###################################
166 groups of orthologs
285 in-paralogs from C.japonica
172 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 699 bits
Score difference with first non-orthologous sequence - C.japonica:133 C.trachomatis:650

H2VRY7              	100.00%		P17821              	100.00%
Bootstrap support for H2VRY7 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #2. Best score 657 bits
Score difference with first non-orthologous sequence - C.japonica:657 C.trachomatis:657

H2VR40              	100.00%		O84250              	100.00%
Bootstrap support for H2VR40 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 571 bits
Score difference with first non-orthologous sequence - C.japonica:411 C.trachomatis:571

H2WRF4              	100.00%		O84716              	100.00%
H2VPD6              	55.61%		
Bootstrap support for H2WRF4 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #4. Best score 523 bits
Score difference with first non-orthologous sequence - C.japonica:436 C.trachomatis:341

H2VRM4              	100.00%		P0C0Z7              	100.00%
Bootstrap support for H2VRM4 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #5. Best score 512 bits
Score difference with first non-orthologous sequence - C.japonica:512 C.trachomatis:512

H2WM83              	100.00%		O84057              	100.00%
H2VW16              	5.68%		
Bootstrap support for H2WM83 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #6. Best score 511 bits
Score difference with first non-orthologous sequence - C.japonica:511 C.trachomatis:333

H2VK29              	100.00%		O84304              	100.00%
Bootstrap support for H2VK29 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #7. Best score 496 bits
Score difference with first non-orthologous sequence - C.japonica:192 C.trachomatis:496

H2WCF4              	100.00%		O84444              	100.00%
Bootstrap support for H2WCF4 as seed ortholog is 99%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #8. Best score 489 bits
Score difference with first non-orthologous sequence - C.japonica:489 C.trachomatis:489

H2VU08              	100.00%		O84863              	100.00%
Bootstrap support for H2VU08 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #9. Best score 473 bits
Score difference with first non-orthologous sequence - C.japonica:473 C.trachomatis:473

H2VWB4              	100.00%		O84834              	100.00%
Bootstrap support for H2VWB4 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #10. Best score 428 bits
Score difference with first non-orthologous sequence - C.japonica:52 C.trachomatis:428

K7GYL6              	100.00%		O84348              	100.00%
Bootstrap support for K7GYL6 as seed ortholog is 93%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #11. Best score 413 bits
Score difference with first non-orthologous sequence - C.japonica:357 C.trachomatis:413

H2WNQ3              	100.00%		O84126              	100.00%
H2WGI6              	5.63%		
Bootstrap support for H2WNQ3 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #12. Best score 392 bits
Score difference with first non-orthologous sequence - C.japonica:392 C.trachomatis:392

H2VJJ6              	100.00%		O84848              	100.00%
Bootstrap support for H2VJJ6 as seed ortholog is 100%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #13. Best score 388 bits
Score difference with first non-orthologous sequence - C.japonica:229 C.trachomatis:388

H2WMW3              	100.00%		P0CD71              	100.00%
Bootstrap support for H2WMW3 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #14. Best score 387 bits
Score difference with first non-orthologous sequence - C.japonica:387 C.trachomatis:387

H2VUQ8              	100.00%		O84310              	100.00%
Bootstrap support for H2VUQ8 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #15. Best score 385 bits
Score difference with first non-orthologous sequence - C.japonica:385 C.trachomatis:385

K7GX60              	100.00%		O84754              	100.00%
Bootstrap support for K7GX60 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #16. Best score 380 bits
Score difference with first non-orthologous sequence - C.japonica:242 C.trachomatis:380

K7GVL3              	100.00%		O84067              	100.00%
Bootstrap support for K7GVL3 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #17. Best score 368 bits
Score difference with first non-orthologous sequence - C.japonica:368 C.trachomatis:368

H2W7I0              	100.00%		Q59321              	100.00%
Bootstrap support for H2W7I0 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #18. Best score 366 bits
Score difference with first non-orthologous sequence - C.japonica:366 C.trachomatis:366

H2VH42              	100.00%		O84585              	100.00%
Bootstrap support for H2VH42 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #19. Best score 363 bits
Score difference with first non-orthologous sequence - C.japonica:363 C.trachomatis:363

H2WB97              	100.00%		P0CE13              	100.00%
H2VR89              	91.75%		
H2WL12              	77.46%		
H2WGL3              	77.14%		
Bootstrap support for H2WB97 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #20. Best score 361 bits
Score difference with first non-orthologous sequence - C.japonica:361 C.trachomatis:361

H2W490              	100.00%		O84591              	100.00%
Bootstrap support for H2W490 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #21. Best score 340 bits
Score difference with first non-orthologous sequence - C.japonica:340 C.trachomatis:340

K7GUH8              	100.00%		O84823              	100.00%
Bootstrap support for K7GUH8 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #22. Best score 325 bits
Score difference with first non-orthologous sequence - C.japonica:325 C.trachomatis:325

K7H0F9              	100.00%		O84066              	100.00%
Bootstrap support for K7H0F9 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #23. Best score 322 bits
Score difference with first non-orthologous sequence - C.japonica:322 C.trachomatis:322

H2VXR4              	100.00%		P0CD78              	100.00%
Bootstrap support for H2VXR4 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #24. Best score 319 bits
Score difference with first non-orthologous sequence - C.japonica:180 C.trachomatis:319

K7H6L6              	100.00%		O84546              	100.00%
Bootstrap support for K7H6L6 as seed ortholog is 99%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #25. Best score 315 bits
Score difference with first non-orthologous sequence - C.japonica:315 C.trachomatis:315

K7GVE7              	100.00%		O84829              	100.00%
H2WKC3              	50.73%		
Bootstrap support for K7GVE7 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #26. Best score 314 bits
Score difference with first non-orthologous sequence - C.japonica:314 C.trachomatis:314

H2VZF2              	100.00%		O84248              	100.00%
Bootstrap support for H2VZF2 as seed ortholog is 100%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #27. Best score 309 bits
Score difference with first non-orthologous sequence - C.japonica:146 C.trachomatis:239

H2WPW4              	100.00%		O84561              	100.00%
Bootstrap support for H2WPW4 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #28. Best score 308 bits
Score difference with first non-orthologous sequence - C.japonica:308 C.trachomatis:308

K7HCA1              	100.00%		P0CE09              	100.00%
H2WW66              	15.82%		
H2W645              	5.24%		
Bootstrap support for K7HCA1 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #29. Best score 298 bits
Score difference with first non-orthologous sequence - C.japonica:239 C.trachomatis:298

H2VYQ6              	100.00%		O84786              	100.00%
Bootstrap support for H2VYQ6 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #30. Best score 296 bits
Score difference with first non-orthologous sequence - C.japonica:296 C.trachomatis:296

H2WKA2              	100.00%		O84315              	100.00%
Bootstrap support for H2WKA2 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #31. Best score 295 bits
Score difference with first non-orthologous sequence - C.japonica:295 C.trachomatis:295

K7H0A6              	100.00%		O84711              	100.00%
Bootstrap support for K7H0A6 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #32. Best score 292 bits
Score difference with first non-orthologous sequence - C.japonica:292 C.trachomatis:292

H2WP86              	100.00%		P0CE21              	100.00%
H2WFI4              	44.84%		
Bootstrap support for H2WP86 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #33. Best score 283 bits
Score difference with first non-orthologous sequence - C.japonica:283 C.trachomatis:283

K7GXQ7              	100.00%		O84849              	100.00%
Bootstrap support for K7GXQ7 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #34. Best score 271 bits
Score difference with first non-orthologous sequence - C.japonica:271 C.trachomatis:271

H2W4W2              	100.00%		O84439              	100.00%
Bootstrap support for H2W4W2 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #35. Best score 265 bits
Score difference with first non-orthologous sequence - C.japonica:159 C.trachomatis:265

K7H6I1              	100.00%		O84352              	100.00%
H2VMI2              	12.08%		
Bootstrap support for K7H6I1 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #36. Best score 264 bits
Score difference with first non-orthologous sequence - C.japonica:114 C.trachomatis:114

H2WE11              	100.00%		O84249              	100.00%
Bootstrap support for H2WE11 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 99%.

Group of orthologs #37. Best score 263 bits
Score difference with first non-orthologous sequence - C.japonica:141 C.trachomatis:263

K7HC26              	100.00%		O84006              	100.00%
H2WAD6              	32.22%		
Bootstrap support for K7HC26 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #38. Best score 261 bits
Score difference with first non-orthologous sequence - C.japonica:261 C.trachomatis:261

H2WQU2              	100.00%		O84094              	100.00%
Bootstrap support for H2WQU2 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #39. Best score 260 bits
Score difference with first non-orthologous sequence - C.japonica:105 C.trachomatis:260

H2VKI1              	100.00%		O84698              	100.00%
H2VPV7              	32.98%		
H2WDB8              	17.15%		
H2VV89              	7.33%		
Bootstrap support for H2VKI1 as seed ortholog is 99%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #40. Best score 257 bits
Score difference with first non-orthologous sequence - C.japonica:77 C.trachomatis:257

H2W6J4              	100.00%		O84828              	100.00%
Bootstrap support for H2W6J4 as seed ortholog is 99%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #41. Best score 254 bits
Score difference with first non-orthologous sequence - C.japonica:180 C.trachomatis:254

H2VJT5              	100.00%		O84309              	100.00%
H2VP51              	82.12%		
Bootstrap support for H2VJT5 as seed ortholog is 99%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #42. Best score 253 bits
Score difference with first non-orthologous sequence - C.japonica:253 C.trachomatis:253

H2WMC1              	100.00%		P0CD72              	100.00%
Bootstrap support for H2WMC1 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #43. Best score 250 bits
Score difference with first non-orthologous sequence - C.japonica:250 C.trachomatis:250

H2VQC4              	100.00%		O84316              	100.00%
K7GY35              	6.44%		
Bootstrap support for H2VQC4 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #44. Best score 247 bits
Score difference with first non-orthologous sequence - C.japonica:109 C.trachomatis:88

H2W7P3              	100.00%		O84058              	100.00%
Bootstrap support for H2W7P3 as seed ortholog is 99%.
Bootstrap support for O84058 as seed ortholog is 98%.

Group of orthologs #45. Best score 245 bits
Score difference with first non-orthologous sequence - C.japonica:245 C.trachomatis:245

H2VZV0              	100.00%		O84451              	100.00%
Bootstrap support for H2VZV0 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #46. Best score 236 bits
Score difference with first non-orthologous sequence - C.japonica:236 C.trachomatis:236

H2VZJ0              	100.00%		O84296              	100.00%
Bootstrap support for H2VZJ0 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #47. Best score 232 bits
Score difference with first non-orthologous sequence - C.japonica:232 C.trachomatis:232

H2VQU9              	100.00%		O84642              	100.00%
H2W1L8              	59.31%		
H2W9W6              	21.25%		
Bootstrap support for H2VQU9 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #48. Best score 228 bits
Score difference with first non-orthologous sequence - C.japonica:228 C.trachomatis:228

H2VR55              	100.00%		O84381              	100.00%
Bootstrap support for H2VR55 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #49. Best score 222 bits
Score difference with first non-orthologous sequence - C.japonica:222 C.trachomatis:222

H2W805              	100.00%		O84562              	100.00%
Bootstrap support for H2W805 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #50. Best score 217 bits
Score difference with first non-orthologous sequence - C.japonica:217 C.trachomatis:217

H2WEP1              	100.00%		O84775              	100.00%
Bootstrap support for H2WEP1 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #51. Best score 213 bits
Score difference with first non-orthologous sequence - C.japonica:41 C.trachomatis:213

H2WBB0              	100.00%		O84345              	100.00%
Bootstrap support for H2WBB0 as seed ortholog is 86%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #52. Best score 213 bits
Score difference with first non-orthologous sequence - C.japonica:213 C.trachomatis:98

H2WDG3              	100.00%		O84028              	100.00%
Bootstrap support for H2WDG3 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 99%.

Group of orthologs #53. Best score 211 bits
Score difference with first non-orthologous sequence - C.japonica:211 C.trachomatis:211

H2W7K0              	100.00%		O84797              	100.00%
Bootstrap support for H2W7K0 as seed ortholog is 100%.
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #54. Best score 207 bits
Score difference with first non-orthologous sequence - C.japonica:207 C.trachomatis:207

H2W315              	100.00%		O84596              	100.00%
H2X0Y2              	79.40%		
Bootstrap support for H2W315 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #55. Best score 207 bits
Score difference with first non-orthologous sequence - C.japonica:118 C.trachomatis:207

K7GYN4              	100.00%		P36431              	100.00%
Bootstrap support for K7GYN4 as seed ortholog is 99%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #56. Best score 202 bits
Score difference with first non-orthologous sequence - C.japonica:202 C.trachomatis:202

H2VZD9              	100.00%		O84188              	100.00%
Bootstrap support for H2VZD9 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #57. Best score 201 bits
Score difference with first non-orthologous sequence - C.japonica:201 C.trachomatis:201

K7H6A7              	100.00%		O84065              	100.00%
Bootstrap support for K7H6A7 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #58. Best score 196 bits
Score difference with first non-orthologous sequence - C.japonica:87 C.trachomatis:110

K7II35              	100.00%		O84406              	100.00%
H2WIM0              	44.58%		
K7IGG6              	38.64%		
K7GZE9              	31.12%		
H2W8D4              	22.90%		
H2WQR8              	16.96%		
Bootstrap support for K7II35 as seed ortholog is 97%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #59. Best score 196 bits
Score difference with first non-orthologous sequence - C.japonica:43 C.trachomatis:196

H2VPJ7              	100.00%		O84732              	100.00%
Bootstrap support for H2VPJ7 as seed ortholog is 84%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #60. Best score 194 bits
Score difference with first non-orthologous sequence - C.japonica:194 C.trachomatis:194

K7GTN6              	100.00%		O84266              	100.00%
H2VNP9              	41.29%		
Bootstrap support for K7GTN6 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #61. Best score 191 bits
Score difference with first non-orthologous sequence - C.japonica:191 C.trachomatis:191

H2WJ11              	100.00%		O84332              	100.00%
Bootstrap support for H2WJ11 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #62. Best score 186 bits
Score difference with first non-orthologous sequence - C.japonica:186 C.trachomatis:186

H2VZD6              	100.00%		O84812              	100.00%
Bootstrap support for H2VZD6 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #63. Best score 183 bits
Score difference with first non-orthologous sequence - C.japonica:183 C.trachomatis:183

H2WMK4              	100.00%		O84613              	100.00%
Bootstrap support for H2WMK4 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #64. Best score 179 bits
Score difference with first non-orthologous sequence - C.japonica:179 C.trachomatis:179

H2WET9              	100.00%		O84608              	100.00%
H2VM05              	32.88%		
Bootstrap support for H2WET9 as seed ortholog is 100%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #65. Best score 179 bits
Score difference with first non-orthologous sequence - C.japonica:179 C.trachomatis:50

H2WDI3              	100.00%		O84026              	100.00%
Bootstrap support for H2WDI3 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 93%.

Group of orthologs #66. Best score 177 bits
Score difference with first non-orthologous sequence - C.japonica:177 C.trachomatis:177

K7IEB9              	100.00%		O84081              	100.00%
Bootstrap support for K7IEB9 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #67. Best score 173 bits
Score difference with first non-orthologous sequence - C.japonica:18 C.trachomatis:173

H2WLS9              	100.00%		O84423              	100.00%
Bootstrap support for H2WLS9 as seed ortholog is 12%.
Alternative seed ortholog is K7H5D3 (18 bits away from this cluster)
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #68. Best score 170 bits
Score difference with first non-orthologous sequence - C.japonica:74 C.trachomatis:170

H2W723              	100.00%		O84247              	100.00%
Bootstrap support for H2W723 as seed ortholog is 98%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #69. Best score 166 bits
Score difference with first non-orthologous sequence - C.japonica:166 C.trachomatis:166

K7I2R9              	100.00%		O84007              	100.00%
Bootstrap support for K7I2R9 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #70. Best score 165 bits
Score difference with first non-orthologous sequence - C.japonica:6 C.trachomatis:165

K7HUA8              	100.00%		O84297              	100.00%
Bootstrap support for K7HUA8 as seed ortholog is 57%.
Alternative seed ortholog is K7GVZ1 (6 bits away from this cluster)
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #71. Best score 163 bits
Score difference with first non-orthologous sequence - C.japonica:27 C.trachomatis:163

H2WJ19              	100.00%		O84676              	100.00%
                    	       		O84722              	12.46%
Bootstrap support for H2WJ19 as seed ortholog is 75%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #72. Best score 153 bits
Score difference with first non-orthologous sequence - C.japonica:28 C.trachomatis:153

H2VP67              	100.00%		O84734              	100.00%
Bootstrap support for H2VP67 as seed ortholog is 81%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #73. Best score 149 bits
Score difference with first non-orthologous sequence - C.japonica:100 C.trachomatis:149

H2VWV0              	100.00%		O84234              	100.00%
K7GUS3              	83.33%		
H2WMN1              	81.06%		
H2WBX5              	41.75%		
H2VWN3              	12.96%		
H2W061              	10.69%		
H2VGN5              	10.61%		
Bootstrap support for H2VWV0 as seed ortholog is 97%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #74. Best score 149 bits
Score difference with first non-orthologous sequence - C.japonica:149 C.trachomatis:149

H2WIA5              	100.00%		O84123              	100.00%
Bootstrap support for H2WIA5 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #75. Best score 149 bits
Score difference with first non-orthologous sequence - C.japonica:149 C.trachomatis:149

K7IFN4              	100.00%		O84456              	100.00%
Bootstrap support for K7IFN4 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #76. Best score 144 bits
Score difference with first non-orthologous sequence - C.japonica:144 C.trachomatis:144

H2WFL9              	100.00%		O84196              	100.00%
Bootstrap support for H2WFL9 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #77. Best score 142 bits
Score difference with first non-orthologous sequence - C.japonica:41 C.trachomatis:142

H2W384              	100.00%		O84200              	100.00%
Bootstrap support for H2W384 as seed ortholog is 86%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #78. Best score 139 bits
Score difference with first non-orthologous sequence - C.japonica:139 C.trachomatis:139

H2W3M7              	100.00%		O84193              	100.00%
H2WBZ3              	36.69%		O84668              	8.14%
Bootstrap support for H2W3M7 as seed ortholog is 100%.
Bootstrap support for O84193 as seed ortholog is 100%.

Group of orthologs #79. Best score 139 bits
Score difference with first non-orthologous sequence - C.japonica:139 C.trachomatis:139

H2X6B1              	100.00%		O84035              	100.00%
Bootstrap support for H2X6B1 as seed ortholog is 100%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #80. Best score 133 bits
Score difference with first non-orthologous sequence - C.japonica:133 C.trachomatis:133

H2W081              	100.00%		O84835              	100.00%
Bootstrap support for H2W081 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #81. Best score 132 bits
Score difference with first non-orthologous sequence - C.japonica:50 C.trachomatis:132

H2VMP1              	100.00%		O84864              	100.00%
H2WLE8              	17.82%		
K7H5S2              	13.21%		
K7GZU9              	12.97%		
K7H7L9              	6.42%		
Bootstrap support for H2VMP1 as seed ortholog is 84%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #82. Best score 131 bits
Score difference with first non-orthologous sequence - C.japonica:131 C.trachomatis:37

H2VNV3              	100.00%		O84260              	100.00%
Bootstrap support for H2VNV3 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 84%.

Group of orthologs #83. Best score 131 bits
Score difference with first non-orthologous sequence - C.japonica:131 C.trachomatis:131

H2WE23              	100.00%		O84649              	100.00%
Bootstrap support for H2WE23 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #84. Best score 124 bits
Score difference with first non-orthologous sequence - C.japonica:124 C.trachomatis:124

H2W0C1              	100.00%		O84704              	100.00%
Bootstrap support for H2W0C1 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #85. Best score 123 bits
Score difference with first non-orthologous sequence - C.japonica:2 C.trachomatis:79

H2WM18              	100.00%		P38004              	100.00%
H2W6J1              	26.72%		
K7I9S4              	11.38%		
Bootstrap support for H2WM18 as seed ortholog is 53%.
Alternative seed ortholog is H2VYQ7 (2 bits away from this cluster)
Bootstrap support for P38004 as seed ortholog is 98%.

Group of orthologs #86. Best score 117 bits
Score difference with first non-orthologous sequence - C.japonica:117 C.trachomatis:117

H2WAP3              	100.00%		O84049              	100.00%
Bootstrap support for H2WAP3 as seed ortholog is 100%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #87. Best score 116 bits
Score difference with first non-orthologous sequence - C.japonica:116 C.trachomatis:116

H2VXF9              	100.00%		O84720              	100.00%
Bootstrap support for H2VXF9 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #88. Best score 113 bits
Score difference with first non-orthologous sequence - C.japonica:19 C.trachomatis:113

H2WMJ5              	100.00%		O84358              	100.00%
Bootstrap support for H2WMJ5 as seed ortholog is 74%.
Alternative seed ortholog is H2WLM4 (19 bits away from this cluster)
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #89. Best score 112 bits
Score difference with first non-orthologous sequence - C.japonica:112 C.trachomatis:112

H2W8M4              	100.00%		O84508              	100.00%
Bootstrap support for H2W8M4 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #90. Best score 112 bits
Score difference with first non-orthologous sequence - C.japonica:112 C.trachomatis:112

H2WIS9              	100.00%		O84435              	100.00%
Bootstrap support for H2WIS9 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #91. Best score 111 bits
Score difference with first non-orthologous sequence - C.japonica:111 C.trachomatis:111

H2WIJ9              	100.00%		O84712              	100.00%
                    	       		P38002              	6.32%
Bootstrap support for H2WIJ9 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 100%.

Group of orthologs #92. Best score 111 bits
Score difference with first non-orthologous sequence - C.japonica:111 C.trachomatis:111

K7H4Y8              	100.00%		O84460              	100.00%
Bootstrap support for K7H4Y8 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #93. Best score 109 bits
Score difference with first non-orthologous sequence - C.japonica:39 C.trachomatis:109

H2XFI0              	100.00%		O84130              	100.00%
Bootstrap support for H2XFI0 as seed ortholog is 87%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #94. Best score 108 bits
Score difference with first non-orthologous sequence - C.japonica:2 C.trachomatis:108

H2VQA5              	100.00%		O84548              	100.00%
H2VUN8              	47.66%		
H2W6Q8              	30.90%		
Bootstrap support for H2VQA5 as seed ortholog is 45%.
Alternative seed ortholog is H2VMX1 (2 bits away from this cluster)
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #95. Best score 107 bits
Score difference with first non-orthologous sequence - C.japonica:107 C.trachomatis:107

H2WKE6              	100.00%		P55137              	100.00%
Bootstrap support for H2WKE6 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #96. Best score 106 bits
Score difference with first non-orthologous sequence - C.japonica:106 C.trachomatis:106

H2W6I7              	100.00%		O84442              	100.00%
H2VZ92              	7.03%		
Bootstrap support for H2W6I7 as seed ortholog is 100%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #97. Best score 101 bits
Score difference with first non-orthologous sequence - C.japonica:101 C.trachomatis:101

H2W573              	100.00%		O84294              	100.00%
Bootstrap support for H2W573 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #98. Best score 97 bits
Score difference with first non-orthologous sequence - C.japonica:38 C.trachomatis:25

H2VS07              	100.00%		O84154              	100.00%
K7GWL8              	41.31%		
H2W193              	29.42%		
K7ICQ4              	25.30%		
K7HWG3              	25.15%		
K7HI04              	24.54%		
H2VMF2              	10.52%		
Bootstrap support for H2VS07 as seed ortholog is 92%.
Bootstrap support for O84154 as seed ortholog is 80%.

Group of orthologs #99. Best score 97 bits
Score difference with first non-orthologous sequence - C.japonica:97 C.trachomatis:97

K7IGX9              	100.00%		O84093              	100.00%
Bootstrap support for K7IGX9 as seed ortholog is 100%.
Bootstrap support for O84093 as seed ortholog is 100%.

Group of orthologs #100. Best score 96 bits
Score difference with first non-orthologous sequence - C.japonica:96 C.trachomatis:96

H2VJ63              	100.00%		O84390              	100.00%
K7HAG7              	57.69%		
Bootstrap support for H2VJ63 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #101. Best score 96 bits
Score difference with first non-orthologous sequence - C.japonica:24 C.trachomatis:96

K7ILD6              	100.00%		O84851              	100.00%
K7HG48              	94.39%		
Bootstrap support for K7ILD6 as seed ortholog is 83%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #102. Best score 96 bits
Score difference with first non-orthologous sequence - C.japonica:16 C.trachomatis:96

H2WBH8              	100.00%		O84599              	100.00%
Bootstrap support for H2WBH8 as seed ortholog is 69%.
Alternative seed ortholog is K7HMF9 (16 bits away from this cluster)
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #103. Best score 95 bits
Score difference with first non-orthologous sequence - C.japonica:95 C.trachomatis:95

K7HVQ7              	100.00%		O84859              	100.00%
Bootstrap support for K7HVQ7 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #104. Best score 94 bits
Score difference with first non-orthologous sequence - C.japonica:94 C.trachomatis:94

H2WHT3              	100.00%		O84782              	100.00%
K7GUG0              	12.89%		
H2VMI9              	10.06%		
Bootstrap support for H2WHT3 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #105. Best score 94 bits
Score difference with first non-orthologous sequence - C.japonica:94 C.trachomatis:94

K7I6Y6              	100.00%		O84843              	100.00%
K7HSQ1              	81.87%		
Bootstrap support for K7I6Y6 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #106. Best score 94 bits
Score difference with first non-orthologous sequence - C.japonica:94 C.trachomatis:94

H2WIR8              	100.00%		O84391              	100.00%
Bootstrap support for H2WIR8 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #107. Best score 91 bits
Score difference with first non-orthologous sequence - C.japonica:44 C.trachomatis:15

H2W647              	100.00%		O84695              	100.00%
K7HM82              	30.96%		O84205              	11.50%
H2WLB3              	17.39%		
K7IAK6              	11.30%		
Bootstrap support for H2W647 as seed ortholog is 93%.
Bootstrap support for O84695 as seed ortholog is 65%.
Alternative seed ortholog is O84071 (15 bits away from this cluster)

Group of orthologs #108. Best score 91 bits
Score difference with first non-orthologous sequence - C.japonica:91 C.trachomatis:91

H2VU04              	100.00%		O84478              	100.00%
Bootstrap support for H2VU04 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #109. Best score 91 bits
Score difference with first non-orthologous sequence - C.japonica:91 C.trachomatis:91

H2WHF6              	100.00%		O84530              	100.00%
Bootstrap support for H2WHF6 as seed ortholog is 100%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #110. Best score 90 bits
Score difference with first non-orthologous sequence - C.japonica:90 C.trachomatis:90

H2WHF3              	100.00%		O84781              	100.00%
H2WR69              	27.39%		
K7I649              	20.62%		
H2WRF0              	14.44%		
H2VUN5              	10.46%		
H2W9D9              	5.18%		
Bootstrap support for H2WHF3 as seed ortholog is 100%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #111. Best score 89 bits
Score difference with first non-orthologous sequence - C.japonica:89 C.trachomatis:89

H2WK62              	100.00%		O84212              	100.00%
K7HX13              	46.45%		
H2VVC2              	5.60%		
Bootstrap support for H2WK62 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #112. Best score 88 bits
Score difference with first non-orthologous sequence - C.japonica:88 C.trachomatis:88

H2W951              	100.00%		O84578              	100.00%
Bootstrap support for H2W951 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #113. Best score 88 bits
Score difference with first non-orthologous sequence - C.japonica:88 C.trachomatis:88

K7H3F1              	100.00%		O84665              	100.00%
Bootstrap support for K7H3F1 as seed ortholog is 100%.
Bootstrap support for O84665 as seed ortholog is 100%.

Group of orthologs #114. Best score 87 bits
Score difference with first non-orthologous sequence - C.japonica:87 C.trachomatis:87

K7IEB6              	100.00%		O84719              	100.00%
K7HK26              	98.53%		
K7HFY4              	97.36%		
K7IF33              	97.36%		
H2WEN4              	42.44%		
K7I837              	26.14%		
Bootstrap support for K7IEB6 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #115. Best score 86 bits
Score difference with first non-orthologous sequence - C.japonica:43 C.trachomatis:86

H2VQA3              	100.00%		O84589              	100.00%
Bootstrap support for H2VQA3 as seed ortholog is 91%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #116. Best score 83 bits
Score difference with first non-orthologous sequence - C.japonica:32 C.trachomatis:16

H2VT68              	100.00%		O84204              	100.00%
K7I1K6              	49.50%		O84696              	22.59%
Bootstrap support for H2VT68 as seed ortholog is 82%.
Bootstrap support for O84204 as seed ortholog is 83%.

Group of orthologs #117. Best score 83 bits
Score difference with first non-orthologous sequence - C.japonica:32 C.trachomatis:83

H2VSE0              	100.00%		O84469              	100.00%
Bootstrap support for H2VSE0 as seed ortholog is 79%.
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #118. Best score 83 bits
Score difference with first non-orthologous sequence - C.japonica:83 C.trachomatis:83

K7H1V6              	100.00%		O84595              	100.00%
Bootstrap support for K7H1V6 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #119. Best score 83 bits
Score difference with first non-orthologous sequence - C.japonica:36 C.trachomatis:25

K7I039              	100.00%		O84660              	100.00%
Bootstrap support for K7I039 as seed ortholog is 90%.
Bootstrap support for O84660 as seed ortholog is 81%.

Group of orthologs #120. Best score 81 bits
Score difference with first non-orthologous sequence - C.japonica:8 C.trachomatis:81

H2W1C2              	100.00%		O84650              	100.00%
Bootstrap support for H2W1C2 as seed ortholog is 56%.
Alternative seed ortholog is H2VKZ0 (8 bits away from this cluster)
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #121. Best score 80 bits
Score difference with first non-orthologous sequence - C.japonica:80 C.trachomatis:80

H2W9T3              	100.00%		O84307              	100.00%
H2WL67              	41.43%		
K7H5B4              	38.39%		
Bootstrap support for H2W9T3 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #122. Best score 79 bits
Score difference with first non-orthologous sequence - C.japonica:79 C.trachomatis:79

H2W134              	100.00%		O84338              	100.00%
H2W9H6              	20.85%		
H2WBT1              	15.96%		
Bootstrap support for H2W134 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #123. Best score 77 bits
Score difference with first non-orthologous sequence - C.japonica:77 C.trachomatis:77

H2VYW5              	100.00%		P0CD79              	100.00%
Bootstrap support for H2VYW5 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #124. Best score 76 bits
Score difference with first non-orthologous sequence - C.japonica:31 C.trachomatis:76

H2VRD7              	100.00%		O84687              	100.00%
Bootstrap support for H2VRD7 as seed ortholog is 87%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #125. Best score 75 bits
Score difference with first non-orthologous sequence - C.japonica:75 C.trachomatis:75

H2W6N6              	100.00%		O84499              	100.00%
Bootstrap support for H2W6N6 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #126. Best score 74 bits
Score difference with first non-orthologous sequence - C.japonica:74 C.trachomatis:74

H2WF41              	100.00%		O84321              	100.00%
K7I2H2              	38.22%		
Bootstrap support for H2WF41 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #127. Best score 74 bits
Score difference with first non-orthologous sequence - C.japonica:74 C.trachomatis:74

H2VWY6              	100.00%		O84139              	100.00%
Bootstrap support for H2VWY6 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #128. Best score 74 bits
Score difference with first non-orthologous sequence - C.japonica:74 C.trachomatis:74

H2WN26              	100.00%		O84686              	100.00%
Bootstrap support for H2WN26 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #129. Best score 74 bits
Score difference with first non-orthologous sequence - C.japonica:74 C.trachomatis:74

K7HD96              	100.00%		O84463              	100.00%
Bootstrap support for K7HD96 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #130. Best score 74 bits
Score difference with first non-orthologous sequence - C.japonica:74 C.trachomatis:74

K7HW53              	100.00%		P0CD81              	100.00%
Bootstrap support for K7HW53 as seed ortholog is 100%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #131. Best score 73 bits
Score difference with first non-orthologous sequence - C.japonica:73 C.trachomatis:73

H2VUU3              	100.00%		P0C0Z8              	100.00%
Bootstrap support for H2VUU3 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #132. Best score 73 bits
Score difference with first non-orthologous sequence - C.japonica:73 C.trachomatis:73

H2WAJ2              	100.00%		P0CE06              	100.00%
Bootstrap support for H2WAJ2 as seed ortholog is 100%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #133. Best score 73 bits
Score difference with first non-orthologous sequence - C.japonica:6 C.trachomatis:73

H2WLE3              	100.00%		P0CE03              	100.00%
Bootstrap support for H2WLE3 as seed ortholog is 67%.
Alternative seed ortholog is H2W6M8 (6 bits away from this cluster)
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #134. Best score 72 bits
Score difference with first non-orthologous sequence - C.japonica:72 C.trachomatis:72

H2WKX2              	100.00%		O84096              	100.00%
K7IJV3              	100.00%		
Bootstrap support for H2WKX2 as seed ortholog is 100%.
Bootstrap support for K7IJV3 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #135. Best score 72 bits
Score difference with first non-orthologous sequence - C.japonica:9 C.trachomatis:72

H2W0G5              	100.00%		O84658              	100.00%
Bootstrap support for H2W0G5 as seed ortholog is 63%.
Alternative seed ortholog is K7GYV0 (9 bits away from this cluster)
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #136. Best score 69 bits
Score difference with first non-orthologous sequence - C.japonica:69 C.trachomatis:69

H2W673              	100.00%		O84128              	100.00%
Bootstrap support for H2W673 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #137. Best score 68 bits
Score difference with first non-orthologous sequence - C.japonica:18 C.trachomatis:68

H2W6J2              	100.00%		O84742              	100.00%
Bootstrap support for H2W6J2 as seed ortholog is 77%.
Bootstrap support for O84742 as seed ortholog is 100%.

Group of orthologs #138. Best score 67 bits
Score difference with first non-orthologous sequence - C.japonica:67 C.trachomatis:67

H2VQ74              	100.00%		O84544              	100.00%
K7ICN0              	13.42%		
Bootstrap support for H2VQ74 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #139. Best score 66 bits
Score difference with first non-orthologous sequence - C.japonica:66 C.trachomatis:66

H2VI12              	100.00%		O84189              	100.00%
Bootstrap support for H2VI12 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #140. Best score 63 bits
Score difference with first non-orthologous sequence - C.japonica:63 C.trachomatis:63

H2VHQ4              	100.00%		O84611              	100.00%
Bootstrap support for H2VHQ4 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #141. Best score 62 bits
Score difference with first non-orthologous sequence - C.japonica:62 C.trachomatis:62

H2W5E7              	100.00%		O84618              	100.00%
K7HWT7              	100.00%		
Bootstrap support for H2W5E7 as seed ortholog is 100%.
Bootstrap support for K7HWT7 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #142. Best score 62 bits
Score difference with first non-orthologous sequence - C.japonica:62 C.trachomatis:62

H2WGA5              	100.00%		P36424              	100.00%
Bootstrap support for H2WGA5 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #143. Best score 62 bits
Score difference with first non-orthologous sequence - C.japonica:62 C.trachomatis:62

K7GWI1              	100.00%		O84496              	100.00%
Bootstrap support for K7GWI1 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #144. Best score 61 bits
Score difference with first non-orthologous sequence - C.japonica:61 C.trachomatis:61

H2WU11              	100.00%		O84284              	100.00%
K7H365              	59.57%		
Bootstrap support for H2WU11 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #145. Best score 61 bits
Score difference with first non-orthologous sequence - C.japonica:61 C.trachomatis:61

K7I1X5              	100.00%		O84872              	100.00%
                    	       		O84351              	10.65%
Bootstrap support for K7I1X5 as seed ortholog is 100%.
Bootstrap support for O84872 as seed ortholog is 100%.

Group of orthologs #146. Best score 60 bits
Score difference with first non-orthologous sequence - C.japonica:60 C.trachomatis:60

H2VV32              	100.00%		O84547              	100.00%
Bootstrap support for H2VV32 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #147. Best score 59 bits
Score difference with first non-orthologous sequence - C.japonica:59 C.trachomatis:59

H2W2Q9              	100.00%		P0A4C8              	100.00%
Bootstrap support for H2W2Q9 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #148. Best score 58 bits
Score difference with first non-orthologous sequence - C.japonica:58 C.trachomatis:58

H2VRL0              	100.00%		O84239              	100.00%
H2WL21              	20.40%		
Bootstrap support for H2VRL0 as seed ortholog is 100%.
Bootstrap support for O84239 as seed ortholog is 100%.

Group of orthologs #149. Best score 57 bits
Score difference with first non-orthologous sequence - C.japonica:57 C.trachomatis:57

H2WN11              	100.00%		O84527              	100.00%
Bootstrap support for H2WN11 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #150. Best score 56 bits
Score difference with first non-orthologous sequence - C.japonica:56 C.trachomatis:56

H2W4G6              	100.00%		P0CE04              	100.00%
K7H8D9              	62.07%		
Bootstrap support for H2W4G6 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #151. Best score 56 bits
Score difference with first non-orthologous sequence - C.japonica:56 C.trachomatis:56

H2X678              	100.00%		O84033              	100.00%
Bootstrap support for H2X678 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #152. Best score 56 bits
Score difference with first non-orthologous sequence - C.japonica:56 C.trachomatis:56

K7IAR7              	100.00%		O84044              	100.00%
Bootstrap support for K7IAR7 as seed ortholog is 100%.
Bootstrap support for O84044 as seed ortholog is 100%.

Group of orthologs #153. Best score 55 bits
Score difference with first non-orthologous sequence - C.japonica:55 C.trachomatis:55

H2WQP8              	100.00%		O84682              	100.00%
H2VY71              	63.58%		
Bootstrap support for H2WQP8 as seed ortholog is 100%.
Bootstrap support for O84682 as seed ortholog is 100%.

Group of orthologs #154. Best score 55 bits
Score difference with first non-orthologous sequence - C.japonica:55 C.trachomatis:55

H2VUS8              	100.00%		O84395              	100.00%
Bootstrap support for H2VUS8 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #155. Best score 54 bits
Score difference with first non-orthologous sequence - C.japonica:54 C.trachomatis:54

H2XGW2              	100.00%		O84147              	100.00%
K7I525              	18.42%		
H2W0W9              	16.19%		
H2X993              	15.65%		
H2VGS6              	9.80%		
K7H7W2              	8.63%		
H2W6H0              	7.67%		
K7GTW6              	6.92%		
K7HJU8              	6.71%		
K7GU62              	6.18%		
H2VMW5              	6.18%		
K7H7J0              	5.75%		
H2W5J1              	5.22%		
H2W0E4              	5.11%		
Bootstrap support for H2XGW2 as seed ortholog is 100%.
Bootstrap support for O84147 as seed ortholog is 100%.

Group of orthologs #156. Best score 53 bits
Score difference with first non-orthologous sequence - C.japonica:53 C.trachomatis:53

H2WLQ1              	100.00%		O84680              	100.00%
H2WI23              	55.80%		
K7H0P3              	30.04%		
K7GZ49              	21.37%		
H2VPN3              	18.44%		
H2WQJ2              	17.95%		
H2WIL1              	11.84%		
K7HNP0              	11.36%		
H2W8N5              	11.23%		
H2VZ64              	11.11%		
H2W8H5              	11.11%		
H2VMV0              	10.38%		
H2WFM3              	10.38%		
H2VMU5              	9.89%		
H2WJP2              	9.89%		
H2WKL3              	9.65%		
K7GUS1              	9.28%		
H2W9A7              	9.16%		
H2VI99              	8.91%		
H2WJ66              	7.81%		
H2WK22              	7.33%		
H2WD31              	6.23%		
H2W5R3              	5.86%		
Bootstrap support for H2WLQ1 as seed ortholog is 100%.
Bootstrap support for O84680 as seed ortholog is 100%.

Group of orthologs #157. Best score 52 bits
Score difference with first non-orthologous sequence - C.japonica:52 C.trachomatis:52

H2VN14              	100.00%		O84032              	100.00%
Bootstrap support for H2VN14 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #158. Best score 50 bits
Score difference with first non-orthologous sequence - C.japonica:50 C.trachomatis:50

H2W213              	100.00%		O84459              	100.00%
K7HFR5              	19.96%		
H2W011              	17.66%		
Bootstrap support for H2W213 as seed ortholog is 100%.
Bootstrap support for O84459 as seed ortholog is 100%.

Group of orthologs #159. Best score 50 bits
Score difference with first non-orthologous sequence - C.japonica:50 C.trachomatis:50

H2VSS4              	100.00%		O84777              	100.00%
Bootstrap support for H2VSS4 as seed ortholog is 100%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #160. Best score 50 bits
Score difference with first non-orthologous sequence - C.japonica:50 C.trachomatis:50

H2VTF9              	100.00%		P0CE02              	100.00%
Bootstrap support for H2VTF9 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #161. Best score 50 bits
Score difference with first non-orthologous sequence - C.japonica:50 C.trachomatis:50

H2WAE6              	100.00%		P66370              	100.00%
Bootstrap support for H2WAE6 as seed ortholog is 100%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #162. Best score 49 bits
Score difference with first non-orthologous sequence - C.japonica:49 C.trachomatis:49

H2W0A9              	100.00%		O84127              	100.00%
Bootstrap support for H2W0A9 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #163. Best score 46 bits
Score difference with first non-orthologous sequence - C.japonica:46 C.trachomatis:46

K7GXA4              	100.00%		O84803              	100.00%
Bootstrap support for K7GXA4 as seed ortholog is 100%.
Bootstrap support for O84803 as seed ortholog is 100%.

Group of orthologs #164. Best score 44 bits
Score difference with first non-orthologous sequence - C.japonica:44 C.trachomatis:44

H2W6K9              	100.00%		P0CE05              	100.00%
Bootstrap support for H2W6K9 as seed ortholog is 100%.
Bootstrap support for P0CE05 as seed ortholog is 100%.

Group of orthologs #165. Best score 44 bits
Score difference with first non-orthologous sequence - C.japonica:44 C.trachomatis:44

H2WA79              	100.00%		O84778              	100.00%
Bootstrap support for H2WA79 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #166. Best score 44 bits
Score difference with first non-orthologous sequence - C.japonica:44 C.trachomatis:44

H2WDZ9              	100.00%		O84689              	100.00%
Bootstrap support for H2WDZ9 as seed ortholog is 100%.
Bootstrap support for O84689 as seed ortholog is 100%.