologs #3062. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:56

G3J5X9              	100.00%		A3LYV3              	100.00%
Bootstrap support for G3J5X9 as seed ortholog is 100%.
Bootstrap support for A3LYV3 as seed ortholog is 100%.

Group of orthologs #3063. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 S.stipitis:56

G3JFN6              	100.00%		A3LPB6              	100.00%
Bootstrap support for G3JFN6 as seed ortholog is 100%.
Bootstrap support for A3LPB6 as seed ortholog is 100%.

Group of orthologs #3064. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3J4D9              	100.00%		A3GFW6              	100.00%
Bootstrap support for G3J4D9 as seed ortholog is 100%.
Bootstrap support for A3GFW6 as seed ortholog is 100%.

Group of orthologs #3065. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3J654              	100.00%		A3LPN4              	100.00%
Bootstrap support for G3J654 as seed ortholog is 100%.
Bootstrap support for A3LPN4 as seed ortholog is 100%.

Group of orthologs #3066. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3JR22              	100.00%		A3GGV5              	100.00%
Bootstrap support for G3JR22 as seed ortholog is 100%.
Bootstrap support for A3GGV5 as seed ortholog is 100%.

Group of orthologs #3067. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3JGU2              	100.00%		A3LWC6              	100.00%
Bootstrap support for G3JGU2 as seed ortholog is 100%.
Bootstrap support for A3LWC6 as seed ortholog is 100%.

Group of orthologs #3068. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3JFX8              	100.00%		A3LY50              	100.00%
Bootstrap support for G3JFX8 as seed ortholog is 100%.
Bootstrap support for A3LY50 as seed ortholog is 100%.

Group of orthologs #3069. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3JI73              	100.00%		A3LX07              	100.00%
Bootstrap support for G3JI73 as seed ortholog is 100%.
Bootstrap support for A3LX07 as seed ortholog is 100%.

Group of orthologs #3070. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 S.stipitis:55

G3JJD7              	100.00%		A3LY57              	100.00%
Bootstrap support for G3JJD7 as seed ortholog is 100%.
Bootstrap support for A3LY57 as seed ortholog is 100%.

Group of orthologs #3071. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:54

G3JEJ6              	100.00%		A3GI56              	100.00%
Bootstrap support for G3JEJ6 as seed ortholog is 100%.
Bootstrap support for A3GI56 as seed ortholog is 100%.

Group of orthologs #3072. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:54

G3JDY2              	100.00%		A3LS51              	100.00%
Bootstrap support for G3JDY2 as seed ortholog is 100%.
Bootstrap support for A3LS51 as seed ortholog is 100%.

Group of orthologs #3073. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:54

G3JA82              	100.00%		A3LY18              	100.00%
Bootstrap support for G3JA82 as seed ortholog is 100%.
Bootstrap support for A3LY18 as seed ortholog is 100%.

Group of orthologs #3074. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:54

G3JN90              	100.00%		A3LR78              	100.00%
Bootstrap support for G3JN90 as seed ortholog is 100%.
Bootstrap support for A3LR78 as seed ortholog is 100%.

Group of orthologs #3075. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:54

G3JQN2              	100.00%		A3LSZ9              	100.00%
Bootstrap support for G3JQN2 as seed ortholog is 100%.
Bootstrap support for A3LSZ9 as seed ortholog is 100%.

Group of orthologs #3076. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 S.stipitis:54

G3JLR4              	100.00%		A3LZX4              	100.00%
Bootstrap support for G3JLR4 as seed ortholog is 100%.
Bootstrap support for A3LZX4 as seed ortholog is 100%.

Group of orthologs #3077. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 S.stipitis:53

G3JQD7              	100.00%		A3GEY8              	100.00%
Bootstrap support for G3JQD7 as seed ortholog is 100%.
Bootstrap support for A3GEY8 as seed ortholog is 100%.

Group of orthologs #3078. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 S.stipitis:53

G3J9K1              	100.00%		A3M0M2              	100.00%
Bootstrap support for G3J9K1 as seed ortholog is 100%.
Bootstrap support for A3M0M2 as seed ortholog is 100%.

Group of orthologs #3079. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 S.stipitis:52

G3JJL7              	100.00%		A3GG23              	100.00%
Bootstrap support for G3JJL7 as seed ortholog is 100%.
Bootstrap support for A3GG23 as seed ortholog is 100%.

Group of orthologs #3080. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 S.stipitis:52

G3JCM7              	100.00%		A3LUY0              	100.00%
Bootstrap support for G3JCM7 as seed ortholog is 100%.
Bootstrap support for A3LUY0 as seed ortholog is 100%.

Group of orthologs #3081. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 S.stipitis:52

G3JNX6              	100.00%		A3LMZ9              	100.00%
Bootstrap support for G3JNX6 as seed ortholog is 100%.
Bootstrap support for A3LMZ9 as seed ortholog is 100%.

Group of orthologs #3082. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 S.stipitis:52

G3JEB5              	100.00%		A3M093              	100.00%
Bootstrap support for G3JEB5 as seed ortholog is 100%.
Bootstrap support for A3M093 as seed ortholog is 100%.

Group of orthologs #3083. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 S.stipitis:51

G3J7K1              	100.00%		A3GGH8              	100.00%
Bootstrap support for G3J7K1 as seed ortholog is 100%.
Bootstrap support for A3GGH8 as seed ortholog is 100%.

Group of orthologs #3084. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 S.stipitis:51

G3J340              	100.00%		A3LZ75              	100.00%
Bootstrap support for G3J340 as seed ortholog is 100%.
Bootstrap support for A3LZ75 as seed ortholog is 100%.

Group of orthologs #3085. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 S.stipitis:51

G3J7A3              	100.00%		A3LZR5              	100.00%
Bootstrap support for G3J7A3 as seed ortholog is 100%.
Bootstrap support for A3LZR5 as seed ortholog is 100%.

Group of orthologs #3086. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3J5K0              	100.00%		A3LWA0              	100.00%
Bootstrap support for G3J5K0 as seed ortholog is 100%.
Bootstrap support for A3LWA0 as seed ortholog is 100%.

Group of orthologs #3087. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3J5V0              	100.00%		A3LZ41              	100.00%
Bootstrap support for G3J5V0 as seed ortholog is 100%.
Bootstrap support for A3LZ41 as seed ortholog is 100%.

Group of orthologs #3088. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3JKH1              	100.00%		A3GFY1              	100.00%
Bootstrap support for G3JKH1 as seed ortholog is 100%.
Bootstrap support for A3GFY1 as seed ortholog is 100%.

Group of orthologs #3089. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3JC41              	100.00%		A3LVA7              	100.00%
Bootstrap support for G3JC41 as seed ortholog is 100%.
Bootstrap support for A3LVA7 as seed ortholog is 100%.

Group of orthologs #3090. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3JBL1              	100.00%		A3LWJ7              	100.00%
Bootstrap support for G3JBL1 as seed ortholog is 100%.
Bootstrap support for A3LWJ7 as seed ortholog is 100%.

Group of orthologs #3091. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3JNP7              	100.00%		A3LTS2              	100.00%
Bootstrap support for G3JNP7 as seed ortholog is 100%.
Bootstrap support for A3LTS2 as seed ortholog is 100%.

Group of orthologs #3092. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 S.stipitis:50

G3JS76              	100.00%		A3LXF5              	100.00%
Bootstrap support for G3JS76 as seed ortholog is 100%.
Bootstrap support for A3LXF5 as seed ortholog is 100%.

Group of orthologs #3093. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JIM0              	100.00%		A3LNT7              	100.00%
                    	       		A3LNT6              	48.25%
                    	       		A3LNT8              	14.29%
Bootstrap support for G3JIM0 as seed ortholog is 100%.
Bootstrap support for A3LNT7 as seed ortholog is 100%.

Group of orthologs #3094. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3J3T1              	100.00%		A3LSV5              	100.00%
Bootstrap support for G3J3T1 as seed ortholog is 100%.
Bootstrap support for A3LSV5 as seed ortholog is 100%.

Group of orthologs #3095. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JA60              	100.00%		A3LNP3              	100.00%
Bootstrap support for G3JA60 as seed ortholog is 100%.
Bootstrap support for A3LNP3 as seed ortholog is 100%.

Group of orthologs #3096. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JCQ7              	100.00%		A3GIE3              	100.00%
Bootstrap support for G3JCQ7 as seed ortholog is 100%.
Bootstrap support for A3GIE3 as seed ortholog is 100%.

Group of orthologs #3097. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JDL6              	100.00%		A3GI31              	100.00%
Bootstrap support for G3JDL6 as seed ortholog is 100%.
Bootstrap support for A3GI31 as seed ortholog is 100%.

Group of orthologs #3098. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3J5B0              	100.00%		A3LX10              	100.00%
Bootstrap support for G3J5B0 as seed ortholog is 100%.
Bootstrap support for A3LX10 as seed ortholog is 100%.

Group of orthologs #3099. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3J4Y5              	100.00%		A3LYF8              	100.00%
Bootstrap support for G3J4Y5 as seed ortholog is 100%.
Bootstrap support for A3LYF8 as seed ortholog is 100%.

Group of orthologs #3100. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JCT4              	100.00%		A3LTI8              	100.00%
Bootstrap support for G3JCT4 as seed ortholog is 100%.
Bootstrap support for A3LTI8 as seed ortholog is 100%.

Group of orthologs #3101. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 S.stipitis:49

G3JN08              	100.00%		A3LY95              	100.00%
Bootstrap support for G3JN08 as seed ortholog is 100%.
Bootstrap support for A3LY95 as seed ortholog is 100%.

Group of orthologs #3102. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 S.stipitis:48

G3J8U8              	100.00%		A3GFC6              	100.00%
Bootstrap support for G3J8U8 as seed ortholog is 100%.
Bootstrap support for A3GFC6 as seed ortholog is 100%.

Group of orthologs #3103. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 S.stipitis:48

G3J897              	100.00%		A3LRM9              	100.00%
Bootstrap support for G3J897 as seed ortholog is 100%.
Bootstrap support for A3LRM9 as seed ortholog is 100%.

Group of orthologs #3104. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 S.stipitis:48

G3JEJ9              	100.00%		A3LXC0              	100.00%
Bootstrap support for G3JEJ9 as seed ortholog is 100%.
Bootstrap support for A3LXC0 as seed ortholog is 100%.

Group of orthologs #3105. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 S.stipitis:47

G3J9X5              	100.00%		A3LUU5              	100.00%
Bootstrap support for G3J9X5 as seed ortholog is 100%.
Bootstrap support for A3LUU5 as seed ortholog is 100%.

Group of orthologs #3106. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 S.stipitis:47

G3JAZ2              	100.00%		A3LV84              	100.00%
Bootstrap support for G3JAZ2 as seed ortholog is 100%.
Bootstrap support for A3LV84 as seed ortholog is 100%.

Group of orthologs #3107. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 S.stipitis:47

G3JN09              	100.00%		A3GFN1              	100.00%
Bootstrap support for G3JN09 as seed ortholog is 100%.
Bootstrap support for A3GFN1 as seed ortholog is 100%.

Group of orthologs #3108. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 S.stipitis:46

G3JQQ4              	100.00%		A3LZ61              	100.00%
Bootstrap support for G3JQQ4 as seed ortholog is 100%.
Bootstrap support for A3LZ61 as seed ortholog is 100%.

Group of orthologs #3109. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 S.stipitis:45

G3JA12              	100.00%		A3LUZ8              	100.00%
Bootstrap support for G3JA12 as seed ortholog is 100%.
Bootstrap support for A3LUZ8 as seed ortholog is 100%.

Group of orthologs #3110. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 S.stipitis:45

G3JKB1              	100.00%		A3LNT5              	100.00%
Bootstrap support for G3JKB1 as seed ortholog is 100%.
Bootstrap support for A3LNT5 as seed ortholog is 100%.

Group of orthologs #3111. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 S.stipitis:45

G3JRQ4              	100.00%		A3LVG1              	100.00%
Bootstrap support for G3JRQ4 as seed ortholog is 100%.
Bootstrap support for A3LVG1 as seed ortholog is 100%.

Group of orthologs #3112. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:44

G3JFW8              	100.00%		A3GGM4              	100.00%
Bootstrap support for G3JFW8 as seed ortholog is 100%.
Bootstrap support for A3GGM4 as seed ortholog is 100%.

Group of orthologs #3113. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:44

G3JDM5              	100.00%		A3LSE8              	100.00%
Bootstrap support for G3JDM5 as seed ortholog is 100%.
Bootstrap support for A3LSE8 as seed ortholog is 100%.

Group of orthologs #3114. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:44

G3JQ48              	100.00%		A3GI32              	100.00%
Bootstrap support for G3JQ48 as seed ortholog is 100%.
Bootstrap support for A3GI32 as seed ortholog is 100%.

Group of orthologs #3115. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:44

G3JTM5              	100.00%		A3GF13              	100.00%
Bootstrap support for G3JTM5 as seed ortholog is 100%.
Bootstrap support for A3GF13 as seed ortholog is 100%.

Group of orthologs #3116. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 S.stipitis:44

G3JJS0              	100.00%		A3LZP9              	100.00%
Bootstrap support for G3JJS0 as seed ortholog is 100%.
Bootstrap support for A3LZP9 as seed ortholog is 100%.

Group of orthologs #3117. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 S.stipitis:43

G3J3Z0              	100.00%		A3LTM7              	100.00%
Bootstrap support for G3J3Z0 as seed ortholog is 100%.
Bootstrap support for A3LTM7 as seed ortholog is 100%.

Group of orthologs #3118. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 S.stipitis:43

G3JFW6              	100.00%		A3GFK4              	100.00%
Bootstrap support for G3JFW6 as seed ortholog is 100%.
Bootstrap support for A3GFK4 as seed ortholog is 100%.

Group of orthologs #3119. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 S.stipitis:43

G3J8Y5              	100.00%		A3LWK1              	100.00%
Bootstrap support for G3J8Y5 as seed ortholog is 100%.
Bootstrap support for A3LWK1 as seed ortholog is 100%.

Group of orthologs #3120. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 S.stipitis:43

G3JFH5              	100.00%		A3LWC3              	100.00%
Bootstrap support for G3JFH5 as seed ortholog is 100%.
Bootstrap support for A3LWC3 as seed ortholog is 100%.

Group of orthologs #3121. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 S.stipitis:43

G3JN80              	100.00%		A3LV70              	100.00%
Bootstrap support for G3JN80 as seed ortholog is 100%.
Bootstrap support for A3LV70 as seed ortholog is 100%.

Group of orthologs #3122. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 S.stipitis:43

G3JPF6              	100.00%		A3LVR1              	100.00%
Bootstrap support for G3JPF6 as seed ortholog is 100%.
Bootstrap support for A3LVR1 as seed ortholog is 100%.

Group of orthologs #3123. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 S.stipitis:42

G3J622              	100.00%		A3LVI5              	100.00%
G3JF73              	33.83%		A3LN06              	7.15%
G3J6V0              	7.46%		
Bootstrap support for G3J622 as seed ortholog is 100%.
Bootstrap support for A3LVI5 as seed ortholog is 100%.

Group of orthologs #3124. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 S.stipitis:42

G3JN71              	100.00%		A3GGK6              	100.00%
Bootstrap support for G3JN71 as seed ortholog is 100%.
Bootstrap support for A3GGK6 as seed ortholog is 100%.

Group of orthologs #3125. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 S.stipitis:41

G3JF63              	100.00%		A3LSX7              	100.00%
Bootstrap support for G3JF63 as seed ortholog is 100%.
Bootstrap support for A3LSX7 as seed ortholog is 100%.

Group of orthologs #3126. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 S.stipitis:41

G3JS85              	100.00%		A3LMS1              	100.00%
Bootstrap support for G3JS85 as seed ortholog is 100%.
Bootstrap support for A3LMS1 as seed ortholog is 100%.