###################################
2118 groups of orthologs
2433 in-paralogs from C.militaris
3005 in-paralogs from D.pseudoobscura
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4230 bits
Score difference with first non-orthologous sequence - C.militaris:4230 D.pseudoobscura:2965

G3JE06              	100.00%		Q29EA0              	100.00%
Bootstrap support for G3JE06 as seed ortholog is 100%.
Bootstrap support for Q29EA0 as seed ortholog is 100%.

Group of orthologs #2. Best score 3507 bits
Score difference with first non-orthologous sequence - C.militaris:3507 D.pseudoobscura:3507

G3J5Z4              	100.00%		Q293E2              	100.00%
Bootstrap support for G3J5Z4 as seed ortholog is 100%.
Bootstrap support for Q293E2 as seed ortholog is 100%.

Group of orthologs #3. Best score 2231 bits
Score difference with first non-orthologous sequence - C.militaris:2231 D.pseudoobscura:2231

G3JB11              	100.00%		Q29EX1              	100.00%
Bootstrap support for G3JB11 as seed ortholog is 100%.
Bootstrap support for Q29EX1 as seed ortholog is 100%.

Group of orthologs #4. Best score 2079 bits
Score difference with first non-orthologous sequence - C.militaris:2079 D.pseudoobscura:2079

G3JLQ3              	100.00%		Q2M0I9              	100.00%
Bootstrap support for G3JLQ3 as seed ortholog is 100%.
Bootstrap support for Q2M0I9 as seed ortholog is 100%.

Group of orthologs #5. Best score 1992 bits
Score difference with first non-orthologous sequence - C.militaris:1992 D.pseudoobscura:1992

G3JDT0              	100.00%		Q29HK5              	100.00%
Bootstrap support for G3JDT0 as seed ortholog is 100%.
Bootstrap support for Q29HK5 as seed ortholog is 100%.

Group of orthologs #6. Best score 1782 bits
Score difference with first non-orthologous sequence - C.militaris:1782 D.pseudoobscura:1782

G3JMH6              	100.00%		Q29CS2              	100.00%
Bootstrap support for G3JMH6 as seed ortholog is 100%.
Bootstrap support for Q29CS2 as seed ortholog is 100%.

Group of orthologs #7. Best score 1770 bits
Score difference with first non-orthologous sequence - C.militaris:1770 D.pseudoobscura:1770

G3JUL1              	100.00%		Q290Y2              	100.00%
Bootstrap support for G3JUL1 as seed ortholog is 100%.
Bootstrap support for Q290Y2 as seed ortholog is 100%.

Group of orthologs #8. Best score 1648 bits
Score difference with first non-orthologous sequence - C.militaris:1648 D.pseudoobscura:1648

G3JF86              	100.00%		Q29L62              	100.00%
Bootstrap support for G3JF86 as seed ortholog is 100%.
Bootstrap support for Q29L62 as seed ortholog is 100%.

Group of orthologs #9. Best score 1601 bits
Score difference with first non-orthologous sequence - C.militaris:884 D.pseudoobscura:1601

G3JJZ0              	100.00%		Q29IN2              	100.00%
Bootstrap support for G3JJZ0 as seed ortholog is 100%.
Bootstrap support for Q29IN2 as seed ortholog is 100%.

Group of orthologs #10. Best score 1585 bits
Score difference with first non-orthologous sequence - C.militaris:1585 D.pseudoobscura:1585

G3JE54              	100.00%		Q29AT2              	100.00%
Bootstrap support for G3JE54 as seed ortholog is 100%.
Bootstrap support for Q29AT2 as seed ortholog is 100%.

Group of orthologs #11. Best score 1581 bits
Score difference with first non-orthologous sequence - C.militaris:1581 D.pseudoobscura:1581

G3J7V3              	100.00%		Q29BI3              	100.00%
Bootstrap support for G3J7V3 as seed ortholog is 100%.
Bootstrap support for Q29BI3 as seed ortholog is 100%.

Group of orthologs #12. Best score 1565 bits
Score difference with first non-orthologous sequence - C.militaris:1565 D.pseudoobscura:1565

G3J5J8              	100.00%		B5DYZ6              	100.00%
Bootstrap support for G3J5J8 as seed ortholog is 100%.
Bootstrap support for B5DYZ6 as seed ortholog is 100%.

Group of orthologs #13. Best score 1310 bits
Score difference with first non-orthologous sequence - C.militaris:1310 D.pseudoobscura:1310

G3J8M7              	100.00%		B5DI06              	100.00%
Bootstrap support for G3J8M7 as seed ortholog is 100%.
Bootstrap support for B5DI06 as seed ortholog is 100%.

Group of orthologs #14. Best score 1308 bits
Score difference with first non-orthologous sequence - C.militaris:1308 D.pseudoobscura:1308

G3JN95              	100.00%		Q298X6              	100.00%
Bootstrap support for G3JN95 as seed ortholog is 100%.
Bootstrap support for Q298X6 as seed ortholog is 100%.

Group of orthologs #15. Best score 1257 bits
Score difference with first non-orthologous sequence - C.militaris:851 D.pseudoobscura:765

G3JS84              	100.00%		Q292F4              	100.00%
Bootstrap support for G3JS84 as seed ortholog is 100%.
Bootstrap support for Q292F4 as seed ortholog is 100%.

Group of orthologs #16. Best score 1253 bits
Score difference with first non-orthologous sequence - C.militaris:1253 D.pseudoobscura:1253

G3JM20              	100.00%		Q28ZL4              	100.00%
G3JJA9              	12.04%		
Bootstrap support for G3JM20 as seed ortholog is 100%.
Bootstrap support for Q28ZL4 as seed ortholog is 100%.

Group of orthologs #17. Best score 1208 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:1208

G3J8E7              	100.00%		Q28XA7              	100.00%
Bootstrap support for G3J8E7 as seed ortholog is 99%.
Bootstrap support for Q28XA7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1183 bits
Score difference with first non-orthologous sequence - C.militaris:1183 D.pseudoobscura:1183

G3JEV3              	100.00%		Q28ZV6              	100.00%
Bootstrap support for G3JEV3 as seed ortholog is 100%.
Bootstrap support for Q28ZV6 as seed ortholog is 100%.

Group of orthologs #19. Best score 1141 bits
Score difference with first non-orthologous sequence - C.militaris:883 D.pseudoobscura:705

G3J7E5              	100.00%		Q290U1              	100.00%
Bootstrap support for G3J7E5 as seed ortholog is 100%.
Bootstrap support for Q290U1 as seed ortholog is 100%.

Group of orthologs #20. Best score 1129 bits
Score difference with first non-orthologous sequence - C.militaris:1129 D.pseudoobscura:1129

G3J7F8              	100.00%		Q29DX1              	100.00%
Bootstrap support for G3J7F8 as seed ortholog is 100%.
Bootstrap support for Q29DX1 as seed ortholog is 100%.

Group of orthologs #21. Best score 1106 bits
Score difference with first non-orthologous sequence - C.militaris:1029 D.pseudoobscura:968

G3JDW6              	100.00%		B5DK66              	100.00%
Bootstrap support for G3JDW6 as seed ortholog is 100%.
Bootstrap support for B5DK66 as seed ortholog is 100%.

Group of orthologs #22. Best score 1104 bits
Score difference with first non-orthologous sequence - C.militaris:1104 D.pseudoobscura:574

G3JST7              	100.00%		P22811              	100.00%
Bootstrap support for G3JST7 as seed ortholog is 100%.
Bootstrap support for P22811 as seed ortholog is 100%.

Group of orthologs #23. Best score 1066 bits
Score difference with first non-orthologous sequence - C.militaris:1066 D.pseudoobscura:943

G3JQW4              	100.00%		Q29AG5              	100.00%
Bootstrap support for G3JQW4 as seed ortholog is 100%.
Bootstrap support for Q29AG5 as seed ortholog is 100%.

Group of orthologs #24. Best score 1058 bits
Score difference with first non-orthologous sequence - C.militaris:298 D.pseudoobscura:862

G3J3K6              	100.00%		Q29NT1              	100.00%
                    	       		Q293Z1              	47.42%
Bootstrap support for G3J3K6 as seed ortholog is 100%.
Bootstrap support for Q29NT1 as seed ortholog is 100%.

Group of orthologs #25. Best score 1058 bits
Score difference with first non-orthologous sequence - C.militaris:1058 D.pseudoobscura:1058

G3J4R0              	100.00%		Q29D92              	100.00%
Bootstrap support for G3J4R0 as seed ortholog is 100%.
Bootstrap support for Q29D92 as seed ortholog is 100%.

Group of orthologs #26. Best score 1056 bits
Score difference with first non-orthologous sequence - C.militaris:1056 D.pseudoobscura:1056

G3J2U4              	100.00%		Q296N6              	100.00%
Bootstrap support for G3J2U4 as seed ortholog is 100%.
Bootstrap support for Q296N6 as seed ortholog is 100%.

Group of orthologs #27. Best score 1054 bits
Score difference with first non-orthologous sequence - C.militaris:582 D.pseudoobscura:568

G3JK37              	100.00%		Q29GN6              	100.00%
Bootstrap support for G3JK37 as seed ortholog is 100%.
Bootstrap support for Q29GN6 as seed ortholog is 100%.

Group of orthologs #28. Best score 1042 bits
Score difference with first non-orthologous sequence - C.militaris:1042 D.pseudoobscura:889

G3JPW1              	100.00%		Q29F05              	100.00%
Bootstrap support for G3JPW1 as seed ortholog is 100%.
Bootstrap support for Q29F05 as seed ortholog is 100%.

Group of orthologs #29. Best score 1040 bits
Score difference with first non-orthologous sequence - C.militaris:1040 D.pseudoobscura:1040

G3JPQ9              	100.00%		Q295C2              	100.00%
Bootstrap support for G3JPQ9 as seed ortholog is 100%.
Bootstrap support for Q295C2 as seed ortholog is 100%.

Group of orthologs #30. Best score 1016 bits
Score difference with first non-orthologous sequence - C.militaris:1016 D.pseudoobscura:885

G3J4I8              	100.00%		B5DMP8              	100.00%
Bootstrap support for G3J4I8 as seed ortholog is 100%.
Bootstrap support for B5DMP8 as seed ortholog is 100%.

Group of orthologs #31. Best score 1005 bits
Score difference with first non-orthologous sequence - C.militaris:1005 D.pseudoobscura:1005

G3J2L1              	100.00%		Q29NZ9              	100.00%
Bootstrap support for G3J2L1 as seed ortholog is 100%.
Bootstrap support for Q29NZ9 as seed ortholog is 100%.

Group of orthologs #32. Best score 1002 bits
Score difference with first non-orthologous sequence - C.militaris:1002 D.pseudoobscura:1002

G3JE91              	100.00%		Q29K53              	100.00%
Bootstrap support for G3JE91 as seed ortholog is 100%.
Bootstrap support for Q29K53 as seed ortholog is 100%.

Group of orthologs #33. Best score 974 bits
Score difference with first non-orthologous sequence - C.militaris:601 D.pseudoobscura:789

G3JLH3              	100.00%		Q292Q0              	100.00%
Bootstrap support for G3JLH3 as seed ortholog is 100%.
Bootstrap support for Q292Q0 as seed ortholog is 100%.

Group of orthologs #34. Best score 957 bits
Score difference with first non-orthologous sequence - C.militaris:294 D.pseudoobscura:98

G3JEN3              	100.00%		Q294C1              	100.00%
                    	       		B5DPL1              	34.86%
                    	       		B5DWQ0              	25.38%
Bootstrap support for G3JEN3 as seed ortholog is 100%.
Bootstrap support for Q294C1 as seed ortholog is 98%.

Group of orthologs #35. Best score 955 bits
Score difference with first non-orthologous sequence - C.militaris:543 D.pseudoobscura:955

G3JMZ1              	100.00%		Q293F0              	100.00%
Bootstrap support for G3JMZ1 as seed ortholog is 100%.
Bootstrap support for Q293F0 as seed ortholog is 100%.

Group of orthologs #36. Best score 954 bits
Score difference with first non-orthologous sequence - C.militaris:954 D.pseudoobscura:954

G3JQ74              	100.00%		Q28Y05              	100.00%
Bootstrap support for G3JQ74 as seed ortholog is 100%.
Bootstrap support for Q28Y05 as seed ortholog is 100%.

Group of orthologs #37. Best score 950 bits
Score difference with first non-orthologous sequence - C.militaris:950 D.pseudoobscura:950

G3J3J3              	100.00%		Q29DZ6              	100.00%
Bootstrap support for G3J3J3 as seed ortholog is 100%.
Bootstrap support for Q29DZ6 as seed ortholog is 100%.

Group of orthologs #38. Best score 948 bits
Score difference with first non-orthologous sequence - C.militaris:948 D.pseudoobscura:374

G3JKE8              	100.00%		Q28Z57              	100.00%
Bootstrap support for G3JKE8 as seed ortholog is 100%.
Bootstrap support for Q28Z57 as seed ortholog is 100%.

Group of orthologs #39. Best score 947 bits
Score difference with first non-orthologous sequence - C.militaris:947 D.pseudoobscura:947

G3J844              	100.00%		Q29KE6              	100.00%
Bootstrap support for G3J844 as seed ortholog is 100%.
Bootstrap support for Q29KE6 as seed ortholog is 100%.

Group of orthologs #40. Best score 934 bits
Score difference with first non-orthologous sequence - C.militaris:291 D.pseudoobscura:191

G3J504              	100.00%		B5E065              	100.00%
Bootstrap support for G3J504 as seed ortholog is 99%.
Bootstrap support for B5E065 as seed ortholog is 99%.

Group of orthologs #41. Best score 927 bits
Score difference with first non-orthologous sequence - C.militaris:927 D.pseudoobscura:927

G3JEZ4              	100.00%		B5DWC3              	100.00%
                    	       		B5DWC6              	98.49%
Bootstrap support for G3JEZ4 as seed ortholog is 100%.
Bootstrap support for B5DWC3 as seed ortholog is 100%.

Group of orthologs #42. Best score 920 bits
Score difference with first non-orthologous sequence - C.militaris:920 D.pseudoobscura:559

G3JAM8              	100.00%		Q292L1              	100.00%
                    	       		B5DI76              	10.57%
Bootstrap support for G3JAM8 as seed ortholog is 100%.
Bootstrap support for Q292L1 as seed ortholog is 100%.

Group of orthologs #43. Best score 920 bits
Score difference with first non-orthologous sequence - C.militaris:920 D.pseudoobscura:920

G3J2N7              	100.00%		Q29MC7              	100.00%
Bootstrap support for G3J2N7 as seed ortholog is 100%.
Bootstrap support for Q29MC7 as seed ortholog is 100%.

Group of orthologs #44. Best score 913 bits
Score difference with first non-orthologous sequence - C.militaris:383 D.pseudoobscura:913

G3JDM8              	100.00%		Q291D4              	100.00%
Bootstrap support for G3JDM8 as seed ortholog is 100%.
Bootstrap support for Q291D4 as seed ortholog is 100%.

Group of orthologs #45. Best score 910 bits
Score difference with first non-orthologous sequence - C.militaris:910 D.pseudoobscura:910

G3JB92              	100.00%		Q291U7              	100.00%
Bootstrap support for G3JB92 as seed ortholog is 100%.
Bootstrap support for Q291U7 as seed ortholog is 100%.

Group of orthologs #46. Best score 905 bits
Score difference with first non-orthologous sequence - C.militaris:523 D.pseudoobscura:537

G3JQP4              	100.00%		Q29JZ8              	100.00%
Bootstrap support for G3JQP4 as seed ortholog is 100%.
Bootstrap support for Q29JZ8 as seed ortholog is 100%.

Group of orthologs #47. Best score 902 bits
Score difference with first non-orthologous sequence - C.militaris:367 D.pseudoobscura:419

G3JV21              	100.00%		Q29CK8              	100.00%
Bootstrap support for G3JV21 as seed ortholog is 100%.
Bootstrap support for Q29CK8 as seed ortholog is 100%.

Group of orthologs #48. Best score 899 bits
Score difference with first non-orthologous sequence - C.militaris:899 D.pseudoobscura:899

G3JU04              	100.00%		Q29P92              	100.00%
Bootstrap support for G3JU04 as seed ortholog is 100%.
Bootstrap support for Q29P92 as seed ortholog is 100%.

Group of orthologs #49. Best score 898 bits
Score difference with first non-orthologous sequence - C.militaris:898 D.pseudoobscura:326

G3JPS7              	100.00%		Q29DU3              	100.00%
                    	       		Q29E02              	24.98%
Bootstrap support for G3JPS7 as seed ortholog is 100%.
Bootstrap support for Q29DU3 as seed ortholog is 100%.

Group of orthologs #50. Best score 896 bits
Score difference with first non-orthologous sequence - C.militaris:806 D.pseudoobscura:817

G3JIQ5              	100.00%		Q29M40              	100.00%
Bootstrap support for G3JIQ5 as seed ortholog is 100%.
Bootstrap support for Q29M40 as seed ortholog is 100%.

Group of orthologs #51. Best score 894 bits
Score difference with first non-orthologous sequence - C.militaris:894 D.pseudoobscura:270

G3JNX7              	100.00%		P04809              	100.00%
Bootstrap support for G3JNX7 as seed ortholog is 100%.
Bootstrap support for P04809 as seed ortholog is 100%.

Group of orthologs #52. Best score 888 bits
Score difference with first non-orthologous sequence - C.militaris:888 D.pseudoobscura:888

G3JGW7              	100.00%		Q29K69              	100.00%
Bootstrap support for G3JGW7 as seed ortholog is 100%.
Bootstrap support for Q29K69 as seed ortholog is 100%.

Group of orthologs #53. Best score 885 bits
Score difference with first non-orthologous sequence - C.militaris:885 D.pseudoobscura:885

G3JNR3              	100.00%		Q29GS1              	100.00%
Bootstrap support for G3JNR3 as seed ortholog is 100%.
Bootstrap support for Q29GS1 as seed ortholog is 100%.

Group of orthologs #54. Best score 881 bits
Score difference with first non-orthologous sequence - C.militaris:781 D.pseudoobscura:146

G3J9B6              	100.00%		Q292E4              	100.00%
Bootstrap support for G3J9B6 as seed ortholog is 100%.
Bootstrap support for Q292E4 as seed ortholog is 99%.

Group of orthologs #55. Best score 877 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:138

G3JHM3              	100.00%		Q29HE5              	100.00%
Bootstrap support for G3JHM3 as seed ortholog is 100%.
Bootstrap support for Q29HE5 as seed ortholog is 99%.

Group of orthologs #56. Best score 870 bits
Score difference with first non-orthologous sequence - C.militaris:870 D.pseudoobscura:870

G3JDA1              	100.00%		I5ANM9              	100.00%
Bootstrap support for G3JDA1 as seed ortholog is 100%.
Bootstrap support for I5ANM9 as seed ortholog is 100%.

Group of orthologs #57. Best score 849 bits
Score difference with first non-orthologous sequence - C.militaris:849 D.pseudoobscura:849

G3J5T6              	100.00%		Q29G21              	100.00%
Bootstrap support for G3J5T6 as seed ortholog is 100%.
Bootstrap support for Q29G21 as seed ortholog is 100%.

Group of orthologs #58. Best score 839 bits
Score difference with first non-orthologous sequence - C.militaris:839 D.pseudoobscura:839

G3JID6              	100.00%		B5DYD3              	100.00%
Bootstrap support for G3JID6 as seed ortholog is 100%.
Bootstrap support for B5DYD3 as seed ortholog is 100%.

Group of orthologs #59. Best score 831 bits
Score difference with first non-orthologous sequence - C.militaris:323 D.pseudoobscura:399

G3J2K7              	100.00%		Q292S7              	100.00%
Bootstrap support for G3J2K7 as seed ortholog is 100%.
Bootstrap support for Q292S7 as seed ortholog is 100%.

Group of orthologs #60. Best score 831 bits
Score difference with first non-orthologous sequence - C.militaris:756 D.pseudoobscura:831

G3JKH3              	100.00%		Q29F45              	100.00%
Bootstrap support for G3JKH3 as seed ortholog is 100%.
Bootstrap support for Q29F45 as seed ortholog is 100%.

Group of orthologs #61. Best score 828 bits
Score difference with first non-orthologous sequence - C.militaris:828 D.pseudoobscura:828

G3JS57              	100.00%		Q29N37              	100.00%
Bootstrap support for G3JS57 as seed ortholog is 100%.
Bootstrap support for Q29N37 as seed ortholog is 100%.

Group of orthologs #62. Best score 826 bits
Score difference with first non-orthologous sequence - C.militaris:826 D.pseudoobscura:826

G3JPS2              	100.00%		Q28Z54              	100.00%
Bootstrap support for G3JPS2 as seed ortholog is 100%.
Bootstrap support for Q28Z54 as seed ortholog is 100%.

Group of orthologs #63. Best score 814 bits
Score difference with first non-orthologous sequence - C.militaris:814 D.pseudoobscura:814

G3JM00              	100.00%		Q29LJ9              	100.00%
Bootstrap support for G3JM00 as seed ortholog is 100%.
Bootstrap support for Q29LJ9 as seed ortholog is 100%.

Group of orthologs #64. Best score 813 bits
Score difference with first non-orthologous sequence - C.militaris:813 D.pseudoobscura:571

G3J527              	100.00%		B5DRW4              	100.00%
Bootstrap support for G3J527 as seed ortholog is 100%.
Bootstrap support for B5DRW4 as seed ortholog is 46%.
Alternative seed ortholog is Q294G8 (571 bits away from this cluster)

Group of orthologs #65. Best score 809 bits
Score difference with first non-orthologous sequence - C.militaris:809 D.pseudoobscura:809

G3JMR4              	100.00%		Q292G2              	100.00%
Bootstrap support for G3JMR4 as seed ortholog is 100%.
Bootstrap support for Q292G2 as seed ortholog is 100%.

Group of orthologs #66. Best score 809 bits
Score difference with first non-orthologous sequence - C.militaris:351 D.pseudoobscura:426

G3JLY9              	100.00%		Q293N9              	100.00%
Bootstrap support for G3JLY9 as seed ortholog is 100%.
Bootstrap support for Q293N9 as seed ortholog is 100%.

Group of orthologs #67. Best score 809 bits
Score difference with first non-orthologous sequence - C.militaris:809 D.pseudoobscura:391

G3JJY0              	100.00%		Q29NZ1              	100.00%
Bootstrap support for G3JJY0 as seed ortholog is 100%.
Bootstrap support for Q29NZ1 as seed ortholog is 100%.

Group of orthologs #68. Best score 808 bits
Score difference with first non-orthologous sequence - C.militaris:338 D.pseudoobscura:278

G3JJ21              	100.00%		Q28X59              	100.00%
Bootstrap support for G3JJ21 as seed ortholog is 100%.
Bootstrap support for Q28X59 as seed ortholog is 100%.

Group of orthologs #69. Best score 806 bits
Score difference with first non-orthologous sequence - C.militaris:806 D.pseudoobscura:806

G3JKC9              	100.00%		B5DU70              	100.00%
                    	       		B5DNT0              	5.91%
Bootstrap support for G3JKC9 as seed ortholog is 100%.
Bootstrap support for B5DU70 as seed ortholog is 100%.

Group of orthologs #70. Best score 789 bits
Score difference with first non-orthologous sequence - C.militaris:789 D.pseudoobscura:789

G3J2L9              	100.00%		Q28WR6              	100.00%
Bootstrap support for G3J2L9 as seed ortholog is 100%.
Bootstrap support for Q28WR6 as seed ortholog is 100%.

Group of orthologs #71. Best score 788 bits
Score difference with first non-orthologous sequence - C.militaris:545 D.pseudoobscura:547

G3JLM5              	100.00%		Q297C3              	100.00%
Bootstrap support for G3JLM5 as seed ortholog is 100%.
Bootstrap support for Q297C3 as seed ortholog is 100%.

Group of orthologs #72. Best score 785 bits
Score difference with first non-orthologous sequence - C.militaris:387 D.pseudoobscura:785

G3JAA7              	100.00%		Q29DF2              	100.00%
                    	       		B5DWR6              	77.20%
                    	       		B5DLI0              	31.85%
Bootstrap support for G3JAA7 as seed ortholog is 100%.
Bootstrap support for Q29DF2 as seed ortholog is 100%.

Group of orthologs #73. Best score 778 bits
Score difference with first non-orthologous sequence - C.militaris:699 D.pseudoobscura:778

G3JLF5              	100.00%		Q29N74              	100.00%
Bootstrap support for G3JLF5 as seed ortholog is 100%.
Bootstrap support for Q29N74 as seed ortholog is 100%.

Group of orthologs #74. Best score 776 bits
Score difference with first non-orthologous sequence - C.militaris:776 D.pseudoobscura:776

G3JKX0              	100.00%		Q2LYV7              	100.00%
Bootstrap support for G3JKX0 as seed ortholog is 100%.
Bootstrap support for Q2LYV7 as seed ortholog is 100%.

Group of orthologs #75. Best score 771 bits
Score difference with first non-orthologous sequence - C.militaris:771 D.pseudoobscura:771

G3J9H9              	100.00%		B5DJE5              	100.00%
                    	       		Q29L63              	80.53%
                    	       		Q29L65              	33.41%
Bootstrap support for G3J9H9 as seed ortholog is 100%.
Bootstrap support for B5DJE5 as seed ortholog is 100%.

Group of orthologs #76. Best score 770 bits
Score difference with first non-orthologous sequence - C.militaris:770 D.pseudoobscura:637

G3JKV2              	100.00%		Q298Q3              	100.00%
Bootstrap support for G3JKV2 as seed ortholog is 100%.
Bootstrap support for Q298Q3 as seed ortholog is 100%.

Group of orthologs #77. Best score 767 bits
Score difference with first non-orthologous sequence - C.militaris:170 D.pseudoobscura:532

G3J9D6              	100.00%		Q28X60              	100.00%
G3J555              	8.75%		Q290X0              	11.20%
G3JRK1              	8.32%		Q29FI1              	9.33%
                    	       		B5DP27              	6.51%
Bootstrap support for G3J9D6 as seed ortholog is 99%.
Bootstrap support for Q28X60 as seed ortholog is 100%.

Group of orthologs #78. Best score 763 bits
Score difference with first non-orthologous sequence - C.militaris:395 D.pseudoobscura:86

G3JDK7              	100.00%		B5DUR1              	100.00%
G3JMJ3              	35.76%		Q29BM0              	72.00%
                    	       		Q28WU4              	51.33%
Bootstrap support for G3JDK7 as seed ortholog is 100%.
Bootstrap support for B5DUR1 as seed ortholog is 98%.

Group of orthologs #79. Best score 762 bits
Score difference with first non-orthologous sequence - C.militaris:762 D.pseudoobscura:762

G3J3J4              	100.00%		Q2M0E2              	100.00%
Bootstrap support for G3J3J4 as seed ortholog is 100%.
Bootstrap support for Q2M0E2 as seed ortholog is 100%.

Group of orthologs #80. Best score 757 bits
Score difference with first non-orthologous sequence - C.militaris:757 D.pseudoobscura:757

G3JCS6              	100.00%		Q29DQ2              	100.00%
Bootstrap support for G3JCS6 as seed ortholog is 100%.
Bootstrap support for Q29DQ2 as seed ortholog is 100%.

Group of orthologs #81. Best score 752 bits
Score difference with first non-orthologous sequence - C.militaris:539 D.pseudoobscura:603

G3J2U8              	100.00%		Q29HM9              	100.00%
Bootstrap support for G3J2U8 as seed ortholog is 100%.
Bootstrap support for Q29HM9 as seed ortholog is 100%.

Group of orthologs #82. Best score 749 bits
Score difference with first non-orthologous sequence - C.militaris:749 D.pseudoobscura:749

G3JEM0              	100.00%		Q29N38              	100.00%
Bootstrap support for G3JEM0 as seed ortholog is 100%.
Bootstrap support for Q29N38 as seed ortholog is 100%.

Group of orthologs #83. Best score 748 bits
Score difference with first non-orthologous sequence - C.militaris:748 D.pseudoobscura:748

G3JLN9              	100.00%		I5APL2              	100.00%
                    	       		Q29AH0              	54.79%
Bootstrap support for G3JLN9 as seed ortholog is 100%.
Bootstrap support for I5APL2 as seed ortholog is 100%.

Group of orthologs #84. Best score 748 bits
Score difference with first non-orthologous sequence - C.militaris:748 D.pseudoobscura:748

G3J3E0              	100.00%		Q29DK3              	100.00%
Bootstrap support for G3J3E0 as seed ortholog is 100%.
Bootstrap support for Q29DK3 as seed ortholog is 100%.

Group of orthologs #85. Best score 748 bits
Score difference with first non-orthologous sequence - C.militaris:748 D.pseudoobscura:748

G3JE01              	100.00%		Q29MI1              	100.00%
Bootstrap support for G3JE01 as seed ortholog is 100%.
Bootstrap support for Q29MI1 as seed ortholog is 100%.

Group of orthologs #86. Best score 745 bits
Score difference with first non-orthologous sequence - C.militaris:539 D.pseudoobscura:560

G3JJ39              	100.00%		Q291E9              	100.00%
Bootstrap support for G3JJ39 as seed ortholog is 100%.
Bootstrap support for Q291E9 as seed ortholog is 100%.

Group of orthologs #87. Best score 741 bits
Score difference with first non-orthologous sequence - C.militaris:741 D.pseudoobscura:741

G3JE98              	100.00%		Q29EX5              	100.00%
Bootstrap support for G3JE98 as seed ortholog is 100%.
Bootstrap support for Q29EX5 as seed ortholog is 100%.

Group of orthologs #88. Best score 736 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:104

G3JI79              	100.00%		Q294S5              	100.00%
Bootstrap support for G3JI79 as seed ortholog is 98%.
Bootstrap support for Q294S5 as seed ortholog is 99%.

Group of orthologs #89. Best score 732 bits
Score difference with first non-orthologous sequence - C.militaris:732 D.pseudoobscura:137

G3JG10              	100.00%		Q28WQ1              	100.00%
Bootstrap support for G3JG10 as seed ortholog is 100%.
Bootstrap support for Q28WQ1 as seed ortholog is 99%.

Group of orthologs #90. Best score 731 bits
Score difference with first non-orthologous sequence - C.militaris:731 D.pseudoobscura:731

G3JRL0              	100.00%		Q299C3              	100.00%
Bootstrap support for G3JRL0 as seed ortholog is 100%.
Bootstrap support for Q299C3 as seed ortholog is 100%.

Group of orthologs #91. Best score 730 bits
Score difference with first non-orthologous sequence - C.militaris:730 D.pseudoobscura:730

G3J372              	100.00%		B5DKF4              	100.00%
Bootstrap support for G3J372 as seed ortholog is 100%.
Bootstrap support for B5DKF4 as seed ortholog is 100%.

Group of orthologs #92. Best score 728 bits
Score difference with first non-orthologous sequence - C.militaris:728 D.pseudoobscura:521

G3JPU0              	100.00%		B5E1L9              	100.00%
Bootstrap support for G3JPU0 as seed ortholog is 100%.
Bootstrap support for B5E1L9 as seed ortholog is 100%.

Group of orthologs #93. Best score 728 bits
Score difference with first non-orthologous sequence - C.militaris:509 D.pseudoobscura:428

G3JIB2              	100.00%		Q29N77              	100.00%
Bootstrap support for G3JIB2 as seed ortholog is 100%.
Bootstrap support for Q29N77 as seed ortholog is 100%.

Group of orthologs #94. Best score 727 bits
Score difference with first non-orthologous sequence - C.militaris:727 D.pseudoobscura:603

G3J650              	100.00%		Q297R9              	100.00%
                    	       		Q28XB6              	63.11%
Bootstrap support for G3J650 as seed ortholog is 100%.
Bootstrap support for Q297R9 as seed ortholog is 100%.

Group of orthologs #95. Best score 727 bits
Score difference with first non-orthologous sequence - C.militaris:727 D.pseudoobscura:727

G3J3Q4              	100.00%		Q28XX1              	100.00%
Bootstrap support for G3J3Q4 as seed ortholog is 100%.
Bootstrap support for Q28XX1 as seed ortholog is 100%.

Group of orthologs #96. Best score 722 bits
Score difference with first non-orthologous sequence - C.militaris:354 D.pseudoobscura:567

G3JJH4              	100.00%		Q2M0Q6              	100.00%
Bootstrap support for G3JJH4 as seed ortholog is 100%.
Bootstrap support for Q2M0Q6 as seed ortholog is 100%.

Group of orthologs #97. Best score 720 bits
Score difference with first non-orthologous sequence - C.militaris:720 D.pseudoobscura:720

G3JI71              	100.00%		B5DLK9              	100.00%
Bootstrap support for G3JI71 as seed ortholog is 100%.
Bootstrap support for B5DLK9 as seed ortholog is 100%.

Group of orthologs #98. Best score 716 bits
Score difference with first non-orthologous sequence - C.militaris:716 D.pseudoobscura:296

G3JD91              	100.00%		Q28YI2              	100.00%
Bootstrap support for G3JD91 as seed ortholog is 100%.
Bootstrap support for Q28YI2 as seed ortholog is 100%.

Group of orthologs #99. Best score 707 bits
Score difference with first non-orthologous sequence - C.militaris:707 D.pseudoobscura:61

G3JPS3              	100.00%		Q29CL2              	100.00%
Bootstrap support for G3JPS3 as seed ortholog is 100%.
Bootstrap support for Q29CL2 as seed ortholog is 96%.

Group of orthologs #100. Best score 703 bits
Score difference with first non-orthologous sequence - C.militaris:703 D.pseudoobscura:703

G3J9Q2              	100.00%		Q29H62              	100.00%
Bootstrap support for G3J9Q2 as seed ortholog is 100%.
Bootstrap support for Q29H62 as seed ortholog is 100%.

Group of orthologs #101. Best score 703 bits
Score difference with first non-orthologous sequence - C.militaris:703 D.pseudoobscura:703

G3J984              	100.00%		Q29IV9              	100.00%
Bootstrap support for G3J984 as seed ortholog is 100%.
Bootstrap support for Q29IV9 as seed ortholog is 100%.

Group of orthologs #102. Best score 700 bits
Score difference with first non-orthologous sequence - C.militaris:700 D.pseudoobscura:700

G3JF19              	100.00%		Q29HW0              	100.00%
Bootstrap support for G3JF19 as seed ortholog is 100%.
Bootstrap support for Q29HW0 as seed ortholog is 100%.

Group of orthologs #103. Best score 699 bits
Score difference with first non-orthologous sequence - C.militaris:699 D.pseudoobscura:699

G3JG85              	100.00%		Q296I4              	100.00%
Bootstrap support for G3JG85 as seed ortholog is 100%.
Bootstrap support for Q296I4 as seed ortholog is 100%.

Group of orthologs #104. Best score 698 bits
Score difference with first non-orthologous sequence - C.militaris:698 D.pseudoobscura:592

G3JI77              	100.00%		Q29BS3              	100.00%
Bootstrap support for G3JI77 as seed ortholog is 100%.
Bootstrap support for Q29BS3 as seed ortholog is 100%.

Group of orthologs #105. Best score 696 bits
Score difference with first non-orthologous sequence - C.militaris:696 D.pseudoobscura:179

G3JGJ7              	100.00%		Q29H46              	100.00%
G3JJB9              	41.38%		B5DZR8              	100.00%
                    	       		Q297Q8              	75.76%
                    	       		B5E159              	72.73%
                    	       		B5DVZ6              	71.21%
                    	       		Q29DN0              	62.12%
Bootstrap support for G3JGJ7 as seed ortholog is 100%.
Bootstrap support for Q29H46 as seed ortholog is 100%.
Bootstrap support for B5DZR8 as seed ortholog is 100%.

Group of orthologs #106. Best score 696 bits
Score difference with first non-orthologous sequence - C.militaris:696 D.pseudoobscura:612

G3JHM0              	100.00%		Q293E0              	100.00%
Bootstrap support for G3JHM0 as seed ortholog is 100%.
Bootstrap support for Q293E0 as seed ortholog is 100%.

Group of orthologs #107. Best score 695 bits
Score difference with first non-orthologous sequence - C.militaris:589 D.pseudoobscura:695

G3JKY5              	100.00%		Q29EI2              	100.00%
Bootstrap support for G3JKY5 as seed ortholog is 100%.
Bootstrap support for Q29EI2 as seed ortholog is 100%.

Group of orthologs #108. Best score 694 bits
Score difference with first non-orthologous sequence - C.militaris:73 D.pseudoobscura:694

G3J460              	100.00%		Q29H04              	100.00%
Bootstrap support for G3J460 as seed ortholog is 95%.
Bootstrap support for Q29H04 as seed ortholog is 100%.

Group of orthologs #109. Best score 686 bits
Score difference with first non-orthologous sequence - C.militaris:686 D.pseudoobscura:597

G3JJ70              	100.00%		Q291N3              	100.00%
Bootstrap support for G3JJ70 as seed ortholog is 100%.
Bootstrap support for Q291N3 as seed ortholog is 100%.

Group of orthologs #110. Best score 683 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:73

G3JQT5              	100.00%		Q294S9              	100.00%
G3JIW0              	18.96%		B5DJ61              	56.00%
                    	       		B5DW27              	54.97%
                    	       		Q29N89              	48.17%
                    	       		Q29NR3              	46.16%
                    	       		B5DXT3              	19.99%
                    	       		Q291V5              	17.93%
                    	       		Q297E7              	17.72%
                    	       		B5DXT4              	15.56%
Bootstrap support for G3JQT5 as seed ortholog is 90%.
Bootstrap support for Q294S9 as seed ortholog is 84%.

Group of orthologs #111. Best score 680 bits
Score difference with first non-orthologous sequence - C.militaris:680 D.pseudoobscura:680

G3JHP0              	100.00%		Q29G56              	100.00%
Bootstrap support for G3JHP0 as seed ortholog is 100%.
Bootstrap support for Q29G56 as seed ortholog is 100%.

Group of orthologs #112. Best score 679 bits
Score difference with first non-orthologous sequence - C.militaris:679 D.pseudoobscura:679

G3JFW3              	100.00%		Q29FR7              	100.00%
Bootstrap support for G3JFW3 as seed ortholog is 100%.
Bootstrap support for Q29FR7 as seed ortholog is 100%.

Group of orthologs #113. Best score 678 bits
Score difference with first non-orthologous sequence - C.militaris:678 D.pseudoobscura:547

G3JCP4              	100.00%		Q29GC2              	100.00%
Bootstrap support for G3JCP4 as seed ortholog is 100%.
Bootstrap support for Q29GC2 as seed ortholog is 100%.

Group of orthologs #114. Best score 676 bits
Score difference with first non-orthologous sequence - C.militaris:676 D.pseudoobscura:280

G3J3M4              	100.00%		Q29PN6              	100.00%
Bootstrap support for G3J3M4 as seed ortholog is 100%.
Bootstrap support for Q29PN6 as seed ortholog is 100%.

Group of orthologs #115. Best score 665 bits
Score difference with first non-orthologous sequence - C.militaris:665 D.pseudoobscura:665

G3JTQ3              	100.00%		Q297K0              	100.00%
Bootstrap support for G3JTQ3 as seed ortholog is 100%.
Bootstrap support for Q297K0 as seed ortholog is 100%.

Group of orthologs #116. Best score 662 bits
Score difference with first non-orthologous sequence - C.militaris:662 D.pseudoobscura:253

G3J2I7              	100.00%		Q28YJ6              	100.00%
Bootstrap support for G3J2I7 as seed ortholog is 100%.
Bootstrap support for Q28YJ6 as seed ortholog is 99%.

Group of orthologs #117. Best score 658 bits
Score difference with first non-orthologous sequence - C.militaris:658 D.pseudoobscura:658

G3JKA1              	100.00%		Q29A03              	100.00%
Bootstrap support for G3JKA1 as seed ortholog is 100%.
Bootstrap support for Q29A03 as seed ortholog is 100%.

Group of orthologs #118. Best score 657 bits
Score difference with first non-orthologous sequence - C.militaris:657 D.pseudoobscura:284

G3JFV6              	100.00%		B5DL96              	100.00%
                    	       		B5DJP5              	57.31%
Bootstrap support for G3JFV6 as seed ortholog is 100%.
Bootstrap support for B5DL96 as seed ortholog is 100%.

Group of orthologs #119. Best score 656 bits
Score difference with first non-orthologous sequence - C.militaris:656 D.pseudoobscura:656

G3JAD3              	100.00%		Q292Y6              	100.00%
Bootstrap support for G3JAD3 as seed ortholog is 100%.
Bootstrap support for Q292Y6 as seed ortholog is 100%.

Group of orthologs #120. Best score 655 bits
Score difference with first non-orthologous sequence - C.militaris:655 D.pseudoobscura:168

G3J955              	100.00%		Q2LYL2              	100.00%
Bootstrap support for G3J955 as seed ortholog is 100%.
Bootstrap support for Q2LYL2 as seed ortholog is 99%.

Group of orthologs #121. Best score 650 bits
Score difference with first non-orthologous sequence - C.militaris:650 D.pseudoobscura:650

G3JNP4              	100.00%		B5DPP2              	100.00%
Bootstrap support for G3JNP4 as seed ortholog is 100%.
Bootstrap support for B5DPP2 as seed ortholog is 100%.

Group of orthologs #122. Best score 650 bits
Score difference with first non-orthologous sequence - C.militaris:650 D.pseudoobscura:650

G3JJA1              	100.00%		I5APZ7              	100.00%
Bootstrap support for G3JJA1 as seed ortholog is 100%.
Bootstrap support for I5APZ7 as seed ortholog is 100%.

Group of orthologs #123. Best score 645 bits
Score difference with first non-orthologous sequence - C.militaris:645 D.pseudoobscura:582

G3J6W4              	100.00%		Q298V2              	100.00%
Bootstrap support for G3J6W4 as seed ortholog is 100%.
Bootstrap support for Q298V2 as seed ortholog is 100%.

Group of orthologs #124. Best score 644 bits
Score difference with first non-orthologous sequence - C.militaris:644 D.pseudoobscura:644

G3JG75              	100.00%		Q28ZD4              	100.00%
Bootstrap support for G3JG75 as seed ortholog is 100%.
Bootstrap support for Q28ZD4 as seed ortholog is 100%.

Group of orthologs #125. Best score 640 bits
Score difference with first non-orthologous sequence - C.militaris:640 D.pseudoobscura:640

G3JBE2              	100.00%		Q2M0V2              	100.00%
Bootstrap support for G3JBE2 as seed ortholog is 100%.
Bootstrap support for Q2M0V2 as seed ortholog is 100%.

Group of orthologs #126. Best score 639 bits
Score difference with first non-orthologous sequence - C.militaris:639 D.pseudoobscura:584

G3JTK3              	100.00%		Q28XK7              	100.00%
Bootstrap support for G3JTK3 as seed ortholog is 100%.
Bootstrap support for Q28XK7 as seed ortholog is 100%.

Group of orthologs #127. Best score 638 bits
Score difference with first non-orthologous sequence - C.militaris:345 D.pseudoobscura:638

G3JLY4              	100.00%		Q29JE9              	100.00%
Bootstrap support for G3JLY4 as seed ortholog is 100%.
Bootstrap support for Q29JE9 as seed ortholog is 100%.

Group of orthologs #128. Best score 638 bits
Score difference with first non-orthologous sequence - C.militaris:638 D.pseudoobscura:638

G3JRH4              	100.00%		Q29PN1              	100.00%
Bootstrap support for G3JRH4 as seed ortholog is 100%.
Bootstrap support for Q29PN1 as seed ortholog is 100%.

Group of orthologs #129. Best score 637 bits
Score difference with first non-orthologous sequence - C.militaris:637 D.pseudoobscura:520

G3J3Y9              	100.00%		Q29JI9              	100.00%
Bootstrap support for G3J3Y9 as seed ortholog is 100%.
Bootstrap support for Q29JI9 as seed ortholog is 100%.

Group of orthologs #130. Best score 636 bits
Score difference with first non-orthologous sequence - C.militaris:325 D.pseudoobscura:636

G3J453              	100.00%		Q29M08              	100.00%
G3J9C4              	11.59%		Q29M07              	51.57%
G3JPF3              	9.30%		B5DVP9              	24.70%
G3J535              	6.14%		
G3J5K4              	5.50%		
G3JT71              	5.06%		
Bootstrap support for G3J453 as seed ortholog is 100%.
Bootstrap support for Q29M08 as seed ortholog is 100%.

Group of orthologs #131. Best score 634 bits
Score difference with first non-orthologous sequence - C.militaris:434 D.pseudoobscura:427

G3JQH2              	100.00%		B5DX15              	100.00%
G3JE86              	34.10%		Q29HM8              	100.00%
                    	       		B5DV58              	17.54%
Bootstrap support for G3JQH2 as seed ortholog is 100%.
Bootstrap support for B5DX15 as seed ortholog is 100%.
Bootstrap support for Q29HM8 as seed ortholog is 100%.

Group of orthologs #132. Best score 633 bits
Score difference with first non-orthologous sequence - C.militaris:633 D.pseudoobscura:552

G3J4C2              	100.00%		Q294I9              	100.00%
Bootstrap support for G3J4C2 as seed ortholog is 100%.
Bootstrap support for Q294I9 as seed ortholog is 100%.

Group of orthologs #133. Best score 633 bits
Score difference with first non-orthologous sequence - C.militaris:633 D.pseudoobscura:494

G3JLY6              	100.00%		Q298N1              	100.00%
Bootstrap support for G3JLY6 as seed ortholog is 100%.
Bootstrap support for Q298N1 as seed ortholog is 100%.

Group of orthologs #134. Best score 632 bits
Score difference with first non-orthologous sequence - C.militaris:632 D.pseudoobscura:632

G3J3N0              	100.00%		Q295Y5              	100.00%
Bootstrap support for G3J3N0 as seed ortholog is 100%.
Bootstrap support for Q295Y5 as seed ortholog is 100%.

Group of orthologs #135. Best score 631 bits
Score difference with first non-orthologous sequence - C.militaris:631 D.pseudoobscura:631

G3J627              	100.00%		Q29AE5              	100.00%
Bootstrap support for G3J627 as seed ortholog is 100%.
Bootstrap support for Q29AE5 as seed ortholog is 100%.

Group of orthologs #136. Best score 630 bits
Score difference with first non-orthologous sequence - C.militaris:630 D.pseudoobscura:228

G3JPT6              	100.00%		Q28WL2              	100.00%
Bootstrap support for G3JPT6 as seed ortholog is 100%.
Bootstrap support for Q28WL2 as seed ortholog is 100%.

Group of orthologs #137. Best score 628 bits
Score difference with first non-orthologous sequence - C.militaris:216 D.pseudoobscura:158

G3JKH4              	100.00%		Q29KH0              	100.00%
Bootstrap support for G3JKH4 as seed ortholog is 99%.
Bootstrap support for Q29KH0 as seed ortholog is 97%.

Group of orthologs #138. Best score 624 bits
Score difference with first non-orthologous sequence - C.militaris:624 D.pseudoobscura:624

G3JPV5              	100.00%		Q29JY3              	100.00%
Bootstrap support for G3JPV5 as seed ortholog is 100%.
Bootstrap support for Q29JY3 as seed ortholog is 100%.

Group of orthologs #139. Best score 623 bits
Score difference with first non-orthologous sequence - C.militaris:623 D.pseudoobscura:491

G3JKH6              	100.00%		Q29D32              	100.00%
Bootstrap support for G3JKH6 as seed ortholog is 100%.
Bootstrap support for Q29D32 as seed ortholog is 100%.

Group of orthologs #140. Best score 623 bits
Score difference with first non-orthologous sequence - C.militaris:623 D.pseudoobscura:623

G3JL79              	100.00%		Q29FS9              	100.00%
Bootstrap support for G3JL79 as seed ortholog is 100%.
Bootstrap support for Q29FS9 as seed ortholog is 100%.

Group of orthologs #141. Best score 623 bits
Score difference with first non-orthologous sequence - C.militaris:623 D.pseudoobscura:202

G3JMA0              	100.00%		Q29G51              	100.00%
Bootstrap support for G3JMA0 as seed ortholog is 100%.
Bootstrap support for Q29G51 as seed ortholog is 100%.

Group of orthologs #142. Best score 621 bits
Score difference with first non-orthologous sequence - C.militaris:621 D.pseudoobscura:543

G3JL39              	100.00%		Q29GX0              	100.00%
Bootstrap support for G3JL39 as seed ortholog is 100%.
Bootstrap support for Q29GX0 as seed ortholog is 100%.

Group of orthologs #143. Best score 619 bits
Score difference with first non-orthologous sequence - C.militaris:246 D.pseudoobscura:213

G3J935              	100.00%		B5DWF0              	100.00%
Bootstrap support for G3J935 as seed ortholog is 99%.
Bootstrap support for B5DWF0 as seed ortholog is 99%.

Group of orthologs #144. Best score 617 bits
Score difference with first non-orthologous sequence - C.militaris:384 D.pseudoobscura:421

G3JP92              	100.00%		Q298G7              	100.00%
Bootstrap support for G3JP92 as seed ortholog is 100%.
Bootstrap support for Q298G7 as seed ortholog is 100%.

Group of orthologs #145. Best score 616 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:616

G3JK92              	100.00%		B5DLH5              	100.00%
Bootstrap support for G3JK92 as seed ortholog is 99%.
Bootstrap support for B5DLH5 as seed ortholog is 100%.

Group of orthologs #146. Best score 616 bits
Score difference with first non-orthologous sequence - C.militaris:616 D.pseudoobscura:616

G3JU02              	100.00%		Q28Y79              	100.00%
Bootstrap support for G3JU02 as seed ortholog is 100%.
Bootstrap support for Q28Y79 as seed ortholog is 100%.

Group of orthologs #147. Best score 615 bits
Score difference with first non-orthologous sequence - C.militaris:615 D.pseudoobscura:615

G3J7J7              	100.00%		B5DIC7              	100.00%
Bootstrap support for G3J7J7 as seed ortholog is 100%.
Bootstrap support for B5DIC7 as seed ortholog is 100%.

Group of orthologs #148. Best score 615 bits
Score difference with first non-orthologous sequence - C.militaris:615 D.pseudoobscura:94

G3J8Q7              	100.00%		B5DTD6              	100.00%
Bootstrap support for G3J8Q7 as seed ortholog is 100%.
Bootstrap support for B5DTD6 as seed ortholog is 99%.

Group of orthologs #149. Best score 615 bits
Score difference with first non-orthologous sequence - C.militaris:615 D.pseudoobscura:475

G3JJH0              	100.00%		Q28YI1              	100.00%
Bootstrap support for G3JJH0 as seed ortholog is 100%.
Bootstrap support for Q28YI1 as seed ortholog is 100%.

Group of orthologs #150. Best score 615 bits
Score difference with first non-orthologous sequence - C.militaris:615 D.pseudoobscura:615

G3JUU8              	100.00%		Q29PD8              	100.00%
Bootstrap support for G3JUU8 as seed ortholog is 100%.
Bootstrap support for Q29PD8 as seed ortholog is 100%.

Group of orthologs #151. Best score 614 bits
Score difference with first non-orthologous sequence - C.militaris:614 D.pseudoobscura:210

G3JE16              	100.00%		Q28YB0              	100.00%
Bootstrap support for G3JE16 as seed ortholog is 100%.
Bootstrap support for Q28YB0 as seed ortholog is 99%.

Group of orthologs #152. Best score 614 bits
Score difference with first non-orthologous sequence - C.militaris:357 D.pseudoobscura:614

G3J6C9              	100.00%		Q29G05              	100.00%
Bootstrap support for G3J6C9 as seed ortholog is 100%.
Bootstrap support for Q29G05 as seed ortholog is 100%.

Group of orthologs #153. Best score 613 bits
Score difference with first non-orthologous sequence - C.militaris:613 D.pseudoobscura:532

G3J464              	100.00%		B5DLU0              	100.00%
                    	       		B5DWX8              	81.29%
Bootstrap support for G3J464 as seed ortholog is 100%.
Bootstrap support for B5DLU0 as seed ortholog is 100%.

Group of orthologs #154. Best score 613 bits
Score difference with first non-orthologous sequence - C.militaris:613 D.pseudoobscura:613

G3JAC2              	100.00%		Q28ZE7              	100.00%
Bootstrap support for G3JAC2 as seed ortholog is 100%.
Bootstrap support for Q28ZE7 as seed ortholog is 100%.

Group of orthologs #155. Best score 613 bits
Score difference with first non-orthologous sequence - C.militaris:613 D.pseudoobscura:613

G3JPR2              	100.00%		Q295K1              	100.00%
Bootstrap support for G3JPR2 as seed ortholog is 100%.
Bootstrap support for Q295K1 as seed ortholog is 100%.

Group of orthologs #156. Best score 611 bits
Score difference with first non-orthologous sequence - C.militaris:611 D.pseudoobscura:611

G3JL24              	100.00%		Q29IN8              	100.00%
Bootstrap support for G3JL24 as seed ortholog is 100%.
Bootstrap support for Q29IN8 as seed ortholog is 100%.

Group of orthologs #157. Best score 610 bits
Score difference with first non-orthologous sequence - C.militaris:610 D.pseudoobscura:553

G3JJF6              	100.00%		Q29L81              	100.00%
Bootstrap support for G3JJF6 as seed ortholog is 100%.
Bootstrap support for Q29L81 as seed ortholog is 100%.

Group of orthologs #158. Best score 609 bits
Score difference with first non-orthologous sequence - C.militaris:404 D.pseudoobscura:339

G3J3R8              	100.00%		Q29KH2              	100.00%
Bootstrap support for G3J3R8 as seed ortholog is 100%.
Bootstrap support for Q29KH2 as seed ortholog is 100%.

Group of orthologs #159. Best score 608 bits
Score difference with first non-orthologous sequence - C.militaris:608 D.pseudoobscura:608

G3J3J6              	100.00%		Q296D7              	100.00%
Bootstrap support for G3J3J6 as seed ortholog is 100%.
Bootstrap support for Q296D7 as seed ortholog is 100%.

Group of orthologs #160. Best score 608 bits
Score difference with first non-orthologous sequence - C.militaris:343 D.pseudoobscura:313

G3JKE7              	100.00%		Q29MP0              	100.00%
Bootstrap support for G3JKE7 as seed ortholog is 100%.
Bootstrap support for Q29MP0 as seed ortholog is 100%.

Group of orthologs #161. Best score 607 bits
Score difference with first non-orthologous sequence - C.militaris:325 D.pseudoobscura:25

G3JUA9              	100.00%		Q297X4              	100.00%
                    	       		B5DQY0              	8.72%
Bootstrap support for G3JUA9 as seed ortholog is 100%.
Bootstrap support for Q297X4 as seed ortholog is 52%.
Alternative seed ortholog is Q29J98 (25 bits away from this cluster)

Group of orthologs #162. Best score 607 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:607

G3JN30              	100.00%		Q29KX9              	100.00%
Bootstrap support for G3JN30 as seed ortholog is 94%.
Bootstrap support for Q29KX9 as seed ortholog is 100%.

Group of orthologs #163. Best score 601 bits
Score difference with first non-orthologous sequence - C.militaris:601 D.pseudoobscura:225

G3JEL2              	100.00%		Q299L9              	100.00%
                    	       		Q29MX4              	47.12%
                    	       		Q299M5              	46.85%
                    	       		I5ANG6              	33.52%
Bootstrap support for G3JEL2 as seed ortholog is 100%.
Bootstrap support for Q299L9 as seed ortholog is 99%.

Group of orthologs #164. Best score 601 bits
Score difference with first non-orthologous sequence - C.militaris:469 D.pseudoobscura:517

G3JSC5              	100.00%		Q2LYQ0              	100.00%
Bootstrap support for G3JSC5 as seed ortholog is 100%.
Bootstrap support for Q2LYQ0 as seed ortholog is 100%.

Group of orthologs #165. Best score 597 bits
Score difference with first non-orthologous sequence - C.militaris:597 D.pseudoobscura:537

G3J5U4              	100.00%		Q299D0              	100.00%
Bootstrap support for G3J5U4 as seed ortholog is 100%.
Bootstrap support for Q299D0 as seed ortholog is 100%.

Group of orthologs #166. Best score 596 bits
Score difference with first non-orthologous sequence - C.militaris:596 D.pseudoobscura:596

G3JPV0              	100.00%		B5DX59              	100.00%
Bootstrap support for G3JPV0 as seed ortholog is 100%.
Bootstrap support for B5DX59 as seed ortholog is 100%.

Group of orthologs #167. Best score 594 bits
Score difference with first non-orthologous sequence - C.militaris:594 D.pseudoobscura:455

G3J8D1              	100.00%		Q29I61              	100.00%
                    	       		B5DXM1              	56.06%
Bootstrap support for G3J8D1 as seed ortholog is 100%.
Bootstrap support for Q29I61 as seed ortholog is 100%.

Group of orthologs #168. Best score 594 bits
Score difference with first non-orthologous sequence - C.militaris:594 D.pseudoobscura:594

G3JDB9              	100.00%		B5DN54              	100.00%
Bootstrap support for G3JDB9 as seed ortholog is 100%.
Bootstrap support for B5DN54 as seed ortholog is 100%.

Group of orthologs #169. Best score 594 bits
Score difference with first non-orthologous sequence - C.militaris:594 D.pseudoobscura:411

G3JA68              	100.00%		Q295J6              	100.00%
Bootstrap support for G3JA68 as seed ortholog is 100%.
Bootstrap support for Q295J6 as seed ortholog is 100%.

Group of orthologs #170. Best score 594 bits
Score difference with first non-orthologous sequence - C.militaris:594 D.pseudoobscura:594

G3JHB6              	100.00%		Q290F7              	100.00%
Bootstrap support for G3JHB6 as seed ortholog is 100%.
Bootstrap support for Q290F7 as seed ortholog is 100%.

Group of orthologs #171. Best score 590 bits
Score difference with first non-orthologous sequence - C.militaris:373 D.pseudoobscura:331

G3JUT3              	100.00%		B5DW65              	100.00%
Bootstrap support for G3JUT3 as seed ortholog is 100%.
Bootstrap support for B5DW65 as seed ortholog is 100%.

Group of orthologs #172. Best score 589 bits
Score difference with first non-orthologous sequence - C.militaris:320 D.pseudoobscura:476

G3JGQ0              	100.00%		B5DRY0              	100.00%
G3JP87              	24.19%		
G3JIK0              	14.58%		
Bootstrap support for G3JGQ0 as seed ortholog is 100%.
Bootstrap support for B5DRY0 as seed ortholog is 100%.

Group of orthologs #173. Best score 589 bits
Score difference with first non-orthologous sequence - C.militaris:315 D.pseudoobscura:589

G3JDB2              	100.00%		Q298K8              	100.00%
Bootstrap support for G3JDB2 as seed ortholog is 100%.
Bootstrap support for Q298K8 as seed ortholog is 100%.

Group of orthologs #174. Best score 588 bits
Score difference with first non-orthologous sequence - C.militaris:588 D.pseudoobscura:588

G3JAR3              	100.00%		B5DKG3              	100.00%
                    	       		Q29JI7              	36.92%
                    	       		B5DPI9              	30.51%
Bootstrap support for G3JAR3 as seed ortholog is 100%.
Bootstrap support for B5DKG3 as seed ortholog is 100%.

Group of orthologs #175. Best score 588 bits
Score difference with first non-orthologous sequence - C.militaris:588 D.pseudoobscura:588

G3JKP2              	100.00%		Q29FI4              	100.00%
Bootstrap support for G3JKP2 as seed ortholog is 100%.
Bootstrap support for Q29FI4 as seed ortholog is 100%.

Group of orthologs #176. Best score 588 bits
Score difference with first non-orthologous sequence - C.militaris:398 D.pseudoobscura:400

G3JJU9              	100.00%		Q29HB2              	100.00%
Bootstrap support for G3JJU9 as seed ortholog is 100%.
Bootstrap support for Q29HB2 as seed ortholog is 100%.

Group of orthologs #177. Best score 586 bits
Score difference with first non-orthologous sequence - C.militaris:213 D.pseudoobscura:586

G3J2R4              	100.00%		Q292Q9              	100.00%
Bootstrap support for G3J2R4 as seed ortholog is 99%.
Bootstrap support for Q292Q9 as seed ortholog is 100%.

Group of orthologs #178. Best score 586 bits
Score difference with first non-orthologous sequence - C.militaris:586 D.pseudoobscura:586

G3JQM1              	100.00%		B5DZ83              	100.00%
Bootstrap support for G3JQM1 as seed ortholog is 100%.
Bootstrap support for B5DZ83 as seed ortholog is 100%.

Group of orthologs #179. Best score 585 bits
Score difference with first non-orthologous sequence - C.militaris:205 D.pseudoobscura:113

G3JI14              	100.00%		B5DRP7              	100.00%
Bootstrap support for G3JI14 as seed ortholog is 100%.
Bootstrap support for B5DRP7 as seed ortholog is 99%.

Group of orthologs #180. Best score 585 bits
Score difference with first non-orthologous sequence - C.militaris:585 D.pseudoobscura:585

G3JNN2              	100.00%		Q29L91              	100.00%
Bootstrap support for G3JNN2 as seed ortholog is 100%.
Bootstrap support for Q29L91 as seed ortholog is 100%.

Group of orthologs #181. Best score 584 bits
Score difference with first non-orthologous sequence - C.militaris:584 D.pseudoobscura:584

G3JQ49              	100.00%		Q29K74              	100.00%
Bootstrap support for G3JQ49 as seed ortholog is 100%.
Bootstrap support for Q29K74 as seed ortholog is 100%.

Group of orthologs #182. Best score 583 bits
Score difference with first non-orthologous sequence - C.militaris:583 D.pseudoobscura:174

G3JI87              	100.00%		Q29EW2              	100.00%
                    	       		B5DIK4              	9.31%
Bootstrap support for G3JI87 as seed ortholog is 100%.
Bootstrap support for Q29EW2 as seed ortholog is 99%.

Group of orthologs #183. Best score 583 bits
Score difference with first non-orthologous sequence - C.militaris:583 D.pseudoobscura:583

G3JR69              	100.00%		Q290L0              	100.00%
Bootstrap support for G3JR69 as seed ortholog is 100%.
Bootstrap support for Q290L0 as seed ortholog is 100%.

Group of orthologs #184. Best score 582 bits
Score difference with first non-orthologous sequence - C.militaris:418 D.pseudoobscura:499

G3JD88              	100.00%		B5DS03              	100.00%
Bootstrap support for G3JD88 as seed ortholog is 100%.
Bootstrap support for B5DS03 as seed ortholog is 100%.

Group of orthologs #185. Best score 582 bits
Score difference with first non-orthologous sequence - C.militaris:72 D.pseudoobscura:140

G3J6K8              	100.00%		Q29FE8              	100.00%
Bootstrap support for G3J6K8 as seed ortholog is 88%.
Bootstrap support for Q29FE8 as seed ortholog is 99%.

Group of orthologs #186. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:577 D.pseudoobscura:577

G3JPQ1              	100.00%		B5DHZ5              	100.00%
Bootstrap support for G3JPQ1 as seed ortholog is 100%.
Bootstrap support for B5DHZ5 as seed ortholog is 100%.

Group of orthologs #187. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:329 D.pseudoobscura:176

G3JDK6              	100.00%		Q29DF9              	100.00%
Bootstrap support for G3JDK6 as seed ortholog is 100%.
Bootstrap support for Q29DF9 as seed ortholog is 99%.

Group of orthologs #188. Best score 577 bits
Score difference with first non-orthologous sequence - C.militaris:577 D.pseudoobscura:243

G3JFU1              	100.00%		Q29DI0              	100.00%
Bootstrap support for G3JFU1 as seed ortholog is 100%.
Bootstrap support for Q29DI0 as seed ortholog is 100%.

Group of orthologs #189. Best score 576 bits
Score difference with first non-orthologous sequence - C.militaris:576 D.pseudoobscura:576

G3J398              	100.00%		B5DH51              	100.00%
Bootstrap support for G3J398 as seed ortholog is 100%.
Bootstrap support for B5DH51 as seed ortholog is 100%.

Group of orthologs #190. Best score 574 bits
Score difference with first non-orthologous sequence - C.militaris:574 D.pseudoobscura:574

G3JEF2              	100.00%		Q28ZG8              	100.00%
Bootstrap support for G3JEF2 as seed ortholog is 100%.
Bootstrap support for Q28ZG8 as seed ortholog is 100%.

Group of orthologs #191. Best score 573 bits
Score difference with first non-orthologous sequence - C.militaris:573 D.pseudoobscura:573

G3JHE0              	100.00%		P16340              	100.00%
Bootstrap support for G3JHE0 as seed ortholog is 100%.
Bootstrap support for P16340 as seed ortholog is 100%.

Group of orthologs #192. Best score 573 bits
Score difference with first non-orthologous sequence - C.militaris:334 D.pseudoobscura:351

G3J4Y8              	100.00%		Q29PM0              	100.00%
Bootstrap support for G3J4Y8 as seed ortholog is 100%.
Bootstrap support for Q29PM0 as seed ortholog is 100%.

Group of orthologs #193. Best score 571 bits
Score difference with first non-orthologous sequence - C.militaris:571 D.pseudoobscura:571

G3JAU4              	100.00%		Q2M196              	100.00%
G3JGP3              	24.10%		
Bootstrap support for G3JAU4 as seed ortholog is 100%.
Bootstrap support for Q2M196 as seed ortholog is 100%.

Group of orthologs #194. Best score 570 bits
Score difference with first non-orthologous sequence - C.militaris:570 D.pseudoobscura:235

G3JB30              	100.00%		Q2LYJ1              	100.00%
Bootstrap support for G3JB30 as seed ortholog is 100%.
Bootstrap support for Q2LYJ1 as seed ortholog is 99%.

Group of orthologs #195. Best score 569 bits
Score difference with first non-orthologous sequence - C.militaris:569 D.pseudoobscura:39

G3JP31              	100.00%		B5DX90              	100.00%
Bootstrap support for G3JP31 as seed ortholog is 100%.
Bootstrap support for B5DX90 as seed ortholog is 89%.

Group of orthologs #196. Best score 566 bits
Score difference with first non-orthologous sequence - C.militaris:356 D.pseudoobscura:345

G3J4L2              	100.00%		Q29KG7              	100.00%
                    	       		Q29K32              	51.72%
Bootstrap support for G3J4L2 as seed ortholog is 100%.
Bootstrap support for Q29KG7 as seed ortholog is 100%.

Group of orthologs #197. Best score 566 bits
Score difference with first non-orthologous sequence - C.militaris:566 D.pseudoobscura:566

G3JLN8              	100.00%		Q29HL5              	100.00%
                    	       		Q2M0Z3              	34.27%
Bootstrap support for G3JLN8 as seed ortholog is 100%.
Bootstrap support for Q29HL5 as seed ortholog is 100%.

Group of orthologs #198. Best score 565 bits
Score difference with first non-orthologous sequence - C.militaris:100 D.pseudoobscura:120

G3JSD1              	100.00%		Q29IJ0              	100.00%
Bootstrap support for G3JSD1 as seed ortholog is 99%.
Bootstrap support for Q29IJ0 as seed ortholog is 99%.

Group of orthologs #199. Best score 563 bits
Score difference with first non-orthologous sequence - C.militaris:563 D.pseudoobscura:563

G3J4G5              	100.00%		Q29KC0              	100.00%
Bootstrap support for G3J4G5 as seed ortholog is 100%.
Bootstrap support for Q29KC0 as seed ortholog is 100%.

Group of orthologs #200. Best score 563 bits
Score difference with first non-orthologous sequence - C.militaris:563 D.pseudoobscura:563

G3JJM0              	100.00%		Q29IQ0              	100.00%
Bootstrap support for G3JJM0 as seed ortholog is 100%.
Bootstrap support for Q29IQ0 as seed ortholog is 100%.

Group of orthologs #201. Best score 562 bits
Score difference with first non-orthologous sequence - C.militaris:562 D.pseudoobscura:562

G3JGA3              	100.00%		Q28Z03              	100.00%
Bootstrap support for G3JGA3 as seed ortholog is 100%.
Bootstrap support for Q28Z03 as seed ortholog is 100%.

Group of orthologs #202. Best score 562 bits
Score difference with first non-orthologous sequence - C.militaris:170 D.pseudoobscura:70

G3J7K8              	100.00%		Q29EB4              	100.00%
Bootstrap support for G3J7K8 as seed ortholog is 99%.
Bootstrap support for Q29EB4 as seed ortholog is 95%.

Group of orthologs #203. Best score 558 bits
Score difference with first non-orthologous sequence - C.militaris:194 D.pseudoobscura:201

G3JE75              	100.00%		B5DIG8              	100.00%
Bootstrap support for G3JE75 as seed ortholog is 100%.
Bootstrap support for B5DIG8 as seed ortholog is 100%.

Group of orthologs #204. Best score 557 bits
Score difference with first non-orthologous sequence - C.militaris:557 D.pseudoobscura:557

G3JPQ0              	100.00%		Q298I1              	100.00%
Bootstrap support for G3JPQ0 as seed ortholog is 100%.
Bootstrap support for Q298I1 as seed ortholog is 100%.

Group of orthologs #205. Best score 555 bits
Score difference with first non-orthologous sequence - C.militaris:555 D.pseudoobscura:555

G3J3Q8              	100.00%		Q292D9              	100.00%
Bootstrap support for G3J3Q8 as seed ortholog is 100%.
Bootstrap support for Q292D9 as seed ortholog is 100%.

Group of orthologs #206. Best score 554 bits
Score difference with first non-orthologous sequence - C.militaris:297 D.pseudoobscura:46

G3J7H1              	100.00%		B5DWV1              	100.00%
                    	       		Q29B27              	47.62%
                    	       		B5DMS4              	29.37%
Bootstrap support for G3J7H1 as seed ortholog is 100%.
Bootstrap support for B5DWV1 as seed ortholog is 97%.

Group of orthologs #207. Best score 551 bits
Score difference with first non-orthologous sequence - C.militaris:376 D.pseudoobscura:383

G3J973              	100.00%		Q29NU1              	100.00%
Bootstrap support for G3J973 as seed ortholog is 100%.
Bootstrap support for Q29NU1 as seed ortholog is 100%.

Group of orthologs #208. Best score 547 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:231

G3J8V6              	100.00%		Q29JL1              	100.00%
Bootstrap support for G3J8V6 as seed ortholog is 99%.
Bootstrap support for Q29JL1 as seed ortholog is 99%.

Group of orthologs #209. Best score 545 bits
Score difference with first non-orthologous sequence - C.militaris:545 D.pseudoobscura:419

G3J9F0              	100.00%		Q297H0              	100.00%
Bootstrap support for G3J9F0 as seed ortholog is 100%.
Bootstrap support for Q297H0 as seed ortholog is 100%.

Group of orthologs #210. Best score 542 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:542

G3JHN0              	100.00%		Q298R2              	100.00%
Bootstrap support for G3JHN0 as seed ortholog is 99%.
Bootstrap support for Q298R2 as seed ortholog is 100%.

Group of orthologs #211. Best score 542 bits
Score difference with first non-orthologous sequence - C.militaris:542 D.pseudoobscura:542

G3JN58              	100.00%		Q29LQ4              	100.00%
Bootstrap support for G3JN58 as seed ortholog is 100%.
Bootstrap support for Q29LQ4 as seed ortholog is 100%.

Group of orthologs #212. Best score 542 bits
Score difference with first non-orthologous sequence - C.militaris:542 D.pseudoobscura:542

G3JRS2              	100.00%		Q2LYM2              	100.00%
Bootstrap support for G3JRS2 as seed ortholog is 100%.
Bootstrap support for Q2LYM2 as seed ortholog is 100%.

Group of orthologs #213. Best score 541 bits
Score difference with first non-orthologous sequence - C.militaris:541 D.pseudoobscura:541

G3J8A4              	100.00%		Q29CG0              	100.00%
Bootstrap support for G3J8A4 as seed ortholog is 100%.
Bootstrap support for Q29CG0 as seed ortholog is 100%.

Group of orthologs #214. Best score 539 bits
Score difference with first non-orthologous sequence - C.militaris:539 D.pseudoobscura:539

G3JGU1              	100.00%		Q29IU3              	100.00%
                    	       		Q299G9              	43.93%
Bootstrap support for G3JGU1 as seed ortholog is 100%.
Bootstrap support for Q29IU3 as seed ortholog is 100%.

Group of orthologs #215. Best score 539 bits
Score difference with first non-orthologous sequence - C.militaris:31 D.pseudoobscura:342

G3JD34              	100.00%		Q2M106              	100.00%
Bootstrap support for G3JD34 as seed ortholog is 73%.
Alternative seed ortholog is G3J2R3 (31 bits away from this cluster)
Bootstrap support for Q2M106 as seed ortholog is 100%.

Group of orthologs #216. Best score 536 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:105

G3JHW4              	100.00%		B5DH76              	100.00%
                    	       		Q29PH4              	74.47%
Bootstrap support for G3JHW4 as seed ortholog is 96%.
Bootstrap support for B5DH76 as seed ortholog is 99%.

Group of orthologs #217. Best score 536 bits
Score difference with first non-orthologous sequence - C.militaris:536 D.pseudoobscura:536

G3JRC5              	100.00%		B5DKI8              	100.00%
                    	       		Q298B1              	79.41%
Bootstrap support for G3JRC5 as seed ortholog is 100%.
Bootstrap support for B5DKI8 as seed ortholog is 100%.

Group of orthologs #218. Best score 535 bits
Score difference with first non-orthologous sequence - C.militaris:535 D.pseudoobscura:535

G3J6C1              	100.00%		Q292H1              	100.00%
Bootstrap support for G3J6C1 as seed ortholog is 100%.
Bootstrap support for Q292H1 as seed ortholog is 100%.

Group of orthologs #219. Best score 533 bits
Score difference with first non-orthologous sequence - C.militaris:533 D.pseudoobscura:239

G3JV32              	100.00%		Q29HM7              	100.00%
                    	       		B5DI54              	30.00%
Bootstrap support for G3JV32 as seed ortholog is 100%.
Bootstrap support for Q29HM7 as seed ortholog is 100%.

Group of orthologs #220. Best score 532 bits
Score difference with first non-orthologous sequence - C.militaris:532 D.pseudoobscura:532

G3J905              	100.00%		Q29NR2              	100.00%
Bootstrap support for G3J905 as seed ortholog is 100%.
Bootstrap support for Q29NR2 as seed ortholog is 100%.

Group of orthologs #221. Best score 530 bits
Score difference with first non-orthologous sequence - C.militaris:200 D.pseudoobscura:241

G3JBR7              	100.00%		I5ANS5              	100.00%
G3J9U4              	11.24%		B5DLK6              	53.42%
Bootstrap support for G3JBR7 as seed ortholog is 99%.
Bootstrap support for I5ANS5 as seed ortholog is 99%.

Group of orthologs #222. Best score 529 bits
Score difference with first non-orthologous sequence - C.militaris:529 D.pseudoobscura:529

G3J9K2              	100.00%		Q28Y76              	100.00%
Bootstrap support for G3J9K2 as seed ortholog is 100%.
Bootstrap support for Q28Y76 as seed ortholog is 100%.

Group of orthologs #223. Best score 529 bits
Score difference with first non-orthologous sequence - C.militaris:529 D.pseudoobscura:529

G3J3U0              	100.00%		Q2LZ16              	100.00%
Bootstrap support for G3J3U0 as seed ortholog is 100%.
Bootstrap support for Q2LZ16 as seed ortholog is 100%.

Group of orthologs #224. Best score 525 bits
Score difference with first non-orthologous sequence - C.militaris:525 D.pseudoobscura:525

G3J5U5              	100.00%		Q28XF0              	100.00%
Bootstrap support for G3J5U5 as seed ortholog is 100%.
Bootstrap support for Q28XF0 as seed ortholog is 100%.

Group of orthologs #225. Best score 524 bits
Score difference with first non-orthologous sequence - C.militaris:524 D.pseudoobscura:524

G3J8S2              	100.00%		Q29EN2              	100.00%
Bootstrap support for G3J8S2 as seed ortholog is 100%.
Bootstrap support for Q29EN2 as seed ortholog is 100%.

Group of orthologs #226. Best score 523 bits
Score difference with first non-orthologous sequence - C.militaris:523 D.pseudoobscura:29

G3J355              	100.00%		Q28Z37              	100.00%
Bootstrap support for G3J355 as seed ortholog is 100%.
Bootstrap support for Q28Z37 as seed ortholog is 75%.

Group of orthologs #227. Best score 522 bits
Score difference with first non-orthologous sequence - C.militaris:282 D.pseudoobscura:154

G3JLY8              	100.00%		Q29IA7              	100.00%
Bootstrap support for G3JLY8 as seed ortholog is 100%.
Bootstrap support for Q29IA7 as seed ortholog is 99%.

Group of orthologs #228. Best score 519 bits
Score difference with first non-orthologous sequence - C.militaris:519 D.pseudoobscura:519

G3J934              	100.00%		B5DMS2              	100.00%
Bootstrap support for G3J934 as seed ortholog is 100%.
Bootstrap support for B5DMS2 as seed ortholog is 100%.

Group of orthologs #229. Best score 519 bits
Score difference with first non-orthologous sequence - C.militaris:519 D.pseudoobscura:519

G3JIR9              	100.00%		Q29FC0              	100.00%
Bootstrap support for G3JIR9 as seed ortholog is 100%.
Bootstrap support for Q29FC0 as seed ortholog is 100%.

Group of orthologs #230. Best score 518 bits
Score difference with first non-orthologous sequence - C.militaris:518 D.pseudoobscura:518

G3JE83              	100.00%		Q29FG9              	100.00%
Bootstrap support for G3JE83 as seed ortholog is 100%.
Bootstrap support for Q29FG9 as seed ortholog is 100%.

Group of orthologs #231. Best score 518 bits
Score difference with first non-orthologous sequence - C.militaris:518 D.pseudoobscura:518

G3JSB5              	100.00%		Q293X5              	100.00%
Bootstrap support for G3JSB5 as seed ortholog is 100%.
Bootstrap support for Q293X5 as seed ortholog is 100%.

Group of orthologs #232. Best score 517 bits
Score difference with first non-orthologous sequence - C.militaris:517 D.pseudoobscura:517

G3J7G7              	100.00%		Q295G5              	100.00%
Bootstrap support for G3J7G7 as seed ortholog is 100%.
Bootstrap support for Q295G5 as seed ortholog is 100%.

Group of orthologs #233. Best score 517 bits
Score difference with first non-orthologous sequence - C.militaris:517 D.pseudoobscura:517

G3JTK0              	100.00%		Q29HL8              	100.00%
Bootstrap support for G3JTK0 as seed ortholog is 100%.
Bootstrap support for Q29HL8 as seed ortholog is 100%.

Group of orthologs #234. Best score 514 bits
Score difference with first non-orthologous sequence - C.militaris:514 D.pseudoobscura:514

G3JPA4              	100.00%		B5DH42              	100.00%
Bootstrap support for G3JPA4 as seed ortholog is 100%.
Bootstrap support for B5DH42 as seed ortholog is 100%.

Group of orthologs #235. Best score 513 bits
Score difference with first non-orthologous sequence - C.militaris:513 D.pseudoobscura:338

G3J3M1              	100.00%		Q29GK5              	100.00%
Bootstrap support for G3J3M1 as seed ortholog is 100%.
Bootstrap support for Q29GK5 as seed ortholog is 99%.

Group of orthologs #236. Best score 512 bits
Score difference with first non-orthologous sequence - C.militaris:512 D.pseudoobscura:512

G3JFT1              	100.00%		Q2M197              	100.00%
Bootstrap support for G3JFT1 as seed ortholog is 100%.
Bootstrap support for Q2M197 as seed ortholog is 100%.

Group of orthologs #237. Best score 509 bits
Score difference with first non-orthologous sequence - C.militaris:509 D.pseudoobscura:278

G3JKA3              	100.00%		Q293G5              	100.00%
Bootstrap support for G3JKA3 as seed ortholog is 100%.
Bootstrap support for Q293G5 as seed ortholog is 100%.

Group of orthologs #238. Best score 508 bits
Score difference with first non-orthologous sequence - C.militaris:227 D.pseudoobscura:249

G3JR18              	100.00%		Q29NS3              	100.00%
Bootstrap support for G3JR18 as seed ortholog is 100%.
Bootstrap support for Q29NS3 as seed ortholog is 100%.

Group of orthologs #239. Best score 507 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:182

G3J6C3              	100.00%		Q29LW7              	100.00%
Bootstrap support for G3J6C3 as seed ortholog is 95%.
Bootstrap support for Q29LW7 as seed ortholog is 99%.

Group of orthologs #240. Best score 506 bits
Score difference with first non-orthologous sequence - C.militaris:506 D.pseudoobscura:506

G3J4E2              	100.00%		Q29H49              	100.00%
G3J605              	9.59%		
Bootstrap support for G3J4E2 as seed ortholog is 100%.
Bootstrap support for Q29H49 as seed ortholog is 100%.

Group of orthologs #241. Best score 504 bits
Score difference with first non-orthologous sequence - C.militaris:504 D.pseudoobscura:504

G3JKM5              	100.00%		Q29E99              	100.00%
Bootstrap support for G3JKM5 as seed ortholog is 100%.
Bootstrap support for Q29E99 as seed ortholog is 100%.

Group of orthologs #242. Best score 503 bits
Score difference with first non-orthologous sequence - C.militaris:503 D.pseudoobscura:503

G3JG01              	100.00%		Q299D2              	100.00%
Bootstrap support for G3JG01 as seed ortholog is 100%.
Bootstrap support for Q299D2 as seed ortholog is 100%.

Group of orthologs #243. Best score 502 bits
Score difference with first non-orthologous sequence - C.militaris:502 D.pseudoobscura:502

G3J4L5              	100.00%		Q29HF0              	100.00%
Bootstrap support for G3J4L5 as seed ortholog is 100%.
Bootstrap support for Q29HF0 as seed ortholog is 100%.

Group of orthologs #244. Best score 502 bits
Score difference with first non-orthologous sequence - C.militaris:502 D.pseudoobscura:502

G3JQ98              	100.00%		Q28XF3              	100.00%
Bootstrap support for G3JQ98 as seed ortholog is 100%.
Bootstrap support for Q28XF3 as seed ortholog is 100%.

Group of orthologs #245. Best score 500 bits
Score difference with first non-orthologous sequence - C.militaris:500 D.pseudoobscura:500

G3JD41              	100.00%		B5DKS8              	100.00%
Bootstrap support for G3JD41 as seed ortholog is 100%.
Bootstrap support for B5DKS8 as seed ortholog is 100%.

Group of orthologs #246. Best score 499 bits
Score difference with first non-orthologous sequence - C.militaris:499 D.pseudoobscura:374

G3JGA7              	100.00%		Q290N0              	100.00%
Bootstrap support for G3JGA7 as seed ortholog is 100%.
Bootstrap support for Q290N0 as seed ortholog is 100%.

Group of orthologs #247. Best score 499 bits
Score difference with first non-orthologous sequence - C.militaris:14 D.pseudoobscura:499

G3J446              	100.00%		Q2LYV1              	100.00%
Bootstrap support for G3J446 as seed ortholog is 61%.
Alternative seed ortholog is G3JTL3 (14 bits away from this cluster)
Bootstrap support for Q2LYV1 as seed ortholog is 100%.

Group of orthologs #248. Best score 498 bits
Score difference with first non-orthologous sequence - C.militaris:498 D.pseudoobscura:387

G3JF41              	100.00%		B5DI84              	100.00%
                    	       		B5DI85              	58.40%
                    	       		B5DTJ9              	48.37%
Bootstrap support for G3JF41 as seed ortholog is 100%.
Bootstrap support for B5DI84 as seed ortholog is 100%.

Group of orthologs #249. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:497 D.pseudoobscura:497

G3JF38              	100.00%		Q28Y86              	100.00%
Bootstrap support for G3JF38 as seed ortholog is 100%.
Bootstrap support for Q28Y86 as seed ortholog is 100%.

Group of orthologs #250. Best score 497 bits
Score difference with first non-orthologous sequence - C.militaris:497 D.pseudoobscura:497

G3JT79              	100.00%		Q29KW9              	100.00%
Bootstrap support for G3JT79 as seed ortholog is 100%.
Bootstrap support for Q29KW9 as seed ortholog is 100%.

Group of orthologs #251. Best score 494 bits
Score difference with first non-orthologous sequence - C.militaris:494 D.pseudoobscura:494

G3JC69              	100.00%		Q29CJ5              	100.00%
Bootstrap support for G3JC69 as seed ortholog is 100%.
Bootstrap support for Q29CJ5 as seed ortholog is 100%.

Group of orthologs #252. Best score 494 bits
Score difference with first non-orthologous sequence - C.militaris:494 D.pseudoobscura:494

G3JN84              	100.00%		Q29AJ7              	100.00%
Bootstrap support for G3JN84 as seed ortholog is 100%.
Bootstrap support for Q29AJ7 as seed ortholog is 100%.

Group of orthologs #253. Best score 493 bits
Score difference with first non-orthologous sequence - C.militaris:493 D.pseudoobscura:493

G3J7G2              	100.00%		Q28ZV5              	100.00%
Bootstrap support for G3J7G2 as seed ortholog is 100%.
Bootstrap support for Q28ZV5 as seed ortholog is 100%.

Group of orthologs #254. Best score 493 bits
Score difference with first non-orthologous sequence - C.militaris:493 D.pseudoobscura:493

G3J993              	100.00%		Q29G09              	100.00%
Bootstrap support for G3J993 as seed ortholog is 100%.
Bootstrap support for Q29G09 as seed ortholog is 100%.

Group of orthologs #255. Best score 492 bits
Score difference with first non-orthologous sequence - C.militaris:316 D.pseudoobscura:222

G3JQ83              	100.00%		Q29JE3              	100.00%
Bootstrap support for G3JQ83 as seed ortholog is 100%.
Bootstrap support for Q29JE3 as seed ortholog is 99%.

Group of orthologs #256. Best score 491 bits
Score difference with first non-orthologous sequence - C.militaris:491 D.pseudoobscura:226

G3JEL3              	100.00%		Q299N6              	100.00%
Bootstrap support for G3JEL3 as seed ortholog is 100%.
Bootstrap support for Q299N6 as seed ortholog is 99%.

Group of orthologs #257. Best score 490 bits
Score difference with first non-orthologous sequence - C.militaris:490 D.pseudoobscura:218

G3JHA8              	100.00%		B5DWN6              	100.00%
Bootstrap support for G3JHA8 as seed ortholog is 100%.
Bootstrap support for B5DWN6 as seed ortholog is 99%.

Group of orthologs #258. Best score 489 bits
Score difference with first non-orthologous sequence - C.militaris:489 D.pseudoobscura:489

G3JIK5              	100.00%		B5DYU6              	100.00%
Bootstrap support for G3JIK5 as seed ortholog is 100%.
Bootstrap support for B5DYU6 as seed ortholog is 100%.

Group of orthologs #259. Best score 488 bits
Score difference with first non-orthologous sequence - C.militaris:488 D.pseudoobscura:488

G3J8G8              	100.00%		Q296K3              	100.00%
Bootstrap support for G3J8G8 as seed ortholog is 100%.
Bootstrap support for Q296K3 as seed ortholog is 100%.

Group of orthologs #260. Best score 487 bits
Score difference with first non-orthologous sequence - C.militaris:487 D.pseudoobscura:487

G3JH88              	100.00%		Q291J5              	100.00%
Bootstrap support for G3JH88 as seed ortholog is 100%.
Bootstrap support for Q291J5 as seed ortholog is 100%.

Group of orthologs #261. Best score 487 bits
Score difference with first non-orthologous sequence - C.militaris:487 D.pseudoobscura:487

G3JJI7              	100.00%		Q29F72              	100.00%
Bootstrap support for G3JJI7 as seed ortholog is 100%.
Bootstrap support for Q29F72 as seed ortholog is 100%.

Group of orthologs #262. Best score 487 bits
Score difference with first non-orthologous sequence - C.militaris:406 D.pseudoobscura:385

G3JN48              	100.00%		Q29HL9              	100.00%
Bootstrap support for G3JN48 as seed ortholog is 100%.
Bootstrap support for Q29HL9 as seed ortholog is 100%.

Group of orthologs #263. Best score 486 bits
Score difference with first non-orthologous sequence - C.militaris:486 D.pseudoobscura:486

G3J3V4              	100.00%		B5DZI1              	100.00%
Bootstrap support for G3J3V4 as seed ortholog is 100%.
Bootstrap support for B5DZI1 as seed ortholog is 100%.

Group of orthologs #264. Best score 486 bits
Score difference with first non-orthologous sequence - C.militaris:486 D.pseudoobscura:486

G3J5S8              	100.00%		Q29IV7              	100.00%
Bootstrap support for G3J5S8 as seed ortholog is 100%.
Bootstrap support for Q29IV7 as seed ortholog is 100%.

Group of orthologs #265. Best score 486 bits
Score difference with first non-orthologous sequence - C.militaris:486 D.pseudoobscura:259

G3J9Y9              	100.00%		Q29FE3              	100.00%
Bootstrap support for G3J9Y9 as seed ortholog is 100%.
Bootstrap support for Q29FE3 as seed ortholog is 100%.

Group of orthologs #266. Best score 486 bits
Score difference with first non-orthologous sequence - C.militaris:359 D.pseudoobscura:486

G3JT06              	100.00%		Q294A1              	100.00%
Bootstrap support for G3JT06 as seed ortholog is 100%.
Bootstrap support for Q294A1 as seed ortholog is 100%.

Group of orthologs #267. Best score 485 bits
Score difference with first non-orthologous sequence - C.militaris:339 D.pseudoobscura:362

G3JDQ5              	100.00%		B5DSA2              	100.00%
Bootstrap support for G3JDQ5 as seed ortholog is 100%.
Bootstrap support for B5DSA2 as seed ortholog is 100%.

Group of orthologs #268. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:483 D.pseudoobscura:483

G3J4R7              	100.00%		Q29MU9              	100.00%
Bootstrap support for G3J4R7 as seed ortholog is 100%.
Bootstrap support for Q29MU9 as seed ortholog is 100%.

Group of orthologs #269. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:395 D.pseudoobscura:483

G3JP42              	100.00%		Q293H1              	100.00%
Bootstrap support for G3JP42 as seed ortholog is 100%.
Bootstrap support for Q293H1 as seed ortholog is 100%.

Group of orthologs #270. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:483 D.pseudoobscura:483

G3JG78              	100.00%		Q29LW8              	100.00%
Bootstrap support for G3JG78 as seed ortholog is 100%.
Bootstrap support for Q29LW8 as seed ortholog is 100%.

Group of orthologs #271. Best score 483 bits
Score difference with first non-orthologous sequence - C.militaris:354 D.pseudoobscura:362

G3JLA7              	100.00%		Q2M042              	100.00%
Bootstrap support for G3JLA7 as seed ortholog is 100%.
Bootstrap support for Q2M042 as seed ortholog is 100%.

Group of orthologs #272. Best score 482 bits
Score difference with first non-orthologous sequence - C.militaris:482 D.pseudoobscura:482

G3JKB7              	100.00%		Q29GF4              	100.00%
Bootstrap support for G3JKB7 as seed ortholog is 100%.
Bootstrap support for Q29GF4 as seed ortholog is 100%.

Group of orthologs #273. Best score 481 bits
Score difference with first non-orthologous sequence - C.militaris:481 D.pseudoobscura:150

G3JPD5              	100.00%		Q290E9              	100.00%
Bootstrap support for G3JPD5 as seed ortholog is 100%.
Bootstrap support for Q290E9 as seed ortholog is 99%.

Group of orthologs #274. Best score 479 bits
Score difference with first non-orthologous sequence - C.militaris:383 D.pseudoobscura:479

G3JDN8              	100.00%		Q292K5              	100.00%
Bootstrap support for G3JDN8 as seed ortholog is 100%.
Bootstrap support for Q292K5 as seed ortholog is 100%.

Group of orthologs #275. Best score 479 bits
Score difference with first non-orthologous sequence - C.militaris:479 D.pseudoobscura:152

G3JLI9              	100.00%		Q29HY8              	100.00%
Bootstrap support for G3JLI9 as seed ortholog is 100%.
Bootstrap support for Q29HY8 as seed ortholog is 99%.

Group of orthologs #276. Best score 477 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:184

G3JJL2              	100.00%		Q296G7              	100.00%
G3J7H6              	20.55%		
Bootstrap support for G3JJL2 as seed ortholog is 96%.
Bootstrap support for Q296G7 as seed ortholog is 99%.

Group of orthologs #277. Best score 476 bits
Score difference with first non-orthologous sequence - C.militaris:476 D.pseudoobscura:294

G3JSJ1              	100.00%		Q291L4              	100.00%
Bootstrap support for G3JSJ1 as seed ortholog is 100%.
Bootstrap support for Q291L4 as seed ortholog is 100%.

Group of orthologs #278. Best score 476 bits
Score difference with first non-orthologous sequence - C.militaris:476 D.pseudoobscura:300

G3JPY6              	100.00%		Q29LN4              	100.00%
Bootstrap support for G3JPY6 as seed ortholog is 100%.
Bootstrap support for Q29LN4 as seed ortholog is 100%.

Group of orthologs #279. Best score 475 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:475

G3JAP4              	100.00%		Q298Q8              	100.00%
Bootstrap support for G3JAP4 as seed ortholog is 99%.
Bootstrap support for Q298Q8 as seed ortholog is 100%.

Group of orthologs #280. Best score 474 bits
Score difference with first non-orthologous sequence - C.militaris:474 D.pseudoobscura:474

G3J3C6              	100.00%		Q291S8              	100.00%
Bootstrap support for G3J3C6 as seed ortholog is 100%.
Bootstrap support for Q291S8 as seed ortholog is 100%.

Group of orthologs #281. Best score 473 bits
Score difference with first non-orthologous sequence - C.militaris:473 D.pseudoobscura:58

G3JFU3              	100.00%		O44104              	100.00%
Bootstrap support for G3JFU3 as seed ortholog is 100%.
Bootstrap support for O44104 as seed ortholog is 97%.

Group of orthologs #282. Best score 472 bits
Score difference with first non-orthologous sequence - C.militaris:472 D.pseudoobscura:108

G3JKK3              	100.00%		Q29HF5              	100.00%
Bootstrap support for G3JKK3 as seed ortholog is 100%.
Bootstrap support for Q29HF5 as seed ortholog is 95%.

Group of orthologs #283. Best score 470 bits
Score difference with first non-orthologous sequence - C.militaris:470 D.pseudoobscura:341

G3JD46              	100.00%		Q2M109              	100.00%
Bootstrap support for G3JD46 as seed ortholog is 100%.
Bootstrap support for Q2M109 as seed ortholog is 100%.

Group of orthologs #284. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:469 D.pseudoobscura:469

G3JH47              	100.00%		Q28YK7              	100.00%
Bootstrap support for G3JH47 as seed ortholog is 100%.
Bootstrap support for Q28YK7 as seed ortholog is 100%.

Group of orthologs #285. Best score 469 bits
Score difference with first non-orthologous sequence - C.militaris:370 D.pseudoobscura:469

G3JKL5              	100.00%		Q29C41              	100.00%
Bootstrap support for G3JKL5 as seed ortholog is 100%.
Bootstrap support for Q29C41 as seed ortholog is 100%.

Group of orthologs #286. Best score 468 bits
Score difference with first non-orthologous sequence - C.militaris:296 D.pseudoobscura:110

G3JHU5              	100.00%		I5APA0              	100.00%
Bootstrap support for G3JHU5 as seed ortholog is 100%.
Bootstrap support for I5APA0 as seed ortholog is 99%.

Group of orthologs #287. Best score 466 bits
Score difference with first non-orthologous sequence - C.militaris:466 D.pseudoobscura:466

G3J2Z5              	100.00%		Q29GU5              	100.00%
Bootstrap support for G3J2Z5 as seed ortholog is 100%.
Bootstrap support for Q29GU5 as seed ortholog is 100%.

Group of orthologs #288. Best score 466 bits
Score difference with first non-orthologous sequence - C.militaris:147 D.pseudoobscura:35

G3JAA9              	100.00%		Q29CD4              	100.00%
Bootstrap support for G3JAA9 as seed ortholog is 99%.
Bootstrap support for Q29CD4 as seed ortholog is 82%.

Group of orthologs #289. Best score 466 bits
Score difference with first non-orthologous sequence - C.militaris:466 D.pseudoobscura:115

G3JUV4              	100.00%		Q299V2              	100.00%
Bootstrap support for G3JUV4 as seed ortholog is 100%.
Bootstrap support for Q299V2 as seed ortholog is 99%.

Group of orthologs #290. Best score 465 bits
Score difference with first non-orthologous sequence - C.militaris:465 D.pseudoobscura:57

G3J4Q2              	100.00%		Q28ZS9              	100.00%
Bootstrap support for G3J4Q2 as seed ortholog is 100%.
Bootstrap support for Q28ZS9 as seed ortholog is 94%.

Group of orthologs #291. Best score 465 bits
Score difference with first non-orthologous sequence - C.militaris:465 D.pseudoobscura:167

G3J8F1              	100.00%		Q29P77              	100.00%
Bootstrap support for G3J8F1 as seed ortholog is 100%.
Bootstrap support for Q29P77 as seed ortholog is 97%.

Group of orthologs #292. Best score 463 bits
Score difference with first non-orthologous sequence - C.militaris:463 D.pseudoobscura:463

G3JFC7              	100.00%		B5E0S4              	100.00%
Bootstrap support for G3JFC7 as seed ortholog is 100%.
Bootstrap support for B5E0S4 as seed ortholog is 100%.

Group of orthologs #293. Best score 463 bits
Score difference with first non-orthologous sequence - C.militaris:232 D.pseudoobscura:463

G3JIN8              	100.00%		Q2M1A6              	100.00%
Bootstrap support for G3JIN8 as seed ortholog is 99%.
Bootstrap support for Q2M1A6 as seed ortholog is 100%.

Group of orthologs #294. Best score 461 bits
Score difference with first non-orthologous sequence - C.militaris:380 D.pseudoobscura:335

G3JEF1              	100.00%		Q29PI0              	100.00%
Bootstrap support for G3JEF1 as seed ortholog is 100%.
Bootstrap support for Q29PI0 as seed ortholog is 100%.

Group of orthologs #295. Best score 460 bits
Score difference with first non-orthologous sequence - C.militaris:460 D.pseudoobscura:460

G3JMT9              	100.00%		Q29FQ4              	100.00%
Bootstrap support for G3JMT9 as seed ortholog is 100%.
Bootstrap support for Q29FQ4 as seed ortholog is 100%.

Group of orthologs #296. Best score 459 bits
Score difference with first non-orthologous sequence - C.militaris:368 D.pseudoobscura:377

G3JC12              	100.00%		Q297C4              	100.00%
Bootstrap support for G3JC12 as seed ortholog is 100%.
Bootstrap support for Q297C4 as seed ortholog is 100%.

Group of orthologs #297. Best score 459 bits
Score difference with first non-orthologous sequence - C.militaris:459 D.pseudoobscura:459

G3JJV7              	100.00%		Q28X89              	100.00%
Bootstrap support for G3JJV7 as seed ortholog is 100%.
Bootstrap support for Q28X89 as seed ortholog is 100%.

Group of orthologs #298. Best score 459 bits
Score difference with first non-orthologous sequence - C.militaris:359 D.pseudoobscura:309

G3J4N6              	100.00%		Q29PD4              	100.00%
Bootstrap support for G3J4N6 as seed ortholog is 100%.
Bootstrap support for Q29PD4 as seed ortholog is 100%.

Group of orthologs #299. Best score 458 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:196

G3JE33              	100.00%		Q29IH5              	100.00%
                    	       		B5DIB4              	33.33%
Bootstrap support for G3JE33 as seed ortholog is 99%.
Bootstrap support for Q29IH5 as seed ortholog is 99%.

Group of orthologs #300. Best score 458 bits
Score difference with first non-orthologous sequence - C.militaris:258 D.pseudoobscura:305

G3JMI1              	100.00%		Q29DE7              	100.00%
Bootstrap support for G3JMI1 as seed ortholog is 100%.
Bootstrap support for Q29DE7 as seed ortholog is 100%.

Group of orthologs #301. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 D.pseudoobscura:251

G3JQ52              	100.00%		Q28ZW7              	100.00%
Bootstrap support for G3JQ52 as seed ortholog is 100%.
Bootstrap support for Q28ZW7 as seed ortholog is 99%.

Group of orthologs #302. Best score 456 bits
Score difference with first non-orthologous sequence - C.militaris:456 D.pseudoobscura:456

G3JJ96              	100.00%		Q29HD7              	100.00%
Bootstrap support for G3JJ96 as seed ortholog is 100%.
Bootstrap support for Q29HD7 as seed ortholog is 100%.

Group of orthologs #303. Best score 455 bits
Score difference with first non-orthologous sequence - C.militaris:455 D.pseudoobscura:455

G3J4P7              	100.00%		B5DIC2              	100.00%
Bootstrap support for G3J4P7 as seed ortholog is 100%.
Bootstrap support for B5DIC2 as seed ortholog is 100%.

Group of orthologs #304. Best score 454 bits
Score difference with first non-orthologous sequence - C.militaris:454 D.pseudoobscura:257

G3JCX7              	100.00%		B5DYB4              	100.00%
Bootstrap support for G3JCX7 as seed ortholog is 100%.
Bootstrap support for B5DYB4 as seed ortholog is 100%.

Group of orthologs #305. Best score 454 bits
Score difference with first non-orthologous sequence - C.militaris:454 D.pseudoobscura:454

G3J6J9              	100.00%		Q29F37              	100.00%
Bootstrap support for G3J6J9 as seed ortholog is 100%.
Bootstrap support for Q29F37 as seed ortholog is 100%.

Group of orthologs #306. Best score 452 bits
Score difference with first non-orthologous sequence - C.militaris:452 D.pseudoobscura:452

G3J6B5              	100.00%		I5ANU0              	100.00%
                    	       		Q290K1              	9.49%
Bootstrap support for G3J6B5 as seed ortholog is 100%.
Bootstrap support for I5ANU0 as seed ortholog is 100%.

Group of orthologs #307. Best score 452 bits
Score difference with first non-orthologous sequence - C.militaris:452 D.pseudoobscura:452

G3J3M6              	100.00%		Q28XT3              	100.00%
Bootstrap support for G3J3M6 as seed ortholog is 100%.
Bootstrap support for Q28XT3 as seed ortholog is 100%.

Group of orthologs #308. Best score 452 bits
Score difference with first non-orthologous sequence - C.militaris:452 D.pseudoobscura:452

G3J878              	100.00%		Q28WX8              	100.00%
Bootstrap support for G3J878 as seed ortholog is 100%.
Bootstrap support for Q28WX8 as seed ortholog is 100%.

Group of orthologs #309. Best score 452 bits
Score difference with first non-orthologous sequence - C.militaris:237 D.pseudoobscura:149

G3JJB3              	100.00%		Q291R3              	100.00%
Bootstrap support for G3JJB3 as seed ortholog is 100%.
Bootstrap support for Q291R3 as seed ortholog is 100%.

Group of orthologs #310. Best score 452 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:452

G3JRC2              	100.00%		Q29NC1              	100.00%
Bootstrap support for G3JRC2 as seed ortholog is 97%.
Bootstrap support for Q29NC1 as seed ortholog is 100%.

Group of orthologs #311. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 D.pseudoobscura:448

G3JGB2              	100.00%		Q29C43              	100.00%
G3JHD1              	33.36%		
G3JCA3              	27.12%		
Bootstrap support for G3JGB2 as seed ortholog is 100%.
Bootstrap support for Q29C43 as seed ortholog is 100%.

Group of orthologs #312. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 D.pseudoobscura:135

G3JDC6              	100.00%		Q29HB3              	100.00%
G3JQS0              	25.25%		
Bootstrap support for G3JDC6 as seed ortholog is 100%.
Bootstrap support for Q29HB3 as seed ortholog is 99%.

Group of orthologs #313. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 D.pseudoobscura:448

G3JH75              	100.00%		Q297I4              	100.00%
Bootstrap support for G3JH75 as seed ortholog is 100%.
Bootstrap support for Q297I4 as seed ortholog is 100%.

Group of orthologs #314. Best score 448 bits
Score difference with first non-orthologous sequence - C.militaris:448 D.pseudoobscura:448

G3JLP5              	100.00%		Q2M0L7              	100.00%
Bootstrap support for G3JLP5 as seed ortholog is 100%.
Bootstrap support for Q2M0L7 as seed ortholog is 100%.

Group of orthologs #315. Best score 447 bits
Score difference with first non-orthologous sequence - C.militaris:447 D.pseudoobscura:447

G3JCQ2              	100.00%		Q28YP5              	100.00%
Bootstrap support for G3JCQ2 as seed ortholog is 100%.
Bootstrap support for Q28YP5 as seed ortholog is 100%.

Group of orthologs #316. Best score 447 bits
Score difference with first non-orthologous sequence - C.militaris:24 D.pseudoobscura:447

G3J7Q7              	100.00%		Q29CK6              	100.00%
Bootstrap support for G3J7Q7 as seed ortholog is 64%.
Alternative seed ortholog is G3JS81 (24 bits away from this cluster)
Bootstrap support for Q29CK6 as seed ortholog is 100%.

Group of orthologs #317. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:445 D.pseudoobscura:445

G3J4B0              	100.00%		Q298T8              	100.00%
Bootstrap support for G3J4B0 as seed ortholog is 100%.
Bootstrap support for Q298T8 as seed ortholog is 100%.

Group of orthologs #318. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:445 D.pseudoobscura:262

G3J8I1              	100.00%		Q29ER5              	100.00%
Bootstrap support for G3J8I1 as seed ortholog is 100%.
Bootstrap support for Q29ER5 as seed ortholog is 100%.

Group of orthologs #319. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:237 D.pseudoobscura:60

G3JSY5              	100.00%		B5DYI6              	100.00%
Bootstrap support for G3JSY5 as seed ortholog is 100%.
Bootstrap support for B5DYI6 as seed ortholog is 97%.

Group of orthologs #320. Best score 445 bits
Score difference with first non-orthologous sequence - C.militaris:393 D.pseudoobscura:404

G3JDB0              	100.00%		Q29G84              	100.00%
Bootstrap support for G3JDB0 as seed ortholog is 100%.
Bootstrap support for Q29G84 as seed ortholog is 100%.

Group of orthologs #321. Best score 444 bits
Score difference with first non-orthologous sequence - C.militaris:444 D.pseudoobscura:444

G3JJN0              	100.00%		Q29AI0              	100.00%
Bootstrap support for G3JJN0 as seed ortholog is 100%.
Bootstrap support for Q29AI0 as seed ortholog is 100%.

Group of orthologs #322. Best score 444 bits
Score difference with first non-orthologous sequence - C.militaris:46 D.pseudoobscura:135

G3JSL1              	100.00%		Q29IL2              	100.00%
Bootstrap support for G3JSL1 as seed ortholog is 74%.
Alternative seed ortholog is G3JMV2 (46 bits away from this cluster)
Bootstrap support for Q29IL2 as seed ortholog is 98%.

Group of orthologs #323. Best score 442 bits
Score difference with first non-orthologous sequence - C.militaris:218 D.pseudoobscura:442

G3JKS5              	100.00%		Q296L9              	100.00%
G3JKQ9              	48.20%		
Bootstrap support for G3JKS5 as seed ortholog is 99%.
Bootstrap support for Q296L9 as seed ortholog is 100%.

Group of orthologs #324. Best score 442 bits
Score difference with first non-orthologous sequence - C.militaris:379 D.pseudoobscura:335

G3J5U9              	100.00%		Q29MB0              	100.00%
Bootstrap support for G3J5U9 as seed ortholog is 100%.
Bootstrap support for Q29MB0 as seed ortholog is 100%.

Group of orthologs #325. Best score 442 bits
Score difference with first non-orthologous sequence - C.militaris:109 D.pseudoobscura:442

G3JER6              	100.00%		Q29M34              	100.00%
Bootstrap support for G3JER6 as seed ortholog is 99%.
Bootstrap support for Q29M34 as seed ortholog is 100%.

Group of orthologs #326. Best score 441 bits
Score difference with first non-orthologous sequence - C.militaris:441 D.pseudoobscura:155

G3J705              	100.00%		Q29EQ6              	100.00%
Bootstrap support for G3J705 as seed ortholog is 100%.
Bootstrap support for Q29EQ6 as seed ortholog is 99%.

Group of orthologs #327. Best score 441 bits
Score difference with first non-orthologous sequence - C.militaris:441 D.pseudoobscura:296

G3JSU4              	100.00%		Q298U5              	100.00%
Bootstrap support for G3JSU4 as seed ortholog is 100%.
Bootstrap support for Q298U5 as seed ortholog is 100%.

Group of orthologs #328. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:439 D.pseudoobscura:439

G3J6H2              	100.00%		Q295Z3              	100.00%
Bootstrap support for G3J6H2 as seed ortholog is 100%.
Bootstrap support for Q295Z3 as seed ortholog is 100%.

Group of orthologs #329. Best score 439 bits
Score difference with first non-orthologous sequence - C.militaris:439 D.pseudoobscura:439

G3JD93              	100.00%		Q28X80              	100.00%
Bootstrap support for G3JD93 as seed ortholog is 100%.
Bootstrap support for Q28X80 as seed ortholog is 100%.

Group of orthologs #330. Best score 436 bits
Score difference with first non-orthologous sequence - C.militaris:287 D.pseudoobscura:436

G3J3Q7              	100.00%		Q29L99              	100.00%
Bootstrap support for G3J3Q7 as seed ortholog is 100%.
Bootstrap support for Q29L99 as seed ortholog is 100%.

Group of orthologs #331. Best score 434 bits
Score difference with first non-orthologous sequence - C.militaris:273 D.pseudoobscura:434

G3J4I5              	100.00%		B5DPA2              	100.00%
Bootstrap support for G3J4I5 as seed ortholog is 100%.
Bootstrap support for B5DPA2 as seed ortholog is 100%.

Group of orthologs #332. Best score 433 bits
Score difference with first non-orthologous sequence - C.militaris:433 D.pseudoobscura:362

G3J744              	100.00%		Q28ZL9              	100.00%
Bootstrap support for G3J744 as seed ortholog is 100%.
Bootstrap support for Q28ZL9 as seed ortholog is 100%.

Group of orthologs #333. Best score 431 bits
Score difference with first non-orthologous sequence - C.militaris:431 D.pseudoobscura:431

G3J341              	100.00%		Q28ZN4              	100.00%
Bootstrap support for G3J341 as seed ortholog is 100%.
Bootstrap support for Q28ZN4 as seed ortholog is 100%.

Group of orthologs #334. Best score 431 bits
Score difference with first non-orthologous sequence - C.militaris:431 D.pseudoobscura:175

G3J484              	100.00%		Q29H77              	100.00%
Bootstrap support for G3J484 as seed ortholog is 100%.
Bootstrap support for Q29H77 as seed ortholog is 100%.

Group of orthologs #335. Best score 431 bits
Score difference with first non-orthologous sequence - C.militaris:431 D.pseudoobscura:431

G3JGY5              	100.00%		Q29JS0              	100.00%
Bootstrap support for G3JGY5 as seed ortholog is 100%.
Bootstrap support for Q29JS0 as seed ortholog is 100%.

Group of orthologs #336. Best score 431 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:146

G3JCS5              	100.00%		Q2M086              	100.00%
Bootstrap support for G3JCS5 as seed ortholog is 100%.
Bootstrap support for Q2M086 as seed ortholog is 99%.

Group of orthologs #337. Best score 430 bits
Score difference with first non-orthologous sequence - C.militaris:430 D.pseudoobscura:430

G3J8P3              	100.00%		Q28XY9              	100.00%
Bootstrap support for G3J8P3 as seed ortholog is 100%.
Bootstrap support for Q28XY9 as seed ortholog is 100%.

Group of orthologs #338. Best score 430 bits
Score difference with first non-orthologous sequence - C.militaris:430 D.pseudoobscura:430

G3JRD1              	100.00%		B5DK75              	100.00%
Bootstrap support for G3JRD1 as seed ortholog is 100%.
Bootstrap support for B5DK75 as seed ortholog is 100%.

Group of orthologs #339. Best score 430 bits
Score difference with first non-orthologous sequence - C.militaris:332 D.pseudoobscura:250

G3JU98              	100.00%		Q29KV1              	100.00%
Bootstrap support for G3JU98 as seed ortholog is 100%.
Bootstrap support for Q29KV1 as seed ortholog is 100%.

Group of orthologs #340. Best score 429 bits
Score difference with first non-orthologous sequence - C.militaris:429 D.pseudoobscura:429

G3JCW8              	100.00%		Q29EJ7              	100.00%
Bootstrap support for G3JCW8 as seed ortholog is 100%.
Bootstrap support for Q29EJ7 as seed ortholog is 100%.

Group of orthologs #341. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:371 D.pseudoobscura:425

G3J9Z3              	100.00%		Q29MG3              	100.00%
G3JQQ6              	24.25%		
Bootstrap support for G3J9Z3 as seed ortholog is 100%.
Bootstrap support for Q29MG3 as seed ortholog is 100%.

Group of orthologs #342. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:268 D.pseudoobscura:351

G3J5B2              	100.00%		Q29FT0              	100.00%
Bootstrap support for G3J5B2 as seed ortholog is 100%.
Bootstrap support for Q29FT0 as seed ortholog is 100%.

Group of orthologs #343. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:425 D.pseudoobscura:316

G3JIB7              	100.00%		Q291A7              	100.00%
Bootstrap support for G3JIB7 as seed ortholog is 100%.
Bootstrap support for Q291A7 as seed ortholog is 100%.

Group of orthologs #344. Best score 425 bits
Score difference with first non-orthologous sequence - C.militaris:225 D.pseudoobscura:313

G3JPL1              	100.00%		Q28YP2              	100.00%
Bootstrap support for G3JPL1 as seed ortholog is 100%.
Bootstrap support for Q28YP2 as seed ortholog is 100%.

Group of orthologs #345. Best score 423 bits
Score difference with first non-orthologous sequence - C.militaris:290 D.pseudoobscura:142

G3J6B6              	100.00%		Q2M0E5              	100.00%
Bootstrap support for G3J6B6 as seed ortholog is 100%.
Bootstrap support for Q2M0E5 as seed ortholog is 99%.

Group of orthologs #346. Best score 422 bits
Score difference with first non-orthologous sequence - C.militaris:422 D.pseudoobscura:363

G3J983              	100.00%		Q294C5              	100.00%
                    	       		B5DXF8              	38.20%
Bootstrap support for G3J983 as seed ortholog is 100%.
Bootstrap support for Q294C5 as seed ortholog is 100%.

Group of orthologs #347. Best score 422 bits
Score difference with first non-orthologous sequence - C.militaris:422 D.pseudoobscura:99

G3JI38              	100.00%		Q28X45              	100.00%
Bootstrap support for G3JI38 as seed ortholog is 100%.
Bootstrap support for Q28X45 as seed ortholog is 98%.

Group of orthologs #348. Best score 421 bits
Score difference with first non-orthologous sequence - C.militaris:421 D.pseudoobscura:421

G3JN91              	100.00%		B5DKL9              	100.00%
Bootstrap support for G3JN91 as seed ortholog is 100%.
Bootstrap support for B5DKL9 as seed ortholog is 100%.

Group of orthologs #349. Best score 421 bits
Score difference with first non-orthologous sequence - C.militaris:256 D.pseudoobscura:248

G3JGQ8              	100.00%		Q29BB9              	100.00%
Bootstrap support for G3JGQ8 as seed ortholog is 100%.
Bootstrap support for Q29BB9 as seed ortholog is 100%.

Group of orthologs #350. Best score 421 bits
Score difference with first non-orthologous sequence - C.militaris:421 D.pseudoobscura:421

G3JQJ1              	100.00%		Q293L9              	100.00%
Bootstrap support for G3JQJ1 as seed ortholog is 100%.
Bootstrap support for Q293L9 as seed ortholog is 100%.

Group of orthologs #351. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:420 D.pseudoobscura:420

G3JN85              	100.00%		B5DN26              	100.00%
Bootstrap support for G3JN85 as seed ortholog is 100%.
Bootstrap support for B5DN26 as seed ortholog is 100%.

Group of orthologs #352. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:420 D.pseudoobscura:420

G3JF46              	100.00%		Q28ZC1              	100.00%
Bootstrap support for G3JF46 as seed ortholog is 100%.
Bootstrap support for Q28ZC1 as seed ortholog is 100%.

Group of orthologs #353. Best score 420 bits
Score difference with first non-orthologous sequence - C.militaris:420 D.pseudoobscura:170

G3J6S2              	100.00%		Q29EV0              	100.00%
Bootstrap support for G3J6S2 as seed ortholog is 100%.
Bootstrap support for Q29EV0 as seed ortholog is 99%.

Group of orthologs #354. Best score 419 bits
Score difference with first non-orthologous sequence - C.militaris:419 D.pseudoobscura:257

G3JQM4              	100.00%		Q29J05              	100.00%
Bootstrap support for G3JQM4 as seed ortholog is 100%.
Bootstrap support for Q29J05 as seed ortholog is 100%.

Group of orthologs #355. Best score 418 bits
Score difference with first non-orthologous sequence - C.militaris:418 D.pseudoobscura:418

G3JQF4              	100.00%		Q29GX2              	100.00%
Bootstrap support for G3JQF4 as seed ortholog is 100%.
Bootstrap support for Q29GX2 as seed ortholog is 100%.

Group of orthologs #356. Best score 417 bits
Score difference with first non-orthologous sequence - C.militaris:105 D.pseudoobscura:417

G3JQM9              	100.00%		I5ANP5              	100.00%
                    	       		I5ANG0              	17.21%
                    	       		B5DZU7              	7.05%
                    	       		Q291T3              	6.16%
Bootstrap support for G3JQM9 as seed ortholog is 98%.
Bootstrap support for I5ANP5 as seed ortholog is 100%.

Group of orthologs #357. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:416 D.pseudoobscura:416

G3JQQ9              	100.00%		Q29LG2              	100.00%
Bootstrap support for G3JQQ9 as seed ortholog is 100%.
Bootstrap support for Q29LG2 as seed ortholog is 100%.

Group of orthologs #358. Best score 416 bits
Score difference with first non-orthologous sequence - C.militaris:416 D.pseudoobscura:54

G3JQK1              	100.00%		Q29MP1              	100.00%
Bootstrap support for G3JQK1 as seed ortholog is 100%.
Bootstrap support for Q29MP1 as seed ortholog is 92%.

Group of orthologs #359. Best score 414 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:313

G3JKX3              	100.00%		Q29JN6              	100.00%
Bootstrap support for G3JKX3 as seed ortholog is 99%.
Bootstrap support for Q29JN6 as seed ortholog is 100%.

Group of orthologs #360. Best score 413 bits
Score difference with first non-orthologous sequence - C.militaris:413 D.pseudoobscura:413

G3JKX6              	100.00%		Q299D3              	100.00%
G3JQS5              	10.89%		
Bootstrap support for G3JKX6 as seed ortholog is 100%.
Bootstrap support for Q299D3 as seed ortholog is 100%.

Group of orthologs #361. Best score 413 bits
Score difference with first non-orthologous sequence - C.militaris:413 D.pseudoobscura:199

G3JJD6              	100.00%		B5E189              	100.00%
Bootstrap support for G3JJD6 as seed ortholog is 100%.
Bootstrap support for B5E189 as seed ortholog is 100%.

Group of orthologs #362. Best score 412 bits
Score difference with first non-orthologous sequence - C.militaris:225 D.pseudoobscura:175

G3JDX3              	100.00%		Q29IW3              	100.00%
Bootstrap support for G3JDX3 as seed ortholog is 100%.
Bootstrap support for Q29IW3 as seed ortholog is 100%.

Group of orthologs #363. Best score 412 bits
Score difference with first non-orthologous sequence - C.militaris:412 D.pseudoobscura:412

G3JMP6              	100.00%		Q29FE2              	100.00%
Bootstrap support for G3JMP6 as seed ortholog is 100%.
Bootstrap support for Q29FE2 as seed ortholog is 100%.

Group of orthologs #364. Best score 411 bits
Score difference with first non-orthologous sequence - C.militaris:411 D.pseudoobscura:411

G3J440              	100.00%		B5DU58              	100.00%
                    	       		B5DXK5              	99.17%
Bootstrap support for G3J440 as seed ortholog is 100%.
Bootstrap support for B5DU58 as seed ortholog is 100%.

Group of orthologs #365. Best score 410 bits
Score difference with first non-orthologous sequence - C.militaris:410 D.pseudoobscura:410

G3J391              	100.00%		B5DY99              	100.00%
                    	       		Q295S1              	43.08%
Bootstrap support for G3J391 as seed ortholog is 100%.
Bootstrap support for B5DY99 as seed ortholog is 100%.

Group of orthologs #366. Best score 410 bits
Score difference with first non-orthologous sequence - C.militaris:410 D.pseudoobscura:410

G3J7K9              	100.00%		Q29L00              	100.00%
Bootstrap support for G3J7K9 as seed ortholog is 100%.
Bootstrap support for Q29L00 as seed ortholog is 100%.

Group of orthologs #367. Best score 410 bits
Score difference with first non-orthologous sequence - C.militaris:410 D.pseudoobscura:410

G3JH04              	100.00%		Q29E26              	100.00%
Bootstrap support for G3JH04 as seed ortholog is 100%.
Bootstrap support for Q29E26 as seed ortholog is 100%.

Group of orthologs #368. Best score 408 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:128

G3JGM3              	100.00%		Q29D45              	100.00%
Bootstrap support for G3JGM3 as seed ortholog is 95%.
Bootstrap support for Q29D45 as seed ortholog is 99%.

Group of orthologs #369. Best score 406 bits
Score difference with first non-orthologous sequence - C.militaris:406 D.pseudoobscura:406

G3JGR9              	100.00%		B5DUR8              	100.00%
Bootstrap support for G3JGR9 as seed ortholog is 100%.
Bootstrap support for B5DUR8 as seed ortholog is 100%.

Group of orthologs #370. Best score 406 bits
Score difference with first non-orthologous sequence - C.militaris:406 D.pseudoobscura:406

G3J3N1              	100.00%		Q295J7              	100.00%
Bootstrap support for G3J3N1 as seed ortholog is 100%.
Bootstrap support for Q295J7 as seed ortholog is 100%.

Group of orthologs #371. Best score 406 bits
Score difference with first non-orthologous sequence - C.militaris:176 D.pseudoobscura:181

G3JBS7              	100.00%		Q292K7              	100.00%
Bootstrap support for G3JBS7 as seed ortholog is 99%.
Bootstrap support for Q292K7 as seed ortholog is 100%.

Group of orthologs #372. Best score 406 bits
Score difference with first non-orthologous sequence - C.militaris:406 D.pseudoobscura:406

G3JGJ1              	100.00%		Q28XJ0              	100.00%
Bootstrap support for G3JGJ1 as seed ortholog is 100%.
Bootstrap support for Q28XJ0 as seed ortholog is 100%.

Group of orthologs #373. Best score 405 bits
Score difference with first non-orthologous sequence - C.militaris:405 D.pseudoobscura:405

G3JE20              	100.00%		Q29GJ5              	100.00%
Bootstrap support for G3JE20 as seed ortholog is 100%.
Bootstrap support for Q29GJ5 as seed ortholog is 100%.

Group of orthologs #374. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 D.pseudoobscura:401

G3J6H5              	100.00%		B5E078              	100.00%
Bootstrap support for G3J6H5 as seed ortholog is 100%.
Bootstrap support for B5E078 as seed ortholog is 100%.

Group of orthologs #375. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:293 D.pseudoobscura:401

G3J2R7              	100.00%		Q290S2              	100.00%
Bootstrap support for G3J2R7 as seed ortholog is 100%.
Bootstrap support for Q290S2 as seed ortholog is 100%.

Group of orthologs #376. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 D.pseudoobscura:237

G3JKQ3              	100.00%		B5DZN8              	100.00%
Bootstrap support for G3JKQ3 as seed ortholog is 100%.
Bootstrap support for B5DZN8 as seed ortholog is 99%.

Group of orthologs #377. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 D.pseudoobscura:401

G3JLT7              	100.00%		Q290F6              	100.00%
Bootstrap support for G3JLT7 as seed ortholog is 100%.
Bootstrap support for Q290F6 as seed ortholog is 100%.

Group of orthologs #378. Best score 401 bits
Score difference with first non-orthologous sequence - C.militaris:401 D.pseudoobscura:401

G3JHE3              	100.00%		Q29CF1              	100.00%
Bootstrap support for G3JHE3 as seed ortholog is 100%.
Bootstrap support for Q29CF1 as seed ortholog is 100%.

Group of orthologs #379. Best score 400 bits
Score difference with first non-orthologous sequence - C.militaris:317 D.pseudoobscura:288

G3JRS0              	100.00%		B5DJJ9              	100.00%
Bootstrap support for G3JRS0 as seed ortholog is 100%.
Bootstrap support for B5DJJ9 as seed ortholog is 99%.

Group of orthologs #380. Best score 400 bits
Score difference with first non-orthologous sequence - C.militaris:400 D.pseudoobscura:400

G3JI75              	100.00%		Q2LZ76              	100.00%
Bootstrap support for G3JI75 as seed ortholog is 100%.
Bootstrap support for Q2LZ76 as seed ortholog is 100%.

Group of orthologs #381. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:399 D.pseudoobscura:399

G3J333              	100.00%		Q29DD3              	100.00%
Bootstrap support for G3J333 as seed ortholog is 100%.
Bootstrap support for Q29DD3 as seed ortholog is 100%.

Group of orthologs #382. Best score 399 bits
Score difference with first non-orthologous sequence - C.militaris:399 D.pseudoobscura:399

G3J2N0              	100.00%		Q29FD8              	100.00%
Bootstrap support for G3J2N0 as seed ortholog is 100%.
Bootstrap support for Q29FD8 as seed ortholog is 100%.

Group of orthologs #383. Best score 397 bits
Score difference with first non-orthologous sequence - C.militaris:397 D.pseudoobscura:294

G3JV08              	100.00%		B5DXS3              	100.00%
Bootstrap support for G3JV08 as seed ortholog is 100%.
Bootstrap support for B5DXS3 as seed ortholog is 100%.

Group of orthologs #384. Best score 394 bits
Score difference with first non-orthologous sequence - C.militaris:80 D.pseudoobscura:93

G3JM92              	100.00%		Q28XI2              	100.00%
                    	       		Q29F33              	18.38%
Bootstrap support for G3JM92 as seed ortholog is 99%.
Bootstrap support for Q28XI2 as seed ortholog is 98%.

Group of orthologs #385. Best score 394 bits
Score difference with first non-orthologous sequence - C.militaris:394 D.pseudoobscura:394

G3JNB5              	100.00%		Q29LZ8              	100.00%
Bootstrap support for G3JNB5 as seed ortholog is 100%.
Bootstrap support for Q29LZ8 as seed ortholog is 100%.

Group of orthologs #386. Best score 394 bits
Score difference with first non-orthologous sequence - C.militaris:137 D.pseudoobscura:14

G3JLM9              	100.00%		Q2LZZ7              	100.00%
Bootstrap support for G3JLM9 as seed ortholog is 99%.
Bootstrap support for Q2LZZ7 as seed ortholog is 90%.

Group of orthologs #387. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 D.pseudoobscura:393

G3J8E1              	100.00%		Q29P00              	100.00%
G3JDP2              	17.17%		
Bootstrap support for G3J8E1 as seed ortholog is 100%.
Bootstrap support for Q29P00 as seed ortholog is 100%.

Group of orthologs #388. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 D.pseudoobscura:126

G3JI01              	100.00%		Q2LZK2              	100.00%
                    	       		B5DLC8              	26.92%
Bootstrap support for G3JI01 as seed ortholog is 100%.
Bootstrap support for Q2LZK2 as seed ortholog is 99%.

Group of orthologs #389. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 D.pseudoobscura:393

G3J9E7              	100.00%		B5DNL3              	100.00%
Bootstrap support for G3J9E7 as seed ortholog is 100%.
Bootstrap support for B5DNL3 as seed ortholog is 100%.

Group of orthologs #390. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:288 D.pseudoobscura:183

G3J5D6              	100.00%		Q290C4              	100.00%
Bootstrap support for G3J5D6 as seed ortholog is 100%.
Bootstrap support for Q290C4 as seed ortholog is 100%.

Group of orthologs #391. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:122 D.pseudoobscura:52

G3J895              	100.00%		Q292K3              	100.00%
Bootstrap support for G3J895 as seed ortholog is 99%.
Bootstrap support for Q292K3 as seed ortholog is 89%.

Group of orthologs #392. Best score 393 bits
Score difference with first non-orthologous sequence - C.militaris:393 D.pseudoobscura:393

G3JF75              	100.00%		Q2LYK1              	100.00%
Bootstrap support for G3JF75 as seed ortholog is 100%.
Bootstrap support for Q2LYK1 as seed ortholog is 100%.

Group of orthologs #393. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:392 D.pseudoobscura:185

G3J8G1              	100.00%		Q29KT9              	100.00%
Bootstrap support for G3J8G1 as seed ortholog is 100%.
Bootstrap support for Q29KT9 as seed ortholog is 99%.

Group of orthologs #394. Best score 392 bits
Score difference with first non-orthologous sequence - C.militaris:9 D.pseudoobscura:127

G3JJB5              	100.00%		Q29G46              	100.00%
Bootstrap support for G3JJB5 as seed ortholog is 68%.
Alternative seed ortholog is G3JQW3 (9 bits away from this cluster)
Bootstrap support for Q29G46 as seed ortholog is 99%.

Group of orthologs #395. Best score 391 bits
Score difference with first non-orthologous sequence - C.militaris:391 D.pseudoobscura:391

G3JNM6              	100.00%		Q29H28              	100.00%
                    	       		Q29NQ0              	30.61%
Bootstrap support for G3JNM6 as seed ortholog is 100%.
Bootstrap support for Q29H28 as seed ortholog is 100%.

Group of orthologs #396. Best score 391 bits
Score difference with first non-orthologous sequence - C.militaris:391 D.pseudoobscura:391

G3JEJ4              	100.00%		B5DP22              	100.00%
Bootstrap support for G3JEJ4 as seed ortholog is 100%.
Bootstrap support for B5DP22 as seed ortholog is 100%.

Group of orthologs #397. Best score 391 bits
Score difference with first non-orthologous sequence - C.militaris:391 D.pseudoobscura:213

G3JJU8              	100.00%		I5AMY6              	100.00%
Bootstrap support for G3JJU8 as seed ortholog is 100%.
Bootstrap support for I5AMY6 as seed ortholog is 100%.

Group of orthologs #398. Best score 391 bits
Score difference with first non-orthologous sequence - C.militaris:391 D.pseudoobscura:391

G3JAL8              	100.00%		Q29ES0              	100.00%
Bootstrap support for G3JAL8 as seed ortholog is 100%.
Bootstrap support for Q29ES0 as seed ortholog is 100%.

Group of orthologs #399. Best score 390 bits
Score difference with first non-orthologous sequence - C.militaris:390 D.pseudoobscura:390

G3J601              	100.00%		Q28Z41              	100.00%
Bootstrap support for G3J601 as seed ortholog is 100%.
Bootstrap support for Q28Z41 as seed ortholog is 100%.

Group of orthologs #400. Best score 389 bits
Score difference with first non-orthologous sequence - C.militaris:389 D.pseudoobscura:389

G3JQQ3              	100.00%		B5DP06              	100.00%
Bootstrap support for G3JQQ3 as seed ortholog is 100%.
Bootstrap support for B5DP06 as seed ortholog is 100%.

Group of orthologs #401. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:388

G3JLZ6              	100.00%		B5DPQ3              	100.00%
                    	       		B5DL62              	17.16%
Bootstrap support for G3JLZ6 as seed ortholog is 99%.
Bootstrap support for B5DPQ3 as seed ortholog is 100%.

Group of orthologs #402. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:284 D.pseudoobscura:260

G3JL53              	100.00%		B5DI07              	100.00%
Bootstrap support for G3JL53 as seed ortholog is 100%.
Bootstrap support for B5DI07 as seed ortholog is 100%.

Group of orthologs #403. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:388 D.pseudoobscura:388

G3J5M1              	100.00%		Q296K7              	100.00%
Bootstrap support for G3J5M1 as seed ortholog is 100%.
Bootstrap support for Q296K7 as seed ortholog is 100%.

Group of orthologs #404. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:388

G3J6P2              	100.00%		Q29J51              	100.00%
Bootstrap support for G3J6P2 as seed ortholog is 99%.
Bootstrap support for Q29J51 as seed ortholog is 100%.

Group of orthologs #405. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:388 D.pseudoobscura:313

G3JL28              	100.00%		Q29C69              	100.00%
Bootstrap support for G3JL28 as seed ortholog is 100%.
Bootstrap support for Q29C69 as seed ortholog is 100%.

Group of orthologs #406. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:388 D.pseudoobscura:210

G3JLN6              	100.00%		Q29FL9              	100.00%
Bootstrap support for G3JLN6 as seed ortholog is 100%.
Bootstrap support for Q29FL9 as seed ortholog is 99%.

Group of orthologs #407. Best score 388 bits
Score difference with first non-orthologous sequence - C.militaris:388 D.pseudoobscura:202

G3JRK9              	100.00%		Q29AC1              	100.00%
Bootstrap support for G3JRK9 as seed ortholog is 100%.
Bootstrap support for Q29AC1 as seed ortholog is 100%.

Group of orthologs #408. Best score 387 bits
Score difference with first non-orthologous sequence - C.militaris:387 D.pseudoobscura:387

G3J9N3              	100.00%		Q29JV2              	100.00%
G3JPH6              	40.27%		
Bootstrap support for G3J9N3 as seed ortholog is 100%.
Bootstrap support for Q29JV2 as seed ortholog is 100%.

Group of orthologs #409. Best score 387 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:387

G3JQH6              	100.00%		Q2M0D6              	100.00%
                    	       		Q29JU0              	58.18%
Bootstrap support for G3JQH6 as seed ortholog is 96%.
Bootstrap support for Q2M0D6 as seed ortholog is 100%.

Group of orthologs #410. Best score 387 bits
Score difference with first non-orthologous sequence - C.militaris:295 D.pseudoobscura:387

G3J5H8              	100.00%		Q29EQ8              	100.00%
Bootstrap support for G3J5H8 as seed ortholog is 100%.
Bootstrap support for Q29EQ8 as seed ortholog is 100%.

Group of orthologs #411. Best score 385 bits
Score difference with first non-orthologous sequence - C.militaris:385 D.pseudoobscura:385

G3JJN2              	100.00%		Q29PE0              	100.00%
Bootstrap support for G3JJN2 as seed ortholog is 100%.
Bootstrap support for Q29PE0 as seed ortholog is 100%.

Group of orthologs #412. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:383 D.pseudoobscura:383

G3JL40              	100.00%		B5E081              	100.00%
Bootstrap support for G3JL40 as seed ortholog is 100%.
Bootstrap support for B5E081 as seed ortholog is 100%.

Group of orthologs #413. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:178 D.pseudoobscura:383

G3JCV7              	100.00%		Q29CH3              	100.00%
Bootstrap support for G3JCV7 as seed ortholog is 100%.
Bootstrap support for Q29CH3 as seed ortholog is 100%.

Group of orthologs #414. Best score 383 bits
Score difference with first non-orthologous sequence - C.militaris:383 D.pseudoobscura:383

G3JF21              	100.00%		Q2LZW6              	100.00%
Bootstrap support for G3JF21 as seed ortholog is 100%.
Bootstrap support for Q2LZW6 as seed ortholog is 100%.

Group of orthologs #415. Best score 382 bits
Score difference with first non-orthologous sequence - C.militaris:382 D.pseudoobscura:382

G3JPY0              	100.00%		Q29JW9              	100.00%
Bootstrap support for G3JPY0 as seed ortholog is 100%.
Bootstrap support for Q29JW9 as seed ortholog is 100%.

Group of orthologs #416. Best score 381 bits
Score difference with first non-orthologous sequence - C.militaris:381 D.pseudoobscura:381

G3JQL4              	100.00%		Q29D84              	100.00%
Bootstrap support for G3JQL4 as seed ortholog is 100%.
Bootstrap support for Q29D84 as seed ortholog is 100%.

Group of orthologs #417. Best score 380 bits
Score difference with first non-orthologous sequence - C.militaris:380 D.pseudoobscura:380

G3JFG0              	100.00%		B5DLB2              	100.00%
Bootstrap support for G3JFG0 as seed ortholog is 100%.
Bootstrap support for B5DLB2 as seed ortholog is 100%.

Group of orthologs #418. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:379 D.pseudoobscura:379

G3J3T8              	100.00%		Q29B16              	100.00%
Bootstrap support for G3J3T8 as seed ortholog is 100%.
Bootstrap support for Q29B16 as seed ortholog is 100%.

Group of orthologs #419. Best score 379 bits
Score difference with first non-orthologous sequence - C.militaris:241 D.pseudoobscura:137

G3JAD2              	100.00%		Q29CZ7              	100.00%
Bootstrap support for G3JAD2 as seed ortholog is 100%.
Bootstrap support for Q29CZ7 as seed ortholog is 99%.

Group of orthologs #420. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:378 D.pseudoobscura:378

G3JC03              	100.00%		Q298Q4              	100.00%
Bootstrap support for G3JC03 as seed ortholog is 100%.
Bootstrap support for Q298Q4 as seed ortholog is 100%.

Group of orthologs #421. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:378 D.pseudoobscura:378

G3J9R5              	100.00%		Q2M038              	100.00%
Bootstrap support for G3J9R5 as seed ortholog is 100%.
Bootstrap support for Q2M038 as seed ortholog is 100%.

Group of orthologs #422. Best score 378 bits
Score difference with first non-orthologous sequence - C.militaris:252 D.pseudoobscura:227

G3JPH7              	100.00%		Q29JE7              	100.00%
Bootstrap support for G3JPH7 as seed ortholog is 99%.
Bootstrap support for Q29JE7 as seed ortholog is 100%.

Group of orthologs #423. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:376 D.pseudoobscura:157

G3J3G5              	100.00%		Q29IY5              	100.00%
Bootstrap support for G3J3G5 as seed ortholog is 100%.
Bootstrap support for Q29IY5 as seed ortholog is 98%.

Group of orthologs #424. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:376 D.pseudoobscura:376

G3JD61              	100.00%		Q29HV6              	100.00%
Bootstrap support for G3JD61 as seed ortholog is 100%.
Bootstrap support for Q29HV6 as seed ortholog is 100%.

Group of orthologs #425. Best score 376 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:376

G3JKZ6              	100.00%		Q29IW2              	100.00%
Bootstrap support for G3JKZ6 as seed ortholog is 99%.
Bootstrap support for Q29IW2 as seed ortholog is 100%.

Group of orthologs #426. Best score 375 bits
Score difference with first non-orthologous sequence - C.militaris:375 D.pseudoobscura:375

G3JIA3              	100.00%		Q297T9              	100.00%
Bootstrap support for G3JIA3 as seed ortholog is 100%.
Bootstrap support for Q297T9 as seed ortholog is 100%.

Group of orthologs #427. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 D.pseudoobscura:373

G3JLG2              	100.00%		I7KU16              	100.00%
Bootstrap support for G3JLG2 as seed ortholog is 100%.
Bootstrap support for I7KU16 as seed ortholog is 100%.

Group of orthologs #428. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 D.pseudoobscura:373

G3JCX6              	100.00%		Q29FT4              	100.00%
Bootstrap support for G3JCX6 as seed ortholog is 100%.
Bootstrap support for Q29FT4 as seed ortholog is 100%.

Group of orthologs #429. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:170 D.pseudoobscura:85

G3J7F3              	100.00%		Q29NB1              	100.00%
Bootstrap support for G3J7F3 as seed ortholog is 99%.
Bootstrap support for Q29NB1 as seed ortholog is 99%.

Group of orthologs #430. Best score 373 bits
Score difference with first non-orthologous sequence - C.militaris:373 D.pseudoobscura:373

G3JU15              	100.00%		Q29MI2              	100.00%
Bootstrap support for G3JU15 as seed ortholog is 100%.
Bootstrap support for Q29MI2 as seed ortholog is 100%.

Group of orthologs #431. Best score 372 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:57

G3J6Y8              	100.00%		Q295U8              	100.00%
Bootstrap support for G3J6Y8 as seed ortholog is 100%.
Bootstrap support for Q295U8 as seed ortholog is 95%.

Group of orthologs #432. Best score 370 bits
Score difference with first non-orthologous sequence - C.militaris:370 D.pseudoobscura:370

G3JFT8              	100.00%		Q28Y45              	100.00%
Bootstrap support for G3JFT8 as seed ortholog is 100%.
Bootstrap support for Q28Y45 as seed ortholog is 100%.

Group of orthologs #433. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:280 D.pseudoobscura:145

G3JF32              	100.00%		B5DPN7              	100.00%
G3JS47              	100.00%		Q29I60              	100.00%
G3JBN0              	11.47%		B5DY81              	18.62%
                    	       		B5DK87              	16.56%
                    	       		Q29I59              	7.35%
Bootstrap support for G3JF32 as seed ortholog is 100%.
Bootstrap support for G3JS47 as seed ortholog is 99%.
Bootstrap support for B5DPN7 as seed ortholog is 98%.
Bootstrap support for Q29I60 as seed ortholog is 98%.

Group of orthologs #434. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 D.pseudoobscura:369

G3JIA7              	100.00%		Q29BZ6              	100.00%
G3JFI0              	22.92%		
Bootstrap support for G3JIA7 as seed ortholog is 100%.
Bootstrap support for Q29BZ6 as seed ortholog is 100%.

Group of orthologs #435. Best score 369 bits
Score difference with first non-orthologous sequence - C.militaris:369 D.pseudoobscura:369

G3J6S0              	100.00%		Q29NB4              	100.00%
Bootstrap support for G3J6S0 as seed ortholog is 100%.
Bootstrap support for Q29NB4 as seed ortholog is 100%.

Group of orthologs #436. Best score 368 bits
Score difference with first non-orthologous sequence - C.militaris:368 D.pseudoobscura:368

G3J818              	100.00%		Q29M26              	100.00%
Bootstrap support for G3J818 as seed ortholog is 100%.
Bootstrap support for Q29M26 as seed ortholog is 100%.

Group of orthologs #437. Best score 368 bits
Score difference with first non-orthologous sequence - C.militaris:368 D.pseudoobscura:368

G3JGP4              	100.00%		Q29FW1              	100.00%
Bootstrap support for G3JGP4 as seed ortholog is 100%.
Bootstrap support for Q29FW1 as seed ortholog is 100%.

Group of orthologs #438. Best score 368 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:368

G3JNK4              	100.00%		Q29FV1              	100.00%
Bootstrap support for G3JNK4 as seed ortholog is 99%.
Bootstrap support for Q29FV1 as seed ortholog is 100%.

Group of orthologs #439. Best score 367 bits
Score difference with first non-orthologous sequence - C.militaris:264 D.pseudoobscura:367

G3J7I6              	100.00%		B5DXU6              	100.00%
Bootstrap support for G3J7I6 as seed ortholog is 100%.
Bootstrap support for B5DXU6 as seed ortholog is 100%.

Group of orthologs #440. Best score 367 bits
Score difference with first non-orthologous sequence - C.militaris:367 D.pseudoobscura:367

G3JBD9              	100.00%		Q29FA8              	100.00%
Bootstrap support for G3JBD9 as seed ortholog is 100%.
Bootstrap support for Q29FA8 as seed ortholog is 100%.

Group of orthologs #441. Best score 366 bits
Score difference with first non-orthologous sequence - C.militaris:366 D.pseudoobscura:366

G3JQW2              	100.00%		Q28YH3              	100.00%
Bootstrap support for G3JQW2 as seed ortholog is 100%.
Bootstrap support for Q28YH3 as seed ortholog is 100%.

Group of orthologs #442. Best score 364 bits
Score difference with first non-orthologous sequence - C.militaris:364 D.pseudoobscura:364

G3JG05              	100.00%		B5DI51              	100.00%
Bootstrap support for G3JG05 as seed ortholog is 100%.
Bootstrap support for B5DI51 as seed ortholog is 100%.

Group of orthologs #443. Best score 364 bits
Score difference with first non-orthologous sequence - C.militaris:247 D.pseudoobscura:149

G3JKB0              	100.00%		Q29IZ7              	100.00%
Bootstrap support for G3JKB0 as seed ortholog is 100%.
Bootstrap support for Q29IZ7 as seed ortholog is 99%.

Group of orthologs #444. Best score 364 bits
Score difference with first non-orthologous sequence - C.militaris:364 D.pseudoobscura:114

G3JRD0              	100.00%		Q29G85              	100.00%
Bootstrap support for G3JRD0 as seed ortholog is 100%.
Bootstrap support for Q29G85 as seed ortholog is 99%.

Group of orthologs #445. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 D.pseudoobscura:363

G3J3Z3              	100.00%		Q29I48              	100.00%
                    	       		B5DJ87              	14.12%
Bootstrap support for G3J3Z3 as seed ortholog is 100%.
Bootstrap support for Q29I48 as seed ortholog is 100%.

Group of orthologs #446. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 D.pseudoobscura:363

G3JF53              	100.00%		Q299C1              	100.00%
Bootstrap support for G3JF53 as seed ortholog is 100%.
Bootstrap support for Q299C1 as seed ortholog is 100%.

Group of orthologs #447. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 D.pseudoobscura:363

G3JFZ7              	100.00%		Q299W8              	100.00%
Bootstrap support for G3JFZ7 as seed ortholog is 100%.
Bootstrap support for Q299W8 as seed ortholog is 100%.

Group of orthologs #448. Best score 363 bits
Score difference with first non-orthologous sequence - C.militaris:363 D.pseudoobscura:363

G3JBT0              	100.00%		Q29ER8              	100.00%
Bootstrap support for G3JBT0 as seed ortholog is 100%.
Bootstrap support for Q29ER8 as seed ortholog is 100%.

Group of orthologs #449. Best score 362 bits
Score difference with first non-orthologous sequence - C.militaris:362 D.pseudoobscura:362

G3J5X8              	100.00%		Q29IL4              	100.00%
Bootstrap support for G3J5X8 as seed ortholog is 100%.
Bootstrap support for Q29IL4 as seed ortholog is 100%.

Group of orthologs #450. Best score 361 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:172

G3JE03              	100.00%		Q298J6              	100.00%
                    	       		Q29K65              	60.88%
                    	       		B5DIM1              	48.70%
                    	       		B5DVL2              	20.73%
Bootstrap support for G3JE03 as seed ortholog is 89%.
Bootstrap support for Q298J6 as seed ortholog is 100%.

Group of orthologs #451. Best score 361 bits
Score difference with first non-orthologous sequence - C.militaris:222 D.pseudoobscura:121

G3J9J5              	100.00%		Q29LV7              	100.00%
Bootstrap support for G3J9J5 as seed ortholog is 99%.
Bootstrap support for Q29LV7 as seed ortholog is 97%.

Group of orthologs #452. Best score 360 bits
Score difference with first non-orthologous sequence - C.militaris:360 D.pseudoobscura:360

G3JM02              	100.00%		Q292X9              	100.00%
                    	       		Q29GD5              	10.94%
Bootstrap support for G3JM02 as seed ortholog is 100%.
Bootstrap support for Q292X9 as seed ortholog is 100%.

Group of orthologs #453. Best score 360 bits
Score difference with first non-orthologous sequence - C.militaris:282 D.pseudoobscura:189

G3JJ86              	100.00%		Q29HL0              	100.00%
Bootstrap support for G3JJ86 as seed ortholog is 100%.
Bootstrap support for Q29HL0 as seed ortholog is 100%.

Group of orthologs #454. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 D.pseudoobscura:359

G3J3S3              	100.00%		B5DX95              	100.00%
Bootstrap support for G3J3S3 as seed ortholog is 100%.
Bootstrap support for B5DX95 as seed ortholog is 100%.

Group of orthologs #455. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 D.pseudoobscura:359

G3JPX8              	100.00%		Q28WV0              	100.00%
Bootstrap support for G3JPX8 as seed ortholog is 100%.
Bootstrap support for Q28WV0 as seed ortholog is 100%.

Group of orthologs #456. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 D.pseudoobscura:359

G3JJF0              	100.00%		Q29K05              	100.00%
Bootstrap support for G3JJF0 as seed ortholog is 100%.
Bootstrap support for Q29K05 as seed ortholog is 100%.

Group of orthologs #457. Best score 359 bits
Score difference with first non-orthologous sequence - C.militaris:359 D.pseudoobscura:359

G3JGV2              	100.00%		Q29PI4              	100.00%
Bootstrap support for G3JGV2 as seed ortholog is 100%.
Bootstrap support for Q29PI4 as seed ortholog is 100%.

Group of orthologs #458. Best score 358 bits
Score difference with first non-orthologous sequence - C.militaris:358 D.pseudoobscura:358

G3J894              	100.00%		Q297V9              	100.00%
Bootstrap support for G3J894 as seed ortholog is 100%.
Bootstrap support for Q297V9 as seed ortholog is 100%.

Group of orthologs #459. Best score 358 bits
Score difference with first non-orthologous sequence - C.militaris:358 D.pseudoobscura:358

G3JH52              	100.00%		Q291S0              	100.00%
Bootstrap support for G3JH52 as seed ortholog is 100%.
Bootstrap support for Q291S0 as seed ortholog is 100%.

Group of orthologs #460. Best score 357 bits
Score difference with first non-orthologous sequence - C.militaris:357 D.pseudoobscura:357

G3JD95              	100.00%		Q29M02              	100.00%
Bootstrap support for G3JD95 as seed ortholog is 100%.
Bootstrap support for Q29M02 as seed ortholog is 100%.

Group of orthologs #461. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 D.pseudoobscura:356

G3J2T9              	100.00%		Q29IF6              	100.00%
                    	       		Q29IF7              	10.70%
Bootstrap support for G3J2T9 as seed ortholog is 100%.
Bootstrap support for Q29IF6 as seed ortholog is 100%.

Group of orthologs #462. Best score 356 bits
Score difference with first non-orthologous sequence - C.militaris:356 D.pseudoobscura:305

G3J5S1              	100.00%		Q29FX8              	100.00%
Bootstrap support for G3J5S1 as seed ortholog is 100%.
Bootstrap support for Q29FX8 as seed ortholog is 100%.

Group of orthologs #463. Best score 354 bits
Score difference with first non-orthologous sequence - C.militaris:354 D.pseudoobscura:354

G3J9K3              	100.00%		Q296T3              	100.00%
Bootstrap support for G3J9K3 as seed ortholog is 100%.
Bootstrap support for Q296T3 as seed ortholog is 100%.

Group of orthologs #464. Best score 354 bits
Score difference with first non-orthologous sequence - C.militaris:354 D.pseudoobscura:354

G3J6G5              	100.00%		Q29EY4              	100.00%
Bootstrap support for G3J6G5 as seed ortholog is 100%.
Bootstrap support for Q29EY4 as seed ortholog is 100%.

Group of orthologs #465. Best score 353 bits
Score difference with first non-orthologous sequence - C.militaris:353 D.pseudoobscura:353

G3JIC7              	100.00%		Q292S1              	100.00%
Bootstrap support for G3JIC7 as seed ortholog is 100%.
Bootstrap support for Q292S1 as seed ortholog is 100%.

Group of orthologs #466. Best score 353 bits
Score difference with first non-orthologous sequence - C.militaris:353 D.pseudoobscura:353

G3JGW6              	100.00%		Q29NY1              	100.00%
Bootstrap support for G3JGW6 as seed ortholog is 100%.
Bootstrap support for Q29NY1 as seed ortholog is 100%.

Group of orthologs #467. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:352 D.pseudoobscura:352

G3JB24              	100.00%		Q295H7              	100.00%
Bootstrap support for G3JB24 as seed ortholog is 100%.
Bootstrap support for Q295H7 as seed ortholog is 100%.

Group of orthologs #468. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:352 D.pseudoobscura:352

G3JIR1              	100.00%		Q29D62              	100.00%
Bootstrap support for G3JIR1 as seed ortholog is 100%.
Bootstrap support for Q29D62 as seed ortholog is 100%.

Group of orthologs #469. Best score 352 bits
Score difference with first non-orthologous sequence - C.militaris:237 D.pseudoobscura:219

G3JR03              	100.00%		Q29MT7              	100.00%
Bootstrap support for G3JR03 as seed ortholog is 100%.
Bootstrap support for Q29MT7 as seed ortholog is 100%.

Group of orthologs #470. Best score 351 bits
Score difference with first non-orthologous sequence - C.militaris:249 D.pseudoobscura:194

G3JGX6              	100.00%		Q2M0E3              	100.00%
G3JSJ7              	37.82%		
Bootstrap support for G3JGX6 as seed ortholog is 99%.
Bootstrap support for Q2M0E3 as seed ortholog is 99%.

Group of orthologs #471. Best score 350 bits
Score difference with first non-orthologous sequence - C.militaris:350 D.pseudoobscura:350

G3JNP9              	100.00%		Q28YJ2              	100.00%
Bootstrap support for G3JNP9 as seed ortholog is 100%.
Bootstrap support for Q28YJ2 as seed ortholog is 100%.

Group of orthologs #472. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:349 D.pseudoobscura:234

G3J5X1              	100.00%		Q29AN9              	100.00%
Bootstrap support for G3J5X1 as seed ortholog is 100%.
Bootstrap support for Q29AN9 as seed ortholog is 100%.

Group of orthologs #473. Best score 349 bits
Score difference with first non-orthologous sequence - C.militaris:159 D.pseudoobscura:132

G3JL94              	100.00%		Q297G9              	100.00%
Bootstrap support for G3JL94 as seed ortholog is 100%.
Bootstrap support for Q297G9 as seed ortholog is 99%.

Group of orthologs #474. Best score 348 bits
Score difference with first non-orthologous sequence - C.militaris:348 D.pseudoobscura:348

G3JFF7              	100.00%		Q298L5              	100.00%
Bootstrap support for G3JFF7 as seed ortholog is 100%.
Bootstrap support for Q298L5 as seed ortholog is 100%.

Group of orthologs #475. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:283 D.pseudoobscura:347

G3JA32              	100.00%		B5DZ19              	100.00%
Bootstrap support for G3JA32 as seed ortholog is 100%.
Bootstrap support for B5DZ19 as seed ortholog is 100%.

Group of orthologs #476. Best score 347 bits
Score difference with first non-orthologous sequence - C.militaris:347 D.pseudoobscura:347

G3JSQ8              	100.00%		Q28ZB7              	100.00%
Bootstrap support for G3JSQ8 as seed ortholog is 100%.
Bootstrap support for Q28ZB7 as seed ortholog is 100%.

Group of orthologs #477. Best score 344 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:344

G3JGE1              	100.00%		Q28XI8              	100.00%
Bootstrap support for G3JGE1 as seed ortholog is 99%.
Bootstrap support for Q28XI8 as seed ortholog is 100%.

Group of orthologs #478. Best score 344 bits
Score difference with first non-orthologous sequence - C.militaris:344 D.pseudoobscura:344

G3JFG3              	100.00%		Q29KB7              	100.00%
Bootstrap support for G3JFG3 as seed ortholog is 100%.
Bootstrap support for Q29KB7 as seed ortholog is 100%.

Group of orthologs #479. Best score 344 bits
Score difference with first non-orthologous sequence - C.militaris:344 D.pseudoobscura:151

G3JB65              	100.00%		Q2LZ70              	100.00%
Bootstrap support for G3JB65 as seed ortholog is 100%.
Bootstrap support for Q2LZ70 as seed ortholog is 99%.

Group of orthologs #480. Best score 344 bits
Score difference with first non-orthologous sequence - C.militaris:344 D.pseudoobscura:344

G3JGC1              	100.00%		Q29NT9              	100.00%
Bootstrap support for G3JGC1 as seed ortholog is 100%.
Bootstrap support for Q29NT9 as seed ortholog is 100%.

Group of orthologs #481. Best score 344 bits
Score difference with first non-orthologous sequence - C.militaris:27 D.pseudoobscura:225

G3JLI4              	100.00%		Q29ND9              	100.00%
Bootstrap support for G3JLI4 as seed ortholog is 61%.
Alternative seed ortholog is G3JSE8 (27 bits away from this cluster)
Bootstrap support for Q29ND9 as seed ortholog is 100%.

Group of orthologs #482. Best score 343 bits
Score difference with first non-orthologous sequence - C.militaris:343 D.pseudoobscura:343

G3JL41              	100.00%		Q293L0              	100.00%
Bootstrap support for G3JL41 as seed ortholog is 100%.
Bootstrap support for Q293L0 as seed ortholog is 100%.

Group of orthologs #483. Best score 343 bits
Score difference with first non-orthologous sequence - C.militaris:343 D.pseudoobscura:295

G3JL30              	100.00%		Q29JJ9              	100.00%
Bootstrap support for G3JL30 as seed ortholog is 100%.
Bootstrap support for Q29JJ9 as seed ortholog is 100%.

Group of orthologs #484. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 D.pseudoobscura:342

G3JK80              	100.00%		Q29ND6              	100.00%
                    	       		B5DKQ5              	95.00%
                    	       		B5DKQ3              	76.50%
                    	       		B5DSM5              	29.00%
Bootstrap support for G3JK80 as seed ortholog is 100%.
Bootstrap support for Q29ND6 as seed ortholog is 100%.

Group of orthologs #485. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 D.pseudoobscura:342

G3J6Z3              	100.00%		B5E0U9              	100.00%
Bootstrap support for G3J6Z3 as seed ortholog is 100%.
Bootstrap support for B5E0U9 as seed ortholog is 100%.

Group of orthologs #486. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:214 D.pseudoobscura:342

G3J9Q3              	100.00%		Q28XU5              	100.00%
Bootstrap support for G3J9Q3 as seed ortholog is 99%.
Bootstrap support for Q28XU5 as seed ortholog is 100%.

Group of orthologs #487. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 D.pseudoobscura:193

G3J3L7              	100.00%		Q29IU6              	100.00%
Bootstrap support for G3J3L7 as seed ortholog is 100%.
Bootstrap support for Q29IU6 as seed ortholog is 100%.

Group of orthologs #488. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:342 D.pseudoobscura:342

G3JGR5              	100.00%		Q29AF5              	100.00%
Bootstrap support for G3JGR5 as seed ortholog is 100%.
Bootstrap support for Q29AF5 as seed ortholog is 100%.

Group of orthologs #489. Best score 342 bits
Score difference with first non-orthologous sequence - C.militaris:15 D.pseudoobscura:56

G3JKE4              	100.00%		Q296W0              	100.00%
Bootstrap support for G3JKE4 as seed ortholog is 72%.
Alternative seed ortholog is G3JLG4 (15 bits away from this cluster)
Bootstrap support for Q296W0 as seed ortholog is 99%.

Group of orthologs #490. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 D.pseudoobscura:341

G3JU40              	100.00%		B5DL48              	100.00%
Bootstrap support for G3JU40 as seed ortholog is 100%.
Bootstrap support for B5DL48 as seed ortholog is 100%.

Group of orthologs #491. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:57

G3JFD3              	100.00%		Q29AX7              	100.00%
Bootstrap support for G3JFD3 as seed ortholog is 99%.
Bootstrap support for Q29AX7 as seed ortholog is 94%.

Group of orthologs #492. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 D.pseudoobscura:341

G3JKY9              	100.00%		Q29CF0              	100.00%
Bootstrap support for G3JKY9 as seed ortholog is 100%.
Bootstrap support for Q29CF0 as seed ortholog is 100%.

Group of orthologs #493. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 D.pseudoobscura:260

G3JET6              	100.00%		Q2M1B5              	100.00%
Bootstrap support for G3JET6 as seed ortholog is 100%.
Bootstrap support for Q2M1B5 as seed ortholog is 100%.

Group of orthologs #494. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 D.pseudoobscura:341

G3JHF7              	100.00%		Q2LZX2              	100.00%
Bootstrap support for G3JHF7 as seed ortholog is 100%.
Bootstrap support for Q2LZX2 as seed ortholog is 100%.

Group of orthologs #495. Best score 341 bits
Score difference with first non-orthologous sequence - C.militaris:341 D.pseudoobscura:341

G3JSZ1              	100.00%		Q29M77              	100.00%
Bootstrap support for G3JSZ1 as seed ortholog is 100%.
Bootstrap support for Q29M77 as seed ortholog is 100%.

Group of orthologs #496. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:340 D.pseudoobscura:340

G3J3X2              	100.00%		B5E031              	100.00%
Bootstrap support for G3J3X2 as seed ortholog is 100%.
Bootstrap support for B5E031 as seed ortholog is 100%.

Group of orthologs #497. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:340 D.pseudoobscura:340

G3J789              	100.00%		Q29NX2              	100.00%
Bootstrap support for G3J789 as seed ortholog is 100%.
Bootstrap support for Q29NX2 as seed ortholog is 100%.

Group of orthologs #498. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:340 D.pseudoobscura:340

G3JCS3              	100.00%		Q29IP7              	100.00%
Bootstrap support for G3JCS3 as seed ortholog is 100%.
Bootstrap support for Q29IP7 as seed ortholog is 100%.

Group of orthologs #499. Best score 340 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:69

G3JNU2              	100.00%		Q29A36              	100.00%
Bootstrap support for G3JNU2 as seed ortholog is 98%.
Bootstrap support for Q29A36 as seed ortholog is 90%.

Group of orthologs #500. Best score 339 bits
Score difference with first non-orthologous sequence - C.militaris:339 D.pseudoobscura:339

G3JD42              	100.00%		Q29CL0              	100.00%
                    	       		Q290I6              	27.59%
                    	       		Q292Z5              	25.52%
                    	       		Q29K30              	17.66%
                    	       		Q292Z7              	13.52%
Bootstrap support for G3JD42 as seed ortholog is 100%.
Bootstrap support for Q29CL0 as seed ortholog is 100%.

Group of orthologs #501. Best score 338 bits
Score difference with first non-orthologous sequence - C.militaris:338 D.pseudoobscura:258

G3JJE5              	100.00%		Q29NM6              	100.00%
                    	       		B5DUF5              	59.62%
                    	       		B5DNN5              	59.49%
Bootstrap support for G3JJE5 as seed ortholog is 100%.
Bootstrap support for Q29NM6 as seed ortholog is 100%.

Group of orthologs #502. Best score 338 bits
Score difference with first non-orthologous sequence - C.militaris:338 D.pseudoobscura:338

G3JCQ0              	100.00%		Q28YX8              	100.00%
Bootstrap support for G3JCQ0 as seed ortholog is 100%.
Bootstrap support for Q28YX8 as seed ortholog is 100%.

Group of orthologs #503. Best score 338 bits
Score difference with first non-orthologous sequence - C.militaris:338 D.pseudoobscura:338

G3JHW7              	100.00%		Q28XG3              	100.00%
Bootstrap support for G3JHW7 as seed ortholog is 100%.
Bootstrap support for Q28XG3 as seed ortholog is 100%.

Group of orthologs #504. Best score 337 bits
Score difference with first non-orthologous sequence - C.militaris:337 D.pseudoobscura:337

G3J7X2              	100.00%		Q29HK8              	100.00%
Bootstrap support for G3J7X2 as seed ortholog is 100%.
Bootstrap support for Q29HK8 as seed ortholog is 100%.

Group of orthologs #505. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:336 D.pseudoobscura:336

G3JJX6              	100.00%		B5DHP0              	100.00%
Bootstrap support for G3JJX6 as seed ortholog is 100%.
Bootstrap support for B5DHP0 as seed ortholog is 100%.

Group of orthologs #506. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:197 D.pseudoobscura:27

G3J655              	100.00%		Q29AP6              	100.00%
Bootstrap support for G3J655 as seed ortholog is 100%.
Bootstrap support for Q29AP6 as seed ortholog is 75%.

Group of orthologs #507. Best score 336 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:29

G3JH82              	100.00%		Q290U3              	100.00%
Bootstrap support for G3JH82 as seed ortholog is 99%.
Bootstrap support for Q290U3 as seed ortholog is 83%.

Group of orthologs #508. Best score 335 bits
Score difference with first non-orthologous sequence - C.militaris:335 D.pseudoobscura:335

G3J8X5              	100.00%		B5DX31              	100.00%
Bootstrap support for G3J8X5 as seed ortholog is 100%.
Bootstrap support for B5DX31 as seed ortholog is 100%.

Group of orthologs #509. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 D.pseudoobscura:208

G3JHM1              	100.00%		B5DPP1              	100.00%
Bootstrap support for G3JHM1 as seed ortholog is 100%.
Bootstrap support for B5DPP1 as seed ortholog is 100%.

Group of orthologs #510. Best score 334 bits
Score difference with first non-orthologous sequence - C.militaris:334 D.pseudoobscura:334

G3JAJ5              	100.00%		Q296C9              	100.00%
Bootstrap support for G3JAJ5 as seed ortholog is 100%.
Bootstrap support for Q296C9 as seed ortholog is 100%.

Group of orthologs #511. Best score 333 bits
Score difference with first non-orthologous sequence - C.militaris:147 D.pseudoobscura:333

G3JIJ1              	100.00%		Q29GE9              	100.00%
Bootstrap support for G3JIJ1 as seed ortholog is 99%.
Bootstrap support for Q29GE9 as seed ortholog is 100%.

Group of orthologs #512. Best score 332 bits
Score difference with first non-orthologous sequence - C.militaris:332 D.pseudoobscura:332

G3JLD7              	100.00%		Q29LL3              	100.00%
G3JS04              	13.42%		Q29LL4              	49.88%
                    	       		B5DZA0              	29.38%
                    	       		B5DZA2              	28.91%
                    	       		Q292I5              	28.08%
                    	       		B5DZA1              	26.78%
                    	       		Q292I4              	26.42%
                    	       		Q292I6              	25.24%
                    	       		Q292I7              	16.23%
Bootstrap support for G3JLD7 as seed ortholog is 100%.
Bootstrap support for Q29LL3 as seed ortholog is 100%.

Group of orthologs #513. Best score 332 bits
Score difference with first non-orthologous sequence - C.militaris:332 D.pseudoobscura:332

G3JM36              	100.00%		Q299Z8              	100.00%
Bootstrap support for G3JM36 as seed ortholog is 100%.
Bootstrap support for Q299Z8 as seed ortholog is 100%.

Group of orthologs #514. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:331 D.pseudoobscura:331

G3J723              	100.00%		Q29HE3              	100.00%
Bootstrap support for G3J723 as seed ortholog is 100%.
Bootstrap support for Q29HE3 as seed ortholog is 100%.

Group of orthologs #515. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:331 D.pseudoobscura:331

G3J9X8              	100.00%		Q29F06              	100.00%
Bootstrap support for G3J9X8 as seed ortholog is 100%.
Bootstrap support for Q29F06 as seed ortholog is 100%.

Group of orthologs #516. Best score 331 bits
Score difference with first non-orthologous sequence - C.militaris:331 D.pseudoobscura:331

G3JF68              	100.00%		Q29EI3              	100.00%
Bootstrap support for G3JF68 as seed ortholog is 100%.
Bootstrap support for Q29EI3 as seed ortholog is 100%.

Group of orthologs #517. Best score 330 bits
Score difference with first non-orthologous sequence - C.militaris:330 D.pseudoobscura:330

G3J3E1              	100.00%		Q298Z5              	100.00%
Bootstrap support for G3J3E1 as seed ortholog is 100%.
Bootstrap support for Q298Z5 as seed ortholog is 100%.

Group of orthologs #518. Best score 330 bits
Score difference with first non-orthologous sequence - C.militaris:330 D.pseudoobscura:330

G3J6H0              	100.00%		Q29M36              	100.00%
Bootstrap support for G3J6H0 as seed ortholog is 100%.
Bootstrap support for Q29M36 as seed ortholog is 100%.

Group of orthologs #519. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:220 D.pseudoobscura:8

G3JAU5              	100.00%		Q29GZ7              	100.00%
G3JTX8              	19.11%		
Bootstrap support for G3JAU5 as seed ortholog is 100%.
Bootstrap support for Q29GZ7 as seed ortholog is 96%.

Group of orthologs #520. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 D.pseudoobscura:329

G3JBK5              	100.00%		Q292C8              	100.00%
Bootstrap support for G3JBK5 as seed ortholog is 100%.
Bootstrap support for Q292C8 as seed ortholog is 100%.

Group of orthologs #521. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 D.pseudoobscura:329

G3J8H8              	100.00%		Q29FE7              	100.00%
Bootstrap support for G3J8H8 as seed ortholog is 100%.
Bootstrap support for Q29FE7 as seed ortholog is 100%.

Group of orthologs #522. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 D.pseudoobscura:329

G3JDR8              	100.00%		Q29EV1              	100.00%
Bootstrap support for G3JDR8 as seed ortholog is 100%.
Bootstrap support for Q29EV1 as seed ortholog is 100%.

Group of orthologs #523. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:329

G3J5S5              	100.00%		Q29NI5              	100.00%
Bootstrap support for G3J5S5 as seed ortholog is 99%.
Bootstrap support for Q29NI5 as seed ortholog is 100%.

Group of orthologs #524. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:329 D.pseudoobscura:44

G3JN77              	100.00%		Q29H82              	100.00%
Bootstrap support for G3JN77 as seed ortholog is 100%.
Bootstrap support for Q29H82 as seed ortholog is 74%.
Alternative seed ortholog is B5DZ24 (44 bits away from this cluster)

Group of orthologs #525. Best score 329 bits
Score difference with first non-orthologous sequence - C.militaris:252 D.pseudoobscura:214

G3JKI2              	100.00%		Q29KG2              	100.00%
Bootstrap support for G3JKI2 as seed ortholog is 100%.
Bootstrap support for Q29KG2 as seed ortholog is 100%.

Group of orthologs #526. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:183 D.pseudoobscura:89

G3JGS6              	100.00%		Q292G7              	100.00%
                    	       		Q291K6              	30.37%
                    	       		Q29KP5              	6.29%
Bootstrap support for G3JGS6 as seed ortholog is 100%.
Bootstrap support for Q292G7 as seed ortholog is 99%.

Group of orthologs #527. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:327 D.pseudoobscura:327

G3JJP7              	100.00%		B5DKH5              	100.00%
Bootstrap support for G3JJP7 as seed ortholog is 100%.
Bootstrap support for B5DKH5 as seed ortholog is 100%.

Group of orthologs #528. Best score 327 bits
Score difference with first non-orthologous sequence - C.militaris:327 D.pseudoobscura:327

G3JDF3              	100.00%		Q292P7              	100.00%
Bootstrap support for G3JDF3 as seed ortholog is 100%.
Bootstrap support for Q292P7 as seed ortholog is 100%.

Group of orthologs #529. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 D.pseudoobscura:326

G3JCQ8              	100.00%		Q290T2              	100.00%
                    	       		B5DWU6              	12.94%
                    	       		B5DWX7              	12.53%
                    	       		B5DW28              	7.47%
                    	       		Q294W2              	5.54%
Bootstrap support for G3JCQ8 as seed ortholog is 100%.
Bootstrap support for Q290T2 as seed ortholog is 100%.

Group of orthologs #530. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:326

G3JJU0              	100.00%		B5E1A1              	100.00%
Bootstrap support for G3JJU0 as seed ortholog is 99%.
Bootstrap support for B5E1A1 as seed ortholog is 100%.

Group of orthologs #531. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 D.pseudoobscura:326

G3JBL5              	100.00%		Q29EX3              	100.00%
Bootstrap support for G3JBL5 as seed ortholog is 100%.
Bootstrap support for Q29EX3 as seed ortholog is 100%.

Group of orthologs #532. Best score 326 bits
Score difference with first non-orthologous sequence - C.militaris:326 D.pseudoobscura:326

G3JP51              	100.00%		Q298Y4              	100.00%
Bootstrap support for G3JP51 as seed ortholog is 100%.
Bootstrap support for Q298Y4 as seed ortholog is 100%.

Group of orthologs #533. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:325 D.pseudoobscura:325

G3JKD1              	100.00%		Q29GW3              	100.00%
Bootstrap support for G3JKD1 as seed ortholog is 100%.
Bootstrap support for Q29GW3 as seed ortholog is 100%.

Group of orthologs #534. Best score 325 bits
Score difference with first non-orthologous sequence - C.militaris:325 D.pseudoobscura:325

G3JKY4              	100.00%		Q2M0S3              	100.00%
Bootstrap support for G3JKY4 as seed ortholog is 100%.
Bootstrap support for Q2M0S3 as seed ortholog is 100%.

Group of orthologs #535. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:324 D.pseudoobscura:324

G3JCP9              	100.00%		Q28XD0              	100.00%
Bootstrap support for G3JCP9 as seed ortholog is 100%.
Bootstrap support for Q28XD0 as seed ortholog is 100%.

Group of orthologs #536. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:263 D.pseudoobscura:228

G3JKV6              	100.00%		Q29N00              	100.00%
Bootstrap support for G3JKV6 as seed ortholog is 100%.
Bootstrap support for Q29N00 as seed ortholog is 100%.

Group of orthologs #537. Best score 324 bits
Score difference with first non-orthologous sequence - C.militaris:324 D.pseudoobscura:93

G3JNV5              	100.00%		Q29NP2              	100.00%
Bootstrap support for G3JNV5 as seed ortholog is 100%.
Bootstrap support for Q29NP2 as seed ortholog is 97%.

Group of orthologs #538. Best score 323 bits
Score difference with first non-orthologous sequence - C.militaris:323 D.pseudoobscura:323

G3J352              	100.00%		Q296V3              	100.00%
Bootstrap support for G3J352 as seed ortholog is 100%.
Bootstrap support for Q296V3 as seed ortholog is 100%.

Group of orthologs #539. Best score 323 bits
Score difference with first non-orthologous sequence - C.militaris:323 D.pseudoobscura:323

G3JEU0              	100.00%		Q28YL8              	100.00%
Bootstrap support for G3JEU0 as seed ortholog is 100%.
Bootstrap support for Q28YL8 as seed ortholog is 100%.

Group of orthologs #540. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:322 D.pseudoobscura:322

G3JKH5              	100.00%		B5DPB6              	100.00%
Bootstrap support for G3JKH5 as seed ortholog is 100%.
Bootstrap support for B5DPB6 as seed ortholog is 100%.

Group of orthologs #541. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:322 D.pseudoobscura:322

G3JCE9              	100.00%		Q29KG5              	100.00%
Bootstrap support for G3JCE9 as seed ortholog is 100%.
Bootstrap support for Q29KG5 as seed ortholog is 100%.

Group of orthologs #542. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:322 D.pseudoobscura:322

G3JE25              	100.00%		Q29J95              	100.00%
Bootstrap support for G3JE25 as seed ortholog is 100%.
Bootstrap support for Q29J95 as seed ortholog is 100%.

Group of orthologs #543. Best score 322 bits
Score difference with first non-orthologous sequence - C.militaris:322 D.pseudoobscura:322

G3JU27              	100.00%		Q29JW6              	100.00%
Bootstrap support for G3JU27 as seed ortholog is 100%.
Bootstrap support for Q29JW6 as seed ortholog is 100%.

Group of orthologs #544. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:17 D.pseudoobscura:321

G3JIQ4              	100.00%		Q293U0              	100.00%
                    	       		B5E0L9              	13.94%
                    	       		Q2M0C5              	9.70%
                    	       		B5DLR8              	9.39%
                    	       		Q2M0C6              	7.58%
                    	       		B5DLR9              	6.97%
Bootstrap support for G3JIQ4 as seed ortholog is 67%.
Alternative seed ortholog is G3JH70 (17 bits away from this cluster)
Bootstrap support for Q293U0 as seed ortholog is 100%.

Group of orthologs #545. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 D.pseudoobscura:321

G3JJM9              	100.00%		Q28ZX5              	100.00%
Bootstrap support for G3JJM9 as seed ortholog is 100%.
Bootstrap support for Q28ZX5 as seed ortholog is 100%.

Group of orthologs #546. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:321

G3J7T8              	100.00%		Q29LJ1              	100.00%
Bootstrap support for G3J7T8 as seed ortholog is 86%.
Bootstrap support for Q29LJ1 as seed ortholog is 100%.

Group of orthologs #547. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 D.pseudoobscura:321

G3J724              	100.00%		Q2LYP0              	100.00%
Bootstrap support for G3J724 as seed ortholog is 100%.
Bootstrap support for Q2LYP0 as seed ortholog is 100%.

Group of orthologs #548. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:216 D.pseudoobscura:21

G3JHM7              	100.00%		Q2M0P5              	100.00%
Bootstrap support for G3JHM7 as seed ortholog is 100%.
Bootstrap support for Q2M0P5 as seed ortholog is 89%.

Group of orthologs #549. Best score 321 bits
Score difference with first non-orthologous sequence - C.militaris:321 D.pseudoobscura:122

G3JPP9              	100.00%		Q29PM8              	100.00%
Bootstrap support for G3JPP9 as seed ortholog is 100%.
Bootstrap support for Q29PM8 as seed ortholog is 99%.

Group of orthologs #550. Best score 320 bits
Score difference with first non-orthologous sequence - C.militaris:320 D.pseudoobscura:320

G3J2Z9              	100.00%		I5ANT7              	100.00%
                    	       		Q298R8              	14.60%
Bootstrap support for G3J2Z9 as seed ortholog is 100%.
Bootstrap support for I5ANT7 as seed ortholog is 100%.

Group of orthologs #551. Best score 319 bits
Score difference with first non-orthologous sequence - C.militaris:319 D.pseudoobscura:319

G3J6F1              	100.00%		Q29BB3              	100.00%
Bootstrap support for G3J6F1 as seed ortholog is 100%.
Bootstrap support for Q29BB3 as seed ortholog is 100%.

Group of orthologs #552. Best score 319 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:167

G3JHK8              	100.00%		Q28Y67              	100.00%
Bootstrap support for G3JHK8 as seed ortholog is 99%.
Bootstrap support for Q28Y67 as seed ortholog is 99%.

Group of orthologs #553. Best score 319 bits
Score difference with first non-orthologous sequence - C.militaris:319 D.pseudoobscura:319

G3JPP3              	100.00%		Q29HG5              	100.00%
Bootstrap support for G3JPP3 as seed ortholog is 100%.
Bootstrap support for Q29HG5 as seed ortholog is 100%.

Group of orthologs #554. Best score 318 bits
Score difference with first non-orthologous sequence - C.militaris:318 D.pseudoobscura:318

G3JCW4              	100.00%		Q29G92              	100.00%
                    	       		Q299I7              	30.23%
                    	       		B5DTT7              	5.64%
Bootstrap support for G3JCW4 as seed ortholog is 100%.
Bootstrap support for Q29G92 as seed ortholog is 100%.

Group of orthologs #555. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:70

G3JAB2              	100.00%		B5DPG8              	100.00%
Bootstrap support for G3JAB2 as seed ortholog is 99%.
Bootstrap support for B5DPG8 as seed ortholog is 95%.

Group of orthologs #556. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:317 D.pseudoobscura:317

G3JQY5              	100.00%		Q291E2              	100.00%
Bootstrap support for G3JQY5 as seed ortholog is 100%.
Bootstrap support for Q291E2 as seed ortholog is 100%.

Group of orthologs #557. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:317 D.pseudoobscura:317

G3JHN2              	100.00%		Q29JD2              	100.00%
Bootstrap support for G3JHN2 as seed ortholog is 100%.
Bootstrap support for Q29JD2 as seed ortholog is 100%.

Group of orthologs #558. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:317 D.pseudoobscura:317

G3JV25              	100.00%		Q29CK9              	100.00%
Bootstrap support for G3JV25 as seed ortholog is 100%.
Bootstrap support for Q29CK9 as seed ortholog is 100%.

Group of orthologs #559. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:317 D.pseudoobscura:317

G3JPM7              	100.00%		Q29LG5              	100.00%
Bootstrap support for G3JPM7 as seed ortholog is 100%.
Bootstrap support for Q29LG5 as seed ortholog is 100%.

Group of orthologs #560. Best score 317 bits
Score difference with first non-orthologous sequence - C.militaris:317 D.pseudoobscura:92

G3JSS7              	100.00%		Q29L61              	100.00%
Bootstrap support for G3JSS7 as seed ortholog is 100%.
Bootstrap support for Q29L61 as seed ortholog is 95%.

Group of orthologs #561. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 D.pseudoobscura:316

G3J8A7              	100.00%		Q29A25              	100.00%
Bootstrap support for G3J8A7 as seed ortholog is 100%.
Bootstrap support for Q29A25 as seed ortholog is 100%.

Group of orthologs #562. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 D.pseudoobscura:208

G3JHQ2              	100.00%		Q29DW0              	100.00%
Bootstrap support for G3JHQ2 as seed ortholog is 100%.
Bootstrap support for Q29DW0 as seed ortholog is 100%.

Group of orthologs #563. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 D.pseudoobscura:316

G3JKF4              	100.00%		Q29DM5              	100.00%
Bootstrap support for G3JKF4 as seed ortholog is 100%.
Bootstrap support for Q29DM5 as seed ortholog is 100%.

Group of orthologs #564. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 D.pseudoobscura:316

G3JGM6              	100.00%		Q29L43              	100.00%
Bootstrap support for G3JGM6 as seed ortholog is 100%.
Bootstrap support for Q29L43 as seed ortholog is 100%.

Group of orthologs #565. Best score 316 bits
Score difference with first non-orthologous sequence - C.militaris:316 D.pseudoobscura:316

G3JUA4              	100.00%		Q29GP0              	100.00%
Bootstrap support for G3JUA4 as seed ortholog is 100%.
Bootstrap support for Q29GP0 as seed ortholog is 100%.

Group of orthologs #566. Best score 315 bits
Score difference with first non-orthologous sequence - C.militaris:199 D.pseudoobscura:315

G3JSE4              	100.00%		B5E1G9              	100.00%
                    	       		B5DZV0              	40.71%
Bootstrap support for G3JSE4 as seed ortholog is 99%.
Bootstrap support for B5E1G9 as seed ortholog is 100%.

Group of orthologs #567. Best score 315 bits
Score difference with first non-orthologous sequence - C.militaris:315 D.pseudoobscura:315

G3JPP8              	100.00%		Q29C13              	100.00%
                    	       		B5DTW2              	52.05%
Bootstrap support for G3JPP8 as seed ortholog is 100%.
Bootstrap support for Q29C13 as seed ortholog is 100%.

Group of orthologs #568. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:314 D.pseudoobscura:314

G3JN72              	100.00%		Q28Y18              	100.00%
Bootstrap support for G3JN72 as seed ortholog is 100%.
Bootstrap support for Q28Y18 as seed ortholog is 100%.

Group of orthologs #569. Best score 314 bits
Score difference with first non-orthologous sequence - C.militaris:314 D.pseudoobscura:314

G3JQ81              	100.00%		Q29DV7              	100.00%
Bootstrap support for G3JQ81 as seed ortholog is 100%.
Bootstrap support for Q29DV7 as seed ortholog is 100%.

Group of orthologs #570. Best score 313 bits
Score difference with first non-orthologous sequence - C.militaris:313 D.pseudoobscura:84

G3J5G2              	100.00%		Q28XF7              	100.00%
                    	       		Q28WL9              	32.43%
                    	       		Q29JH2              	31.47%
                    	       		Q28WM0              	30.12%
Bootstrap support for G3J5G2 as seed ortholog is 100%.
Bootstrap support for Q28XF7 as seed ortholog is 94%.

Group of orthologs #571. Best score 313 bits
Score difference with first non-orthologous sequence - C.militaris:137 D.pseudoobscura:42

G3J7Q9              	100.00%		Q29HY3              	100.00%
Bootstrap support for G3J7Q9 as seed ortholog is 100%.
Bootstrap support for Q29HY3 as seed ortholog is 97%.

Group of orthologs #572. Best score 313 bits
Score difference with first non-orthologous sequence - C.militaris:313 D.pseudoobscura:313

G3JHX1              	100.00%		Q29GY0              	100.00%
Bootstrap support for G3JHX1 as seed ortholog is 100%.
Bootstrap support for Q29GY0 as seed ortholog is 100%.

Group of orthologs #573. Best score 312 bits
Score difference with first non-orthologous sequence - C.militaris:312 D.pseudoobscura:312

G3JR85              	100.00%		B5DK39              	100.00%
Bootstrap support for G3JR85 as seed ortholog is 100%.
Bootstrap support for B5DK39 as seed ortholog is 100%.

Group of orthologs #574. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:311 D.pseudoobscura:311

G3JM80              	100.00%		Q299R6              	100.00%
Bootstrap support for G3JM80 as seed ortholog is 100%.
Bootstrap support for Q299R6 as seed ortholog is 100%.

Group of orthologs #575. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:311 D.pseudoobscura:311

G3J7A9              	100.00%		Q2M0R1              	100.00%
Bootstrap support for G3J7A9 as seed ortholog is 100%.
Bootstrap support for Q2M0R1 as seed ortholog is 100%.

Group of orthologs #576. Best score 311 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:311

G3JGP7              	100.00%		Q29IR8              	100.00%
Bootstrap support for G3JGP7 as seed ortholog is 94%.
Bootstrap support for Q29IR8 as seed ortholog is 100%.

Group of orthologs #577. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 D.pseudoobscura:310

G3J5I8              	100.00%		Q29PB8              	100.00%
Bootstrap support for G3J5I8 as seed ortholog is 100%.
Bootstrap support for Q29PB8 as seed ortholog is 100%.

Group of orthologs #578. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 D.pseudoobscura:310

G3JDX7              	100.00%		Q29L48              	100.00%
Bootstrap support for G3JDX7 as seed ortholog is 100%.
Bootstrap support for Q29L48 as seed ortholog is 100%.

Group of orthologs #579. Best score 310 bits
Score difference with first non-orthologous sequence - C.militaris:310 D.pseudoobscura:191

G3JIZ2              	100.00%		Q2LZI7              	100.00%
Bootstrap support for G3JIZ2 as seed ortholog is 100%.
Bootstrap support for Q2LZI7 as seed ortholog is 100%.

Group of orthologs #580. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:99 D.pseudoobscura:146

G3JJC6              	100.00%		B5DM48              	100.00%
Bootstrap support for G3JJC6 as seed ortholog is 99%.
Bootstrap support for B5DM48 as seed ortholog is 99%.

Group of orthologs #581. Best score 309 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:119

G3JRD7              	100.00%		Q29JK3              	100.00%
Bootstrap support for G3JRD7 as seed ortholog is 99%.
Bootstrap support for Q29JK3 as seed ortholog is 98%.

Group of orthologs #582. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:308 D.pseudoobscura:308

G3JFY1              	100.00%		Q2M015              	100.00%
                    	       		Q29DG4              	11.81%
Bootstrap support for G3JFY1 as seed ortholog is 100%.
Bootstrap support for Q2M015 as seed ortholog is 100%.

Group of orthologs #583. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:308 D.pseudoobscura:308

G3J6W9              	100.00%		I5ANZ0              	100.00%
Bootstrap support for G3J6W9 as seed ortholog is 100%.
Bootstrap support for I5ANZ0 as seed ortholog is 100%.

Group of orthologs #584. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:308 D.pseudoobscura:308

G3JFF9              	100.00%		Q298U4              	100.00%
Bootstrap support for G3JFF9 as seed ortholog is 100%.
Bootstrap support for Q298U4 as seed ortholog is 100%.

Group of orthologs #585. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:308 D.pseudoobscura:308

G3JA42              	100.00%		Q29IU4              	100.00%
Bootstrap support for G3JA42 as seed ortholog is 100%.
Bootstrap support for Q29IU4 as seed ortholog is 100%.

Group of orthologs #586. Best score 308 bits
Score difference with first non-orthologous sequence - C.militaris:308 D.pseudoobscura:308

G3JLR0              	100.00%		Q296G8              	100.00%
Bootstrap support for G3JLR0 as seed ortholog is 100%.
Bootstrap support for Q296G8 as seed ortholog is 100%.

Group of orthologs #587. Best score 307 bits
Score difference with first non-orthologous sequence - C.militaris:307 D.pseudoobscura:307

G3JUX0              	100.00%		Q29PM1              	100.00%
Bootstrap support for G3JUX0 as seed ortholog is 100%.
Bootstrap support for Q29PM1 as seed ortholog is 100%.

Group of orthologs #588. Best score 306 bits
Score difference with first non-orthologous sequence - C.militaris:306 D.pseudoobscura:306

G3JPP1              	100.00%		Q28ZX7              	100.00%
Bootstrap support for G3JPP1 as seed ortholog is 100%.
Bootstrap support for Q28ZX7 as seed ortholog is 100%.

Group of orthologs #589. Best score 305 bits
Score difference with first non-orthologous sequence - C.militaris:305 D.pseudoobscura:305

G3JIE8              	100.00%		Q291J6              	100.00%
Bootstrap support for G3JIE8 as seed ortholog is 100%.
Bootstrap support for Q291J6 as seed ortholog is 100%.

Group of orthologs #590. Best score 305 bits
Score difference with first non-orthologous sequence - C.militaris:305 D.pseudoobscura:305

G3JJM3              	100.00%		Q29LJ0              	100.00%
Bootstrap support for G3JJM3 as seed ortholog is 100%.
Bootstrap support for Q29LJ0 as seed ortholog is 100%.

Group of orthologs #591. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:184 D.pseudoobscura:87

G3J9W6              	100.00%		Q29B06              	100.00%
Bootstrap support for G3J9W6 as seed ortholog is 100%.
Bootstrap support for Q29B06 as seed ortholog is 99%.

Group of orthologs #592. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 D.pseudoobscura:84

G3JGA2              	100.00%		Q292B8              	100.00%
Bootstrap support for G3JGA2 as seed ortholog is 100%.
Bootstrap support for Q292B8 as seed ortholog is 99%.

Group of orthologs #593. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 D.pseudoobscura:304

G3JF67              	100.00%		Q297K5              	100.00%
Bootstrap support for G3JF67 as seed ortholog is 100%.
Bootstrap support for Q297K5 as seed ortholog is 100%.

Group of orthologs #594. Best score 304 bits
Score difference with first non-orthologous sequence - C.militaris:304 D.pseudoobscura:304

G3JPQ3              	100.00%		I5APZ0              	100.00%
Bootstrap support for G3JPQ3 as seed ortholog is 100%.
Bootstrap support for I5APZ0 as seed ortholog is 100%.

Group of orthologs #595. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:223 D.pseudoobscura:150

G3JT97              	100.00%		Q29PK4              	100.00%
G3JMH5              	100.00%		Q2M169              	100.00%
                    	       		Q29JS9              	8.78%
Bootstrap support for G3JT97 as seed ortholog is 99%.
Bootstrap support for G3JMH5 as seed ortholog is 99%.
Bootstrap support for Q29PK4 as seed ortholog is 99%.
Bootstrap support for Q2M169 as seed ortholog is 98%.

Group of orthologs #596. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 D.pseudoobscura:302

G3J9I4              	100.00%		Q292D8              	100.00%
Bootstrap support for G3J9I4 as seed ortholog is 100%.
Bootstrap support for Q292D8 as seed ortholog is 100%.

Group of orthologs #597. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:127 D.pseudoobscura:302

G3JHD3              	100.00%		Q297T2              	100.00%
Bootstrap support for G3JHD3 as seed ortholog is 99%.
Bootstrap support for Q297T2 as seed ortholog is 100%.

Group of orthologs #598. Best score 302 bits
Score difference with first non-orthologous sequence - C.militaris:302 D.pseudoobscura:189

G3JGR0              	100.00%		Q29HJ1              	100.00%
Bootstrap support for G3JGR0 as seed ortholog is 100%.
Bootstrap support for Q29HJ1 as seed ortholog is 100%.

Group of orthologs #599. Best score 301 bits
Score difference with first non-orthologous sequence - C.militaris:229 D.pseudoobscura:301

G3J3L1              	100.00%		Q29K04              	100.00%
Bootstrap support for G3J3L1 as seed ortholog is 100%.
Bootstrap support for Q29K04 as seed ortholog is 100%.

Group of orthologs #600. Best score 301 bits
Score difference with first non-orthologous sequence - C.militaris:301 D.pseudoobscura:301

G3JKX1              	100.00%		Q296M0              	100.00%
Bootstrap support for G3JKX1 as seed ortholog is 100%.
Bootstrap support for Q296M0 as seed ortholog is 100%.

Group of orthologs #601. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 D.pseudoobscura:300

G3J6V3              	100.00%		Q293R5              	100.00%
Bootstrap support for G3J6V3 as seed ortholog is 100%.
Bootstrap support for Q293R5 as seed ortholog is 100%.

Group of orthologs #602. Best score 300 bits
Score difference with first non-orthologous sequence - C.militaris:300 D.pseudoobscura:300

G3JPZ1              	100.00%		Q29J17              	100.00%
Bootstrap support for G3JPZ1 as seed ortholog is 100%.
Bootstrap support for Q29J17 as seed ortholog is 100%.

Group of orthologs #603. Best score 299 bits
Score difference with first non-orthologous sequence - C.militaris:299 D.pseudoobscura:299

G3JHY4              	100.00%		Q28ZI4              	100.00%
                    	       		Q29PG9              	13.82%
Bootstrap support for G3JHY4 as seed ortholog is 100%.
Bootstrap support for Q28ZI4 as seed ortholog is 100%.

Group of orthologs #604. Best score 298 bits
Score difference with first non-orthologous sequence - C.militaris:298 D.pseudoobscura:298

G3J371              	100.00%		Q2M1A7              	100.00%
Bootstrap support for G3J371 as seed ortholog is 100%.
Bootstrap support for Q2M1A7 as seed ortholog is 100%.

Group of orthologs #605. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:107

G3J6V2              	100.00%		B5DLA1              	100.00%
                    	       		Q29IS8              	45.88%
                    	       		Q29IS1              	41.51%
                    	       		Q29IS7              	34.99%
                    	       		Q297A4              	22.08%
                    	       		Q29IS3              	18.51%
                    	       		Q29IT0              	16.28%
                    	       		Q29IS9              	15.77%
                    	       		Q29IT2              	15.26%
                    	       		P18172              	14.85%
                    	       		Q29IT1              	14.75%
                    	       		Q29IS6              	7.83%
                    	       		Q29IS5              	6.21%
Bootstrap support for G3J6V2 as seed ortholog is 91%.
Bootstrap support for B5DLA1 as seed ortholog is 97%.

Group of orthologs #606. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:297 D.pseudoobscura:297

G3J3G8              	100.00%		B5DIE4              	100.00%
Bootstrap support for G3J3G8 as seed ortholog is 100%.
Bootstrap support for B5DIE4 as seed ortholog is 100%.

Group of orthologs #607. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:297 D.pseudoobscura:297

G3J7Y8              	100.00%		Q29FD7              	100.00%
Bootstrap support for G3J7Y8 as seed ortholog is 100%.
Bootstrap support for Q29FD7 as seed ortholog is 100%.

Group of orthologs #608. Best score 297 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3J468              	100.00%		Q29N73              	100.00%
Bootstrap support for G3J468 as seed ortholog is 100%.
Bootstrap support for Q29N73 as seed ortholog is 100%.

Group of orthologs #609. Best score 296 bits
Score difference with first non-orthologous sequence - C.militaris:296 D.pseudoobscura:296

G3JND4              	100.00%		Q295T2              	100.00%
                    	       		B5DH41              	31.28%
Bootstrap support for G3JND4 as seed ortholog is 100%.
Bootstrap support for Q295T2 as seed ortholog is 100%.

Group of orthologs #610. Best score 296 bits
Score difference with first non-orthologous sequence - C.militaris:147 D.pseudoobscura:171

G3JNA2              	100.00%		B5DHR7              	100.00%
Bootstrap support for G3JNA2 as seed ortholog is 99%.
Bootstrap support for B5DHR7 as seed ortholog is 99%.

Group of orthologs #611. Best score 296 bits
Score difference with first non-orthologous sequence - C.militaris:296 D.pseudoobscura:296

G3JMR5              	100.00%		I7LZD2              	100.00%
Bootstrap support for G3JMR5 as seed ortholog is 100%.
Bootstrap support for I7LZD2 as seed ortholog is 100%.

Group of orthologs #612. Best score 296 bits
Score difference with first non-orthologous sequence - C.militaris:152 D.pseudoobscura:130

G3J989              	100.00%		Q2M0W7              	100.00%
Bootstrap support for G3J989 as seed ortholog is 99%.
Bootstrap support for Q2M0W7 as seed ortholog is 98%.

Group of orthologs #613. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:154 D.pseudoobscura:170

G3J8Z7              	100.00%		Q29IF8              	100.00%
                    	       		Q28XG0              	13.45%
Bootstrap support for G3J8Z7 as seed ortholog is 99%.
Bootstrap support for Q29IF8 as seed ortholog is 99%.

Group of orthologs #614. Best score 295 bits
Score difference with first non-orthologous sequence - C.militaris:295 D.pseudoobscura:295

G3JLQ0              	100.00%		Q29G67              	100.00%
Bootstrap support for G3JLQ0 as seed ortholog is 100%.
Bootstrap support for Q29G67 as seed ortholog is 100%.

Group of orthologs #615. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:35

G3JAU0              	100.00%		Q295U1              	100.00%
G3JRS3              	5.22%		
Bootstrap support for G3JAU0 as seed ortholog is 99%.
Bootstrap support for Q295U1 as seed ortholog is 77%.

Group of orthologs #616. Best score 294 bits
Score difference with first non-orthologous sequence - C.militaris:294 D.pseudoobscura:221

G3JTP5              	100.00%		Q29K75              	100.00%
Bootstrap support for G3JTP5 as seed ortholog is 100%.
Bootstrap support for Q29K75 as seed ortholog is 100%.

Group of orthologs #617. Best score 293 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:215

G3J921              	100.00%		Q28YP7              	100.00%
Bootstrap support for G3J921 as seed ortholog is 98%.
Bootstrap support for Q28YP7 as seed ortholog is 99%.

Group of orthologs #618. Best score 293 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:44

G3JIZ3              	100.00%		Q29E52              	100.00%
Bootstrap support for G3JIZ3 as seed ortholog is 96%.
Bootstrap support for Q29E52 as seed ortholog is 88%.

Group of orthologs #619. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:292

G3JSV2              	100.00%		Q29EG3              	100.00%
                    	       		Q29GS4              	9.35%
                    	       		Q28X77              	8.43%
                    	       		B5DN57              	7.61%
Bootstrap support for G3JSV2 as seed ortholog is 88%.
Bootstrap support for Q29EG3 as seed ortholog is 100%.

Group of orthologs #620. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:22

G3J3B1              	100.00%		B5DP50              	100.00%
                    	       		B5DP49              	78.89%
                    	       		Q29E87              	31.39%
Bootstrap support for G3J3B1 as seed ortholog is 100%.
Bootstrap support for B5DP50 as seed ortholog is 79%.

Group of orthologs #621. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:292 D.pseudoobscura:292

G3JCJ8              	100.00%		Q28YP6              	100.00%
Bootstrap support for G3JCJ8 as seed ortholog is 100%.
Bootstrap support for Q28YP6 as seed ortholog is 100%.

Group of orthologs #622. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:94 D.pseudoobscura:292

G3JG47              	100.00%		Q29E71              	100.00%
Bootstrap support for G3JG47 as seed ortholog is 99%.
Bootstrap support for Q29E71 as seed ortholog is 100%.

Group of orthologs #623. Best score 292 bits
Score difference with first non-orthologous sequence - C.militaris:292 D.pseudoobscura:292

G3JU64              	100.00%		Q296E3              	100.00%
Bootstrap support for G3JU64 as seed ortholog is 100%.
Bootstrap support for Q296E3 as seed ortholog is 100%.

Group of orthologs #624. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:220

G3JNC7              	100.00%		B5DZA9              	100.00%
G3JQC8              	100.00%		Q29KS1              	100.00%
G3JS17              	35.07%		B5DZ78              	27.71%
Bootstrap support for G3JNC7 as seed ortholog is 99%.
Bootstrap support for G3JQC8 as seed ortholog is 99%.
Bootstrap support for B5DZA9 as seed ortholog is 99%.
Bootstrap support for Q29KS1 as seed ortholog is 99%.

Group of orthologs #625. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 D.pseudoobscura:226

G3J4C1              	100.00%		Q29G24              	100.00%
Bootstrap support for G3J4C1 as seed ortholog is 100%.
Bootstrap support for Q29G24 as seed ortholog is 100%.

Group of orthologs #626. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:139

G3JNA8              	100.00%		Q296V6              	100.00%
Bootstrap support for G3JNA8 as seed ortholog is 100%.
Bootstrap support for Q296V6 as seed ortholog is 100%.

Group of orthologs #627. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 D.pseudoobscura:291

G3JF48              	100.00%		Q29JC6              	100.00%
Bootstrap support for G3JF48 as seed ortholog is 100%.
Bootstrap support for Q29JC6 as seed ortholog is 100%.

Group of orthologs #628. Best score 291 bits
Score difference with first non-orthologous sequence - C.militaris:291 D.pseudoobscura:194

G3JGZ8              	100.00%		Q29JK0              	100.00%
Bootstrap support for G3JGZ8 as seed ortholog is 100%.
Bootstrap support for Q29JK0 as seed ortholog is 100%.

Group of orthologs #629. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:31 D.pseudoobscura:290

G3JFB2              	100.00%		B5DX70              	100.00%
G3JLJ9              	51.56%		I5APV8              	65.11%
                    	       		B5DWY2              	50.12%
Bootstrap support for G3JFB2 as seed ortholog is 80%.
Bootstrap support for B5DX70 as seed ortholog is 100%.

Group of orthologs #630. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:290 D.pseudoobscura:290

G3JG22              	100.00%		Q28YB8              	100.00%
                    	       		B5DHH8              	81.31%
                    	       		B5DHH6              	80.95%
Bootstrap support for G3JG22 as seed ortholog is 100%.
Bootstrap support for Q28YB8 as seed ortholog is 100%.

Group of orthologs #631. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:290 D.pseudoobscura:151

G3J962              	100.00%		Q299T0              	100.00%
Bootstrap support for G3J962 as seed ortholog is 100%.
Bootstrap support for Q299T0 as seed ortholog is 99%.

Group of orthologs #632. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:290 D.pseudoobscura:290

G3J5J4              	100.00%		Q29JY7              	100.00%
Bootstrap support for G3J5J4 as seed ortholog is 100%.
Bootstrap support for Q29JY7 as seed ortholog is 100%.

Group of orthologs #633. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:290

G3JCY5              	100.00%		Q2LZF1              	100.00%
Bootstrap support for G3JCY5 as seed ortholog is 98%.
Bootstrap support for Q2LZF1 as seed ortholog is 100%.

Group of orthologs #634. Best score 290 bits
Score difference with first non-orthologous sequence - C.militaris:290 D.pseudoobscura:290

G3JM44              	100.00%		Q29HM4              	100.00%
Bootstrap support for G3JM44 as seed ortholog is 100%.
Bootstrap support for Q29HM4 as seed ortholog is 100%.

Group of orthologs #635. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:73 D.pseudoobscura:289

G3J3L8              	100.00%		B5E0G3              	100.00%
                    	       		Q293S6              	10.37%
Bootstrap support for G3J3L8 as seed ortholog is 99%.
Bootstrap support for B5E0G3 as seed ortholog is 100%.

Group of orthologs #636. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 D.pseudoobscura:126

G3JP39              	100.00%		Q290J2              	100.00%
G3J863              	15.91%		
Bootstrap support for G3JP39 as seed ortholog is 100%.
Bootstrap support for Q290J2 as seed ortholog is 99%.

Group of orthologs #637. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 D.pseudoobscura:155

G3J8P6              	100.00%		Q2M187              	100.00%
                    	       		Q29JC3              	13.51%
Bootstrap support for G3J8P6 as seed ortholog is 100%.
Bootstrap support for Q2M187 as seed ortholog is 100%.

Group of orthologs #638. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:140

G3JQJ4              	100.00%		B5DUQ0              	100.00%
Bootstrap support for G3JQJ4 as seed ortholog is 100%.
Bootstrap support for B5DUQ0 as seed ortholog is 100%.

Group of orthologs #639. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:68

G3JH49              	100.00%		Q290T0              	100.00%
Bootstrap support for G3JH49 as seed ortholog is 90%.
Bootstrap support for Q290T0 as seed ortholog is 97%.

Group of orthologs #640. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 D.pseudoobscura:289

G3JCJ5              	100.00%		Q29NB3              	100.00%
Bootstrap support for G3JCJ5 as seed ortholog is 100%.
Bootstrap support for Q29NB3 as seed ortholog is 100%.

Group of orthologs #641. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 D.pseudoobscura:289

G3JQI3              	100.00%		Q29BB7              	100.00%
Bootstrap support for G3JQI3 as seed ortholog is 100%.
Bootstrap support for Q29BB7 as seed ortholog is 100%.

Group of orthologs #642. Best score 289 bits
Score difference with first non-orthologous sequence - C.militaris:289 D.pseudoobscura:289

G3JQ95              	100.00%		Q29NS9              	100.00%
Bootstrap support for G3JQ95 as seed ortholog is 100%.
Bootstrap support for Q29NS9 as seed ortholog is 100%.

Group of orthologs #643. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 D.pseudoobscura:55

G3JIB5              	100.00%		B5DLT3              	100.00%
                    	       		Q29EH9              	10.97%
Bootstrap support for G3JIB5 as seed ortholog is 100%.
Bootstrap support for B5DLT3 as seed ortholog is 93%.

Group of orthologs #644. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 D.pseudoobscura:125

G3JE65              	100.00%		Q293V2              	100.00%
Bootstrap support for G3JE65 as seed ortholog is 100%.
Bootstrap support for Q293V2 as seed ortholog is 99%.

Group of orthologs #645. Best score 288 bits
Score difference with first non-orthologous sequence - C.militaris:288 D.pseudoobscura:202

G3JMR6              	100.00%		Q29EE2              	100.00%
Bootstrap support for G3JMR6 as seed ortholog is 100%.
Bootstrap support for Q29EE2 as seed ortholog is 100%.

Group of orthologs #646. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 D.pseudoobscura:287

G3JI72              	100.00%		Q29I22              	100.00%
                    	       		B5DPL2              	24.50%
Bootstrap support for G3JI72 as seed ortholog is 100%.
Bootstrap support for Q29I22 as seed ortholog is 100%.

Group of orthologs #647. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 D.pseudoobscura:287

G3J4T3              	100.00%		Q297F0              	100.00%
Bootstrap support for G3J4T3 as seed ortholog is 100%.
Bootstrap support for Q297F0 as seed ortholog is 100%.

Group of orthologs #648. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 D.pseudoobscura:287

G3JI78              	100.00%		Q29JX1              	100.00%
Bootstrap support for G3JI78 as seed ortholog is 100%.
Bootstrap support for Q29JX1 as seed ortholog is 100%.

Group of orthologs #649. Best score 287 bits
Score difference with first non-orthologous sequence - C.militaris:287 D.pseudoobscura:287

G3JQ18              	100.00%		Q2M0G0              	100.00%
Bootstrap support for G3JQ18 as seed ortholog is 100%.
Bootstrap support for Q2M0G0 as seed ortholog is 100%.

Group of orthologs #650. Best score 286 bits
Score difference with first non-orthologous sequence - C.militaris:286 D.pseudoobscura:286

G3J8Z3              	100.00%		Q299W4              	100.00%
Bootstrap support for G3J8Z3 as seed ortholog is 100%.
Bootstrap support for Q299W4 as seed ortholog is 100%.

Group of orthologs #651. Best score 286 bits
Score difference with first non-orthologous sequence - C.militaris:185 D.pseudoobscura:44

G3JV30              	100.00%		Q28YV1              	100.00%
Bootstrap support for G3JV30 as seed ortholog is 100%.
Bootstrap support for Q28YV1 as seed ortholog is 98%.

Group of orthologs #652. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:211

G3JLD1              	100.00%		Q2LZS8              	100.00%
                    	       		Q28ZA7              	57.86%
Bootstrap support for G3JLD1 as seed ortholog is 97%.
Bootstrap support for Q2LZS8 as seed ortholog is 100%.

Group of orthologs #653. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 D.pseudoobscura:285

G3JH61              	100.00%		Q293F6              	100.00%
Bootstrap support for G3JH61 as seed ortholog is 100%.
Bootstrap support for Q293F6 as seed ortholog is 100%.

Group of orthologs #654. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:285 D.pseudoobscura:61

G3JCM6              	100.00%		Q29GT7              	100.00%
Bootstrap support for G3JCM6 as seed ortholog is 100%.
Bootstrap support for Q29GT7 as seed ortholog is 85%.

Group of orthologs #655. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:285

G3JTW7              	100.00%		Q291A3              	100.00%
Bootstrap support for G3JTW7 as seed ortholog is 72%.
Alternative seed ortholog is G3J721 (49 bits away from this cluster)
Bootstrap support for Q291A3 as seed ortholog is 100%.

Group of orthologs #656. Best score 285 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:285

G3JLS9              	100.00%		Q29GM0              	100.00%
Bootstrap support for G3JLS9 as seed ortholog is 97%.
Bootstrap support for Q29GM0 as seed ortholog is 100%.

Group of orthologs #657. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:191 D.pseudoobscura:97

G3J9X9              	100.00%		Q29G10              	100.00%
G3JH08              	25.98%		B5DKH3              	38.80%
G3JCD1              	13.32%		
Bootstrap support for G3J9X9 as seed ortholog is 99%.
Bootstrap support for Q29G10 as seed ortholog is 98%.

Group of orthologs #658. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 D.pseudoobscura:284

G3J301              	100.00%		B5DMG1              	100.00%
                    	       		Q296J5              	50.00%
Bootstrap support for G3J301 as seed ortholog is 100%.
Bootstrap support for B5DMG1 as seed ortholog is 100%.

Group of orthologs #659. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 D.pseudoobscura:284

G3J518              	100.00%		Q292X3              	100.00%
                    	       		I5ANQ5              	41.51%
Bootstrap support for G3J518 as seed ortholog is 100%.
Bootstrap support for Q292X3 as seed ortholog is 100%.

Group of orthologs #660. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:2 D.pseudoobscura:284

G3JHI6              	100.00%		Q28ZU1              	100.00%
Bootstrap support for G3JHI6 as seed ortholog is 50%.
Alternative seed ortholog is G3J4C6 (2 bits away from this cluster)
Bootstrap support for Q28ZU1 as seed ortholog is 100%.

Group of orthologs #661. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:284 D.pseudoobscura:284

G3J4R8              	100.00%		Q2M0Y0              	100.00%
Bootstrap support for G3J4R8 as seed ortholog is 100%.
Bootstrap support for Q2M0Y0 as seed ortholog is 100%.

Group of orthologs #662. Best score 284 bits
Score difference with first non-orthologous sequence - C.militaris:135 D.pseudoobscura:101

G3JTT5              	100.00%		Q292B2              	100.00%
Bootstrap support for G3JTT5 as seed ortholog is 99%.
Bootstrap support for Q292B2 as seed ortholog is 99%.

Group of orthologs #663. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:283 D.pseudoobscura:283

G3JGN2              	100.00%		Q29CT9              	100.00%
Bootstrap support for G3JGN2 as seed ortholog is 100%.
Bootstrap support for Q29CT9 as seed ortholog is 100%.

Group of orthologs #664. Best score 283 bits
Score difference with first non-orthologous sequence - C.militaris:283 D.pseudoobscura:283

G3JLC5              	100.00%		Q29MS7              	100.00%
Bootstrap support for G3JLC5 as seed ortholog is 100%.
Bootstrap support for Q29MS7 as seed ortholog is 100%.

Group of orthologs #665. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:282 D.pseudoobscura:282

G3JTR1              	100.00%		Q29FR6              	100.00%
                    	       		Q29F24              	70.06%
Bootstrap support for G3JTR1 as seed ortholog is 100%.
Bootstrap support for Q29FR6 as seed ortholog is 100%.

Group of orthologs #666. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:282 D.pseudoobscura:282

G3J9V4              	100.00%		Q296G2              	100.00%
Bootstrap support for G3J9V4 as seed ortholog is 100%.
Bootstrap support for Q296G2 as seed ortholog is 100%.

Group of orthologs #667. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:282 D.pseudoobscura:282

G3JC02              	100.00%		Q29DN1              	100.00%
Bootstrap support for G3JC02 as seed ortholog is 100%.
Bootstrap support for Q29DN1 as seed ortholog is 100%.

Group of orthologs #668. Best score 282 bits
Score difference with first non-orthologous sequence - C.militaris:282 D.pseudoobscura:49

G3JQQ0              	100.00%		Q29LX2              	100.00%
Bootstrap support for G3JQQ0 as seed ortholog is 100%.
Bootstrap support for Q29LX2 as seed ortholog is 44%.
Alternative seed ortholog is Q2M082 (49 bits away from this cluster)

Group of orthologs #669. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 D.pseudoobscura:281

G3JEW1              	100.00%		B5DSA7              	100.00%
Bootstrap support for G3JEW1 as seed ortholog is 100%.
Bootstrap support for B5DSA7 as seed ortholog is 100%.

Group of orthologs #670. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 D.pseudoobscura:190

G3J6M2              	100.00%		Q28X36              	100.00%
Bootstrap support for G3J6M2 as seed ortholog is 100%.
Bootstrap support for Q28X36 as seed ortholog is 100%.

Group of orthologs #671. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 D.pseudoobscura:241

G3JEL9              	100.00%		Q28YM2              	100.00%
Bootstrap support for G3JEL9 as seed ortholog is 100%.
Bootstrap support for Q28YM2 as seed ortholog is 100%.

Group of orthologs #672. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 D.pseudoobscura:175

G3JEF7              	100.00%		Q291H6              	100.00%
Bootstrap support for G3JEF7 as seed ortholog is 100%.
Bootstrap support for Q291H6 as seed ortholog is 100%.

Group of orthologs #673. Best score 281 bits
Score difference with first non-orthologous sequence - C.militaris:281 D.pseudoobscura:281

G3JTW3              	100.00%		Q295E6              	100.00%
Bootstrap support for G3JTW3 as seed ortholog is 100%.
Bootstrap support for Q295E6 as seed ortholog is 100%.

Group of orthologs #674. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 D.pseudoobscura:280

G3J4G2              	100.00%		Q2LYM6              	100.00%
Bootstrap support for G3J4G2 as seed ortholog is 100%.
Bootstrap support for Q2LYM6 as seed ortholog is 100%.

Group of orthologs #675. Best score 280 bits
Score difference with first non-orthologous sequence - C.militaris:280 D.pseudoobscura:280

G3J9F6              	100.00%		Q29KS5              	100.00%
Bootstrap support for G3J9F6 as seed ortholog is 100%.
Bootstrap support for Q29KS5 as seed ortholog is 100%.

Group of orthologs #676. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:213 D.pseudoobscura:197

G3J303              	100.00%		Q29H34              	100.00%
                    	       		Q29H33              	59.71%
Bootstrap support for G3J303 as seed ortholog is 100%.
Bootstrap support for Q29H34 as seed ortholog is 100%.

Group of orthologs #677. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 D.pseudoobscura:279

G3JB40              	100.00%		Q29DY4              	100.00%
Bootstrap support for G3JB40 as seed ortholog is 100%.
Bootstrap support for Q29DY4 as seed ortholog is 100%.

Group of orthologs #678. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:279 D.pseudoobscura:279

G3JE10              	100.00%		Q29BK7              	100.00%
Bootstrap support for G3JE10 as seed ortholog is 100%.
Bootstrap support for Q29BK7 as seed ortholog is 100%.

Group of orthologs #679. Best score 279 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:207

G3J760              	100.00%		Q29KH3              	100.00%
Bootstrap support for G3J760 as seed ortholog is 98%.
Bootstrap support for Q29KH3 as seed ortholog is 99%.

Group of orthologs #680. Best score 278 bits
Score difference with first non-orthologous sequence - C.militaris:278 D.pseudoobscura:278

G3JR21              	100.00%		B5DIQ1              	100.00%
Bootstrap support for G3JR21 as seed ortholog is 100%.
Bootstrap support for B5DIQ1 as seed ortholog is 100%.

Group of orthologs #681. Best score 278 bits
Score difference with first non-orthologous sequence - C.militaris:278 D.pseudoobscura:278

G3JL82              	100.00%		Q292H6              	100.00%
Bootstrap support for G3JL82 as seed ortholog is 100%.
Bootstrap support for Q292H6 as seed ortholog is 100%.

Group of orthologs #682. Best score 278 bits
Score difference with first non-orthologous sequence - C.militaris:18 D.pseudoobscura:86

G3JKF6              	100.00%		Q29A24              	100.00%
Bootstrap support for G3JKF6 as seed ortholog is 66%.
Alternative seed ortholog is G3JUP0 (18 bits away from this cluster)
Bootstrap support for Q29A24 as seed ortholog is 97%.

Group of orthologs #683. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:132

G3J6Z4              	100.00%		B5E1L1              	100.00%
Bootstrap support for G3J6Z4 as seed ortholog is 77%.
Bootstrap support for B5E1L1 as seed ortholog is 98%.

Group of orthologs #684. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:25 D.pseudoobscura:277

G3J886              	100.00%		Q295D1              	100.00%
Bootstrap support for G3J886 as seed ortholog is 67%.
Alternative seed ortholog is G3J533 (25 bits away from this cluster)
Bootstrap support for Q295D1 as seed ortholog is 100%.

Group of orthologs #685. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:277

G3J6I7              	100.00%		Q29C17              	100.00%
Bootstrap support for G3J6I7 as seed ortholog is 100%.
Bootstrap support for Q29C17 as seed ortholog is 100%.

Group of orthologs #686. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:277 D.pseudoobscura:277

G3JEK2              	100.00%		Q29FE1              	100.00%
Bootstrap support for G3JEK2 as seed ortholog is 100%.
Bootstrap support for Q29FE1 as seed ortholog is 100%.

Group of orthologs #687. Best score 277 bits
Score difference with first non-orthologous sequence - C.militaris:277 D.pseudoobscura:277

G3JF45              	100.00%		Q29J55              	100.00%
Bootstrap support for G3JF45 as seed ortholog is 100%.
Bootstrap support for Q29J55 as seed ortholog is 100%.

Group of orthologs #688. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:276 D.pseudoobscura:276

G3J4R3              	100.00%		Q29LW9              	100.00%
Bootstrap support for G3J4R3 as seed ortholog is 100%.
Bootstrap support for Q29LW9 as seed ortholog is 100%.

Group of orthologs #689. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:276 D.pseudoobscura:276

G3JP44              	100.00%		Q290X7              	100.00%
Bootstrap support for G3JP44 as seed ortholog is 100%.
Bootstrap support for Q290X7 as seed ortholog is 100%.

Group of orthologs #690. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:168

G3JKB6              	100.00%		Q29IC0              	100.00%
Bootstrap support for G3JKB6 as seed ortholog is 95%.
Bootstrap support for Q29IC0 as seed ortholog is 100%.

Group of orthologs #691. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:276 D.pseudoobscura:13

G3JPR5              	100.00%		Q29FF5              	100.00%
Bootstrap support for G3JPR5 as seed ortholog is 100%.
Bootstrap support for Q29FF5 as seed ortholog is 63%.
Alternative seed ortholog is Q29KB0 (13 bits away from this cluster)

Group of orthologs #692. Best score 276 bits
Score difference with first non-orthologous sequence - C.militaris:276 D.pseudoobscura:276

G3JQU0              	100.00%		Q29EE0              	100.00%
Bootstrap support for G3JQU0 as seed ortholog is 100%.
Bootstrap support for Q29EE0 as seed ortholog is 100%.

Group of orthologs #693. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 D.pseudoobscura:152

G3J3J9              	100.00%		Q28Z52              	100.00%
Bootstrap support for G3J3J9 as seed ortholog is 100%.
Bootstrap support for Q28Z52 as seed ortholog is 99%.

Group of orthologs #694. Best score 275 bits
Score difference with first non-orthologous sequence - C.militaris:275 D.pseudoobscura:275

G3JRC8              	100.00%		Q29J14              	100.00%
Bootstrap support for G3JRC8 as seed ortholog is 100%.
Bootstrap support for Q29J14 as seed ortholog is 100%.

Group of orthologs #695. Best score 274 bits
Score difference with first non-orthologous sequence - C.militaris:274 D.pseudoobscura:185

G3JBD8              	100.00%		B5DPJ4              	100.00%
Bootstrap support for G3JBD8 as seed ortholog is 100%.
Bootstrap support for B5DPJ4 as seed ortholog is 100%.

Group of orthologs #696. Best score 273 bits
Score difference with first non-orthologous sequence - C.militaris:273 D.pseudoobscura:273

G3JM71              	100.00%		B5DJP1              	100.00%
Bootstrap support for G3JM71 as seed ortholog is 100%.
Bootstrap support for B5DJP1 as seed ortholog is 100%.

Group of orthologs #697. Best score 273 bits
Score difference with first non-orthologous sequence - C.militaris:273 D.pseudoobscura:273

G3J3E9              	100.00%		Q29I16              	100.00%
Bootstrap support for G3J3E9 as seed ortholog is 100%.
Bootstrap support for Q29I16 as seed ortholog is 100%.

Group of orthologs #698. Best score 273 bits
Score difference with first non-orthologous sequence - C.militaris:273 D.pseudoobscura:273

G3JL34              	100.00%		Q29KR0              	100.00%
Bootstrap support for G3JL34 as seed ortholog is 100%.
Bootstrap support for Q29KR0 as seed ortholog is 100%.

Group of orthologs #699. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 D.pseudoobscura:272

G3J354              	100.00%		Q29CJ1              	100.00%
                    	       		Q29BW3              	40.98%
Bootstrap support for G3J354 as seed ortholog is 100%.
Bootstrap support for Q29CJ1 as seed ortholog is 100%.

Group of orthologs #700. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 D.pseudoobscura:211

G3J986              	100.00%		Q28XR8              	100.00%
Bootstrap support for G3J986 as seed ortholog is 100%.
Bootstrap support for Q28XR8 as seed ortholog is 99%.

Group of orthologs #701. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:222 D.pseudoobscura:272

G3JIA9              	100.00%		B5DZB4              	100.00%
Bootstrap support for G3JIA9 as seed ortholog is 99%.
Bootstrap support for B5DZB4 as seed ortholog is 100%.

Group of orthologs #702. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 D.pseudoobscura:272

G3JDT1              	100.00%		Q297T4              	100.00%
Bootstrap support for G3JDT1 as seed ortholog is 100%.
Bootstrap support for Q297T4 as seed ortholog is 100%.

Group of orthologs #703. Best score 272 bits
Score difference with first non-orthologous sequence - C.militaris:272 D.pseudoobscura:272

G3J6H8              	100.00%		Q29I23              	100.00%
Bootstrap support for G3J6H8 as seed ortholog is 100%.
Bootstrap support for Q29I23 as seed ortholog is 100%.

Group of orthologs #704. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:271 D.pseudoobscura:271

G3J8K4              	100.00%		Q29H73              	100.00%
                    	       		Q29E65              	53.00%
                    	       		Q29GY2              	25.91%
                    	       		Q29KJ3              	20.36%
                    	       		B5DJS9              	14.36%
Bootstrap support for G3J8K4 as seed ortholog is 100%.
Bootstrap support for Q29H73 as seed ortholog is 100%.

Group of orthologs #705. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:75

G3J727              	100.00%		B5DZ84              	100.00%
Bootstrap support for G3J727 as seed ortholog is 99%.
Bootstrap support for B5DZ84 as seed ortholog is 99%.

Group of orthologs #706. Best score 271 bits
Score difference with first non-orthologous sequence - C.militaris:271 D.pseudoobscura:14

G3JQ44              	100.00%		Q29JW2              	100.00%
Bootstrap support for G3JQ44 as seed ortholog is 100%.
Bootstrap support for Q29JW2 as seed ortholog is 65%.
Alternative seed ortholog is Q29NR1 (14 bits away from this cluster)

Group of orthologs #707. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 D.pseudoobscura:270

G3J777              	100.00%		Q28WK3              	100.00%
Bootstrap support for G3J777 as seed ortholog is 100%.
Bootstrap support for Q28WK3 as seed ortholog is 100%.

Group of orthologs #708. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:270 D.pseudoobscura:270

G3JHJ3              	100.00%		Q292P6              	100.00%
Bootstrap support for G3JHJ3 as seed ortholog is 100%.
Bootstrap support for Q292P6 as seed ortholog is 100%.

Group of orthologs #709. Best score 270 bits
Score difference with first non-orthologous sequence - C.militaris:199 D.pseudoobscura:189

G3JHK2              	100.00%		Q295W1              	100.00%
Bootstrap support for G3JHK2 as seed ortholog is 99%.
Bootstrap support for Q295W1 as seed ortholog is 99%.

Group of orthologs #710. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 D.pseudoobscura:269

G3J4B1              	100.00%		B5DVA8              	100.00%
Bootstrap support for G3J4B1 as seed ortholog is 100%.
Bootstrap support for B5DVA8 as seed ortholog is 100%.

Group of orthologs #711. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 D.pseudoobscura:118

G3JJN5              	100.00%		Q291H3              	100.00%
Bootstrap support for G3JJN5 as seed ortholog is 100%.
Bootstrap support for Q291H3 as seed ortholog is 98%.

Group of orthologs #712. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:154 D.pseudoobscura:141

G3JF99              	100.00%		Q29DB7              	100.00%
Bootstrap support for G3JF99 as seed ortholog is 100%.
Bootstrap support for Q29DB7 as seed ortholog is 100%.

Group of orthologs #713. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 D.pseudoobscura:269

G3J434              	100.00%		Q2M039              	100.00%
Bootstrap support for G3J434 as seed ortholog is 100%.
Bootstrap support for Q2M039 as seed ortholog is 100%.

Group of orthologs #714. Best score 269 bits
Score difference with first non-orthologous sequence - C.militaris:269 D.pseudoobscura:269

G3JMN1              	100.00%		Q29NI2              	100.00%
Bootstrap support for G3JMN1 as seed ortholog is 100%.
Bootstrap support for Q29NI2 as seed ortholog is 100%.

Group of orthologs #715. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 D.pseudoobscura:267

G3J311              	100.00%		B5DHM4              	100.00%
Bootstrap support for G3J311 as seed ortholog is 100%.
Bootstrap support for B5DHM4 as seed ortholog is 100%.

Group of orthologs #716. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 D.pseudoobscura:267

G3JCP6              	100.00%		B5DHY5              	100.00%
Bootstrap support for G3JCP6 as seed ortholog is 100%.
Bootstrap support for B5DHY5 as seed ortholog is 100%.

Group of orthologs #717. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 D.pseudoobscura:114

G3J5Z9              	100.00%		Q29NI0              	100.00%
Bootstrap support for G3J5Z9 as seed ortholog is 100%.
Bootstrap support for Q29NI0 as seed ortholog is 99%.

Group of orthologs #718. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:176 D.pseudoobscura:151

G3J698              	100.00%		Q29P36              	100.00%
Bootstrap support for G3J698 as seed ortholog is 99%.
Bootstrap support for Q29P36 as seed ortholog is 99%.

Group of orthologs #719. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 D.pseudoobscura:267

G3JP96              	100.00%		Q295L4              	100.00%
Bootstrap support for G3JP96 as seed ortholog is 100%.
Bootstrap support for Q295L4 as seed ortholog is 100%.

Group of orthologs #720. Best score 267 bits
Score difference with first non-orthologous sequence - C.militaris:267 D.pseudoobscura:79

G3JNS5              	100.00%		Q29ES8              	100.00%
Bootstrap support for G3JNS5 as seed ortholog is 100%.
Bootstrap support for Q29ES8 as seed ortholog is 99%.

Group of orthologs #721. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 D.pseudoobscura:266

G3J6N9              	100.00%		Q28ZG2              	100.00%
Bootstrap support for G3J6N9 as seed ortholog is 100%.
Bootstrap support for Q28ZG2 as seed ortholog is 100%.

Group of orthologs #722. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 D.pseudoobscura:266

G3JG20              	100.00%		Q297C2              	100.00%
Bootstrap support for G3JG20 as seed ortholog is 100%.
Bootstrap support for Q297C2 as seed ortholog is 100%.

Group of orthologs #723. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 D.pseudoobscura:167

G3JPX6              	100.00%		Q290A8              	100.00%
Bootstrap support for G3JPX6 as seed ortholog is 100%.
Bootstrap support for Q290A8 as seed ortholog is 100%.

Group of orthologs #724. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:215 D.pseudoobscura:188

G3JL05              	100.00%		Q2M0N1              	100.00%
Bootstrap support for G3JL05 as seed ortholog is 100%.
Bootstrap support for Q2M0N1 as seed ortholog is 99%.

Group of orthologs #725. Best score 266 bits
Score difference with first non-orthologous sequence - C.militaris:266 D.pseudoobscura:116

G3JLF8              	100.00%		Q2M1A2              	100.00%
Bootstrap support for G3JLF8 as seed ortholog is 100%.
Bootstrap support for Q2M1A2 as seed ortholog is 99%.

Group of orthologs #726. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:78

G3J999              	100.00%		Q28XK4              	100.00%
                    	       		Q291Z9              	24.10%
Bootstrap support for G3J999 as seed ortholog is 100%.
Bootstrap support for Q28XK4 as seed ortholog is 99%.

Group of orthologs #727. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:265

G3J7J4              	100.00%		B5DHQ5              	100.00%
Bootstrap support for G3J7J4 as seed ortholog is 100%.
Bootstrap support for B5DHQ5 as seed ortholog is 100%.

Group of orthologs #728. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:265

G3JMF9              	100.00%		Q28YS1              	100.00%
Bootstrap support for G3JMF9 as seed ortholog is 100%.
Bootstrap support for Q28YS1 as seed ortholog is 100%.

Group of orthologs #729. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:265

G3JJY3              	100.00%		Q299C9              	100.00%
Bootstrap support for G3JJY3 as seed ortholog is 100%.
Bootstrap support for Q299C9 as seed ortholog is 100%.

Group of orthologs #730. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:265

G3JIT9              	100.00%		Q29DT6              	100.00%
Bootstrap support for G3JIT9 as seed ortholog is 100%.
Bootstrap support for Q29DT6 as seed ortholog is 100%.

Group of orthologs #731. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:265

G3JTP1              	100.00%		Q297P1              	100.00%
Bootstrap support for G3JTP1 as seed ortholog is 88%.
Bootstrap support for Q297P1 as seed ortholog is 100%.

Group of orthologs #732. Best score 265 bits
Score difference with first non-orthologous sequence - C.militaris:265 D.pseudoobscura:265

G3JU99              	100.00%		Q29EI4              	100.00%
Bootstrap support for G3JU99 as seed ortholog is 100%.
Bootstrap support for Q29EI4 as seed ortholog is 100%.

Group of orthologs #733. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 D.pseudoobscura:264

G3JDV4              	100.00%		Q29D64              	100.00%
G3J971              	52.19%		
Bootstrap support for G3JDV4 as seed ortholog is 100%.
Bootstrap support for Q29D64 as seed ortholog is 100%.

Group of orthologs #734. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:39

G3J6N5              	100.00%		B5DNL9              	100.00%
Bootstrap support for G3J6N5 as seed ortholog is 99%.
Bootstrap support for B5DNL9 as seed ortholog is 97%.

Group of orthologs #735. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:186

G3J5A6              	100.00%		Q28XY6              	100.00%
Bootstrap support for G3J5A6 as seed ortholog is 100%.
Bootstrap support for Q28XY6 as seed ortholog is 100%.

Group of orthologs #736. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 D.pseudoobscura:140

G3J4C0              	100.00%		Q29BC6              	100.00%
Bootstrap support for G3J4C0 as seed ortholog is 100%.
Bootstrap support for Q29BC6 as seed ortholog is 99%.

Group of orthologs #737. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 D.pseudoobscura:264

G3JCD3              	100.00%		Q29E27              	100.00%
Bootstrap support for G3JCD3 as seed ortholog is 100%.
Bootstrap support for Q29E27 as seed ortholog is 100%.

Group of orthologs #738. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 D.pseudoobscura:264

G3JLC6              	100.00%		Q298M8              	100.00%
Bootstrap support for G3JLC6 as seed ortholog is 100%.
Bootstrap support for Q298M8 as seed ortholog is 100%.

Group of orthologs #739. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:264 D.pseudoobscura:264

G3J5P4              	100.00%		Q2M0L5              	100.00%
Bootstrap support for G3J5P4 as seed ortholog is 100%.
Bootstrap support for Q2M0L5 as seed ortholog is 100%.

Group of orthologs #740. Best score 264 bits
Score difference with first non-orthologous sequence - C.militaris:209 D.pseudoobscura:73

G3JCQ6              	100.00%		Q29P53              	100.00%
Bootstrap support for G3JCQ6 as seed ortholog is 100%.
Bootstrap support for Q29P53 as seed ortholog is 97%.

Group of orthologs #741. Best score 263 bits
Score difference with first non-orthologous sequence - C.militaris:36 D.pseudoobscura:83

G3JJT6              	100.00%		Q293D3              	100.00%
                    	       		Q29GH0              	34.42%
                    	       		B5DWW5              	24.19%
Bootstrap support for G3JJT6 as seed ortholog is 78%.
Bootstrap support for Q293D3 as seed ortholog is 96%.

Group of orthologs #742. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 D.pseudoobscura:262

G3J3F5              	100.00%		Q29DM2              	100.00%
Bootstrap support for G3J3F5 as seed ortholog is 100%.
Bootstrap support for Q29DM2 as seed ortholog is 100%.

Group of orthologs #743. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:201 D.pseudoobscura:262

G3JIP3              	100.00%		Q298C7              	100.00%
Bootstrap support for G3JIP3 as seed ortholog is 100%.
Bootstrap support for Q298C7 as seed ortholog is 100%.

Group of orthologs #744. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 D.pseudoobscura:262

G3JGB9              	100.00%		Q29GW7              	100.00%
Bootstrap support for G3JGB9 as seed ortholog is 100%.
Bootstrap support for Q29GW7 as seed ortholog is 100%.

Group of orthologs #745. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 D.pseudoobscura:262

G3JGQ4              	100.00%		Q29MS6              	100.00%
Bootstrap support for G3JGQ4 as seed ortholog is 100%.
Bootstrap support for Q29MS6 as seed ortholog is 100%.

Group of orthologs #746. Best score 262 bits
Score difference with first non-orthologous sequence - C.militaris:262 D.pseudoobscura:262

G3JJV3              	100.00%		Q29N57              	100.00%
Bootstrap support for G3JJV3 as seed ortholog is 100%.
Bootstrap support for Q29N57 as seed ortholog is 100%.

Group of orthologs #747. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 D.pseudoobscura:165

G3J5B6              	100.00%		Q29GE7              	100.00%
                    	       		B5DHA3              	74.24%
                    	       		B5DZ68              	14.41%
Bootstrap support for G3J5B6 as seed ortholog is 100%.
Bootstrap support for Q29GE7 as seed ortholog is 100%.

Group of orthologs #748. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 D.pseudoobscura:261

G3J751              	100.00%		Q294L6              	100.00%
Bootstrap support for G3J751 as seed ortholog is 100%.
Bootstrap support for Q294L6 as seed ortholog is 100%.

Group of orthologs #749. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 D.pseudoobscura:261

G3JN92              	100.00%		Q295Q5              	100.00%
Bootstrap support for G3JN92 as seed ortholog is 100%.
Bootstrap support for Q295Q5 as seed ortholog is 100%.

Group of orthologs #750. Best score 261 bits
Score difference with first non-orthologous sequence - C.militaris:261 D.pseudoobscura:261

G3JNG2              	100.00%		Q296Q6              	100.00%
Bootstrap support for G3JNG2 as seed ortholog is 100%.
Bootstrap support for Q296Q6 as seed ortholog is 100%.

Group of orthologs #751. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:174

G3JTL5              	100.00%		B5DZZ7              	100.00%
G3J8E3              	6.41%		
Bootstrap support for G3JTL5 as seed ortholog is 99%.
Bootstrap support for B5DZZ7 as seed ortholog is 99%.

Group of orthologs #752. Best score 260 bits
Score difference with first non-orthologous sequence - C.militaris:260 D.pseudoobscura:260

G3JGP9              	100.00%		Q29L51              	100.00%
Bootstrap support for G3JGP9 as seed ortholog is 100%.
Bootstrap support for Q29L51 as seed ortholog is 100%.

Group of orthologs #753. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 D.pseudoobscura:184

G3J8M9              	100.00%		Q29GJ0              	100.00%
                    	       		Q291Z5              	28.64%
Bootstrap support for G3J8M9 as seed ortholog is 100%.
Bootstrap support for Q29GJ0 as seed ortholog is 100%.

Group of orthologs #754. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 D.pseudoobscura:259

G3JPG4              	100.00%		Q28XF9              	100.00%
Bootstrap support for G3JPG4 as seed ortholog is 100%.
Bootstrap support for Q28XF9 as seed ortholog is 100%.

Group of orthologs #755. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 D.pseudoobscura:259

G3J8G9              	100.00%		Q29KS9              	100.00%
Bootstrap support for G3J8G9 as seed ortholog is 100%.
Bootstrap support for Q29KS9 as seed ortholog is 100%.

Group of orthologs #756. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 D.pseudoobscura:259

G3JMH4              	100.00%		Q29NI9              	100.00%
Bootstrap support for G3JMH4 as seed ortholog is 100%.
Bootstrap support for Q29NI9 as seed ortholog is 100%.

Group of orthologs #757. Best score 259 bits
Score difference with first non-orthologous sequence - C.militaris:259 D.pseudoobscura:259

G3JLM8              	100.00%		Q2LYX0              	100.00%
Bootstrap support for G3JLM8 as seed ortholog is 100%.
Bootstrap support for Q2LYX0 as seed ortholog is 100%.

Group of orthologs #758. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 D.pseudoobscura:257

G3JSN0              	100.00%		Q2LZ33              	100.00%
G3JRT7              	33.96%		
G3J5P5              	10.91%		
Bootstrap support for G3JSN0 as seed ortholog is 100%.
Bootstrap support for Q2LZ33 as seed ortholog is 100%.

Group of orthologs #759. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 D.pseudoobscura:257

G3J2I8              	100.00%		Q28ZC5              	100.00%
                    	       		Q28ZC4              	28.36%
Bootstrap support for G3J2I8 as seed ortholog is 100%.
Bootstrap support for Q28ZC5 as seed ortholog is 100%.

Group of orthologs #760. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:147 D.pseudoobscura:45

G3JDC0              	100.00%		B5DZG9              	100.00%
Bootstrap support for G3JDC0 as seed ortholog is 100%.
Bootstrap support for B5DZG9 as seed ortholog is 99%.

Group of orthologs #761. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:194 D.pseudoobscura:257

G3J3U5              	100.00%		Q298I7              	100.00%
Bootstrap support for G3J3U5 as seed ortholog is 99%.
Bootstrap support for Q298I7 as seed ortholog is 100%.

Group of orthologs #762. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 D.pseudoobscura:257

G3JJ69              	100.00%		B5DUR4              	100.00%
Bootstrap support for G3JJ69 as seed ortholog is 100%.
Bootstrap support for B5DUR4 as seed ortholog is 100%.

Group of orthologs #763. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 D.pseudoobscura:257

G3JPQ7              	100.00%		B5DVW4              	100.00%
Bootstrap support for G3JPQ7 as seed ortholog is 100%.
Bootstrap support for B5DVW4 as seed ortholog is 100%.

Group of orthologs #764. Best score 257 bits
Score difference with first non-orthologous sequence - C.militaris:257 D.pseudoobscura:257

G3JHU4              	100.00%		Q28YS3              	100.00%
Bootstrap support for G3JHU4 as seed ortholog is 100%.
Bootstrap support for Q28YS3 as seed ortholog is 100%.

Group of orthologs #765. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:256 D.pseudoobscura:1

G3JCP7              	100.00%		B5DK44              	100.00%
Bootstrap support for G3JCP7 as seed ortholog is 100%.
Bootstrap support for B5DK44 as seed ortholog is 47%.
Alternative seed ortholog is Q28XI5 (1 bits away from this cluster)

Group of orthologs #766. Best score 256 bits
Score difference with first non-orthologous sequence - C.militaris:256 D.pseudoobscura:256

G3JDQ0              	100.00%		Q28XI3              	100.00%
Bootstrap support for G3JDQ0 as seed ortholog is 100%.
Bootstrap support for Q28XI3 as seed ortholog is 100%.

Group of orthologs #767. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:255

G3J8I6              	100.00%		Q29AD1              	100.00%
                    	       		Q29H89              	100.00%
                    	       		B5DQR8              	35.26%
                    	       		Q29NJ9              	26.74%
                    	       		B5DYS6              	21.49%
Bootstrap support for G3J8I6 as seed ortholog is 99%.
Bootstrap support for Q29AD1 as seed ortholog is 100%.
Bootstrap support for Q29H89 as seed ortholog is 100%.

Group of orthologs #768. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:83

G3J4N5              	100.00%		B5DVF8              	100.00%
Bootstrap support for G3J4N5 as seed ortholog is 100%.
Bootstrap support for B5DVF8 as seed ortholog is 99%.

Group of orthologs #769. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 D.pseudoobscura:255

G3J9F4              	100.00%		Q28Y31              	100.00%
Bootstrap support for G3J9F4 as seed ortholog is 100%.
Bootstrap support for Q28Y31 as seed ortholog is 100%.

Group of orthologs #770. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 D.pseudoobscura:132

G3J719              	100.00%		Q29B24              	100.00%
Bootstrap support for G3J719 as seed ortholog is 100%.
Bootstrap support for Q29B24 as seed ortholog is 99%.

Group of orthologs #771. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 D.pseudoobscura:255

G3JAV4              	100.00%		Q29EV9              	100.00%
Bootstrap support for G3JAV4 as seed ortholog is 100%.
Bootstrap support for Q29EV9 as seed ortholog is 100%.

Group of orthologs #772. Best score 255 bits
Score difference with first non-orthologous sequence - C.militaris:255 D.pseudoobscura:255

G3JPW2              	100.00%		Q29D51              	100.00%
Bootstrap support for G3JPW2 as seed ortholog is 100%.
Bootstrap support for Q29D51 as seed ortholog is 100%.

Group of orthologs #773. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:68

G3J4I1              	100.00%		Q28XA0              	100.00%
Bootstrap support for G3J4I1 as seed ortholog is 98%.
Bootstrap support for Q28XA0 as seed ortholog is 93%.

Group of orthologs #774. Best score 254 bits
Score difference with first non-orthologous sequence - C.militaris:254 D.pseudoobscura:254

G3JHA2              	100.00%		Q296V4              	100.00%
Bootstrap support for G3JHA2 as seed ortholog is 100%.
Bootstrap support for Q296V4 as seed ortholog is 100%.

Group of orthologs #775. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:211 D.pseudoobscura:253

G3J3N3              	100.00%		Q29GG8              	100.00%
Bootstrap support for G3J3N3 as seed ortholog is 100%.
Bootstrap support for Q29GG8 as seed ortholog is 100%.

Group of orthologs #776. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 D.pseudoobscura:253

G3JAE9              	100.00%		Q29M45              	100.00%
Bootstrap support for G3JAE9 as seed ortholog is 100%.
Bootstrap support for Q29M45 as seed ortholog is 100%.

Group of orthologs #777. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 D.pseudoobscura:253

G3JNV2              	100.00%		Q29BY2              	100.00%
Bootstrap support for G3JNV2 as seed ortholog is 100%.
Bootstrap support for Q29BY2 as seed ortholog is 100%.

Group of orthologs #778. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 D.pseudoobscura:253

G3JSN4              	100.00%		Q29FM7              	100.00%
Bootstrap support for G3JSN4 as seed ortholog is 100%.
Bootstrap support for Q29FM7 as seed ortholog is 100%.

Group of orthologs #779. Best score 253 bits
Score difference with first non-orthologous sequence - C.militaris:253 D.pseudoobscura:253

G3JPP7              	100.00%		Q29L74              	100.00%
Bootstrap support for G3JPP7 as seed ortholog is 100%.
Bootstrap support for Q29L74 as seed ortholog is 100%.

Group of orthologs #780. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 D.pseudoobscura:252

G3JCG4              	100.00%		B5DR47              	100.00%
                    	       		B5DVZ7              	50.35%
Bootstrap support for G3JCG4 as seed ortholog is 100%.
Bootstrap support for B5DR47 as seed ortholog is 100%.

Group of orthologs #781. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:31 D.pseudoobscura:252

G3JGD7              	100.00%		Q295C7              	100.00%
                    	       		B5DVN7              	29.34%
Bootstrap support for G3JGD7 as seed ortholog is 70%.
Alternative seed ortholog is G3J7P0 (31 bits away from this cluster)
Bootstrap support for Q295C7 as seed ortholog is 100%.

Group of orthologs #782. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 D.pseudoobscura:252

G3JU81              	100.00%		Q299W5              	100.00%
                    	       		B5DUQ5              	78.00%
Bootstrap support for G3JU81 as seed ortholog is 100%.
Bootstrap support for Q299W5 as seed ortholog is 100%.

Group of orthologs #783. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 D.pseudoobscura:252

G3J5D3              	100.00%		Q29I74              	100.00%
Bootstrap support for G3J5D3 as seed ortholog is 100%.
Bootstrap support for Q29I74 as seed ortholog is 100%.

Group of orthologs #784. Best score 252 bits
Score difference with first non-orthologous sequence - C.militaris:252 D.pseudoobscura:252

G3JD38              	100.00%		Q29JI1              	100.00%
Bootstrap support for G3JD38 as seed ortholog is 100%.
Bootstrap support for Q29JI1 as seed ortholog is 100%.

Group of orthologs #785. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 D.pseudoobscura:202

G3J5Z8              	100.00%		B5DKT4              	100.00%
                    	       		B5DKT3              	89.13%
                    	       		B5DRY2              	65.22%
                    	       		B5DJ85              	23.91%
Bootstrap support for G3J5Z8 as seed ortholog is 100%.
Bootstrap support for B5DKT4 as seed ortholog is 100%.

Group of orthologs #786. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:251

G3JII2              	100.00%		Q29BT3              	100.00%
Bootstrap support for G3JII2 as seed ortholog is 99%.
Bootstrap support for Q29BT3 as seed ortholog is 100%.

Group of orthologs #787. Best score 251 bits
Score difference with first non-orthologous sequence - C.militaris:251 D.pseudoobscura:251

G3JEH9              	100.00%		Q2M1D2              	100.00%
Bootstrap support for G3JEH9 as seed ortholog is 100%.
Bootstrap support for Q2M1D2 as seed ortholog is 100%.

Group of orthologs #788. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:12 D.pseudoobscura:122

G3J620              	100.00%		Q29IR9              	100.00%
G3J455              	14.57%		
Bootstrap support for G3J620 as seed ortholog is 60%.
Alternative seed ortholog is G3JNE1 (12 bits away from this cluster)
Bootstrap support for Q29IR9 as seed ortholog is 99%.

Group of orthologs #789. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 D.pseudoobscura:184

G3J4M0              	100.00%		Q28ZN7              	100.00%
Bootstrap support for G3J4M0 as seed ortholog is 100%.
Bootstrap support for Q28ZN7 as seed ortholog is 100%.

Group of orthologs #790. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:11 D.pseudoobscura:102

G3J4D8              	100.00%		Q29CP9              	100.00%
Bootstrap support for G3J4D8 as seed ortholog is 55%.
Alternative seed ortholog is G3J991 (11 bits away from this cluster)
Bootstrap support for Q29CP9 as seed ortholog is 99%.

Group of orthologs #791. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:250 D.pseudoobscura:250

G3J9G1              	100.00%		Q29BE1              	100.00%
Bootstrap support for G3J9G1 as seed ortholog is 100%.
Bootstrap support for Q29BE1 as seed ortholog is 100%.

Group of orthologs #792. Best score 250 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:250

G3JFC3              	100.00%		Q297P0              	100.00%
Bootstrap support for G3JFC3 as seed ortholog is 84%.
Bootstrap support for Q297P0 as seed ortholog is 100%.

Group of orthologs #793. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 D.pseudoobscura:157

G3JGG6              	100.00%		Q290P0              	100.00%
G3J656              	8.12%		
Bootstrap support for G3JGG6 as seed ortholog is 100%.
Bootstrap support for Q290P0 as seed ortholog is 99%.

Group of orthologs #794. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 D.pseudoobscura:248

G3JEF8              	100.00%		Q29G36              	100.00%
                    	       		B5DQ06              	36.38%
Bootstrap support for G3JEF8 as seed ortholog is 100%.
Bootstrap support for Q29G36 as seed ortholog is 100%.

Group of orthologs #795. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:248

G3J821              	100.00%		Q29NI8              	100.00%
                    	       		B5DHI3              	59.43%
Bootstrap support for G3J821 as seed ortholog is 99%.
Bootstrap support for Q29NI8 as seed ortholog is 100%.

Group of orthologs #796. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:179 D.pseudoobscura:248

G3JAC3              	100.00%		B5E0E2              	100.00%
Bootstrap support for G3JAC3 as seed ortholog is 99%.
Bootstrap support for B5E0E2 as seed ortholog is 100%.

Group of orthologs #797. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 D.pseudoobscura:248

G3JEV1              	100.00%		I5APJ0              	100.00%
Bootstrap support for G3JEV1 as seed ortholog is 100%.
Bootstrap support for I5APJ0 as seed ortholog is 100%.

Group of orthologs #798. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 D.pseudoobscura:248

G3JI69              	100.00%		Q29C61              	100.00%
Bootstrap support for G3JI69 as seed ortholog is 100%.
Bootstrap support for Q29C61 as seed ortholog is 100%.

Group of orthologs #799. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 D.pseudoobscura:248

G3J8Q8              	100.00%		Q29NU4              	100.00%
Bootstrap support for G3J8Q8 as seed ortholog is 100%.
Bootstrap support for Q29NU4 as seed ortholog is 100%.

Group of orthologs #800. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:184 D.pseudoobscura:248

G3JST8              	100.00%		Q295B7              	100.00%
Bootstrap support for G3JST8 as seed ortholog is 99%.
Bootstrap support for Q295B7 as seed ortholog is 100%.

Group of orthologs #801. Best score 248 bits
Score difference with first non-orthologous sequence - C.militaris:248 D.pseudoobscura:248

G3JPU6              	100.00%		Q29L01              	100.00%
Bootstrap support for G3JPU6 as seed ortholog is 100%.
Bootstrap support for Q29L01 as seed ortholog is 100%.

Group of orthologs #802. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:247 D.pseudoobscura:30

G3JEP1              	100.00%		Q29E44              	100.00%
Bootstrap support for G3JEP1 as seed ortholog is 100%.
Bootstrap support for Q29E44 as seed ortholog is 69%.
Alternative seed ortholog is Q28XI5 (30 bits away from this cluster)

Group of orthologs #803. Best score 247 bits
Score difference with first non-orthologous sequence - C.militaris:247 D.pseudoobscura:247

G3JPV6              	100.00%		Q29I21              	100.00%
Bootstrap support for G3JPV6 as seed ortholog is 100%.
Bootstrap support for Q29I21 as seed ortholog is 100%.

Group of orthologs #804. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 D.pseudoobscura:246

G3J4N4              	100.00%		Q291S3              	100.00%
G3JNR8              	7.38%		
Bootstrap support for G3J4N4 as seed ortholog is 100%.
Bootstrap support for Q291S3 as seed ortholog is 100%.

Group of orthologs #805. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 D.pseudoobscura:82

G3J2Q8              	100.00%		B5E0J9              	100.00%
Bootstrap support for G3J2Q8 as seed ortholog is 100%.
Bootstrap support for B5E0J9 as seed ortholog is 99%.

Group of orthologs #806. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 D.pseudoobscura:246

G3JDL8              	100.00%		Q29GW0              	100.00%
Bootstrap support for G3JDL8 as seed ortholog is 100%.
Bootstrap support for Q29GW0 as seed ortholog is 100%.

Group of orthologs #807. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:141

G3JGG8              	100.00%		Q29GF7              	100.00%
Bootstrap support for G3JGG8 as seed ortholog is 99%.
Bootstrap support for Q29GF7 as seed ortholog is 100%.

Group of orthologs #808. Best score 246 bits
Score difference with first non-orthologous sequence - C.militaris:246 D.pseudoobscura:246

G3JM88              	100.00%		Q29MC1              	100.00%
Bootstrap support for G3JM88 as seed ortholog is 100%.
Bootstrap support for Q29MC1 as seed ortholog is 100%.

Group of orthologs #809. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:245

G3JLL6              	100.00%		B5DS14              	100.00%
Bootstrap support for G3JLL6 as seed ortholog is 99%.
Bootstrap support for B5DS14 as seed ortholog is 100%.

Group of orthologs #810. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 D.pseudoobscura:245

G3JH67              	100.00%		Q28YI7              	100.00%
Bootstrap support for G3JH67 as seed ortholog is 100%.
Bootstrap support for Q28YI7 as seed ortholog is 100%.

Group of orthologs #811. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 D.pseudoobscura:245

G3JR11              	100.00%		Q29A77              	100.00%
Bootstrap support for G3JR11 as seed ortholog is 100%.
Bootstrap support for Q29A77 as seed ortholog is 100%.

Group of orthologs #812. Best score 245 bits
Score difference with first non-orthologous sequence - C.militaris:245 D.pseudoobscura:245

G3JJY8              	100.00%		Q29P66              	100.00%
Bootstrap support for G3JJY8 as seed ortholog is 100%.
Bootstrap support for Q29P66 as seed ortholog is 100%.

Group of orthologs #813. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:244 D.pseudoobscura:244

G3J773              	100.00%		Q28Z21              	100.00%
Bootstrap support for G3J773 as seed ortholog is 100%.
Bootstrap support for Q28Z21 as seed ortholog is 100%.

Group of orthologs #814. Best score 244 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:75

G3JV31              	100.00%		B5DRF0              	100.00%
Bootstrap support for G3JV31 as seed ortholog is 93%.
Bootstrap support for B5DRF0 as seed ortholog is 95%.

Group of orthologs #815. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 D.pseudoobscura:111

G3JLH8              	100.00%		Q2M0V5              	100.00%
                    	       		B5DHT6              	79.65%
                    	       		B5DID3              	28.12%
Bootstrap support for G3JLH8 as seed ortholog is 100%.
Bootstrap support for Q2M0V5 as seed ortholog is 99%.

Group of orthologs #816. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:243

G3J4T2              	100.00%		Q29BL7              	100.00%
                    	       		I5APK4              	21.52%
Bootstrap support for G3J4T2 as seed ortholog is 100%.
Bootstrap support for Q29BL7 as seed ortholog is 100%.

Group of orthologs #817. Best score 243 bits
Score difference with first non-orthologous sequence - C.militaris:243 D.pseudoobscura:243

G3JGP8              	100.00%		Q298Z1              	100.00%
                    	       		B5DPB9              	6.02%
Bootstrap support for G3JGP8 as seed ortholog is 100%.
Bootstrap support for Q298Z1 as seed ortholog is 100%.

Group of orthologs #818. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:242

G3JE29              	100.00%		Q292P4              	100.00%
Bootstrap support for G3JE29 as seed ortholog is 98%.
Bootstrap support for Q292P4 as seed ortholog is 100%.

Group of orthologs #819. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:4 D.pseudoobscura:242

G3JJV5              	100.00%		Q28YL3              	100.00%
Bootstrap support for G3JJV5 as seed ortholog is 53%.
Alternative seed ortholog is G3J881 (4 bits away from this cluster)
Bootstrap support for Q28YL3 as seed ortholog is 100%.

Group of orthologs #820. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 D.pseudoobscura:242

G3J334              	100.00%		Q2M0P7              	100.00%
Bootstrap support for G3J334 as seed ortholog is 100%.
Bootstrap support for Q2M0P7 as seed ortholog is 100%.

Group of orthologs #821. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 D.pseudoobscura:242

G3JBF3              	100.00%		Q29NT3              	100.00%
Bootstrap support for G3JBF3 as seed ortholog is 100%.
Bootstrap support for Q29NT3 as seed ortholog is 100%.

Group of orthologs #822. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 D.pseudoobscura:242

G3JN57              	100.00%		Q29IG6              	100.00%
Bootstrap support for G3JN57 as seed ortholog is 100%.
Bootstrap support for Q29IG6 as seed ortholog is 100%.

Group of orthologs #823. Best score 242 bits
Score difference with first non-orthologous sequence - C.militaris:242 D.pseudoobscura:242

G3JRR5              	100.00%		Q29K24              	100.00%
Bootstrap support for G3JRR5 as seed ortholog is 100%.
Bootstrap support for Q29K24 as seed ortholog is 100%.

Group of orthologs #824. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:241 D.pseudoobscura:73

G3JD57              	100.00%		Q29DZ8              	100.00%
Bootstrap support for G3JD57 as seed ortholog is 100%.
Bootstrap support for Q29DZ8 as seed ortholog is 98%.

Group of orthologs #825. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:241 D.pseudoobscura:172

G3J4R5              	100.00%		Q2LYK5              	100.00%
Bootstrap support for G3J4R5 as seed ortholog is 100%.
Bootstrap support for Q2LYK5 as seed ortholog is 99%.

Group of orthologs #826. Best score 241 bits
Score difference with first non-orthologous sequence - C.militaris:241 D.pseudoobscura:241

G3JCF6              	100.00%		Q29I64              	100.00%
Bootstrap support for G3JCF6 as seed ortholog is 100%.
Bootstrap support for Q29I64 as seed ortholog is 100%.

Group of orthologs #827. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 D.pseudoobscura:240

G3J9E8              	100.00%		Q28XA8              	100.00%
Bootstrap support for G3J9E8 as seed ortholog is 100%.
Bootstrap support for Q28XA8 as seed ortholog is 100%.

Group of orthologs #828. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:240

G3J5I2              	100.00%		Q29BK3              	100.00%
Bootstrap support for G3J5I2 as seed ortholog is 87%.
Bootstrap support for Q29BK3 as seed ortholog is 100%.

Group of orthologs #829. Best score 240 bits
Score difference with first non-orthologous sequence - C.militaris:240 D.pseudoobscura:240

G3JR02              	100.00%		Q297S2              	100.00%
Bootstrap support for G3JR02 as seed ortholog is 100%.
Bootstrap support for Q297S2 as seed ortholog is 100%.

Group of orthologs #830. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:147

G3JLH2              	100.00%		Q294H4              	100.00%
                    	       		B5DJQ5              	7.61%
Bootstrap support for G3JLH2 as seed ortholog is 100%.
Bootstrap support for Q294H4 as seed ortholog is 100%.

Group of orthologs #831. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3J2M9              	100.00%		Q291V1              	100.00%
Bootstrap support for G3J2M9 as seed ortholog is 100%.
Bootstrap support for Q291V1 as seed ortholog is 100%.

Group of orthologs #832. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3JBR3              	100.00%		Q28XI0              	100.00%
Bootstrap support for G3JBR3 as seed ortholog is 100%.
Bootstrap support for Q28XI0 as seed ortholog is 100%.

Group of orthologs #833. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3JUT6              	100.00%		B5DJT8              	100.00%
Bootstrap support for G3JUT6 as seed ortholog is 100%.
Bootstrap support for B5DJT8 as seed ortholog is 100%.

Group of orthologs #834. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:150

G3J3T4              	100.00%		Q29AF9              	100.00%
Bootstrap support for G3J3T4 as seed ortholog is 99%.
Bootstrap support for Q29AF9 as seed ortholog is 99%.

Group of orthologs #835. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3JHE1              	100.00%		Q28ZI6              	100.00%
Bootstrap support for G3JHE1 as seed ortholog is 100%.
Bootstrap support for Q28ZI6 as seed ortholog is 100%.

Group of orthologs #836. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3J7T0              	100.00%		Q29EX2              	100.00%
Bootstrap support for G3J7T0 as seed ortholog is 100%.
Bootstrap support for Q29EX2 as seed ortholog is 100%.

Group of orthologs #837. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:107

G3JNX2              	100.00%		Q28YL4              	100.00%
Bootstrap support for G3JNX2 as seed ortholog is 100%.
Bootstrap support for Q28YL4 as seed ortholog is 99%.

Group of orthologs #838. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3J409              	100.00%		Q2M0I6              	100.00%
Bootstrap support for G3J409 as seed ortholog is 100%.
Bootstrap support for Q2M0I6 as seed ortholog is 100%.

Group of orthologs #839. Best score 239 bits
Score difference with first non-orthologous sequence - C.militaris:239 D.pseudoobscura:239

G3J917              	100.00%		Q29NX1              	100.00%
Bootstrap support for G3J917 as seed ortholog is 100%.
Bootstrap support for Q29NX1 as seed ortholog is 100%.

Group of orthologs #840. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:177 D.pseudoobscura:105

G3JA92              	100.00%		Q29FM5              	100.00%
Bootstrap support for G3JA92 as seed ortholog is 99%.
Bootstrap support for Q29FM5 as seed ortholog is 95%.

Group of orthologs #841. Best score 238 bits
Score difference with first non-orthologous sequence - C.militaris:238 D.pseudoobscura:238

G3JCH4              	100.00%		Q2LZ44              	100.00%
Bootstrap support for G3JCH4 as seed ortholog is 100%.
Bootstrap support for Q2LZ44 as seed ortholog is 100%.

Group of orthologs #842. Best score 237 bits
Score difference with first non-orthologous sequence - C.militaris:237 D.pseudoobscura:237

G3JDA2              	100.00%		Q28ZZ6              	100.00%
Bootstrap support for G3JDA2 as seed ortholog is 100%.
Bootstrap support for Q28ZZ6 as seed ortholog is 100%.

Group of orthologs #843. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 D.pseudoobscura:129

G3JGM5              	100.00%		Q293T6              	100.00%
                    	       		B5DUI0              	58.72%
                    	       		Q297I1              	9.09%
Bootstrap support for G3JGM5 as seed ortholog is 100%.
Bootstrap support for Q293T6 as seed ortholog is 99%.

Group of orthologs #844. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:182 D.pseudoobscura:98

G3JE14              	100.00%		B5DWZ6              	100.00%
Bootstrap support for G3JE14 as seed ortholog is 99%.
Bootstrap support for B5DWZ6 as seed ortholog is 99%.

Group of orthologs #845. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 D.pseudoobscura:100

G3JFK0              	100.00%		Q29IB2              	100.00%
Bootstrap support for G3JFK0 as seed ortholog is 100%.
Bootstrap support for Q29IB2 as seed ortholog is 98%.

Group of orthologs #846. Best score 236 bits
Score difference with first non-orthologous sequence - C.militaris:236 D.pseudoobscura:236

G3JRK5              	100.00%		Q29E37              	100.00%
Bootstrap support for G3JRK5 as seed ortholog is 100%.
Bootstrap support for Q29E37 as seed ortholog is 100%.

Group of orthologs #847. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 D.pseudoobscura:125

G3JCK6              	100.00%		Q28WU3              	100.00%
G3J9I2              	25.71%		Q29C37              	6.73%
Bootstrap support for G3JCK6 as seed ortholog is 100%.
Bootstrap support for Q28WU3 as seed ortholog is 98%.

Group of orthologs #848. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:235

G3JGE5              	100.00%		B5DNH4              	100.00%
G3JA36              	6.96%		
Bootstrap support for G3JGE5 as seed ortholog is 82%.
Bootstrap support for B5DNH4 as seed ortholog is 100%.

Group of orthologs #849. Best score 235 bits
Score difference with first non-orthologous sequence - C.militaris:235 D.pseudoobscura:235

G3J560              	100.00%		B5DQN8              	100.00%
Bootstrap support for G3J560 as seed ortholog is 100%.
Bootstrap support for B5DQN8 as seed ortholog is 100%.

Group of orthologs #850. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 D.pseudoobscura:109

G3J3Q3              	100.00%		Q28YM9              	100.00%
                    	       		Q29FR0              	69.79%
Bootstrap support for G3J3Q3 as seed ortholog is 100%.
Bootstrap support for Q28YM9 as seed ortholog is 99%.

Group of orthologs #851. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 D.pseudoobscura:234

G3JMR9              	100.00%		B5DPH9              	100.00%
Bootstrap support for G3JMR9 as seed ortholog is 100%.
Bootstrap support for B5DPH9 as seed ortholog is 100%.

Group of orthologs #852. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 D.pseudoobscura:234

G3JV06              	100.00%		Q299H1              	100.00%
Bootstrap support for G3JV06 as seed ortholog is 100%.
Bootstrap support for Q299H1 as seed ortholog is 100%.

Group of orthologs #853. Best score 234 bits
Score difference with first non-orthologous sequence - C.militaris:234 D.pseudoobscura:234

G3JMZ6              	100.00%		Q29HV5              	100.00%
Bootstrap support for G3JMZ6 as seed ortholog is 100%.
Bootstrap support for Q29HV5 as seed ortholog is 100%.

Group of orthologs #854. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:233

G3JS48              	100.00%		Q2LZW7              	100.00%
G3JIX0              	42.93%		Q29K73              	24.05%
                    	       		Q2M0V1              	17.09%
Bootstrap support for G3JS48 as seed ortholog is 100%.
Bootstrap support for Q2LZW7 as seed ortholog is 100%.

Group of orthologs #855. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:154

G3JD63              	100.00%		Q297B0              	100.00%
                    	       		Q2M101              	18.62%
                    	       		Q29MH2              	16.00%
Bootstrap support for G3JD63 as seed ortholog is 100%.
Bootstrap support for Q297B0 as seed ortholog is 99%.

Group of orthologs #856. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:45

G3JET8              	100.00%		Q29A20              	100.00%
                    	       		Q298B8              	28.88%
                    	       		Q290Y0              	15.50%
Bootstrap support for G3JET8 as seed ortholog is 99%.
Bootstrap support for Q29A20 as seed ortholog is 89%.

Group of orthologs #857. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:233

G3J6N3              	100.00%		Q29GA0              	100.00%
Bootstrap support for G3J6N3 as seed ortholog is 100%.
Bootstrap support for Q29GA0 as seed ortholog is 100%.

Group of orthologs #858. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:233

G3J8N0              	100.00%		Q29N88              	100.00%
Bootstrap support for G3J8N0 as seed ortholog is 100%.
Bootstrap support for Q29N88 as seed ortholog is 100%.

Group of orthologs #859. Best score 233 bits
Score difference with first non-orthologous sequence - C.militaris:233 D.pseudoobscura:233

G3JMN2              	100.00%		Q29PP8              	100.00%
Bootstrap support for G3JMN2 as seed ortholog is 100%.
Bootstrap support for Q29PP8 as seed ortholog is 100%.

Group of orthologs #860. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:232

G3JC45              	100.00%		Q29HZ0              	100.00%
                    	       		B5E035              	12.99%
                    	       		B5DIU1              	12.32%
                    	       		Q291G4              	11.98%
                    	       		Q291G3              	11.98%
Bootstrap support for G3JC45 as seed ortholog is 99%.
Bootstrap support for Q29HZ0 as seed ortholog is 100%.

Group of orthologs #861. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 D.pseudoobscura:232

G3JBB0              	100.00%		Q27928              	100.00%
                    	       		Q291Z0              	33.33%
Bootstrap support for G3JBB0 as seed ortholog is 100%.
Bootstrap support for Q27928 as seed ortholog is 100%.

Group of orthologs #862. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:111

G3J8I4              	100.00%		B5E1J0              	100.00%
Bootstrap support for G3J8I4 as seed ortholog is 98%.
Bootstrap support for B5E1J0 as seed ortholog is 99%.

Group of orthologs #863. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 D.pseudoobscura:232

G3J432              	100.00%		Q295U7              	100.00%
Bootstrap support for G3J432 as seed ortholog is 100%.
Bootstrap support for Q295U7 as seed ortholog is 100%.

Group of orthologs #864. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:39

G3JD65              	100.00%		Q28XM2              	100.00%
Bootstrap support for G3JD65 as seed ortholog is 99%.
Bootstrap support for Q28XM2 as seed ortholog is 94%.

Group of orthologs #865. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:11 D.pseudoobscura:51

G3J880              	100.00%		Q29BG1              	100.00%
Bootstrap support for G3J880 as seed ortholog is 56%.
Alternative seed ortholog is G3JCM9 (11 bits away from this cluster)
Bootstrap support for Q29BG1 as seed ortholog is 81%.

Group of orthologs #866. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:101

G3JJB4              	100.00%		Q295Z5              	100.00%
Bootstrap support for G3JJB4 as seed ortholog is 100%.
Bootstrap support for Q295Z5 as seed ortholog is 100%.

Group of orthologs #867. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:232 D.pseudoobscura:232

G3JAG3              	100.00%		Q29LJ5              	100.00%
Bootstrap support for G3JAG3 as seed ortholog is 100%.
Bootstrap support for Q29LJ5 as seed ortholog is 100%.

Group of orthologs #868. Best score 232 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:54

G3JLV1              	100.00%		Q29I41              	100.00%
Bootstrap support for G3JLV1 as seed ortholog is 99%.
Bootstrap support for Q29I41 as seed ortholog is 98%.

Group of orthologs #869. Best score 231 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:7

G3JLK2              	100.00%		Q29D83              	100.00%
Bootstrap support for G3JLK2 as seed ortholog is 99%.
Bootstrap support for Q29D83 as seed ortholog is 62%.
Alternative seed ortholog is Q295X7 (7 bits away from this cluster)

Group of orthologs #870. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 D.pseudoobscura:230

G3J6D0              	100.00%		Q295H9              	100.00%
Bootstrap support for G3J6D0 as seed ortholog is 100%.
Bootstrap support for Q295H9 as seed ortholog is 100%.

Group of orthologs #871. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 D.pseudoobscura:68

G3J3A1              	100.00%		Q29HA5              	100.00%
Bootstrap support for G3J3A1 as seed ortholog is 100%.
Bootstrap support for Q29HA5 as seed ortholog is 98%.

Group of orthologs #872. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 D.pseudoobscura:230

G3JE15              	100.00%		Q29HH8              	100.00%
Bootstrap support for G3JE15 as seed ortholog is 100%.
Bootstrap support for Q29HH8 as seed ortholog is 100%.

Group of orthologs #873. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 D.pseudoobscura:230

G3JM12              	100.00%		Q29GR6              	100.00%
Bootstrap support for G3JM12 as seed ortholog is 100%.
Bootstrap support for Q29GR6 as seed ortholog is 100%.

Group of orthologs #874. Best score 230 bits
Score difference with first non-orthologous sequence - C.militaris:230 D.pseudoobscura:230

G3JKH2              	100.00%		Q29LZ7              	100.00%
Bootstrap support for G3JKH2 as seed ortholog is 100%.
Bootstrap support for Q29LZ7 as seed ortholog is 100%.

Group of orthologs #875. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:114 D.pseudoobscura:34

G3JM32              	100.00%		B5DPR3              	100.00%
                    	       		B5DN66              	24.46%
Bootstrap support for G3JM32 as seed ortholog is 100%.
Bootstrap support for B5DPR3 as seed ortholog is 90%.

Group of orthologs #876. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 D.pseudoobscura:229

G3J8P4              	100.00%		Q29L21              	100.00%
Bootstrap support for G3J8P4 as seed ortholog is 100%.
Bootstrap support for Q29L21 as seed ortholog is 100%.

Group of orthologs #877. Best score 229 bits
Score difference with first non-orthologous sequence - C.militaris:229 D.pseudoobscura:229

G3JNA9              	100.00%		Q29D54              	100.00%
Bootstrap support for G3JNA9 as seed ortholog is 100%.
Bootstrap support for Q29D54 as seed ortholog is 100%.

Group of orthologs #878. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:13 D.pseudoobscura:228

G3J6J5              	100.00%		Q2LZ65              	100.00%
                    	       		Q2LZ66              	30.54%
                    	       		Q29EZ1              	17.25%
                    	       		B5DPD4              	13.29%
                    	       		Q292Y3              	12.12%
                    	       		B5DSP9              	9.79%
                    	       		B5DPD5              	8.39%
Bootstrap support for G3J6J5 as seed ortholog is 62%.
Alternative seed ortholog is G3JCU9 (13 bits away from this cluster)
Bootstrap support for Q2LZ65 as seed ortholog is 100%.

Group of orthologs #879. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:228

G3J6R9              	100.00%		B5DH86              	100.00%
                    	       		Q29CJ7              	100.00%
Bootstrap support for G3J6R9 as seed ortholog is 100%.
Bootstrap support for B5DH86 as seed ortholog is 100%.
Bootstrap support for Q29CJ7 as seed ortholog is 100%.

Group of orthologs #880. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:178

G3J835              	100.00%		Q28YR7              	100.00%
Bootstrap support for G3J835 as seed ortholog is 100%.
Bootstrap support for Q28YR7 as seed ortholog is 99%.

Group of orthologs #881. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:171

G3J2P0              	100.00%		Q29A78              	100.00%
Bootstrap support for G3J2P0 as seed ortholog is 100%.
Bootstrap support for Q29A78 as seed ortholog is 100%.

Group of orthologs #882. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:228

G3J7T3              	100.00%		Q298K0              	100.00%
Bootstrap support for G3J7T3 as seed ortholog is 100%.
Bootstrap support for Q298K0 as seed ortholog is 100%.

Group of orthologs #883. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:181

G3JIP8              	100.00%		B5E066              	100.00%
Bootstrap support for G3JIP8 as seed ortholog is 100%.
Bootstrap support for B5E066 as seed ortholog is 99%.

Group of orthologs #884. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:228

G3JNV1              	100.00%		B5DWV9              	100.00%
Bootstrap support for G3JNV1 as seed ortholog is 100%.
Bootstrap support for B5DWV9 as seed ortholog is 100%.

Group of orthologs #885. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:175

G3JPX2              	100.00%		Q28XH3              	100.00%
Bootstrap support for G3JPX2 as seed ortholog is 100%.
Bootstrap support for Q28XH3 as seed ortholog is 100%.

Group of orthologs #886. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:228

G3JRE5              	100.00%		Q28Y69              	100.00%
Bootstrap support for G3JRE5 as seed ortholog is 100%.
Bootstrap support for Q28Y69 as seed ortholog is 100%.

Group of orthologs #887. Best score 228 bits
Score difference with first non-orthologous sequence - C.militaris:228 D.pseudoobscura:228

G3JPU8              	100.00%		Q2LYV5              	100.00%
Bootstrap support for G3JPU8 as seed ortholog is 100%.
Bootstrap support for Q2LYV5 as seed ortholog is 100%.

Group of orthologs #888. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:89

G3J8P1              	100.00%		Q29B91              	100.00%
G3JBM4              	39.69%		Q28Z99              	5.13%
G3JAM3              	16.49%		
Bootstrap support for G3J8P1 as seed ortholog is 98%.
Bootstrap support for Q29B91 as seed ortholog is 99%.

Group of orthologs #889. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 D.pseudoobscura:227

G3J5N1              	100.00%		Q29LR4              	100.00%
                    	       		B5DIU2              	56.94%
                    	       		B5DL11              	32.33%
Bootstrap support for G3J5N1 as seed ortholog is 100%.
Bootstrap support for Q29LR4 as seed ortholog is 100%.

Group of orthologs #890. Best score 227 bits
Score difference with first non-orthologous sequence - C.militaris:227 D.pseudoobscura:88

G3JB31              	100.00%		Q28Z11              	100.00%
Bootstrap support for G3JB31 as seed ortholog is 100%.
Bootstrap support for Q28Z11 as seed ortholog is 96%.

Group of orthologs #891. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:226

G3JDR3              	100.00%		Q29J67              	100.00%
G3JDR4              	5.66%		B5DLC2              	6.62%
Bootstrap support for G3JDR3 as seed ortholog is 99%.
Bootstrap support for Q29J67 as seed ortholog is 100%.

Group of orthologs #892. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 D.pseudoobscura:226

G3J4P1              	100.00%		B5DYG6              	100.00%
Bootstrap support for G3J4P1 as seed ortholog is 100%.
Bootstrap support for B5DYG6 as seed ortholog is 100%.

Group of orthologs #893. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:226

G3J4P5              	100.00%		Q290F1              	100.00%
Bootstrap support for G3J4P5 as seed ortholog is 94%.
Bootstrap support for Q290F1 as seed ortholog is 100%.

Group of orthologs #894. Best score 226 bits
Score difference with first non-orthologous sequence - C.militaris:226 D.pseudoobscura:226

G3JNB9              	100.00%		Q29CJ3              	100.00%
Bootstrap support for G3JNB9 as seed ortholog is 100%.
Bootstrap support for Q29CJ3 as seed ortholog is 100%.

Group of orthologs #895. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 D.pseudoobscura:225

G3JUK4              	100.00%		Q29B31              	100.00%
G3J5Y0              	12.29%		
Bootstrap support for G3JUK4 as seed ortholog is 100%.
Bootstrap support for Q29B31 as seed ortholog is 100%.

Group of orthologs #896. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 D.pseudoobscura:225

G3JD40              	100.00%		B5DRI8              	100.00%
Bootstrap support for G3JD40 as seed ortholog is 100%.
Bootstrap support for B5DRI8 as seed ortholog is 100%.

Group of orthologs #897. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:168

G3J657              	100.00%		Q296V5              	100.00%
Bootstrap support for G3J657 as seed ortholog is 99%.
Bootstrap support for Q296V5 as seed ortholog is 100%.

Group of orthologs #898. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:225 D.pseudoobscura:225

G3J3N6              	100.00%		Q29E23              	100.00%
Bootstrap support for G3J3N6 as seed ortholog is 100%.
Bootstrap support for Q29E23 as seed ortholog is 100%.

Group of orthologs #899. Best score 225 bits
Score difference with first non-orthologous sequence - C.militaris:150 D.pseudoobscura:141

G3JBZ4              	100.00%		Q29FJ6              	100.00%
Bootstrap support for G3JBZ4 as seed ortholog is 100%.
Bootstrap support for Q29FJ6 as seed ortholog is 100%.

Group of orthologs #900. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 D.pseudoobscura:224

G3JT26              	100.00%		Q297M7              	100.00%
                    	       		B5DUE5              	17.02%
Bootstrap support for G3JT26 as seed ortholog is 100%.
Bootstrap support for Q297M7 as seed ortholog is 100%.

Group of orthologs #901. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 D.pseudoobscura:224

G3JJ49              	100.00%		Q29LM5              	100.00%
                    	       		Q29NH6              	22.49%
Bootstrap support for G3JJ49 as seed ortholog is 100%.
Bootstrap support for Q29LM5 as seed ortholog is 100%.

Group of orthologs #902. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 D.pseudoobscura:224

G3J3T3              	100.00%		Q291S1              	100.00%
Bootstrap support for G3J3T3 as seed ortholog is 100%.
Bootstrap support for Q291S1 as seed ortholog is 100%.

Group of orthologs #903. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:35 D.pseudoobscura:224

G3JRS4              	100.00%		Q28WQ2              	100.00%
Bootstrap support for G3JRS4 as seed ortholog is 89%.
Bootstrap support for Q28WQ2 as seed ortholog is 100%.

Group of orthologs #904. Best score 224 bits
Score difference with first non-orthologous sequence - C.militaris:224 D.pseudoobscura:69

G3JRR2              	100.00%		Q29D36              	100.00%
Bootstrap support for G3JRR2 as seed ortholog is 100%.
Bootstrap support for Q29D36 as seed ortholog is 97%.

Group of orthologs #905. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 D.pseudoobscura:109

G3JD89              	100.00%		Q292Q3              	100.00%
                    	       		Q29FN6              	7.50%
Bootstrap support for G3JD89 as seed ortholog is 100%.
Bootstrap support for Q292Q3 as seed ortholog is 98%.

Group of orthologs #906. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 D.pseudoobscura:223

G3J5M8              	100.00%		B5DWQ1              	100.00%
Bootstrap support for G3J5M8 as seed ortholog is 100%.
Bootstrap support for B5DWQ1 as seed ortholog is 100%.

Group of orthologs #907. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 D.pseudoobscura:223

G3J569              	100.00%		Q29F49              	100.00%
Bootstrap support for G3J569 as seed ortholog is 100%.
Bootstrap support for Q29F49 as seed ortholog is 100%.

Group of orthologs #908. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:107

G3JAF1              	100.00%		Q29H12              	100.00%
Bootstrap support for G3JAF1 as seed ortholog is 99%.
Bootstrap support for Q29H12 as seed ortholog is 99%.

Group of orthologs #909. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:223 D.pseudoobscura:223

G3JMV1              	100.00%		Q297I7              	100.00%
Bootstrap support for G3JMV1 as seed ortholog is 100%.
Bootstrap support for Q297I7 as seed ortholog is 100%.

Group of orthologs #910. Best score 223 bits
Score difference with first non-orthologous sequence - C.militaris:142 D.pseudoobscura:42

G3JUM0              	100.00%		Q295G1              	100.00%
Bootstrap support for G3JUM0 as seed ortholog is 99%.
Bootstrap support for Q295G1 as seed ortholog is 85%.

Group of orthologs #911. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:30 D.pseudoobscura:22

G3J4K5              	100.00%		Q28WX5              	100.00%
                    	       		B5DYR7              	36.59%
                    	       		B5DHG5              	10.98%
Bootstrap support for G3J4K5 as seed ortholog is 92%.
Bootstrap support for Q28WX5 as seed ortholog is 89%.

Group of orthologs #912. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 D.pseudoobscura:222

G3JE13              	100.00%		B5DX75              	100.00%
Bootstrap support for G3JE13 as seed ortholog is 100%.
Bootstrap support for B5DX75 as seed ortholog is 100%.

Group of orthologs #913. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 D.pseudoobscura:222

G3J8Y1              	100.00%		Q291U5              	100.00%
Bootstrap support for G3J8Y1 as seed ortholog is 100%.
Bootstrap support for Q291U5 as seed ortholog is 100%.

Group of orthologs #914. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:222 D.pseudoobscura:222

G3JNT1              	100.00%		Q290Y3              	100.00%
Bootstrap support for G3JNT1 as seed ortholog is 100%.
Bootstrap support for Q290Y3 as seed ortholog is 100%.

Group of orthologs #915. Best score 222 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:113

G3JS56              	100.00%		Q299A4              	100.00%
Bootstrap support for G3JS56 as seed ortholog is 100%.
Bootstrap support for Q299A4 as seed ortholog is 100%.

Group of orthologs #916. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:221

G3JKJ5              	100.00%		Q28ZS2              	100.00%
G3JJ77              	8.05%		B5E155              	44.92%
Bootstrap support for G3JKJ5 as seed ortholog is 93%.
Bootstrap support for Q28ZS2 as seed ortholog is 100%.

Group of orthologs #917. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:221

G3J5Z0              	100.00%		Q29DK4              	100.00%
                    	       		B5DYB0              	41.33%
Bootstrap support for G3J5Z0 as seed ortholog is 100%.
Bootstrap support for Q29DK4 as seed ortholog is 100%.

Group of orthologs #918. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:221

G3J4C5              	100.00%		B5DLV3              	100.00%
Bootstrap support for G3J4C5 as seed ortholog is 100%.
Bootstrap support for B5DLV3 as seed ortholog is 100%.

Group of orthologs #919. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:221

G3J526              	100.00%		Q293F7              	100.00%
Bootstrap support for G3J526 as seed ortholog is 100%.
Bootstrap support for Q293F7 as seed ortholog is 100%.

Group of orthologs #920. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:221

G3JHS1              	100.00%		Q290C0              	100.00%
Bootstrap support for G3JHS1 as seed ortholog is 100%.
Bootstrap support for Q290C0 as seed ortholog is 100%.

Group of orthologs #921. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:65

G3JDZ4              	100.00%		Q29G35              	100.00%
Bootstrap support for G3JDZ4 as seed ortholog is 100%.
Bootstrap support for Q29G35 as seed ortholog is 99%.

Group of orthologs #922. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:221

G3JI33              	100.00%		Q29DY0              	100.00%
Bootstrap support for G3JI33 as seed ortholog is 100%.
Bootstrap support for Q29DY0 as seed ortholog is 100%.

Group of orthologs #923. Best score 221 bits
Score difference with first non-orthologous sequence - C.militaris:221 D.pseudoobscura:221

G3JKF0              	100.00%		Q29FD5              	100.00%
Bootstrap support for G3JKF0 as seed ortholog is 100%.
Bootstrap support for Q29FD5 as seed ortholog is 100%.

Group of orthologs #924. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 D.pseudoobscura:220

G3JBB9              	100.00%		B5DS72              	100.00%
                    	       		Q29PG5              	100.00%
Bootstrap support for G3JBB9 as seed ortholog is 100%.
Bootstrap support for B5DS72 as seed ortholog is 100%.
Bootstrap support for Q29PG5 as seed ortholog is 100%.

Group of orthologs #925. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 D.pseudoobscura:220

G3J3R3              	100.00%		Q29JC5              	100.00%
Bootstrap support for G3J3R3 as seed ortholog is 100%.
Bootstrap support for Q29JC5 as seed ortholog is 100%.

Group of orthologs #926. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:20 D.pseudoobscura:77

G3JDR6              	100.00%		Q29MK6              	100.00%
Bootstrap support for G3JDR6 as seed ortholog is 76%.
Bootstrap support for Q29MK6 as seed ortholog is 99%.

Group of orthologs #927. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 D.pseudoobscura:113

G3JUC2              	100.00%		Q296Z4              	100.00%
Bootstrap support for G3JUC2 as seed ortholog is 100%.
Bootstrap support for Q296Z4 as seed ortholog is 99%.

Group of orthologs #928. Best score 220 bits
Score difference with first non-orthologous sequence - C.militaris:220 D.pseudoobscura:77

G3JNV3              	100.00%		Q29KI2              	100.00%
Bootstrap support for G3JNV3 as seed ortholog is 100%.
Bootstrap support for Q29KI2 as seed ortholog is 99%.

Group of orthologs #929. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 D.pseudoobscura:219

G3JP35              	100.00%		Q29J49              	100.00%
                    	       		Q29N33              	24.86%
Bootstrap support for G3JP35 as seed ortholog is 100%.
Bootstrap support for Q29J49 as seed ortholog is 100%.

Group of orthologs #930. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 D.pseudoobscura:219

G3J2K8              	100.00%		Q291R2              	100.00%
Bootstrap support for G3J2K8 as seed ortholog is 100%.
Bootstrap support for Q291R2 as seed ortholog is 100%.

Group of orthologs #931. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:96

G3JA31              	100.00%		Q29FF4              	100.00%
Bootstrap support for G3JA31 as seed ortholog is 100%.
Bootstrap support for Q29FF4 as seed ortholog is 99%.

Group of orthologs #932. Best score 219 bits
Score difference with first non-orthologous sequence - C.militaris:219 D.pseudoobscura:219

G3J5V6              	100.00%		Q29M95              	100.00%
Bootstrap support for G3J5V6 as seed ortholog is 100%.
Bootstrap support for Q29M95 as seed ortholog is 100%.

Group of orthologs #933. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 D.pseudoobscura:94

G3JG28              	100.00%		B5E134              	100.00%
                    	       		Q29MJ6              	7.94%
Bootstrap support for G3JG28 as seed ortholog is 100%.
Bootstrap support for B5E134 as seed ortholog is 99%.

Group of orthologs #934. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:13 D.pseudoobscura:90

G3JJN8              	100.00%		B5DQ82              	100.00%
Bootstrap support for G3JJN8 as seed ortholog is 69%.
Alternative seed ortholog is G3JH01 (13 bits away from this cluster)
Bootstrap support for B5DQ82 as seed ortholog is 98%.

Group of orthologs #935. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:125 D.pseudoobscura:150

G3JEK3              	100.00%		B5DYN3              	100.00%
Bootstrap support for G3JEK3 as seed ortholog is 99%.
Bootstrap support for B5DYN3 as seed ortholog is 100%.

Group of orthologs #936. Best score 218 bits
Score difference with first non-orthologous sequence - C.militaris:218 D.pseudoobscura:218

G3JB53              	100.00%		Q29BR9              	100.00%
Bootstrap support for G3JB53 as seed ortholog is 100%.
Bootstrap support for Q29BR9 as seed ortholog is 100%.

Group of orthologs #937. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:111

G3JDZ8              	100.00%		B5DK47              	100.00%
                    	       		Q29P34              	44.08%
Bootstrap support for G3JDZ8 as seed ortholog is 90%.
Bootstrap support for B5DK47 as seed ortholog is 99%.

Group of orthologs #938. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 D.pseudoobscura:217

G3JPT8              	100.00%		Q29FJ3              	100.00%
                    	       		Q29KM9              	14.57%
Bootstrap support for G3JPT8 as seed ortholog is 100%.
Bootstrap support for Q29FJ3 as seed ortholog is 100%.

Group of orthologs #939. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 D.pseudoobscura:217

G3JLM6              	100.00%		B5DWM0              	100.00%
Bootstrap support for G3JLM6 as seed ortholog is 100%.
Bootstrap support for B5DWM0 as seed ortholog is 100%.

Group of orthologs #940. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:217

G3J7S0              	100.00%		Q29D03              	100.00%
Bootstrap support for G3J7S0 as seed ortholog is 99%.
Bootstrap support for Q29D03 as seed ortholog is 100%.

Group of orthologs #941. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:217 D.pseudoobscura:123

G3J6N2              	100.00%		Q29HR6              	100.00%
Bootstrap support for G3J6N2 as seed ortholog is 100%.
Bootstrap support for Q29HR6 as seed ortholog is 99%.

Group of orthologs #942. Best score 217 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:2

G3JB36              	100.00%		Q29D91              	100.00%
Bootstrap support for G3JB36 as seed ortholog is 100%.
Bootstrap support for Q29D91 as seed ortholog is 53%.
Alternative seed ortholog is Q29CQ9 (2 bits away from this cluster)

Group of orthologs #943. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 D.pseudoobscura:81

G3JCX0              	100.00%		Q29GB9              	100.00%
                    	       		B5DZB3              	72.44%
Bootstrap support for G3JCX0 as seed ortholog is 100%.
Bootstrap support for Q29GB9 as seed ortholog is 99%.

Group of orthologs #944. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:34 D.pseudoobscura:141

G3JTJ9              	100.00%		Q29E14              	100.00%
                    	       		B5DLL3              	9.77%
Bootstrap support for G3JTJ9 as seed ortholog is 81%.
Bootstrap support for Q29E14 as seed ortholog is 99%.

Group of orthologs #945. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:216 D.pseudoobscura:216

G3JL01              	100.00%		Q28YY2              	100.00%
Bootstrap support for G3JL01 as seed ortholog is 100%.
Bootstrap support for Q28YY2 as seed ortholog is 100%.

Group of orthologs #946. Best score 216 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:34

G3JJP4              	100.00%		Q292Z8              	100.00%
Bootstrap support for G3JJP4 as seed ortholog is 98%.
Bootstrap support for Q292Z8 as seed ortholog is 87%.

Group of orthologs #947. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 D.pseudoobscura:153

G3JC76              	100.00%		Q291U3              	100.00%
                    	       		B5DZ75              	36.45%
                    	       		Q29LA0              	21.46%
                    	       		Q29N16              	20.17%
                    	       		Q29ID8              	17.48%
                    	       		B5DZG7              	14.71%
                    	       		Q28XZ8              	14.71%
                    	       		Q28ZU2              	14.71%
                    	       		Q29F70              	13.23%
                    	       		Q29GB8              	12.67%
                    	       		B5DZP7              	12.58%
                    	       		Q29P54              	7.12%
Bootstrap support for G3JC76 as seed ortholog is 100%.
Bootstrap support for Q291U3 as seed ortholog is 99%.

Group of orthologs #948. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:106

G3J7P1              	100.00%		Q291A4              	100.00%
Bootstrap support for G3J7P1 as seed ortholog is 99%.
Bootstrap support for Q291A4 as seed ortholog is 99%.

Group of orthologs #949. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 D.pseudoobscura:215

G3J3R5              	100.00%		Q29CQ2              	100.00%
Bootstrap support for G3J3R5 as seed ortholog is 100%.
Bootstrap support for Q29CQ2 as seed ortholog is 100%.

Group of orthologs #950. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:215

G3JRK7              	100.00%		Q295D2              	100.00%
Bootstrap support for G3JRK7 as seed ortholog is 99%.
Bootstrap support for Q295D2 as seed ortholog is 100%.

Group of orthologs #951. Best score 215 bits
Score difference with first non-orthologous sequence - C.militaris:215 D.pseudoobscura:215

G3JN04              	100.00%		Q2M0L4              	100.00%
Bootstrap support for G3JN04 as seed ortholog is 100%.
Bootstrap support for Q2M0L4 as seed ortholog is 100%.

Group of orthologs #952. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:214 D.pseudoobscura:148

G3J5Q9              	100.00%		Q29DS5              	100.00%
                    	       		Q29N19              	22.80%
                    	       		Q29N20              	22.33%
                    	       		Q28XV5              	18.55%
                    	       		Q29NC3              	9.43%
                    	       		Q29NC4              	8.81%
                    	       		Q290Y8              	8.18%
Bootstrap support for G3J5Q9 as seed ortholog is 100%.
Bootstrap support for Q29DS5 as seed ortholog is 99%.

Group of orthologs #953. Best score 214 bits
Score difference with first non-orthologous sequence - C.militaris:214 D.pseudoobscura:214

G3JS70              	100.00%		Q29DG3              	100.00%
Bootstrap support for G3JS70 as seed ortholog is 100%.
Bootstrap support for Q29DG3 as seed ortholog is 100%.

Group of orthologs #954. Best score 213 bits
Score difference with first non-orthologous sequence - C.militaris:213 D.pseudoobscura:213

G3JQY9              	100.00%		B5DRX3              	100.00%
Bootstrap support for G3JQY9 as seed ortholog is 100%.
Bootstrap support for B5DRX3 as seed ortholog is 100%.

Group of orthologs #955. Best score 213 bits
Score difference with first non-orthologous sequence - C.militaris:213 D.pseudoobscura:155

G3JK38              	100.00%		Q28YL5              	100.00%
Bootstrap support for G3JK38 as seed ortholog is 100%.
Bootstrap support for Q28YL5 as seed ortholog is 99%.

Group of orthologs #956. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:212

G3J365              	100.00%		Q29GV9              	100.00%
Bootstrap support for G3J365 as seed ortholog is 99%.
Bootstrap support for Q29GV9 as seed ortholog is 100%.

Group of orthologs #957. Best score 212 bits
Score difference with first non-orthologous sequence - C.militaris:212 D.pseudoobscura:212

G3JL93              	100.00%		Q29FN3              	100.00%
Bootstrap support for G3JL93 as seed ortholog is 100%.
Bootstrap support for Q29FN3 as seed ortholog is 100%.

Group of orthologs #958. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 D.pseudoobscura:211

G3J6W5              	100.00%		B5DJ23              	100.00%
Bootstrap support for G3J6W5 as seed ortholog is 100%.
Bootstrap support for B5DJ23 as seed ortholog is 100%.

Group of orthologs #959. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 D.pseudoobscura:211

G3JEF4              	100.00%		I7LPX5              	100.00%
Bootstrap support for G3JEF4 as seed ortholog is 100%.
Bootstrap support for I7LPX5 as seed ortholog is 100%.

Group of orthologs #960. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 D.pseudoobscura:211

G3J4S1              	100.00%		Q29F01              	100.00%
Bootstrap support for G3J4S1 as seed ortholog is 100%.
Bootstrap support for Q29F01 as seed ortholog is 100%.

Group of orthologs #961. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:142

G3JL02              	100.00%		Q295M1              	100.00%
Bootstrap support for G3JL02 as seed ortholog is 99%.
Bootstrap support for Q295M1 as seed ortholog is 100%.

Group of orthologs #962. Best score 211 bits
Score difference with first non-orthologous sequence - C.militaris:211 D.pseudoobscura:211

G3JUE3              	100.00%		Q29F66              	100.00%
Bootstrap support for G3JUE3 as seed ortholog is 100%.
Bootstrap support for Q29F66 as seed ortholog is 100%.

Group of orthologs #963. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:113

G3JMK9              	100.00%		B5DI81              	100.00%
G3JBZ8              	14.11%		
Bootstrap support for G3JMK9 as seed ortholog is 95%.
Bootstrap support for B5DI81 as seed ortholog is 99%.

Group of orthologs #964. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 D.pseudoobscura:210

G3JJR8              	100.00%		Q29BE7              	100.00%
                    	       		B5DY61              	6.12%
Bootstrap support for G3JJR8 as seed ortholog is 100%.
Bootstrap support for Q29BE7 as seed ortholog is 100%.

Group of orthologs #965. Best score 210 bits
Score difference with first non-orthologous sequence - C.militaris:210 D.pseudoobscura:162

G3JPV4              	100.00%		Q295V0              	100.00%
Bootstrap support for G3JPV4 as seed ortholog is 100%.
Bootstrap support for Q295V0 as seed ortholog is 99%.

Group of orthologs #966. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 D.pseudoobscura:209

G3JR78              	100.00%		B5DPP5              	100.00%
                    	       		B5DQE3              	50.23%
                    	       		Q2M046              	36.86%
Bootstrap support for G3JR78 as seed ortholog is 100%.
Bootstrap support for B5DPP5 as seed ortholog is 100%.

Group of orthologs #967. Best score 209 bits
Score difference with first non-orthologous sequence - C.militaris:209 D.pseudoobscura:149

G3JS61              	100.00%		Q28X68              	100.00%
                    	       		B5DKA0              	15.85%
                    	       		B5DKA6              	15.45%
Bootstrap support for G3JS61 as seed ortholog is 100%.
Bootstrap support for Q28X68 as seed ortholog is 100%.

Group of orthologs #968. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:75

G3J7L8              	100.00%		Q29BI6              	100.00%
G3JJW6              	7.59%		Q29CA3              	40.86%
                    	       		Q29C55              	38.38%
                    	       		Q29EE1              	19.38%
                    	       		B5E0Y6              	16.71%
                    	       		Q29C81              	16.25%
                    	       		Q29A32              	15.34%
                    	       		Q293I4              	10.01%
Bootstrap support for G3J7L8 as seed ortholog is 89%.
Bootstrap support for Q29BI6 as seed ortholog is 93%.

Group of orthologs #969. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:208

G3J4I9              	100.00%		B5DU68              	100.00%
Bootstrap support for G3J4I9 as seed ortholog is 100%.
Bootstrap support for B5DU68 as seed ortholog is 100%.

Group of orthologs #970. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:208

G3J6Q0              	100.00%		Q291Y0              	100.00%
Bootstrap support for G3J6Q0 as seed ortholog is 100%.
Bootstrap support for Q291Y0 as seed ortholog is 100%.

Group of orthologs #971. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:208

G3J988              	100.00%		Q29AN8              	100.00%
Bootstrap support for G3J988 as seed ortholog is 100%.
Bootstrap support for Q29AN8 as seed ortholog is 100%.

Group of orthologs #972. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:208

G3J593              	100.00%		Q2LZF8              	100.00%
Bootstrap support for G3J593 as seed ortholog is 100%.
Bootstrap support for Q2LZF8 as seed ortholog is 100%.

Group of orthologs #973. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:208

G3JUB1              	100.00%		Q290H8              	100.00%
Bootstrap support for G3JUB1 as seed ortholog is 100%.
Bootstrap support for Q290H8 as seed ortholog is 100%.

Group of orthologs #974. Best score 208 bits
Score difference with first non-orthologous sequence - C.militaris:208 D.pseudoobscura:96

G3JKW7              	100.00%		Q29KW7              	100.00%
Bootstrap support for G3JKW7 as seed ortholog is 100%.
Bootstrap support for Q29KW7 as seed ortholog is 92%.

Group of orthologs #975. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3J4J4              	100.00%		Q29NJ3              	100.00%
                    	       		B5DLE5              	31.67%
                    	       		B5DNK9              	23.88%
                    	       		B5DLQ7              	22.64%
                    	       		B5DLR2              	17.03%
Bootstrap support for G3J4J4 as seed ortholog is 100%.
Bootstrap support for Q29NJ3 as seed ortholog is 100%.

Group of orthologs #976. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3JSZ3              	100.00%		B5DIQ2              	100.00%
Bootstrap support for G3JSZ3 as seed ortholog is 100%.
Bootstrap support for B5DIQ2 as seed ortholog is 100%.

Group of orthologs #977. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3JCX3              	100.00%		Q29BX7              	100.00%
Bootstrap support for G3JCX3 as seed ortholog is 100%.
Bootstrap support for Q29BX7 as seed ortholog is 100%.

Group of orthologs #978. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3JKF9              	100.00%		Q29A91              	100.00%
Bootstrap support for G3JKF9 as seed ortholog is 100%.
Bootstrap support for Q29A91 as seed ortholog is 100%.

Group of orthologs #979. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:135 D.pseudoobscura:83

G3JDL4              	100.00%		Q29IP3              	100.00%
Bootstrap support for G3JDL4 as seed ortholog is 100%.
Bootstrap support for Q29IP3 as seed ortholog is 98%.

Group of orthologs #980. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:207

G3JPX1              	100.00%		Q298G6              	100.00%
Bootstrap support for G3JPX1 as seed ortholog is 99%.
Bootstrap support for Q298G6 as seed ortholog is 100%.

Group of orthologs #981. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3JET7              	100.00%		Q29K78              	100.00%
Bootstrap support for G3JET7 as seed ortholog is 100%.
Bootstrap support for Q29K78 as seed ortholog is 100%.

Group of orthologs #982. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3JCS9              	100.00%		Q29NU9              	100.00%
Bootstrap support for G3JCS9 as seed ortholog is 100%.
Bootstrap support for Q29NU9 as seed ortholog is 100%.

Group of orthologs #983. Best score 207 bits
Score difference with first non-orthologous sequence - C.militaris:207 D.pseudoobscura:207

G3JRV8              	100.00%		Q298G1              	100.00%
Bootstrap support for G3JRV8 as seed ortholog is 100%.
Bootstrap support for Q298G1 as seed ortholog is 100%.

Group of orthologs #984. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 D.pseudoobscura:206

G3JFF6              	100.00%		B5DXL4              	100.00%
Bootstrap support for G3JFF6 as seed ortholog is 100%.
Bootstrap support for B5DXL4 as seed ortholog is 100%.

Group of orthologs #985. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 D.pseudoobscura:206

G3JBG0              	100.00%		Q29C26              	100.00%
Bootstrap support for G3JBG0 as seed ortholog is 100%.
Bootstrap support for Q29C26 as seed ortholog is 100%.

Group of orthologs #986. Best score 206 bits
Score difference with first non-orthologous sequence - C.militaris:206 D.pseudoobscura:154

G3JIC9              	100.00%		Q29JF3              	100.00%
Bootstrap support for G3JIC9 as seed ortholog is 100%.
Bootstrap support for Q29JF3 as seed ortholog is 99%.

Group of orthologs #987. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 D.pseudoobscura:205

G3JNQ8              	100.00%		Q29GI1              	100.00%
                    	       		Q293K1              	17.31%
                    	       		Q29GW2              	9.64%
Bootstrap support for G3JNQ8 as seed ortholog is 100%.
Bootstrap support for Q29GI1 as seed ortholog is 100%.

Group of orthologs #988. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:119 D.pseudoobscura:114

G3JD37              	100.00%		Q296J4              	100.00%
                    	       		B5DXP5              	32.68%
Bootstrap support for G3JD37 as seed ortholog is 100%.
Bootstrap support for Q296J4 as seed ortholog is 100%.

Group of orthologs #989. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 D.pseudoobscura:205

G3JQ40              	100.00%		Q297I8              	100.00%
                    	       		Q29LM4              	30.16%
Bootstrap support for G3JQ40 as seed ortholog is 100%.
Bootstrap support for Q297I8 as seed ortholog is 100%.

Group of orthologs #990. Best score 205 bits
Score difference with first non-orthologous sequence - C.militaris:205 D.pseudoobscura:205

G3J597              	100.00%		Q29IR2              	100.00%
Bootstrap support for G3J597 as seed ortholog is 100%.
Bootstrap support for Q29IR2 as seed ortholog is 100%.

Group of orthologs #991. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:56

G3J3F7              	100.00%		Q28ZA4              	100.00%
                    	       		B5DMB8              	55.83%
Bootstrap support for G3J3F7 as seed ortholog is 96%.
Bootstrap support for Q28ZA4 as seed ortholog is 97%.

Group of orthologs #992. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:204 D.pseudoobscura:204

G3JI03              	100.00%		Q29DE9              	100.00%
                    	       		B5DYA2              	49.41%
Bootstrap support for G3JI03 as seed ortholog is 100%.
Bootstrap support for Q29DE9 as seed ortholog is 100%.

Group of orthologs #993. Best score 204 bits
Score difference with first non-orthologous sequence - C.militaris:119 D.pseudoobscura:204

G3J728              	100.00%		Q28ZC8              	100.00%
Bootstrap support for G3J728 as seed ortholog is 99%.
Bootstrap support for Q28ZC8 as seed ortholog is 100%.

Group of orthologs #994. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:22 D.pseudoobscura:203

G3JFL9              	100.00%		Q29PH5              	100.00%
G3JB06              	30.26%		B5DMM9              	12.22%
                    	       		Q296X0              	8.29%
Bootstrap support for G3JFL9 as seed ortholog is 84%.
Bootstrap support for Q29PH5 as seed ortholog is 100%.

Group of orthologs #995. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:203

G3J5A4              	100.00%		Q296L6              	100.00%
Bootstrap support for G3J5A4 as seed ortholog is 100%.
Bootstrap support for Q296L6 as seed ortholog is 100%.

Group of orthologs #996. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:203

G3J904              	100.00%		Q294R9              	100.00%
Bootstrap support for G3J904 as seed ortholog is 100%.
Bootstrap support for Q294R9 as seed ortholog is 100%.

Group of orthologs #997. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:203

G3J833              	100.00%		Q29MN6              	100.00%
Bootstrap support for G3J833 as seed ortholog is 100%.
Bootstrap support for Q29MN6 as seed ortholog is 100%.

Group of orthologs #998. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:203

G3JG36              	100.00%		Q29MV0              	100.00%
Bootstrap support for G3JG36 as seed ortholog is 100%.
Bootstrap support for Q29MV0 as seed ortholog is 100%.

Group of orthologs #999. Best score 203 bits
Score difference with first non-orthologous sequence - C.militaris:203 D.pseudoobscura:203

G3JMV8              	100.00%		Q29NM4              	100.00%
Bootstrap support for G3JMV8 as seed ortholog is 100%.
Bootstrap support for Q29NM4 as seed ortholog is 100%.

Group of orthologs #1000. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:129

G3J3G7              	100.00%		Q29JJ3              	100.00%
                    	       		Q29MH7              	17.54%
Bootstrap support for G3J3G7 as seed ortholog is 94%.
Bootstrap support for Q29JJ3 as seed ortholog is 98%.

Group of orthologs #1001. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 D.pseudoobscura:111

G3JNC8              	100.00%		Q290H0              	100.00%
                    	       		Q29KG0              	100.00%
Bootstrap support for G3JNC8 as seed ortholog is 100%.
Bootstrap support for Q290H0 as seed ortholog is 100%.
Bootstrap support for Q29KG0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 D.pseudoobscura:202

G3J8D2              	100.00%		Q299C2              	100.00%
Bootstrap support for G3J8D2 as seed ortholog is 100%.
Bootstrap support for Q299C2 as seed ortholog is 100%.

Group of orthologs #1003. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:202

G3JCH3              	100.00%		Q29G74              	100.00%
Bootstrap support for G3JCH3 as seed ortholog is 99%.
Bootstrap support for Q29G74 as seed ortholog is 100%.

Group of orthologs #1004. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 D.pseudoobscura:202

G3JCY0              	100.00%		Q2M0V0              	100.00%
Bootstrap support for G3JCY0 as seed ortholog is 100%.
Bootstrap support for Q2M0V0 as seed ortholog is 100%.

Group of orthologs #1005. Best score 202 bits
Score difference with first non-orthologous sequence - C.militaris:202 D.pseudoobscura:154

G3JJY9              	100.00%		Q2M0V3              	100.00%
Bootstrap support for G3JJY9 as seed ortholog is 100%.
Bootstrap support for Q2M0V3 as seed ortholog is 99%.

Group of orthologs #1006. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 D.pseudoobscura:110

G3J4T0              	100.00%		Q29HG9              	100.00%
Bootstrap support for G3J4T0 as seed ortholog is 100%.
Bootstrap support for Q29HG9 as seed ortholog is 99%.

Group of orthologs #1007. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 D.pseudoobscura:201

G3JUC8              	100.00%		Q28YJ4              	100.00%
Bootstrap support for G3JUC8 as seed ortholog is 100%.
Bootstrap support for Q28YJ4 as seed ortholog is 100%.

Group of orthologs #1008. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 D.pseudoobscura:201

G3JLL3              	100.00%		Q29HG2              	100.00%
Bootstrap support for G3JLL3 as seed ortholog is 100%.
Bootstrap support for Q29HG2 as seed ortholog is 100%.

Group of orthologs #1009. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:201

G3JKP4              	100.00%		Q29J97              	100.00%
Bootstrap support for G3JKP4 as seed ortholog is 96%.
Bootstrap support for Q29J97 as seed ortholog is 100%.

Group of orthologs #1010. Best score 201 bits
Score difference with first non-orthologous sequence - C.militaris:201 D.pseudoobscura:201

G3JFU6              	100.00%		Q2LZ30              	100.00%
Bootstrap support for G3JFU6 as seed ortholog is 100%.
Bootstrap support for Q2LZ30 as seed ortholog is 100%.

Group of orthologs #1011. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 D.pseudoobscura:200

G3J7T2              	100.00%		B5DK37              	100.00%
Bootstrap support for G3J7T2 as seed ortholog is 100%.
Bootstrap support for B5DK37 as seed ortholog is 100%.

Group of orthologs #1012. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:200

G3J6Y6              	100.00%		Q29CI3              	100.00%
Bootstrap support for G3J6Y6 as seed ortholog is 99%.
Bootstrap support for Q29CI3 as seed ortholog is 100%.

Group of orthologs #1013. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 D.pseudoobscura:200

G3JDI2              	100.00%		Q29F17              	100.00%
Bootstrap support for G3JDI2 as seed ortholog is 100%.
Bootstrap support for Q29F17 as seed ortholog is 100%.

Group of orthologs #1014. Best score 200 bits
Score difference with first non-orthologous sequence - C.militaris:200 D.pseudoobscura:200

G3JTL8              	100.00%		Q2M0U8              	100.00%
Bootstrap support for G3JTL8 as seed ortholog is 100%.
Bootstrap support for Q2M0U8 as seed ortholog is 100%.

Group of orthologs #1015. Best score 199 bits
Score difference with first non-orthologous sequence - C.militaris:199 D.pseudoobscura:199

G3J5T7              	100.00%		Q28X16              	100.00%
Bootstrap support for G3J5T7 as seed ortholog is 100%.
Bootstrap support for Q28X16 as seed ortholog is 100%.

Group of orthologs #1016. Best score 199 bits
Score difference with first non-orthologous sequence - C.militaris:199 D.pseudoobscura:199

G3JHJ9              	100.00%		Q293Q0              	100.00%
Bootstrap support for G3JHJ9 as seed ortholog is 100%.
Bootstrap support for Q293Q0 as seed ortholog is 100%.

Group of orthologs #1017. Best score 199 bits
Score difference with first non-orthologous sequence - C.militaris:199 D.pseudoobscura:199

G3JN43              	100.00%		Q29D87              	100.00%
Bootstrap support for G3JN43 as seed ortholog is 100%.
Bootstrap support for Q29D87 as seed ortholog is 100%.

Group of orthologs #1018. Best score 199 bits
Score difference with first non-orthologous sequence - C.militaris:199 D.pseudoobscura:199

G3JKT2              	100.00%		Q2M0K0              	100.00%
Bootstrap support for G3JKT2 as seed ortholog is 100%.
Bootstrap support for Q2M0K0 as seed ortholog is 100%.

Group of orthologs #1019. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:85

G3JPR6              	100.00%		Q298L3              	100.00%
                    	       		B5DWJ8              	9.20%
                    	       		I5ANC8              	6.80%
Bootstrap support for G3JPR6 as seed ortholog is 99%.
Bootstrap support for Q298L3 as seed ortholog is 99%.

Group of orthologs #1020. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:29

G3JHC2              	100.00%		B5DKH1              	100.00%
Bootstrap support for G3JHC2 as seed ortholog is 99%.
Bootstrap support for B5DKH1 as seed ortholog is 92%.

Group of orthologs #1021. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:198 D.pseudoobscura:198

G3JDG9              	100.00%		Q29B04              	100.00%
Bootstrap support for G3JDG9 as seed ortholog is 100%.
Bootstrap support for Q29B04 as seed ortholog is 100%.

Group of orthologs #1022. Best score 198 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:151

G3JKS9              	100.00%		Q29NY8              	100.00%
Bootstrap support for G3JKS9 as seed ortholog is 99%.
Bootstrap support for Q29NY8 as seed ortholog is 99%.

Group of orthologs #1023. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:130

G3JAP1              	100.00%		Q297N4              	100.00%
                    	       		Q29IB7              	17.88%
                    	       		B5DLK8              	14.39%
Bootstrap support for G3JAP1 as seed ortholog is 92%.
Bootstrap support for Q297N4 as seed ortholog is 99%.

Group of orthologs #1024. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 D.pseudoobscura:197

G3J5V4              	100.00%		Q292H2              	100.00%
Bootstrap support for G3J5V4 as seed ortholog is 100%.
Bootstrap support for Q292H2 as seed ortholog is 100%.

Group of orthologs #1025. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:197 D.pseudoobscura:129

G3J4G0              	100.00%		Q29I30              	100.00%
Bootstrap support for G3J4G0 as seed ortholog is 100%.
Bootstrap support for Q29I30 as seed ortholog is 99%.

Group of orthologs #1026. Best score 197 bits
Score difference with first non-orthologous sequence - C.militaris:14 D.pseudoobscura:197

G3JMV9              	100.00%		Q29A01              	100.00%
Bootstrap support for G3JMV9 as seed ortholog is 66%.
Alternative seed ortholog is G3JCU9 (14 bits away from this cluster)
Bootstrap support for Q29A01 as seed ortholog is 100%.

Group of orthologs #1027. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 D.pseudoobscura:196

G3J914              	100.00%		B5DMU8              	100.00%
Bootstrap support for G3J914 as seed ortholog is 100%.
Bootstrap support for B5DMU8 as seed ortholog is 100%.

Group of orthologs #1028. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:100

G3JK87              	100.00%		B5DIU6              	100.00%
Bootstrap support for G3JK87 as seed ortholog is 94%.
Bootstrap support for B5DIU6 as seed ortholog is 98%.

Group of orthologs #1029. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 D.pseudoobscura:196

G3J439              	100.00%		Q294B3              	100.00%
Bootstrap support for G3J439 as seed ortholog is 100%.
Bootstrap support for Q294B3 as seed ortholog is 100%.

Group of orthologs #1030. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 D.pseudoobscura:196

G3JCT0              	100.00%		Q28ZZ7              	100.00%
Bootstrap support for G3JCT0 as seed ortholog is 100%.
Bootstrap support for Q28ZZ7 as seed ortholog is 100%.

Group of orthologs #1031. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:1 D.pseudoobscura:196

G3JRH0              	100.00%		B5DX68              	100.00%
Bootstrap support for G3JRH0 as seed ortholog is 66%.
Alternative seed ortholog is G3JBI0 (1 bits away from this cluster)
Bootstrap support for B5DX68 as seed ortholog is 100%.

Group of orthologs #1032. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 D.pseudoobscura:196

G3JLL4              	100.00%		Q293T8              	100.00%
Bootstrap support for G3JLL4 as seed ortholog is 100%.
Bootstrap support for Q293T8 as seed ortholog is 100%.

Group of orthologs #1033. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:196 D.pseudoobscura:196

G3JG67              	100.00%		Q29CJ4              	100.00%
Bootstrap support for G3JG67 as seed ortholog is 100%.
Bootstrap support for Q29CJ4 as seed ortholog is 100%.

Group of orthologs #1034. Best score 196 bits
Score difference with first non-orthologous sequence - C.militaris:95 D.pseudoobscura:196

G3JAU8              	100.00%		Q2LZA8              	100.00%
Bootstrap support for G3JAU8 as seed ortholog is 98%.
Bootstrap support for Q2LZA8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 D.pseudoobscura:195

G3J7F1              	100.00%		Q299G0              	100.00%
Bootstrap support for G3J7F1 as seed ortholog is 100%.
Bootstrap support for Q299G0 as seed ortholog is 100%.

Group of orthologs #1036. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 D.pseudoobscura:195

G3JNK7              	100.00%		Q29D93              	100.00%
Bootstrap support for G3JNK7 as seed ortholog is 100%.
Bootstrap support for Q29D93 as seed ortholog is 100%.

Group of orthologs #1037. Best score 195 bits
Score difference with first non-orthologous sequence - C.militaris:195 D.pseudoobscura:195

G3JFH2              	100.00%		Q2M0V4              	100.00%
Bootstrap support for G3JFH2 as seed ortholog is 100%.
Bootstrap support for Q2M0V4 as seed ortholog is 100%.

Group of orthologs #1038. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 D.pseudoobscura:194

G3JN61              	100.00%		Q292F8              	100.00%
                    	       		Q290Q1              	72.32%
                    	       		B5E0G7              	70.57%
Bootstrap support for G3JN61 as seed ortholog is 100%.
Bootstrap support for Q292F8 as seed ortholog is 100%.

Group of orthologs #1039. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 D.pseudoobscura:194

G3JKK5              	100.00%		B5DK76              	100.00%
                    	       		Q29FG2              	6.47%
Bootstrap support for G3JKK5 as seed ortholog is 100%.
Bootstrap support for B5DK76 as seed ortholog is 100%.

Group of orthologs #1040. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 D.pseudoobscura:194

G3J8P9              	100.00%		Q2M1A9              	100.00%
Bootstrap support for G3J8P9 as seed ortholog is 100%.
Bootstrap support for Q2M1A9 as seed ortholog is 100%.

Group of orthologs #1041. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:194

G3JF56              	100.00%		Q29PI9              	100.00%
Bootstrap support for G3JF56 as seed ortholog is 99%.
Bootstrap support for Q29PI9 as seed ortholog is 100%.

Group of orthologs #1042. Best score 194 bits
Score difference with first non-orthologous sequence - C.militaris:194 D.pseudoobscura:194

G3JQL3              	100.00%		Q29ND5              	100.00%
Bootstrap support for G3JQL3 as seed ortholog is 100%.
Bootstrap support for Q29ND5 as seed ortholog is 100%.

Group of orthologs #1043. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:15 D.pseudoobscura:193

G3JTD1              	100.00%		Q29CP8              	100.00%
G3JTB6              	28.80%		
G3JTA1              	15.64%		
Bootstrap support for G3JTD1 as seed ortholog is 82%.
Bootstrap support for Q29CP8 as seed ortholog is 100%.

Group of orthologs #1044. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 D.pseudoobscura:193

G3JJ71              	100.00%		B5DHB2              	100.00%
Bootstrap support for G3JJ71 as seed ortholog is 100%.
Bootstrap support for B5DHB2 as seed ortholog is 100%.

Group of orthologs #1045. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 D.pseudoobscura:193

G3J4L3              	100.00%		Q294H3              	100.00%
Bootstrap support for G3J4L3 as seed ortholog is 100%.
Bootstrap support for Q294H3 as seed ortholog is 100%.

Group of orthologs #1046. Best score 193 bits
Score difference with first non-orthologous sequence - C.militaris:193 D.pseudoobscura:193

G3JMI3              	100.00%		Q2LZU0              	100.00%
Bootstrap support for G3JMI3 as seed ortholog is 100%.
Bootstrap support for Q2LZU0 as seed ortholog is 100%.

Group of orthologs #1047. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:126 D.pseudoobscura:110

G3J4I4              	100.00%		Q29N51              	100.00%
                    	       		B5DI15              	66.21%
Bootstrap support for G3J4I4 as seed ortholog is 99%.
Bootstrap support for Q29N51 as seed ortholog is 99%.

Group of orthologs #1048. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 D.pseudoobscura:192

G3J3R2              	100.00%		Q29BN5              	100.00%
Bootstrap support for G3J3R2 as seed ortholog is 100%.
Bootstrap support for Q29BN5 as seed ortholog is 100%.

Group of orthologs #1049. Best score 192 bits
Score difference with first non-orthologous sequence - C.militaris:192 D.pseudoobscura:192

G3JKI7              	100.00%		Q29ET1              	100.00%
Bootstrap support for G3JKI7 as seed ortholog is 100%.
Bootstrap support for Q29ET1 as seed ortholog is 100%.

Group of orthologs #1050. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 D.pseudoobscura:191

G3J864              	100.00%		B5DN49              	100.00%
G3JQL0              	20.79%		Q29GY1              	28.80%
G3JCE7              	17.43%		Q295B3              	10.58%
G3JL69              	14.94%		
G3JPK2              	13.41%		
Bootstrap support for G3J864 as seed ortholog is 100%.
Bootstrap support for B5DN49 as seed ortholog is 100%.

Group of orthologs #1051. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 D.pseudoobscura:83

G3JM25              	100.00%		B5DXD9              	100.00%
G3JCH9              	5.47%		Q299Z5              	29.86%
                    	       		Q2M0I0              	17.03%
                    	       		Q2M0I1              	16.31%
                    	       		Q291C7              	14.75%
Bootstrap support for G3JM25 as seed ortholog is 100%.
Bootstrap support for B5DXD9 as seed ortholog is 95%.

Group of orthologs #1052. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:49

G3JF49              	100.00%		Q29I56              	100.00%
                    	       		Q29JR6              	35.21%
Bootstrap support for G3JF49 as seed ortholog is 97%.
Bootstrap support for Q29I56 as seed ortholog is 95%.

Group of orthologs #1053. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 D.pseudoobscura:191

G3JCB6              	100.00%		B5E1M2              	100.00%
Bootstrap support for G3JCB6 as seed ortholog is 100%.
Bootstrap support for B5E1M2 as seed ortholog is 100%.

Group of orthologs #1054. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 D.pseudoobscura:104

G3J7Z4              	100.00%		Q292W9              	100.00%
Bootstrap support for G3J7Z4 as seed ortholog is 100%.
Bootstrap support for Q292W9 as seed ortholog is 98%.

Group of orthologs #1055. Best score 191 bits
Score difference with first non-orthologous sequence - C.militaris:191 D.pseudoobscura:191

G3J3T0              	100.00%		Q29JM3              	100.00%
Bootstrap support for G3J3T0 as seed ortholog is 100%.
Bootstrap support for Q29JM3 as seed ortholog is 100%.

Group of orthologs #1056. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:190

G3J3G0              	100.00%		Q291N4              	100.00%
                    	       		B5DID4              	39.73%
                    	       		B5DY97              	32.52%
Bootstrap support for G3J3G0 as seed ortholog is 100%.
Bootstrap support for Q291N4 as seed ortholog is 100%.

Group of orthologs #1057. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:45

G3JKS8              	100.00%		Q28XM4              	100.00%
                    	       		Q28XM3              	59.90%
Bootstrap support for G3JKS8 as seed ortholog is 99%.
Bootstrap support for Q28XM4 as seed ortholog is 91%.

Group of orthologs #1058. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:190

G3J2P3              	100.00%		Q291B1              	100.00%
Bootstrap support for G3J2P3 as seed ortholog is 100%.
Bootstrap support for Q291B1 as seed ortholog is 100%.

Group of orthologs #1059. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:190

G3JA62              	100.00%		Q28WM9              	100.00%
Bootstrap support for G3JA62 as seed ortholog is 100%.
Bootstrap support for Q28WM9 as seed ortholog is 100%.

Group of orthologs #1060. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:190

G3J8W8              	100.00%		Q29A66              	100.00%
Bootstrap support for G3J8W8 as seed ortholog is 100%.
Bootstrap support for Q29A66 as seed ortholog is 100%.

Group of orthologs #1061. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:190

G3JIQ0              	100.00%		Q293K2              	100.00%
Bootstrap support for G3JIQ0 as seed ortholog is 100%.
Bootstrap support for Q293K2 as seed ortholog is 100%.

Group of orthologs #1062. Best score 190 bits
Score difference with first non-orthologous sequence - C.militaris:190 D.pseudoobscura:190

G3JKQ2              	100.00%		Q29IM3              	100.00%
Bootstrap support for G3JKQ2 as seed ortholog is 100%.
Bootstrap support for Q29IM3 as seed ortholog is 100%.

Group of orthologs #1063. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:107

G3JQX3              	100.00%		Q294N2              	100.00%
                    	       		Q29IV2              	35.97%
                    	       		B5DL90              	15.23%
Bootstrap support for G3JQX3 as seed ortholog is 97%.
Bootstrap support for Q294N2 as seed ortholog is 98%.

Group of orthologs #1064. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 D.pseudoobscura:189

G3JN59              	100.00%		Q29M14              	100.00%
                    	       		Q28YQ5              	7.43%
Bootstrap support for G3JN59 as seed ortholog is 100%.
Bootstrap support for Q29M14 as seed ortholog is 100%.

Group of orthologs #1065. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 D.pseudoobscura:189

G3JKM6              	100.00%		B5DVI6              	100.00%
Bootstrap support for G3JKM6 as seed ortholog is 100%.
Bootstrap support for B5DVI6 as seed ortholog is 100%.

Group of orthologs #1066. Best score 189 bits
Score difference with first non-orthologous sequence - C.militaris:189 D.pseudoobscura:52

G3JDS3              	100.00%		Q29N95              	100.00%
Bootstrap support for G3JDS3 as seed ortholog is 100%.
Bootstrap support for Q29N95 as seed ortholog is 14%.
Alternative seed ortholog is Q29C60 (52 bits away from this cluster)

Group of orthologs #1067. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 D.pseudoobscura:188

G3JCV4              	100.00%		B5DSC1              	100.00%
Bootstrap support for G3JCV4 as seed ortholog is 100%.
Bootstrap support for B5DSC1 as seed ortholog is 100%.

Group of orthologs #1068. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:90

G3JLE0              	100.00%		Q29AP4              	100.00%
Bootstrap support for G3JLE0 as seed ortholog is 98%.
Bootstrap support for Q29AP4 as seed ortholog is 99%.

Group of orthologs #1069. Best score 188 bits
Score difference with first non-orthologous sequence - C.militaris:188 D.pseudoobscura:188

G3JL86              	100.00%		Q2LYK8              	100.00%
Bootstrap support for G3JL86 as seed ortholog is 100%.
Bootstrap support for Q2LYK8 as seed ortholog is 100%.

Group of orthologs #1070. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 D.pseudoobscura:101

G3JA96              	100.00%		Q29B20              	100.00%
                    	       		B5DNH3              	67.31%
                    	       		Q29B21              	62.30%
                    	       		B5DXL8              	46.12%
                    	       		B5DYR4              	43.85%
                    	       		Q2LZY6              	43.53%
                    	       		Q29A09              	29.29%
                    	       		Q29C25              	25.08%
                    	       		Q29C24              	21.68%
Bootstrap support for G3JA96 as seed ortholog is 100%.
Bootstrap support for Q29B20 as seed ortholog is 99%.

Group of orthologs #1071. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 D.pseudoobscura:187

G3JPU5              	100.00%		B3XWN8              	100.00%
Bootstrap support for G3JPU5 as seed ortholog is 100%.
Bootstrap support for B3XWN8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 D.pseudoobscura:187

G3J3G6              	100.00%		Q29LK5              	100.00%
Bootstrap support for G3J3G6 as seed ortholog is 100%.
Bootstrap support for Q29LK5 as seed ortholog is 100%.

Group of orthologs #1073. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:187 D.pseudoobscura:187

G3JH05              	100.00%		Q295Q0              	100.00%
Bootstrap support for G3JH05 as seed ortholog is 100%.
Bootstrap support for Q295Q0 as seed ortholog is 100%.

Group of orthologs #1074. Best score 187 bits
Score difference with first non-orthologous sequence - C.militaris:17 D.pseudoobscura:34

G3JHW8              	100.00%		Q29DT5              	100.00%
Bootstrap support for G3JHW8 as seed ortholog is 74%.
Alternative seed ortholog is G3JH01 (17 bits away from this cluster)
Bootstrap support for Q29DT5 as seed ortholog is 76%.

Group of orthologs #1075. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:105

G3J2Z4              	100.00%		Q29E07              	100.00%
G3J8V3              	15.15%		
Bootstrap support for G3J2Z4 as seed ortholog is 100%.
Bootstrap support for Q29E07 as seed ortholog is 99%.

Group of orthologs #1076. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:47

G3JSL2              	100.00%		Q292Z1              	100.00%
                    	       		Q29KB8              	26.64%
Bootstrap support for G3JSL2 as seed ortholog is 94%.
Bootstrap support for Q292Z1 as seed ortholog is 85%.

Group of orthologs #1077. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:186

G3JPG2              	100.00%		Q29FH9              	100.00%
                    	       		B5E0F0              	14.57%
Bootstrap support for G3JPG2 as seed ortholog is 99%.
Bootstrap support for Q29FH9 as seed ortholog is 100%.

Group of orthologs #1078. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3J3G9              	100.00%		Q28X88              	100.00%
Bootstrap support for G3J3G9 as seed ortholog is 100%.
Bootstrap support for Q28X88 as seed ortholog is 100%.

Group of orthologs #1079. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3J315              	100.00%		Q291F7              	100.00%
Bootstrap support for G3J315 as seed ortholog is 100%.
Bootstrap support for Q291F7 as seed ortholog is 100%.

Group of orthologs #1080. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3J3T5              	100.00%		Q296D9              	100.00%
Bootstrap support for G3J3T5 as seed ortholog is 100%.
Bootstrap support for Q296D9 as seed ortholog is 100%.

Group of orthologs #1081. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3JM64              	100.00%		Q293C7              	100.00%
Bootstrap support for G3JM64 as seed ortholog is 100%.
Bootstrap support for Q293C7 as seed ortholog is 100%.

Group of orthologs #1082. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3J882              	100.00%		Q29ME9              	100.00%
Bootstrap support for G3J882 as seed ortholog is 100%.
Bootstrap support for Q29ME9 as seed ortholog is 100%.

Group of orthologs #1083. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3JF79              	100.00%		Q29FV5              	100.00%
Bootstrap support for G3JF79 as seed ortholog is 100%.
Bootstrap support for Q29FV5 as seed ortholog is 100%.

Group of orthologs #1084. Best score 186 bits
Score difference with first non-orthologous sequence - C.militaris:186 D.pseudoobscura:186

G3JS55              	100.00%		Q29BP8              	100.00%
Bootstrap support for G3JS55 as seed ortholog is 100%.
Bootstrap support for Q29BP8 as seed ortholog is 100%.

Group of orthologs #1085. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 D.pseudoobscura:185

G3JCW0              	100.00%		B5DHX4              	100.00%
Bootstrap support for G3JCW0 as seed ortholog is 100%.
Bootstrap support for B5DHX4 as seed ortholog is 100%.

Group of orthologs #1086. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 D.pseudoobscura:185

G3J488              	100.00%		Q29HA9              	100.00%
Bootstrap support for G3J488 as seed ortholog is 100%.
Bootstrap support for Q29HA9 as seed ortholog is 100%.

Group of orthologs #1087. Best score 185 bits
Score difference with first non-orthologous sequence - C.militaris:185 D.pseudoobscura:185

G3JQ26              	100.00%		Q2M0S5              	100.00%
Bootstrap support for G3JQ26 as seed ortholog is 100%.
Bootstrap support for Q2M0S5 as seed ortholog is 100%.

Group of orthologs #1088. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:183

G3J8M1              	100.00%		Q28XM1              	100.00%
Bootstrap support for G3J8M1 as seed ortholog is 99%.
Bootstrap support for Q28XM1 as seed ortholog is 100%.

Group of orthologs #1089. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:52

G3JD94              	100.00%		Q296G6              	100.00%
Bootstrap support for G3JD94 as seed ortholog is 99%.
Bootstrap support for Q296G6 as seed ortholog is 99%.

Group of orthologs #1090. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 D.pseudoobscura:183

G3JQD6              	100.00%		Q292B4              	100.00%
Bootstrap support for G3JQD6 as seed ortholog is 100%.
Bootstrap support for Q292B4 as seed ortholog is 100%.

Group of orthologs #1091. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 D.pseudoobscura:183

G3JNP5              	100.00%		Q29HM2              	100.00%
Bootstrap support for G3JNP5 as seed ortholog is 100%.
Bootstrap support for Q29HM2 as seed ortholog is 100%.

Group of orthologs #1092. Best score 183 bits
Score difference with first non-orthologous sequence - C.militaris:183 D.pseudoobscura:183

G3JMB4              	100.00%		Q2LZH7              	100.00%
Bootstrap support for G3JMB4 as seed ortholog is 100%.
Bootstrap support for Q2LZH7 as seed ortholog is 100%.

Group of orthologs #1093. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 D.pseudoobscura:182

G3JFY8              	100.00%		Q28XN8              	100.00%
                    	       		Q28XN7              	28.45%
                    	       		Q29KU9              	25.35%
                    	       		Q28XN9              	24.37%
Bootstrap support for G3JFY8 as seed ortholog is 100%.
Bootstrap support for Q28XN8 as seed ortholog is 100%.

Group of orthologs #1094. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 D.pseudoobscura:182

G3J4L8              	100.00%		B5DVF5              	100.00%
                    	       		B5DQL4              	78.76%
Bootstrap support for G3J4L8 as seed ortholog is 100%.
Bootstrap support for B5DVF5 as seed ortholog is 100%.

Group of orthologs #1095. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:182

G3JTX0              	100.00%		Q29B22              	100.00%
                    	       		Q29BH1              	22.32%
Bootstrap support for G3JTX0 as seed ortholog is 99%.
Bootstrap support for Q29B22 as seed ortholog is 100%.

Group of orthologs #1096. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 D.pseudoobscura:182

G3JGB6              	100.00%		Q293J9              	100.00%
Bootstrap support for G3JGB6 as seed ortholog is 100%.
Bootstrap support for Q293J9 as seed ortholog is 100%.

Group of orthologs #1097. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 D.pseudoobscura:182

G3J3U6              	100.00%		Q2LYT2              	100.00%
Bootstrap support for G3J3U6 as seed ortholog is 100%.
Bootstrap support for Q2LYT2 as seed ortholog is 100%.

Group of orthologs #1098. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:29 D.pseudoobscura:182

G3JE96              	100.00%		Q29H29              	100.00%
Bootstrap support for G3JE96 as seed ortholog is 66%.
Alternative seed ortholog is G3JI70 (29 bits away from this cluster)
Bootstrap support for Q29H29 as seed ortholog is 100%.

Group of orthologs #1099. Best score 182 bits
Score difference with first non-orthologous sequence - C.militaris:182 D.pseudoobscura:182

G3JD96              	100.00%		Q29L15              	100.00%
Bootstrap support for G3JD96 as seed ortholog is 100%.
Bootstrap support for Q29L15 as seed ortholog is 100%.

Group of orthologs #1100. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:87

G3JHQ5              	100.00%		B5DWY3              	100.00%
                    	       		Q292N0              	13.92%
Bootstrap support for G3JHQ5 as seed ortholog is 98%.
Bootstrap support for B5DWY3 as seed ortholog is 99%.

Group of orthologs #1101. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:47

G3J932              	100.00%		Q296Z5              	100.00%
                    	       		B5DNC4              	37.31%
Bootstrap support for G3J932 as seed ortholog is 100%.
Bootstrap support for Q296Z5 as seed ortholog is 95%.

Group of orthologs #1102. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JBT5              	100.00%		Q290G0              	100.00%
Bootstrap support for G3JBT5 as seed ortholog is 100%.
Bootstrap support for Q290G0 as seed ortholog is 100%.

Group of orthologs #1103. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JTM8              	100.00%		B5DPD8              	100.00%
Bootstrap support for G3JTM8 as seed ortholog is 100%.
Bootstrap support for B5DPD8 as seed ortholog is 100%.

Group of orthologs #1104. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JMB7              	100.00%		Q28ZP0              	100.00%
Bootstrap support for G3JMB7 as seed ortholog is 100%.
Bootstrap support for Q28ZP0 as seed ortholog is 100%.

Group of orthologs #1105. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:27

G3J8A8              	100.00%		Q29NY9              	100.00%
Bootstrap support for G3J8A8 as seed ortholog is 100%.
Bootstrap support for Q29NY9 as seed ortholog is 66%.
Alternative seed ortholog is Q29K06 (27 bits away from this cluster)

Group of orthologs #1106. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:116

G3JQ15              	100.00%		Q293V6              	100.00%
Bootstrap support for G3JQ15 as seed ortholog is 100%.
Bootstrap support for Q293V6 as seed ortholog is 100%.

Group of orthologs #1107. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:48

G3JNN9              	100.00%		Q298M4              	100.00%
Bootstrap support for G3JNN9 as seed ortholog is 100%.
Bootstrap support for Q298M4 as seed ortholog is 99%.

Group of orthologs #1108. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JKU1              	100.00%		Q29CL8              	100.00%
Bootstrap support for G3JKU1 as seed ortholog is 100%.
Bootstrap support for Q29CL8 as seed ortholog is 100%.

Group of orthologs #1109. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JL31              	100.00%		Q29CL6              	100.00%
Bootstrap support for G3JL31 as seed ortholog is 100%.
Bootstrap support for Q29CL6 as seed ortholog is 100%.

Group of orthologs #1110. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JFK5              	100.00%		Q29LB3              	100.00%
Bootstrap support for G3JFK5 as seed ortholog is 100%.
Bootstrap support for Q29LB3 as seed ortholog is 100%.

Group of orthologs #1111. Best score 181 bits
Score difference with first non-orthologous sequence - C.militaris:181 D.pseudoobscura:181

G3JDL1              	100.00%		Q29PF6              	100.00%
Bootstrap support for G3JDL1 as seed ortholog is 100%.
Bootstrap support for Q29PF6 as seed ortholog is 100%.

Group of orthologs #1112. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JHG2              	100.00%		Q2LYQ7              	100.00%
                    	       		Q29EA1              	11.68%
                    	       		Q294F1              	11.11%
Bootstrap support for G3JHG2 as seed ortholog is 100%.
Bootstrap support for Q2LYQ7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3J2T7              	100.00%		B5DRX9              	100.00%
Bootstrap support for G3J2T7 as seed ortholog is 100%.
Bootstrap support for B5DRX9 as seed ortholog is 100%.

Group of orthologs #1114. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3J3R1              	100.00%		Q29DC3              	100.00%
Bootstrap support for G3J3R1 as seed ortholog is 100%.
Bootstrap support for Q29DC3 as seed ortholog is 100%.

Group of orthologs #1115. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JN40              	100.00%		Q291S7              	100.00%
Bootstrap support for G3JN40 as seed ortholog is 100%.
Bootstrap support for Q291S7 as seed ortholog is 100%.

Group of orthologs #1116. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JKQ1              	100.00%		Q298L0              	100.00%
Bootstrap support for G3JKQ1 as seed ortholog is 100%.
Bootstrap support for Q298L0 as seed ortholog is 100%.

Group of orthologs #1117. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JQ46              	100.00%		Q297N6              	100.00%
Bootstrap support for G3JQ46 as seed ortholog is 100%.
Bootstrap support for Q297N6 as seed ortholog is 100%.

Group of orthologs #1118. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JR17              	100.00%		Q296V7              	100.00%
Bootstrap support for G3JR17 as seed ortholog is 100%.
Bootstrap support for Q296V7 as seed ortholog is 100%.

Group of orthologs #1119. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JJU3              	100.00%		Q29HV4              	100.00%
Bootstrap support for G3JJU3 as seed ortholog is 100%.
Bootstrap support for Q29HV4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 180 bits
Score difference with first non-orthologous sequence - C.militaris:180 D.pseudoobscura:180

G3JBU5              	100.00%		Q2M144              	100.00%
Bootstrap support for G3JBU5 as seed ortholog is 100%.
Bootstrap support for Q2M144 as seed ortholog is 100%.

Group of orthologs #1121. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:24 D.pseudoobscura:109

G3JNF1              	100.00%		B5DVX7              	100.00%
                    	       		B5DWK7              	56.30%
Bootstrap support for G3JNF1 as seed ortholog is 75%.
Bootstrap support for B5DVX7 as seed ortholog is 99%.

Group of orthologs #1122. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 D.pseudoobscura:179

G3J8G6              	100.00%		Q296G1              	100.00%
Bootstrap support for G3J8G6 as seed ortholog is 100%.
Bootstrap support for Q296G1 as seed ortholog is 100%.

Group of orthologs #1123. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 D.pseudoobscura:179

G3JF74              	100.00%		Q290T9              	100.00%
Bootstrap support for G3JF74 as seed ortholog is 100%.
Bootstrap support for Q290T9 as seed ortholog is 100%.

Group of orthologs #1124. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:130

G3JGV5              	100.00%		Q293E8              	100.00%
Bootstrap support for G3JGV5 as seed ortholog is 97%.
Bootstrap support for Q293E8 as seed ortholog is 99%.

Group of orthologs #1125. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 D.pseudoobscura:110

G3JFJ1              	100.00%		Q29G73              	100.00%
Bootstrap support for G3JFJ1 as seed ortholog is 100%.
Bootstrap support for Q29G73 as seed ortholog is 99%.

Group of orthologs #1126. Best score 179 bits
Score difference with first non-orthologous sequence - C.militaris:179 D.pseudoobscura:179

G3JLT0              	100.00%		Q29K52              	100.00%
Bootstrap support for G3JLT0 as seed ortholog is 100%.
Bootstrap support for Q29K52 as seed ortholog is 100%.

Group of orthologs #1127. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:178

G3JNF0              	100.00%		Q290V9              	100.00%
G3JH24              	53.98%		Q290W0              	39.64%
G3J2W8              	44.21%		Q290V8              	35.88%
Bootstrap support for G3JNF0 as seed ortholog is 92%.
Bootstrap support for Q290V9 as seed ortholog is 100%.

Group of orthologs #1128. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 D.pseudoobscura:119

G3J380              	100.00%		Q29GE0              	100.00%
Bootstrap support for G3J380 as seed ortholog is 100%.
Bootstrap support for Q29GE0 as seed ortholog is 96%.

Group of orthologs #1129. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 D.pseudoobscura:178

G3JE57              	100.00%		Q29I28              	100.00%
Bootstrap support for G3JE57 as seed ortholog is 100%.
Bootstrap support for Q29I28 as seed ortholog is 100%.

Group of orthologs #1130. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 D.pseudoobscura:178

G3JTM1              	100.00%		Q28ZE6              	100.00%
Bootstrap support for G3JTM1 as seed ortholog is 100%.
Bootstrap support for Q28ZE6 as seed ortholog is 100%.

Group of orthologs #1131. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 D.pseudoobscura:65

G3JAL6              	100.00%		Q95086              	100.00%
Bootstrap support for G3JAL6 as seed ortholog is 100%.
Bootstrap support for Q95086 as seed ortholog is 99%.

Group of orthologs #1132. Best score 178 bits
Score difference with first non-orthologous sequence - C.militaris:178 D.pseudoobscura:126

G3JFN5              	100.00%		Q2LZR5              	100.00%
Bootstrap support for G3JFN5 as seed ortholog is 100%.
Bootstrap support for Q2LZR5 as seed ortholog is 100%.

Group of orthologs #1133. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:60

G3JSY3              	100.00%		Q291H8              	100.00%
G3J8W1              	14.32%		
G3JI95              	8.89%		
G3JFJ4              	7.38%		
G3J2N2              	6.83%		
G3JK67              	5.97%		
Bootstrap support for G3JSY3 as seed ortholog is 86%.
Bootstrap support for Q291H8 as seed ortholog is 88%.

Group of orthologs #1134. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 D.pseudoobscura:177

G3JS46              	100.00%		Q29DS4              	100.00%
                    	       		Q294L1              	72.47%
Bootstrap support for G3JS46 as seed ortholog is 100%.
Bootstrap support for Q29DS4 as seed ortholog is 100%.

Group of orthologs #1135. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 D.pseudoobscura:177

G3JLE9              	100.00%		B5DPF1              	100.00%
Bootstrap support for G3JLE9 as seed ortholog is 100%.
Bootstrap support for B5DPF1 as seed ortholog is 100%.

Group of orthologs #1136. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 D.pseudoobscura:177

G3J5T9              	100.00%		Q295G6              	100.00%
Bootstrap support for G3J5T9 as seed ortholog is 100%.
Bootstrap support for Q295G6 as seed ortholog is 100%.

Group of orthologs #1137. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:32 D.pseudoobscura:100

G3JGH0              	100.00%		Q28XV6              	100.00%
Bootstrap support for G3JGH0 as seed ortholog is 76%.
Bootstrap support for Q28XV6 as seed ortholog is 98%.

Group of orthologs #1138. Best score 177 bits
Score difference with first non-orthologous sequence - C.militaris:177 D.pseudoobscura:90

G3JQ42              	100.00%		Q29IK7              	100.00%
Bootstrap support for G3JQ42 as seed ortholog is 100%.
Bootstrap support for Q29IK7 as seed ortholog is 99%.

Group of orthologs #1139. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 D.pseudoobscura:66

G3JB38              	100.00%		Q29CI8              	100.00%
                    	       		B5DVK4              	58.86%
                    	       		B5DVK3              	52.53%
                    	       		Q28XZ2              	44.94%
                    	       		B5DS78              	28.48%
Bootstrap support for G3JB38 as seed ortholog is 100%.
Bootstrap support for Q29CI8 as seed ortholog is 99%.

Group of orthologs #1140. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 D.pseudoobscura:176

G3JRA7              	100.00%		B5DS74              	100.00%
                    	       		Q29PG3              	89.57%
Bootstrap support for G3JRA7 as seed ortholog is 100%.
Bootstrap support for B5DS74 as seed ortholog is 100%.

Group of orthologs #1141. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:176 D.pseudoobscura:176

G3JA03              	100.00%		Q295N3              	100.00%
Bootstrap support for G3JA03 as seed ortholog is 100%.
Bootstrap support for Q295N3 as seed ortholog is 100%.

Group of orthologs #1142. Best score 176 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:99

G3JNX3              	100.00%		Q29N71              	100.00%
Bootstrap support for G3JNX3 as seed ortholog is 99%.
Bootstrap support for Q29N71 as seed ortholog is 99%.

Group of orthologs #1143. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JQE8              	100.00%		Q29E61              	100.00%
                    	       		Q29DC5              	12.48%
                    	       		Q29E62              	12.12%
Bootstrap support for G3JQE8 as seed ortholog is 100%.
Bootstrap support for Q29E61 as seed ortholog is 100%.

Group of orthologs #1144. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:54

G3JKQ0              	100.00%		Q29EE6              	100.00%
                    	       		B5DMF9              	39.42%
Bootstrap support for G3JKQ0 as seed ortholog is 85%.
Bootstrap support for Q29EE6 as seed ortholog is 92%.

Group of orthologs #1145. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JCV1              	100.00%		B5DLV7              	100.00%
Bootstrap support for G3JCV1 as seed ortholog is 100%.
Bootstrap support for B5DLV7 as seed ortholog is 100%.

Group of orthologs #1146. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JUM8              	100.00%		B5DPY6              	100.00%
Bootstrap support for G3JUM8 as seed ortholog is 100%.
Bootstrap support for B5DPY6 as seed ortholog is 100%.

Group of orthologs #1147. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JD77              	100.00%		Q29DL9              	100.00%
Bootstrap support for G3JD77 as seed ortholog is 100%.
Bootstrap support for Q29DL9 as seed ortholog is 100%.

Group of orthologs #1148. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JA33              	100.00%		Q29N52              	100.00%
Bootstrap support for G3JA33 as seed ortholog is 100%.
Bootstrap support for Q29N52 as seed ortholog is 100%.

Group of orthologs #1149. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JNS6              	100.00%		Q299Q5              	100.00%
Bootstrap support for G3JNS6 as seed ortholog is 100%.
Bootstrap support for Q299Q5 as seed ortholog is 100%.

Group of orthologs #1150. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:175 D.pseudoobscura:175

G3JEZ2              	100.00%		Q29L20              	100.00%
Bootstrap support for G3JEZ2 as seed ortholog is 100%.
Bootstrap support for Q29L20 as seed ortholog is 100%.

Group of orthologs #1151. Best score 175 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:88

G3JQ91              	100.00%		Q29H71              	100.00%
Bootstrap support for G3JQ91 as seed ortholog is 98%.
Bootstrap support for Q29H71 as seed ortholog is 99%.

Group of orthologs #1152. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:2

G3J351              	100.00%		Q29JX9              	100.00%
Bootstrap support for G3J351 as seed ortholog is 100%.
Bootstrap support for Q29JX9 as seed ortholog is 69%.
Alternative seed ortholog is B5DXX9 (2 bits away from this cluster)

Group of orthologs #1153. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 D.pseudoobscura:174

G3JMP3              	100.00%		Q2M045              	100.00%
Bootstrap support for G3JMP3 as seed ortholog is 100%.
Bootstrap support for Q2M045 as seed ortholog is 100%.

Group of orthologs #1154. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:174 D.pseudoobscura:174

G3JSH5              	100.00%		Q29LY9              	100.00%
Bootstrap support for G3JSH5 as seed ortholog is 100%.
Bootstrap support for Q29LY9 as seed ortholog is 100%.

Group of orthologs #1155. Best score 174 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:81

G3JRH8              	100.00%		Q2LZ68              	100.00%
Bootstrap support for G3JRH8 as seed ortholog is 99%.
Bootstrap support for Q2LZ68 as seed ortholog is 99%.

Group of orthologs #1156. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:26 D.pseudoobscura:27

G3J5L8              	100.00%		B5DZN2              	100.00%
                    	       		B5E1J6              	17.94%
                    	       		Q28ZD8              	17.81%
Bootstrap support for G3J5L8 as seed ortholog is 72%.
Alternative seed ortholog is G3JV34 (26 bits away from this cluster)
Bootstrap support for B5DZN2 as seed ortholog is 67%.
Alternative seed ortholog is Q28ZW2 (27 bits away from this cluster)

Group of orthologs #1157. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 D.pseudoobscura:173

G3J9M4              	100.00%		Q299S6              	100.00%
Bootstrap support for G3J9M4 as seed ortholog is 100%.
Bootstrap support for Q299S6 as seed ortholog is 100%.

Group of orthologs #1158. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 D.pseudoobscura:173

G3JI48              	100.00%		Q294L3              	100.00%
Bootstrap support for G3JI48 as seed ortholog is 100%.
Bootstrap support for Q294L3 as seed ortholog is 100%.

Group of orthologs #1159. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 D.pseudoobscura:173

G3JD97              	100.00%		Q29E53              	100.00%
Bootstrap support for G3JD97 as seed ortholog is 100%.
Bootstrap support for Q29E53 as seed ortholog is 100%.

Group of orthologs #1160. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 D.pseudoobscura:173

G3J3U1              	100.00%		Q2LYS2              	100.00%
Bootstrap support for G3J3U1 as seed ortholog is 100%.
Bootstrap support for Q2LYS2 as seed ortholog is 100%.

Group of orthologs #1161. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 D.pseudoobscura:173

G3JPS8              	100.00%		Q292E8              	100.00%
Bootstrap support for G3JPS8 as seed ortholog is 100%.
Bootstrap support for Q292E8 as seed ortholog is 100%.

Group of orthologs #1162. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:61

G3JD90              	100.00%		Q29M32              	100.00%
Bootstrap support for G3JD90 as seed ortholog is 96%.
Bootstrap support for Q29M32 as seed ortholog is 95%.

Group of orthologs #1163. Best score 173 bits
Score difference with first non-orthologous sequence - C.militaris:173 D.pseudoobscura:173

G3JUK5              	100.00%		Q29IN0              	100.00%
Bootstrap support for G3JUK5 as seed ortholog is 100%.
Bootstrap support for Q29IN0 as seed ortholog is 100%.

Group of orthologs #1164. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 D.pseudoobscura:97

G3JIS5              	100.00%		Q29E69              	100.00%
G3J4M9              	22.13%		B5DWP3              	59.08%
                    	       		B5DR54              	32.51%
                    	       		B5DK99              	19.06%
Bootstrap support for G3JIS5 as seed ortholog is 100%.
Bootstrap support for Q29E69 as seed ortholog is 98%.

Group of orthologs #1165. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 D.pseudoobscura:172

G3JIF2              	100.00%		Q294H1              	100.00%
Bootstrap support for G3JIF2 as seed ortholog is 100%.
Bootstrap support for Q294H1 as seed ortholog is 100%.

Group of orthologs #1166. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 D.pseudoobscura:92

G3J8F2              	100.00%		Q29KH1              	100.00%
Bootstrap support for G3J8F2 as seed ortholog is 100%.
Bootstrap support for Q29KH1 as seed ortholog is 99%.

Group of orthologs #1167. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:72

G3J9Y8              	100.00%		Q2M105              	100.00%
Bootstrap support for G3J9Y8 as seed ortholog is 99%.
Bootstrap support for Q2M105 as seed ortholog is 98%.

Group of orthologs #1168. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 D.pseudoobscura:172

G3JTF0              	100.00%		Q296T6              	100.00%
Bootstrap support for G3JTF0 as seed ortholog is 100%.
Bootstrap support for Q296T6 as seed ortholog is 100%.

Group of orthologs #1169. Best score 172 bits
Score difference with first non-orthologous sequence - C.militaris:172 D.pseudoobscura:172

G3JRG9              	100.00%		Q2M0U1              	100.00%
Bootstrap support for G3JRG9 as seed ortholog is 100%.
Bootstrap support for Q2M0U1 as seed ortholog is 100%.

Group of orthologs #1170. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3JFE3              	100.00%		Q291H4              	100.00%
                    	       		Q297F5              	36.34%
Bootstrap support for G3JFE3 as seed ortholog is 100%.
Bootstrap support for Q291H4 as seed ortholog is 100%.

Group of orthologs #1171. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3J754              	100.00%		Q28X32              	100.00%
Bootstrap support for G3J754 as seed ortholog is 100%.
Bootstrap support for Q28X32 as seed ortholog is 100%.

Group of orthologs #1172. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3JKV7              	100.00%		B5DR31              	100.00%
Bootstrap support for G3JKV7 as seed ortholog is 100%.
Bootstrap support for B5DR31 as seed ortholog is 100%.

Group of orthologs #1173. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3J8W5              	100.00%		Q28ZJ3              	100.00%
Bootstrap support for G3J8W5 as seed ortholog is 100%.
Bootstrap support for Q28ZJ3 as seed ortholog is 100%.

Group of orthologs #1174. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3JQW1              	100.00%		B5DPM6              	100.00%
Bootstrap support for G3JQW1 as seed ortholog is 100%.
Bootstrap support for B5DPM6 as seed ortholog is 100%.

Group of orthologs #1175. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3J3L9              	100.00%		Q2M016              	100.00%
Bootstrap support for G3J3L9 as seed ortholog is 100%.
Bootstrap support for Q2M016 as seed ortholog is 100%.

Group of orthologs #1176. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3JUA3              	100.00%		P22673              	100.00%
Bootstrap support for G3JUA3 as seed ortholog is 100%.
Bootstrap support for P22673 as seed ortholog is 100%.

Group of orthologs #1177. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3JDZ5              	100.00%		Q29IW9              	100.00%
Bootstrap support for G3JDZ5 as seed ortholog is 100%.
Bootstrap support for Q29IW9 as seed ortholog is 100%.

Group of orthologs #1178. Best score 171 bits
Score difference with first non-orthologous sequence - C.militaris:171 D.pseudoobscura:171

G3JUF7              	100.00%		Q29KH7              	100.00%
Bootstrap support for G3JUF7 as seed ortholog is 100%.
Bootstrap support for Q29KH7 as seed ortholog is 100%.

Group of orthologs #1179. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 D.pseudoobscura:170

G3JC61              	100.00%		Q29HQ7              	100.00%
                    	       		Q29ES3              	44.09%
                    	       		B5DH98              	28.98%
Bootstrap support for G3JC61 as seed ortholog is 100%.
Bootstrap support for Q29HQ7 as seed ortholog is 100%.

Group of orthologs #1180. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 D.pseudoobscura:170

G3J3S6              	100.00%		B5DUL5              	100.00%
                    	       		B5DNJ2              	58.57%
Bootstrap support for G3J3S6 as seed ortholog is 100%.
Bootstrap support for B5DUL5 as seed ortholog is 100%.

Group of orthologs #1181. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:97

G3JU32              	100.00%		Q29MV4              	100.00%
                    	       		Q29MV5              	16.06%
Bootstrap support for G3JU32 as seed ortholog is 98%.
Bootstrap support for Q29MV4 as seed ortholog is 99%.

Group of orthologs #1182. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:170 D.pseudoobscura:170

G3JH50              	100.00%		Q293X3              	100.00%
Bootstrap support for G3JH50 as seed ortholog is 100%.
Bootstrap support for Q293X3 as seed ortholog is 100%.

Group of orthologs #1183. Best score 170 bits
Score difference with first non-orthologous sequence - C.militaris:29 D.pseudoobscura:170

G3JTR2              	100.00%		Q28Z17              	100.00%
Bootstrap support for G3JTR2 as seed ortholog is 94%.
Bootstrap support for Q28Z17 as seed ortholog is 100%.

Group of orthologs #1184. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 D.pseudoobscura:169

G3JL25              	100.00%		Q29EG7              	100.00%
                    	       		B5DRL2              	23.68%
Bootstrap support for G3JL25 as seed ortholog is 100%.
Bootstrap support for Q29EG7 as seed ortholog is 100%.

Group of orthologs #1185. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 D.pseudoobscura:169

G3JD32              	100.00%		Q290P6              	100.00%
Bootstrap support for G3JD32 as seed ortholog is 100%.
Bootstrap support for Q290P6 as seed ortholog is 100%.

Group of orthologs #1186. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:169 D.pseudoobscura:169

G3JQJ6              	100.00%		Q29KG3              	100.00%
Bootstrap support for G3JQJ6 as seed ortholog is 100%.
Bootstrap support for Q29KG3 as seed ortholog is 100%.

Group of orthologs #1187. Best score 169 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:55

G3JK88              	100.00%		Q2M0M1              	100.00%
Bootstrap support for G3JK88 as seed ortholog is 99%.
Bootstrap support for Q2M0M1 as seed ortholog is 98%.

Group of orthologs #1188. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:168

G3JE08              	100.00%		B5DIJ6              	100.00%
Bootstrap support for G3JE08 as seed ortholog is 100%.
Bootstrap support for B5DIJ6 as seed ortholog is 100%.

Group of orthologs #1189. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:168

G3JEL5              	100.00%		B5DQY7              	100.00%
Bootstrap support for G3JEL5 as seed ortholog is 99%.
Bootstrap support for B5DQY7 as seed ortholog is 100%.

Group of orthologs #1190. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:82

G3J2L7              	100.00%		Q294B2              	100.00%
Bootstrap support for G3J2L7 as seed ortholog is 100%.
Bootstrap support for Q294B2 as seed ortholog is 98%.

Group of orthologs #1191. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:168

G3J2S6              	100.00%		Q294R1              	100.00%
Bootstrap support for G3J2S6 as seed ortholog is 100%.
Bootstrap support for Q294R1 as seed ortholog is 100%.

Group of orthologs #1192. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:168

G3JII3              	100.00%		Q28XW5              	100.00%
Bootstrap support for G3JII3 as seed ortholog is 100%.
Bootstrap support for Q28XW5 as seed ortholog is 100%.

Group of orthologs #1193. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:168

G3JJP0              	100.00%		Q29FH3              	100.00%
Bootstrap support for G3JJP0 as seed ortholog is 100%.
Bootstrap support for Q29FH3 as seed ortholog is 100%.

Group of orthologs #1194. Best score 168 bits
Score difference with first non-orthologous sequence - C.militaris:168 D.pseudoobscura:168

G3JQS7              	100.00%		Q29EP0              	100.00%
Bootstrap support for G3JQS7 as seed ortholog is 100%.
Bootstrap support for Q29EP0 as seed ortholog is 100%.

Group of orthologs #1195. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 D.pseudoobscura:167

G3J451              	100.00%		B5E1K1              	100.00%
Bootstrap support for G3J451 as seed ortholog is 100%.
Bootstrap support for B5E1K1 as seed ortholog is 100%.

Group of orthologs #1196. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 D.pseudoobscura:167

G3JDQ9              	100.00%		Q292D0              	100.00%
Bootstrap support for G3JDQ9 as seed ortholog is 100%.
Bootstrap support for Q292D0 as seed ortholog is 100%.

Group of orthologs #1197. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 D.pseudoobscura:167

G3JGQ9              	100.00%		Q29G82              	100.00%
Bootstrap support for G3JGQ9 as seed ortholog is 100%.
Bootstrap support for Q29G82 as seed ortholog is 100%.

Group of orthologs #1198. Best score 167 bits
Score difference with first non-orthologous sequence - C.militaris:167 D.pseudoobscura:167

G3JEN8              	100.00%		Q29N40              	100.00%
Bootstrap support for G3JEN8 as seed ortholog is 100%.
Bootstrap support for Q29N40 as seed ortholog is 100%.

Group of orthologs #1199. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 D.pseudoobscura:69

G3JDB4              	100.00%		B5DKQ8              	100.00%
                    	       		B5DKQ7              	10.87%
                    	       		B5DXR9              	6.44%
Bootstrap support for G3JDB4 as seed ortholog is 100%.
Bootstrap support for B5DKQ8 as seed ortholog is 94%.

Group of orthologs #1200. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 D.pseudoobscura:166

G3JLA4              	100.00%		Q292Z9              	100.00%
Bootstrap support for G3JLA4 as seed ortholog is 100%.
Bootstrap support for Q292Z9 as seed ortholog is 100%.

Group of orthologs #1201. Best score 166 bits
Score difference with first non-orthologous sequence - C.militaris:166 D.pseudoobscura:77

G3JKL3              	100.00%		Q29DY8              	100.00%
Bootstrap support for G3JKL3 as seed ortholog is 100%.
Bootstrap support for Q29DY8 as seed ortholog is 98%.

Group of orthologs #1202. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:34 D.pseudoobscura:9

G3JPF4              	100.00%		B5E0C7              	100.00%
                    	       		B5E0C8              	92.01%
                    	       		Q28Y23              	89.05%
                    	       		Q28Y22              	53.55%
                    	       		Q28Y91              	42.90%
                    	       		Q28Y20              	22.78%
                    	       		Q28Y27              	5.92%
Bootstrap support for G3JPF4 as seed ortholog is 81%.
Bootstrap support for B5E0C7 as seed ortholog is 48%.
Alternative seed ortholog is B5DZF5 (9 bits away from this cluster)

Group of orthologs #1203. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:74

G3JDA8              	100.00%		B5DL93              	100.00%
G3JAZ1              	61.70%		B5DW67              	80.30%
Bootstrap support for G3JDA8 as seed ortholog is 100%.
Bootstrap support for B5DL93 as seed ortholog is 99%.

Group of orthologs #1204. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:10

G3JB05              	100.00%		Q29MC6              	100.00%
                    	       		Q29JR8              	22.61%
Bootstrap support for G3JB05 as seed ortholog is 97%.
Bootstrap support for Q29MC6 as seed ortholog is 63%.
Alternative seed ortholog is B5DZF5 (10 bits away from this cluster)

Group of orthologs #1205. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:165

G3J395              	100.00%		Q299A3              	100.00%
Bootstrap support for G3J395 as seed ortholog is 100%.
Bootstrap support for Q299A3 as seed ortholog is 100%.

Group of orthologs #1206. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:165

G3JT35              	100.00%		I7M6Z1              	100.00%
Bootstrap support for G3JT35 as seed ortholog is 100%.
Bootstrap support for I7M6Z1 as seed ortholog is 100%.

Group of orthologs #1207. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:165

G3JCQ3              	100.00%		Q29I09              	100.00%
Bootstrap support for G3JCQ3 as seed ortholog is 100%.
Bootstrap support for Q29I09 as seed ortholog is 100%.

Group of orthologs #1208. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:165

G3JLB9              	100.00%		Q298I9              	100.00%
Bootstrap support for G3JLB9 as seed ortholog is 100%.
Bootstrap support for Q298I9 as seed ortholog is 100%.

Group of orthologs #1209. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:41 D.pseudoobscura:111

G3JT31              	100.00%		Q291I1              	100.00%
Bootstrap support for G3JT31 as seed ortholog is 82%.
Bootstrap support for Q291I1 as seed ortholog is 99%.

Group of orthologs #1210. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:165

G3JIF4              	100.00%		Q29FT5              	100.00%
Bootstrap support for G3JIF4 as seed ortholog is 100%.
Bootstrap support for Q29FT5 as seed ortholog is 100%.

Group of orthologs #1211. Best score 165 bits
Score difference with first non-orthologous sequence - C.militaris:165 D.pseudoobscura:165

G3JM39              	100.00%		Q29MM8              	100.00%
Bootstrap support for G3JM39 as seed ortholog is 100%.
Bootstrap support for Q29MM8 as seed ortholog is 100%.

Group of orthologs #1212. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:110

G3JLP0              	100.00%		Q296B6              	100.00%
                    	       		B5DIT9              	18.37%
                    	       		B5DHN3              	10.76%
Bootstrap support for G3JLP0 as seed ortholog is 100%.
Bootstrap support for Q296B6 as seed ortholog is 99%.

Group of orthologs #1213. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:164

G3JJ74              	100.00%		Q297M0              	100.00%
                    	       		B5DJW7              	9.69%
Bootstrap support for G3JJ74 as seed ortholog is 100%.
Bootstrap support for Q297M0 as seed ortholog is 100%.

Group of orthologs #1214. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:164

G3JA00              	100.00%		I5AMM9              	100.00%
Bootstrap support for G3JA00 as seed ortholog is 100%.
Bootstrap support for I5AMM9 as seed ortholog is 100%.

Group of orthologs #1215. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:164

G3J6I9              	100.00%		Q29JW7              	100.00%
Bootstrap support for G3J6I9 as seed ortholog is 97%.
Bootstrap support for Q29JW7 as seed ortholog is 100%.

Group of orthologs #1216. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:164

G3J6A0              	100.00%		Q29PD5              	100.00%
Bootstrap support for G3J6A0 as seed ortholog is 100%.
Bootstrap support for Q29PD5 as seed ortholog is 100%.

Group of orthologs #1217. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:164

G3JHY6              	100.00%		Q29M52              	100.00%
Bootstrap support for G3JHY6 as seed ortholog is 100%.
Bootstrap support for Q29M52 as seed ortholog is 100%.

Group of orthologs #1218. Best score 164 bits
Score difference with first non-orthologous sequence - C.militaris:164 D.pseudoobscura:164

G3JMR7              	100.00%		Q29K21              	100.00%
Bootstrap support for G3JMR7 as seed ortholog is 100%.
Bootstrap support for Q29K21 as seed ortholog is 100%.

Group of orthologs #1219. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:116

G3J7J0              	100.00%		B5DZT2              	100.00%
                    	       		Q29BG6              	64.06%
Bootstrap support for G3J7J0 as seed ortholog is 99%.
Bootstrap support for B5DZT2 as seed ortholog is 99%.

Group of orthologs #1220. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:39 D.pseudoobscura:163

G3JAV5              	100.00%		Q29DY6              	100.00%
G3JPH1              	11.56%		
Bootstrap support for G3JAV5 as seed ortholog is 84%.
Bootstrap support for Q29DY6 as seed ortholog is 100%.

Group of orthologs #1221. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 D.pseudoobscura:163

G3JT32              	100.00%		Q294C0              	100.00%
G3JJK6              	34.11%		
Bootstrap support for G3JT32 as seed ortholog is 100%.
Bootstrap support for Q294C0 as seed ortholog is 100%.

Group of orthologs #1222. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 D.pseudoobscura:113

G3JDT5              	100.00%		B5DQC6              	100.00%
Bootstrap support for G3JDT5 as seed ortholog is 100%.
Bootstrap support for B5DQC6 as seed ortholog is 99%.

Group of orthologs #1223. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:98 D.pseudoobscura:54

G3JHB0              	100.00%		B5DY45              	100.00%
Bootstrap support for G3JHB0 as seed ortholog is 99%.
Bootstrap support for B5DY45 as seed ortholog is 96%.

Group of orthologs #1224. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 D.pseudoobscura:19

G3J9W0              	100.00%		Q29MT2              	100.00%
Bootstrap support for G3J9W0 as seed ortholog is 100%.
Bootstrap support for Q29MT2 as seed ortholog is 88%.

Group of orthologs #1225. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 D.pseudoobscura:163

G3JQH1              	100.00%		Q298C1              	100.00%
Bootstrap support for G3JQH1 as seed ortholog is 100%.
Bootstrap support for Q298C1 as seed ortholog is 100%.

Group of orthologs #1226. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 D.pseudoobscura:163

G3JQT9              	100.00%		Q29C12              	100.00%
Bootstrap support for G3JQT9 as seed ortholog is 100%.
Bootstrap support for Q29C12 as seed ortholog is 100%.

Group of orthologs #1227. Best score 163 bits
Score difference with first non-orthologous sequence - C.militaris:163 D.pseudoobscura:163

G3JMR0              	100.00%		Q2M0D4              	100.00%
Bootstrap support for G3JMR0 as seed ortholog is 100%.
Bootstrap support for Q2M0D4 as seed ortholog is 100%.

Group of orthologs #1228. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:162

G3JD04              	100.00%		Q29GU0              	100.00%
                    	       		Q298C0              	53.08%
Bootstrap support for G3JD04 as seed ortholog is 100%.
Bootstrap support for Q29GU0 as seed ortholog is 100%.

Group of orthologs #1229. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:14

G3JQV6              	100.00%		Q28ZT2              	100.00%
G3J9Q5              	7.46%		
Bootstrap support for G3JQV6 as seed ortholog is 100%.
Bootstrap support for Q28ZT2 as seed ortholog is 60%.
Alternative seed ortholog is Q29N05 (14 bits away from this cluster)

Group of orthologs #1230. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:162

G3J8B9              	100.00%		B5DSB0              	100.00%
Bootstrap support for G3J8B9 as seed ortholog is 100%.
Bootstrap support for B5DSB0 as seed ortholog is 100%.

Group of orthologs #1231. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:31

G3J4Q4              	100.00%		Q29LS1              	100.00%
Bootstrap support for G3J4Q4 as seed ortholog is 100%.
Bootstrap support for Q29LS1 as seed ortholog is 82%.

Group of orthologs #1232. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:88

G3JUB2              	100.00%		P84323              	100.00%
Bootstrap support for G3JUB2 as seed ortholog is 100%.
Bootstrap support for P84323 as seed ortholog is 100%.

Group of orthologs #1233. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:92

G3JSD8              	100.00%		Q29GS6              	100.00%
Bootstrap support for G3JSD8 as seed ortholog is 100%.
Bootstrap support for Q29GS6 as seed ortholog is 99%.

Group of orthologs #1234. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:162

G3JT95              	100.00%		Q29IT9              	100.00%
Bootstrap support for G3JT95 as seed ortholog is 100%.
Bootstrap support for Q29IT9 as seed ortholog is 100%.

Group of orthologs #1235. Best score 162 bits
Score difference with first non-orthologous sequence - C.militaris:162 D.pseudoobscura:162

G3JRU3              	100.00%		Q29LS8              	100.00%
Bootstrap support for G3JRU3 as seed ortholog is 100%.
Bootstrap support for Q29LS8 as seed ortholog is 100%.

Group of orthologs #1236. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 D.pseudoobscura:161

G3J6Q9              	100.00%		Q293T1              	100.00%
Bootstrap support for G3J6Q9 as seed ortholog is 100%.
Bootstrap support for Q293T1 as seed ortholog is 100%.

Group of orthologs #1237. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 D.pseudoobscura:161

G3J7F4              	100.00%		Q298J1              	100.00%
Bootstrap support for G3J7F4 as seed ortholog is 100%.
Bootstrap support for Q298J1 as seed ortholog is 100%.

Group of orthologs #1238. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:161

G3J7P3              	100.00%		Q29BL4              	100.00%
Bootstrap support for G3J7P3 as seed ortholog is 92%.
Bootstrap support for Q29BL4 as seed ortholog is 100%.

Group of orthologs #1239. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 D.pseudoobscura:161

G3JHB7              	100.00%		Q295M4              	100.00%
Bootstrap support for G3JHB7 as seed ortholog is 100%.
Bootstrap support for Q295M4 as seed ortholog is 100%.

Group of orthologs #1240. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 D.pseudoobscura:161

G3J8B4              	100.00%		Q29MI4              	100.00%
Bootstrap support for G3J8B4 as seed ortholog is 100%.
Bootstrap support for Q29MI4 as seed ortholog is 100%.

Group of orthologs #1241. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:89

G3JM52              	100.00%		Q29CH0              	100.00%
Bootstrap support for G3JM52 as seed ortholog is 97%.
Bootstrap support for Q29CH0 as seed ortholog is 98%.

Group of orthologs #1242. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:161 D.pseudoobscura:87

G3JQB3              	100.00%		Q29L16              	100.00%
Bootstrap support for G3JQB3 as seed ortholog is 100%.
Bootstrap support for Q29L16 as seed ortholog is 99%.

Group of orthologs #1243. Best score 161 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:109

G3JP73              	100.00%		Q29MQ5              	100.00%
Bootstrap support for G3JP73 as seed ortholog is 99%.
Bootstrap support for Q29MQ5 as seed ortholog is 99%.

Group of orthologs #1244. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:160

G3JCU4              	100.00%		B5DQB3              	100.00%
                    	       		Q29D89              	10.78%
                    	       		Q29D90              	7.27%
Bootstrap support for G3JCU4 as seed ortholog is 100%.
Bootstrap support for B5DQB3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:160

G3J2J3              	100.00%		Q29BM6              	100.00%
                    	       		Q29BM5              	50.34%
Bootstrap support for G3J2J3 as seed ortholog is 98%.
Bootstrap support for Q29BM6 as seed ortholog is 100%.

Group of orthologs #1246. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:160

G3J3L5              	100.00%		B5DWE4              	100.00%
Bootstrap support for G3J3L5 as seed ortholog is 100%.
Bootstrap support for B5DWE4 as seed ortholog is 100%.

Group of orthologs #1247. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:160

G3J697              	100.00%		B5E0J8              	100.00%
Bootstrap support for G3J697 as seed ortholog is 100%.
Bootstrap support for B5E0J8 as seed ortholog is 100%.

Group of orthologs #1248. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:40

G3JAF3              	100.00%		Q28X82              	100.00%
Bootstrap support for G3JAF3 as seed ortholog is 100%.
Bootstrap support for Q28X82 as seed ortholog is 93%.

Group of orthologs #1249. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:160

G3JHE2              	100.00%		Q29DS0              	100.00%
Bootstrap support for G3JHE2 as seed ortholog is 100%.
Bootstrap support for Q29DS0 as seed ortholog is 100%.

Group of orthologs #1250. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:160

G3JLS4              	100.00%		Q29DQ0              	100.00%
Bootstrap support for G3JLS4 as seed ortholog is 94%.
Bootstrap support for Q29DQ0 as seed ortholog is 100%.

Group of orthologs #1251. Best score 160 bits
Score difference with first non-orthologous sequence - C.militaris:160 D.pseudoobscura:160

G3JMR1              	100.00%		Q8I1B4              	100.00%
Bootstrap support for G3JMR1 as seed ortholog is 100%.
Bootstrap support for Q8I1B4 as seed ortholog is 100%.

Group of orthologs #1252. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 D.pseudoobscura:159

G3JND5              	100.00%		B5DHX9              	100.00%
                    	       		Q291S9              	50.07%
                    	       		B5DVN8              	34.61%
Bootstrap support for G3JND5 as seed ortholog is 100%.
Bootstrap support for B5DHX9 as seed ortholog is 100%.

Group of orthologs #1253. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 D.pseudoobscura:159

G3J5S7              	100.00%		Q29H30              	100.00%
                    	       		Q29E36              	28.04%
Bootstrap support for G3J5S7 as seed ortholog is 100%.
Bootstrap support for Q29H30 as seed ortholog is 100%.

Group of orthologs #1254. Best score 159 bits
Score difference with first non-orthologous sequence - C.militaris:159 D.pseudoobscura:80

G3JCY1              	100.00%		Q291L7              	100.00%
Bootstrap support for G3JCY1 as seed ortholog is 100%.
Bootstrap support for Q291L7 as seed ortholog is 98%.

Group of orthologs #1255. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:108

G3JLT2              	100.00%		B5E188              	100.00%
                    	       		B5DIE8              	11.27%
                    	       		B5DL17              	8.67%
Bootstrap support for G3JLT2 as seed ortholog is 100%.
Bootstrap support for B5E188 as seed ortholog is 99%.

Group of orthologs #1256. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3J5R8              	100.00%		Q29AN0              	100.00%
Bootstrap support for G3J5R8 as seed ortholog is 100%.
Bootstrap support for Q29AN0 as seed ortholog is 100%.

Group of orthologs #1257. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3JC38              	100.00%		Q295Q1              	100.00%
Bootstrap support for G3JC38 as seed ortholog is 100%.
Bootstrap support for Q295Q1 as seed ortholog is 100%.

Group of orthologs #1258. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3JP75              	100.00%		B5DZ21              	100.00%
Bootstrap support for G3JP75 as seed ortholog is 100%.
Bootstrap support for B5DZ21 as seed ortholog is 100%.

Group of orthologs #1259. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3JDQ3              	100.00%		Q298L1              	100.00%
Bootstrap support for G3JDQ3 as seed ortholog is 100%.
Bootstrap support for Q298L1 as seed ortholog is 100%.

Group of orthologs #1260. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3J3M8              	100.00%		Q2LZH4              	100.00%
Bootstrap support for G3J3M8 as seed ortholog is 100%.
Bootstrap support for Q2LZH4 as seed ortholog is 100%.

Group of orthologs #1261. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3JF65              	100.00%		Q29GK0              	100.00%
Bootstrap support for G3JF65 as seed ortholog is 100%.
Bootstrap support for Q29GK0 as seed ortholog is 100%.

Group of orthologs #1262. Best score 158 bits
Score difference with first non-orthologous sequence - C.militaris:158 D.pseudoobscura:158

G3JSN5              	100.00%		Q29LH2              	100.00%
Bootstrap support for G3JSN5 as seed ortholog is 100%.
Bootstrap support for Q29LH2 as seed ortholog is 100%.

Group of orthologs #1263. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:157

G3JHV9              	100.00%		B5DVW6              	100.00%
                    	       		B5DJL9              	42.00%
                    	       		B5DY55              	19.50%
                    	       		B5DN15              	12.50%
                    	       		Q296B1              	10.00%
Bootstrap support for G3JHV9 as seed ortholog is 100%.
Bootstrap support for B5DVW6 as seed ortholog is 100%.

Group of orthologs #1264. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:157

G3J2Q5              	100.00%		B5DMD0              	100.00%
                    	       		Q291Y9              	26.57%
Bootstrap support for G3J2Q5 as seed ortholog is 100%.
Bootstrap support for B5DMD0 as seed ortholog is 100%.

Group of orthologs #1265. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:87

G3J356              	100.00%		Q28ZX3              	100.00%
Bootstrap support for G3J356 as seed ortholog is 100%.
Bootstrap support for Q28ZX3 as seed ortholog is 99%.

Group of orthologs #1266. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:103

G3JLY2              	100.00%		B5DW72              	100.00%
Bootstrap support for G3JLY2 as seed ortholog is 100%.
Bootstrap support for B5DW72 as seed ortholog is 99%.

Group of orthologs #1267. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:157 D.pseudoobscura:157

G3JAU3              	100.00%		Q29CG9              	100.00%
Bootstrap support for G3JAU3 as seed ortholog is 100%.
Bootstrap support for Q29CG9 as seed ortholog is 100%.

Group of orthologs #1268. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:19 D.pseudoobscura:157

G3JHP4              	100.00%		Q29D05              	100.00%
Bootstrap support for G3JHP4 as seed ortholog is 65%.
Alternative seed ortholog is G3JN47 (19 bits away from this cluster)
Bootstrap support for Q29D05 as seed ortholog is 100%.

Group of orthologs #1269. Best score 157 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:157

G3JQ38              	100.00%		Q29I14              	100.00%
Bootstrap support for G3JQ38 as seed ortholog is 97%.
Bootstrap support for Q29I14 as seed ortholog is 100%.

Group of orthologs #1270. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 D.pseudoobscura:156

G3J458              	100.00%		Q29NM8              	100.00%
Bootstrap support for G3J458 as seed ortholog is 100%.
Bootstrap support for Q29NM8 as seed ortholog is 100%.

Group of orthologs #1271. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 D.pseudoobscura:156

G3JU63              	100.00%		Q28YH8              	100.00%
Bootstrap support for G3JU63 as seed ortholog is 100%.
Bootstrap support for Q28YH8 as seed ortholog is 100%.

Group of orthologs #1272. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 D.pseudoobscura:104

G3JDE3              	100.00%		Q2LZL7              	100.00%
Bootstrap support for G3JDE3 as seed ortholog is 100%.
Bootstrap support for Q2LZL7 as seed ortholog is 100%.

Group of orthologs #1273. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:26 D.pseudoobscura:74

G3JG50              	100.00%		Q2LYK4              	100.00%
Bootstrap support for G3JG50 as seed ortholog is 73%.
Alternative seed ortholog is G3J449 (26 bits away from this cluster)
Bootstrap support for Q2LYK4 as seed ortholog is 96%.

Group of orthologs #1274. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 D.pseudoobscura:156

G3JQR1              	100.00%		Q29FA0              	100.00%
Bootstrap support for G3JQR1 as seed ortholog is 100%.
Bootstrap support for Q29FA0 as seed ortholog is 100%.

Group of orthologs #1275. Best score 156 bits
Score difference with first non-orthologous sequence - C.militaris:156 D.pseudoobscura:156

G3JTV9              	100.00%		Q29DF6              	100.00%
Bootstrap support for G3JTV9 as seed ortholog is 100%.
Bootstrap support for Q29DF6 as seed ortholog is 100%.

Group of orthologs #1276. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 D.pseudoobscura:97

G3JPM9              	100.00%		Q28ZE2              	100.00%
                    	       		B5E0D3              	10.08%
Bootstrap support for G3JPM9 as seed ortholog is 100%.
Bootstrap support for Q28ZE2 as seed ortholog is 98%.

Group of orthologs #1277. Best score 155 bits
Score difference with first non-orthologous sequence - C.militaris:155 D.pseudoobscura:155

G3JQ41              	100.00%		Q29IC7              	100.00%
Bootstrap support for G3JQ41 as seed ortholog is 100%.
Bootstrap support for Q29IC7 as seed ortholog is 100%.

Group of orthologs #1278. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 D.pseudoobscura:66

G3JIF6              	100.00%		Q28XU7              	100.00%
                    	       		Q28XU6              	58.36%
                    	       		B5DYM2              	39.21%
                    	       		Q28YB9              	20.67%
                    	       		B5E056              	20.36%
Bootstrap support for G3JIF6 as seed ortholog is 100%.
Bootstrap support for Q28XU7 as seed ortholog is 99%.

Group of orthologs #1279. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 D.pseudoobscura:154

G3J358              	100.00%		I5APQ3              	100.00%
Bootstrap support for G3J358 as seed ortholog is 100%.
Bootstrap support for I5APQ3 as seed ortholog is 100%.

Group of orthologs #1280. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:154 D.pseudoobscura:154

G3J8Q3              	100.00%		Q29GM7              	100.00%
Bootstrap support for G3J8Q3 as seed ortholog is 100%.
Bootstrap support for Q29GM7 as seed ortholog is 100%.

Group of orthologs #1281. Best score 154 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:154

G3JPR7              	100.00%		Q29JF1              	100.00%
Bootstrap support for G3JPR7 as seed ortholog is 98%.
Bootstrap support for Q29JF1 as seed ortholog is 100%.

Group of orthologs #1282. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:153

G3JQ70              	100.00%		Q28XC0              	100.00%
G3JBL7              	100.00%		Q2LZU9              	100.00%
G3JIN2              	100.00%		Q292Z0              	100.00%
G3J9N7              	31.78%		Q28X65              	15.50%
G3J4C4              	30.57%		
G3JBU2              	27.50%		
G3J435              	11.48%		
G3JTX3              	11.48%		
G3J3J0              	10.81%		
G3J4W7              	10.55%		
G3JFN9              	9.75%		
G3JKR6              	8.28%		
G3JT59              	8.01%		
G3JUY2              	7.88%		
G3JT69              	7.88%		
Bootstrap support for G3JQ70 as seed ortholog is 53%.
Alternative seed ortholog is G3JLP8 (44 bits away from this cluster)
Bootstrap support for G3JBL7 as seed ortholog is 76%.
Bootstrap support for G3JIN2 as seed ortholog is 81%.
Bootstrap support for Q28XC0 as seed ortholog is 100%.
Bootstrap support for Q2LZU9 as seed ortholog is 100%.
Bootstrap support for Q292Z0 as seed ortholog is 100%.

Group of orthologs #1283. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:153

G3J511              	100.00%		Q292E2              	100.00%
G3JQS2              	15.17%		Q296H4              	21.06%
G3JBY6              	12.33%		
G3J4E4              	6.22%		
Bootstrap support for G3J511 as seed ortholog is 91%.
Bootstrap support for Q292E2 as seed ortholog is 100%.

Group of orthologs #1284. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 D.pseudoobscura:153

G3J7V8              	100.00%		Q299D5              	100.00%
Bootstrap support for G3J7V8 as seed ortholog is 100%.
Bootstrap support for Q299D5 as seed ortholog is 100%.

Group of orthologs #1285. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 D.pseudoobscura:153

G3JUC0              	100.00%		Q295P6              	100.00%
Bootstrap support for G3JUC0 as seed ortholog is 100%.
Bootstrap support for Q295P6 as seed ortholog is 100%.

Group of orthologs #1286. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 D.pseudoobscura:153

G3JGE2              	100.00%		Q2M0C1              	100.00%
Bootstrap support for G3JGE2 as seed ortholog is 100%.
Bootstrap support for Q2M0C1 as seed ortholog is 100%.

Group of orthologs #1287. Best score 153 bits
Score difference with first non-orthologous sequence - C.militaris:153 D.pseudoobscura:153

G3JHC5              	100.00%		Q2LZP4              	100.00%
Bootstrap support for G3JHC5 as seed ortholog is 100%.
Bootstrap support for Q2LZP4 as seed ortholog is 100%.

Group of orthologs #1288. Best score 152 bits
Score difference with first non-orthologous sequence - C.militaris:152 D.pseudoobscura:152

G3J3D8              	100.00%		Q292E9              	100.00%
Bootstrap support for G3J3D8 as seed ortholog is 100%.
Bootstrap support for Q292E9 as seed ortholog is 100%.

Group of orthologs #1289. Best score 152 bits
Score difference with first non-orthologous sequence - C.militaris:152 D.pseudoobscura:152

G3JA01              	100.00%		Q29DK7              	100.00%
Bootstrap support for G3JA01 as seed ortholog is 100%.
Bootstrap support for Q29DK7 as seed ortholog is 100%.

Group of orthologs #1290. Best score 152 bits
Score difference with first non-orthologous sequence - C.militaris:152 D.pseudoobscura:152

G3JTW8              	100.00%		B5DWD6              	100.00%
Bootstrap support for G3JTW8 as seed ortholog is 100%.
Bootstrap support for B5DWD6 as seed ortholog is 100%.

Group of orthologs #1291. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:20 D.pseudoobscura:17

G3J3I1              	100.00%		Q297W3              	100.00%
G3JH12              	33.33%		B5DQ85              	22.83%
G3JBK6              	24.08%		I5AP16              	18.07%
G3JKU9              	16.12%		Q28Z33              	16.85%
G3JQX8              	15.92%		B5DIJ9              	8.18%
G3JFJ8              	14.33%		Q29M60              	5.86%
Bootstrap support for G3J3I1 as seed ortholog is 78%.
Bootstrap support for Q297W3 as seed ortholog is 68%.
Alternative seed ortholog is Q28ZW4 (17 bits away from this cluster)

Group of orthologs #1292. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:10

G3J834              	100.00%		Q294S7              	100.00%
G3JHE4              	44.86%		
G3JMA3              	37.20%		
G3JMY5              	9.33%		
G3JLU1              	6.22%		
Bootstrap support for G3J834 as seed ortholog is 100%.
Bootstrap support for Q294S7 as seed ortholog is 57%.
Alternative seed ortholog is Q29KD6 (10 bits away from this cluster)

Group of orthologs #1293. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:151

G3JGX9              	100.00%		Q29GT2              	100.00%
G3J8H0              	21.63%		
Bootstrap support for G3JGX9 as seed ortholog is 100%.
Bootstrap support for Q29GT2 as seed ortholog is 100%.

Group of orthologs #1294. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:85

G3J3G1              	100.00%		Q298H1              	100.00%
Bootstrap support for G3J3G1 as seed ortholog is 100%.
Bootstrap support for Q298H1 as seed ortholog is 99%.

Group of orthologs #1295. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:51

G3JH65              	100.00%		Q293A7              	100.00%
Bootstrap support for G3JH65 as seed ortholog is 91%.
Bootstrap support for Q293A7 as seed ortholog is 97%.

Group of orthologs #1296. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:151

G3JHC7              	100.00%		Q296B0              	100.00%
Bootstrap support for G3JHC7 as seed ortholog is 100%.
Bootstrap support for Q296B0 as seed ortholog is 100%.

Group of orthologs #1297. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:94 D.pseudoobscura:151

G3JK79              	100.00%		Q29G03              	100.00%
Bootstrap support for G3JK79 as seed ortholog is 99%.
Bootstrap support for Q29G03 as seed ortholog is 100%.

Group of orthologs #1298. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:151

G3JJ93              	100.00%		Q29HV1              	100.00%
Bootstrap support for G3JJ93 as seed ortholog is 100%.
Bootstrap support for Q29HV1 as seed ortholog is 100%.

Group of orthologs #1299. Best score 151 bits
Score difference with first non-orthologous sequence - C.militaris:151 D.pseudoobscura:151

G3JUP1              	100.00%		Q29AQ9              	100.00%
Bootstrap support for G3JUP1 as seed ortholog is 100%.
Bootstrap support for Q29AQ9 as seed ortholog is 100%.

Group of orthologs #1300. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:150

G3JBJ1              	100.00%		Q28WX2              	100.00%
G3J752              	27.45%		
Bootstrap support for G3JBJ1 as seed ortholog is 95%.
Bootstrap support for Q28WX2 as seed ortholog is 100%.

Group of orthologs #1301. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 D.pseudoobscura:150

G3JDE8              	100.00%		Q290Z2              	100.00%
Bootstrap support for G3JDE8 as seed ortholog is 100%.
Bootstrap support for Q290Z2 as seed ortholog is 100%.

Group of orthologs #1302. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 D.pseudoobscura:150

G3JSG0              	100.00%		Q28Y85              	100.00%
Bootstrap support for G3JSG0 as seed ortholog is 100%.
Bootstrap support for Q28Y85 as seed ortholog is 100%.

Group of orthologs #1303. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 D.pseudoobscura:150

G3JS89              	100.00%		Q28ZT4              	100.00%
Bootstrap support for G3JS89 as seed ortholog is 100%.
Bootstrap support for Q28ZT4 as seed ortholog is 100%.

Group of orthologs #1304. Best score 150 bits
Score difference with first non-orthologous sequence - C.militaris:150 D.pseudoobscura:150

G3JED9              	100.00%		Q29L30              	100.00%
Bootstrap support for G3JED9 as seed ortholog is 100%.
Bootstrap support for Q29L30 as seed ortholog is 100%.

Group of orthologs #1305. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3JT05              	100.00%		B5DXG9              	100.00%
                    	       		B5DM19              	47.91%
Bootstrap support for G3JT05 as seed ortholog is 100%.
Bootstrap support for B5DXG9 as seed ortholog is 100%.

Group of orthologs #1306. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3JJ52              	100.00%		B5DK31              	100.00%
Bootstrap support for G3JJ52 as seed ortholog is 100%.
Bootstrap support for B5DK31 as seed ortholog is 100%.

Group of orthologs #1307. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3J396              	100.00%		Q29GX7              	100.00%
Bootstrap support for G3J396 as seed ortholog is 100%.
Bootstrap support for Q29GX7 as seed ortholog is 100%.

Group of orthologs #1308. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3J2S7              	100.00%		Q29NK6              	100.00%
Bootstrap support for G3J2S7 as seed ortholog is 100%.
Bootstrap support for Q29NK6 as seed ortholog is 100%.

Group of orthologs #1309. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3JB27              	100.00%		Q29FA5              	100.00%
Bootstrap support for G3JB27 as seed ortholog is 100%.
Bootstrap support for Q29FA5 as seed ortholog is 100%.

Group of orthologs #1310. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:149

G3JEI3              	100.00%		Q29FM3              	100.00%
Bootstrap support for G3JEI3 as seed ortholog is 96%.
Bootstrap support for Q29FM3 as seed ortholog is 100%.

Group of orthologs #1311. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3JI27              	100.00%		Q29K64              	100.00%
Bootstrap support for G3JI27 as seed ortholog is 100%.
Bootstrap support for Q29K64 as seed ortholog is 100%.

Group of orthologs #1312. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3JHK6              	100.00%		Q29KX2              	100.00%
Bootstrap support for G3JHK6 as seed ortholog is 100%.
Bootstrap support for Q29KX2 as seed ortholog is 100%.

Group of orthologs #1313. Best score 149 bits
Score difference with first non-orthologous sequence - C.militaris:149 D.pseudoobscura:149

G3JIS6              	100.00%		Q29L64              	100.00%
Bootstrap support for G3JIS6 as seed ortholog is 100%.
Bootstrap support for Q29L64 as seed ortholog is 100%.

Group of orthologs #1314. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:9 D.pseudoobscura:96

G3JPW8              	100.00%		B5E1G5              	100.00%
G3J4A9              	100.00%		Q28X25              	100.00%
                    	       		Q28X24              	42.57%
                    	       		Q29E12              	17.41%
                    	       		Q299Y8              	17.22%
                    	       		B5E1G6              	13.92%
                    	       		B5E1G8              	12.15%
                    	       		B5E1G7              	11.67%
Bootstrap support for G3JPW8 as seed ortholog is 60%.
Alternative seed ortholog is G3JTI8 (9 bits away from this cluster)
Bootstrap support for G3J4A9 as seed ortholog is 55%.
Alternative seed ortholog is G3JTI8 (9 bits away from this cluster)
Bootstrap support for B5E1G5 as seed ortholog is 97%.
Bootstrap support for Q28X25 as seed ortholog is 95%.

Group of orthologs #1315. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:35 D.pseudoobscura:73

G3J2Y6              	100.00%		Q29G93              	100.00%
                    	       		Q28WT2              	9.95%
                    	       		B5E041              	9.38%
                    	       		B5DZ85              	9.10%
                    	       		P25726              	6.07%
                    	       		P25727              	5.78%
Bootstrap support for G3J2Y6 as seed ortholog is 74%.
Alternative seed ortholog is G3J8E9 (35 bits away from this cluster)
Bootstrap support for Q29G93 as seed ortholog is 92%.

Group of orthologs #1316. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:91

G3JC67              	100.00%		Q29G97              	100.00%
G3JFW9              	100.00%		
G3JNT7              	19.62%		
G3J7W1              	17.94%		
G3JSL7              	13.88%		
G3JR15              	8.73%		
Bootstrap support for G3JC67 as seed ortholog is 97%.
Bootstrap support for G3JFW9 as seed ortholog is 98%.
Bootstrap support for Q29G97 as seed ortholog is 97%.

Group of orthologs #1317. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:53

G3JKH0              	100.00%		Q29II8              	100.00%
                    	       		Q290Q4              	26.78%
                    	       		Q28YK4              	24.92%
                    	       		Q28YK5              	21.36%
                    	       		Q28ZA3              	6.04%
Bootstrap support for G3JKH0 as seed ortholog is 88%.
Bootstrap support for Q29II8 as seed ortholog is 90%.

Group of orthologs #1318. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:13 D.pseudoobscura:148

G3JFR4              	100.00%		Q29JL5              	100.00%
G3JLK6              	45.64%		Q29K17              	8.44%
G3JCF7              	7.73%		
Bootstrap support for G3JFR4 as seed ortholog is 62%.
Alternative seed ortholog is G3JLP8 (13 bits away from this cluster)
Bootstrap support for Q29JL5 as seed ortholog is 100%.

Group of orthologs #1319. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:148

G3JMA1              	100.00%		B5DJJ2              	100.00%
Bootstrap support for G3JMA1 as seed ortholog is 100%.
Bootstrap support for B5DJJ2 as seed ortholog is 100%.

Group of orthologs #1320. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:61

G3J2N5              	100.00%		Q290C3              	100.00%
Bootstrap support for G3J2N5 as seed ortholog is 100%.
Bootstrap support for Q290C3 as seed ortholog is 99%.

Group of orthologs #1321. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:148

G3JCU7              	100.00%		I5AN32              	100.00%
Bootstrap support for G3JCU7 as seed ortholog is 100%.
Bootstrap support for I5AN32 as seed ortholog is 100%.

Group of orthologs #1322. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:148

G3J8S3              	100.00%		Q299C5              	100.00%
Bootstrap support for G3J8S3 as seed ortholog is 100%.
Bootstrap support for Q299C5 as seed ortholog is 100%.

Group of orthologs #1323. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:148

G3J8Q0              	100.00%		Q299N5              	100.00%
Bootstrap support for G3J8Q0 as seed ortholog is 99%.
Bootstrap support for Q299N5 as seed ortholog is 100%.

Group of orthologs #1324. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:148

G3J3B7              	100.00%		Q29NB2              	100.00%
Bootstrap support for G3J3B7 as seed ortholog is 100%.
Bootstrap support for Q29NB2 as seed ortholog is 100%.

Group of orthologs #1325. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:148

G3JKF2              	100.00%		Q294Q9              	100.00%
Bootstrap support for G3JKF2 as seed ortholog is 96%.
Bootstrap support for Q294Q9 as seed ortholog is 100%.

Group of orthologs #1326. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:103

G3J9Y7              	100.00%		Q29LH3              	100.00%
Bootstrap support for G3J9Y7 as seed ortholog is 100%.
Bootstrap support for Q29LH3 as seed ortholog is 99%.

Group of orthologs #1327. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:8 D.pseudoobscura:41

G3JUN1              	100.00%		Q299S3              	100.00%
Bootstrap support for G3JUN1 as seed ortholog is 56%.
Alternative seed ortholog is G3J8E9 (8 bits away from this cluster)
Bootstrap support for Q299S3 as seed ortholog is 79%.

Group of orthologs #1328. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:148

G3JN28              	100.00%		Q29P85              	100.00%
Bootstrap support for G3JN28 as seed ortholog is 99%.
Bootstrap support for Q29P85 as seed ortholog is 100%.

Group of orthologs #1329. Best score 148 bits
Score difference with first non-orthologous sequence - C.militaris:148 D.pseudoobscura:104

G3JMH0              	100.00%		Q2LZ71              	100.00%
Bootstrap support for G3JMH0 as seed ortholog is 100%.
Bootstrap support for Q2LZ71 as seed ortholog is 99%.

Group of orthologs #1330. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:6 D.pseudoobscura:147

G3JRU2              	100.00%		Q297T6              	100.00%
                    	       		B5DWJ2              	14.13%
Bootstrap support for G3JRU2 as seed ortholog is 49%.
Alternative seed ortholog is G3JF27 (6 bits away from this cluster)
Bootstrap support for Q297T6 as seed ortholog is 100%.

Group of orthologs #1331. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 D.pseudoobscura:147

G3JUX3              	100.00%		Q29EQ1              	100.00%
                    	       		I5AMV1              	68.49%
Bootstrap support for G3JUX3 as seed ortholog is 100%.
Bootstrap support for Q29EQ1 as seed ortholog is 100%.

Group of orthologs #1332. Best score 147 bits
Score difference with first non-orthologous sequence - C.militaris:147 D.pseudoobscura:147

G3JHJ2              	100.00%		Q2M1D3              	100.00%
Bootstrap support for G3JHJ2 as seed ortholog is 100%.
Bootstrap support for Q2M1D3 as seed ortholog is 100%.

Group of orthologs #1333. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JPY1              	100.00%		B5DLB9              	100.00%
                    	       		Q294X0              	48.57%
Bootstrap support for G3JPY1 as seed ortholog is 100%.
Bootstrap support for B5DLB9 as seed ortholog is 100%.

Group of orthologs #1334. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JCQ4              	100.00%		B5DRB3              	100.00%
Bootstrap support for G3JCQ4 as seed ortholog is 100%.
Bootstrap support for B5DRB3 as seed ortholog is 100%.

Group of orthologs #1335. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3J6J0              	100.00%		Q28ZD5              	100.00%
Bootstrap support for G3J6J0 as seed ortholog is 100%.
Bootstrap support for Q28ZD5 as seed ortholog is 100%.

Group of orthologs #1336. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JFA2              	100.00%		Q29FV6              	100.00%
Bootstrap support for G3JFA2 as seed ortholog is 100%.
Bootstrap support for Q29FV6 as seed ortholog is 100%.

Group of orthologs #1337. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JKS2              	100.00%		Q29AF7              	100.00%
Bootstrap support for G3JKS2 as seed ortholog is 100%.
Bootstrap support for Q29AF7 as seed ortholog is 100%.

Group of orthologs #1338. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:18

G3JCF5              	100.00%		Q2LYI7              	100.00%
Bootstrap support for G3JCF5 as seed ortholog is 100%.
Bootstrap support for Q2LYI7 as seed ortholog is 72%.
Alternative seed ortholog is Q29JJ0 (18 bits away from this cluster)

Group of orthologs #1339. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JQU4              	100.00%		Q29B23              	100.00%
Bootstrap support for G3JQU4 as seed ortholog is 100%.
Bootstrap support for Q29B23 as seed ortholog is 100%.

Group of orthologs #1340. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JDY4              	100.00%		Q2LZ84              	100.00%
Bootstrap support for G3JDY4 as seed ortholog is 100%.
Bootstrap support for Q2LZ84 as seed ortholog is 100%.

Group of orthologs #1341. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JDT2              	100.00%		Q2M0N0              	100.00%
Bootstrap support for G3JDT2 as seed ortholog is 100%.
Bootstrap support for Q2M0N0 as seed ortholog is 100%.

Group of orthologs #1342. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JPW3              	100.00%		Q29GG6              	100.00%
Bootstrap support for G3JPW3 as seed ortholog is 100%.
Bootstrap support for Q29GG6 as seed ortholog is 100%.

Group of orthologs #1343. Best score 146 bits
Score difference with first non-orthologous sequence - C.militaris:146 D.pseudoobscura:146

G3JMG9              	100.00%		Q29KQ6              	100.00%
Bootstrap support for G3JMG9 as seed ortholog is 100%.
Bootstrap support for Q29KQ6 as seed ortholog is 100%.

Group of orthologs #1344. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:145

G3JAN0              	100.00%		Q29MJ0              	100.00%
G3J5L9              	14.41%		
Bootstrap support for G3JAN0 as seed ortholog is 100%.
Bootstrap support for Q29MJ0 as seed ortholog is 100%.

Group of orthologs #1345. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:145

G3JEM1              	100.00%		B5DXR7              	100.00%
Bootstrap support for G3JEM1 as seed ortholog is 100%.
Bootstrap support for B5DXR7 as seed ortholog is 100%.

Group of orthologs #1346. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:145

G3J9T3              	100.00%		Q28XU9              	100.00%
Bootstrap support for G3J9T3 as seed ortholog is 100%.
Bootstrap support for Q28XU9 as seed ortholog is 100%.

Group of orthologs #1347. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:145

G3JKE2              	100.00%		Q291T0              	100.00%
Bootstrap support for G3JKE2 as seed ortholog is 100%.
Bootstrap support for Q291T0 as seed ortholog is 100%.

Group of orthologs #1348. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:145

G3JIN6              	100.00%		Q29AH9              	100.00%
Bootstrap support for G3JIN6 as seed ortholog is 100%.
Bootstrap support for Q29AH9 as seed ortholog is 100%.

Group of orthologs #1349. Best score 145 bits
Score difference with first non-orthologous sequence - C.militaris:145 D.pseudoobscura:145

G3JMA5              	100.00%		Q29F38              	100.00%
Bootstrap support for G3JMA5 as seed ortholog is 100%.
Bootstrap support for Q29F38 as seed ortholog is 100%.

Group of orthologs #1350. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:36

G3J542              	100.00%		B5DKF1              	100.00%
G3JIL1              	29.51%		B5DKF0              	31.82%
G3JFM2              	24.67%		Q29JM1              	29.37%
                    	       		Q2M128              	28.67%
                    	       		Q2LYR6              	26.11%
Bootstrap support for G3J542 as seed ortholog is 89%.
Bootstrap support for B5DKF1 as seed ortholog is 79%.

Group of orthologs #1351. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3JD92              	100.00%		Q28YH0              	100.00%
Bootstrap support for G3JD92 as seed ortholog is 100%.
Bootstrap support for Q28YH0 as seed ortholog is 100%.

Group of orthologs #1352. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3JEC7              	100.00%		Q28ZY1              	100.00%
Bootstrap support for G3JEC7 as seed ortholog is 100%.
Bootstrap support for Q28ZY1 as seed ortholog is 100%.

Group of orthologs #1353. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3J9I6              	100.00%		Q297L0              	100.00%
Bootstrap support for G3J9I6 as seed ortholog is 100%.
Bootstrap support for Q297L0 as seed ortholog is 100%.

Group of orthologs #1354. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3J2R0              	100.00%		Q2LYN4              	100.00%
Bootstrap support for G3J2R0 as seed ortholog is 100%.
Bootstrap support for Q2LYN4 as seed ortholog is 100%.

Group of orthologs #1355. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3JAT6              	100.00%		Q29MJ3              	100.00%
Bootstrap support for G3JAT6 as seed ortholog is 100%.
Bootstrap support for Q29MJ3 as seed ortholog is 100%.

Group of orthologs #1356. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:96

G3J8G2              	100.00%		Q2M0K6              	100.00%
Bootstrap support for G3J8G2 as seed ortholog is 100%.
Bootstrap support for Q2M0K6 as seed ortholog is 100%.

Group of orthologs #1357. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3JN27              	100.00%		Q29E19              	100.00%
Bootstrap support for G3JN27 as seed ortholog is 100%.
Bootstrap support for Q29E19 as seed ortholog is 100%.

Group of orthologs #1358. Best score 144 bits
Score difference with first non-orthologous sequence - C.militaris:144 D.pseudoobscura:144

G3JRA8              	100.00%		Q2M047              	100.00%
Bootstrap support for G3JRA8 as seed ortholog is 100%.
Bootstrap support for Q2M047 as seed ortholog is 100%.

Group of orthologs #1359. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:143

G3JIC1              	100.00%		B5DHP7              	100.00%
G3JQK6              	100.00%		B5DZU4              	100.00%
                    	       		B5DPR4              	60.55%
                    	       		Q28WR7              	34.96%
                    	       		Q2LZY8              	29.22%
                    	       		Q2LZY9              	25.46%
                    	       		Q2LYU9              	25.22%
                    	       		Q29EE4              	22.60%
                    	       		Q293E9              	20.78%
                    	       		Q29HX4              	20.55%
                    	       		Q2LZY7              	17.85%
                    	       		Q29HX3              	15.98%
Bootstrap support for G3JIC1 as seed ortholog is 95%.
Bootstrap support for G3JQK6 as seed ortholog is 91%.
Bootstrap support for B5DHP7 as seed ortholog is 100%.
Bootstrap support for B5DZU4 as seed ortholog is 100%.

Group of orthologs #1360. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:9

G3J5P3              	100.00%		Q28Y61              	100.00%
                    	       		B5E092              	24.39%
                    	       		B5E094              	18.95%
                    	       		B5E093              	17.14%
                    	       		Q28YZ0              	5.80%
Bootstrap support for G3J5P3 as seed ortholog is 100%.
Bootstrap support for Q28Y61 as seed ortholog is 57%.
Alternative seed ortholog is Q29NB7 (9 bits away from this cluster)

Group of orthologs #1361. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:71

G3JQA3              	100.00%		Q29D47              	100.00%
                    	       		B5DRH4              	33.08%
                    	       		B5DQZ1              	27.61%
                    	       		Q29FK2              	22.89%
                    	       		B5DJG9              	19.90%
Bootstrap support for G3JQA3 as seed ortholog is 94%.
Bootstrap support for Q29D47 as seed ortholog is 98%.

Group of orthologs #1362. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:143

G3J3D1              	100.00%		Q290Y1              	100.00%
Bootstrap support for G3J3D1 as seed ortholog is 97%.
Bootstrap support for Q290Y1 as seed ortholog is 100%.

Group of orthologs #1363. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JHT3              	100.00%		B5E0X3              	100.00%
Bootstrap support for G3JHT3 as seed ortholog is 100%.
Bootstrap support for B5E0X3 as seed ortholog is 100%.

Group of orthologs #1364. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JLT6              	100.00%		B5E0A0              	100.00%
Bootstrap support for G3JLT6 as seed ortholog is 100%.
Bootstrap support for B5E0A0 as seed ortholog is 100%.

Group of orthologs #1365. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JA43              	100.00%		Q299W6              	100.00%
Bootstrap support for G3JA43 as seed ortholog is 100%.
Bootstrap support for Q299W6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JNL7              	100.00%		Q29H31              	100.00%
Bootstrap support for G3JNL7 as seed ortholog is 100%.
Bootstrap support for Q29H31 as seed ortholog is 100%.

Group of orthologs #1367. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JN11              	100.00%		Q29K22              	100.00%
Bootstrap support for G3JN11 as seed ortholog is 100%.
Bootstrap support for Q29K22 as seed ortholog is 100%.

Group of orthologs #1368. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JRF2              	100.00%		Q29J44              	100.00%
Bootstrap support for G3JRF2 as seed ortholog is 100%.
Bootstrap support for Q29J44 as seed ortholog is 100%.

Group of orthologs #1369. Best score 143 bits
Score difference with first non-orthologous sequence - C.militaris:143 D.pseudoobscura:143

G3JMC6              	100.00%		Q2LZZ4              	100.00%
Bootstrap support for G3JMC6 as seed ortholog is 100%.
Bootstrap support for Q2LZZ4 as seed ortholog is 100%.

Group of orthologs #1370. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 D.pseudoobscura:142

G3JAM6              	100.00%		Q290Z8              	100.00%
                    	       		Q29A22              	36.55%
                    	       		Q29K12              	31.43%
                    	       		Q29KR3              	28.65%
                    	       		Q296X1              	24.85%
                    	       		Q29AY9              	24.12%
                    	       		Q29KR9              	23.25%
                    	       		Q296X2              	21.35%
                    	       		Q29M66              	21.35%
                    	       		Q29AY7              	19.44%
                    	       		Q29KR5              	19.15%
                    	       		Q29DC9              	19.01%
                    	       		B5DU62              	18.57%
                    	       		B5DY09              	16.67%
                    	       		B5DJN7              	16.52%
                    	       		B5DUD8              	15.94%
                    	       		Q29KR8              	15.79%
                    	       		Q28WT8              	14.33%
                    	       		Q29AY8              	13.45%
Bootstrap support for G3JAM6 as seed ortholog is 100%.
Bootstrap support for Q290Z8 as seed ortholog is 100%.

Group of orthologs #1371. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 D.pseudoobscura:142

G3JBT8              	100.00%		B5DVN2              	100.00%
                    	       		Q29DI9              	22.16%
Bootstrap support for G3JBT8 as seed ortholog is 100%.
Bootstrap support for B5DVN2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 D.pseudoobscura:142

G3JLE6              	100.00%		B5DVK9              	100.00%
Bootstrap support for G3JLE6 as seed ortholog is 100%.
Bootstrap support for B5DVK9 as seed ortholog is 100%.

Group of orthologs #1373. Best score 142 bits
Score difference with first non-orthologous sequence - C.militaris:142 D.pseudoobscura:142

G3JJ11              	100.00%		Q29NF8              	100.00%
Bootstrap support for G3JJ11 as seed ortholog is 100%.
Bootstrap support for Q29NF8 as seed ortholog is 100%.

Group of orthologs #1374. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:19 D.pseudoobscura:21

G3JT10              	100.00%		B5DTT4              	100.00%
                    	       		Q28Y24              	32.90%
Bootstrap support for G3JT10 as seed ortholog is 71%.
Alternative seed ortholog is G3J6G9 (19 bits away from this cluster)
Bootstrap support for B5DTT4 as seed ortholog is 72%.
Alternative seed ortholog is Q29LA1 (21 bits away from this cluster)

Group of orthologs #1375. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:141

G3J9Z7              	100.00%		B5DPD7              	100.00%
Bootstrap support for G3J9Z7 as seed ortholog is 100%.
Bootstrap support for B5DPD7 as seed ortholog is 100%.

Group of orthologs #1376. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:141

G3J6J3              	100.00%		B5DW84              	100.00%
Bootstrap support for G3J6J3 as seed ortholog is 100%.
Bootstrap support for B5DW84 as seed ortholog is 100%.

Group of orthologs #1377. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:141

G3J401              	100.00%		Q293H8              	100.00%
Bootstrap support for G3J401 as seed ortholog is 100%.
Bootstrap support for Q293H8 as seed ortholog is 100%.

Group of orthologs #1378. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:141

G3J3P1              	100.00%		Q29M64              	100.00%
Bootstrap support for G3J3P1 as seed ortholog is 100%.
Bootstrap support for Q29M64 as seed ortholog is 100%.

Group of orthologs #1379. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:141

G3JFT3              	100.00%		Q29IV5              	100.00%
Bootstrap support for G3JFT3 as seed ortholog is 100%.
Bootstrap support for Q29IV5 as seed ortholog is 100%.

Group of orthologs #1380. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:141

G3JNP1              	100.00%		Q29FC6              	100.00%
Bootstrap support for G3JNP1 as seed ortholog is 100%.
Bootstrap support for Q29FC6 as seed ortholog is 100%.

Group of orthologs #1381. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:40

G3JQ43              	100.00%		Q29GX3              	100.00%
Bootstrap support for G3JQ43 as seed ortholog is 99%.
Bootstrap support for Q29GX3 as seed ortholog is 87%.

Group of orthologs #1382. Best score 141 bits
Score difference with first non-orthologous sequence - C.militaris:141 D.pseudoobscura:22

G3JQI1              	100.00%		Q2M1D5              	100.00%
Bootstrap support for G3JQI1 as seed ortholog is 100%.
Bootstrap support for Q2M1D5 as seed ortholog is 55%.
Alternative seed ortholog is B5DVQ6 (22 bits away from this cluster)

Group of orthologs #1383. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 D.pseudoobscura:140

G3JUV9              	100.00%		B5DPG7              	100.00%
                    	       		B5DTI9              	7.88%
                    	       		B5DWC1              	7.88%
Bootstrap support for G3JUV9 as seed ortholog is 100%.
Bootstrap support for B5DPG7 as seed ortholog is 100%.

Group of orthologs #1384. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 D.pseudoobscura:140

G3J399              	100.00%		Q29AI1              	100.00%
Bootstrap support for G3J399 as seed ortholog is 100%.
Bootstrap support for Q29AI1 as seed ortholog is 100%.

Group of orthologs #1385. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:29 D.pseudoobscura:21

G3JHU7              	100.00%		Q28Y83              	100.00%
Bootstrap support for G3JHU7 as seed ortholog is 76%.
Bootstrap support for Q28Y83 as seed ortholog is 93%.

Group of orthologs #1386. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 D.pseudoobscura:140

G3JL89              	100.00%		Q29H32              	100.00%
Bootstrap support for G3JL89 as seed ortholog is 100%.
Bootstrap support for Q29H32 as seed ortholog is 100%.

Group of orthologs #1387. Best score 140 bits
Score difference with first non-orthologous sequence - C.militaris:140 D.pseudoobscura:140

G3JQV1              	100.00%		Q29P26              	100.00%
Bootstrap support for G3JQV1 as seed ortholog is 100%.
Bootstrap support for Q29P26 as seed ortholog is 100%.

Group of orthologs #1388. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:52

G3J2Z2              	100.00%		B5DNF9              	100.00%
G3JGN1              	27.63%		B5DY38              	100.00%
Bootstrap support for G3J2Z2 as seed ortholog is 100%.
Bootstrap support for B5DNF9 as seed ortholog is 99%.
Bootstrap support for B5DY38 as seed ortholog is 99%.

Group of orthologs #1389. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:61

G3JFZ0              	100.00%		Q293Z6              	100.00%
                    	       		B5DQG6              	11.86%
Bootstrap support for G3JFZ0 as seed ortholog is 100%.
Bootstrap support for Q293Z6 as seed ortholog is 91%.

Group of orthologs #1390. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3J8C3              	100.00%		Q28XR7              	100.00%
Bootstrap support for G3J8C3 as seed ortholog is 100%.
Bootstrap support for Q28XR7 as seed ortholog is 100%.

Group of orthologs #1391. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:64

G3JEP8              	100.00%		B5DXD8              	100.00%
Bootstrap support for G3JEP8 as seed ortholog is 100%.
Bootstrap support for B5DXD8 as seed ortholog is 82%.

Group of orthologs #1392. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3J853              	100.00%		Q291J3              	100.00%
Bootstrap support for G3J853 as seed ortholog is 100%.
Bootstrap support for Q291J3 as seed ortholog is 100%.

Group of orthologs #1393. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3JAV0              	100.00%		Q290N8              	100.00%
Bootstrap support for G3JAV0 as seed ortholog is 100%.
Bootstrap support for Q290N8 as seed ortholog is 100%.

Group of orthologs #1394. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3J9F9              	100.00%		Q29A39              	100.00%
Bootstrap support for G3J9F9 as seed ortholog is 100%.
Bootstrap support for Q29A39 as seed ortholog is 100%.

Group of orthologs #1395. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3J3L4              	100.00%		Q29I26              	100.00%
Bootstrap support for G3J3L4 as seed ortholog is 100%.
Bootstrap support for Q29I26 as seed ortholog is 100%.

Group of orthologs #1396. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3JA77              	100.00%		Q29BI9              	100.00%
Bootstrap support for G3JA77 as seed ortholog is 100%.
Bootstrap support for Q29BI9 as seed ortholog is 100%.

Group of orthologs #1397. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3J9Z6              	100.00%		Q29FE4              	100.00%
Bootstrap support for G3J9Z6 as seed ortholog is 100%.
Bootstrap support for Q29FE4 as seed ortholog is 100%.

Group of orthologs #1398. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3JJA8              	100.00%		Q29KE4              	100.00%
Bootstrap support for G3JJA8 as seed ortholog is 100%.
Bootstrap support for Q29KE4 as seed ortholog is 100%.

Group of orthologs #1399. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3JI61              	100.00%		Q29LP1              	100.00%
Bootstrap support for G3JI61 as seed ortholog is 100%.
Bootstrap support for Q29LP1 as seed ortholog is 100%.

Group of orthologs #1400. Best score 139 bits
Score difference with first non-orthologous sequence - C.militaris:139 D.pseudoobscura:139

G3JGV3              	100.00%		Q29NY2              	100.00%
Bootstrap support for G3JGV3 as seed ortholog is 100%.
Bootstrap support for Q29NY2 as seed ortholog is 100%.

Group of orthologs #1401. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3J7C2              	100.00%		Q29DZ2              	8.84%
G3JQM6              	100.00%		Q2LYY0              	100.00%
                    	       		Q2LYY1              	8.39%
Bootstrap support for G3J7C2 as seed ortholog is 100%.
Bootstrap support for G3JQM6 as seed ortholog is 100%.
Bootstrap support for Q2LYY0 as seed ortholog is 100%.

Group of orthologs #1402. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3JQP5              	100.00%		B5DKY4              	100.00%
Bootstrap support for G3JQP5 as seed ortholog is 100%.
Bootstrap support for B5DKY4 as seed ortholog is 100%.

Group of orthologs #1403. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:10

G3J9L7              	100.00%		Q295A6              	100.00%
Bootstrap support for G3J9L7 as seed ortholog is 100%.
Bootstrap support for Q295A6 as seed ortholog is 60%.
Alternative seed ortholog is Q295K5 (10 bits away from this cluster)

Group of orthologs #1404. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3JDB6              	100.00%		Q29BR8              	100.00%
Bootstrap support for G3JDB6 as seed ortholog is 100%.
Bootstrap support for Q29BR8 as seed ortholog is 100%.

Group of orthologs #1405. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:138

G3J3R0              	100.00%		Q2LYY5              	100.00%
Bootstrap support for G3J3R0 as seed ortholog is 97%.
Bootstrap support for Q2LYY5 as seed ortholog is 100%.

Group of orthologs #1406. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3J596              	100.00%		Q2M0C0              	100.00%
Bootstrap support for G3J596 as seed ortholog is 100%.
Bootstrap support for Q2M0C0 as seed ortholog is 100%.

Group of orthologs #1407. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3JKT7              	100.00%		Q299Z6              	100.00%
Bootstrap support for G3JKT7 as seed ortholog is 100%.
Bootstrap support for Q299Z6 as seed ortholog is 100%.

Group of orthologs #1408. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3JU53              	100.00%		Q290Q8              	100.00%
Bootstrap support for G3JU53 as seed ortholog is 100%.
Bootstrap support for Q290Q8 as seed ortholog is 100%.

Group of orthologs #1409. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:25

G3J9L6              	100.00%		Q2M043              	100.00%
Bootstrap support for G3J9L6 as seed ortholog is 100%.
Bootstrap support for Q2M043 as seed ortholog is 80%.

Group of orthologs #1410. Best score 138 bits
Score difference with first non-orthologous sequence - C.militaris:138 D.pseudoobscura:138

G3JNV7              	100.00%		Q29FP3              	100.00%
Bootstrap support for G3JNV7 as seed ortholog is 100%.
Bootstrap support for Q29FP3 as seed ortholog is 100%.

Group of orthologs #1411. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:12 D.pseudoobscura:37

G3JRJ7              	100.00%		Q29IW6              	100.00%
                    	       		Q297M6              	34.87%
                    	       		Q297M5              	33.14%
                    	       		B5DWF7              	30.26%
Bootstrap support for G3JRJ7 as seed ortholog is 64%.
Alternative seed ortholog is G3JQZ9 (12 bits away from this cluster)
Bootstrap support for Q29IW6 as seed ortholog is 87%.

Group of orthologs #1412. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 D.pseudoobscura:137

G3J486              	100.00%		B5DZH8              	100.00%
Bootstrap support for G3J486 as seed ortholog is 100%.
Bootstrap support for B5DZH8 as seed ortholog is 100%.

Group of orthologs #1413. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 D.pseudoobscura:137

G3JI67              	100.00%		Q29EZ4              	100.00%
Bootstrap support for G3JI67 as seed ortholog is 100%.
Bootstrap support for Q29EZ4 as seed ortholog is 100%.

Group of orthologs #1414. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:6 D.pseudoobscura:78

G3JD51              	100.00%		Q2LZ86              	100.00%
Bootstrap support for G3JD51 as seed ortholog is 57%.
Alternative seed ortholog is G3JH96 (6 bits away from this cluster)
Bootstrap support for Q2LZ86 as seed ortholog is 99%.

Group of orthologs #1415. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 D.pseudoobscura:137

G3JLD8              	100.00%		Q29PI6              	100.00%
Bootstrap support for G3JLD8 as seed ortholog is 100%.
Bootstrap support for Q29PI6 as seed ortholog is 100%.

Group of orthologs #1416. Best score 137 bits
Score difference with first non-orthologous sequence - C.militaris:137 D.pseudoobscura:137

G3JN06              	100.00%		Q2LYW0              	100.00%
Bootstrap support for G3JN06 as seed ortholog is 100%.
Bootstrap support for Q2LYW0 as seed ortholog is 100%.

Group of orthologs #1417. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:29

G3J715              	100.00%		Q29IM4              	100.00%
G3JGE0              	20.86%		Q293R1              	11.68%
G3JPY9              	13.72%		B5DL72              	10.70%
G3J956              	11.75%		Q293R0              	6.06%
Bootstrap support for G3J715 as seed ortholog is 97%.
Bootstrap support for Q29IM4 as seed ortholog is 70%.
Alternative seed ortholog is Q290B2 (29 bits away from this cluster)

Group of orthologs #1418. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3J330              	100.00%		Q295M3              	100.00%
Bootstrap support for G3J330 as seed ortholog is 100%.
Bootstrap support for Q295M3 as seed ortholog is 100%.

Group of orthologs #1419. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3J9G2              	100.00%		Q298A9              	100.00%
Bootstrap support for G3J9G2 as seed ortholog is 100%.
Bootstrap support for Q298A9 as seed ortholog is 100%.

Group of orthologs #1420. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3JEK8              	100.00%		Q293T4              	100.00%
Bootstrap support for G3JEK8 as seed ortholog is 100%.
Bootstrap support for Q293T4 as seed ortholog is 100%.

Group of orthologs #1421. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3J4J9              	100.00%		Q29IL9              	100.00%
Bootstrap support for G3J4J9 as seed ortholog is 100%.
Bootstrap support for Q29IL9 as seed ortholog is 100%.

Group of orthologs #1422. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3JIW6              	100.00%		Q298M1              	100.00%
Bootstrap support for G3JIW6 as seed ortholog is 100%.
Bootstrap support for Q298M1 as seed ortholog is 100%.

Group of orthologs #1423. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3J871              	100.00%		Q29MV1              	100.00%
Bootstrap support for G3J871 as seed ortholog is 100%.
Bootstrap support for Q29MV1 as seed ortholog is 100%.

Group of orthologs #1424. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:46

G3JU26              	100.00%		Q299A8              	100.00%
Bootstrap support for G3JU26 as seed ortholog is 100%.
Bootstrap support for Q299A8 as seed ortholog is 79%.

Group of orthologs #1425. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:2

G3JTE4              	100.00%		Q29D63              	100.00%
Bootstrap support for G3JTE4 as seed ortholog is 100%.
Bootstrap support for Q29D63 as seed ortholog is 87%.

Group of orthologs #1426. Best score 136 bits
Score difference with first non-orthologous sequence - C.militaris:136 D.pseudoobscura:136

G3JHB1              	100.00%		Q2LZI9              	100.00%
Bootstrap support for G3JHB1 as seed ortholog is 100%.
Bootstrap support for Q2LZI9 as seed ortholog is 100%.

Group of orthologs #1427. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 D.pseudoobscura:135

G3JD01              	100.00%		Q292G6              	100.00%
                    	       		B5DHD2              	16.41%
                    	       		B5DTS5              	16.15%
Bootstrap support for G3JD01 as seed ortholog is 100%.
Bootstrap support for Q292G6 as seed ortholog is 100%.

Group of orthologs #1428. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 D.pseudoobscura:135

G3J4I6              	100.00%		Q29KP2              	100.00%
                    	       		Q29KP3              	28.74%
Bootstrap support for G3J4I6 as seed ortholog is 100%.
Bootstrap support for Q29KP2 as seed ortholog is 100%.

Group of orthologs #1429. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3J2M7              	100.00%		Q29B68              	100.00%
Bootstrap support for G3J2M7 as seed ortholog is 96%.
Bootstrap support for Q29B68 as seed ortholog is 98%.

Group of orthologs #1430. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 D.pseudoobscura:88

G3JJ28              	100.00%		Q29D10              	100.00%
Bootstrap support for G3JJ28 as seed ortholog is 100%.
Bootstrap support for Q29D10 as seed ortholog is 97%.

Group of orthologs #1431. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:135 D.pseudoobscura:91

G3JQC1              	100.00%		Q29EM7              	100.00%
Bootstrap support for G3JQC1 as seed ortholog is 100%.
Bootstrap support for Q29EM7 as seed ortholog is 94%.

Group of orthologs #1432. Best score 135 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:135

G3JP02              	100.00%		Q29KH8              	100.00%
Bootstrap support for G3JP02 as seed ortholog is 99%.
Bootstrap support for Q29KH8 as seed ortholog is 100%.

Group of orthologs #1433. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:3

G3JGL7              	100.00%		B5DZ98              	100.00%
G3JCK3              	100.00%		B5DMG9              	100.00%
G3JD19              	100.00%		Q29HS7              	100.00%
G3JUI6              	100.00%		Q29HB6              	100.00%
G3JQU8              	31.61%		Q292I8              	77.21%
G3JJ01              	13.21%		B5DZ99              	72.42%
G3JT73              	6.66%		Q29NB8              	62.73%
                    	       		Q29CC5              	29.74%
                    	       		Q29JD3              	23.68%
                    	       		Q2LZ03              	23.46%
                    	       		Q292I9              	21.62%
                    	       		B5DIP1              	13.88%
                    	       		B5E1E2              	13.55%
                    	       		B5E1E1              	12.44%
                    	       		B5E1E0              	12.22%
                    	       		Q28WR0              	12.17%
                    	       		B5DKU5              	11.56%
                    	       		B5DVS5              	9.36%
                    	       		B5DIP0              	9.25%
                    	       		Q29AZ5              	8.85%
                    	       		B5DYI1              	6.63%
                    	       		Q297N3              	5.73%
                    	       		B5DYI0              	5.53%
Bootstrap support for G3JGL7 as seed ortholog is 93%.
Bootstrap support for G3JCK3 as seed ortholog is 86%.
Bootstrap support for G3JD19 as seed ortholog is 86%.
Bootstrap support for G3JUI6 as seed ortholog is 79%.
Bootstrap support for B5DZ98 as seed ortholog is 52%.
Alternative seed ortholog is Q292Y1 (3 bits away from this cluster)
Bootstrap support for B5DMG9 as seed ortholog is 67%.
Alternative seed ortholog is Q292Y1 (3 bits away from this cluster)
Bootstrap support for Q29HS7 as seed ortholog is 65%.
Alternative seed ortholog is Q292Y1 (3 bits away from this cluster)
Bootstrap support for Q29HB6 as seed ortholog is 76%.

Group of orthologs #1434. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:65

G3J5L6              	100.00%		B5DXV6              	100.00%
G3JAL5              	12.43%		Q2M000              	8.55%
                    	       		Q29NL9              	7.25%
                    	       		Q29FZ2              	6.71%
Bootstrap support for G3J5L6 as seed ortholog is 90%.
Bootstrap support for B5DXV6 as seed ortholog is 89%.

Group of orthologs #1435. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:134

G3J761              	100.00%		P54363              	100.00%
Bootstrap support for G3J761 as seed ortholog is 100%.
Bootstrap support for P54363 as seed ortholog is 100%.

Group of orthologs #1436. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:134

G3J5M5              	100.00%		Q296B8              	100.00%
Bootstrap support for G3J5M5 as seed ortholog is 100%.
Bootstrap support for Q296B8 as seed ortholog is 100%.

Group of orthologs #1437. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:134

G3J9V6              	100.00%		Q290H7              	100.00%
Bootstrap support for G3J9V6 as seed ortholog is 100%.
Bootstrap support for Q290H7 as seed ortholog is 100%.

Group of orthologs #1438. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:134

G3J6C5              	100.00%		Q2LZ36              	100.00%
Bootstrap support for G3J6C5 as seed ortholog is 100%.
Bootstrap support for Q2LZ36 as seed ortholog is 100%.

Group of orthologs #1439. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:134

G3JNF5              	100.00%		Q296G0              	100.00%
Bootstrap support for G3JNF5 as seed ortholog is 100%.
Bootstrap support for Q296G0 as seed ortholog is 100%.

Group of orthologs #1440. Best score 134 bits
Score difference with first non-orthologous sequence - C.militaris:134 D.pseudoobscura:134

G3JJ32              	100.00%		Q29I50              	100.00%
Bootstrap support for G3JJ32 as seed ortholog is 100%.
Bootstrap support for Q29I50 as seed ortholog is 100%.

Group of orthologs #1441. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3JRD2              	100.00%		Q29GQ3              	100.00%
                    	       		B5DNA4              	46.61%
                    	       		B5DRC5              	34.92%
                    	       		B5DYH5              	25.93%
                    	       		B5E0V4              	24.58%
Bootstrap support for G3JRD2 as seed ortholog is 100%.
Bootstrap support for Q29GQ3 as seed ortholog is 100%.

Group of orthologs #1442. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:80 D.pseudoobscura:133

G3J7R1              	100.00%		B5DZ00              	100.00%
G3JMY2              	9.21%		I5ANM2              	18.38%
                    	       		Q29BP2              	14.77%
Bootstrap support for G3J7R1 as seed ortholog is 95%.
Bootstrap support for B5DZ00 as seed ortholog is 100%.

Group of orthologs #1443. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:133

G3JED8              	100.00%		Q29MK9              	100.00%
                    	       		Q29MK8              	25.66%
                    	       		Q29MU7              	19.62%
Bootstrap support for G3JED8 as seed ortholog is 81%.
Bootstrap support for Q29MK9 as seed ortholog is 100%.

Group of orthologs #1444. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3JII0              	100.00%		B5DXH2              	100.00%
                    	       		Q29CR5              	100.00%
Bootstrap support for G3JII0 as seed ortholog is 100%.
Bootstrap support for B5DXH2 as seed ortholog is 100%.
Bootstrap support for Q29CR5 as seed ortholog is 100%.

Group of orthologs #1445. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3J5K8              	100.00%		Q29A90              	100.00%
                    	       		Q29BT4              	14.29%
Bootstrap support for G3J5K8 as seed ortholog is 100%.
Bootstrap support for Q29A90 as seed ortholog is 100%.

Group of orthologs #1446. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3J987              	100.00%		Q29MT6              	100.00%
                    	       		B5DJK5              	42.76%
Bootstrap support for G3J987 as seed ortholog is 100%.
Bootstrap support for Q29MT6 as seed ortholog is 100%.

Group of orthologs #1447. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3JFS7              	100.00%		Q29HA7              	100.00%
Bootstrap support for G3JFS7 as seed ortholog is 100%.
Bootstrap support for Q29HA7 as seed ortholog is 100%.

Group of orthologs #1448. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3JQZ1              	100.00%		Q29BT6              	100.00%
Bootstrap support for G3JQZ1 as seed ortholog is 100%.
Bootstrap support for Q29BT6 as seed ortholog is 100%.

Group of orthologs #1449. Best score 133 bits
Score difference with first non-orthologous sequence - C.militaris:133 D.pseudoobscura:133

G3JML9              	100.00%		Q29LE0              	100.00%
Bootstrap support for G3JML9 as seed ortholog is 100%.
Bootstrap support for Q29LE0 as seed ortholog is 100%.

Group of orthologs #1450. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:132

G3J3W6              	100.00%		B5DK41              	100.00%
G3J9B8              	7.18%		
Bootstrap support for G3J3W6 as seed ortholog is 94%.
Bootstrap support for B5DK41 as seed ortholog is 100%.

Group of orthologs #1451. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:132

G3J578              	100.00%		Q28X05              	100.00%
Bootstrap support for G3J578 as seed ortholog is 85%.
Bootstrap support for Q28X05 as seed ortholog is 100%.

Group of orthologs #1452. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 D.pseudoobscura:132

G3J9X0              	100.00%		Q28YM1              	100.00%
Bootstrap support for G3J9X0 as seed ortholog is 100%.
Bootstrap support for Q28YM1 as seed ortholog is 100%.

Group of orthologs #1453. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 D.pseudoobscura:132

G3JEF5              	100.00%		Q28Z98              	100.00%
Bootstrap support for G3JEF5 as seed ortholog is 100%.
Bootstrap support for Q28Z98 as seed ortholog is 100%.

Group of orthologs #1454. Best score 132 bits
Score difference with first non-orthologous sequence - C.militaris:132 D.pseudoobscura:132

G3JNZ5              	100.00%		Q291B6              	100.00%
Bootstrap support for G3JNZ5 as seed ortholog is 100%.
Bootstrap support for Q291B6 as seed ortholog is 100%.

Group of orthologs #1455. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:16 D.pseudoobscura:131

G3JGT9              	100.00%		Q299F1              	100.00%
G3JUQ5              	17.55%		Q2LZN1              	49.63%
                    	       		Q2LZN0              	33.37%
                    	       		Q28XL2              	32.73%
                    	       		B5DP18              	31.44%
                    	       		Q29BY5              	29.63%
                    	       		Q28XS4              	26.42%
                    	       		Q28XS3              	24.39%
                    	       		Q29CD2              	21.50%
                    	       		Q29I88              	18.07%
Bootstrap support for G3JGT9 as seed ortholog is 63%.
Alternative seed ortholog is G3JKM8 (16 bits away from this cluster)
Bootstrap support for Q299F1 as seed ortholog is 100%.

Group of orthologs #1456. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3J4A5              	100.00%		B5DL03              	100.00%
G3J2J7              	100.00%		Q29J39              	100.00%
G3JI50              	16.35%		B5DL04              	51.96%
G3JRY3              	15.53%		
Bootstrap support for G3J4A5 as seed ortholog is 100%.
Bootstrap support for G3J2J7 as seed ortholog is 100%.
Bootstrap support for B5DL03 as seed ortholog is 100%.
Bootstrap support for Q29J39 as seed ortholog is 100%.

Group of orthologs #1457. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:23

G3JLZ5              	100.00%		Q29D46              	100.00%
                    	       		B5DRQ8              	59.29%
                    	       		B5DPU2              	43.57%
                    	       		B5DLF9              	20.00%
Bootstrap support for G3JLZ5 as seed ortholog is 97%.
Bootstrap support for Q29D46 as seed ortholog is 82%.

Group of orthologs #1458. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:30 D.pseudoobscura:131

G3JM99              	100.00%		Q29LX7              	100.00%
                    	       		Q29LX8              	39.03%
                    	       		Q297L4              	23.83%
Bootstrap support for G3JM99 as seed ortholog is 80%.
Bootstrap support for Q29LX7 as seed ortholog is 100%.

Group of orthologs #1459. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:131

G3JH03              	100.00%		B5DX52              	100.00%
                    	       		Q29E54              	80.92%
Bootstrap support for G3JH03 as seed ortholog is 99%.
Bootstrap support for B5DX52 as seed ortholog is 100%.

Group of orthologs #1460. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3JC56              	100.00%		Q29JE6              	100.00%
G3JK84              	14.39%		
Bootstrap support for G3JC56 as seed ortholog is 100%.
Bootstrap support for Q29JE6 as seed ortholog is 100%.

Group of orthologs #1461. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3J5E5              	100.00%		B5DMW8              	100.00%
Bootstrap support for G3J5E5 as seed ortholog is 100%.
Bootstrap support for B5DMW8 as seed ortholog is 100%.

Group of orthologs #1462. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:26 D.pseudoobscura:89

G3J3Q2              	100.00%		Q29J33              	100.00%
Bootstrap support for G3J3Q2 as seed ortholog is 80%.
Bootstrap support for Q29J33 as seed ortholog is 97%.

Group of orthologs #1463. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3JLQ5              	100.00%		Q28Z58              	100.00%
Bootstrap support for G3JLQ5 as seed ortholog is 100%.
Bootstrap support for Q28Z58 as seed ortholog is 100%.

Group of orthologs #1464. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3JNX8              	100.00%		Q294K6              	100.00%
Bootstrap support for G3JNX8 as seed ortholog is 100%.
Bootstrap support for Q294K6 as seed ortholog is 100%.

Group of orthologs #1465. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3J6Q2              	100.00%		Q2LYW1              	100.00%
Bootstrap support for G3J6Q2 as seed ortholog is 100%.
Bootstrap support for Q2LYW1 as seed ortholog is 100%.

Group of orthologs #1466. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:65

G3JRF0              	100.00%		Q295E5              	100.00%
Bootstrap support for G3JRF0 as seed ortholog is 100%.
Bootstrap support for Q295E5 as seed ortholog is 98%.

Group of orthologs #1467. Best score 131 bits
Score difference with first non-orthologous sequence - C.militaris:131 D.pseudoobscura:131

G3JJX7              	100.00%		Q29P72              	100.00%
Bootstrap support for G3JJX7 as seed ortholog is 100%.
Bootstrap support for Q29P72 as seed ortholog is 100%.

Group of orthologs #1468. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3JHB3              	100.00%		B5DHS4              	100.00%
                    	       		Q29DH9              	78.57%
Bootstrap support for G3JHB3 as seed ortholog is 100%.
Bootstrap support for B5DHS4 as seed ortholog is 100%.

Group of orthologs #1469. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3J6H4              	100.00%		Q28ZS1              	100.00%
Bootstrap support for G3J6H4 as seed ortholog is 100%.
Bootstrap support for Q28ZS1 as seed ortholog is 100%.

Group of orthologs #1470. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3JK89              	100.00%		Q28Y16              	100.00%
Bootstrap support for G3JK89 as seed ortholog is 100%.
Bootstrap support for Q28Y16 as seed ortholog is 100%.

Group of orthologs #1471. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3JH89              	100.00%		Q295T8              	100.00%
Bootstrap support for G3JH89 as seed ortholog is 100%.
Bootstrap support for Q295T8 as seed ortholog is 100%.

Group of orthologs #1472. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3J949              	100.00%		Q29LG3              	100.00%
Bootstrap support for G3J949 as seed ortholog is 100%.
Bootstrap support for Q29LG3 as seed ortholog is 100%.

Group of orthologs #1473. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3J8G7              	100.00%		Q2M0N7              	100.00%
Bootstrap support for G3J8G7 as seed ortholog is 100%.
Bootstrap support for Q2M0N7 as seed ortholog is 100%.

Group of orthologs #1474. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:9 D.pseudoobscura:44

G3JHP2              	100.00%		Q29H38              	100.00%
Bootstrap support for G3JHP2 as seed ortholog is 59%.
Alternative seed ortholog is G3J4F2 (9 bits away from this cluster)
Bootstrap support for Q29H38 as seed ortholog is 94%.

Group of orthologs #1475. Best score 130 bits
Score difference with first non-orthologous sequence - C.militaris:130 D.pseudoobscura:130

G3JIH9              	100.00%		Q2M0Y3              	100.00%
Bootstrap support for G3JIH9 as seed ortholog is 100%.
Bootstrap support for Q2M0Y3 as seed ortholog is 100%.

Group of orthologs #1476. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:62

G3JJV2              	100.00%		Q29NR5              	100.00%
G3J623              	10.36%		Q29MQ7              	14.11%
Bootstrap support for G3JJV2 as seed ortholog is 99%.
Bootstrap support for Q29NR5 as seed ortholog is 98%.

Group of orthologs #1477. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:129

G3J3S5              	100.00%		Q29BA0              	100.00%
G3J830              	5.04%		
Bootstrap support for G3J3S5 as seed ortholog is 100%.
Bootstrap support for Q29BA0 as seed ortholog is 100%.

Group of orthologs #1478. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:129

G3JQ45              	100.00%		B5E1L0              	100.00%
                    	       		Q29NV9              	6.04%
Bootstrap support for G3JQ45 as seed ortholog is 100%.
Bootstrap support for B5E1L0 as seed ortholog is 100%.

Group of orthologs #1479. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:129

G3J2L0              	100.00%		Q29J54              	100.00%
Bootstrap support for G3J2L0 as seed ortholog is 100%.
Bootstrap support for Q29J54 as seed ortholog is 100%.

Group of orthologs #1480. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:129

G3JH85              	100.00%		Q29JE8              	100.00%
Bootstrap support for G3JH85 as seed ortholog is 100%.
Bootstrap support for Q29JE8 as seed ortholog is 100%.

Group of orthologs #1481. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:60

G3JN10              	100.00%		Q29K08              	100.00%
Bootstrap support for G3JN10 as seed ortholog is 100%.
Bootstrap support for Q29K08 as seed ortholog is 99%.

Group of orthologs #1482. Best score 129 bits
Score difference with first non-orthologous sequence - C.militaris:129 D.pseudoobscura:129

G3JRH5              	100.00%		Q29IU9              	100.00%
Bootstrap support for G3JRH5 as seed ortholog is 100%.
Bootstrap support for Q29IU9 as seed ortholog is 100%.

Group of orthologs #1483. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 D.pseudoobscura:128

G3J5K9              	100.00%		Q297K6              	100.00%
Bootstrap support for G3J5K9 as seed ortholog is 100%.
Bootstrap support for Q297K6 as seed ortholog is 100%.

Group of orthologs #1484. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 D.pseudoobscura:128

G3JH68              	100.00%		B5E1K4              	100.00%
Bootstrap support for G3JH68 as seed ortholog is 100%.
Bootstrap support for B5E1K4 as seed ortholog is 100%.

Group of orthologs #1485. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:7

G3JHY9              	100.00%		B5E173              	100.00%
Bootstrap support for G3JHY9 as seed ortholog is 99%.
Bootstrap support for B5E173 as seed ortholog is 32%.
Alternative seed ortholog is I5AN10 (7 bits away from this cluster)

Group of orthologs #1486. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 D.pseudoobscura:128

G3J3V0              	100.00%		Q29H00              	100.00%
Bootstrap support for G3J3V0 as seed ortholog is 100%.
Bootstrap support for Q29H00 as seed ortholog is 100%.

Group of orthologs #1487. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 D.pseudoobscura:128

G3JEK4              	100.00%		Q294B7              	100.00%
Bootstrap support for G3JEK4 as seed ortholog is 100%.
Bootstrap support for Q294B7 as seed ortholog is 100%.

Group of orthologs #1488. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 D.pseudoobscura:87

G3JDA0              	100.00%		Q29GB0              	100.00%
Bootstrap support for G3JDA0 as seed ortholog is 100%.
Bootstrap support for Q29GB0 as seed ortholog is 99%.

Group of orthologs #1489. Best score 128 bits
Score difference with first non-orthologous sequence - C.militaris:128 D.pseudoobscura:49

G3JRM9              	100.00%		Q2M010              	100.00%
Bootstrap support for G3JRM9 as seed ortholog is 100%.
Bootstrap support for Q2M010 as seed ortholog is 96%.

Group of orthologs #1490. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 D.pseudoobscura:127

G3J7E7              	100.00%		Q29J96              	100.00%
Bootstrap support for G3J7E7 as seed ortholog is 100%.
Bootstrap support for Q29J96 as seed ortholog is 100%.

Group of orthologs #1491. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:15 D.pseudoobscura:28

G3JDD4              	100.00%		Q29FC4              	100.00%
Bootstrap support for G3JDD4 as seed ortholog is 59%.
Alternative seed ortholog is G3JK72 (15 bits away from this cluster)
Bootstrap support for Q29FC4 as seed ortholog is 80%.

Group of orthologs #1492. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:70

G3J950              	100.00%		Q29KQ0              	100.00%
Bootstrap support for G3J950 as seed ortholog is 80%.
Bootstrap support for Q29KQ0 as seed ortholog is 91%.

Group of orthologs #1493. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:19 D.pseudoobscura:13

G3JFQ8              	100.00%		Q29GF0              	100.00%
Bootstrap support for G3JFQ8 as seed ortholog is 73%.
Alternative seed ortholog is G3JF97 (19 bits away from this cluster)
Bootstrap support for Q29GF0 as seed ortholog is 62%.
Alternative seed ortholog is Q29HP4 (13 bits away from this cluster)

Group of orthologs #1494. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 D.pseudoobscura:127

G3JP52              	100.00%		Q29AF1              	100.00%
Bootstrap support for G3JP52 as seed ortholog is 100%.
Bootstrap support for Q29AF1 as seed ortholog is 100%.

Group of orthologs #1495. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 D.pseudoobscura:127

G3JJR6              	100.00%		Q29FI5              	100.00%
Bootstrap support for G3JJR6 as seed ortholog is 100%.
Bootstrap support for Q29FI5 as seed ortholog is 100%.

Group of orthologs #1496. Best score 127 bits
Score difference with first non-orthologous sequence - C.militaris:127 D.pseudoobscura:127

G3JTP7              	100.00%		Q2M0K5              	100.00%
Bootstrap support for G3JTP7 as seed ortholog is 100%.
Bootstrap support for Q2M0K5 as seed ortholog is 100%.

Group of orthologs #1497. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 D.pseudoobscura:126

G3JN97              	100.00%		B5DWQ2              	100.00%
                    	       		Q294E6              	56.43%
                    	       		B5DPF3              	38.99%
                    	       		Q29CP1              	6.10%
Bootstrap support for G3JN97 as seed ortholog is 100%.
Bootstrap support for B5DWQ2 as seed ortholog is 100%.

Group of orthologs #1498. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 D.pseudoobscura:126

G3JAR8              	100.00%		Q29IT8              	100.00%
                    	       		B5DV51              	94.21%
                    	       		Q298M9              	46.32%
                    	       		B5DII6              	24.21%
Bootstrap support for G3JAR8 as seed ortholog is 100%.
Bootstrap support for Q29IT8 as seed ortholog is 100%.

Group of orthologs #1499. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 D.pseudoobscura:126

G3J6S9              	100.00%		Q29KZ4              	100.00%
                    	       		Q29E09              	26.23%
Bootstrap support for G3J6S9 as seed ortholog is 100%.
Bootstrap support for Q29KZ4 as seed ortholog is 100%.

Group of orthologs #1500. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 D.pseudoobscura:126

G3JB39              	100.00%		B5DZ74              	100.00%
Bootstrap support for G3JB39 as seed ortholog is 100%.
Bootstrap support for B5DZ74 as seed ortholog is 100%.

Group of orthologs #1501. Best score 126 bits
Score difference with first non-orthologous sequence - C.militaris:126 D.pseudoobscura:126

G3J2P2              	100.00%		Q2LZ67              	100.00%
Bootstrap support for G3J2P2 as seed ortholog is 100%.
Bootstrap support for Q2LZ67 as seed ortholog is 100%.

Group of orthologs #1502. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:125

G3JFI2              	100.00%		Q294N7              	100.00%
                    	       		B5DWA6              	28.62%
                    	       		B5DWA8              	27.29%
                    	       		Q294N5              	26.88%
                    	       		Q290I1              	25.46%
                    	       		Q294P3              	24.44%
                    	       		Q294P1              	23.93%
                    	       		Q294N9              	23.93%
                    	       		Q294P4              	23.52%
                    	       		Q294N6              	23.22%
                    	       		Q294P0              	23.12%
                    	       		B5DWA7              	21.38%
Bootstrap support for G3JFI2 as seed ortholog is 84%.
Bootstrap support for Q294N7 as seed ortholog is 100%.

Group of orthologs #1503. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 D.pseudoobscura:125

G3JUC6              	100.00%		Q29CR4              	100.00%
                    	       		Q293B7              	48.04%
                    	       		B5DL65              	42.74%
Bootstrap support for G3JUC6 as seed ortholog is 100%.
Bootstrap support for Q29CR4 as seed ortholog is 100%.

Group of orthologs #1504. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 D.pseudoobscura:125

G3J6D1              	100.00%		Q292A6              	100.00%
Bootstrap support for G3J6D1 as seed ortholog is 100%.
Bootstrap support for Q292A6 as seed ortholog is 100%.

Group of orthologs #1505. Best score 125 bits
Score difference with first non-orthologous sequence - C.militaris:125 D.pseudoobscura:125

G3JL84              	100.00%		Q29FL1              	100.00%
Bootstrap support for G3JL84 as seed ortholog is 100%.
Bootstrap support for Q29FL1 as seed ortholog is 100%.

Group of orthologs #1506. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:124

G3J359              	100.00%		Q28XJ6              	100.00%
Bootstrap support for G3J359 as seed ortholog is 100%.
Bootstrap support for Q28XJ6 as seed ortholog is 100%.

Group of orthologs #1507. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:65

G3J4G3              	100.00%		Q29JF5              	100.00%
Bootstrap support for G3J4G3 as seed ortholog is 100%.
Bootstrap support for Q29JF5 as seed ortholog is 93%.

Group of orthologs #1508. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:124

G3JPI8              	100.00%		Q294D9              	100.00%
Bootstrap support for G3JPI8 as seed ortholog is 100%.
Bootstrap support for Q294D9 as seed ortholog is 100%.

Group of orthologs #1509. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:124

G3JFN3              	100.00%		Q29HR5              	100.00%
Bootstrap support for G3JFN3 as seed ortholog is 100%.
Bootstrap support for Q29HR5 as seed ortholog is 100%.

Group of orthologs #1510. Best score 124 bits
Score difference with first non-orthologous sequence - C.militaris:124 D.pseudoobscura:124

G3JV03              	100.00%		Q29P63              	100.00%
Bootstrap support for G3JV03 as seed ortholog is 100%.
Bootstrap support for Q29P63 as seed ortholog is 100%.

Group of orthologs #1511. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 D.pseudoobscura:45

G3J7X0              	100.00%		Q2LZ18              	100.00%
                    	       		Q29E41              	22.50%
                    	       		Q29E42              	19.62%
                    	       		Q2LZ19              	16.73%
                    	       		B5E0I1              	14.81%
Bootstrap support for G3J7X0 as seed ortholog is 100%.
Bootstrap support for Q2LZ18 as seed ortholog is 88%.

Group of orthologs #1512. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:12 D.pseudoobscura:123

G3JI76              	100.00%		Q2LZD6              	100.00%
                    	       		Q2M097              	43.38%
                    	       		Q2M096              	38.49%
                    	       		B5DLS8              	31.07%
Bootstrap support for G3JI76 as seed ortholog is 57%.
Alternative seed ortholog is G3J7V0 (12 bits away from this cluster)
Bootstrap support for Q2LZD6 as seed ortholog is 100%.

Group of orthologs #1513. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 D.pseudoobscura:123

G3J7A4              	100.00%		Q295I4              	100.00%
                    	       		B5E1N0              	22.95%
Bootstrap support for G3J7A4 as seed ortholog is 100%.
Bootstrap support for Q295I4 as seed ortholog is 100%.

Group of orthologs #1514. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 D.pseudoobscura:123

G3JQ96              	100.00%		Q290X2              	100.00%
Bootstrap support for G3JQ96 as seed ortholog is 100%.
Bootstrap support for Q290X2 as seed ortholog is 100%.

Group of orthologs #1515. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 D.pseudoobscura:123

G3JRR4              	100.00%		Q293T3              	100.00%
Bootstrap support for G3JRR4 as seed ortholog is 100%.
Bootstrap support for Q293T3 as seed ortholog is 100%.

Group of orthologs #1516. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 D.pseudoobscura:123

G3J9T1              	100.00%		Q29P96              	100.00%
Bootstrap support for G3J9T1 as seed ortholog is 100%.
Bootstrap support for Q29P96 as seed ortholog is 100%.

Group of orthologs #1517. Best score 123 bits
Score difference with first non-orthologous sequence - C.militaris:123 D.pseudoobscura:80

G3JMV0              	100.00%		Q29BS2              	100.00%
Bootstrap support for G3JMV0 as seed ortholog is 100%.
Bootstrap support for Q29BS2 as seed ortholog is 99%.

Group of orthologs #1518. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 D.pseudoobscura:122

G3JKQ7              	100.00%		Q29LF3              	100.00%
G3JS19              	23.01%		B5DUY5              	88.47%
                    	       		Q29LK4              	18.77%
                    	       		B5DIZ9              	17.16%
                    	       		Q29LF2              	17.16%
Bootstrap support for G3JKQ7 as seed ortholog is 100%.
Bootstrap support for Q29LF3 as seed ortholog is 100%.

Group of orthologs #1519. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 D.pseudoobscura:64

G3J3V9              	100.00%		Q29FG4              	100.00%
Bootstrap support for G3J3V9 as seed ortholog is 100%.
Bootstrap support for Q29FG4 as seed ortholog is 99%.

Group of orthologs #1520. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 D.pseudoobscura:122

G3JGK7              	100.00%		Q29MW0              	100.00%
Bootstrap support for G3JGK7 as seed ortholog is 100%.
Bootstrap support for Q29MW0 as seed ortholog is 100%.

Group of orthologs #1521. Best score 122 bits
Score difference with first non-orthologous sequence - C.militaris:122 D.pseudoobscura:30

G3JL81              	100.00%		Q29LT5              	100.00%
Bootstrap support for G3JL81 as seed ortholog is 100%.
Bootstrap support for Q29LT5 as seed ortholog is 99%.

Group of orthologs #1522. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:1 D.pseudoobscura:121

G3J6X7              	100.00%		Q29NA6              	100.00%
                    	       		Q293Y7              	33.95%
                    	       		Q29NA5              	17.02%
                    	       		Q29BQ2              	12.84%
                    	       		B5DZ86              	10.88%
                    	       		B5DVH8              	7.16%
Bootstrap support for G3J6X7 as seed ortholog is 60%.
Alternative seed ortholog is G3J2V6 (1 bits away from this cluster)
Bootstrap support for Q29NA6 as seed ortholog is 100%.

Group of orthologs #1523. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:30 D.pseudoobscura:77

G3J6Y9              	100.00%		Q295B2              	100.00%
                    	       		B5DVX0              	74.14%
Bootstrap support for G3J6Y9 as seed ortholog is 82%.
Bootstrap support for Q295B2 as seed ortholog is 99%.

Group of orthologs #1524. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:121

G3J9E6              	100.00%		B5DL57              	100.00%
Bootstrap support for G3J9E6 as seed ortholog is 91%.
Bootstrap support for B5DL57 as seed ortholog is 100%.

Group of orthologs #1525. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3J2Q1              	100.00%		Q294L2              	100.00%
Bootstrap support for G3J2Q1 as seed ortholog is 100%.
Bootstrap support for Q294L2 as seed ortholog is 100%.

Group of orthologs #1526. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3J588              	100.00%		Q297S9              	100.00%
Bootstrap support for G3J588 as seed ortholog is 100%.
Bootstrap support for Q297S9 as seed ortholog is 100%.

Group of orthologs #1527. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:5 D.pseudoobscura:121

G3J7Y9              	100.00%		Q29AS7              	100.00%
Bootstrap support for G3J7Y9 as seed ortholog is 39%.
Alternative seed ortholog is G3JRV0 (5 bits away from this cluster)
Bootstrap support for Q29AS7 as seed ortholog is 100%.

Group of orthologs #1528. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3JBF9              	100.00%		Q298X4              	100.00%
Bootstrap support for G3JBF9 as seed ortholog is 100%.
Bootstrap support for Q298X4 as seed ortholog is 100%.

Group of orthologs #1529. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3JK53              	100.00%		Q28XI7              	100.00%
Bootstrap support for G3JK53 as seed ortholog is 100%.
Bootstrap support for Q28XI7 as seed ortholog is 100%.

Group of orthologs #1530. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3JJE0              	100.00%		Q290L3              	100.00%
Bootstrap support for G3JJE0 as seed ortholog is 100%.
Bootstrap support for Q290L3 as seed ortholog is 100%.

Group of orthologs #1531. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3JLJ1              	100.00%		Q29BZ1              	100.00%
Bootstrap support for G3JLJ1 as seed ortholog is 100%.
Bootstrap support for Q29BZ1 as seed ortholog is 100%.

Group of orthologs #1532. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:121

G3JI59              	100.00%		Q29KX0              	100.00%
Bootstrap support for G3JI59 as seed ortholog is 100%.
Bootstrap support for Q29KX0 as seed ortholog is 100%.

Group of orthologs #1533. Best score 121 bits
Score difference with first non-orthologous sequence - C.militaris:121 D.pseudoobscura:13

G3JK54              	100.00%		Q29J64              	100.00%
Bootstrap support for G3JK54 as seed ortholog is 100%.
Bootstrap support for Q29J64 as seed ortholog is 65%.
Alternative seed ortholog is Q29BN6 (13 bits away from this cluster)

Group of orthologs #1534. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:17 D.pseudoobscura:120

G3J3Z8              	100.00%		Q2LZZ0              	100.00%
Bootstrap support for G3J3Z8 as seed ortholog is 62%.
Alternative seed ortholog is G3JHF4 (17 bits away from this cluster)
Bootstrap support for Q2LZZ0 as seed ortholog is 100%.

Group of orthologs #1535. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 D.pseudoobscura:120

G3J9K7              	100.00%		Q29MW3              	100.00%
Bootstrap support for G3J9K7 as seed ortholog is 100%.
Bootstrap support for Q29MW3 as seed ortholog is 100%.

Group of orthologs #1536. Best score 120 bits
Score difference with first non-orthologous sequence - C.militaris:120 D.pseudoobscura:24

G3JQG4              	100.00%		Q29F91              	100.00%
Bootstrap support for G3JQG4 as seed ortholog is 100%.
Bootstrap support for Q29F91 as seed ortholog is 82%.

Group of orthologs #1537. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 D.pseudoobscura:119

G3J9F1              	100.00%		Q29PH7              	100.00%
G3JSL9              	37.11%		
Bootstrap support for G3J9F1 as seed ortholog is 100%.
Bootstrap support for Q29PH7 as seed ortholog is 100%.

Group of orthologs #1538. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 D.pseudoobscura:68

G3JD86              	100.00%		Q29A89              	100.00%
Bootstrap support for G3JD86 as seed ortholog is 100%.
Bootstrap support for Q29A89 as seed ortholog is 98%.

Group of orthologs #1539. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 D.pseudoobscura:45

G3JLS5              	100.00%		Q296G5              	100.00%
Bootstrap support for G3JLS5 as seed ortholog is 100%.
Bootstrap support for Q296G5 as seed ortholog is 100%.

Group of orthologs #1540. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:32 D.pseudoobscura:119

G3JCL5              	100.00%		Q29M05              	100.00%
Bootstrap support for G3JCL5 as seed ortholog is 80%.
Bootstrap support for Q29M05 as seed ortholog is 100%.

Group of orthologs #1541. Best score 119 bits
Score difference with first non-orthologous sequence - C.militaris:119 D.pseudoobscura:119

G3JIH4              	100.00%		Q29I17              	100.00%
Bootstrap support for G3JIH4 as seed ortholog is 100%.
Bootstrap support for Q29I17 as seed ortholog is 100%.

Group of orthologs #1542. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3J4R1              	100.00%		B5DPT4              	100.00%
                    	       		Q29A69              	63.45%
                    	       		Q298M7              	38.88%
Bootstrap support for G3J4R1 as seed ortholog is 100%.
Bootstrap support for B5DPT4 as seed ortholog is 100%.

Group of orthologs #1543. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3J5B5              	100.00%		Q29J99              	100.00%
G3JEK6              	13.23%		
Bootstrap support for G3J5B5 as seed ortholog is 100%.
Bootstrap support for Q29J99 as seed ortholog is 100%.

Group of orthologs #1544. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3JUQ2              	100.00%		B5DX54              	100.00%
                    	       		B5DYD5              	100.00%
Bootstrap support for G3JUQ2 as seed ortholog is 100%.
Bootstrap support for B5DX54 as seed ortholog is 100%.
Bootstrap support for B5DYD5 as seed ortholog is 100%.

Group of orthologs #1545. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3JBU3              	100.00%		Q29H37              	100.00%
                    	       		Q29PF8              	7.79%
Bootstrap support for G3JBU3 as seed ortholog is 100%.
Bootstrap support for Q29H37 as seed ortholog is 100%.

Group of orthologs #1546. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3JCS8              	100.00%		B5DTF8              	100.00%
Bootstrap support for G3JCS8 as seed ortholog is 100%.
Bootstrap support for B5DTF8 as seed ortholog is 100%.

Group of orthologs #1547. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:24

G3JH90              	100.00%		B5DP05              	100.00%
Bootstrap support for G3JH90 as seed ortholog is 100%.
Bootstrap support for B5DP05 as seed ortholog is 87%.

Group of orthologs #1548. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3J595              	100.00%		Q296L8              	100.00%
Bootstrap support for G3J595 as seed ortholog is 100%.
Bootstrap support for Q296L8 as seed ortholog is 100%.

Group of orthologs #1549. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:42 D.pseudoobscura:37

G3J7C0              	100.00%		Q295J9              	100.00%
Bootstrap support for G3J7C0 as seed ortholog is 96%.
Bootstrap support for Q295J9 as seed ortholog is 96%.

Group of orthologs #1550. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3JBG1              	100.00%		Q290Q3              	100.00%
Bootstrap support for G3JBG1 as seed ortholog is 100%.
Bootstrap support for Q290Q3 as seed ortholog is 100%.

Group of orthologs #1551. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3JJ23              	100.00%		Q29LU0              	100.00%
Bootstrap support for G3JJ23 as seed ortholog is 100%.
Bootstrap support for Q29LU0 as seed ortholog is 100%.

Group of orthologs #1552. Best score 118 bits
Score difference with first non-orthologous sequence - C.militaris:118 D.pseudoobscura:118

G3JPQ2              	100.00%		Q29KG9              	100.00%
Bootstrap support for G3JPQ2 as seed ortholog is 100%.
Bootstrap support for Q29KG9 as seed ortholog is 100%.

Group of orthologs #1553. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:43

G3JMT1              	100.00%		B5DWP4              	100.00%
                    	       		B5DR49              	90.00%
                    	       		B5DMF7              	84.55%
                    	       		B5DLP0              	7.27%
Bootstrap support for G3JMT1 as seed ortholog is 100%.
Bootstrap support for B5DWP4 as seed ortholog is 98%.

Group of orthologs #1554. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:32 D.pseudoobscura:117

G3JBI7              	100.00%		Q29D42              	100.00%
G3JNY3              	100.00%		
G3J8H2              	11.23%		
Bootstrap support for G3JBI7 as seed ortholog is 78%.
Bootstrap support for G3JNY3 as seed ortholog is 78%.
Bootstrap support for Q29D42 as seed ortholog is 100%.

Group of orthologs #1555. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JBH3              	100.00%		Q28XR3              	100.00%
G3JAE7              	50.90%		
Bootstrap support for G3JBH3 as seed ortholog is 100%.
Bootstrap support for Q28XR3 as seed ortholog is 100%.

Group of orthologs #1556. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JIF7              	100.00%		Q29GF6              	100.00%
G3J4M8              	40.18%		
Bootstrap support for G3JIF7 as seed ortholog is 100%.
Bootstrap support for Q29GF6 as seed ortholog is 100%.

Group of orthologs #1557. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JJE4              	100.00%		I5ANI6              	100.00%
Bootstrap support for G3JJE4 as seed ortholog is 100%.
Bootstrap support for I5ANI6 as seed ortholog is 100%.

Group of orthologs #1558. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:42 D.pseudoobscura:2

G3J5M4              	100.00%		Q29IK5              	100.00%
Bootstrap support for G3J5M4 as seed ortholog is 91%.
Bootstrap support for Q29IK5 as seed ortholog is 47%.
Alternative seed ortholog is B5DLH3 (2 bits away from this cluster)

Group of orthologs #1559. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JKQ8              	100.00%		Q295W5              	100.00%
Bootstrap support for G3JKQ8 as seed ortholog is 100%.
Bootstrap support for Q295W5 as seed ortholog is 100%.

Group of orthologs #1560. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JM70              	100.00%		Q29DL0              	100.00%
Bootstrap support for G3JM70 as seed ortholog is 100%.
Bootstrap support for Q29DL0 as seed ortholog is 100%.

Group of orthologs #1561. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JFE0              	100.00%		Q29NS6              	100.00%
Bootstrap support for G3JFE0 as seed ortholog is 100%.
Bootstrap support for Q29NS6 as seed ortholog is 100%.

Group of orthologs #1562. Best score 117 bits
Score difference with first non-orthologous sequence - C.militaris:117 D.pseudoobscura:117

G3JPI3              	100.00%		Q29H98              	100.00%
Bootstrap support for G3JPI3 as seed ortholog is 100%.
Bootstrap support for Q29H98 as seed ortholog is 100%.

Group of orthologs #1563. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3JU14              	100.00%		Q2LZX6              	100.00%
G3JCK8              	100.00%		Q29NF6              	100.00%
Bootstrap support for G3JU14 as seed ortholog is 100%.
Bootstrap support for G3JCK8 as seed ortholog is 100%.
Bootstrap support for Q2LZX6 as seed ortholog is 100%.
Bootstrap support for Q29NF6 as seed ortholog is 100%.

Group of orthologs #1564. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:7

G3J722              	100.00%		B5E128              	100.00%
Bootstrap support for G3J722 as seed ortholog is 100%.
Bootstrap support for B5E128 as seed ortholog is 64%.
Alternative seed ortholog is Q296T5 (7 bits away from this cluster)

Group of orthologs #1565. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3J501              	100.00%		Q292F0              	100.00%
Bootstrap support for G3J501 as seed ortholog is 100%.
Bootstrap support for Q292F0 as seed ortholog is 100%.

Group of orthologs #1566. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3J661              	100.00%		Q293Y0              	100.00%
Bootstrap support for G3J661 as seed ortholog is 100%.
Bootstrap support for Q293Y0 as seed ortholog is 100%.

Group of orthologs #1567. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3JV11              	100.00%		Q290H1              	100.00%
Bootstrap support for G3JV11 as seed ortholog is 100%.
Bootstrap support for Q290H1 as seed ortholog is 100%.

Group of orthologs #1568. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3J9F8              	100.00%		Q2M052              	100.00%
Bootstrap support for G3J9F8 as seed ortholog is 100%.
Bootstrap support for Q2M052 as seed ortholog is 100%.

Group of orthologs #1569. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3JHN5              	100.00%		Q29I12              	100.00%
Bootstrap support for G3JHN5 as seed ortholog is 100%.
Bootstrap support for Q29I12 as seed ortholog is 100%.

Group of orthologs #1570. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3JK60              	100.00%		Q2LZQ2              	100.00%
Bootstrap support for G3JK60 as seed ortholog is 100%.
Bootstrap support for Q2LZQ2 as seed ortholog is 100%.

Group of orthologs #1571. Best score 116 bits
Score difference with first non-orthologous sequence - C.militaris:116 D.pseudoobscura:116

G3JUU1              	100.00%		Q29IT3              	100.00%
Bootstrap support for G3JUU1 as seed ortholog is 100%.
Bootstrap support for Q29IT3 as seed ortholog is 100%.

Group of orthologs #1572. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 D.pseudoobscura:115

G3J5X2              	100.00%		Q29J42              	100.00%
                    	       		B5DLJ4              	77.45%
                    	       		B5DXX7              	46.50%
Bootstrap support for G3J5X2 as seed ortholog is 100%.
Bootstrap support for Q29J42 as seed ortholog is 100%.

Group of orthologs #1573. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 D.pseudoobscura:72

G3JDY1              	100.00%		O44091              	100.00%
                    	       		B5DW05              	28.06%
Bootstrap support for G3JDY1 as seed ortholog is 100%.
Bootstrap support for O44091 as seed ortholog is 99%.

Group of orthologs #1574. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 D.pseudoobscura:115

G3J8T2              	100.00%		Q29ET2              	100.00%
                    	       		Q290U8              	15.28%
Bootstrap support for G3J8T2 as seed ortholog is 100%.
Bootstrap support for Q29ET2 as seed ortholog is 100%.

Group of orthologs #1575. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 D.pseudoobscura:27

G3J463              	100.00%		Q28ZY2              	100.00%
Bootstrap support for G3J463 as seed ortholog is 100%.
Bootstrap support for Q28ZY2 as seed ortholog is 81%.

Group of orthologs #1576. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 D.pseudoobscura:34

G3J528              	100.00%		Q29L90              	100.00%
Bootstrap support for G3J528 as seed ortholog is 100%.
Bootstrap support for Q29L90 as seed ortholog is 88%.

Group of orthologs #1577. Best score 115 bits
Score difference with first non-orthologous sequence - C.militaris:115 D.pseudoobscura:115

G3JUM5              	100.00%		Q294L0              	100.00%
Bootstrap support for G3JUM5 as seed ortholog is 100%.
Bootstrap support for Q294L0 as seed ortholog is 100%.

Group of orthologs #1578. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 D.pseudoobscura:56

G3JUJ8              	100.00%		Q2LZ24              	100.00%
G3JRE4              	40.97%		B5DQ69              	37.77%
                    	       		B5DQ67              	33.95%
                    	       		Q293E6              	23.16%
Bootstrap support for G3JUJ8 as seed ortholog is 100%.
Bootstrap support for Q2LZ24 as seed ortholog is 84%.

Group of orthologs #1579. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 D.pseudoobscura:51

G3JQA2              	100.00%		B5DLY8              	100.00%
                    	       		B5DIR4              	67.33%
                    	       		B5DIR9              	17.24%
Bootstrap support for G3JQA2 as seed ortholog is 100%.
Bootstrap support for B5DLY8 as seed ortholog is 82%.

Group of orthologs #1580. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 D.pseudoobscura:114

G3J824              	100.00%		Q298W5              	100.00%
Bootstrap support for G3J824 as seed ortholog is 100%.
Bootstrap support for Q298W5 as seed ortholog is 100%.

Group of orthologs #1581. Best score 114 bits
Score difference with first non-orthologous sequence - C.militaris:114 D.pseudoobscura:114

G3JJD3              	100.00%		Q29IG5              	100.00%
Bootstrap support for G3JJD3 as seed ortholog is 100%.
Bootstrap support for Q29IG5 as seed ortholog is 100%.

Group of orthologs #1582. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:62

G3J3L3              	100.00%		Q295V2              	100.00%
                    	       		Q297P9              	15.68%
Bootstrap support for G3J3L3 as seed ortholog is 100%.
Bootstrap support for Q295V2 as seed ortholog is 95%.

Group of orthologs #1583. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:42 D.pseudoobscura:113

G3J7E6              	100.00%		Q291I9              	100.00%
                    	       		B5E021              	16.23%
Bootstrap support for G3J7E6 as seed ortholog is 85%.
Bootstrap support for Q291I9 as seed ortholog is 100%.

Group of orthologs #1584. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3J8G3              	100.00%		B5DJL0              	100.00%
Bootstrap support for G3J8G3 as seed ortholog is 100%.
Bootstrap support for B5DJL0 as seed ortholog is 100%.

Group of orthologs #1585. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JE38              	100.00%		B5DWG8              	100.00%
Bootstrap support for G3JE38 as seed ortholog is 100%.
Bootstrap support for B5DWG8 as seed ortholog is 100%.

Group of orthologs #1586. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JET3              	100.00%		I7M3J1              	100.00%
Bootstrap support for G3JET3 as seed ortholog is 100%.
Bootstrap support for I7M3J1 as seed ortholog is 100%.

Group of orthologs #1587. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:64

G3J8E8              	100.00%		Q298E6              	100.00%
Bootstrap support for G3J8E8 as seed ortholog is 100%.
Bootstrap support for Q298E6 as seed ortholog is 99%.

Group of orthologs #1588. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3J5Z1              	100.00%		Q29BT5              	100.00%
Bootstrap support for G3J5Z1 as seed ortholog is 100%.
Bootstrap support for Q29BT5 as seed ortholog is 100%.

Group of orthologs #1589. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JG55              	100.00%		Q28XW6              	100.00%
Bootstrap support for G3JG55 as seed ortholog is 100%.
Bootstrap support for Q28XW6 as seed ortholog is 100%.

Group of orthologs #1590. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JCE3              	100.00%		Q294Y5              	100.00%
Bootstrap support for G3JCE3 as seed ortholog is 100%.
Bootstrap support for Q294Y5 as seed ortholog is 100%.

Group of orthologs #1591. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JAC6              	100.00%		Q29AU5              	100.00%
Bootstrap support for G3JAC6 as seed ortholog is 100%.
Bootstrap support for Q29AU5 as seed ortholog is 100%.

Group of orthologs #1592. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JA19              	100.00%		Q29ES9              	100.00%
Bootstrap support for G3JA19 as seed ortholog is 100%.
Bootstrap support for Q29ES9 as seed ortholog is 100%.

Group of orthologs #1593. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3J7Q2              	100.00%		Q29KP1              	100.00%
Bootstrap support for G3J7Q2 as seed ortholog is 100%.
Bootstrap support for Q29KP1 as seed ortholog is 100%.

Group of orthologs #1594. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JAR0              	100.00%		Q29LQ3              	100.00%
Bootstrap support for G3JAR0 as seed ortholog is 100%.
Bootstrap support for Q29LQ3 as seed ortholog is 100%.

Group of orthologs #1595. Best score 113 bits
Score difference with first non-orthologous sequence - C.militaris:113 D.pseudoobscura:113

G3JSZ2              	100.00%		Q29AH6              	100.00%
Bootstrap support for G3JSZ2 as seed ortholog is 100%.
Bootstrap support for Q29AH6 as seed ortholog is 100%.

Group of orthologs #1596. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:112

G3J6H9              	100.00%		Q297A7              	100.00%
Bootstrap support for G3J6H9 as seed ortholog is 100%.
Bootstrap support for Q297A7 as seed ortholog is 100%.

Group of orthologs #1597. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:112

G3JE71              	100.00%		Q28ZN2              	100.00%
Bootstrap support for G3JE71 as seed ortholog is 100%.
Bootstrap support for Q28ZN2 as seed ortholog is 100%.

Group of orthologs #1598. Best score 112 bits
Score difference with first non-orthologous sequence - C.militaris:112 D.pseudoobscura:112

G3JN52              	100.00%		Q298I3              	100.00%
Bootstrap support for G3JN52 as seed ortholog is 100%.
Bootstrap support for Q298I3 as seed ortholog is 100%.

Group of orthologs #1599. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:3 D.pseudoobscura:111

G3JCF1              	100.00%		Q28WJ8              	100.00%
G3JGT0              	25.15%		B5DZL8              	54.28%
Bootstrap support for G3JCF1 as seed ortholog is 54%.
Alternative seed ortholog is G3JFK9 (3 bits away from this cluster)
Bootstrap support for Q28WJ8 as seed ortholog is 100%.

Group of orthologs #1600. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JN65              	100.00%		Q294W4              	100.00%
                    	       		B5DV76              	7.28%
                    	       		Q29P94              	7.15%
Bootstrap support for G3JN65 as seed ortholog is 100%.
Bootstrap support for Q294W4 as seed ortholog is 100%.

Group of orthologs #1601. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JH95              	100.00%		Q2LZQ6              	100.00%
                    	       		B5E1I7              	56.06%
                    	       		Q29GJ4              	10.97%
Bootstrap support for G3JH95 as seed ortholog is 100%.
Bootstrap support for Q2LZQ6 as seed ortholog is 100%.

Group of orthologs #1602. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:55

G3J990              	100.00%		Q28XJ5              	100.00%
Bootstrap support for G3J990 as seed ortholog is 99%.
Bootstrap support for Q28XJ5 as seed ortholog is 98%.

Group of orthologs #1603. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JHU2              	100.00%		Q28YK0              	100.00%
Bootstrap support for G3JHU2 as seed ortholog is 100%.
Bootstrap support for Q28YK0 as seed ortholog is 100%.

Group of orthologs #1604. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:35 D.pseudoobscura:37

G3J8R4              	100.00%		Q29JC7              	100.00%
Bootstrap support for G3J8R4 as seed ortholog is 71%.
Alternative seed ortholog is G3JQH0 (35 bits away from this cluster)
Bootstrap support for Q29JC7 as seed ortholog is 56%.
Alternative seed ortholog is Q29I81 (37 bits away from this cluster)

Group of orthologs #1605. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JH69              	100.00%		Q29BE4              	100.00%
Bootstrap support for G3JH69 as seed ortholog is 100%.
Bootstrap support for Q29BE4 as seed ortholog is 100%.

Group of orthologs #1606. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JU70              	100.00%		Q28XN6              	100.00%
Bootstrap support for G3JU70 as seed ortholog is 100%.
Bootstrap support for Q28XN6 as seed ortholog is 100%.

Group of orthologs #1607. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JDC1              	100.00%		Q29IG7              	100.00%
Bootstrap support for G3JDC1 as seed ortholog is 100%.
Bootstrap support for Q29IG7 as seed ortholog is 100%.

Group of orthologs #1608. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JTW2              	100.00%		Q28YL0              	100.00%
Bootstrap support for G3JTW2 as seed ortholog is 100%.
Bootstrap support for Q28YL0 as seed ortholog is 100%.

Group of orthologs #1609. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JIJ8              	100.00%		Q29DD9              	100.00%
Bootstrap support for G3JIJ8 as seed ortholog is 100%.
Bootstrap support for Q29DD9 as seed ortholog is 100%.

Group of orthologs #1610. Best score 111 bits
Score difference with first non-orthologous sequence - C.militaris:111 D.pseudoobscura:111

G3JSG3              	100.00%		Q29JM0              	100.00%
Bootstrap support for G3JSG3 as seed ortholog is 100%.
Bootstrap support for Q29JM0 as seed ortholog is 100%.

Group of orthologs #1611. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:11 D.pseudoobscura:16

G3JU10              	100.00%		Q29J08              	100.00%
G3JE79              	10.00%		Q29BD0              	16.41%
Bootstrap support for G3JU10 as seed ortholog is 52%.
Alternative seed ortholog is G3J6G9 (11 bits away from this cluster)
Bootstrap support for Q29J08 as seed ortholog is 60%.
Alternative seed ortholog is Q29B81 (16 bits away from this cluster)

Group of orthologs #1612. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:110

G3JI84              	100.00%		B5DYV2              	100.00%
                    	       		B5DRB9              	87.72%
Bootstrap support for G3JI84 as seed ortholog is 100%.
Bootstrap support for B5DYV2 as seed ortholog is 100%.

Group of orthologs #1613. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:110

G3JCN0              	100.00%		Q290U2              	100.00%
                    	       		B5DL99              	35.44%
Bootstrap support for G3JCN0 as seed ortholog is 100%.
Bootstrap support for Q290U2 as seed ortholog is 100%.

Group of orthologs #1614. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:110

G3JME9              	100.00%		Q29FE6              	100.00%
                    	       		Q29AP0              	23.99%
Bootstrap support for G3JME9 as seed ortholog is 100%.
Bootstrap support for Q29FE6 as seed ortholog is 100%.

Group of orthologs #1615. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:110

G3JHI8              	100.00%		Q293X6              	100.00%
Bootstrap support for G3JHI8 as seed ortholog is 100%.
Bootstrap support for Q293X6 as seed ortholog is 100%.

Group of orthologs #1616. Best score 110 bits
Score difference with first non-orthologous sequence - C.militaris:110 D.pseudoobscura:110

G3JH00              	100.00%		Q29HR8              	100.00%
Bootstrap support for G3JH00 as seed ortholog is 100%.
Bootstrap support for Q29HR8 as seed ortholog is 100%.

Group of orthologs #1617. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:51

G3JAS8              	100.00%		Q2LZM9              	100.00%
G3JP71              	24.13%		
G3JAG6              	23.84%		
Bootstrap support for G3JAS8 as seed ortholog is 83%.
Bootstrap support for Q2LZM9 as seed ortholog is 86%.

Group of orthologs #1618. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:8 D.pseudoobscura:34

G3JHM6              	100.00%		Q29HN2              	100.00%
                    	       		Q28XP5              	23.47%
Bootstrap support for G3JHM6 as seed ortholog is 62%.
Alternative seed ortholog is G3JQF3 (8 bits away from this cluster)
Bootstrap support for Q29HN2 as seed ortholog is 88%.

Group of orthologs #1619. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 D.pseudoobscura:109

G3J5J9              	100.00%		Q29DZ3              	100.00%
Bootstrap support for G3J5J9 as seed ortholog is 100%.
Bootstrap support for Q29DZ3 as seed ortholog is 100%.

Group of orthologs #1620. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 D.pseudoobscura:109

G3J9X6              	100.00%		Q2M037              	100.00%
Bootstrap support for G3J9X6 as seed ortholog is 100%.
Bootstrap support for Q2M037 as seed ortholog is 100%.

Group of orthologs #1621. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 D.pseudoobscura:109

G3JGS9              	100.00%		Q29JJ7              	100.00%
Bootstrap support for G3JGS9 as seed ortholog is 100%.
Bootstrap support for Q29JJ7 as seed ortholog is 100%.

Group of orthologs #1622. Best score 109 bits
Score difference with first non-orthologous sequence - C.militaris:109 D.pseudoobscura:109

G3JC63              	100.00%		Q2LZP7              	100.00%
Bootstrap support for G3JC63 as seed ortholog is 100%.
Bootstrap support for Q2LZP7 as seed ortholog is 100%.

Group of orthologs #1623. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3J827              	100.00%		Q293N6              	100.00%
G3JMT2              	24.72%		Q293N5              	46.45%
                    	       		Q293N4              	30.73%
                    	       		Q29F35              	16.18%
                    	       		B5DUC2              	15.48%
Bootstrap support for G3J827 as seed ortholog is 100%.
Bootstrap support for Q293N6 as seed ortholog is 100%.

Group of orthologs #1624. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3JDR5              	100.00%		B5DW49              	100.00%
Bootstrap support for G3JDR5 as seed ortholog is 100%.
Bootstrap support for B5DW49 as seed ortholog is 100%.

Group of orthologs #1625. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3J6M1              	100.00%		Q296G4              	100.00%
Bootstrap support for G3J6M1 as seed ortholog is 100%.
Bootstrap support for Q296G4 as seed ortholog is 100%.

Group of orthologs #1626. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3J7I8              	100.00%		Q296C6              	100.00%
Bootstrap support for G3J7I8 as seed ortholog is 100%.
Bootstrap support for Q296C6 as seed ortholog is 100%.

Group of orthologs #1627. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3J4F3              	100.00%		Q29N70              	100.00%
Bootstrap support for G3J4F3 as seed ortholog is 100%.
Bootstrap support for Q29N70 as seed ortholog is 100%.

Group of orthologs #1628. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3JHM9              	100.00%		Q29AE8              	100.00%
Bootstrap support for G3JHM9 as seed ortholog is 100%.
Bootstrap support for Q29AE8 as seed ortholog is 100%.

Group of orthologs #1629. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:1

G3JGC5              	100.00%		Q29MD5              	100.00%
Bootstrap support for G3JGC5 as seed ortholog is 96%.
Bootstrap support for Q29MD5 as seed ortholog is 53%.
Alternative seed ortholog is Q293Q2 (1 bits away from this cluster)

Group of orthologs #1630. Best score 108 bits
Score difference with first non-orthologous sequence - C.militaris:108 D.pseudoobscura:108

G3JFF8              	100.00%		Q29P67              	100.00%
Bootstrap support for G3JFF8 as seed ortholog is 100%.
Bootstrap support for Q29P67 as seed ortholog is 100%.

Group of orthologs #1631. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:18

G3JGG2              	100.00%		B5DYD8              	100.00%
                    	       		Q29BK2              	25.89%
                    	       		Q29BK5              	24.53%
                    	       		Q295H0              	24.53%
                    	       		Q297P4              	24.37%
                    	       		Q295G9              	23.69%
                    	       		Q29BK4              	15.40%
                    	       		B5DPB4              	10.15%
                    	       		Q299J0              	8.97%
                    	       		Q291X5              	7.61%
                    	       		Q291X4              	6.77%
                    	       		Q299J1              	5.75%
Bootstrap support for G3JGG2 as seed ortholog is 100%.
Bootstrap support for B5DYD8 as seed ortholog is 68%.
Alternative seed ortholog is Q29D49 (18 bits away from this cluster)

Group of orthologs #1632. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:107

G3JD02              	100.00%		Q28ZW6              	100.00%
G3JU07              	10.98%		
G3JP00              	8.83%		
Bootstrap support for G3JD02 as seed ortholog is 100%.
Bootstrap support for Q28ZW6 as seed ortholog is 100%.

Group of orthologs #1633. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:107

G3J774              	100.00%		Q29FL0              	100.00%
Bootstrap support for G3J774 as seed ortholog is 100%.
Bootstrap support for Q29FL0 as seed ortholog is 100%.

Group of orthologs #1634. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:41

G3JS87              	100.00%		B5DZH7              	100.00%
Bootstrap support for G3JS87 as seed ortholog is 100%.
Bootstrap support for B5DZH7 as seed ortholog is 86%.

Group of orthologs #1635. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:107

G3J6V4              	100.00%		Q29LS7              	100.00%
Bootstrap support for G3J6V4 as seed ortholog is 100%.
Bootstrap support for Q29LS7 as seed ortholog is 100%.

Group of orthologs #1636. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:107

G3JUD0              	100.00%		B5E0G6              	100.00%
Bootstrap support for G3JUD0 as seed ortholog is 100%.
Bootstrap support for B5E0G6 as seed ortholog is 100%.

Group of orthologs #1637. Best score 107 bits
Score difference with first non-orthologous sequence - C.militaris:107 D.pseudoobscura:107

G3JPU4              	100.00%		Q293K8              	100.00%
Bootstrap support for G3JPU4 as seed ortholog is 100%.
Bootstrap support for Q293K8 as seed ortholog is 100%.

Group of orthologs #1638. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3J5J7              	100.00%		Q29BB2              	100.00%
                    	       		Q293A5              	38.89%
Bootstrap support for G3J5J7 as seed ortholog is 100%.
Bootstrap support for Q29BB2 as seed ortholog is 100%.

Group of orthologs #1639. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3J667              	100.00%		B5DYJ9              	100.00%
Bootstrap support for G3J667 as seed ortholog is 100%.
Bootstrap support for B5DYJ9 as seed ortholog is 100%.

Group of orthologs #1640. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3JG00              	100.00%		B5DXP7              	100.00%
Bootstrap support for G3JG00 as seed ortholog is 100%.
Bootstrap support for B5DXP7 as seed ortholog is 100%.

Group of orthologs #1641. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:27 D.pseudoobscura:42

G3J6A8              	100.00%		Q296L7              	100.00%
Bootstrap support for G3J6A8 as seed ortholog is 91%.
Bootstrap support for Q296L7 as seed ortholog is 90%.

Group of orthologs #1642. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3JCX9              	100.00%		Q292N9              	100.00%
Bootstrap support for G3JCX9 as seed ortholog is 100%.
Bootstrap support for Q292N9 as seed ortholog is 100%.

Group of orthologs #1643. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3JH81              	100.00%		Q28YX2              	100.00%
Bootstrap support for G3JH81 as seed ortholog is 100%.
Bootstrap support for Q28YX2 as seed ortholog is 100%.

Group of orthologs #1644. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3JAT8              	100.00%		Q29GW1              	100.00%
Bootstrap support for G3JAT8 as seed ortholog is 100%.
Bootstrap support for Q29GW1 as seed ortholog is 100%.

Group of orthologs #1645. Best score 106 bits
Score difference with first non-orthologous sequence - C.militaris:106 D.pseudoobscura:106

G3JCR9              	100.00%		Q29LJ2              	100.00%
Bootstrap support for G3JCR9 as seed ortholog is 100%.
Bootstrap support for Q29LJ2 as seed ortholog is 100%.

Group of orthologs #1646. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:13 D.pseudoobscura:105

G3JUD3              	100.00%		Q29AS8              	100.00%
G3JUL7              	12.19%		Q29BR1              	18.32%
G3JFC0              	10.10%		
G3JSM9              	9.90%		
G3JAT4              	8.85%		
G3JUK1              	7.50%		
G3JAJ4              	7.19%		
G3J4A4              	5.00%		
Bootstrap support for G3JUD3 as seed ortholog is 63%.
Alternative seed ortholog is G3J639 (13 bits away from this cluster)
Bootstrap support for Q29AS8 as seed ortholog is 100%.

Group of orthologs #1647. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 D.pseudoobscura:16

G3JE84              	100.00%		Q28XW2              	100.00%
                    	       		Q29CD7              	53.59%
                    	       		Q28XW1              	26.31%
                    	       		Q28XW4              	25.63%
                    	       		Q29H91              	8.35%
                    	       		B5DRB4              	5.73%
Bootstrap support for G3JE84 as seed ortholog is 100%.
Bootstrap support for Q28XW2 as seed ortholog is 64%.
Alternative seed ortholog is Q28XW3 (16 bits away from this cluster)

Group of orthologs #1648. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:37 D.pseudoobscura:20

G3JGI7              	100.00%		Q28Z81              	100.00%
                    	       		Q29K11              	5.15%
Bootstrap support for G3JGI7 as seed ortholog is 93%.
Bootstrap support for Q28Z81 as seed ortholog is 64%.
Alternative seed ortholog is Q29KV0 (20 bits away from this cluster)

Group of orthologs #1649. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 D.pseudoobscura:105

G3J3X0              	100.00%		Q29GS2              	100.00%
Bootstrap support for G3J3X0 as seed ortholog is 100%.
Bootstrap support for Q29GS2 as seed ortholog is 100%.

Group of orthologs #1650. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:105

G3JKV5              	100.00%		I7M5V3              	100.00%
Bootstrap support for G3JKV5 as seed ortholog is 91%.
Bootstrap support for I7M5V3 as seed ortholog is 100%.

Group of orthologs #1651. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 D.pseudoobscura:105

G3JJ87              	100.00%		Q297P7              	100.00%
Bootstrap support for G3JJ87 as seed ortholog is 100%.
Bootstrap support for Q297P7 as seed ortholog is 100%.

Group of orthologs #1652. Best score 105 bits
Score difference with first non-orthologous sequence - C.militaris:105 D.pseudoobscura:105

G3JSK6              	100.00%		Q29L80              	100.00%
Bootstrap support for G3JSK6 as seed ortholog is 100%.
Bootstrap support for Q29L80 as seed ortholog is 100%.

Group of orthologs #1653. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3J302              	100.00%		B5DWZ7              	100.00%
Bootstrap support for G3J302 as seed ortholog is 100%.
Bootstrap support for B5DWZ7 as seed ortholog is 100%.

Group of orthologs #1654. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3JHI1              	100.00%		B5DPE8              	100.00%
Bootstrap support for G3JHI1 as seed ortholog is 100%.
Bootstrap support for B5DPE8 as seed ortholog is 100%.

Group of orthologs #1655. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3JDU6              	100.00%		B5DXS8              	100.00%
Bootstrap support for G3JDU6 as seed ortholog is 100%.
Bootstrap support for B5DXS8 as seed ortholog is 100%.

Group of orthologs #1656. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3J6Z8              	100.00%		Q293N1              	100.00%
Bootstrap support for G3J6Z8 as seed ortholog is 100%.
Bootstrap support for Q293N1 as seed ortholog is 100%.

Group of orthologs #1657. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3JQ24              	100.00%		Q28ZY8              	100.00%
Bootstrap support for G3JQ24 as seed ortholog is 100%.
Bootstrap support for Q28ZY8 as seed ortholog is 100%.

Group of orthologs #1658. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3JSR4              	100.00%		Q28YM8              	100.00%
Bootstrap support for G3JSR4 as seed ortholog is 100%.
Bootstrap support for Q28YM8 as seed ortholog is 100%.

Group of orthologs #1659. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3JBK7              	100.00%		Q29L14              	100.00%
Bootstrap support for G3JBK7 as seed ortholog is 100%.
Bootstrap support for Q29L14 as seed ortholog is 100%.

Group of orthologs #1660. Best score 104 bits
Score difference with first non-orthologous sequence - C.militaris:104 D.pseudoobscura:104

G3J952              	100.00%		Q2LZD3              	100.00%
Bootstrap support for G3J952 as seed ortholog is 100%.
Bootstrap support for Q2LZD3 as seed ortholog is 100%.

Group of orthologs #1661. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3J3J2              	100.00%		Q29EH2              	100.00%
                    	       		B5DYQ5              	37.23%
                    	       		B5DYQ7              	36.75%
Bootstrap support for G3J3J2 as seed ortholog is 100%.
Bootstrap support for Q29EH2 as seed ortholog is 100%.

Group of orthologs #1662. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3J3Y5              	100.00%		Q29FY6              	100.00%
                    	       		Q291H0              	36.20%
Bootstrap support for G3J3Y5 as seed ortholog is 100%.
Bootstrap support for Q29FY6 as seed ortholog is 100%.

Group of orthologs #1663. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JIR4              	100.00%		Q291L3              	100.00%
G3JM18              	32.07%		
Bootstrap support for G3JIR4 as seed ortholog is 100%.
Bootstrap support for Q291L3 as seed ortholog is 100%.

Group of orthologs #1664. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:39

G3JBS6              	100.00%		Q290W1              	100.00%
Bootstrap support for G3JBS6 as seed ortholog is 100%.
Bootstrap support for Q290W1 as seed ortholog is 93%.

Group of orthologs #1665. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3J5L0              	100.00%		Q29BL9              	100.00%
Bootstrap support for G3J5L0 as seed ortholog is 100%.
Bootstrap support for Q29BL9 as seed ortholog is 100%.

Group of orthologs #1666. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JHU6              	100.00%		I5APU9              	100.00%
Bootstrap support for G3JHU6 as seed ortholog is 100%.
Bootstrap support for I5APU9 as seed ortholog is 100%.

Group of orthologs #1667. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:103

G3J736              	100.00%		Q29BK9              	100.00%
Bootstrap support for G3J736 as seed ortholog is 99%.
Bootstrap support for Q29BK9 as seed ortholog is 100%.

Group of orthologs #1668. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JH99              	100.00%		Q290S4              	100.00%
Bootstrap support for G3JH99 as seed ortholog is 100%.
Bootstrap support for Q290S4 as seed ortholog is 100%.

Group of orthologs #1669. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JD83              	100.00%		Q29CE7              	100.00%
Bootstrap support for G3JD83 as seed ortholog is 100%.
Bootstrap support for Q29CE7 as seed ortholog is 100%.

Group of orthologs #1670. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JJ68              	100.00%		Q29NI7              	100.00%
Bootstrap support for G3JJ68 as seed ortholog is 100%.
Bootstrap support for Q29NI7 as seed ortholog is 100%.

Group of orthologs #1671. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:16 D.pseudoobscura:103

G3JPI7              	100.00%		Q29HV7              	100.00%
Bootstrap support for G3JPI7 as seed ortholog is 87%.
Bootstrap support for Q29HV7 as seed ortholog is 100%.

Group of orthologs #1672. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JIP4              	100.00%		Q29P65              	100.00%
Bootstrap support for G3JIP4 as seed ortholog is 100%.
Bootstrap support for Q29P65 as seed ortholog is 100%.

Group of orthologs #1673. Best score 103 bits
Score difference with first non-orthologous sequence - C.militaris:103 D.pseudoobscura:103

G3JHB5              	100.00%		Q2LZM6              	100.00%
Bootstrap support for G3JHB5 as seed ortholog is 100%.
Bootstrap support for Q2LZM6 as seed ortholog is 100%.

Group of orthologs #1674. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:58 D.pseudoobscura:24

G3JFL3              	100.00%		B5DW59              	100.00%
G3J8J8              	5.94%		Q29AN3              	91.60%
                    	       		B5DW58              	88.59%
                    	       		B5DUY3              	79.77%
                    	       		B5DW57              	75.73%
                    	       		Q2LYX6              	37.34%
                    	       		Q29AM3              	34.23%
                    	       		Q291X7              	33.51%
                    	       		Q28WS0              	31.95%
                    	       		Q28XI1              	20.64%
                    	       		Q28YG9              	18.78%
                    	       		Q2LZS4              	6.74%
                    	       		Q2LZW4              	6.22%
Bootstrap support for G3JFL3 as seed ortholog is 91%.
Bootstrap support for B5DW59 as seed ortholog is 70%.
Alternative seed ortholog is Q298W4 (24 bits away from this cluster)

Group of orthologs #1675. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:22 D.pseudoobscura:102

G3JS35              	100.00%		B5DYD9              	100.00%
G3J530              	11.07%		Q29BK1              	46.61%
Bootstrap support for G3JS35 as seed ortholog is 71%.
Alternative seed ortholog is G3J9H0 (22 bits away from this cluster)
Bootstrap support for B5DYD9 as seed ortholog is 100%.

Group of orthologs #1676. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3JPI5              	100.00%		Q2M1C9              	100.00%
                    	       		B5DQM3              	6.78%
                    	       		Q28XZ4              	5.13%
Bootstrap support for G3JPI5 as seed ortholog is 100%.
Bootstrap support for Q2M1C9 as seed ortholog is 100%.

Group of orthologs #1677. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3JBV4              	100.00%		B5DVB2              	100.00%
                    	       		B5DVA9              	36.08%
Bootstrap support for G3JBV4 as seed ortholog is 100%.
Bootstrap support for B5DVB2 as seed ortholog is 100%.

Group of orthologs #1678. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3JMW5              	100.00%		Q29BT7              	100.00%
G3J3H4              	20.63%		
Bootstrap support for G3JMW5 as seed ortholog is 100%.
Bootstrap support for Q29BT7 as seed ortholog is 100%.

Group of orthologs #1679. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:31

G3J889              	100.00%		B5DKQ4              	100.00%
Bootstrap support for G3J889 as seed ortholog is 100%.
Bootstrap support for B5DKQ4 as seed ortholog is 98%.

Group of orthologs #1680. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:26

G3J7R6              	100.00%		Q29DQ4              	100.00%
Bootstrap support for G3J7R6 as seed ortholog is 100%.
Bootstrap support for Q29DQ4 as seed ortholog is 86%.

Group of orthologs #1681. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3JCT2              	100.00%		Q29FT9              	100.00%
Bootstrap support for G3JCT2 as seed ortholog is 100%.
Bootstrap support for Q29FT9 as seed ortholog is 100%.

Group of orthologs #1682. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3J7G4              	100.00%		Q29M53              	100.00%
Bootstrap support for G3J7G4 as seed ortholog is 100%.
Bootstrap support for Q29M53 as seed ortholog is 100%.

Group of orthologs #1683. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3JPL0              	100.00%		Q29GE4              	100.00%
Bootstrap support for G3JPL0 as seed ortholog is 100%.
Bootstrap support for Q29GE4 as seed ortholog is 100%.

Group of orthologs #1684. Best score 102 bits
Score difference with first non-orthologous sequence - C.militaris:102 D.pseudoobscura:102

G3JU77              	100.00%		Q2LYP9              	100.00%
Bootstrap support for G3JU77 as seed ortholog is 100%.
Bootstrap support for Q2LYP9 as seed ortholog is 100%.

Group of orthologs #1685. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J5P2              	100.00%		Q29KK3              	100.00%
                    	       		B5DUT4              	79.15%
                    	       		B5DUT2              	70.89%
                    	       		B5DUT3              	67.92%
                    	       		B5DLZ1              	61.77%
                    	       		B5DJS0              	38.96%
Bootstrap support for G3J5P2 as seed ortholog is 100%.
Bootstrap support for Q29KK3 as seed ortholog is 100%.

Group of orthologs #1686. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J512              	100.00%		Q29N34              	100.00%
                    	       		Q2LYX4              	5.47%
Bootstrap support for G3J512 as seed ortholog is 100%.
Bootstrap support for Q29N34 as seed ortholog is 100%.

Group of orthologs #1687. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J3M0              	100.00%		Q290J8              	100.00%
Bootstrap support for G3J3M0 as seed ortholog is 100%.
Bootstrap support for Q290J8 as seed ortholog is 100%.

Group of orthologs #1688. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3JHR2              	100.00%		B5DRD1              	100.00%
Bootstrap support for G3JHR2 as seed ortholog is 100%.
Bootstrap support for B5DRD1 as seed ortholog is 100%.

Group of orthologs #1689. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J910              	100.00%		Q28YR1              	100.00%
Bootstrap support for G3J910 as seed ortholog is 100%.
Bootstrap support for Q28YR1 as seed ortholog is 100%.

Group of orthologs #1690. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J893              	100.00%		Q293T0              	100.00%
Bootstrap support for G3J893 as seed ortholog is 100%.
Bootstrap support for Q293T0 as seed ortholog is 100%.

Group of orthologs #1691. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3JU05              	100.00%		B5DLE6              	100.00%
Bootstrap support for G3JU05 as seed ortholog is 100%.
Bootstrap support for B5DLE6 as seed ortholog is 100%.

Group of orthologs #1692. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J510              	100.00%		Q29JX5              	100.00%
Bootstrap support for G3J510 as seed ortholog is 100%.
Bootstrap support for Q29JX5 as seed ortholog is 100%.

Group of orthologs #1693. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:32

G3JQ75              	100.00%		Q28Z93              	100.00%
Bootstrap support for G3JQ75 as seed ortholog is 100%.
Bootstrap support for Q28Z93 as seed ortholog is 97%.

Group of orthologs #1694. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3J8F4              	100.00%		Q2LZX3              	100.00%
Bootstrap support for G3J8F4 as seed ortholog is 100%.
Bootstrap support for Q2LZX3 as seed ortholog is 100%.

Group of orthologs #1695. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3JIB4              	100.00%		Q29H80              	100.00%
Bootstrap support for G3JIB4 as seed ortholog is 100%.
Bootstrap support for Q29H80 as seed ortholog is 100%.

Group of orthologs #1696. Best score 101 bits
Score difference with first non-orthologous sequence - C.militaris:101 D.pseudoobscura:101

G3JQ17              	100.00%		Q29EN0              	100.00%
Bootstrap support for G3JQ17 as seed ortholog is 100%.
Bootstrap support for Q29EN0 as seed ortholog is 100%.

Group of orthologs #1697. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 D.pseudoobscura:100

G3JC19              	100.00%		Q292C3              	100.00%
Bootstrap support for G3JC19 as seed ortholog is 100%.
Bootstrap support for Q292C3 as seed ortholog is 100%.

Group of orthologs #1698. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 D.pseudoobscura:100

G3JBD3              	100.00%		Q29CK4              	100.00%
Bootstrap support for G3JBD3 as seed ortholog is 100%.
Bootstrap support for Q29CK4 as seed ortholog is 100%.

Group of orthologs #1699. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 D.pseudoobscura:100

G3J7N0              	100.00%		Q29KF5              	100.00%
Bootstrap support for G3J7N0 as seed ortholog is 100%.
Bootstrap support for Q29KF5 as seed ortholog is 100%.

Group of orthologs #1700. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 D.pseudoobscura:100

G3JHY5              	100.00%		Q29F87              	100.00%
Bootstrap support for G3JHY5 as seed ortholog is 100%.
Bootstrap support for Q29F87 as seed ortholog is 100%.

Group of orthologs #1701. Best score 100 bits
Score difference with first non-orthologous sequence - C.militaris:100 D.pseudoobscura:100

G3JKB2              	100.00%		Q29E58              	100.00%
Bootstrap support for G3JKB2 as seed ortholog is 100%.
Bootstrap support for Q29E58 as seed ortholog is 100%.

Group of orthologs #1702. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:24 D.pseudoobscura:21

G3JTT6              	100.00%		Q29AW2              	100.00%
G3JPD9              	32.04%		Q29AW5              	14.23%
                    	       		Q29IP5              	5.58%
Bootstrap support for G3JTT6 as seed ortholog is 80%.
Bootstrap support for Q29AW2 as seed ortholog is 76%.

Group of orthologs #1703. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 D.pseudoobscura:99

G3JPD4              	100.00%		B5DUP9              	100.00%
                    	       		B5DUQ1              	100.00%
                    	       		B5DVH7              	100.00%
Bootstrap support for G3JPD4 as seed ortholog is 100%.
Bootstrap support for B5DUP9 as seed ortholog is 100%.
Bootstrap support for B5DUQ1 as seed ortholog is 100%.
Bootstrap support for B5DVH7 as seed ortholog is 100%.

Group of orthologs #1704. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:8 D.pseudoobscura:99

G3JMJ1              	100.00%		B5DPL7              	100.00%
                    	       		Q2LZV3              	100.00%
Bootstrap support for G3JMJ1 as seed ortholog is 62%.
Alternative seed ortholog is G3J2V3 (8 bits away from this cluster)
Bootstrap support for B5DPL7 as seed ortholog is 100%.
Bootstrap support for Q2LZV3 as seed ortholog is 100%.

Group of orthologs #1705. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 D.pseudoobscura:99

G3JIE9              	100.00%		Q29HJ5              	100.00%
                    	       		B5DXF5              	36.05%
Bootstrap support for G3JIE9 as seed ortholog is 100%.
Bootstrap support for Q29HJ5 as seed ortholog is 100%.

Group of orthologs #1706. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 D.pseudoobscura:99

G3JAL0              	100.00%		I5AMN4              	100.00%
Bootstrap support for G3JAL0 as seed ortholog is 100%.
Bootstrap support for I5AMN4 as seed ortholog is 100%.

Group of orthologs #1707. Best score 99 bits
Score difference with first non-orthologous sequence - C.militaris:99 D.pseudoobscura:99

G3J7K7              	100.00%		Q298N3              	100.00%
Bootstrap support for G3J7K7 as seed ortholog is 100%.
Bootstrap support for Q298N3 as seed ortholog is 100%.

Group of orthologs #1708. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:45 D.pseudoobscura:98

G3JFJ9              	100.00%		Q295T6              	100.00%
                    	       		Q295T5              	55.52%
Bootstrap support for G3JFJ9 as seed ortholog is 87%.
Bootstrap support for Q295T6 as seed ortholog is 100%.

Group of orthologs #1709. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 D.pseudoobscura:98

G3JAS2              	100.00%		B5DLR0              	100.00%
Bootstrap support for G3JAS2 as seed ortholog is 100%.
Bootstrap support for B5DLR0 as seed ortholog is 100%.

Group of orthologs #1710. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 D.pseudoobscura:98

G3J508              	100.00%		Q28XK6              	100.00%
Bootstrap support for G3J508 as seed ortholog is 100%.
Bootstrap support for Q28XK6 as seed ortholog is 100%.

Group of orthologs #1711. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:18 D.pseudoobscura:21

G3JGC7              	100.00%		Q28YJ0              	100.00%
Bootstrap support for G3JGC7 as seed ortholog is 73%.
Alternative seed ortholog is G3J538 (18 bits away from this cluster)
Bootstrap support for Q28YJ0 as seed ortholog is 83%.

Group of orthologs #1712. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 D.pseudoobscura:98

G3JJQ7              	100.00%		Q29BZ5              	100.00%
Bootstrap support for G3JJQ7 as seed ortholog is 100%.
Bootstrap support for Q29BZ5 as seed ortholog is 100%.

Group of orthologs #1713. Best score 98 bits
Score difference with first non-orthologous sequence - C.militaris:98 D.pseudoobscura:98

G3JJ19              	100.00%		Q29F46              	100.00%
Bootstrap support for G3JJ19 as seed ortholog is 100%.
Bootstrap support for Q29F46 as seed ortholog is 100%.

Group of orthologs #1714. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3J713              	100.00%		Q29EI9              	100.00%
                    	       		Q29EJ0              	59.74%
Bootstrap support for G3J713 as seed ortholog is 100%.
Bootstrap support for Q29EI9 as seed ortholog is 100%.

Group of orthologs #1715. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JGK0              	100.00%		Q29G95              	100.00%
                    	       		B5DZ63              	38.84%
Bootstrap support for G3JGK0 as seed ortholog is 100%.
Bootstrap support for Q29G95 as seed ortholog is 100%.

Group of orthologs #1716. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JFT5              	100.00%		B5DN29              	100.00%
Bootstrap support for G3JFT5 as seed ortholog is 100%.
Bootstrap support for B5DN29 as seed ortholog is 100%.

Group of orthologs #1717. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3J3U4              	100.00%		Q290P9              	100.00%
Bootstrap support for G3J3U4 as seed ortholog is 100%.
Bootstrap support for Q290P9 as seed ortholog is 100%.

Group of orthologs #1718. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JJH1              	100.00%		B5DRG2              	100.00%
Bootstrap support for G3JJH1 as seed ortholog is 100%.
Bootstrap support for B5DRG2 as seed ortholog is 100%.

Group of orthologs #1719. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3J3W5              	100.00%		Q2M0A5              	100.00%
Bootstrap support for G3J3W5 as seed ortholog is 100%.
Bootstrap support for Q2M0A5 as seed ortholog is 100%.

Group of orthologs #1720. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JJ34              	100.00%		Q29AN6              	100.00%
Bootstrap support for G3JJ34 as seed ortholog is 100%.
Bootstrap support for Q29AN6 as seed ortholog is 100%.

Group of orthologs #1721. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JL90              	100.00%		Q298I8              	100.00%
Bootstrap support for G3JL90 as seed ortholog is 100%.
Bootstrap support for Q298I8 as seed ortholog is 100%.

Group of orthologs #1722. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JQN5              	100.00%		Q29M38              	100.00%
Bootstrap support for G3JQN5 as seed ortholog is 100%.
Bootstrap support for Q29M38 as seed ortholog is 100%.

Group of orthologs #1723. Best score 97 bits
Score difference with first non-orthologous sequence - C.militaris:97 D.pseudoobscura:97

G3JP83              	100.00%		Q2LZY1              	100.00%
Bootstrap support for G3JP83 as seed ortholog is 100%.
Bootstrap support for Q2LZY1 as seed ortholog is 100%.

Group of orthologs #1724. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:96

G3JAF0              	100.00%		Q29B08              	100.00%
G3JB60              	6.05%		
Bootstrap support for G3JAF0 as seed ortholog is 80%.
Bootstrap support for Q29B08 as seed ortholog is 100%.

Group of orthologs #1725. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:96

G3J7F6              	100.00%		B5DLB3              	100.00%
Bootstrap support for G3J7F6 as seed ortholog is 100%.
Bootstrap support for B5DLB3 as seed ortholog is 100%.

Group of orthologs #1726. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:96

G3JDE5              	100.00%		Q299F9              	100.00%
Bootstrap support for G3JDE5 as seed ortholog is 100%.
Bootstrap support for Q299F9 as seed ortholog is 100%.

Group of orthologs #1727. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:96

G3JP41              	100.00%		Q295N0              	100.00%
Bootstrap support for G3JP41 as seed ortholog is 100%.
Bootstrap support for Q295N0 as seed ortholog is 100%.

Group of orthologs #1728. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:96

G3JKM7              	100.00%		Q29EE9              	100.00%
Bootstrap support for G3JKM7 as seed ortholog is 100%.
Bootstrap support for Q29EE9 as seed ortholog is 100%.

Group of orthologs #1729. Best score 96 bits
Score difference with first non-orthologous sequence - C.militaris:96 D.pseudoobscura:96

G3JBQ7              	100.00%		Q2M1B7              	100.00%
Bootstrap support for G3JBQ7 as seed ortholog is 100%.
Bootstrap support for Q2M1B7 as seed ortholog is 100%.

Group of orthologs #1730. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 D.pseudoobscura:95

G3JM30              	100.00%		Q2M0C3              	100.00%
                    	       		Q298W9              	37.50%
Bootstrap support for G3JM30 as seed ortholog is 100%.
Bootstrap support for Q2M0C3 as seed ortholog is 100%.

Group of orthologs #1731. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 D.pseudoobscura:95

G3JBD5              	100.00%		B5DYK6              	100.00%
Bootstrap support for G3JBD5 as seed ortholog is 100%.
Bootstrap support for B5DYK6 as seed ortholog is 100%.

Group of orthologs #1732. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 D.pseudoobscura:95

G3JI83              	100.00%		Q29A33              	100.00%
Bootstrap support for G3JI83 as seed ortholog is 100%.
Bootstrap support for Q29A33 as seed ortholog is 100%.

Group of orthologs #1733. Best score 95 bits
Score difference with first non-orthologous sequence - C.militaris:95 D.pseudoobscura:95

G3JL42              	100.00%		Q29F77              	100.00%
Bootstrap support for G3JL42 as seed ortholog is 100%.
Bootstrap support for Q29F77 as seed ortholog is 100%.

Group of orthologs #1734. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 D.pseudoobscura:94

G3J9T0              	100.00%		B5DX88              	100.00%
Bootstrap support for G3J9T0 as seed ortholog is 100%.
Bootstrap support for B5DX88 as seed ortholog is 100%.

Group of orthologs #1735. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 D.pseudoobscura:12

G3JNR6              	100.00%		B5DKL7              	100.00%
Bootstrap support for G3JNR6 as seed ortholog is 100%.
Bootstrap support for B5DKL7 as seed ortholog is 68%.
Alternative seed ortholog is Q29J07 (12 bits away from this cluster)

Group of orthologs #1736. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 D.pseudoobscura:94

G3J868              	100.00%		Q294H5              	100.00%
Bootstrap support for G3J868 as seed ortholog is 100%.
Bootstrap support for Q294H5 as seed ortholog is 100%.

Group of orthologs #1737. Best score 94 bits
Score difference with first non-orthologous sequence - C.militaris:94 D.pseudoobscura:94

G3JD58              	100.00%		Q297I9              	100.00%
Bootstrap support for G3JD58 as seed ortholog is 100%.
Bootstrap support for Q297I9 as seed ortholog is 100%.

Group of orthologs #1738. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 D.pseudoobscura:93

G3JDE4              	100.00%		Q2LZF4              	100.00%
                    	       		B5DPX2              	55.40%
                    	       		B5DPX1              	38.97%
                    	       		Q2LZF5              	37.32%
                    	       		Q2LZF3              	30.28%
Bootstrap support for G3JDE4 as seed ortholog is 100%.
Bootstrap support for Q2LZF4 as seed ortholog is 100%.

Group of orthologs #1739. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 D.pseudoobscura:93

G3JBV5              	100.00%		Q29HM1              	100.00%
                    	       		B5DWD4              	64.21%
Bootstrap support for G3JBV5 as seed ortholog is 100%.
Bootstrap support for Q29HM1 as seed ortholog is 100%.

Group of orthologs #1740. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 D.pseudoobscura:93

G3J916              	100.00%		Q290B5              	100.00%
Bootstrap support for G3J916 as seed ortholog is 100%.
Bootstrap support for Q290B5 as seed ortholog is 100%.

Group of orthologs #1741. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 D.pseudoobscura:19

G3J438              	100.00%		Q29EF5              	100.00%
Bootstrap support for G3J438 as seed ortholog is 100%.
Bootstrap support for Q29EF5 as seed ortholog is 45%.
Alternative seed ortholog is Q29HG8 (19 bits away from this cluster)

Group of orthologs #1742. Best score 93 bits
Score difference with first non-orthologous sequence - C.militaris:93 D.pseudoobscura:93

G3JL29              	100.00%		Q29M37              	100.00%
Bootstrap support for G3JL29 as seed ortholog is 100%.
Bootstrap support for Q29M37 as seed ortholog is 100%.

Group of orthologs #1743. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:27 D.pseudoobscura:29

G3JST1              	100.00%		Q29MK2              	100.00%
G3JHM2              	21.89%		Q29MJ8              	19.03%
G3JPG0              	5.39%		
Bootstrap support for G3JST1 as seed ortholog is 81%.
Bootstrap support for Q29MK2 as seed ortholog is 68%.
Alternative seed ortholog is B5DW41 (29 bits away from this cluster)

Group of orthologs #1744. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JBP3              	100.00%		Q29AL1              	100.00%
G3JID4              	35.36%		
Bootstrap support for G3JBP3 as seed ortholog is 100%.
Bootstrap support for Q29AL1 as seed ortholog is 100%.

Group of orthologs #1745. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JD36              	100.00%		Q299B6              	100.00%
                    	       		B5DYM1              	23.77%
Bootstrap support for G3JD36 as seed ortholog is 100%.
Bootstrap support for Q299B6 as seed ortholog is 100%.

Group of orthologs #1746. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JJ13              	100.00%		Q296P2              	100.00%
                    	       		B5DMT4              	5.68%
Bootstrap support for G3JJ13 as seed ortholog is 100%.
Bootstrap support for Q296P2 as seed ortholog is 100%.

Group of orthologs #1747. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JPL9              	100.00%		Q290S3              	100.00%
                    	       		B5DZW9              	18.64%
Bootstrap support for G3JPL9 as seed ortholog is 100%.
Bootstrap support for Q290S3 as seed ortholog is 100%.

Group of orthologs #1748. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JIT3              	100.00%		Q29KU0              	100.00%
G3JTP6              	5.88%		
Bootstrap support for G3JIT3 as seed ortholog is 100%.
Bootstrap support for Q29KU0 as seed ortholog is 100%.

Group of orthologs #1749. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JUZ8              	100.00%		Q299Z3              	100.00%
                    	       		Q299Z4              	17.35%
Bootstrap support for G3JUZ8 as seed ortholog is 100%.
Bootstrap support for Q299Z3 as seed ortholog is 100%.

Group of orthologs #1750. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3J647              	100.00%		B5DIX0              	100.00%
Bootstrap support for G3J647 as seed ortholog is 100%.
Bootstrap support for B5DIX0 as seed ortholog is 100%.

Group of orthologs #1751. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3J4J8              	100.00%		Q28XT6              	100.00%
Bootstrap support for G3J4J8 as seed ortholog is 100%.
Bootstrap support for Q28XT6 as seed ortholog is 100%.

Group of orthologs #1752. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3J462              	100.00%		Q292B6              	100.00%
Bootstrap support for G3J462 as seed ortholog is 100%.
Bootstrap support for Q292B6 as seed ortholog is 100%.

Group of orthologs #1753. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JED5              	100.00%		Q290Q2              	100.00%
Bootstrap support for G3JED5 as seed ortholog is 100%.
Bootstrap support for Q290Q2 as seed ortholog is 100%.

Group of orthologs #1754. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JI32              	100.00%		Q290N2              	100.00%
Bootstrap support for G3JI32 as seed ortholog is 100%.
Bootstrap support for Q290N2 as seed ortholog is 100%.

Group of orthologs #1755. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JLE4              	100.00%		Q28Y46              	100.00%
Bootstrap support for G3JLE4 as seed ortholog is 100%.
Bootstrap support for Q28Y46 as seed ortholog is 100%.

Group of orthologs #1756. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JQM3              	100.00%		Q28XL0              	100.00%
Bootstrap support for G3JQM3 as seed ortholog is 100%.
Bootstrap support for Q28XL0 as seed ortholog is 100%.

Group of orthologs #1757. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JPK3              	100.00%		Q29DA3              	100.00%
Bootstrap support for G3JPK3 as seed ortholog is 100%.
Bootstrap support for Q29DA3 as seed ortholog is 100%.

Group of orthologs #1758. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JN55              	100.00%		Q8I1E5              	100.00%
Bootstrap support for G3JN55 as seed ortholog is 100%.
Bootstrap support for Q8I1E5 as seed ortholog is 100%.

Group of orthologs #1759. Best score 92 bits
Score difference with first non-orthologous sequence - C.militaris:92 D.pseudoobscura:92

G3JT19              	100.00%		Q2M0B7              	100.00%
Bootstrap support for G3JT19 as seed ortholog is 100%.
Bootstrap support for Q2M0B7 as seed ortholog is 100%.

Group of orthologs #1760. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3J2U5              	100.00%		Q2M071              	100.00%
G3JQV2              	34.07%		B5DI45              	48.41%
Bootstrap support for G3J2U5 as seed ortholog is 100%.
Bootstrap support for Q2M071 as seed ortholog is 100%.

Group of orthologs #1761. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:20

G3JN62              	100.00%		B5DNR0              	100.00%
                    	       		B5DPN3              	5.66%
Bootstrap support for G3JN62 as seed ortholog is 100%.
Bootstrap support for B5DNR0 as seed ortholog is 83%.

Group of orthologs #1762. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JL64              	100.00%		I5ANM7              	100.00%
G3J3F6              	36.19%		
Bootstrap support for G3JL64 as seed ortholog is 100%.
Bootstrap support for I5ANM7 as seed ortholog is 100%.

Group of orthologs #1763. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:22 D.pseudoobscura:91

G3JDY6              	100.00%		Q299M0              	100.00%
                    	       		B5DV57              	57.60%
Bootstrap support for G3JDY6 as seed ortholog is 63%.
Alternative seed ortholog is G3JBF6 (22 bits away from this cluster)
Bootstrap support for Q299M0 as seed ortholog is 100%.

Group of orthologs #1764. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JAX2              	100.00%		B5DLM3              	100.00%
Bootstrap support for G3JAX2 as seed ortholog is 100%.
Bootstrap support for B5DLM3 as seed ortholog is 100%.

Group of orthologs #1765. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JCP3              	100.00%		B5DPB0              	100.00%
Bootstrap support for G3JCP3 as seed ortholog is 100%.
Bootstrap support for B5DPB0 as seed ortholog is 100%.

Group of orthologs #1766. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JGJ0              	100.00%		B5DQK2              	100.00%
Bootstrap support for G3JGJ0 as seed ortholog is 100%.
Bootstrap support for B5DQK2 as seed ortholog is 100%.

Group of orthologs #1767. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3J532              	100.00%		Q293X1              	100.00%
Bootstrap support for G3J532 as seed ortholog is 100%.
Bootstrap support for Q293X1 as seed ortholog is 100%.

Group of orthologs #1768. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3J4J5              	100.00%		Q298K6              	100.00%
Bootstrap support for G3J4J5 as seed ortholog is 100%.
Bootstrap support for Q298K6 as seed ortholog is 100%.

Group of orthologs #1769. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JCZ3              	100.00%		Q28XH9              	100.00%
Bootstrap support for G3JCZ3 as seed ortholog is 100%.
Bootstrap support for Q28XH9 as seed ortholog is 100%.

Group of orthologs #1770. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JHZ7              	100.00%		Q28XW8              	100.00%
Bootstrap support for G3JHZ7 as seed ortholog is 100%.
Bootstrap support for Q28XW8 as seed ortholog is 100%.

Group of orthologs #1771. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3J9A0              	100.00%		Q29HY2              	100.00%
Bootstrap support for G3J9A0 as seed ortholog is 100%.
Bootstrap support for Q29HY2 as seed ortholog is 100%.

Group of orthologs #1772. Best score 91 bits
Score difference with first non-orthologous sequence - C.militaris:91 D.pseudoobscura:91

G3JNM8              	100.00%		Q2M024              	100.00%
Bootstrap support for G3JNM8 as seed ortholog is 100%.
Bootstrap support for Q2M024 as seed ortholog is 100%.

Group of orthologs #1773. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 D.pseudoobscura:90

G3JQY8              	100.00%		B5DH81              	100.00%
                    	       		Q294K5              	39.73%
Bootstrap support for G3JQY8 as seed ortholog is 100%.
Bootstrap support for B5DH81 as seed ortholog is 100%.

Group of orthologs #1774. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 D.pseudoobscura:90

G3J7W5              	100.00%		Q2LZ61              	100.00%
Bootstrap support for G3J7W5 as seed ortholog is 100%.
Bootstrap support for Q2LZ61 as seed ortholog is 100%.

Group of orthologs #1775. Best score 90 bits
Score difference with first non-orthologous sequence - C.militaris:90 D.pseudoobscura:90

G3JN32              	100.00%		Q29JW8              	100.00%
Bootstrap support for G3JN32 as seed ortholog is 100%.
Bootstrap support for Q29JW8 as seed ortholog is 100%.

Group of orthologs #1776. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JDV2              	100.00%		B5E059              	100.00%
G3JDV8              	28.46%		
Bootstrap support for G3JDV2 as seed ortholog is 100%.
Bootstrap support for B5E059 as seed ortholog is 100%.

Group of orthologs #1777. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JEI6              	100.00%		Q29E78              	100.00%
                    	       		Q29MQ2              	71.46%
Bootstrap support for G3JEI6 as seed ortholog is 100%.
Bootstrap support for Q29E78 as seed ortholog is 100%.

Group of orthologs #1778. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JFX7              	100.00%		Q29IW1              	100.00%
                    	       		B5DH31              	6.49%
Bootstrap support for G3JFX7 as seed ortholog is 100%.
Bootstrap support for Q29IW1 as seed ortholog is 100%.

Group of orthologs #1779. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JGG5              	100.00%		B5DM20              	100.00%
Bootstrap support for G3JGG5 as seed ortholog is 100%.
Bootstrap support for B5DM20 as seed ortholog is 100%.

Group of orthologs #1780. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JKW1              	100.00%		B5DR62              	100.00%
Bootstrap support for G3JKW1 as seed ortholog is 100%.
Bootstrap support for B5DR62 as seed ortholog is 100%.

Group of orthologs #1781. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JAN8              	100.00%		Q295G7              	100.00%
Bootstrap support for G3JAN8 as seed ortholog is 100%.
Bootstrap support for Q295G7 as seed ortholog is 100%.

Group of orthologs #1782. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3J9D2              	100.00%		Q29AM8              	100.00%
Bootstrap support for G3J9D2 as seed ortholog is 100%.
Bootstrap support for Q29AM8 as seed ortholog is 100%.

Group of orthologs #1783. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3J9D9              	100.00%		Q29CY6              	100.00%
Bootstrap support for G3J9D9 as seed ortholog is 100%.
Bootstrap support for Q29CY6 as seed ortholog is 100%.

Group of orthologs #1784. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:17 D.pseudoobscura:34

G3JM45              	100.00%		Q28ZP5              	100.00%
Bootstrap support for G3JM45 as seed ortholog is 74%.
Alternative seed ortholog is G3JU92 (17 bits away from this cluster)
Bootstrap support for Q28ZP5 as seed ortholog is 91%.

Group of orthologs #1785. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3J499              	100.00%		Q29MX0              	100.00%
Bootstrap support for G3J499 as seed ortholog is 100%.
Bootstrap support for Q29MX0 as seed ortholog is 100%.

Group of orthologs #1786. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:89

G3JID7              	100.00%		Q29B17              	100.00%
Bootstrap support for G3JID7 as seed ortholog is 100%.
Bootstrap support for Q29B17 as seed ortholog is 100%.

Group of orthologs #1787. Best score 89 bits
Score difference with first non-orthologous sequence - C.militaris:89 D.pseudoobscura:38

G3JDH4              	100.00%		Q29MF5              	100.00%
Bootstrap support for G3JDH4 as seed ortholog is 100%.
Bootstrap support for Q29MF5 as seed ortholog is 62%.
Alternative seed ortholog is Q29FF6 (38 bits away from this cluster)

Group of orthologs #1788. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:32 D.pseudoobscura:8

G3J8J0              	100.00%		Q295B9              	100.00%
G3JI25              	41.66%		
G3J8J4              	26.52%		
G3J7V6              	11.71%		
G3JRW6              	8.62%		
G3J8V5              	6.08%		
G3JQR3              	5.19%		
G3JPE9              	5.08%		
Bootstrap support for G3J8J0 as seed ortholog is 44%.
Alternative seed ortholog is G3JC53 (32 bits away from this cluster)
Bootstrap support for Q295B9 as seed ortholog is 54%.
Alternative seed ortholog is B5DNJ0 (8 bits away from this cluster)

Group of orthologs #1789. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:31

G3J343              	100.00%		I5APB1              	100.00%
                    	       		Q29MM7              	8.06%
Bootstrap support for G3J343 as seed ortholog is 100%.
Bootstrap support for I5APB1 as seed ortholog is 53%.
Alternative seed ortholog is B5DLC5 (31 bits away from this cluster)

Group of orthologs #1790. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:88

G3JLH0              	100.00%		Q29GB6              	100.00%
                    	       		B5DT70              	88.03%
Bootstrap support for G3JLH0 as seed ortholog is 100%.
Bootstrap support for Q29GB6 as seed ortholog is 100%.

Group of orthologs #1791. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:40

G3J787              	100.00%		B5DW06              	100.00%
Bootstrap support for G3J787 as seed ortholog is 100%.
Bootstrap support for B5DW06 as seed ortholog is 99%.

Group of orthologs #1792. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:88

G3JD98              	100.00%		B5DSA5              	100.00%
Bootstrap support for G3JD98 as seed ortholog is 100%.
Bootstrap support for B5DSA5 as seed ortholog is 100%.

Group of orthologs #1793. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:88

G3JNC6              	100.00%		B5DXD5              	100.00%
Bootstrap support for G3JNC6 as seed ortholog is 100%.
Bootstrap support for B5DXD5 as seed ortholog is 100%.

Group of orthologs #1794. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:88

G3JDS6              	100.00%		Q298J9              	100.00%
Bootstrap support for G3JDS6 as seed ortholog is 100%.
Bootstrap support for Q298J9 as seed ortholog is 100%.

Group of orthologs #1795. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:88

G3JK91              	100.00%		Q292J2              	100.00%
Bootstrap support for G3JK91 as seed ortholog is 100%.
Bootstrap support for Q292J2 as seed ortholog is 100%.

Group of orthologs #1796. Best score 88 bits
Score difference with first non-orthologous sequence - C.militaris:88 D.pseudoobscura:88

G3JDP8              	100.00%		Q2M0P4              	100.00%
Bootstrap support for G3JDP8 as seed ortholog is 100%.
Bootstrap support for Q2M0P4 as seed ortholog is 100%.

Group of orthologs #1797. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JAD7              	100.00%		B5DI33              	100.00%
                    	       		B5DIB2              	72.31%
                    	       		Q29HZ1              	63.72%
                    	       		B5DYK2              	50.00%
                    	       		B5DMC2              	48.72%
Bootstrap support for G3JAD7 as seed ortholog is 100%.
Bootstrap support for B5DI33 as seed ortholog is 100%.

Group of orthologs #1798. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JUG1              	100.00%		Q291W1              	100.00%
                    	       		Q291W0              	49.49%
                    	       		Q29MP7              	31.33%
                    	       		B5DJ68              	19.29%
Bootstrap support for G3JUG1 as seed ortholog is 100%.
Bootstrap support for Q291W1 as seed ortholog is 100%.

Group of orthologs #1799. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JRJ0              	100.00%		Q28XJ4              	100.00%
G3J6N8              	6.88%		
Bootstrap support for G3JRJ0 as seed ortholog is 100%.
Bootstrap support for Q28XJ4 as seed ortholog is 100%.

Group of orthologs #1800. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JDY8              	100.00%		B5DVV7              	100.00%
Bootstrap support for G3JDY8 as seed ortholog is 100%.
Bootstrap support for B5DVV7 as seed ortholog is 100%.

Group of orthologs #1801. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JMH3              	100.00%		B5DS37              	100.00%
Bootstrap support for G3JMH3 as seed ortholog is 100%.
Bootstrap support for B5DS37 as seed ortholog is 100%.

Group of orthologs #1802. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3J2S8              	100.00%		Q29FJ1              	100.00%
Bootstrap support for G3J2S8 as seed ortholog is 100%.
Bootstrap support for Q29FJ1 as seed ortholog is 100%.

Group of orthologs #1803. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JDZ0              	100.00%		Q29BK6              	100.00%
Bootstrap support for G3JDZ0 as seed ortholog is 100%.
Bootstrap support for Q29BK6 as seed ortholog is 100%.

Group of orthologs #1804. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:46

G3JBM5              	100.00%		Q29ID4              	100.00%
Bootstrap support for G3JBM5 as seed ortholog is 100%.
Bootstrap support for Q29ID4 as seed ortholog is 99%.

Group of orthologs #1805. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3J6S5              	100.00%		Q2LYM7              	100.00%
Bootstrap support for G3J6S5 as seed ortholog is 100%.
Bootstrap support for Q2LYM7 as seed ortholog is 100%.

Group of orthologs #1806. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3J7P5              	100.00%		Q2M1C1              	100.00%
Bootstrap support for G3J7P5 as seed ortholog is 100%.
Bootstrap support for Q2M1C1 as seed ortholog is 100%.

Group of orthologs #1807. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JH51              	100.00%		Q29MS8              	100.00%
Bootstrap support for G3JH51 as seed ortholog is 100%.
Bootstrap support for Q29MS8 as seed ortholog is 100%.

Group of orthologs #1808. Best score 87 bits
Score difference with first non-orthologous sequence - C.militaris:87 D.pseudoobscura:87

G3JRH1              	100.00%		Q29KT3              	100.00%
Bootstrap support for G3JRH1 as seed ortholog is 100%.
Bootstrap support for Q29KT3 as seed ortholog is 100%.

Group of orthologs #1809. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3J9W4              	100.00%		Q28X08              	100.00%
Bootstrap support for G3J9W4 as seed ortholog is 100%.
Bootstrap support for Q28X08 as seed ortholog is 100%.

Group of orthologs #1810. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JFA1              	100.00%		Q28XJ9              	100.00%
Bootstrap support for G3JFA1 as seed ortholog is 100%.
Bootstrap support for Q28XJ9 as seed ortholog is 100%.

Group of orthologs #1811. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JE74              	100.00%		Q296Z3              	100.00%
Bootstrap support for G3JE74 as seed ortholog is 100%.
Bootstrap support for Q296Z3 as seed ortholog is 100%.

Group of orthologs #1812. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JSM6              	100.00%		B5DVX8              	100.00%
Bootstrap support for G3JSM6 as seed ortholog is 100%.
Bootstrap support for B5DVX8 as seed ortholog is 100%.

Group of orthologs #1813. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3J444              	100.00%		Q29JM4              	100.00%
Bootstrap support for G3J444 as seed ortholog is 100%.
Bootstrap support for Q29JM4 as seed ortholog is 100%.

Group of orthologs #1814. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JHF0              	100.00%		Q295A3              	100.00%
Bootstrap support for G3JHF0 as seed ortholog is 100%.
Bootstrap support for Q295A3 as seed ortholog is 100%.

Group of orthologs #1815. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JKW8              	100.00%		Q291E5              	100.00%
Bootstrap support for G3JKW8 as seed ortholog is 100%.
Bootstrap support for Q291E5 as seed ortholog is 100%.

Group of orthologs #1816. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JLA9              	100.00%		Q293R4              	100.00%
Bootstrap support for G3JLA9 as seed ortholog is 100%.
Bootstrap support for Q293R4 as seed ortholog is 100%.

Group of orthologs #1817. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3J865              	100.00%		Q29KT4              	100.00%
Bootstrap support for G3J865 as seed ortholog is 100%.
Bootstrap support for Q29KT4 as seed ortholog is 100%.

Group of orthologs #1818. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JR10              	100.00%		Q290Y9              	100.00%
Bootstrap support for G3JR10 as seed ortholog is 100%.
Bootstrap support for Q290Y9 as seed ortholog is 100%.

Group of orthologs #1819. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JRE9              	100.00%		Q295B5              	100.00%
Bootstrap support for G3JRE9 as seed ortholog is 100%.
Bootstrap support for Q295B5 as seed ortholog is 100%.

Group of orthologs #1820. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JAW4              	100.00%		Q2M1A4              	100.00%
Bootstrap support for G3JAW4 as seed ortholog is 100%.
Bootstrap support for Q2M1A4 as seed ortholog is 100%.

Group of orthologs #1821. Best score 86 bits
Score difference with first non-orthologous sequence - C.militaris:86 D.pseudoobscura:86

G3JJ65              	100.00%		Q2LZA9              	100.00%
Bootstrap support for G3JJ65 as seed ortholog is 100%.
Bootstrap support for Q2LZA9 as seed ortholog is 100%.

Group of orthologs #1822. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JHR3              	100.00%		B5DWP1              	100.00%
                    	       		Q29F69              	35.18%
Bootstrap support for G3JHR3 as seed ortholog is 100%.
Bootstrap support for B5DWP1 as seed ortholog is 100%.

Group of orthologs #1823. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JL15              	100.00%		Q28XZ1              	100.00%
                    	       		Q28YA2              	6.27%
Bootstrap support for G3JL15 as seed ortholog is 100%.
Bootstrap support for Q28XZ1 as seed ortholog is 100%.

Group of orthologs #1824. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3J7T6              	100.00%		Q29CE8              	100.00%
Bootstrap support for G3J7T6 as seed ortholog is 100%.
Bootstrap support for Q29CE8 as seed ortholog is 100%.

Group of orthologs #1825. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JE11              	100.00%		Q29D58              	100.00%
Bootstrap support for G3JE11 as seed ortholog is 100%.
Bootstrap support for Q29D58 as seed ortholog is 100%.

Group of orthologs #1826. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JLI8              	100.00%		Q296F1              	100.00%
Bootstrap support for G3JLI8 as seed ortholog is 100%.
Bootstrap support for Q296F1 as seed ortholog is 100%.

Group of orthologs #1827. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JDC4              	100.00%		Q2M0W4              	100.00%
Bootstrap support for G3JDC4 as seed ortholog is 100%.
Bootstrap support for Q2M0W4 as seed ortholog is 100%.

Group of orthologs #1828. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JNS7              	100.00%		Q29HQ5              	100.00%
Bootstrap support for G3JNS7 as seed ortholog is 100%.
Bootstrap support for Q29HQ5 as seed ortholog is 100%.

Group of orthologs #1829. Best score 85 bits
Score difference with first non-orthologous sequence - C.militaris:85 D.pseudoobscura:85

G3JK63              	100.00%		Q29LQ1              	100.00%
Bootstrap support for G3JK63 as seed ortholog is 100%.
Bootstrap support for Q29LQ1 as seed ortholog is 100%.

Group of orthologs #1830. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:18 D.pseudoobscura:84

G3JB57              	100.00%		Q2LYJ7              	100.00%
G3JQI2              	100.00%		Q29HX8              	100.00%
G3JNU1              	53.13%		Q2LZ14              	28.23%
G3JTT8              	49.79%		Q2M0P8              	27.40%
G3JSV1              	36.50%		Q2M1B3              	27.24%
G3JC39              	36.25%		
G3JRL9              	31.76%		
G3JF77              	29.16%		
G3JSF1              	28.06%		
G3JNI4              	26.35%		
G3J9C3              	25.15%		
G3JL74              	24.05%		
G3JT43              	22.85%		
G3JLB7              	21.44%		
G3JPI9              	19.94%		
G3JKR8              	19.64%		
G3J5S4              	18.14%		
G3JFI6              	10.42%		
Bootstrap support for G3JB57 as seed ortholog is 64%.
Alternative seed ortholog is G3JLW2 (18 bits away from this cluster)
Bootstrap support for G3JQI2 as seed ortholog is 73%.
Alternative seed ortholog is G3JLW2 (18 bits away from this cluster)
Bootstrap support for Q2LYJ7 as seed ortholog is 100%.
Bootstrap support for Q29HX8 as seed ortholog is 100%.

Group of orthologs #1831. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:21 D.pseudoobscura:84

G3J8F8              	100.00%		Q29JJ1              	100.00%
                    	       		Q29CC9              	16.58%
                    	       		Q298G5              	5.18%
Bootstrap support for G3J8F8 as seed ortholog is 82%.
Bootstrap support for Q29JJ1 as seed ortholog is 100%.

Group of orthologs #1832. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:84

G3J2Z3              	100.00%		Q293X0              	100.00%
Bootstrap support for G3J2Z3 as seed ortholog is 100%.
Bootstrap support for Q293X0 as seed ortholog is 100%.

Group of orthologs #1833. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:84

G3JL88              	100.00%		I5AP82              	100.00%
Bootstrap support for G3JL88 as seed ortholog is 100%.
Bootstrap support for I5AP82 as seed ortholog is 100%.

Group of orthologs #1834. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:84

G3JN45              	100.00%		Q298V0              	100.00%
Bootstrap support for G3JN45 as seed ortholog is 100%.
Bootstrap support for Q298V0 as seed ortholog is 100%.

Group of orthologs #1835. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:84

G3JV10              	100.00%		Q29GN7              	100.00%
Bootstrap support for G3JV10 as seed ortholog is 100%.
Bootstrap support for Q29GN7 as seed ortholog is 100%.

Group of orthologs #1836. Best score 84 bits
Score difference with first non-orthologous sequence - C.militaris:84 D.pseudoobscura:12

G3JRC1              	100.00%		Q29PN2              	100.00%
Bootstrap support for G3JRC1 as seed ortholog is 100%.
Bootstrap support for Q29PN2 as seed ortholog is 68%.
Alternative seed ortholog is Q293F1 (12 bits away from this cluster)

Group of orthologs #1837. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 D.pseudoobscura:83

G3J8Z4              	100.00%		Q29MM1              	100.00%
                    	       		Q29MM0              	20.36%
                    	       		Q29ML9              	11.86%
Bootstrap support for G3J8Z4 as seed ortholog is 100%.
Bootstrap support for Q29MM1 as seed ortholog is 100%.

Group of orthologs #1838. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 D.pseudoobscura:83

G3J780              	100.00%		B5DK84              	100.00%
Bootstrap support for G3J780 as seed ortholog is 100%.
Bootstrap support for B5DK84 as seed ortholog is 100%.

Group of orthologs #1839. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 D.pseudoobscura:83

G3J2N4              	100.00%		Q29GX6              	100.00%
Bootstrap support for G3J2N4 as seed ortholog is 100%.
Bootstrap support for Q29GX6 as seed ortholog is 100%.

Group of orthologs #1840. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:2 D.pseudoobscura:20

G3JKD2              	100.00%		Q293K7              	100.00%
Bootstrap support for G3JKD2 as seed ortholog is 73%.
Alternative seed ortholog is G3JRE7 (2 bits away from this cluster)
Bootstrap support for Q293K7 as seed ortholog is 76%.

Group of orthologs #1841. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 D.pseudoobscura:83

G3J9E4              	100.00%		Q29L31              	100.00%
Bootstrap support for G3J9E4 as seed ortholog is 100%.
Bootstrap support for Q29L31 as seed ortholog is 100%.

Group of orthologs #1842. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 D.pseudoobscura:83

G3J953              	100.00%		Q29MR4              	100.00%
Bootstrap support for G3J953 as seed ortholog is 100%.
Bootstrap support for Q29MR4 as seed ortholog is 100%.

Group of orthologs #1843. Best score 83 bits
Score difference with first non-orthologous sequence - C.militaris:83 D.pseudoobscura:83

G3JV24              	100.00%		Q2M174              	100.00%
Bootstrap support for G3JV24 as seed ortholog is 100%.
Bootstrap support for Q2M174 as seed ortholog is 100%.

Group of orthologs #1844. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:13

G3JRW2              	100.00%		Q293M5              	100.00%
G3JGT2              	13.57%		B5DXI6              	44.74%
G3JIU0              	12.88%		Q293M4              	38.54%
G3JPB8              	10.62%		Q293M3              	36.94%
G3JT50              	10.62%		Q29AI9              	36.54%
G3JF82              	8.06%		B5DXI5              	35.34%
G3J828              	5.80%		Q29AI7              	31.43%
G3JI24              	5.80%		Q29AI8              	30.73%
                    	       		Q29E59              	18.42%
                    	       		Q2LZD0              	17.62%
                    	       		Q29E63              	16.92%
                    	       		Q299K7              	8.81%
Bootstrap support for G3JRW2 as seed ortholog is 100%.
Bootstrap support for Q293M5 as seed ortholog is 82%.

Group of orthologs #1845. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:8

G3JAG7              	100.00%		Q29HM5              	100.00%
                    	       		Q29CB3              	20.99%
Bootstrap support for G3JAG7 as seed ortholog is 100%.
Bootstrap support for Q29HM5 as seed ortholog is 85%.

Group of orthologs #1846. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:82

G3JT28              	100.00%		Q2M0E0              	100.00%
                    	       		Q28XR2              	52.03%
Bootstrap support for G3JT28 as seed ortholog is 100%.
Bootstrap support for Q2M0E0 as seed ortholog is 100%.

Group of orthologs #1847. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:82

G3J6I8              	100.00%		Q28ZF9              	100.00%
Bootstrap support for G3J6I8 as seed ortholog is 100%.
Bootstrap support for Q28ZF9 as seed ortholog is 100%.

Group of orthologs #1848. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:82

G3JB37              	100.00%		Q28ZZ5              	100.00%
Bootstrap support for G3JB37 as seed ortholog is 100%.
Bootstrap support for Q28ZZ5 as seed ortholog is 100%.

Group of orthologs #1849. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:82

G3JBD4              	100.00%		Q28ZU9              	100.00%
Bootstrap support for G3JBD4 as seed ortholog is 100%.
Bootstrap support for Q28ZU9 as seed ortholog is 100%.

Group of orthologs #1850. Best score 82 bits
Score difference with first non-orthologous sequence - C.militaris:82 D.pseudoobscura:82

G3JSC0              	100.00%		Q29PD9              	100.00%
Bootstrap support for G3JSC0 as seed ortholog is 100%.
Bootstrap support for Q29PD9 as seed ortholog is 100%.

Group of orthologs #1851. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3J3Y6              	100.00%		B5DXA7              	100.00%
                    	       		Q29IW0              	70.37%
Bootstrap support for G3J3Y6 as seed ortholog is 100%.
Bootstrap support for B5DXA7 as seed ortholog is 100%.

Group of orthologs #1852. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3JK07              	100.00%		B5DZ62              	100.00%
                    	       		Q28YB2              	50.92%
Bootstrap support for G3JK07 as seed ortholog is 100%.
Bootstrap support for B5DZ62 as seed ortholog is 100%.

Group of orthologs #1853. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3J4Y5              	100.00%		Q294R0              	100.00%
Bootstrap support for G3J4Y5 as seed ortholog is 100%.
Bootstrap support for Q294R0 as seed ortholog is 100%.

Group of orthologs #1854. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:13 D.pseudoobscura:25

G3JDA7              	100.00%		Q291D2              	100.00%
Bootstrap support for G3JDA7 as seed ortholog is 93%.
Bootstrap support for Q291D2 as seed ortholog is 79%.

Group of orthologs #1855. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3JGG3              	100.00%		Q295B6              	100.00%
Bootstrap support for G3JGG3 as seed ortholog is 100%.
Bootstrap support for Q295B6 as seed ortholog is 100%.

Group of orthologs #1856. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3J9Z8              	100.00%		Q29DW6              	100.00%
Bootstrap support for G3J9Z8 as seed ortholog is 100%.
Bootstrap support for Q29DW6 as seed ortholog is 100%.

Group of orthologs #1857. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3JQD1              	100.00%		Q292M1              	100.00%
Bootstrap support for G3JQD1 as seed ortholog is 100%.
Bootstrap support for Q292M1 as seed ortholog is 100%.

Group of orthologs #1858. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3JTM4              	100.00%		Q29EX9              	100.00%
Bootstrap support for G3JTM4 as seed ortholog is 100%.
Bootstrap support for Q29EX9 as seed ortholog is 100%.

Group of orthologs #1859. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3JRD9              	100.00%		Q2LZL9              	100.00%
Bootstrap support for G3JRD9 as seed ortholog is 100%.
Bootstrap support for Q2LZL9 as seed ortholog is 100%.

Group of orthologs #1860. Best score 81 bits
Score difference with first non-orthologous sequence - C.militaris:81 D.pseudoobscura:81

G3JUC5              	100.00%		Q29MT4              	100.00%
Bootstrap support for G3JUC5 as seed ortholog is 100%.
Bootstrap support for Q29MT4 as seed ortholog is 100%.

Group of orthologs #1861. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 D.pseudoobscura:80

G3J7X6              	100.00%		Q29PP4              	100.00%
                    	       		I5APQ5              	7.52%
                    	       		B5DI02              	6.97%
                    	       		B5DN40              	5.88%
                    	       		Q29P76              	5.76%
                    	       		Q2M0N9              	5.33%
Bootstrap support for G3J7X6 as seed ortholog is 100%.
Bootstrap support for Q29PP4 as seed ortholog is 100%.

Group of orthologs #1862. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 D.pseudoobscura:80

G3J3F9              	100.00%		Q2LZ31              	100.00%
Bootstrap support for G3J3F9 as seed ortholog is 100%.
Bootstrap support for Q2LZ31 as seed ortholog is 100%.

Group of orthologs #1863. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 D.pseudoobscura:80

G3JH71              	100.00%		Q29E85              	100.00%
Bootstrap support for G3JH71 as seed ortholog is 100%.
Bootstrap support for Q29E85 as seed ortholog is 100%.

Group of orthologs #1864. Best score 80 bits
Score difference with first non-orthologous sequence - C.militaris:80 D.pseudoobscura:80

G3JAU1              	100.00%		Q29LB4              	100.00%
Bootstrap support for G3JAU1 as seed ortholog is 100%.
Bootstrap support for Q29LB4 as seed ortholog is 100%.

Group of orthologs #1865. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:33

G3JU18              	100.00%		Q290L8              	100.00%
G3J6G2              	31.44%		Q29DN3              	26.97%
G3J367              	10.02%		Q2M044              	25.05%
                    	       		Q298Q0              	24.86%
                    	       		Q298Q1              	22.74%
                    	       		Q29DN4              	21.39%
                    	       		Q294V9              	16.18%
                    	       		Q28XU8              	14.93%
                    	       		Q29LW6              	14.84%
                    	       		Q28YE2              	12.91%
                    	       		Q298P8              	9.92%
                    	       		B5DW31              	8.86%
                    	       		B5DW30              	8.09%
Bootstrap support for G3JU18 as seed ortholog is 100%.
Bootstrap support for Q290L8 as seed ortholog is 72%.
Alternative seed ortholog is Q290B2 (33 bits away from this cluster)

Group of orthologs #1866. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3J3F8              	100.00%		Q29F26              	100.00%
                    	       		Q28ZG6              	27.45%
                    	       		B5E1E9              	22.06%
                    	       		Q29F28              	21.73%
                    	       		Q29F29              	18.95%
Bootstrap support for G3J3F8 as seed ortholog is 100%.
Bootstrap support for Q29F26 as seed ortholog is 100%.

Group of orthologs #1867. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3J349              	100.00%		Q29EH4              	100.00%
                    	       		B5DVU8              	17.54%
Bootstrap support for G3J349 as seed ortholog is 100%.
Bootstrap support for Q29EH4 as seed ortholog is 100%.

Group of orthologs #1868. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3JIW2              	100.00%		Q29GD4              	100.00%
G3J9S7              	43.23%		
Bootstrap support for G3JIW2 as seed ortholog is 100%.
Bootstrap support for Q29GD4 as seed ortholog is 100%.

Group of orthologs #1869. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3JM59              	100.00%		Q29FK8              	100.00%
                    	       		Q29FZ9              	23.35%
Bootstrap support for G3JM59 as seed ortholog is 100%.
Bootstrap support for Q29FK8 as seed ortholog is 100%.

Group of orthologs #1870. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3J3V2              	100.00%		B5DY58              	100.00%
Bootstrap support for G3J3V2 as seed ortholog is 100%.
Bootstrap support for B5DY58 as seed ortholog is 100%.

Group of orthologs #1871. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3J4Q3              	100.00%		Q299H9              	100.00%
Bootstrap support for G3J4Q3 as seed ortholog is 100%.
Bootstrap support for Q299H9 as seed ortholog is 100%.

Group of orthologs #1872. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3J307              	100.00%		Q29HF1              	100.00%
Bootstrap support for G3J307 as seed ortholog is 100%.
Bootstrap support for Q29HF1 as seed ortholog is 100%.

Group of orthologs #1873. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3JP97              	100.00%		B5DXG8              	100.00%
Bootstrap support for G3JP97 as seed ortholog is 100%.
Bootstrap support for B5DXG8 as seed ortholog is 100%.

Group of orthologs #1874. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3JJ75              	100.00%		Q29AM1              	100.00%
Bootstrap support for G3JJ75 as seed ortholog is 100%.
Bootstrap support for Q29AM1 as seed ortholog is 100%.

Group of orthologs #1875. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3JTQ2              	100.00%		Q291M0              	100.00%
Bootstrap support for G3JTQ2 as seed ortholog is 100%.
Bootstrap support for Q291M0 as seed ortholog is 100%.

Group of orthologs #1876. Best score 79 bits
Score difference with first non-orthologous sequence - C.militaris:79 D.pseudoobscura:79

G3JRL1              	100.00%		Q2LYX7              	100.00%
Bootstrap support for G3JRL1 as seed ortholog is 100%.
Bootstrap support for Q2LYX7 as seed ortholog is 100%.

Group of orthologs #1877. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3J6P7              	100.00%		Q29J34              	100.00%
                    	       		Q29NA8              	18.35%
                    	       		Q2M168              	15.36%
                    	       		Q29J35              	5.24%
Bootstrap support for G3J6P7 as seed ortholog is 100%.
Bootstrap support for Q29J34 as seed ortholog is 100%.

Group of orthologs #1878. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3J3S7              	100.00%		Q293D4              	100.00%
Bootstrap support for G3J3S7 as seed ortholog is 100%.
Bootstrap support for Q293D4 as seed ortholog is 100%.

Group of orthologs #1879. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3JHS3              	100.00%		I5API5              	100.00%
Bootstrap support for G3JHS3 as seed ortholog is 100%.
Bootstrap support for I5API5 as seed ortholog is 100%.

Group of orthologs #1880. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3JJ98              	100.00%		Q28WQ8              	100.00%
Bootstrap support for G3JJ98 as seed ortholog is 100%.
Bootstrap support for Q28WQ8 as seed ortholog is 100%.

Group of orthologs #1881. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3J8N7              	100.00%		Q29EF6              	100.00%
Bootstrap support for G3J8N7 as seed ortholog is 100%.
Bootstrap support for Q29EF6 as seed ortholog is 100%.

Group of orthologs #1882. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3J6C2              	100.00%		Q29PJ7              	100.00%
Bootstrap support for G3J6C2 as seed ortholog is 100%.
Bootstrap support for Q29PJ7 as seed ortholog is 100%.

Group of orthologs #1883. Best score 78 bits
Score difference with first non-orthologous sequence - C.militaris:78 D.pseudoobscura:78

G3JQT3              	100.00%		Q299G8              	100.00%
Bootstrap support for G3JQT3 as seed ortholog is 100%.
Bootstrap support for Q299G8 as seed ortholog is 100%.

Group of orthologs #1884. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:77

G3JCW7              	100.00%		Q28ZB3              	100.00%
Bootstrap support for G3JCW7 as seed ortholog is 100%.
Bootstrap support for Q28ZB3 as seed ortholog is 100%.

Group of orthologs #1885. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:77

G3J8Y6              	100.00%		Q297L3              	100.00%
Bootstrap support for G3J8Y6 as seed ortholog is 100%.
Bootstrap support for Q297L3 as seed ortholog is 100%.

Group of orthologs #1886. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:27 D.pseudoobscura:77

G3JHD0              	100.00%		Q28XH6              	100.00%
Bootstrap support for G3JHD0 as seed ortholog is 61%.
Alternative seed ortholog is G3JF81 (27 bits away from this cluster)
Bootstrap support for Q28XH6 as seed ortholog is 100%.

Group of orthologs #1887. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:77

G3JGJ6              	100.00%		Q291R9              	100.00%
Bootstrap support for G3JGJ6 as seed ortholog is 100%.
Bootstrap support for Q291R9 as seed ortholog is 100%.

Group of orthologs #1888. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:77

G3J3V7              	100.00%		Q29JI5              	100.00%
Bootstrap support for G3J3V7 as seed ortholog is 100%.
Bootstrap support for Q29JI5 as seed ortholog is 100%.

Group of orthologs #1889. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:77

G3J4I3              	100.00%		Q29NK5              	100.00%
Bootstrap support for G3J4I3 as seed ortholog is 100%.
Bootstrap support for Q29NK5 as seed ortholog is 100%.

Group of orthologs #1890. Best score 77 bits
Score difference with first non-orthologous sequence - C.militaris:77 D.pseudoobscura:77

G3JHP3              	100.00%		Q29N56              	100.00%
Bootstrap support for G3JHP3 as seed ortholog is 100%.
Bootstrap support for Q29N56 as seed ortholog is 100%.

Group of orthologs #1891. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:76

G3JGL0              	100.00%		Q294U0              	100.00%
                    	       		B5DUI5              	98.56%
Bootstrap support for G3JGL0 as seed ortholog is 100%.
Bootstrap support for Q294U0 as seed ortholog is 100%.

Group of orthologs #1892. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:27

G3J775              	100.00%		Q29HY5              	100.00%
Bootstrap support for G3J775 as seed ortholog is 100%.
Bootstrap support for Q29HY5 as seed ortholog is 98%.

Group of orthologs #1893. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:76

G3JEV0              	100.00%		Q29FS8              	100.00%
Bootstrap support for G3JEV0 as seed ortholog is 100%.
Bootstrap support for Q29FS8 as seed ortholog is 100%.

Group of orthologs #1894. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:76

G3JMB6              	100.00%		Q29FK6              	100.00%
Bootstrap support for G3JMB6 as seed ortholog is 100%.
Bootstrap support for Q29FK6 as seed ortholog is 100%.

Group of orthologs #1895. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:76

G3JFU4              	100.00%		Q29P25              	100.00%
Bootstrap support for G3JFU4 as seed ortholog is 100%.
Bootstrap support for Q29P25 as seed ortholog is 100%.

Group of orthologs #1896. Best score 76 bits
Score difference with first non-orthologous sequence - C.militaris:76 D.pseudoobscura:76

G3JN34              	100.00%		Q29KQ4              	100.00%
Bootstrap support for G3JN34 as seed ortholog is 100%.
Bootstrap support for Q29KQ4 as seed ortholog is 100%.

Group of orthologs #1897. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:75

G3J6F4              	100.00%		Q28WT0              	100.00%
G3J6S3              	19.23%		
G3JP63              	18.55%		
G3J2Y8              	17.29%		
G3JJ57              	17.10%		
G3JHI2              	16.71%		
G3JT02              	15.46%		
G3JU66              	15.07%		
G3JNI0              	14.69%		
G3J6F9              	14.59%		
G3JPE8              	13.62%		
G3J9M5              	13.53%		
G3J8M3              	13.33%		
G3JMI8              	12.46%		
G3JGL5              	12.37%		
G3JDZ1              	11.79%		
G3JKR3              	11.59%		
G3J8J9              	11.21%		
G3J9P9              	11.11%		
G3J3C5              	10.72%		
G3JTF4              	10.63%		
G3JS68              	9.47%		
G3J540              	9.18%		
G3JTG0              	9.18%		
G3J408              	8.41%		
G3JE82              	8.41%		
G3J6R1              	8.02%		
G3JN19              	6.38%		
G3JA46              	5.89%		
Bootstrap support for G3J6F4 as seed ortholog is 100%.
Bootstrap support for Q28WT0 as seed ortholog is 100%.

Group of orthologs #1898. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:30 D.pseudoobscura:75

G3J5K3              	100.00%		Q29BR3              	100.00%
G3J536              	18.04%		
Bootstrap support for G3J5K3 as seed ortholog is 81%.
Bootstrap support for Q29BR3 as seed ortholog is 100%.

Group of orthologs #1899. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:30

G3JGT4              	100.00%		Q29FF8              	100.00%
G3JQ78              	5.64%		
Bootstrap support for G3JGT4 as seed ortholog is 100%.
Bootstrap support for Q29FF8 as seed ortholog is 80%.

Group of orthologs #1900. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:75

G3J896              	100.00%		Q29CK2              	100.00%
Bootstrap support for G3J896 as seed ortholog is 100%.
Bootstrap support for Q29CK2 as seed ortholog is 100%.

Group of orthologs #1901. Best score 75 bits
Score difference with first non-orthologous sequence - C.militaris:75 D.pseudoobscura:75

G3JHX2              	100.00%		Q290L7              	100.00%
Bootstrap support for G3JHX2 as seed ortholog is 100%.
Bootstrap support for Q290L7 as seed ortholog is 100%.

Group of orthologs #1902. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:13 D.pseudoobscura:74

G3J9U5              	100.00%		Q295F3              	100.00%
                    	       		Q29N49              	9.21%
                    	       		Q299L5              	8.65%
Bootstrap support for G3J9U5 as seed ortholog is 82%.
Bootstrap support for Q295F3 as seed ortholog is 100%.

Group of orthologs #1903. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:74

G3J756              	100.00%		Q292C1              	100.00%
Bootstrap support for G3J756 as seed ortholog is 100%.
Bootstrap support for Q292C1 as seed ortholog is 100%.

Group of orthologs #1904. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:74

G3J900              	100.00%		Q294I2              	100.00%
Bootstrap support for G3J900 as seed ortholog is 100%.
Bootstrap support for Q294I2 as seed ortholog is 100%.

Group of orthologs #1905. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:74

G3JAF4              	100.00%		Q29D01              	100.00%
Bootstrap support for G3JAF4 as seed ortholog is 100%.
Bootstrap support for Q29D01 as seed ortholog is 100%.

Group of orthologs #1906. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:74

G3JFP5              	100.00%		Q29JF4              	100.00%
Bootstrap support for G3JFP5 as seed ortholog is 100%.
Bootstrap support for Q29JF4 as seed ortholog is 100%.

Group of orthologs #1907. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:74

G3JQC2              	100.00%		Q29MZ7              	100.00%
Bootstrap support for G3JQC2 as seed ortholog is 100%.
Bootstrap support for Q29MZ7 as seed ortholog is 100%.

Group of orthologs #1908. Best score 74 bits
Score difference with first non-orthologous sequence - C.militaris:74 D.pseudoobscura:19

G3JU91              	100.00%		Q29NY7              	100.00%
Bootstrap support for G3JU91 as seed ortholog is 100%.
Bootstrap support for Q29NY7 as seed ortholog is 69%.
Alternative seed ortholog is Q295I8 (19 bits away from this cluster)

Group of orthologs #1909. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 D.pseudoobscura:73

G3JR65              	100.00%		B5DN27              	100.00%
Bootstrap support for G3JR65 as seed ortholog is 100%.
Bootstrap support for B5DN27 as seed ortholog is 100%.

Group of orthologs #1910. Best score 73 bits
Score difference with first non-orthologous sequence - C.militaris:73 D.pseudoobscura:73

G3JER0              	100.00%		Q290Z0              	100.00%
Bootstrap support for G3JER0 as seed ortholog is 100%.
Bootstrap support for Q290Z0 as seed ortholog is 100%.

Group of orthologs #1911. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:22 D.pseudoobscura:72

G3JAG2              	100.00%		B5DVJ8              	100.00%
                    	       		B5DVJ7              	70.38%
                    	       		Q29B42              	68.48%
                    	       		Q29B43              	58.42%
                    	       		Q29B41              	51.90%
                    	       		Q29B44              	48.37%
                    	       		Q29B45              	47.28%
                    	       		Q29B39              	29.35%
Bootstrap support for G3JAG2 as seed ortholog is 75%.
Bootstrap support for B5DVJ8 as seed ortholog is 100%.

Group of orthologs #1912. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:18 D.pseudoobscura:25

G3J7N6              	100.00%		Q2LZH8              	100.00%
G3J473              	44.20%		
Bootstrap support for G3J7N6 as seed ortholog is 69%.
Alternative seed ortholog is G3JUG6 (18 bits away from this cluster)
Bootstrap support for Q2LZH8 as seed ortholog is 66%.
Alternative seed ortholog is Q298H3 (25 bits away from this cluster)

Group of orthologs #1913. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 D.pseudoobscura:72

G3JCX5              	100.00%		Q29AH5              	100.00%
Bootstrap support for G3JCX5 as seed ortholog is 100%.
Bootstrap support for Q29AH5 as seed ortholog is 100%.

Group of orthologs #1914. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 D.pseudoobscura:19

G3J875              	100.00%		Q29JG8              	100.00%
Bootstrap support for G3J875 as seed ortholog is 100%.
Bootstrap support for Q29JG8 as seed ortholog is 76%.

Group of orthologs #1915. Best score 72 bits
Score difference with first non-orthologous sequence - C.militaris:72 D.pseudoobscura:72

G3JLP3              	100.00%		Q2LYI4              	100.00%
Bootstrap support for G3JLP3 as seed ortholog is 100%.
Bootstrap support for Q2LYI4 as seed ortholog is 100%.

Group of orthologs #1916. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3JTN0              	100.00%		Q290I4              	100.00%
                    	       		B5DRP8              	31.75%
Bootstrap support for G3JTN0 as seed ortholog is 100%.
Bootstrap support for Q290I4 as seed ortholog is 100%.

Group of orthologs #1917. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3J459              	100.00%		Q292P0              	100.00%
Bootstrap support for G3J459 as seed ortholog is 100%.
Bootstrap support for Q292P0 as seed ortholog is 100%.

Group of orthologs #1918. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3J8I5              	100.00%		Q299C4              	100.00%
Bootstrap support for G3J8I5 as seed ortholog is 100%.
Bootstrap support for Q299C4 as seed ortholog is 100%.

Group of orthologs #1919. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3JI45              	100.00%		Q292Q8              	100.00%
Bootstrap support for G3JI45 as seed ortholog is 100%.
Bootstrap support for Q292Q8 as seed ortholog is 100%.

Group of orthologs #1920. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3J9J3              	100.00%		Q29P88              	100.00%
Bootstrap support for G3J9J3 as seed ortholog is 100%.
Bootstrap support for Q29P88 as seed ortholog is 100%.

Group of orthologs #1921. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3JKS1              	100.00%		Q29EQ2              	100.00%
Bootstrap support for G3JKS1 as seed ortholog is 100%.
Bootstrap support for Q29EQ2 as seed ortholog is 100%.

Group of orthologs #1922. Best score 71 bits
Score difference with first non-orthologous sequence - C.militaris:71 D.pseudoobscura:71

G3JUJ0              	100.00%		Q29FZ4              	100.00%
Bootstrap support for G3JUJ0 as seed ortholog is 100%.
Bootstrap support for Q29FZ4 as seed ortholog is 100%.

Group of orthologs #1923. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3JJF4              	100.00%		Q29HL6              	100.00%
                    	       		Q29DV6              	23.41%
Bootstrap support for G3JJF4 as seed ortholog is 100%.
Bootstrap support for Q29HL6 as seed ortholog is 100%.

Group of orthologs #1924. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3JGA0              	100.00%		Q28X33              	100.00%
Bootstrap support for G3JGA0 as seed ortholog is 100%.
Bootstrap support for Q28X33 as seed ortholog is 100%.

Group of orthologs #1925. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3JMJ4              	100.00%		Q29J37              	100.00%
Bootstrap support for G3JMJ4 as seed ortholog is 100%.
Bootstrap support for Q29J37 as seed ortholog is 100%.

Group of orthologs #1926. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3JTH3              	100.00%		Q29DD5              	100.00%
Bootstrap support for G3JTH3 as seed ortholog is 100%.
Bootstrap support for Q29DD5 as seed ortholog is 100%.

Group of orthologs #1927. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3JNN0              	100.00%		Q29PM6              	100.00%
Bootstrap support for G3JNN0 as seed ortholog is 100%.
Bootstrap support for Q29PM6 as seed ortholog is 100%.

Group of orthologs #1928. Best score 70 bits
Score difference with first non-orthologous sequence - C.militaris:70 D.pseudoobscura:70

G3JU80              	100.00%		Q29KY1              	100.00%
Bootstrap support for G3JU80 as seed ortholog is 100%.
Bootstrap support for Q29KY1 as seed ortholog is 100%.

Group of orthologs #1929. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JMN9              	100.00%		B5E0C5              	100.00%
                    	       		B5E102              	39.66%
                    	       		B5E105              	39.66%
                    	       		Q28WR3              	5.82%
Bootstrap support for G3JMN9 as seed ortholog is 100%.
Bootstrap support for B5E0C5 as seed ortholog is 100%.

Group of orthologs #1930. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JIS0              	100.00%		Q29JZ1              	100.00%
                    	       		B5DUZ4              	70.36%
                    	       		B5DK71              	52.14%
Bootstrap support for G3JIS0 as seed ortholog is 100%.
Bootstrap support for Q29JZ1 as seed ortholog is 100%.

Group of orthologs #1931. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JA72              	100.00%		Q295L9              	100.00%
                    	       		B5DQK5              	9.07%
Bootstrap support for G3JA72 as seed ortholog is 100%.
Bootstrap support for Q295L9 as seed ortholog is 100%.

Group of orthologs #1932. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JFV7              	100.00%		Q28ZZ9              	100.00%
                    	       		B5DNP9              	27.05%
Bootstrap support for G3JFV7 as seed ortholog is 100%.
Bootstrap support for Q28ZZ9 as seed ortholog is 100%.

Group of orthologs #1933. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:22

G3J7F5              	100.00%		Q29DX6              	100.00%
                    	       		B5DIG4              	38.84%
Bootstrap support for G3J7F5 as seed ortholog is 100%.
Bootstrap support for Q29DX6 as seed ortholog is 92%.

Group of orthologs #1934. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JBH7              	100.00%		B5DP61              	100.00%
Bootstrap support for G3JBH7 as seed ortholog is 100%.
Bootstrap support for B5DP61 as seed ortholog is 100%.

Group of orthologs #1935. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3J413              	100.00%		Q29E01              	100.00%
Bootstrap support for G3J413 as seed ortholog is 100%.
Bootstrap support for Q29E01 as seed ortholog is 100%.

Group of orthologs #1936. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3J3U8              	100.00%		Q2LZ85              	100.00%
Bootstrap support for G3J3U8 as seed ortholog is 100%.
Bootstrap support for Q2LZ85 as seed ortholog is 100%.

Group of orthologs #1937. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JF87              	100.00%		Q29KQ8              	100.00%
Bootstrap support for G3JF87 as seed ortholog is 100%.
Bootstrap support for Q29KQ8 as seed ortholog is 100%.

Group of orthologs #1938. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:3 D.pseudoobscura:16

G3JT87              	100.00%		Q29FR5              	100.00%
Bootstrap support for G3JT87 as seed ortholog is 71%.
Alternative seed ortholog is G3JAG0 (3 bits away from this cluster)
Bootstrap support for Q29FR5 as seed ortholog is 70%.
Alternative seed ortholog is Q29BT9 (16 bits away from this cluster)

Group of orthologs #1939. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JN66              	100.00%		Q29LZ9              	100.00%
Bootstrap support for G3JN66 as seed ortholog is 100%.
Bootstrap support for Q29LZ9 as seed ortholog is 100%.

Group of orthologs #1940. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JN09              	100.00%		Q2LZX1              	100.00%
Bootstrap support for G3JN09 as seed ortholog is 100%.
Bootstrap support for Q2LZX1 as seed ortholog is 100%.

Group of orthologs #1941. Best score 69 bits
Score difference with first non-orthologous sequence - C.militaris:69 D.pseudoobscura:69

G3JR71              	100.00%		Q2M153              	100.00%
Bootstrap support for G3JR71 as seed ortholog is 100%.
Bootstrap support for Q2M153 as seed ortholog is 100%.

Group of orthologs #1942. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3J6U5              	100.00%		Q28YB3              	100.00%
G3JJR3              	100.00%		Q28ZI2              	100.00%
G3JU00              	100.00%		Q29IF4              	100.00%
G3JFA8              	100.00%		Q28WP3              	100.00%
G3J9C7              	100.00%		Q29NJ2              	100.00%
G3JJB1              	100.00%		Q291M4              	100.00%
G3JKG2              	49.29%		B5DHE6              	43.02%
G3JLS1              	38.34%		Q292H7              	42.70%
G3JT03              	37.66%		B5DZN9              	37.12%
G3J479              	32.07%		Q291Y2              	35.79%
G3J337              	31.47%		Q291M5              	35.35%
G3J4H3              	31.32%		Q291M7              	34.64%
G3JFB5              	31.11%		Q291M6              	32.58%
G3JGL2              	29.16%		B5DZS1              	32.27%
G3JUH5              	28.90%		Q29H64              	31.57%
G3JP93              	28.86%		B5DVT7              	30.94%
G3JHL5              	26.89%		B5DZS0              	25.80%
G3JLA0              	26.48%		Q29LH5              	25.58%
G3J7L5              	25.49%		Q29MA0              	25.48%
G3JT56              	23.65%		Q298B7              	24.57%
G3J498              	23.54%		B5DHW7              	24.54%
G3JT68              	22.57%		Q291F1              	24.35%
G3J6D3              	22.14%		Q29KZ2              	19.51%
G3JSU8              	21.71%		Q299Q0              	9.36%
G3J2X2              	20.73%		Q29LK0              	8.22%
G3JB68              	20.49%		
G3JIT4              	18.68%		
G3JKI1              	18.67%		
G3JFH9              	18.24%		
G3JNM2              	18.13%		
G3J4K3              	17.49%		
G3JF43              	16.20%		
G3JIS1              	15.55%		
G3J6K4              	14.48%		
G3JTB4              	14.04%		
G3JRZ0              	14.04%		
G3JIU5              	13.93%		
G3JNI7              	13.71%		
G3J4W4              	13.63%		
G3JDV1              	13.24%		
G3J9F3              	10.80%		
G3JUJ9              	10.37%		
G3JJD5              	10.04%		
G3J791              	9.63%		
G3J3P5              	9.12%		
G3JP72              	8.11%		
G3JLB2              	7.51%		
G3J9N6              	7.13%		
G3JBJ2              	7.10%		
G3JCT9              	5.40%		
Bootstrap support for G3J6U5 as seed ortholog is 100%.
Bootstrap support for G3JJR3 as seed ortholog is 100%.
Bootstrap support for G3JU00 as seed ortholog is 100%.
Bootstrap support for G3JFA8 as seed ortholog is 100%.
Bootstrap support for G3J9C7 as seed ortholog is 100%.
Bootstrap support for G3JJB1 as seed ortholog is 100%.
Bootstrap support for Q28YB3 as seed ortholog is 100%.
Bootstrap support for Q28ZI2 as seed ortholog is 100%.
Bootstrap support for Q29IF4 as seed ortholog is 100%.
Bootstrap support for Q28WP3 as seed ortholog is 100%.
Bootstrap support for Q29NJ2 as seed ortholog is 100%.
Bootstrap support for Q291M4 as seed ortholog is 100%.

Group of orthologs #1943. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JQ89              	100.00%		Q292Y8              	100.00%
G3J790              	28.88%		Q292Y9              	47.75%
G3JQW8              	22.33%		Q295U9              	42.16%
G3JAL4              	11.52%		
G3J4G6              	9.39%		
Bootstrap support for G3JQ89 as seed ortholog is 100%.
Bootstrap support for Q292Y8 as seed ortholog is 100%.

Group of orthologs #1944. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:5

G3JHC9              	100.00%		Q29GL6              	100.00%
                    	       		B5DMI5              	8.43%
Bootstrap support for G3JHC9 as seed ortholog is 100%.
Bootstrap support for Q29GL6 as seed ortholog is 52%.
Alternative seed ortholog is Q291U4 (5 bits away from this cluster)

Group of orthologs #1945. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JCH5              	100.00%		B5DSJ8              	100.00%
Bootstrap support for G3JCH5 as seed ortholog is 100%.
Bootstrap support for B5DSJ8 as seed ortholog is 100%.

Group of orthologs #1946. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JJ12              	100.00%		B5E1D1              	100.00%
Bootstrap support for G3JJ12 as seed ortholog is 100%.
Bootstrap support for B5E1D1 as seed ortholog is 100%.

Group of orthologs #1947. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JEZ7              	100.00%		Q293A6              	100.00%
Bootstrap support for G3JEZ7 as seed ortholog is 100%.
Bootstrap support for Q293A6 as seed ortholog is 100%.

Group of orthologs #1948. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JIX6              	100.00%		Q292S4              	100.00%
Bootstrap support for G3JIX6 as seed ortholog is 100%.
Bootstrap support for Q292S4 as seed ortholog is 100%.

Group of orthologs #1949. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JJV4              	100.00%		Q296Z6              	100.00%
Bootstrap support for G3JJV4 as seed ortholog is 100%.
Bootstrap support for Q296Z6 as seed ortholog is 100%.

Group of orthologs #1950. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JQN9              	100.00%		Q295F8              	100.00%
Bootstrap support for G3JQN9 as seed ortholog is 100%.
Bootstrap support for Q295F8 as seed ortholog is 100%.

Group of orthologs #1951. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JIY8              	100.00%		Q29F00              	100.00%
Bootstrap support for G3JIY8 as seed ortholog is 100%.
Bootstrap support for Q29F00 as seed ortholog is 100%.

Group of orthologs #1952. Best score 68 bits
Score difference with first non-orthologous sequence - C.militaris:68 D.pseudoobscura:68

G3JR04              	100.00%		Q29NM1              	100.00%
Bootstrap support for G3JR04 as seed ortholog is 100%.
Bootstrap support for Q29NM1 as seed ortholog is 100%.

Group of orthologs #1953. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:20

G3JFC4              	100.00%		Q29FV4              	100.00%
                    	       		B5DIC1              	31.11%
Bootstrap support for G3JFC4 as seed ortholog is 100%.
Bootstrap support for Q29FV4 as seed ortholog is 79%.

Group of orthologs #1954. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:67

G3JHC4              	100.00%		Q29H23              	100.00%
                    	       		B5DII8              	46.85%
Bootstrap support for G3JHC4 as seed ortholog is 100%.
Bootstrap support for Q29H23 as seed ortholog is 100%.

Group of orthologs #1955. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:67

G3JHN4              	100.00%		Q299N7              	100.00%
Bootstrap support for G3JHN4 as seed ortholog is 100%.
Bootstrap support for Q299N7 as seed ortholog is 100%.

Group of orthologs #1956. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:67

G3J809              	100.00%		Q29MC8              	100.00%
Bootstrap support for G3J809 as seed ortholog is 100%.
Bootstrap support for Q29MC8 as seed ortholog is 100%.

Group of orthologs #1957. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:67

G3JD66              	100.00%		Q2LYQ4              	100.00%
Bootstrap support for G3JD66 as seed ortholog is 100%.
Bootstrap support for Q2LYQ4 as seed ortholog is 100%.

Group of orthologs #1958. Best score 67 bits
Score difference with first non-orthologous sequence - C.militaris:67 D.pseudoobscura:67

G3JCE4              	100.00%		Q2LZL8              	100.00%
Bootstrap support for G3JCE4 as seed ortholog is 100%.
Bootstrap support for Q2LZL8 as seed ortholog is 100%.

Group of orthologs #1959. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:66

G3JB82              	100.00%		B5DKW1              	100.00%
G3JTN7              	13.33%		B5DPG9              	49.43%
                    	       		B5DVD6              	43.80%
                    	       		Q29JG0              	17.85%
Bootstrap support for G3JB82 as seed ortholog is 100%.
Bootstrap support for B5DKW1 as seed ortholog is 100%.

Group of orthologs #1960. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:66

G3J822              	100.00%		Q29KW4              	100.00%
                    	       		B5DJL1              	17.92%
Bootstrap support for G3J822 as seed ortholog is 100%.
Bootstrap support for Q29KW4 as seed ortholog is 100%.

Group of orthologs #1961. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:66

G3JHP6              	100.00%		B5DR16              	100.00%
Bootstrap support for G3JHP6 as seed ortholog is 100%.
Bootstrap support for B5DR16 as seed ortholog is 100%.

Group of orthologs #1962. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:66

G3JJ97              	100.00%		B5E172              	100.00%
Bootstrap support for G3JJ97 as seed ortholog is 100%.
Bootstrap support for B5E172 as seed ortholog is 100%.

Group of orthologs #1963. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:66

G3JJL9              	100.00%		Q29BU2              	100.00%
Bootstrap support for G3JJL9 as seed ortholog is 100%.
Bootstrap support for Q29BU2 as seed ortholog is 100%.

Group of orthologs #1964. Best score 66 bits
Score difference with first non-orthologous sequence - C.militaris:66 D.pseudoobscura:66

G3JH80              	100.00%		Q29G22              	100.00%
Bootstrap support for G3JH80 as seed ortholog is 100%.
Bootstrap support for Q29G22 as seed ortholog is 100%.

Group of orthologs #1965. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 D.pseudoobscura:65

G3JI86              	100.00%		Q292N6              	100.00%
                    	       		Q28ZL8              	33.83%
                    	       		Q295M6              	19.45%
Bootstrap support for G3JI86 as seed ortholog is 100%.
Bootstrap support for Q292N6 as seed ortholog is 100%.

Group of orthologs #1966. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 D.pseudoobscura:65

G3JIY7              	100.00%		Q29HW2              	100.00%
                    	       		Q29HW1              	24.96%
Bootstrap support for G3JIY7 as seed ortholog is 100%.
Bootstrap support for Q29HW2 as seed ortholog is 100%.

Group of orthologs #1967. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 D.pseudoobscura:65

G3JM51              	100.00%		Q297J9              	100.00%
Bootstrap support for G3JM51 as seed ortholog is 100%.
Bootstrap support for Q297J9 as seed ortholog is 100%.

Group of orthologs #1968. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 D.pseudoobscura:65

G3J7R8              	100.00%		Q29NW0              	100.00%
Bootstrap support for G3J7R8 as seed ortholog is 100%.
Bootstrap support for Q29NW0 as seed ortholog is 100%.

Group of orthologs #1969. Best score 65 bits
Score difference with first non-orthologous sequence - C.militaris:65 D.pseudoobscura:65

G3JP32              	100.00%		Q29CK7              	100.00%
Bootstrap support for G3JP32 as seed ortholog is 100%.
Bootstrap support for Q29CK7 as seed ortholog is 100%.

Group of orthologs #1970. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:5

G3JBC5              	100.00%		Q292E1              	100.00%
                    	       		Q29FU9              	14.62%
Bootstrap support for G3JBC5 as seed ortholog is 100%.
Bootstrap support for Q292E1 as seed ortholog is 56%.
Alternative seed ortholog is B5DXQ8 (5 bits away from this cluster)

Group of orthologs #1971. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:64

G3J8H5              	100.00%		Q29M90              	100.00%
                    	       		B5DV52              	95.06%
Bootstrap support for G3J8H5 as seed ortholog is 100%.
Bootstrap support for Q29M90 as seed ortholog is 100%.

Group of orthologs #1972. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:64

G3J525              	100.00%		B5E0W2              	100.00%
Bootstrap support for G3J525 as seed ortholog is 100%.
Bootstrap support for B5E0W2 as seed ortholog is 100%.

Group of orthologs #1973. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:64

G3J5T5              	100.00%		Q296E5              	100.00%
Bootstrap support for G3J5T5 as seed ortholog is 100%.
Bootstrap support for Q296E5 as seed ortholog is 100%.

Group of orthologs #1974. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:64

G3J379              	100.00%		Q29ED8              	100.00%
Bootstrap support for G3J379 as seed ortholog is 100%.
Bootstrap support for Q29ED8 as seed ortholog is 100%.

Group of orthologs #1975. Best score 64 bits
Score difference with first non-orthologous sequence - C.militaris:64 D.pseudoobscura:64

G3JMZ8              	100.00%		Q29AF4              	100.00%
Bootstrap support for G3JMZ8 as seed ortholog is 100%.
Bootstrap support for Q29AF4 as seed ortholog is 100%.

Group of orthologs #1976. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:3 D.pseudoobscura:63

G3JEI0              	100.00%		Q29FB3              	100.00%
                    	       		Q29FB2              	31.47%
                    	       		B5DP64              	24.14%
Bootstrap support for G3JEI0 as seed ortholog is 56%.
Alternative seed ortholog is G3J8H6 (3 bits away from this cluster)
Bootstrap support for Q29FB3 as seed ortholog is 100%.

Group of orthologs #1977. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:12

G3JUP5              	100.00%		B5DJ15              	100.00%
                    	       		B5DJ11              	97.53%
Bootstrap support for G3JUP5 as seed ortholog is 100%.
Bootstrap support for B5DJ15 as seed ortholog is 59%.
Alternative seed ortholog is Q29PN4 (12 bits away from this cluster)

Group of orthologs #1978. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:63

G3J3W3              	100.00%		B5DQS3              	100.00%
Bootstrap support for G3J3W3 as seed ortholog is 100%.
Bootstrap support for B5DQS3 as seed ortholog is 100%.

Group of orthologs #1979. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:63

G3JBD6              	100.00%		Q28ZG7              	100.00%
Bootstrap support for G3JBD6 as seed ortholog is 100%.
Bootstrap support for Q28ZG7 as seed ortholog is 100%.

Group of orthologs #1980. Best score 63 bits
Score difference with first non-orthologous sequence - C.militaris:63 D.pseudoobscura:63

G3J7G3              	100.00%		Q29AA0              	100.00%
Bootstrap support for G3J7G3 as seed ortholog is 100%.
Bootstrap support for Q29AA0 as seed ortholog is 100%.

Group of orthologs #1981. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:6 D.pseudoobscura:62

G3J6F2              	100.00%		B5DYA6              	100.00%
G3JBJ9              	100.00%		B5DTQ5              	100.00%
                    	       		B5DW62              	96.71%
                    	       		B5DTQ6              	80.81%
                    	       		B5DW61              	80.55%
                    	       		Q29BN0              	80.35%
                    	       		Q29BN1              	69.72%
Bootstrap support for G3J6F2 as seed ortholog is 42%.
Alternative seed ortholog is G3JS26 (6 bits away from this cluster)
Bootstrap support for G3JBJ9 as seed ortholog is 56%.
Alternative seed ortholog is G3JS26 (6 bits away from this cluster)
Bootstrap support for B5DYA6 as seed ortholog is 100%.
Bootstrap support for B5DTQ5 as seed ortholog is 100%.

Group of orthologs #1982. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3JTG3              	100.00%		B5DJ48              	100.00%
                    	       		Q29NE3              	47.72%
                    	       		B5DJ49              	44.16%
Bootstrap support for G3JTG3 as seed ortholog is 100%.
Bootstrap support for B5DJ48 as seed ortholog is 100%.

Group of orthologs #1983. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:15 D.pseudoobscura:62

G3JIR8              	100.00%		Q28YR2              	100.00%
                    	       		Q28Z16              	45.59%
                    	       		Q293A8              	14.11%
Bootstrap support for G3JIR8 as seed ortholog is 69%.
Alternative seed ortholog is G3JME2 (15 bits away from this cluster)
Bootstrap support for Q28YR2 as seed ortholog is 100%.

Group of orthologs #1984. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:20 D.pseudoobscura:62

G3J369              	100.00%		Q292I1              	100.00%
                    	       		Q29FX9              	22.68%
Bootstrap support for G3J369 as seed ortholog is 73%.
Alternative seed ortholog is G3JPU9 (20 bits away from this cluster)
Bootstrap support for Q292I1 as seed ortholog is 100%.

Group of orthologs #1985. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3JLZ4              	100.00%		Q29F25              	100.00%
                    	       		Q29F27              	8.02%
Bootstrap support for G3JLZ4 as seed ortholog is 100%.
Bootstrap support for Q29F25 as seed ortholog is 100%.

Group of orthologs #1986. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3J985              	100.00%		Q298I2              	100.00%
Bootstrap support for G3J985 as seed ortholog is 100%.
Bootstrap support for Q298I2 as seed ortholog is 100%.

Group of orthologs #1987. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3JFT4              	100.00%		Q298L2              	100.00%
Bootstrap support for G3JFT4 as seed ortholog is 100%.
Bootstrap support for Q298L2 as seed ortholog is 100%.

Group of orthologs #1988. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3JLN1              	100.00%		Q291A8              	100.00%
Bootstrap support for G3JLN1 as seed ortholog is 100%.
Bootstrap support for Q291A8 as seed ortholog is 100%.

Group of orthologs #1989. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3JF04              	100.00%		Q29I40              	100.00%
Bootstrap support for G3JF04 as seed ortholog is 100%.
Bootstrap support for Q29I40 as seed ortholog is 100%.

Group of orthologs #1990. Best score 62 bits
Score difference with first non-orthologous sequence - C.militaris:62 D.pseudoobscura:62

G3JGJ8              	100.00%		Q2M0K3              	100.00%
Bootstrap support for G3JGJ8 as seed ortholog is 100%.
Bootstrap support for Q2M0K3 as seed ortholog is 100%.

Group of orthologs #1991. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:61

G3JKF7              	100.00%		B5DI99              	100.00%
Bootstrap support for G3JKF7 as seed ortholog is 100%.
Bootstrap support for B5DI99 as seed ortholog is 100%.

Group of orthologs #1992. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:61

G3J772              	100.00%		Q299C7              	100.00%
Bootstrap support for G3J772 as seed ortholog is 100%.
Bootstrap support for Q299C7 as seed ortholog is 100%.

Group of orthologs #1993. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:61

G3JE92              	100.00%		Q29P86              	100.00%
Bootstrap support for G3JE92 as seed ortholog is 100%.
Bootstrap support for Q29P86 as seed ortholog is 100%.

Group of orthologs #1994. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:61

G3JTH9              	100.00%		Q29EF9              	100.00%
Bootstrap support for G3JTH9 as seed ortholog is 100%.
Bootstrap support for Q29EF9 as seed ortholog is 100%.

Group of orthologs #1995. Best score 61 bits
Score difference with first non-orthologous sequence - C.militaris:61 D.pseudoobscura:61

G3JTH0              	100.00%		Q29JG5              	100.00%
Bootstrap support for G3JTH0 as seed ortholog is 100%.
Bootstrap support for Q29JG5 as seed ortholog is 100%.

Group of orthologs #1996. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:60

G3JCJ4              	100.00%		Q28ZG1              	100.00%
Bootstrap support for G3JCJ4 as seed ortholog is 100%.
Bootstrap support for Q28ZG1 as seed ortholog is 100%.

Group of orthologs #1997. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:60

G3JMG6              	100.00%		B5DVJ4              	100.00%
Bootstrap support for G3JMG6 as seed ortholog is 100%.
Bootstrap support for B5DVJ4 as seed ortholog is 100%.

Group of orthologs #1998. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:60

G3JH97              	100.00%		Q291V2              	100.00%
Bootstrap support for G3JH97 as seed ortholog is 100%.
Bootstrap support for Q291V2 as seed ortholog is 100%.

Group of orthologs #1999. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:2

G3JD33              	100.00%		Q29HM0              	100.00%
Bootstrap support for G3JD33 as seed ortholog is 100%.
Bootstrap support for Q29HM0 as seed ortholog is 56%.
Alternative seed ortholog is Q28XU2 (2 bits away from this cluster)

Group of orthologs #2000. Best score 60 bits
Score difference with first non-orthologous sequence - C.militaris:60 D.pseudoobscura:60

G3JQY7              	100.00%		Q295J3              	100.00%
Bootstrap support for G3JQY7 as seed ortholog is 100%.
Bootstrap support for Q295J3 as seed ortholog is 100%.

Group of orthologs #2001. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:9 D.pseudoobscura:59

G3JMU3              	100.00%		Q28YS9              	100.00%
                    	       		Q28YT0              	50.39%
                    	       		Q28YT1              	42.30%
                    	       		Q28YS7              	41.25%
                    	       		Q28YS5              	40.21%
                    	       		Q28YS6              	39.43%
                    	       		B5DZR7              	37.60%
                    	       		Q28YS8              	36.81%
                    	       		Q28ZB5              	25.07%
Bootstrap support for G3JMU3 as seed ortholog is 64%.
Alternative seed ortholog is G3JTZ6 (9 bits away from this cluster)
Bootstrap support for Q28YS9 as seed ortholog is 100%.

Group of orthologs #2002. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:59

G3J6W0              	100.00%		B5DIX7              	100.00%
                    	       		B5DIX8              	92.31%
Bootstrap support for G3J6W0 as seed ortholog is 100%.
Bootstrap support for B5DIX7 as seed ortholog is 100%.

Group of orthologs #2003. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:59

G3J6V1              	100.00%		Q29LN6              	100.00%
                    	       		B5DIH0              	29.52%
Bootstrap support for G3J6V1 as seed ortholog is 100%.
Bootstrap support for Q29LN6 as seed ortholog is 100%.

Group of orthologs #2004. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:59

G3JF80              	100.00%		Q28XH8              	100.00%
Bootstrap support for G3JF80 as seed ortholog is 100%.
Bootstrap support for Q28XH8 as seed ortholog is 100%.

Group of orthologs #2005. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:15 D.pseudoobscura:59

G3J3K3              	100.00%		Q29KW3              	100.00%
Bootstrap support for G3J3K3 as seed ortholog is 49%.
Alternative seed ortholog is G3JR23 (15 bits away from this cluster)
Bootstrap support for Q29KW3 as seed ortholog is 100%.

Group of orthologs #2006. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:59

G3JJA7              	100.00%		Q295S8              	100.00%
Bootstrap support for G3JJA7 as seed ortholog is 100%.
Bootstrap support for Q295S8 as seed ortholog is 100%.

Group of orthologs #2007. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:59

G3JFP4              	100.00%		Q29GE1              	100.00%
Bootstrap support for G3JFP4 as seed ortholog is 100%.
Bootstrap support for Q29GE1 as seed ortholog is 100%.

Group of orthologs #2008. Best score 59 bits
Score difference with first non-orthologous sequence - C.militaris:59 D.pseudoobscura:59

G3JRY7              	100.00%		Q29HV3              	100.00%
Bootstrap support for G3JRY7 as seed ortholog is 100%.
Bootstrap support for Q29HV3 as seed ortholog is 100%.

Group of orthologs #2009. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 D.pseudoobscura:58

G3J2Q7              	100.00%		B5DQY2              	100.00%
Bootstrap support for G3J2Q7 as seed ortholog is 100%.
Bootstrap support for B5DQY2 as seed ortholog is 100%.

Group of orthologs #2010. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 D.pseudoobscura:58

G3JF24              	100.00%		B5DWP2              	100.00%
Bootstrap support for G3JF24 as seed ortholog is 100%.
Bootstrap support for B5DWP2 as seed ortholog is 100%.

Group of orthologs #2011. Best score 58 bits
Score difference with first non-orthologous sequence - C.militaris:58 D.pseudoobscura:58

G3J6P0              	100.00%		Q29MZ0              	100.00%
Bootstrap support for G3J6P0 as seed ortholog is 100%.
Bootstrap support for Q29MZ0 as seed ortholog is 100%.

Group of orthologs #2012. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:57

G3J4N9              	100.00%		B5DKG7              	100.00%
Bootstrap support for G3J4N9 as seed ortholog is 100%.
Bootstrap support for B5DKG7 as seed ortholog is 100%.

Group of orthologs #2013. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:57

G3J3M5              	100.00%		Q29CK5              	100.00%
Bootstrap support for G3J3M5 as seed ortholog is 100%.
Bootstrap support for Q29CK5 as seed ortholog is 100%.

Group of orthologs #2014. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:57

G3JN67              	100.00%		B5DVG5              	100.00%
Bootstrap support for G3JN67 as seed ortholog is 100%.
Bootstrap support for B5DVG5 as seed ortholog is 100%.

Group of orthologs #2015. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:57

G3JKD8              	100.00%		Q28Z07              	100.00%
Bootstrap support for G3JKD8 as seed ortholog is 100%.
Bootstrap support for Q28Z07 as seed ortholog is 100%.

Group of orthologs #2016. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:57

G3J7G5              	100.00%		Q29MN0              	100.00%
Bootstrap support for G3J7G5 as seed ortholog is 100%.
Bootstrap support for Q29MN0 as seed ortholog is 100%.

Group of orthologs #2017. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:57

G3JNK5              	100.00%		Q29D12              	100.00%
Bootstrap support for G3JNK5 as seed ortholog is 100%.
Bootstrap support for Q29D12 as seed ortholog is 100%.

Group of orthologs #2018. Best score 57 bits
Score difference with first non-orthologous sequence - C.militaris:57 D.pseudoobscura:15

G3JQD7              	100.00%		Q29BD9              	100.00%
Bootstrap support for G3JQD7 as seed ortholog is 100%.
Bootstrap support for Q29BD9 as seed ortholog is 66%.
Alternative seed ortholog is Q28XI6 (15 bits away from this cluster)

Group of orthologs #2019. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JQQ1              	100.00%		Q29K70              	100.00%
                    	       		Q2M0R9              	16.29%
                    	       		Q29AD2              	14.96%
                    	       		Q29GS7              	14.20%
                    	       		B5DNR6              	12.31%
                    	       		B5DMT7              	10.04%
                    	       		B5DYL3              	8.71%
                    	       		Q298T1              	8.52%
                    	       		Q29CG6              	8.52%
                    	       		Q29B79              	7.77%
                    	       		B5DYL4              	7.01%
                    	       		B5DHH4              	6.25%
Bootstrap support for G3JQQ1 as seed ortholog is 100%.
Bootstrap support for Q29K70 as seed ortholog is 100%.

Group of orthologs #2020. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JDK8              	100.00%		Q297T3              	100.00%
G3J9R9              	28.23%		Q29JH0              	16.11%
G3J815              	17.73%		
Bootstrap support for G3JDK8 as seed ortholog is 100%.
Bootstrap support for Q297T3 as seed ortholog is 100%.

Group of orthologs #2021. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3J5X9              	100.00%		B5DUE3              	100.00%
Bootstrap support for G3J5X9 as seed ortholog is 100%.
Bootstrap support for B5DUE3 as seed ortholog is 100%.

Group of orthologs #2022. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3J4M3              	100.00%		I5AQ02              	100.00%
Bootstrap support for G3J4M3 as seed ortholog is 100%.
Bootstrap support for I5AQ02 as seed ortholog is 100%.

Group of orthologs #2023. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JD60              	100.00%		Q293A1              	100.00%
Bootstrap support for G3JD60 as seed ortholog is 100%.
Bootstrap support for Q293A1 as seed ortholog is 100%.

Group of orthologs #2024. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3J5N5              	100.00%		Q29F14              	100.00%
Bootstrap support for G3J5N5 as seed ortholog is 100%.
Bootstrap support for Q29F14 as seed ortholog is 100%.

Group of orthologs #2025. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3J779              	100.00%		Q29DH7              	100.00%
Bootstrap support for G3J779 as seed ortholog is 100%.
Bootstrap support for Q29DH7 as seed ortholog is 100%.

Group of orthologs #2026. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JC94              	100.00%		Q298E0              	100.00%
Bootstrap support for G3JC94 as seed ortholog is 100%.
Bootstrap support for Q298E0 as seed ortholog is 100%.

Group of orthologs #2027. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JAF7              	100.00%		Q29LK3              	100.00%
Bootstrap support for G3JAF7 as seed ortholog is 100%.
Bootstrap support for Q29LK3 as seed ortholog is 100%.

Group of orthologs #2028. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JQ47              	100.00%		Q297K1              	100.00%
Bootstrap support for G3JQ47 as seed ortholog is 100%.
Bootstrap support for Q297K1 as seed ortholog is 100%.

Group of orthologs #2029. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JG03              	100.00%		Q29ML7              	100.00%
Bootstrap support for G3JG03 as seed ortholog is 100%.
Bootstrap support for Q29ML7 as seed ortholog is 100%.

Group of orthologs #2030. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JR08              	100.00%		Q29LJ7              	100.00%
Bootstrap support for G3JR08 as seed ortholog is 100%.
Bootstrap support for Q29LJ7 as seed ortholog is 100%.

Group of orthologs #2031. Best score 56 bits
Score difference with first non-orthologous sequence - C.militaris:56 D.pseudoobscura:56

G3JUA2              	100.00%		Q29MY6              	100.00%
Bootstrap support for G3JUA2 as seed ortholog is 100%.
Bootstrap support for Q29MY6 as seed ortholog is 100%.

Group of orthologs #2032. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:55

G3J7M8              	100.00%		Q29K58              	100.00%
                    	       		B5DK15              	26.50%
                    	       		B5DK16              	25.45%
Bootstrap support for G3J7M8 as seed ortholog is 100%.
Bootstrap support for Q29K58 as seed ortholog is 100%.

Group of orthologs #2033. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:7

G3J6B0              	100.00%		B5DRK9              	100.00%
                    	       		B5DN13              	39.56%
Bootstrap support for G3J6B0 as seed ortholog is 100%.
Bootstrap support for B5DRK9 as seed ortholog is 68%.
Alternative seed ortholog is Q28ZZ0 (7 bits away from this cluster)

Group of orthologs #2034. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:55

G3JET4              	100.00%		Q28ZM8              	100.00%
Bootstrap support for G3JET4 as seed ortholog is 100%.
Bootstrap support for Q28ZM8 as seed ortholog is 100%.

Group of orthologs #2035. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:55

G3JHQ3              	100.00%		Q295P7              	100.00%
Bootstrap support for G3JHQ3 as seed ortholog is 100%.
Bootstrap support for Q295P7 as seed ortholog is 100%.

Group of orthologs #2036. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:55

G3J483              	100.00%		Q2LYV9              	100.00%
Bootstrap support for G3J483 as seed ortholog is 100%.
Bootstrap support for Q2LYV9 as seed ortholog is 100%.

Group of orthologs #2037. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:55

G3JEL8              	100.00%		Q29KY0              	100.00%
Bootstrap support for G3JEL8 as seed ortholog is 100%.
Bootstrap support for Q29KY0 as seed ortholog is 100%.

Group of orthologs #2038. Best score 55 bits
Score difference with first non-orthologous sequence - C.militaris:55 D.pseudoobscura:55

G3JUN7              	100.00%		Q2M1D7              	100.00%
Bootstrap support for G3JUN7 as seed ortholog is 100%.
Bootstrap support for Q2M1D7 as seed ortholog is 100%.

Group of orthologs #2039. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3JMS8              	100.00%		Q29GA3              	100.00%
                    	       		B5DX93              	48.87%
                    	       		I5AP81              	43.19%
                    	       		Q29ML4              	32.64%
                    	       		B5DIB0              	26.35%
                    	       		Q298F7              	24.69%
                    	       		Q298F6              	24.35%
                    	       		B5E1B1              	23.73%
                    	       		I5AMP7              	23.73%
                    	       		Q298F8              	23.65%
                    	       		Q2M053              	22.51%
                    	       		Q298F5              	18.76%
Bootstrap support for G3JMS8 as seed ortholog is 100%.
Bootstrap support for Q29GA3 as seed ortholog is 100%.

Group of orthologs #2040. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3JKA6              	100.00%		Q29L05              	100.00%
G3JS16              	9.39%		
Bootstrap support for G3JKA6 as seed ortholog is 100%.
Bootstrap support for Q29L05 as seed ortholog is 100%.

Group of orthologs #2041. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3J8R9              	100.00%		I7LSV0              	100.00%
Bootstrap support for G3J8R9 as seed ortholog is 100%.
Bootstrap support for I7LSV0 as seed ortholog is 100%.

Group of orthologs #2042. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3JM13              	100.00%		B5DZD0              	100.00%
Bootstrap support for G3JM13 as seed ortholog is 100%.
Bootstrap support for B5DZD0 as seed ortholog is 100%.

Group of orthologs #2043. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3JN93              	100.00%		Q293M1              	100.00%
Bootstrap support for G3JN93 as seed ortholog is 100%.
Bootstrap support for Q293M1 as seed ortholog is 100%.

Group of orthologs #2044. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3JE59              	100.00%		Q29PL9              	100.00%
Bootstrap support for G3JE59 as seed ortholog is 100%.
Bootstrap support for Q29PL9 as seed ortholog is 100%.

Group of orthologs #2045. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:12

G3JP25              	100.00%		Q29E35              	100.00%
Bootstrap support for G3JP25 as seed ortholog is 100%.
Bootstrap support for Q29E35 as seed ortholog is 66%.
Alternative seed ortholog is Q29NY0 (12 bits away from this cluster)

Group of orthologs #2046. Best score 54 bits
Score difference with first non-orthologous sequence - C.militaris:54 D.pseudoobscura:54

G3JQA5              	100.00%		Q29ML3              	100.00%
Bootstrap support for G3JQA5 as seed ortholog is 100%.
Bootstrap support for Q29ML3 as seed ortholog is 100%.

Group of orthologs #2047. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3J947              	100.00%		B5DNL7              	100.00%
                    	       		Q291C8              	53.14%
Bootstrap support for G3J947 as seed ortholog is 100%.
Bootstrap support for B5DNL7 as seed ortholog is 100%.

Group of orthologs #2048. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3JRK6              	100.00%		B5DXS5              	100.00%
Bootstrap support for G3JRK6 as seed ortholog is 100%.
Bootstrap support for B5DXS5 as seed ortholog is 100%.

Group of orthologs #2049. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3JL67              	100.00%		Q29A49              	100.00%
Bootstrap support for G3JL67 as seed ortholog is 100%.
Bootstrap support for Q29A49 as seed ortholog is 100%.

Group of orthologs #2050. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3JQG3              	100.00%		Q296J6              	100.00%
Bootstrap support for G3JQG3 as seed ortholog is 100%.
Bootstrap support for Q296J6 as seed ortholog is 100%.

Group of orthologs #2051. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3JD68              	100.00%		Q2LZB2              	100.00%
Bootstrap support for G3JD68 as seed ortholog is 100%.
Bootstrap support for Q2LZB2 as seed ortholog is 100%.

Group of orthologs #2052. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3JTI9              	100.00%		Q29AB5              	100.00%
Bootstrap support for G3JTI9 as seed ortholog is 100%.
Bootstrap support for Q29AB5 as seed ortholog is 100%.

Group of orthologs #2053. Best score 53 bits
Score difference with first non-orthologous sequence - C.militaris:53 D.pseudoobscura:53

G3JPW6              	100.00%		Q29EH1              	100.00%
Bootstrap support for G3JPW6 as seed ortholog is 100%.
Bootstrap support for Q29EH1 as seed ortholog is 100%.

Group of orthologs #2054. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JDM5              	100.00%		Q2M0T7              	100.00%
                    	       		Q29MW1              	44.35%
                    	       		Q2M0T5              	37.90%
                    	       		B5DQM7              	35.48%
                    	       		Q29D23              	7.26%
Bootstrap support for G3JDM5 as seed ortholog is 100%.
Bootstrap support for Q2M0T7 as seed ortholog is 100%.

Group of orthologs #2055. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:3

G3JM98              	100.00%		B5DLB1              	100.00%
                    	       		B5DIU5              	68.57%
Bootstrap support for G3JM98 as seed ortholog is 100%.
Bootstrap support for B5DLB1 as seed ortholog is 63%.
Alternative seed ortholog is B5DL92 (3 bits away from this cluster)

Group of orthologs #2056. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3J8N1              	100.00%		Q29KQ5              	100.00%
                    	       		Q2LZW1              	13.78%
Bootstrap support for G3J8N1 as seed ortholog is 100%.
Bootstrap support for Q29KQ5 as seed ortholog is 100%.

Group of orthologs #2057. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3J7A1              	100.00%		Q29C85              	100.00%
Bootstrap support for G3J7A1 as seed ortholog is 100%.
Bootstrap support for Q29C85 as seed ortholog is 100%.

Group of orthologs #2058. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JJE9              	100.00%		Q28YR9              	100.00%
Bootstrap support for G3JJE9 as seed ortholog is 100%.
Bootstrap support for Q28YR9 as seed ortholog is 100%.

Group of orthologs #2059. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JEC8              	100.00%		Q29CI5              	100.00%
Bootstrap support for G3JEC8 as seed ortholog is 100%.
Bootstrap support for Q29CI5 as seed ortholog is 100%.

Group of orthologs #2060. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JN14              	100.00%		Q298K2              	100.00%
Bootstrap support for G3JN14 as seed ortholog is 100%.
Bootstrap support for Q298K2 as seed ortholog is 100%.

Group of orthologs #2061. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JDU4              	100.00%		Q29JW3              	100.00%
Bootstrap support for G3JDU4 as seed ortholog is 100%.
Bootstrap support for Q29JW3 as seed ortholog is 100%.

Group of orthologs #2062. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JL87              	100.00%		Q29C23              	100.00%
Bootstrap support for G3JL87 as seed ortholog is 100%.
Bootstrap support for Q29C23 as seed ortholog is 100%.

Group of orthologs #2063. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JQA0              	100.00%		Q29BZ0              	100.00%
Bootstrap support for G3JQA0 as seed ortholog is 100%.
Bootstrap support for Q29BZ0 as seed ortholog is 100%.

Group of orthologs #2064. Best score 52 bits
Score difference with first non-orthologous sequence - C.militaris:52 D.pseudoobscura:52

G3JG97              	100.00%		Q2M161              	100.00%
Bootstrap support for G3JG97 as seed ortholog is 100%.
Bootstrap support for Q2M161 as seed ortholog is 100%.

Group of orthologs #2065. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:51

G3JCU2              	100.00%		Q29EH5              	100.00%
G3JJK7              	9.60%		
G3JHK1              	8.98%		
Bootstrap support for G3JCU2 as seed ortholog is 100%.
Bootstrap support for Q29EH5 as seed ortholog is 100%.

Group of orthologs #2066. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:51

G3JNP7              	100.00%		Q28YL6              	100.00%
Bootstrap support for G3JNP7 as seed ortholog is 100%.
Bootstrap support for Q28YL6 as seed ortholog is 100%.

Group of orthologs #2067. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:51

G3J763              	100.00%		Q2LYM8              	100.00%
Bootstrap support for G3J763 as seed ortholog is 100%.
Bootstrap support for Q2LYM8 as seed ortholog is 100%.

Group of orthologs #2068. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:51

G3J6X8              	100.00%		Q3MQ15              	100.00%
Bootstrap support for G3J6X8 as seed ortholog is 100%.
Bootstrap support for Q3MQ15 as seed ortholog is 100%.

Group of orthologs #2069. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:51

G3JFX8              	100.00%		Q29KL1              	100.00%
Bootstrap support for G3JFX8 as seed ortholog is 100%.
Bootstrap support for Q29KL1 as seed ortholog is 100%.

Group of orthologs #2070. Best score 51 bits
Score difference with first non-orthologous sequence - C.militaris:51 D.pseudoobscura:51

G3JKS7              	100.00%		Q29K59              	100.00%
Bootstrap support for G3JKS7 as seed ortholog is 100%.
Bootstrap support for Q29K59 as seed ortholog is 100%.

Group of orthologs #2071. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3JPZ3              	100.00%		Q291K7              	100.00%
G3J534              	64.88%		B5DJ82              	17.53%
                    	       		B5DJ99              	15.50%
                    	       		B5DJ81              	13.28%
                    	       		B5DKC8              	13.10%
                    	       		B5DXY7              	12.55%
                    	       		Q29NL0              	11.81%
                    	       		B5DKD0              	10.89%
                    	       		I5APB0              	10.33%
                    	       		Q29C74              	8.49%
                    	       		Q29IY4              	8.12%
                    	       		I5AMP2              	7.56%
                    	       		Q28XZ6              	5.90%
Bootstrap support for G3JPZ3 as seed ortholog is 100%.
Bootstrap support for Q291K7 as seed ortholog is 100%.

Group of orthologs #2072. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3JRL3              	100.00%		Q29K25              	100.00%
G3JPE0              	11.07%		
G3JT01              	8.93%		
G3J879              	8.16%		
Bootstrap support for G3JRL3 as seed ortholog is 100%.
Bootstrap support for Q29K25 as seed ortholog is 100%.

Group of orthologs #2073. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3JIL3              	100.00%		Q294Y7              	100.00%
                    	       		B5DHA5              	5.23%
Bootstrap support for G3JIL3 as seed ortholog is 100%.
Bootstrap support for Q294Y7 as seed ortholog is 100%.

Group of orthologs #2074. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3J3L2              	100.00%		Q28WR4              	100.00%
Bootstrap support for G3J3L2 as seed ortholog is 100%.
Bootstrap support for Q28WR4 as seed ortholog is 100%.

Group of orthologs #2075. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3JN08              	100.00%		B5DVV5              	100.00%
Bootstrap support for G3JN08 as seed ortholog is 100%.
Bootstrap support for B5DVV5 as seed ortholog is 100%.

Group of orthologs #2076. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3JGC6              	100.00%		Q29EG4              	100.00%
Bootstrap support for G3JGC6 as seed ortholog is 100%.
Bootstrap support for Q29EG4 as seed ortholog is 100%.

Group of orthologs #2077. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:50

G3J8Q4              	100.00%		Q2LZ91              	100.00%
Bootstrap support for G3J8Q4 as seed ortholog is 100%.
Bootstrap support for Q2LZ91 as seed ortholog is 100%.

Group of orthologs #2078. Best score 50 bits
Score difference with first non-orthologous sequence - C.militaris:50 D.pseudoobscura:1

G3JN50              	100.00%		Q29P64              	100.00%
Bootstrap support for G3JN50 as seed ortholog is 100%.
Bootstrap support for Q29P64 as seed ortholog is 49%.
Alternative seed ortholog is Q29NF4 (1 bits away from this cluster)

Group of orthologs #2079. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3JCR3              	100.00%		Q28WN4              	100.00%
                    	       		Q8I1C0              	5.18%
Bootstrap support for G3JCR3 as seed ortholog is 100%.
Bootstrap support for Q28WN4 as seed ortholog is 100%.

Group of orthologs #2080. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3JI58              	100.00%		B5DL77              	100.00%
Bootstrap support for G3JI58 as seed ortholog is 100%.
Bootstrap support for B5DL77 as seed ortholog is 100%.

Group of orthologs #2081. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3J739              	100.00%		B5DYC9              	100.00%
Bootstrap support for G3J739 as seed ortholog is 100%.
Bootstrap support for B5DYC9 as seed ortholog is 100%.

Group of orthologs #2082. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3J3B9              	100.00%		Q29DA2              	100.00%
Bootstrap support for G3J3B9 as seed ortholog is 100%.
Bootstrap support for Q29DA2 as seed ortholog is 100%.

Group of orthologs #2083. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3J626              	100.00%		Q29KM5              	100.00%
Bootstrap support for G3J626 as seed ortholog is 100%.
Bootstrap support for Q29KM5 as seed ortholog is 100%.

Group of orthologs #2084. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3JMS4              	100.00%		Q28ZE3              	100.00%
Bootstrap support for G3JMS4 as seed ortholog is 100%.
Bootstrap support for Q28ZE3 as seed ortholog is 100%.

Group of orthologs #2085. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3JNU5              	100.00%		Q29KK7              	100.00%
Bootstrap support for G3JNU5 as seed ortholog is 100%.
Bootstrap support for Q29KK7 as seed ortholog is 100%.

Group of orthologs #2086. Best score 49 bits
Score difference with first non-orthologous sequence - C.militaris:49 D.pseudoobscura:49

G3JJ89              	100.00%		Q2LZN4              	100.00%
Bootstrap support for G3JJ89 as seed ortholog is 100%.
Bootstrap support for Q2LZN4 as seed ortholog is 100%.

Group of orthologs #2087. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:48

G3J806              	100.00%		Q29JH7              	100.00%
G3JMB5              	22.13%		
Bootstrap support for G3J806 as seed ortholog is 100%.
Bootstrap support for Q29JH7 as seed ortholog is 100%.

Group of orthologs #2088. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:48

G3J5Z2              	100.00%		Q294V7              	100.00%
Bootstrap support for G3J5Z2 as seed ortholog is 100%.
Bootstrap support for Q294V7 as seed ortholog is 100%.

Group of orthologs #2089. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:48

G3J7S9              	100.00%		Q29FT7              	100.00%
Bootstrap support for G3J7S9 as seed ortholog is 100%.
Bootstrap support for Q29FT7 as seed ortholog is 100%.

Group of orthologs #2090. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:48

G3JR22              	100.00%		B5E1D3              	100.00%
Bootstrap support for G3JR22 as seed ortholog is 100%.
Bootstrap support for B5E1D3 as seed ortholog is 100%.

Group of orthologs #2091. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:48

G3JFT7              	100.00%		Q29K01              	100.00%
Bootstrap support for G3JFT7 as seed ortholog is 100%.
Bootstrap support for Q29K01 as seed ortholog is 100%.

Group of orthologs #2092. Best score 48 bits
Score difference with first non-orthologous sequence - C.militaris:48 D.pseudoobscura:48

G3JM77              	100.00%		Q29PP9              	100.00%
Bootstrap support for G3JM77 as seed ortholog is 100%.
Bootstrap support for Q29PP9 as seed ortholog is 100%.

Group of orthologs #2093. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:47

G3J9C6              	100.00%		Q293Y6              	100.00%
G3JSW1              	23.51%		B5DWZ4              	53.44%
G3JSW3              	22.11%		Q293Z2              	45.19%
                    	       		Q293Y5              	41.16%
                    	       		B5DWZ3              	39.59%
                    	       		Q293Y8              	38.02%
                    	       		Q293Z0              	36.44%
                    	       		Q293Y9              	35.66%
                    	       		Q293Y4              	30.65%
                    	       		Q293Y3              	30.55%
                    	       		Q29BQ1              	28.88%
                    	       		B5DKD8              	22.79%
                    	       		B5DI74              	22.40%
                    	       		Q29MG4              	21.81%
                    	       		B5DKD9              	21.71%
                    	       		Q29JM8              	20.83%
                    	       		Q29MG5              	20.53%
                    	       		Q29MU6              	20.14%
                    	       		Q29MG6              	19.65%
                    	       		B5E0W3              	18.86%
                    	       		Q29MU5              	18.86%
                    	       		Q29DJ0              	15.62%
                    	       		Q29MD6              	15.32%
                    	       		B5DHV9              	13.56%
                    	       		B5DUM2              	10.12%
                    	       		Q2LZW3              	8.55%
Bootstrap support for G3J9C6 as seed ortholog is 100%.
Bootstrap support for Q293Y6 as seed ortholog is 100%.

Group of orthologs #2094. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:47

G3JSH1              	100.00%		Q29DC8              	100.00%
G3JK68              	35.10%		
Bootstrap support for G3JSH1 as seed ortholog is 100%.
Bootstrap support for Q29DC8 as seed ortholog is 100%.

Group of orthologs #2095. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:47

G3J364              	100.00%		B5DJI9              	100.00%
Bootstrap support for G3J364 as seed ortholog is 100%.
Bootstrap support for B5DJI9 as seed ortholog is 100%.

Group of orthologs #2096. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:47

G3JEJ9              	100.00%		B5DUR2              	100.00%
Bootstrap support for G3JEJ9 as seed ortholog is 100%.
Bootstrap support for B5DUR2 as seed ortholog is 100%.

Group of orthologs #2097. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:47

G3J951              	100.00%		Q299L3              	100.00%
Bootstrap support for G3J951 as seed ortholog is 100%.
Bootstrap support for Q299L3 as seed ortholog is 100%.

Group of orthologs #2098. Best score 47 bits
Score difference with first non-orthologous sequence - C.militaris:47 D.pseudoobscura:47

G3J6X3              	100.00%		Q29L93              	100.00%
Bootstrap support for G3J6X3 as seed ortholog is 100%.
Bootstrap support for Q29L93 as seed ortholog is 100%.

Group of orthologs #2099. Best score 46 bits
Score difference with first non-orthologous sequence - C.militaris:46 D.pseudoobscura:46

G3J7Y7              	100.00%		Q296E4              	100.00%
Bootstrap support for G3J7Y7 as seed ortholog is 100%.
Bootstrap support for Q296E4 as seed ortholog is 100%.

Group of orthologs #2100. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 D.pseudoobscura:45

G3JAB1              	100.00%		I7KLG7              	100.00%
                    	       		I7M6Y7              	40.00%
Bootstrap support for G3JAB1 as seed ortholog is 100%.
Bootstrap support for I7KLG7 as seed ortholog is 100%.

Group of orthologs #2101. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 D.pseudoobscura:45

G3JN07              	100.00%		B5E126              	100.00%
Bootstrap support for G3JN07 as seed ortholog is 100%.
Bootstrap support for B5E126 as seed ortholog is 100%.

Group of orthologs #2102. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 D.pseudoobscura:45

G3JL48              	100.00%		Q29DA6              	100.00%
Bootstrap support for G3JL48 as seed ortholog is 100%.
Bootstrap support for Q29DA6 as seed ortholog is 100%.

Group of orthologs #2103. Best score 45 bits
Score difference with first non-orthologous sequence - C.militaris:45 D.pseudoobscura:45

G3JPI4              	100.00%		Q29ED6              	100.00%
Bootstrap support for G3JPI4 as seed ortholog is 100%.
Bootstrap support for Q29ED6 as seed ortholog is 100%.

Group of orthologs #2104. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:44

G3JR97              	100.00%		Q296V0              	100.00%
                    	       		Q294M8              	24.03%
                    	       		Q294M7              	20.53%
                    	       		Q294M9              	18.96%
                    	       		I5APR8              	17.87%
                    	       		Q294M5              	17.63%
                    	       		Q294M1              	15.46%
                    	       		Q294M6              	15.10%
                    	       		B5DWY4              	14.86%
                    	       		Q294M3              	11.71%
                    	       		Q293Z7              	11.35%
                    	       		Q29EU1              	9.54%
                    	       		Q294M4              	7.49%
Bootstrap support for G3JR97 as seed ortholog is 100%.
Bootstrap support for Q296V0 as seed ortholog is 100%.

Group of orthologs #2105. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:44

G3JHZ0              	100.00%		Q292Z3              	100.00%
G3JGA1              	20.83%		Q29PI3              	45.95%
G3JFM5              	12.31%		
G3JTQ8              	10.30%		
G3JFE9              	10.06%		
G3J3P4              	8.99%		
G3JPG3              	8.88%		
Bootstrap support for G3JHZ0 as seed ortholog is 100%.
Bootstrap support for Q292Z3 as seed ortholog is 100%.

Group of orthologs #2106. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:44

G3JTR0              	100.00%		B5E0D0              	100.00%
                    	       		Q28Y07              	76.06%
                    	       		B5DND4              	38.50%
                    	       		Q29G02              	24.18%
Bootstrap support for G3JTR0 as seed ortholog is 100%.
Bootstrap support for B5E0D0 as seed ortholog is 100%.

Group of orthologs #2107. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:44

G3JAQ9              	100.00%		Q29KU8              	100.00%
                    	       		Q29KU5              	24.09%
                    	       		B5DJP0              	6.38%
Bootstrap support for G3JAQ9 as seed ortholog is 100%.
Bootstrap support for Q29KU8 as seed ortholog is 100%.

Group of orthologs #2108. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:44

G3J5N2              	100.00%		Q29EM4              	100.00%
Bootstrap support for G3J5N2 as seed ortholog is 100%.
Bootstrap support for Q29EM4 as seed ortholog is 100%.

Group of orthologs #2109. Best score 44 bits
Score difference with first non-orthologous sequence - C.militaris:44 D.pseudoobscura:44

G3J7W6              	100.00%		Q29KE3              	100.00%
Bootstrap support for G3J7W6 as seed ortholog is 100%.
Bootstrap support for Q29KE3 as seed ortholog is 100%.

Group of orthologs #2110. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:43

G3JJX5              	100.00%		Q29KG1              	100.00%
                    	       		B5DH97              	16.07%
                    	       		B5DNR8              	12.95%
Bootstrap support for G3JJX5 as seed ortholog is 100%.
Bootstrap support for Q29KG1 as seed ortholog is 100%.

Group of orthologs #2111. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:43

G3JTM5              	100.00%		Q28YY4              	100.00%
Bootstrap support for G3JTM5 as seed ortholog is 100%.
Bootstrap support for Q28YY4 as seed ortholog is 100%.

Group of orthologs #2112. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:43

G3JM67              	100.00%		Q29I73              	100.00%
Bootstrap support for G3JM67 as seed ortholog is 100%.
Bootstrap support for Q29I73 as seed ortholog is 100%.

Group of orthologs #2113. Best score 43 bits
Score difference with first non-orthologous sequence - C.militaris:43 D.pseudoobscura:43

G3JN94              	100.00%		Q29NX0              	100.00%
Bootstrap support for G3JN94 as seed ortholog is 100%.
Bootstrap support for Q29NX0 as seed ortholog is 100%.

Group of orthologs #2114. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 D.pseudoobscura:42

G3JPS0              	100.00%		B5DWB1              	100.00%
                    	       		B5DP04              	85.47%
                    	       		Q29KJ6              	31.91%
Bootstrap support for G3JPS0 as seed ortholog is 100%.
Bootstrap support for B5DWB1 as seed ortholog is 100%.

Group of orthologs #2115. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 D.pseudoobscura:42

G3JDP5              	100.00%		Q29LX4              	100.00%
                    	       		B5DHW6              	15.09%
Bootstrap support for G3JDP5 as seed ortholog is 100%.
Bootstrap support for Q29LX4 as seed ortholog is 100%.

Group of orthologs #2116. Best score 42 bits
Score difference with first non-orthologous sequence - C.militaris:42 D.pseudoobscura:42

G3J5D2              	100.00%		Q294W1              	100.00%
Bootstrap support for G3J5D2 as seed ortholog is 100%.
Bootstrap support for Q294W1 as seed ortholog is 100%.

Group of orthologs #2117. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 D.pseudoobscura:41

G3J6T8              	100.00%		B5DMY3              	100.00%
Bootstrap support for G3J6T8 as seed ortholog is 100%.
Bootstrap support for B5DMY3 as seed ortholog is 100%.

Group of orthologs #2118. Best score 41 bits
Score difference with first non-orthologous sequence - C.militaris:41 D.pseudoobscura:41

G3J3H1              	100.00%		Q29II9              	100.00%
Bootstrap support for G3J3H1 as seed ortholog is 100%.
Bootstrap support for Q29II9 as seed ortholog is 100%.