###################################
1480 groups of orthologs
2709 in-paralogs from C.jacchus
1558 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3646 bits
Score difference with first non-orthologous sequence - C.jacchus:3646 P.jiroveci:3646

F7H9Y0              	100.00%		L0PCQ0              	100.00%
Bootstrap support for F7H9Y0 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 2227 bits
Score difference with first non-orthologous sequence - C.jacchus:2227 P.jiroveci:2227

F7B8X4              	100.00%		L0PEQ1              	100.00%
Bootstrap support for F7B8X4 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #3. Best score 2155 bits
Score difference with first non-orthologous sequence - C.jacchus:2155 P.jiroveci:2155

F7IBV6              	100.00%		L0PHB1              	100.00%
Bootstrap support for F7IBV6 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #4. Best score 1980 bits
Score difference with first non-orthologous sequence - C.jacchus:1416 P.jiroveci:1980

F6XI89              	100.00%		L0PB90              	100.00%
Bootstrap support for F6XI89 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #5. Best score 1844 bits
Score difference with first non-orthologous sequence - C.jacchus:1844 P.jiroveci:1844

F7BFZ3              	100.00%		L0PEL4              	100.00%
Bootstrap support for F7BFZ3 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #6. Best score 1841 bits
Score difference with first non-orthologous sequence - C.jacchus:1841 P.jiroveci:1841

F6XFU0              	100.00%		L0PGI2              	100.00%
Bootstrap support for F6XFU0 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #7. Best score 1830 bits
Score difference with first non-orthologous sequence - C.jacchus:1830 P.jiroveci:1830

F7IKY7              	100.00%		L0PBF5              	100.00%
Bootstrap support for F7IKY7 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #8. Best score 1741 bits
Score difference with first non-orthologous sequence - C.jacchus:563 P.jiroveci:1741

F7I7B7              	100.00%		L0P7C3              	100.00%
Bootstrap support for F7I7B7 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #9. Best score 1570 bits
Score difference with first non-orthologous sequence - C.jacchus:1570 P.jiroveci:1570

F7HRL8              	100.00%		L0PFL5              	100.00%
Bootstrap support for F7HRL8 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #10. Best score 1562 bits
Score difference with first non-orthologous sequence - C.jacchus:1562 P.jiroveci:1562

F7FZT0              	100.00%		L0PGJ4              	100.00%
Bootstrap support for F7FZT0 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1475 bits
Score difference with first non-orthologous sequence - C.jacchus:1475 P.jiroveci:1475

F7IN81              	100.00%		L0PD06              	100.00%
Bootstrap support for F7IN81 as seed ortholog is 100%.
Bootstrap support for L0PD06 as seed ortholog is 100%.

Group of orthologs #12. Best score 1419 bits
Score difference with first non-orthologous sequence - C.jacchus:686 P.jiroveci:1419

F7G4S4              	100.00%		L0PG77              	100.00%
Bootstrap support for F7G4S4 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #13. Best score 1344 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:1344

F7HVM5              	100.00%		L0PGR1              	100.00%
Bootstrap support for F7HVM5 as seed ortholog is 87%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #14. Best score 1341 bits
Score difference with first non-orthologous sequence - C.jacchus:1341 P.jiroveci:1341

F6R058              	100.00%		L0PG53              	100.00%
Bootstrap support for F6R058 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #15. Best score 1341 bits
Score difference with first non-orthologous sequence - C.jacchus:852 P.jiroveci:944

F6WHF1              	100.00%		L0PB43              	100.00%
Bootstrap support for F6WHF1 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #16. Best score 1288 bits
Score difference with first non-orthologous sequence - C.jacchus:1288 P.jiroveci:1288

F7F1S5              	100.00%		L0PCG8              	100.00%
Bootstrap support for F7F1S5 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #17. Best score 1240 bits
Score difference with first non-orthologous sequence - C.jacchus:1240 P.jiroveci:1240

F6S771              	100.00%		L0P818              	100.00%
F6T9B4              	38.72%		
Bootstrap support for F6S771 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #18. Best score 1218 bits
Score difference with first non-orthologous sequence - C.jacchus:1218 P.jiroveci:1218

F7A6P4              	100.00%		L0PFU4              	100.00%
Bootstrap support for F7A6P4 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #19. Best score 1193 bits
Score difference with first non-orthologous sequence - C.jacchus:1193 P.jiroveci:1193

F6ZKF5              	100.00%		L0PBY6              	100.00%
Bootstrap support for F6ZKF5 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #20. Best score 1178 bits
Score difference with first non-orthologous sequence - C.jacchus:601 P.jiroveci:1178

F7DVK9              	100.00%		L0PEW0              	100.00%
Bootstrap support for F7DVK9 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #21. Best score 1178 bits
Score difference with first non-orthologous sequence - C.jacchus:1178 P.jiroveci:1178

F7HDF7              	100.00%		L0P928              	100.00%
Bootstrap support for F7HDF7 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #22. Best score 1159 bits
Score difference with first non-orthologous sequence - C.jacchus:763 P.jiroveci:1159

F7I888              	100.00%		L0PBE4              	100.00%
Bootstrap support for F7I888 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #23. Best score 1145 bits
Score difference with first non-orthologous sequence - C.jacchus:1145 P.jiroveci:1145

F7DHL3              	100.00%		L0PCR2              	100.00%
Bootstrap support for F7DHL3 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #24. Best score 1107 bits
Score difference with first non-orthologous sequence - C.jacchus:1107 P.jiroveci:1107

F7IFK2              	100.00%		L0PDK3              	100.00%
Bootstrap support for F7IFK2 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #25. Best score 1064 bits
Score difference with first non-orthologous sequence - C.jacchus:586 P.jiroveci:578

F7GG00              	100.00%		L0PB13              	100.00%
Bootstrap support for F7GG00 as seed ortholog is 100%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #26. Best score 1062 bits
Score difference with first non-orthologous sequence - C.jacchus:638 P.jiroveci:1062

F7HSM0              	100.00%		L0PG21              	100.00%
F7HW32              	61.11%		
Bootstrap support for F7HSM0 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #27. Best score 1024 bits
Score difference with first non-orthologous sequence - C.jacchus:328 P.jiroveci:1024

H9KXL2              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.08%
Bootstrap support for H9KXL2 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #28. Best score 1010 bits
Score difference with first non-orthologous sequence - C.jacchus:1010 P.jiroveci:1010

F6TRY9              	100.00%		L0P7P6              	100.00%
Bootstrap support for F6TRY9 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #29. Best score 1002 bits
Score difference with first non-orthologous sequence - C.jacchus:1002 P.jiroveci:1002

F7IRF0              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	80.28%
Bootstrap support for F7IRF0 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.

Group of orthologs #30. Best score 977 bits
Score difference with first non-orthologous sequence - C.jacchus:977 P.jiroveci:977

F7H9R4              	100.00%		L0P9F0              	100.00%
Bootstrap support for F7H9R4 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #31. Best score 975 bits
Score difference with first non-orthologous sequence - C.jacchus:975 P.jiroveci:427

F7C7Q4              	100.00%		L0P8X7              	100.00%
Bootstrap support for F7C7Q4 as seed ortholog is 100%.
Bootstrap support for L0P8X7 as seed ortholog is 100%.

Group of orthologs #32. Best score 971 bits
Score difference with first non-orthologous sequence - C.jacchus:586 P.jiroveci:971

F6Y6Q9              	100.00%		L0P9P7              	100.00%
Bootstrap support for F6Y6Q9 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #33. Best score 966 bits
Score difference with first non-orthologous sequence - C.jacchus:803 P.jiroveci:966

F7IB07              	100.00%		L0PFN4              	100.00%
Bootstrap support for F7IB07 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #34. Best score 965 bits
Score difference with first non-orthologous sequence - C.jacchus:965 P.jiroveci:359

F7AKT2              	100.00%		L0PDB3              	100.00%
Bootstrap support for F7AKT2 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #35. Best score 960 bits
Score difference with first non-orthologous sequence - C.jacchus:270 P.jiroveci:745

F7HXN6              	100.00%		L0PEK6              	100.00%
F6W7H3              	42.34%		
F6VLQ4              	39.94%		
F6UL05              	33.33%		
Bootstrap support for F7HXN6 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #36. Best score 958 bits
Score difference with first non-orthologous sequence - C.jacchus:492 P.jiroveci:958

F7BZH7              	100.00%		L0PDI4              	100.00%
F6YYM7              	71.17%		
F7CPM8              	67.58%		
F6ZQR4              	52.94%		
F7I4V9              	16.14%		
F7IA55              	15.86%		
F7EG07              	15.37%		
F7DLZ9              	15.30%		
F7HXM0              	15.30%		
F7FKN4              	15.17%		
F6RCH0              	12.63%		
F7IAZ2              	9.70%		
Bootstrap support for F7BZH7 as seed ortholog is 100%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #37. Best score 954 bits
Score difference with first non-orthologous sequence - C.jacchus:954 P.jiroveci:954

F7IDC3              	100.00%		L0PAK7              	100.00%
                    	       		L0P8F2              	66.47%
Bootstrap support for F7IDC3 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.

Group of orthologs #38. Best score 954 bits
Score difference with first non-orthologous sequence - C.jacchus:954 P.jiroveci:954

F7DT63              	100.00%		L0P915              	100.00%
Bootstrap support for F7DT63 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #39. Best score 950 bits
Score difference with first non-orthologous sequence - C.jacchus:232 P.jiroveci:884

F7H2Q6              	100.00%		L0PG61              	100.00%
F7EGC2              	41.78%		
Bootstrap support for F7H2Q6 as seed ortholog is 99%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #40. Best score 941 bits
Score difference with first non-orthologous sequence - C.jacchus:416 P.jiroveci:426

F6Z1Q6              	100.00%		L0PAJ7              	100.00%
Bootstrap support for F6Z1Q6 as seed ortholog is 100%.
Bootstrap support for L0PAJ7 as seed ortholog is 100%.

Group of orthologs #41. Best score 930 bits
Score difference with first non-orthologous sequence - C.jacchus:930 P.jiroveci:930

F6YR44              	100.00%		L0P7V0              	100.00%
Bootstrap support for F6YR44 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #42. Best score 911 bits
Score difference with first non-orthologous sequence - C.jacchus:396 P.jiroveci:380

F7HGM8              	100.00%		L0PFC8              	100.00%
Bootstrap support for F7HGM8 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #43. Best score 871 bits
Score difference with first non-orthologous sequence - C.jacchus:453 P.jiroveci:788

F6XS29              	100.00%		L0PAG9              	100.00%
F7BLU9              	36.52%		
Bootstrap support for F6XS29 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #44. Best score 860 bits
Score difference with first non-orthologous sequence - C.jacchus:860 P.jiroveci:860

F6PM44              	100.00%		L0PCC4              	100.00%
Bootstrap support for F6PM44 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #45. Best score 854 bits
Score difference with first non-orthologous sequence - C.jacchus:507 P.jiroveci:554

F7I0N5              	100.00%		L0PCW9              	100.00%
F7I2Y8              	57.85%		
F6RBJ2              	39.24%		
Bootstrap support for F7I0N5 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #46. Best score 849 bits
Score difference with first non-orthologous sequence - C.jacchus:849 P.jiroveci:849

F7DBY4              	100.00%		L0PAV3              	100.00%
Bootstrap support for F7DBY4 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #47. Best score 847 bits
Score difference with first non-orthologous sequence - C.jacchus:847 P.jiroveci:847

F7IHI7              	100.00%		L0PEU6              	100.00%
F6UKD9              	60.24%		
Bootstrap support for F7IHI7 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #48. Best score 845 bits
Score difference with first non-orthologous sequence - C.jacchus:484 P.jiroveci:693

F7EX52              	100.00%		L0PFS2              	100.00%
Bootstrap support for F7EX52 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #49. Best score 841 bits
Score difference with first non-orthologous sequence - C.jacchus:472 P.jiroveci:841

F7HPT2              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	24.17%
Bootstrap support for F7HPT2 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 100%.

Group of orthologs #50. Best score 837 bits
Score difference with first non-orthologous sequence - C.jacchus:691 P.jiroveci:837

F7HUH7              	100.00%		L0PEL5              	100.00%
F7C7U1              	60.76%		L0PGC2              	47.82%
Bootstrap support for F7HUH7 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #51. Best score 837 bits
Score difference with first non-orthologous sequence - C.jacchus:837 P.jiroveci:837

F6YKX5              	100.00%		L0PDF1              	100.00%
Bootstrap support for F6YKX5 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #52. Best score 835 bits
Score difference with first non-orthologous sequence - C.jacchus:835 P.jiroveci:835

F7EXP4              	100.00%		L0PGR4              	100.00%
F6Z9S0              	58.27%		L0PFQ2              	92.17%
Bootstrap support for F7EXP4 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #53. Best score 832 bits
Score difference with first non-orthologous sequence - C.jacchus:225 P.jiroveci:637

F6R5D6              	100.00%		L0PFV0              	100.00%
Bootstrap support for F6R5D6 as seed ortholog is 100%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #54. Best score 831 bits
Score difference with first non-orthologous sequence - C.jacchus:831 P.jiroveci:673

F7HK61              	100.00%		L0PBQ6              	100.00%
Bootstrap support for F7HK61 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #55. Best score 828 bits
Score difference with first non-orthologous sequence - C.jacchus:828 P.jiroveci:828

F7DJM6              	100.00%		L0P9H4              	100.00%
Bootstrap support for F7DJM6 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #56. Best score 827 bits
Score difference with first non-orthologous sequence - C.jacchus:610 P.jiroveci:827

F7I419              	100.00%		L0PD55              	100.00%
Bootstrap support for F7I419 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #57. Best score 824 bits
Score difference with first non-orthologous sequence - C.jacchus:824 P.jiroveci:824

F7I4E1              	100.00%		L0PDQ4              	100.00%
Bootstrap support for F7I4E1 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #58. Best score 817 bits
Score difference with first non-orthologous sequence - C.jacchus:595 P.jiroveci:817

F6WUZ0              	100.00%		L0PGL8              	100.00%
Bootstrap support for F6WUZ0 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #59. Best score 814 bits
Score difference with first non-orthologous sequence - C.jacchus:512 P.jiroveci:814

F7HS45              	100.00%		L0PBL6              	100.00%
Bootstrap support for F7HS45 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #60. Best score 811 bits
Score difference with first non-orthologous sequence - C.jacchus:601 P.jiroveci:711

F7IMA7              	100.00%		L0PC93              	100.00%
Bootstrap support for F7IMA7 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #61. Best score 808 bits
Score difference with first non-orthologous sequence - C.jacchus:808 P.jiroveci:808

F7H585              	100.00%		L0PE96              	100.00%
Bootstrap support for F7H585 as seed ortholog is 100%.
Bootstrap support for L0PE96 as seed ortholog is 100%.

Group of orthologs #62. Best score 806 bits
Score difference with first non-orthologous sequence - C.jacchus:806 P.jiroveci:806

F6Z4J6              	100.00%		L0PFF9              	100.00%
Bootstrap support for F6Z4J6 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #63. Best score 796 bits
Score difference with first non-orthologous sequence - C.jacchus:796 P.jiroveci:796

F7I3H8              	100.00%		L0PH89              	100.00%
Bootstrap support for F7I3H8 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #64. Best score 792 bits
Score difference with first non-orthologous sequence - C.jacchus:792 P.jiroveci:792

F6WVR2              	100.00%		L0PBD7              	100.00%
F7D5I7              	72.14%		
Bootstrap support for F6WVR2 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #65. Best score 790 bits
Score difference with first non-orthologous sequence - C.jacchus:790 P.jiroveci:790

F6S0I7              	100.00%		L0P9W2              	100.00%
Bootstrap support for F6S0I7 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #66. Best score 784 bits
Score difference with first non-orthologous sequence - C.jacchus:784 P.jiroveci:784

F7DY30              	100.00%		L0P7X5              	100.00%
Bootstrap support for F7DY30 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #67. Best score 782 bits
Score difference with first non-orthologous sequence - C.jacchus:782 P.jiroveci:782

F6XK43              	100.00%		L0PC54              	100.00%
Bootstrap support for F6XK43 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #68. Best score 781 bits
Score difference with first non-orthologous sequence - C.jacchus:167 P.jiroveci:781

F7CXD3              	100.00%		L0PBA5              	100.00%
F7HQ79              	90.67%		
F7HG83              	58.67%		
Bootstrap support for F7CXD3 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #69. Best score 780 bits
Score difference with first non-orthologous sequence - C.jacchus:706 P.jiroveci:780

F7HHD8              	100.00%		L0P7V1              	100.00%
Bootstrap support for F7HHD8 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #70. Best score 779 bits
Score difference with first non-orthologous sequence - C.jacchus:779 P.jiroveci:779

F6U000              	100.00%		L0PAN4              	100.00%
Bootstrap support for F6U000 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #71. Best score 775 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:775

F6SUF9              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	100.00%
Bootstrap support for F6SUF9 as seed ortholog is 99%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.
Bootstrap support for L0PBZ0 as seed ortholog is 100%.

Group of orthologs #72. Best score 770 bits
Score difference with first non-orthologous sequence - C.jacchus:694 P.jiroveci:770

F7GQX5              	100.00%		L0P9R9              	100.00%
Bootstrap support for F7GQX5 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #73. Best score 762 bits
Score difference with first non-orthologous sequence - C.jacchus:762 P.jiroveci:762

F7GUR3              	100.00%		L0P710              	100.00%
Bootstrap support for F7GUR3 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #74. Best score 759 bits
Score difference with first non-orthologous sequence - C.jacchus:759 P.jiroveci:759

F7A6M8              	100.00%		L0PA62              	100.00%
Bootstrap support for F7A6M8 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #75. Best score 758 bits
Score difference with first non-orthologous sequence - C.jacchus:289 P.jiroveci:758

F7I3D5              	100.00%		L0PGU1              	100.00%
F6ZG17              	51.31%		
F6USL1              	30.65%		
Bootstrap support for F7I3D5 as seed ortholog is 99%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #76. Best score 755 bits
Score difference with first non-orthologous sequence - C.jacchus:5 P.jiroveci:606

F7IMY8              	100.00%		L0PAC9              	100.00%
F7E767              	31.17%		
F7GQ88              	28.24%		
Bootstrap support for F7IMY8 as seed ortholog is 86%.
Bootstrap support for L0PAC9 as seed ortholog is 100%.

Group of orthologs #77. Best score 754 bits
Score difference with first non-orthologous sequence - C.jacchus:754 P.jiroveci:397

F7I8C3              	100.00%		L0P9U5              	100.00%
F7IRD8              	29.32%		
Bootstrap support for F7I8C3 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #78. Best score 749 bits
Score difference with first non-orthologous sequence - C.jacchus:749 P.jiroveci:749

F6V9M8              	100.00%		L0PBF3              	100.00%
Bootstrap support for F6V9M8 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #79. Best score 747 bits
Score difference with first non-orthologous sequence - C.jacchus:747 P.jiroveci:288

F7DUD9              	100.00%		L0P833              	100.00%
Bootstrap support for F7DUD9 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #80. Best score 747 bits
Score difference with first non-orthologous sequence - C.jacchus:398 P.jiroveci:747

F7IM13              	100.00%		L0PB83              	100.00%
Bootstrap support for F7IM13 as seed ortholog is 100%.
Bootstrap support for L0PB83 as seed ortholog is 100%.

Group of orthologs #81. Best score 745 bits
Score difference with first non-orthologous sequence - C.jacchus:745 P.jiroveci:745

F7HWP6              	100.00%		L0P7K0              	100.00%
Bootstrap support for F7HWP6 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #82. Best score 741 bits
Score difference with first non-orthologous sequence - C.jacchus:336 P.jiroveci:741

F7DU72              	100.00%		L0PFJ0              	100.00%
Bootstrap support for F7DU72 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #83. Best score 739 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:739

F7BS59              	100.00%		L0PBR4              	100.00%
F6UCQ6              	59.15%		
F7IHJ4              	57.32%		
F7DHL8              	56.10%		
F7FII9              	53.66%		
F6QFP4              	50.61%		
F6TQ68              	41.46%		
F7IHK1              	26.83%		
H9KXG9              	17.07%		
Bootstrap support for F7BS59 as seed ortholog is 99%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #84. Best score 737 bits
Score difference with first non-orthologous sequence - C.jacchus:294 P.jiroveci:737

F7CVL7              	100.00%		L0PC37              	100.00%
Bootstrap support for F7CVL7 as seed ortholog is 99%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #85. Best score 737 bits
Score difference with first non-orthologous sequence - C.jacchus:737 P.jiroveci:737

F7IFC7              	100.00%		L0PG27              	100.00%
Bootstrap support for F7IFC7 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #86. Best score 732 bits
Score difference with first non-orthologous sequence - C.jacchus:234 P.jiroveci:732

F7IRC5              	100.00%		L0PB85              	100.00%
F7HXY1              	23.69%		
Bootstrap support for F7IRC5 as seed ortholog is 99%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #87. Best score 730 bits
Score difference with first non-orthologous sequence - C.jacchus:730 P.jiroveci:730

F6RLM6              	100.00%		L0PAS8              	100.00%
F7I1M2              	51.22%		
Bootstrap support for F6RLM6 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #88. Best score 728 bits
Score difference with first non-orthologous sequence - C.jacchus:472 P.jiroveci:728

F6Y1Q5              	100.00%		L0PGA5              	100.00%
F7AQH0              	63.83%		
F7GPX7              	61.40%		
Bootstrap support for F6Y1Q5 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #89. Best score 727 bits
Score difference with first non-orthologous sequence - C.jacchus:727 P.jiroveci:727

F6S2Y1              	100.00%		L0PAQ3              	100.00%
F6STU1              	71.26%		
F7IAB4              	52.10%		
Bootstrap support for F6S2Y1 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #90. Best score 726 bits
Score difference with first non-orthologous sequence - C.jacchus:726 P.jiroveci:655

F7BVQ5              	100.00%		L0PA93              	100.00%
Bootstrap support for F7BVQ5 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #91. Best score 723 bits
Score difference with first non-orthologous sequence - C.jacchus:723 P.jiroveci:723

F6TJ85              	100.00%		L0PF68              	100.00%
Bootstrap support for F6TJ85 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #92. Best score 723 bits
Score difference with first non-orthologous sequence - C.jacchus:723 P.jiroveci:723

F7BZ13              	100.00%		L0PBW3              	100.00%
Bootstrap support for F7BZ13 as seed ortholog is 100%.
Bootstrap support for L0PBW3 as seed ortholog is 100%.

Group of orthologs #93. Best score 719 bits
Score difference with first non-orthologous sequence - C.jacchus:719 P.jiroveci:719

F6QKI2              	100.00%		L0PBP8              	100.00%
Bootstrap support for F6QKI2 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #94. Best score 718 bits
Score difference with first non-orthologous sequence - C.jacchus:491 P.jiroveci:718

F7G831              	100.00%		L0PBV5              	100.00%
F7HUM7              	83.39%		
Bootstrap support for F7G831 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #95. Best score 716 bits
Score difference with first non-orthologous sequence - C.jacchus:716 P.jiroveci:716

F7HYP4              	100.00%		L0PDK6              	100.00%
Bootstrap support for F7HYP4 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #96. Best score 703 bits
Score difference with first non-orthologous sequence - C.jacchus:703 P.jiroveci:703

F7F4V3              	100.00%		L0PBY5              	100.00%
F7H6Y8              	42.38%		
Bootstrap support for F7F4V3 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #97. Best score 699 bits
Score difference with first non-orthologous sequence - C.jacchus:699 P.jiroveci:699

F7IEL5              	100.00%		L0PE57              	100.00%
Bootstrap support for F7IEL5 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #98. Best score 698 bits
Score difference with first non-orthologous sequence - C.jacchus:473 P.jiroveci:698

F6TE24              	100.00%		L0P945              	100.00%
Bootstrap support for F6TE24 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #99. Best score 691 bits
Score difference with first non-orthologous sequence - C.jacchus:329 P.jiroveci:691

F7AST7              	100.00%		L0PEK9              	100.00%
Bootstrap support for F7AST7 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #100. Best score 689 bits
Score difference with first non-orthologous sequence - C.jacchus:689 P.jiroveci:689

F7H3B4              	100.00%		L0PDF3              	100.00%
Bootstrap support for F7H3B4 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #101. Best score 687 bits
Score difference with first non-orthologous sequence - C.jacchus:144 P.jiroveci:532

F7HJT1              	100.00%		L0PA91              	100.00%
F7I0W8              	100.00%		
F7HZW2              	98.59%		
F7DFE2              	77.46%		
F7IH64              	53.52%		
F7HY33              	52.11%		
F7H022              	50.70%		
F7GZL1              	46.48%		
F7FWZ0              	42.25%		
F7E9M4              	36.99%		
F7IT74              	7.04%		
Bootstrap support for F7HJT1 as seed ortholog is 100%.
Bootstrap support for F7I0W8 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #102. Best score 686 bits
Score difference with first non-orthologous sequence - C.jacchus:303 P.jiroveci:686

F7I1D6              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	40.48%
Bootstrap support for F7I1D6 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #103. Best score 685 bits
Score difference with first non-orthologous sequence - C.jacchus:685 P.jiroveci:685

F7IMR4              	100.00%		L0P8L6              	100.00%
Bootstrap support for F7IMR4 as seed ortholog is 100%.
Bootstrap support for L0P8L6 as seed ortholog is 100%.

Group of orthologs #104. Best score 684 bits
Score difference with first non-orthologous sequence - C.jacchus:425 P.jiroveci:684

F6PSS8              	100.00%		L0PBW7              	100.00%
Bootstrap support for F6PSS8 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #105. Best score 684 bits
Score difference with first non-orthologous sequence - C.jacchus:302 P.jiroveci:684

F6TEX0              	100.00%		L0PG45              	100.00%
Bootstrap support for F6TEX0 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #106. Best score 681 bits
Score difference with first non-orthologous sequence - C.jacchus:585 P.jiroveci:681

F7HWL5              	100.00%		L0PA41              	100.00%
Bootstrap support for F7HWL5 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #107. Best score 680 bits
Score difference with first non-orthologous sequence - C.jacchus:470 P.jiroveci:680

F7IS73              	100.00%		L0P976              	100.00%
Bootstrap support for F7IS73 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #108. Best score 676 bits
Score difference with first non-orthologous sequence - C.jacchus:676 P.jiroveci:676

F6PPP0              	100.00%		L0PC79              	100.00%
F7GBX3              	29.11%		
F7IBX3              	20.79%		
Bootstrap support for F6PPP0 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #109. Best score 676 bits
Score difference with first non-orthologous sequence - C.jacchus:676 P.jiroveci:676

F7HS43              	100.00%		L0PC65              	100.00%
F7CKK2              	44.23%		
Bootstrap support for F7HS43 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #110. Best score 672 bits
Score difference with first non-orthologous sequence - C.jacchus:400 P.jiroveci:578

F7IT31              	100.00%		L0PCT0              	100.00%
Bootstrap support for F7IT31 as seed ortholog is 100%.
Bootstrap support for L0PCT0 as seed ortholog is 100%.

Group of orthologs #111. Best score 670 bits
Score difference with first non-orthologous sequence - C.jacchus:670 P.jiroveci:670

F6X8M9              	100.00%		L0P971              	100.00%
Bootstrap support for F6X8M9 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #112. Best score 667 bits
Score difference with first non-orthologous sequence - C.jacchus:551 P.jiroveci:544

F7CSF0              	100.00%		L0PIF0              	100.00%
F6WFT0              	18.18%		
F7I940              	8.93%		
F7I067              	8.56%		
Bootstrap support for F7CSF0 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #113. Best score 664 bits
Score difference with first non-orthologous sequence - C.jacchus:398 P.jiroveci:540

F7F1L2              	100.00%		L0PE26              	100.00%
Bootstrap support for F7F1L2 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #114. Best score 661 bits
Score difference with first non-orthologous sequence - C.jacchus:392 P.jiroveci:661

F7I173              	100.00%		L0PG19              	100.00%
Bootstrap support for F7I173 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #115. Best score 661 bits
Score difference with first non-orthologous sequence - C.jacchus:661 P.jiroveci:368

F7I4R7              	100.00%		L0PFG7              	100.00%
Bootstrap support for F7I4R7 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #116. Best score 660 bits
Score difference with first non-orthologous sequence - C.jacchus:609 P.jiroveci:660

F6YQY4              	100.00%		L0P8M6              	100.00%
F7DLB0              	71.50%		
F6U515              	9.75%		
Bootstrap support for F6YQY4 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #117. Best score 659 bits
Score difference with first non-orthologous sequence - C.jacchus:473 P.jiroveci:659

F7CWM9              	100.00%		L0PER6              	100.00%
Bootstrap support for F7CWM9 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #118. Best score 656 bits
Score difference with first non-orthologous sequence - C.jacchus:656 P.jiroveci:656

F7IN96              	100.00%		L0PDI6              	100.00%
Bootstrap support for F7IN96 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #119. Best score 653 bits
Score difference with first non-orthologous sequence - C.jacchus:383 P.jiroveci:653

F6R5Z2              	100.00%		L0P8Y6              	100.00%
Bootstrap support for F6R5Z2 as seed ortholog is 100%.
Bootstrap support for L0P8Y6 as seed ortholog is 100%.

Group of orthologs #120. Best score 649 bits
Score difference with first non-orthologous sequence - C.jacchus:649 P.jiroveci:649

F6UP74              	100.00%		L0PEQ8              	100.00%
F7IIG0              	46.18%		
F7IG21              	36.46%		
Bootstrap support for F6UP74 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #121. Best score 641 bits
Score difference with first non-orthologous sequence - C.jacchus:641 P.jiroveci:641

F6Z9N1              	100.00%		L0PDG3              	100.00%
F6Q4X4              	71.58%		
Bootstrap support for F6Z9N1 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #122. Best score 641 bits
Score difference with first non-orthologous sequence - C.jacchus:503 P.jiroveci:641

F7IN44              	100.00%		L0PGS4              	100.00%
F7IN22              	30.05%		
Bootstrap support for F7IN44 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #123. Best score 637 bits
Score difference with first non-orthologous sequence - C.jacchus:186 P.jiroveci:637

F7F433              	100.00%		L0PBN5              	100.00%
Bootstrap support for F7F433 as seed ortholog is 99%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #124. Best score 634 bits
Score difference with first non-orthologous sequence - C.jacchus:368 P.jiroveci:634

F6R4M4              	100.00%		L0PD31              	100.00%
Bootstrap support for F6R4M4 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #125. Best score 632 bits
Score difference with first non-orthologous sequence - C.jacchus:142 P.jiroveci:170

F6RCP4              	100.00%		L0P9U6              	100.00%
Bootstrap support for F6RCP4 as seed ortholog is 99%.
Bootstrap support for L0P9U6 as seed ortholog is 99%.

Group of orthologs #126. Best score 630 bits
Score difference with first non-orthologous sequence - C.jacchus:630 P.jiroveci:630

A0SXL6              	100.00%		L0P8C8              	100.00%
Bootstrap support for A0SXL6 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 100%.

Group of orthologs #127. Best score 628 bits
Score difference with first non-orthologous sequence - C.jacchus:187 P.jiroveci:628

F6TZT1              	100.00%		L0PDJ1              	100.00%
Bootstrap support for F6TZT1 as seed ortholog is 99%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #128. Best score 628 bits
Score difference with first non-orthologous sequence - C.jacchus:293 P.jiroveci:628

F7GVT0              	100.00%		L0PEP7              	100.00%
Bootstrap support for F7GVT0 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #129. Best score 626 bits
Score difference with first non-orthologous sequence - C.jacchus:321 P.jiroveci:315

F7IBZ3              	100.00%		L0P8L4              	100.00%
F6RWS8              	42.60%		
Bootstrap support for F7IBZ3 as seed ortholog is 99%.
Bootstrap support for L0P8L4 as seed ortholog is 100%.

Group of orthologs #130. Best score 621 bits
Score difference with first non-orthologous sequence - C.jacchus:533 P.jiroveci:621

F6Y7A9              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	93.66%
Bootstrap support for F6Y7A9 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #131. Best score 617 bits
Score difference with first non-orthologous sequence - C.jacchus:353 P.jiroveci:499

F7I994              	100.00%		L0P8E7              	100.00%
F7IEM0              	7.15%		
Bootstrap support for F7I994 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #132. Best score 616 bits
Score difference with first non-orthologous sequence - C.jacchus:616 P.jiroveci:616

F7HZR9              	100.00%		L0PF80              	100.00%
Bootstrap support for F7HZR9 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #133. Best score 613 bits
Score difference with first non-orthologous sequence - C.jacchus:613 P.jiroveci:613

F6TFZ0              	100.00%		L0PDM6              	100.00%
Bootstrap support for F6TFZ0 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #134. Best score 612 bits
Score difference with first non-orthologous sequence - C.jacchus:394 P.jiroveci:612

F7HBN8              	100.00%		L0PG07              	100.00%
Bootstrap support for F7HBN8 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #135. Best score 611 bits
Score difference with first non-orthologous sequence - C.jacchus:331 P.jiroveci:364

F6T7K6              	100.00%		L0PFW1              	100.00%
F7C693              	70.66%		
F7DPP1              	69.86%		
F7GMY5              	62.41%		
Bootstrap support for F6T7K6 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 100%.

Group of orthologs #136. Best score 610 bits
Score difference with first non-orthologous sequence - C.jacchus:610 P.jiroveci:610

F7HLD8              	100.00%		L0PAX4              	100.00%
Bootstrap support for F7HLD8 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #137. Best score 607 bits
Score difference with first non-orthologous sequence - C.jacchus:361 P.jiroveci:607

F6TA66              	100.00%		L0PAR0              	100.00%
F6T9C0              	55.45%		
Bootstrap support for F6TA66 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #138. Best score 607 bits
Score difference with first non-orthologous sequence - C.jacchus:607 P.jiroveci:607

F6QFM5              	100.00%		L0PBN0              	100.00%
Bootstrap support for F6QFM5 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #139. Best score 602 bits
Score difference with first non-orthologous sequence - C.jacchus:237 P.jiroveci:432

F7HLS0              	100.00%		L0P850              	100.00%
Bootstrap support for F7HLS0 as seed ortholog is 99%.
Bootstrap support for L0P850 as seed ortholog is 100%.

Group of orthologs #140. Best score 601 bits
Score difference with first non-orthologous sequence - C.jacchus:503 P.jiroveci:601

F7H194              	100.00%		L0P7N3              	100.00%
F7EC54              	66.10%		
Bootstrap support for F7H194 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #141. Best score 599 bits
Score difference with first non-orthologous sequence - C.jacchus:599 P.jiroveci:599

B0KWH8              	100.00%		L0PCT1              	100.00%
Bootstrap support for B0KWH8 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #142. Best score 598 bits
Score difference with first non-orthologous sequence - C.jacchus:598 P.jiroveci:598

F6STR2              	100.00%		L0P7T0              	100.00%
Bootstrap support for F6STR2 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #143. Best score 597 bits
Score difference with first non-orthologous sequence - C.jacchus:363 P.jiroveci:479

F7A1Y0              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	55.04%
Bootstrap support for F7A1Y0 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #144. Best score 596 bits
Score difference with first non-orthologous sequence - C.jacchus:596 P.jiroveci:596

F7D5V5              	100.00%		L0PB96              	100.00%
Bootstrap support for F7D5V5 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #145. Best score 589 bits
Score difference with first non-orthologous sequence - C.jacchus:32 P.jiroveci:209

F6V3B9              	100.00%		L0PBH4              	100.00%
F7HXZ7              	47.37%		
Bootstrap support for F6V3B9 as seed ortholog is 90%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #146. Best score 589 bits
Score difference with first non-orthologous sequence - C.jacchus:273 P.jiroveci:249

F7GFQ2              	100.00%		L0PEK2              	100.00%
Bootstrap support for F7GFQ2 as seed ortholog is 99%.
Bootstrap support for L0PEK2 as seed ortholog is 100%.

Group of orthologs #147. Best score 587 bits
Score difference with first non-orthologous sequence - C.jacchus:170 P.jiroveci:468

F7AL37              	100.00%		L0PDY0              	100.00%
F7IPC4              	71.47%		
H9KY92              	63.01%		
F6R4G5              	57.86%		
Bootstrap support for F7AL37 as seed ortholog is 99%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #148. Best score 587 bits
Score difference with first non-orthologous sequence - C.jacchus:587 P.jiroveci:587

F7I383              	100.00%		L0P917              	100.00%
                    	       		L0PF20              	85.70%
Bootstrap support for F7I383 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #149. Best score 584 bits
Score difference with first non-orthologous sequence - C.jacchus:584 P.jiroveci:584

F7F9K3              	100.00%		L0PFI9              	100.00%
Bootstrap support for F7F9K3 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #150. Best score 582 bits
Score difference with first non-orthologous sequence - C.jacchus:582 P.jiroveci:582

F6TI29              	100.00%		L0P958              	100.00%
Bootstrap support for F6TI29 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #151. Best score 579 bits
Score difference with first non-orthologous sequence - C.jacchus:579 P.jiroveci:579

F7DAA3              	100.00%		L0PA45              	100.00%
Bootstrap support for F7DAA3 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #152. Best score 578 bits
Score difference with first non-orthologous sequence - C.jacchus:578 P.jiroveci:578

F7CKJ0              	100.00%		L0PBV4              	100.00%
Bootstrap support for F7CKJ0 as seed ortholog is 100%.
Bootstrap support for L0PBV4 as seed ortholog is 100%.

Group of orthologs #153. Best score 578 bits
Score difference with first non-orthologous sequence - C.jacchus:578 P.jiroveci:578

F7G049              	100.00%		L0PHB7              	100.00%
Bootstrap support for F7G049 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #154. Best score 577 bits
Score difference with first non-orthologous sequence - C.jacchus:577 P.jiroveci:577

F7IP12              	100.00%		L0PES7              	100.00%
Bootstrap support for F7IP12 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #155. Best score 576 bits
Score difference with first non-orthologous sequence - C.jacchus:309 P.jiroveci:576

F6U7M9              	100.00%		L0PG32              	100.00%
H9KWV7              	16.37%		
Bootstrap support for F6U7M9 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #156. Best score 576 bits
Score difference with first non-orthologous sequence - C.jacchus:99 P.jiroveci:1

F6TES6              	100.00%		L0P9J9              	100.00%
Bootstrap support for F6TES6 as seed ortholog is 95%.
Bootstrap support for L0P9J9 as seed ortholog is 65%.
Alternative seed ortholog is L0PF72 (1 bits away from this cluster)

Group of orthologs #157. Best score 576 bits
Score difference with first non-orthologous sequence - C.jacchus:576 P.jiroveci:576

F7F407              	100.00%		L0PDR3              	100.00%
Bootstrap support for F7F407 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #158. Best score 576 bits
Score difference with first non-orthologous sequence - C.jacchus:576 P.jiroveci:576

F7IPE7              	100.00%		L0PDU2              	100.00%
Bootstrap support for F7IPE7 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #159. Best score 575 bits
Score difference with first non-orthologous sequence - C.jacchus:113 P.jiroveci:575

F7FPD9              	100.00%		L0PBW1              	100.00%
F7A9W1              	67.00%		
F6R2C3              	47.17%		
Bootstrap support for F7FPD9 as seed ortholog is 98%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #160. Best score 575 bits
Score difference with first non-orthologous sequence - C.jacchus:575 P.jiroveci:575

F6T242              	100.00%		L0PB97              	100.00%
F7H4J6              	54.86%		
Bootstrap support for F6T242 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #161. Best score 573 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:573

H9KYC2              	100.00%		L0P9D4              	100.00%
H9KXT3              	75.62%		
Bootstrap support for H9KYC2 as seed ortholog is 99%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #162. Best score 573 bits
Score difference with first non-orthologous sequence - C.jacchus:573 P.jiroveci:573

F6V3P2              	100.00%		L0P9S1              	100.00%
Bootstrap support for F6V3P2 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #163. Best score 571 bits
Score difference with first non-orthologous sequence - C.jacchus:571 P.jiroveci:571

F7H692              	100.00%		L0PDD5              	100.00%
Bootstrap support for F7H692 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #164. Best score 569 bits
Score difference with first non-orthologous sequence - C.jacchus:569 P.jiroveci:569

F7A408              	100.00%		L0PBM4              	100.00%
F7IP15              	13.60%		
Bootstrap support for F7A408 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #165. Best score 567 bits
Score difference with first non-orthologous sequence - C.jacchus:567 P.jiroveci:567

F6RHW0              	100.00%		L0PCA7              	100.00%
Bootstrap support for F6RHW0 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #166. Best score 567 bits
Score difference with first non-orthologous sequence - C.jacchus:567 P.jiroveci:387

F7FH46              	100.00%		L0PCD8              	100.00%
Bootstrap support for F7FH46 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #167. Best score 566 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:566

F7I5R6              	100.00%		L0PG37              	100.00%
F6QFR5              	36.90%		
F7GS26              	9.46%		
F7HW73              	8.53%		
B0KWL0              	7.44%		
Bootstrap support for F7I5R6 as seed ortholog is 99%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #168. Best score 565 bits
Score difference with first non-orthologous sequence - C.jacchus:565 P.jiroveci:565

F7IAX3              	100.00%		L0PA85              	100.00%
Bootstrap support for F7IAX3 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #169. Best score 564 bits
Score difference with first non-orthologous sequence - C.jacchus:564 P.jiroveci:564

F7EL11              	100.00%		L0PCV7              	100.00%
Bootstrap support for F7EL11 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #170. Best score 561 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:27

F7I5Y2              	100.00%		L0PGY9              	100.00%
F7GTK7              	48.00%		
Bootstrap support for F7I5Y2 as seed ortholog is 97%.
Bootstrap support for L0PGY9 as seed ortholog is 74%.
Alternative seed ortholog is L0PCK5 (27 bits away from this cluster)

Group of orthologs #171. Best score 553 bits
Score difference with first non-orthologous sequence - C.jacchus:265 P.jiroveci:427

F7A5A9              	100.00%		L0PC64              	100.00%
Bootstrap support for F7A5A9 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 100%.

Group of orthologs #172. Best score 552 bits
Score difference with first non-orthologous sequence - C.jacchus:271 P.jiroveci:197

F6UCH7              	100.00%		L0P7D9              	100.00%
F6XZ20              	90.10%		
Bootstrap support for F6UCH7 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #173. Best score 545 bits
Score difference with first non-orthologous sequence - C.jacchus:341 P.jiroveci:545

F6S883              	100.00%		L0PGT9              	100.00%
F6WFX3              	16.18%		
Bootstrap support for F6S883 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #174. Best score 545 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:545

F6ZD76              	100.00%		L0PA75              	100.00%
Bootstrap support for F6ZD76 as seed ortholog is 99%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #175. Best score 543 bits
Score difference with first non-orthologous sequence - C.jacchus:543 P.jiroveci:543

F7H9E5              	100.00%		L0P9U3              	100.00%
Bootstrap support for F7H9E5 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #176. Best score 543 bits
Score difference with first non-orthologous sequence - C.jacchus:435 P.jiroveci:467

H9KW86              	100.00%		L0PCS2              	100.00%
Bootstrap support for H9KW86 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #177. Best score 537 bits
Score difference with first non-orthologous sequence - C.jacchus:173 P.jiroveci:537

F6SLD2              	100.00%		L0P802              	100.00%
F6XXQ5              	93.42%		
F6YMI1              	56.30%		
F7GR01              	42.05%		
F7I8X7              	34.66%		
Bootstrap support for F6SLD2 as seed ortholog is 99%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #178. Best score 536 bits
Score difference with first non-orthologous sequence - C.jacchus:536 P.jiroveci:536

F7HSG9              	100.00%		L0PCP1              	100.00%
Bootstrap support for F7HSG9 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #179. Best score 535 bits
Score difference with first non-orthologous sequence - C.jacchus:535 P.jiroveci:535

F6R809              	100.00%		L0P6X8              	100.00%
Bootstrap support for F6R809 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #180. Best score 534 bits
Score difference with first non-orthologous sequence - C.jacchus:187 P.jiroveci:534

F7HYI2              	100.00%		L0P905              	100.00%
F7IAW5              	24.36%		
F7I1G5              	23.13%		
F7IAT1              	16.83%		
F7GAB2              	11.28%		
F7H8G0              	8.85%		
F6UPS3              	6.50%		
F7IKS6              	5.86%		
Bootstrap support for F7HYI2 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #181. Best score 534 bits
Score difference with first non-orthologous sequence - C.jacchus:534 P.jiroveci:534

F7F996              	100.00%		L0PBR9              	100.00%
F7DH88              	60.15%		
F7BPC6              	30.83%		
Bootstrap support for F7F996 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #182. Best score 534 bits
Score difference with first non-orthologous sequence - C.jacchus:534 P.jiroveci:534

F7AS85              	100.00%		L0PEZ0              	100.00%
Bootstrap support for F7AS85 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #183. Best score 532 bits
Score difference with first non-orthologous sequence - C.jacchus:395 P.jiroveci:480

F7CR49              	100.00%		L0PBU6              	100.00%
Bootstrap support for F7CR49 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #184. Best score 531 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:531

F7GM73              	100.00%		L0PB12              	100.00%
Bootstrap support for F7GM73 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #185. Best score 530 bits
Score difference with first non-orthologous sequence - C.jacchus:339 P.jiroveci:530

F7GNE6              	100.00%		L0P7Y5              	100.00%
Bootstrap support for F7GNE6 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #186. Best score 524 bits
Score difference with first non-orthologous sequence - C.jacchus:300 P.jiroveci:524

F7FSU9              	100.00%		L0P9I8              	100.00%
F7BKJ4              	73.64%		
F7GZL7              	5.30%		
Bootstrap support for F7FSU9 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #187. Best score 521 bits
Score difference with first non-orthologous sequence - C.jacchus:299 P.jiroveci:400

F7EJ02              	100.00%		L0PEP2              	100.00%
Bootstrap support for F7EJ02 as seed ortholog is 100%.
Bootstrap support for L0PEP2 as seed ortholog is 100%.

Group of orthologs #188. Best score 521 bits
Score difference with first non-orthologous sequence - C.jacchus:521 P.jiroveci:521

F7IQ83              	100.00%		L0PEA0              	100.00%
Bootstrap support for F7IQ83 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #189. Best score 520 bits
Score difference with first non-orthologous sequence - C.jacchus:269 P.jiroveci:520

F7HJX4              	100.00%		L0PET9              	100.00%
F7CVY0              	81.27%		
Bootstrap support for F7HJX4 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #190. Best score 519 bits
Score difference with first non-orthologous sequence - C.jacchus:354 P.jiroveci:519

F6PM06              	100.00%		L0PBI1              	100.00%
F7IPW8              	49.43%		
F7IPT8              	42.98%		
F7HBE9              	16.39%		
Bootstrap support for F6PM06 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #191. Best score 518 bits
Score difference with first non-orthologous sequence - C.jacchus:195 P.jiroveci:401

F7FRF3              	100.00%		L0P7V6              	100.00%
F7IJ34              	44.21%		
F6RDI2              	25.26%		
Bootstrap support for F7FRF3 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 100%.

Group of orthologs #192. Best score 518 bits
Score difference with first non-orthologous sequence - C.jacchus:518 P.jiroveci:518

F7IAE4              	100.00%		L0PAN9              	100.00%
                    	       		L0PID8              	82.95%
Bootstrap support for F7IAE4 as seed ortholog is 100%.
Bootstrap support for L0PAN9 as seed ortholog is 100%.

Group of orthologs #193. Best score 516 bits
Score difference with first non-orthologous sequence - C.jacchus:253 P.jiroveci:516

F6SDI3              	100.00%		L0P718              	100.00%
Bootstrap support for F6SDI3 as seed ortholog is 100%.
Bootstrap support for L0P718 as seed ortholog is 100%.

Group of orthologs #194. Best score 516 bits
Score difference with first non-orthologous sequence - C.jacchus:516 P.jiroveci:516

F6U037              	100.00%		L0P8W6              	100.00%
Bootstrap support for F6U037 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #195. Best score 514 bits
Score difference with first non-orthologous sequence - C.jacchus:514 P.jiroveci:514

F7G686              	100.00%		L0P7V2              	100.00%
Bootstrap support for F7G686 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #196. Best score 512 bits
Score difference with first non-orthologous sequence - C.jacchus:265 P.jiroveci:512

F7ALT1              	100.00%		L0PBP3              	100.00%
F6RF95              	58.39%		
Bootstrap support for F7ALT1 as seed ortholog is 100%.
Bootstrap support for L0PBP3 as seed ortholog is 100%.

Group of orthologs #197. Best score 512 bits
Score difference with first non-orthologous sequence - C.jacchus:512 P.jiroveci:512

F7I9V4              	100.00%		L0PAS3              	100.00%
F7HZ57              	33.78%		
Bootstrap support for F7I9V4 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #198. Best score 512 bits
Score difference with first non-orthologous sequence - C.jacchus:512 P.jiroveci:512

F7BW16              	100.00%		L0PCX1              	100.00%
Bootstrap support for F7BW16 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #199. Best score 510 bits
Score difference with first non-orthologous sequence - C.jacchus:510 P.jiroveci:510

F6RMD2              	100.00%		L0P8G2              	100.00%
Bootstrap support for F6RMD2 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #200. Best score 509 bits
Score difference with first non-orthologous sequence - C.jacchus:203 P.jiroveci:283

F7GFQ6              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for F7GFQ6 as seed ortholog is 100%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #201. Best score 508 bits
Score difference with first non-orthologous sequence - C.jacchus:346 P.jiroveci:508

F7IPL5              	100.00%		L0PAA4              	100.00%
F7ARU6              	40.79%		
Bootstrap support for F7IPL5 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #202. Best score 508 bits
Score difference with first non-orthologous sequence - C.jacchus:508 P.jiroveci:508

F7B5V5              	100.00%		L0PGE8              	100.00%
Bootstrap support for F7B5V5 as seed ortholog is 100%.
Bootstrap support for L0PGE8 as seed ortholog is 100%.

Group of orthologs #203. Best score 508 bits
Score difference with first non-orthologous sequence - C.jacchus:508 P.jiroveci:508

F7IQ52              	100.00%		L0PBG8              	100.00%
Bootstrap support for F7IQ52 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #204. Best score 507 bits
Score difference with first non-orthologous sequence - C.jacchus:507 P.jiroveci:457

F6YTG3              	100.00%		L0P7R1              	100.00%
Bootstrap support for F6YTG3 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #205. Best score 505 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:505

F6QGF4              	100.00%		L0P890              	100.00%
F6U098              	56.08%		
Bootstrap support for F6QGF4 as seed ortholog is 93%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #206. Best score 505 bits
Score difference with first non-orthologous sequence - C.jacchus:505 P.jiroveci:505

F7EMQ2              	100.00%		L0P8Z9              	100.00%
Bootstrap support for F7EMQ2 as seed ortholog is 100%.
Bootstrap support for L0P8Z9 as seed ortholog is 100%.

Group of orthologs #207. Best score 505 bits
Score difference with first non-orthologous sequence - C.jacchus:396 P.jiroveci:505

F7H4T9              	100.00%		L0PDG5              	100.00%
Bootstrap support for F7H4T9 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #208. Best score 505 bits
Score difference with first non-orthologous sequence - C.jacchus:413 P.jiroveci:505

F7I3B0              	100.00%		L0PB50              	100.00%
Bootstrap support for F7I3B0 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #209. Best score 504 bits
Score difference with first non-orthologous sequence - C.jacchus:301 P.jiroveci:504

F6QCY0              	100.00%		L0P7N1              	100.00%
F6QLL8              	83.06%		
Bootstrap support for F6QCY0 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #210. Best score 502 bits
Score difference with first non-orthologous sequence - C.jacchus:403 P.jiroveci:502

F7CCZ4              	100.00%		L0PAC4              	100.00%
                    	       		L0P871              	98.17%
Bootstrap support for F7CCZ4 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 100%.

Group of orthologs #211. Best score 502 bits
Score difference with first non-orthologous sequence - C.jacchus:365 P.jiroveci:502

F6TX63              	100.00%		L0PFQ5              	100.00%
Bootstrap support for F6TX63 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #212. Best score 502 bits
Score difference with first non-orthologous sequence - C.jacchus:502 P.jiroveci:502

F7HLG0              	100.00%		L0PFM4              	100.00%
Bootstrap support for F7HLG0 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #213. Best score 500 bits
Score difference with first non-orthologous sequence - C.jacchus:424 P.jiroveci:436

F6XRN1              	100.00%		L0P992              	100.00%
F6SC17              	78.66%		
F7GS51              	76.61%		
F7IGY4              	73.01%		
Bootstrap support for F6XRN1 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #214. Best score 499 bits
Score difference with first non-orthologous sequence - C.jacchus:499 P.jiroveci:499

F7GRS3              	100.00%		L0P8P8              	100.00%
Bootstrap support for F7GRS3 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #215. Best score 498 bits
Score difference with first non-orthologous sequence - C.jacchus:498 P.jiroveci:498

F7BAU7              	100.00%		L0PAL6              	100.00%
Bootstrap support for F7BAU7 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #216. Best score 495 bits
Score difference with first non-orthologous sequence - C.jacchus:312 P.jiroveci:276

F6ZPA8              	100.00%		L0PF08              	100.00%
F7GI67              	70.19%		
F6ZW57              	60.85%		
Bootstrap support for F6ZPA8 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #217. Best score 495 bits
Score difference with first non-orthologous sequence - C.jacchus:495 P.jiroveci:495

F7AQD4              	100.00%		L0PFZ9              	100.00%
F6V8N7              	32.02%		
Bootstrap support for F7AQD4 as seed ortholog is 100%.
Bootstrap support for L0PFZ9 as seed ortholog is 100%.

Group of orthologs #218. Best score 495 bits
Score difference with first non-orthologous sequence - C.jacchus:495 P.jiroveci:495

F6WDN3              	100.00%		L0P7P1              	100.00%
Bootstrap support for F6WDN3 as seed ortholog is 100%.
Bootstrap support for L0P7P1 as seed ortholog is 100%.

Group of orthologs #219. Best score 494 bits
Score difference with first non-orthologous sequence - C.jacchus:494 P.jiroveci:494

F7H1U6              	100.00%		L0PC09              	100.00%
Bootstrap support for F7H1U6 as seed ortholog is 100%.
Bootstrap support for L0PC09 as seed ortholog is 100%.

Group of orthologs #220. Best score 493 bits
Score difference with first non-orthologous sequence - C.jacchus:493 P.jiroveci:493

F7GGA2              	100.00%		L0P8F1              	100.00%
F6Z1U9              	54.23%		
F7GGA9              	51.53%		
F7HDT3              	50.99%		
Bootstrap support for F7GGA2 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #221. Best score 492 bits
Score difference with first non-orthologous sequence - C.jacchus:209 P.jiroveci:267

F6X412              	100.00%		L0PAW8              	100.00%
F7HJU0              	11.58%		
F7CWM2              	5.53%		
Bootstrap support for F6X412 as seed ortholog is 99%.
Bootstrap support for L0PAW8 as seed ortholog is 99%.

Group of orthologs #222. Best score 490 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:53

F7IQ55              	100.00%		L0PAI4              	100.00%
F7BX81              	58.62%		
F7I0R0              	57.99%		
Bootstrap support for F7IQ55 as seed ortholog is 100%.
Bootstrap support for L0PAI4 as seed ortholog is 84%.

Group of orthologs #223. Best score 490 bits
Score difference with first non-orthologous sequence - C.jacchus:357 P.jiroveci:369

F7I6P7              	100.00%		L0PE30              	100.00%
F6RBB4              	35.29%		
Bootstrap support for F7I6P7 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #224. Best score 490 bits
Score difference with first non-orthologous sequence - C.jacchus:490 P.jiroveci:313

F7GMY3              	100.00%		L0PFN9              	100.00%
Bootstrap support for F7GMY3 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #225. Best score 488 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:488

F7IMS0              	100.00%		L0P9G2              	100.00%
Bootstrap support for F7IMS0 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #226. Best score 487 bits
Score difference with first non-orthologous sequence - C.jacchus:487 P.jiroveci:487

F6PUY3              	100.00%		L0PEL0              	100.00%
Bootstrap support for F6PUY3 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #227. Best score 487 bits
Score difference with first non-orthologous sequence - C.jacchus:487 P.jiroveci:487

F7E2I5              	100.00%		L0PAP1              	100.00%
Bootstrap support for F7E2I5 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #228. Best score 486 bits
Score difference with first non-orthologous sequence - C.jacchus:305 P.jiroveci:486

F7H699              	100.00%		L0P6T3              	100.00%
F7GYN9              	39.90%		
Bootstrap support for F7H699 as seed ortholog is 100%.
Bootstrap support for L0P6T3 as seed ortholog is 100%.

Group of orthologs #229. Best score 486 bits
Score difference with first non-orthologous sequence - C.jacchus:486 P.jiroveci:486

F7I5N8              	100.00%		L0PB35              	100.00%
F7AW79              	32.52%		
Bootstrap support for F7I5N8 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #230. Best score 486 bits
Score difference with first non-orthologous sequence - C.jacchus:335 P.jiroveci:395

F6QGU6              	100.00%		L0PG55              	100.00%
Bootstrap support for F6QGU6 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #231. Best score 480 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:215

F7EAI8              	100.00%		L0PHY6              	100.00%
Bootstrap support for F7EAI8 as seed ortholog is 99%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #232. Best score 478 bits
Score difference with first non-orthologous sequence - C.jacchus:478 P.jiroveci:478

F6RHX6              	100.00%		L0PCY5              	100.00%
F7I7A3              	46.01%		
Bootstrap support for F6RHX6 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #233. Best score 478 bits
Score difference with first non-orthologous sequence - C.jacchus:262 P.jiroveci:347

F7EI23              	100.00%		L0PC38              	100.00%
Bootstrap support for F7EI23 as seed ortholog is 100%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #234. Best score 477 bits
Score difference with first non-orthologous sequence - C.jacchus:359 P.jiroveci:477

F7G5F3              	100.00%		L0PGH3              	100.00%
F6QPH5              	39.77%		
Bootstrap support for F7G5F3 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #235. Best score 476 bits
Score difference with first non-orthologous sequence - C.jacchus:383 P.jiroveci:476

F7HAG7              	100.00%		L0P921              	100.00%
Bootstrap support for F7HAG7 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #236. Best score 472 bits
Score difference with first non-orthologous sequence - C.jacchus:331 P.jiroveci:472

F7HBT7              	100.00%		L0P6Y2              	100.00%
Bootstrap support for F7HBT7 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #237. Best score 470 bits
Score difference with first non-orthologous sequence - C.jacchus:317 P.jiroveci:363

F7GHQ8              	100.00%		L0P8C2              	100.00%
Bootstrap support for F7GHQ8 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #238. Best score 470 bits
Score difference with first non-orthologous sequence - C.jacchus:470 P.jiroveci:470

F7H0E8              	100.00%		L0PFC2              	100.00%
Bootstrap support for F7H0E8 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #239. Best score 468 bits
Score difference with first non-orthologous sequence - C.jacchus:208 P.jiroveci:99

F6S3M7              	100.00%		L0PFW2              	100.00%
Bootstrap support for F6S3M7 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 99%.

Group of orthologs #240. Best score 467 bits
Score difference with first non-orthologous sequence - C.jacchus:424 P.jiroveci:467

F7IDQ4              	100.00%		L0P9V7              	100.00%
F7G9S1              	38.47%		
Bootstrap support for F7IDQ4 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #241. Best score 467 bits
Score difference with first non-orthologous sequence - C.jacchus:314 P.jiroveci:235

F7A2G4              	100.00%		L0PC99              	100.00%
Bootstrap support for F7A2G4 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #242. Best score 467 bits
Score difference with first non-orthologous sequence - C.jacchus:467 P.jiroveci:467

F7DDR2              	100.00%		L0PCS3              	100.00%
Bootstrap support for F7DDR2 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #243. Best score 466 bits
Score difference with first non-orthologous sequence - C.jacchus:333 P.jiroveci:466

F7EYY0              	100.00%		L0P8N1              	100.00%
Bootstrap support for F7EYY0 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #244. Best score 466 bits
Score difference with first non-orthologous sequence - C.jacchus:185 P.jiroveci:336

F7IA02              	100.00%		L0PB67              	100.00%
Bootstrap support for F7IA02 as seed ortholog is 99%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #245. Best score 465 bits
Score difference with first non-orthologous sequence - C.jacchus:465 P.jiroveci:465

F7IAM6              	100.00%		L0PG96              	100.00%
Bootstrap support for F7IAM6 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #246. Best score 464 bits
Score difference with first non-orthologous sequence - C.jacchus:407 P.jiroveci:464

F6QUM6              	100.00%		L0P9C8              	100.00%
Bootstrap support for F6QUM6 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #247. Best score 460 bits
Score difference with first non-orthologous sequence - C.jacchus:460 P.jiroveci:460

F7IKK8              	100.00%		L0PBV8              	100.00%
Bootstrap support for F7IKK8 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #248. Best score 459 bits
Score difference with first non-orthologous sequence - C.jacchus:298 P.jiroveci:319

F7GQJ6              	100.00%		L0PDA0              	100.00%
F7IQR8              	52.81%		
Bootstrap support for F7GQJ6 as seed ortholog is 100%.
Bootstrap support for L0PDA0 as seed ortholog is 100%.

Group of orthologs #249. Best score 456 bits
Score difference with first non-orthologous sequence - C.jacchus:456 P.jiroveci:456

F7FQ53              	100.00%		L0PBT8              	100.00%
Bootstrap support for F7FQ53 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #250. Best score 454 bits
Score difference with first non-orthologous sequence - C.jacchus:454 P.jiroveci:454

F6UT64              	100.00%		L0PC82              	100.00%
F6ZK24              	29.28%		
Bootstrap support for F6UT64 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #251. Best score 453 bits
Score difference with first non-orthologous sequence - C.jacchus:453 P.jiroveci:453

F7B447              	100.00%		L0P9C9              	100.00%
Bootstrap support for F7B447 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #252. Best score 453 bits
Score difference with first non-orthologous sequence - C.jacchus:453 P.jiroveci:453

F7IPS1              	100.00%		L0PER3              	100.00%
Bootstrap support for F7IPS1 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #253. Best score 450 bits
Score difference with first non-orthologous sequence - C.jacchus:228 P.jiroveci:336

F7INX1              	100.00%		L0PEM1              	100.00%
Bootstrap support for F7INX1 as seed ortholog is 100%.
Bootstrap support for L0PEM1 as seed ortholog is 100%.

Group of orthologs #254. Best score 447 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:447

F6SB64              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	77.78%
Bootstrap support for F6SB64 as seed ortholog is 90%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.

Group of orthologs #255. Best score 446 bits
Score difference with first non-orthologous sequence - C.jacchus:446 P.jiroveci:446

F7ELZ1              	100.00%		L0PBN1              	100.00%
Bootstrap support for F7ELZ1 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #256. Best score 446 bits
Score difference with first non-orthologous sequence - C.jacchus:446 P.jiroveci:446

F7IQI6              	100.00%		L0PCL9              	100.00%
Bootstrap support for F7IQI6 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #257. Best score 445 bits
Score difference with first non-orthologous sequence - C.jacchus:445 P.jiroveci:445

F6PQV9              	100.00%		L0PF49              	100.00%
Bootstrap support for F6PQV9 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #258. Best score 444 bits
Score difference with first non-orthologous sequence - C.jacchus:444 P.jiroveci:214

F6W1R9              	100.00%		L0P6T8              	100.00%
F7DI41              	51.67%		
F7IN25              	33.12%		
Bootstrap support for F6W1R9 as seed ortholog is 100%.
Bootstrap support for L0P6T8 as seed ortholog is 100%.

Group of orthologs #259. Best score 444 bits
Score difference with first non-orthologous sequence - C.jacchus:444 P.jiroveci:444

F7GCL4              	100.00%		L0PGB8              	100.00%
Bootstrap support for F7GCL4 as seed ortholog is 100%.
Bootstrap support for L0PGB8 as seed ortholog is 100%.

Group of orthologs #260. Best score 444 bits
Score difference with first non-orthologous sequence - C.jacchus:444 P.jiroveci:444

F7IJ02              	100.00%		L0PDS0              	100.00%
Bootstrap support for F7IJ02 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #261. Best score 442 bits
Score difference with first non-orthologous sequence - C.jacchus:289 P.jiroveci:329

F7CQP3              	100.00%		L0PHE4              	100.00%
F7GSR6              	85.85%		
Bootstrap support for F7CQP3 as seed ortholog is 100%.
Bootstrap support for L0PHE4 as seed ortholog is 100%.

Group of orthologs #262. Best score 442 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:442

F7I1N2              	100.00%		L0PCE9              	100.00%
Bootstrap support for F7I1N2 as seed ortholog is 99%.
Bootstrap support for L0PCE9 as seed ortholog is 100%.

Group of orthologs #263. Best score 440 bits
Score difference with first non-orthologous sequence - C.jacchus:440 P.jiroveci:440

F7HDC4              	100.00%		L0P7D2              	100.00%
F7HVL9              	15.97%		
Bootstrap support for F7HDC4 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #264. Best score 440 bits
Score difference with first non-orthologous sequence - C.jacchus:440 P.jiroveci:440

F6QBI2              	100.00%		L0P9I4              	100.00%
Bootstrap support for F6QBI2 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #265. Best score 440 bits
Score difference with first non-orthologous sequence - C.jacchus:281 P.jiroveci:350

F7IAV9              	100.00%		L0PC98              	100.00%
Bootstrap support for F7IAV9 as seed ortholog is 100%.
Bootstrap support for L0PC98 as seed ortholog is 100%.

Group of orthologs #266. Best score 439 bits
Score difference with first non-orthologous sequence - C.jacchus:266 P.jiroveci:350

F7I592              	100.00%		L0PAL3              	100.00%
F7DNQ1              	31.77%		
F7IHE6              	30.44%		
Bootstrap support for F7I592 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #267. Best score 439 bits
Score difference with first non-orthologous sequence - C.jacchus:136 P.jiroveci:439

F7HI18              	100.00%		L0PE41              	100.00%
F7F9Y4              	20.71%		
Bootstrap support for F7HI18 as seed ortholog is 98%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #268. Best score 438 bits
Score difference with first non-orthologous sequence - C.jacchus:196 P.jiroveci:366

F7IRM3              	100.00%		L0PFB1              	100.00%
F7AX19              	50.51%		
Bootstrap support for F7IRM3 as seed ortholog is 100%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #269. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:259 P.jiroveci:436

F6RZH3              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for F6RZH3 as seed ortholog is 100%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #270. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:184 P.jiroveci:436

F7FFJ5              	100.00%		L0PGN1              	100.00%
F7I6V1              	11.70%		
Bootstrap support for F7FFJ5 as seed ortholog is 99%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #271. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:123 P.jiroveci:290

F7IPJ9              	100.00%		L0PGV4              	100.00%
F6QFY6              	86.83%		
Bootstrap support for F7IPJ9 as seed ortholog is 99%.
Bootstrap support for L0PGV4 as seed ortholog is 100%.

Group of orthologs #272. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:436 P.jiroveci:436

F7D1S0              	100.00%		L0P969              	100.00%
Bootstrap support for F7D1S0 as seed ortholog is 100%.
Bootstrap support for L0P969 as seed ortholog is 100%.

Group of orthologs #273. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:344 P.jiroveci:352

F7GNQ7              	100.00%		L0PFE7              	100.00%
Bootstrap support for F7GNQ7 as seed ortholog is 100%.
Bootstrap support for L0PFE7 as seed ortholog is 100%.

Group of orthologs #274. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:347 P.jiroveci:436

F7IG99              	100.00%		L0PDH7              	100.00%
Bootstrap support for F7IG99 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #275. Best score 435 bits
Score difference with first non-orthologous sequence - C.jacchus:26 P.jiroveci:435

F7I4L6              	100.00%		L0P9H5              	100.00%
F7GJ11              	58.56%		L0P8S4              	54.09%
F7GMK8              	54.56%		
F7HD36              	12.82%		
F7IL85              	10.77%		
F6ZHC0              	9.95%		
F6U9Y6              	9.33%		
Bootstrap support for F7I4L6 as seed ortholog is 92%.
Bootstrap support for L0P9H5 as seed ortholog is 100%.

Group of orthologs #276. Best score 435 bits
Score difference with first non-orthologous sequence - C.jacchus:21 P.jiroveci:435

F7IEH1              	100.00%		L0PFR4              	100.00%
F6Y8C6              	21.08%		
Bootstrap support for F7IEH1 as seed ortholog is 38%.
Alternative seed ortholog is F6Z0E7 (21 bits away from this cluster)
Bootstrap support for L0PFR4 as seed ortholog is 100%.

Group of orthologs #277. Best score 435 bits
Score difference with first non-orthologous sequence - C.jacchus:310 P.jiroveci:435

F7A0K5              	100.00%		L0PD24              	100.00%
Bootstrap support for F7A0K5 as seed ortholog is 100%.
Bootstrap support for L0PD24 as seed ortholog is 100%.

Group of orthologs #278. Best score 434 bits
Score difference with first non-orthologous sequence - C.jacchus:434 P.jiroveci:434

F6ZA23              	100.00%		L0PB32              	100.00%
F6XM41              	54.06%		
Bootstrap support for F6ZA23 as seed ortholog is 100%.
Bootstrap support for L0PB32 as seed ortholog is 100%.

Group of orthologs #279. Best score 434 bits
Score difference with first non-orthologous sequence - C.jacchus:434 P.jiroveci:434

F7GLL2              	100.00%		L0P6R7              	100.00%
Bootstrap support for F7GLL2 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #280. Best score 430 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:131

F7HVJ2              	100.00%		L0PGJ9              	100.00%
Bootstrap support for F7HVJ2 as seed ortholog is 85%.
Bootstrap support for L0PGJ9 as seed ortholog is 99%.

Group of orthologs #281. Best score 428 bits
Score difference with first non-orthologous sequence - C.jacchus:42 P.jiroveci:428

F7IAS4              	100.00%		L0PBL0              	100.00%
Bootstrap support for F7IAS4 as seed ortholog is 70%.
Alternative seed ortholog is F7D6U4 (42 bits away from this cluster)
Bootstrap support for L0PBL0 as seed ortholog is 100%.

Group of orthologs #282. Best score 428 bits
Score difference with first non-orthologous sequence - C.jacchus:329 P.jiroveci:428

F7ISQ5              	100.00%		L0PI36              	100.00%
Bootstrap support for F7ISQ5 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #283. Best score 427 bits
Score difference with first non-orthologous sequence - C.jacchus:427 P.jiroveci:427

F7GBL9              	100.00%		L0P9J7              	100.00%
Bootstrap support for F7GBL9 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #284. Best score 426 bits
Score difference with first non-orthologous sequence - C.jacchus:326 P.jiroveci:426

F6R482              	100.00%		L0PF52              	100.00%
F7BGK0              	67.58%		
Bootstrap support for F6R482 as seed ortholog is 100%.
Bootstrap support for L0PF52 as seed ortholog is 100%.

Group of orthologs #285. Best score 426 bits
Score difference with first non-orthologous sequence - C.jacchus:158 P.jiroveci:88

F6PNU4              	100.00%		L0PFS3              	100.00%
Bootstrap support for F6PNU4 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 99%.

Group of orthologs #286. Best score 426 bits
Score difference with first non-orthologous sequence - C.jacchus:426 P.jiroveci:426

F7G678              	100.00%		L0PAE9              	100.00%
Bootstrap support for F7G678 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #287. Best score 425 bits
Score difference with first non-orthologous sequence - C.jacchus:425 P.jiroveci:425

F6Q907              	100.00%		L0PEE3              	100.00%
F6ZA08              	91.67%		
F6QF99              	55.29%		
F7D9E4              	51.92%		
Bootstrap support for F6Q907 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #288. Best score 425 bits
Score difference with first non-orthologous sequence - C.jacchus:425 P.jiroveci:425

F7GQG2              	100.00%		L0PGU0              	100.00%
F7HV97              	95.91%		
Bootstrap support for F7GQG2 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #289. Best score 425 bits
Score difference with first non-orthologous sequence - C.jacchus:331 P.jiroveci:425

F7GYQ9              	100.00%		L0P7Z6              	100.00%
Bootstrap support for F7GYQ9 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #290. Best score 425 bits
Score difference with first non-orthologous sequence - C.jacchus:156 P.jiroveci:425

F7HC64              	100.00%		L0PFJ5              	100.00%
Bootstrap support for F7HC64 as seed ortholog is 99%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #291. Best score 422 bits
Score difference with first non-orthologous sequence - C.jacchus:422 P.jiroveci:422

F6QPU1              	100.00%		L0PG82              	100.00%
F7ILC7              	50.91%		
Bootstrap support for F6QPU1 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #292. Best score 422 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:422

F6SRU4              	100.00%		L0PAL8              	100.00%
Bootstrap support for F6SRU4 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #293. Best score 422 bits
Score difference with first non-orthologous sequence - C.jacchus:422 P.jiroveci:422

F7CB85              	100.00%		L0PAH2              	100.00%
Bootstrap support for F7CB85 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #294. Best score 421 bits
Score difference with first non-orthologous sequence - C.jacchus:421 P.jiroveci:421

F7IFZ2              	100.00%		L0P8X3              	100.00%
Bootstrap support for F7IFZ2 as seed ortholog is 100%.
Bootstrap support for L0P8X3 as seed ortholog is 100%.

Group of orthologs #295. Best score 421 bits
Score difference with first non-orthologous sequence - C.jacchus:421 P.jiroveci:421

H9KVW0              	100.00%		L0PFT7              	100.00%
Bootstrap support for H9KVW0 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #296. Best score 418 bits
Score difference with first non-orthologous sequence - C.jacchus:93 P.jiroveci:2

F7AIT2              	100.00%		L0PE81              	100.00%
F6V2T4              	56.94%		
F6VGN4              	55.18%		
Bootstrap support for F7AIT2 as seed ortholog is 99%.
Bootstrap support for L0PE81 as seed ortholog is 52%.
Alternative seed ortholog is L0PAN3 (2 bits away from this cluster)

Group of orthologs #297. Best score 418 bits
Score difference with first non-orthologous sequence - C.jacchus:418 P.jiroveci:418

F6VQ06              	100.00%		L0PEE4              	100.00%
F7IRE1              	26.91%		
Bootstrap support for F6VQ06 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #298. Best score 418 bits
Score difference with first non-orthologous sequence - C.jacchus:418 P.jiroveci:418

F7CH53              	100.00%		L0PDM0              	100.00%
F6YVT4              	53.57%		
Bootstrap support for F7CH53 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #299. Best score 418 bits
Score difference with first non-orthologous sequence - C.jacchus:121 P.jiroveci:418

F7BHS6              	100.00%		L0P8R6              	100.00%
Bootstrap support for F7BHS6 as seed ortholog is 99%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #300. Best score 415 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:228

F7HZU6              	100.00%		L0P6V9              	100.00%
F6S8X1              	83.64%		
F7GUH3              	81.31%		
Bootstrap support for F7HZU6 as seed ortholog is 99%.
Bootstrap support for L0P6V9 as seed ortholog is 100%.

Group of orthologs #301. Best score 415 bits
Score difference with first non-orthologous sequence - C.jacchus:233 P.jiroveci:415

B0KWT9              	100.00%		L0PG48              	100.00%
Bootstrap support for B0KWT9 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #302. Best score 415 bits
Score difference with first non-orthologous sequence - C.jacchus:275 P.jiroveci:415

F6V9Z0              	100.00%		L0PCN1              	100.00%
Bootstrap support for F6V9Z0 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #303. Best score 415 bits
Score difference with first non-orthologous sequence - C.jacchus:415 P.jiroveci:415

F7I834              	100.00%		L0PBE9              	100.00%
Bootstrap support for F7I834 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #304. Best score 413 bits
Score difference with first non-orthologous sequence - C.jacchus:413 P.jiroveci:356

F6ZL40              	100.00%		L0P7M4              	100.00%
F7GYR8              	75.46%		L0PH62              	49.37%
F7IBX2              	32.17%		
Bootstrap support for F6ZL40 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #305. Best score 411 bits
Score difference with first non-orthologous sequence - C.jacchus:411 P.jiroveci:411

F6TA24              	100.00%		L0PGA8              	100.00%
Bootstrap support for F6TA24 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #306. Best score 410 bits
Score difference with first non-orthologous sequence - C.jacchus:410 P.jiroveci:410

F6PH70              	100.00%		L0PEX5              	100.00%
Bootstrap support for F6PH70 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #307. Best score 410 bits
Score difference with first non-orthologous sequence - C.jacchus:410 P.jiroveci:410

F7FMZ1              	100.00%		L0P7S7              	100.00%
Bootstrap support for F7FMZ1 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #308. Best score 410 bits
Score difference with first non-orthologous sequence - C.jacchus:410 P.jiroveci:410

F7FS09              	100.00%		L0PF23              	100.00%
Bootstrap support for F7FS09 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #309. Best score 407 bits
Score difference with first non-orthologous sequence - C.jacchus:407 P.jiroveci:407

F7IT21              	100.00%		L0PAN7              	100.00%
Bootstrap support for F7IT21 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #310. Best score 406 bits
Score difference with first non-orthologous sequence - C.jacchus:184 P.jiroveci:406

F6SEL4              	100.00%		L0P702              	100.00%
F7ECF8              	37.31%		
Bootstrap support for F6SEL4 as seed ortholog is 100%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #311. Best score 406 bits
Score difference with first non-orthologous sequence - C.jacchus:245 P.jiroveci:406

F6T077              	100.00%		L0PDT0              	100.00%
Bootstrap support for F6T077 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #312. Best score 406 bits
Score difference with first non-orthologous sequence - C.jacchus:406 P.jiroveci:406

F7HVJ0              	100.00%		L0PIC6              	100.00%
Bootstrap support for F7HVJ0 as seed ortholog is 100%.
Bootstrap support for L0PIC6 as seed ortholog is 100%.

Group of orthologs #313. Best score 405 bits
Score difference with first non-orthologous sequence - C.jacchus:197 P.jiroveci:405

F6YP89              	100.00%		L0PBF6              	100.00%
F7I454              	39.19%		
Bootstrap support for F6YP89 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #314. Best score 405 bits
Score difference with first non-orthologous sequence - C.jacchus:138 P.jiroveci:405

F7HBU9              	100.00%		L0PCP3              	100.00%
Bootstrap support for F7HBU9 as seed ortholog is 99%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #315. Best score 404 bits
Score difference with first non-orthologous sequence - C.jacchus:404 P.jiroveci:404

F7GTF8              	100.00%		L0PE98              	100.00%
F6W630              	40.71%		
Bootstrap support for F7GTF8 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #316. Best score 404 bits
Score difference with first non-orthologous sequence - C.jacchus:125 P.jiroveci:404

F7DKG7              	100.00%		L0PCL4              	100.00%
Bootstrap support for F7DKG7 as seed ortholog is 98%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #317. Best score 404 bits
Score difference with first non-orthologous sequence - C.jacchus:404 P.jiroveci:404

F7HLN3              	100.00%		L0P8Z3              	100.00%
Bootstrap support for F7HLN3 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #318. Best score 403 bits
Score difference with first non-orthologous sequence - C.jacchus:226 P.jiroveci:403

F6UIU1              	100.00%		L0PGJ5              	100.00%
Bootstrap support for F6UIU1 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #319. Best score 403 bits
Score difference with first non-orthologous sequence - C.jacchus:160 P.jiroveci:403

F6ZCB1              	100.00%		L0PBM9              	100.00%
Bootstrap support for F6ZCB1 as seed ortholog is 99%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #320. Best score 403 bits
Score difference with first non-orthologous sequence - C.jacchus:167 P.jiroveci:403

F7FKQ7              	100.00%		L0PA15              	100.00%
Bootstrap support for F7FKQ7 as seed ortholog is 99%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #321. Best score 403 bits
Score difference with first non-orthologous sequence - C.jacchus:403 P.jiroveci:403

F7E1L8              	100.00%		L0PHJ7              	100.00%
Bootstrap support for F7E1L8 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #322. Best score 403 bits
Score difference with first non-orthologous sequence - C.jacchus:403 P.jiroveci:403

F7I2E9              	100.00%		L0PCQ7              	100.00%
Bootstrap support for F7I2E9 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #323. Best score 402 bits
Score difference with first non-orthologous sequence - C.jacchus:402 P.jiroveci:402

F7FFA1              	100.00%		L0PAB3              	100.00%
Bootstrap support for F7FFA1 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #324. Best score 399 bits
Score difference with first non-orthologous sequence - C.jacchus:271 P.jiroveci:310

F6PW72              	100.00%		L0PA57              	100.00%
Bootstrap support for F6PW72 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #325. Best score 399 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:399

F6YVA2              	100.00%		L0P6U6              	100.00%
Bootstrap support for F6YVA2 as seed ortholog is 95%.
Bootstrap support for L0P6U6 as seed ortholog is 100%.

Group of orthologs #326. Best score 399 bits
Score difference with first non-orthologous sequence - C.jacchus:163 P.jiroveci:399

F7ES97              	100.00%		L0PA13              	100.00%
Bootstrap support for F7ES97 as seed ortholog is 99%.
Bootstrap support for L0PA13 as seed ortholog is 100%.

Group of orthologs #327. Best score 396 bits
Score difference with first non-orthologous sequence - C.jacchus:396 P.jiroveci:396

F7GFU3              	100.00%		L0PAM5              	100.00%
F7IEY0              	22.95%		
Bootstrap support for F7GFU3 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #328. Best score 396 bits
Score difference with first non-orthologous sequence - C.jacchus:23 P.jiroveci:73

F7BWH8              	100.00%		L0PAY3              	100.00%
Bootstrap support for F7BWH8 as seed ortholog is 78%.
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #329. Best score 395 bits
Score difference with first non-orthologous sequence - C.jacchus:395 P.jiroveci:395

F7CC89              	100.00%		L0PCV8              	100.00%
Bootstrap support for F7CC89 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #330. Best score 394 bits
Score difference with first non-orthologous sequence - C.jacchus:314 P.jiroveci:394

F7G030              	100.00%		L0PCT5              	100.00%
Bootstrap support for F7G030 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #331. Best score 394 bits
Score difference with first non-orthologous sequence - C.jacchus:394 P.jiroveci:394

F7GQ40              	100.00%		L0PDM3              	100.00%
Bootstrap support for F7GQ40 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #332. Best score 393 bits
Score difference with first non-orthologous sequence - C.jacchus:393 P.jiroveci:393

F7HDF1              	100.00%		L0PI13              	100.00%
F6S249              	7.98%		
Bootstrap support for F7HDF1 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #333. Best score 393 bits
Score difference with first non-orthologous sequence - C.jacchus:393 P.jiroveci:393

F7H0M6              	100.00%		L0PB68              	100.00%
Bootstrap support for F7H0M6 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #334. Best score 391 bits
Score difference with first non-orthologous sequence - C.jacchus:391 P.jiroveci:391

F6WPR7              	100.00%		L0PCR5              	100.00%
F7IKP1              	55.11%		L0P9C2              	55.47%
Bootstrap support for F6WPR7 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #335. Best score 391 bits
Score difference with first non-orthologous sequence - C.jacchus:302 P.jiroveci:391

F6RJX1              	100.00%		L0PFP2              	100.00%
Bootstrap support for F6RJX1 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #336. Best score 391 bits
Score difference with first non-orthologous sequence - C.jacchus:213 P.jiroveci:391

F7AU33              	100.00%		L0PEA7              	100.00%
Bootstrap support for F7AU33 as seed ortholog is 100%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #337. Best score 391 bits
Score difference with first non-orthologous sequence - C.jacchus:274 P.jiroveci:391

F7HJ50              	100.00%		L0PB23              	100.00%
Bootstrap support for F7HJ50 as seed ortholog is 100%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #338. Best score 391 bits
Score difference with first non-orthologous sequence - C.jacchus:173 P.jiroveci:391

F7HXL9              	100.00%		L0PFD9              	100.00%
Bootstrap support for F7HXL9 as seed ortholog is 99%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #339. Best score 389 bits
Score difference with first non-orthologous sequence - C.jacchus:389 P.jiroveci:389

F7HTJ7              	100.00%		L0PCH8              	100.00%
Bootstrap support for F7HTJ7 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #340. Best score 387 bits
Score difference with first non-orthologous sequence - C.jacchus:387 P.jiroveci:387

F7HYS3              	100.00%		L0P6U2              	100.00%
Bootstrap support for F7HYS3 as seed ortholog is 100%.
Bootstrap support for L0P6U2 as seed ortholog is 100%.

Group of orthologs #341. Best score 386 bits
Score difference with first non-orthologous sequence - C.jacchus:251 P.jiroveci:240

F7FDX7              	100.00%		L0PBY2              	100.00%
F7IEL0              	25.96%		
Bootstrap support for F7FDX7 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #342. Best score 386 bits
Score difference with first non-orthologous sequence - C.jacchus:200 P.jiroveci:386

F7GNR3              	100.00%		L0PID0              	100.00%
Bootstrap support for F7GNR3 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #343. Best score 386 bits
Score difference with first non-orthologous sequence - C.jacchus:386 P.jiroveci:386

F7H7N0              	100.00%		L0PEY9              	100.00%
Bootstrap support for F7H7N0 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #344. Best score 385 bits
Score difference with first non-orthologous sequence - C.jacchus:296 P.jiroveci:385

F7HZ06              	100.00%		L0PBI2              	100.00%
Bootstrap support for F7HZ06 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #345. Best score 384 bits
Score difference with first non-orthologous sequence - C.jacchus:384 P.jiroveci:384

F7I390              	100.00%		L0PFY1              	100.00%
F7IRU0              	44.47%		
Bootstrap support for F7I390 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #346. Best score 384 bits
Score difference with first non-orthologous sequence - C.jacchus:384 P.jiroveci:384

F7H0R1              	100.00%		L0PA23              	100.00%
Bootstrap support for F7H0R1 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #347. Best score 383 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:220

F7AKA7              	100.00%		L0P9Z0              	100.00%
F7GDI6              	65.83%		
Bootstrap support for F7AKA7 as seed ortholog is 96%.
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #348. Best score 383 bits
Score difference with first non-orthologous sequence - C.jacchus:279 P.jiroveci:383

F7H8V5              	100.00%		L0PB82              	100.00%
Bootstrap support for F7H8V5 as seed ortholog is 99%.
Bootstrap support for L0PB82 as seed ortholog is 100%.

Group of orthologs #349. Best score 382 bits
Score difference with first non-orthologous sequence - C.jacchus:382 P.jiroveci:186

F6XAC8              	100.00%		L0PBH6              	100.00%
F6X0Q4              	44.14%		
F7EYV2              	38.29%		
F6WV72              	20.00%		
Bootstrap support for F6XAC8 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #350. Best score 380 bits
Score difference with first non-orthologous sequence - C.jacchus:380 P.jiroveci:380

F7IRS0              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	31.53%
Bootstrap support for F7IRS0 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #351. Best score 379 bits
Score difference with first non-orthologous sequence - C.jacchus:188 P.jiroveci:379

F6U2S0              	100.00%		L0PE19              	100.00%
F7H145              	40.74%		
F6X3F5              	32.72%		
Bootstrap support for F6U2S0 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #352. Best score 379 bits
Score difference with first non-orthologous sequence - C.jacchus:245 P.jiroveci:379

F6XRA3              	100.00%		L0PHI3              	100.00%
Bootstrap support for F6XRA3 as seed ortholog is 99%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #353. Best score 377 bits
Score difference with first non-orthologous sequence - C.jacchus:301 P.jiroveci:304

F7CZ45              	100.00%		L0P7T8              	100.00%
Bootstrap support for F7CZ45 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #354. Best score 377 bits
Score difference with first non-orthologous sequence - C.jacchus:239 P.jiroveci:377

F7FEU8              	100.00%		L0PEI4              	100.00%
Bootstrap support for F7FEU8 as seed ortholog is 100%.
Bootstrap support for L0PEI4 as seed ortholog is 100%.

Group of orthologs #355. Best score 376 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:225

F7I1T0              	100.00%		L0PCW4              	100.00%
F7ID51              	45.50%		
Bootstrap support for F7I1T0 as seed ortholog is 99%.
Bootstrap support for L0PCW4 as seed ortholog is 100%.

Group of orthologs #356. Best score 376 bits
Score difference with first non-orthologous sequence - C.jacchus:376 P.jiroveci:376

F7EMG6              	100.00%		L0P8A6              	100.00%
Bootstrap support for F7EMG6 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #357. Best score 375 bits
Score difference with first non-orthologous sequence - C.jacchus:375 P.jiroveci:375

F6RKL5              	100.00%		L0P9B4              	100.00%
Bootstrap support for F6RKL5 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #358. Best score 375 bits
Score difference with first non-orthologous sequence - C.jacchus:375 P.jiroveci:375

F7H9S6              	100.00%		L0PFY3              	100.00%
Bootstrap support for F7H9S6 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 100%.

Group of orthologs #359. Best score 374 bits
Score difference with first non-orthologous sequence - C.jacchus:304 P.jiroveci:374

F6W7L4              	100.00%		L0P8G8              	100.00%
Bootstrap support for F6W7L4 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #360. Best score 374 bits
Score difference with first non-orthologous sequence - C.jacchus:235 P.jiroveci:280

F7HTQ1              	100.00%		L0P7Z7              	100.00%
Bootstrap support for F7HTQ1 as seed ortholog is 100%.
Bootstrap support for L0P7Z7 as seed ortholog is 100%.

Group of orthologs #361. Best score 373 bits
Score difference with first non-orthologous sequence - C.jacchus:373 P.jiroveci:373

F7D1V8              	100.00%		L0PGF5              	100.00%
H9KXH6              	21.82%		
Bootstrap support for F7D1V8 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #362. Best score 373 bits
Score difference with first non-orthologous sequence - C.jacchus:264 P.jiroveci:373

F7HAD0              	100.00%		L0PDQ3              	100.00%
F7IQ40              	39.61%		
Bootstrap support for F7HAD0 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #363. Best score 373 bits
Score difference with first non-orthologous sequence - C.jacchus:198 P.jiroveci:373

F6Z0V0              	100.00%		L0PCW8              	100.00%
Bootstrap support for F6Z0V0 as seed ortholog is 99%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #364. Best score 373 bits
Score difference with first non-orthologous sequence - C.jacchus:373 P.jiroveci:373

F7EHL8              	100.00%		L0PFP6              	100.00%
Bootstrap support for F7EHL8 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #365. Best score 372 bits
Score difference with first non-orthologous sequence - C.jacchus:372 P.jiroveci:372

F7ANR6              	100.00%		L0PAI0              	100.00%
Bootstrap support for F7ANR6 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #366. Best score 372 bits
Score difference with first non-orthologous sequence - C.jacchus:372 P.jiroveci:372

F7D6S4              	100.00%		L0PDI1              	100.00%
Bootstrap support for F7D6S4 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #367. Best score 371 bits
Score difference with first non-orthologous sequence - C.jacchus:263 P.jiroveci:371

F6ZBV0              	100.00%		L0P7P4              	100.00%
Bootstrap support for F6ZBV0 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #368. Best score 371 bits
Score difference with first non-orthologous sequence - C.jacchus:371 P.jiroveci:371

F7I107              	100.00%		L0P9U8              	100.00%
Bootstrap support for F7I107 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #369. Best score 370 bits
Score difference with first non-orthologous sequence - C.jacchus:90 P.jiroveci:370

F7IHU9              	100.00%		L0P7X9              	100.00%
F7I3L2              	29.97%		L0PBE2              	80.75%
F7G141              	6.38%		
Bootstrap support for F7IHU9 as seed ortholog is 93%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #370. Best score 370 bits
Score difference with first non-orthologous sequence - C.jacchus:27 P.jiroveci:370

F7HCF5              	100.00%		L0PH29              	100.00%
F7I1M3              	100.00%		
F7ILP7              	51.03%		
Bootstrap support for F7HCF5 as seed ortholog is 78%.
Bootstrap support for F7I1M3 as seed ortholog is 79%.
Bootstrap support for L0PH29 as seed ortholog is 100%.

Group of orthologs #371. Best score 370 bits
Score difference with first non-orthologous sequence - C.jacchus:370 P.jiroveci:370

B0KWC1              	100.00%		L0PC90              	100.00%
Bootstrap support for B0KWC1 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #372. Best score 369 bits
Score difference with first non-orthologous sequence - C.jacchus:369 P.jiroveci:369

F7IHE1              	100.00%		L0PAU1              	100.00%
Bootstrap support for F7IHE1 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #373. Best score 368 bits
Score difference with first non-orthologous sequence - C.jacchus:308 P.jiroveci:368

F6VSE7              	100.00%		L0PEX9              	100.00%
F6W042              	53.10%		
Bootstrap support for F6VSE7 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #374. Best score 366 bits
Score difference with first non-orthologous sequence - C.jacchus:305 P.jiroveci:366

B0KWR4              	100.00%		L0PBA8              	100.00%
F7I1P7              	73.44%		
F6Q217              	11.38%		
Bootstrap support for B0KWR4 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #375. Best score 366 bits
Score difference with first non-orthologous sequence - C.jacchus:277 P.jiroveci:366

F6W1A0              	100.00%		L0PDV0              	100.00%
Bootstrap support for F6W1A0 as seed ortholog is 100%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #376. Best score 365 bits
Score difference with first non-orthologous sequence - C.jacchus:231 P.jiroveci:280

F7I711              	100.00%		L0P942              	100.00%
F6XJB8              	10.23%		L0P7J6              	59.07%
F6Y665              	9.87%		
Bootstrap support for F7I711 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #377. Best score 365 bits
Score difference with first non-orthologous sequence - C.jacchus:365 P.jiroveci:365

B0KWQ8              	100.00%		L0PAC7              	100.00%
Bootstrap support for B0KWQ8 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #378. Best score 365 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:365

F7H4K2              	100.00%		L0PEJ3              	100.00%
Bootstrap support for F7H4K2 as seed ortholog is 99%.
Bootstrap support for L0PEJ3 as seed ortholog is 100%.

Group of orthologs #379. Best score 365 bits
Score difference with first non-orthologous sequence - C.jacchus:308 P.jiroveci:365

F7IEF6              	100.00%		L0PIR9              	100.00%
Bootstrap support for F7IEF6 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #380. Best score 364 bits
Score difference with first non-orthologous sequence - C.jacchus:364 P.jiroveci:364

F7DBZ5              	100.00%		L0PES3              	100.00%
Bootstrap support for F7DBZ5 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #381. Best score 363 bits
Score difference with first non-orthologous sequence - C.jacchus:237 P.jiroveci:363

F7IG68              	100.00%		L0PG24              	100.00%
Bootstrap support for F7IG68 as seed ortholog is 100%.
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #382. Best score 359 bits
Score difference with first non-orthologous sequence - C.jacchus:359 P.jiroveci:359

F6WKE7              	100.00%		L0P9K9              	100.00%
Bootstrap support for F6WKE7 as seed ortholog is 100%.
Bootstrap support for L0P9K9 as seed ortholog is 100%.

Group of orthologs #383. Best score 359 bits
Score difference with first non-orthologous sequence - C.jacchus:111 P.jiroveci:137

F7IRE4              	100.00%		L0PF10              	100.00%
Bootstrap support for F7IRE4 as seed ortholog is 99%.
Bootstrap support for L0PF10 as seed ortholog is 100%.

Group of orthologs #384. Best score 358 bits
Score difference with first non-orthologous sequence - C.jacchus:279 P.jiroveci:358

F7I6Y8              	100.00%		L0PG01              	100.00%
F7FQL2              	22.09%		L0P7J0              	81.94%
Bootstrap support for F7I6Y8 as seed ortholog is 100%.
Bootstrap support for L0PG01 as seed ortholog is 100%.

Group of orthologs #385. Best score 358 bits
Score difference with first non-orthologous sequence - C.jacchus:238 P.jiroveci:358

F7AUJ2              	100.00%		L0PD17              	100.00%
F7EK14              	26.19%		
Bootstrap support for F7AUJ2 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #386. Best score 358 bits
Score difference with first non-orthologous sequence - C.jacchus:255 P.jiroveci:358

F6XCA9              	100.00%		L0PDF2              	100.00%
Bootstrap support for F6XCA9 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #387. Best score 358 bits
Score difference with first non-orthologous sequence - C.jacchus:358 P.jiroveci:358

F7HXY2              	100.00%		L0PCB2              	100.00%
Bootstrap support for F7HXY2 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #388. Best score 358 bits
Score difference with first non-orthologous sequence - C.jacchus:85 P.jiroveci:221

F7I206              	100.00%		L0PFK8              	100.00%
Bootstrap support for F7I206 as seed ortholog is 98%.
Bootstrap support for L0PFK8 as seed ortholog is 100%.

Group of orthologs #389. Best score 356 bits
Score difference with first non-orthologous sequence - C.jacchus:356 P.jiroveci:180

F7GGV4              	100.00%		L0P8U1              	100.00%
Bootstrap support for F7GGV4 as seed ortholog is 100%.
Bootstrap support for L0P8U1 as seed ortholog is 99%.

Group of orthologs #390. Best score 356 bits
Score difference with first non-orthologous sequence - C.jacchus:356 P.jiroveci:356

F7H9S3              	100.00%		L0P9K4              	100.00%
Bootstrap support for F7H9S3 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #391. Best score 356 bits
Score difference with first non-orthologous sequence - C.jacchus:127 P.jiroveci:356

F7GSG3              	100.00%		L0PF21              	100.00%
Bootstrap support for F7GSG3 as seed ortholog is 99%.
Bootstrap support for L0PF21 as seed ortholog is 100%.

Group of orthologs #392. Best score 354 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:112

F7IEQ9              	100.00%		L0PBU4              	100.00%
F6YJP5              	70.20%		
F6UYF9              	66.48%		
Bootstrap support for F7IEQ9 as seed ortholog is 100%.
Bootstrap support for L0PBU4 as seed ortholog is 99%.

Group of orthologs #393. Best score 352 bits
Score difference with first non-orthologous sequence - C.jacchus:352 P.jiroveci:352

F7G419              	100.00%		L0PBA9              	100.00%
F7IJ03              	100.00%		
Bootstrap support for F7G419 as seed ortholog is 100%.
Bootstrap support for F7IJ03 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #394. Best score 352 bits
Score difference with first non-orthologous sequence - C.jacchus:352 P.jiroveci:352

F7FTR0              	100.00%		L0PGC4              	100.00%
Bootstrap support for F7FTR0 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #395. Best score 352 bits
Score difference with first non-orthologous sequence - C.jacchus:352 P.jiroveci:352

F7IKX0              	100.00%		L0PBX2              	100.00%
Bootstrap support for F7IKX0 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #396. Best score 351 bits
Score difference with first non-orthologous sequence - C.jacchus:60 P.jiroveci:351

F7I1T8              	100.00%		L0PB24              	100.00%
F7EBL7              	49.03%		
Bootstrap support for F7I1T8 as seed ortholog is 95%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #397. Best score 350 bits
Score difference with first non-orthologous sequence - C.jacchus:350 P.jiroveci:350

F6R015              	100.00%		L0PBP4              	100.00%
Bootstrap support for F6R015 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #398. Best score 350 bits
Score difference with first non-orthologous sequence - C.jacchus:294 P.jiroveci:350

F6Y6C2              	100.00%		L0PBQ1              	100.00%
Bootstrap support for F6Y6C2 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #399. Best score 350 bits
Score difference with first non-orthologous sequence - C.jacchus:70 P.jiroveci:90

F7I6T8              	100.00%		L0PBP2              	100.00%
Bootstrap support for F7I6T8 as seed ortholog is 87%.
Bootstrap support for L0PBP2 as seed ortholog is 93%.

Group of orthologs #400. Best score 349 bits
Score difference with first non-orthologous sequence - C.jacchus:349 P.jiroveci:216

F6ZY57              	100.00%		L0PET5              	100.00%
Bootstrap support for F6ZY57 as seed ortholog is 100%.
Bootstrap support for L0PET5 as seed ortholog is 100%.

Group of orthologs #401. Best score 348 bits
Score difference with first non-orthologous sequence - C.jacchus:348 P.jiroveci:348

F6WS08              	100.00%		L0PFQ8              	100.00%
Bootstrap support for F6WS08 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #402. Best score 347 bits
Score difference with first non-orthologous sequence - C.jacchus:347 P.jiroveci:98

F7CNX9              	100.00%		L0PD82              	100.00%
Bootstrap support for F7CNX9 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #403. Best score 347 bits
Score difference with first non-orthologous sequence - C.jacchus:125 P.jiroveci:347

F7IFU0              	100.00%		L0P9R8              	100.00%
Bootstrap support for F7IFU0 as seed ortholog is 98%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #404. Best score 347 bits
Score difference with first non-orthologous sequence - C.jacchus:347 P.jiroveci:347

F7INC0              	100.00%		L0PD02              	100.00%
Bootstrap support for F7INC0 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #405. Best score 346 bits
Score difference with first non-orthologous sequence - C.jacchus:346 P.jiroveci:346

F7E6A8              	100.00%		L0PF74              	100.00%
Bootstrap support for F7E6A8 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #406. Best score 346 bits
Score difference with first non-orthologous sequence - C.jacchus:54 P.jiroveci:177

F7G9N7              	100.00%		L0PCJ5              	100.00%
Bootstrap support for F7G9N7 as seed ortholog is 89%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #407. Best score 346 bits
Score difference with first non-orthologous sequence - C.jacchus:251 P.jiroveci:346

F7FYW6              	100.00%		L0PGL1              	100.00%
Bootstrap support for F7FYW6 as seed ortholog is 100%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #408. Best score 346 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:211

F7HA88              	100.00%		L0PEF1              	100.00%
Bootstrap support for F7HA88 as seed ortholog is 99%.
Bootstrap support for L0PEF1 as seed ortholog is 99%.

Group of orthologs #409. Best score 345 bits
Score difference with first non-orthologous sequence - C.jacchus:345 P.jiroveci:345

F6Y809              	100.00%		L0PED5              	100.00%
Bootstrap support for F6Y809 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #410. Best score 344 bits
Score difference with first non-orthologous sequence - C.jacchus:344 P.jiroveci:344

F6Z6Q5              	100.00%		L0PB18              	100.00%
Bootstrap support for F6Z6Q5 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #411. Best score 344 bits
Score difference with first non-orthologous sequence - C.jacchus:344 P.jiroveci:344

F7GXF8              	100.00%		L0PA00              	100.00%
Bootstrap support for F7GXF8 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #412. Best score 343 bits
Score difference with first non-orthologous sequence - C.jacchus:343 P.jiroveci:343

H9KXP1              	100.00%		L0PB98              	100.00%
F6QQF8              	14.87%		
Bootstrap support for H9KXP1 as seed ortholog is 100%.
Bootstrap support for L0PB98 as seed ortholog is 100%.

Group of orthologs #413. Best score 343 bits
Score difference with first non-orthologous sequence - C.jacchus:343 P.jiroveci:343

F7HEG0              	100.00%		L0P8R5              	100.00%
Bootstrap support for F7HEG0 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #414. Best score 342 bits
Score difference with first non-orthologous sequence - C.jacchus:342 P.jiroveci:219

F6PLF4              	100.00%		L0PAW2              	100.00%
Bootstrap support for F6PLF4 as seed ortholog is 100%.
Bootstrap support for L0PAW2 as seed ortholog is 99%.

Group of orthologs #415. Best score 342 bits
Score difference with first non-orthologous sequence - C.jacchus:342 P.jiroveci:342

F6VJV7              	100.00%		L0PD99              	100.00%
Bootstrap support for F6VJV7 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #416. Best score 342 bits
Score difference with first non-orthologous sequence - C.jacchus:342 P.jiroveci:295

F7H5A9              	100.00%		L0PC30              	100.00%
Bootstrap support for F7H5A9 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #417. Best score 342 bits
Score difference with first non-orthologous sequence - C.jacchus:342 P.jiroveci:342

F7I7F9              	100.00%		L0PBN2              	100.00%
Bootstrap support for F7I7F9 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #418. Best score 341 bits
Score difference with first non-orthologous sequence - C.jacchus:341 P.jiroveci:341

F7FZQ5              	100.00%		L0PF30              	100.00%
Bootstrap support for F7FZQ5 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #419. Best score 340 bits
Score difference with first non-orthologous sequence - C.jacchus:233 P.jiroveci:340

F7DZK0              	100.00%		L0PF71              	100.00%
Bootstrap support for F7DZK0 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #420. Best score 340 bits
Score difference with first non-orthologous sequence - C.jacchus:340 P.jiroveci:340

F7IGL2              	100.00%		L0P8R8              	100.00%
Bootstrap support for F7IGL2 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #421. Best score 339 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:339

F6PT35              	100.00%		L0PEF5              	100.00%
Bootstrap support for F6PT35 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #422. Best score 339 bits
Score difference with first non-orthologous sequence - C.jacchus:339 P.jiroveci:339

F7FLA0              	100.00%		L0P9S4              	100.00%
Bootstrap support for F7FLA0 as seed ortholog is 100%.
Bootstrap support for L0P9S4 as seed ortholog is 100%.

Group of orthologs #423. Best score 339 bits
Score difference with first non-orthologous sequence - C.jacchus:339 P.jiroveci:243

F7HYM1              	100.00%		L0P8W4              	100.00%
Bootstrap support for F7HYM1 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #424. Best score 338 bits
Score difference with first non-orthologous sequence - C.jacchus:30 P.jiroveci:338

F7IAS2              	100.00%		L0P9Y8              	100.00%
F6QEE1              	45.60%		
F7HYI6              	26.29%		
Bootstrap support for F7IAS2 as seed ortholog is 81%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #425. Best score 338 bits
Score difference with first non-orthologous sequence - C.jacchus:138 P.jiroveci:338

F7HY71              	100.00%		L0PEG2              	100.00%
Bootstrap support for F7HY71 as seed ortholog is 99%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #426. Best score 338 bits
Score difference with first non-orthologous sequence - C.jacchus:338 P.jiroveci:338

F7HYL7              	100.00%		L0PHL3              	100.00%
Bootstrap support for F7HYL7 as seed ortholog is 100%.
Bootstrap support for L0PHL3 as seed ortholog is 100%.

Group of orthologs #427. Best score 337 bits
Score difference with first non-orthologous sequence - C.jacchus:337 P.jiroveci:337

F6YR28              	100.00%		L0PF46              	100.00%
Bootstrap support for F6YR28 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #428. Best score 336 bits
Score difference with first non-orthologous sequence - C.jacchus:336 P.jiroveci:336

F7HR82              	100.00%		L0PBC5              	100.00%
F7GSS7              	30.39%		
Bootstrap support for F7HR82 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #429. Best score 336 bits
Score difference with first non-orthologous sequence - C.jacchus:295 P.jiroveci:336

F7HFM9              	100.00%		L0PCQ8              	100.00%
Bootstrap support for F7HFM9 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #430. Best score 334 bits
Score difference with first non-orthologous sequence - C.jacchus:334 P.jiroveci:203

F7ID33              	100.00%		L0P9F3              	100.00%
F6WTG9              	16.11%		
Bootstrap support for F7ID33 as seed ortholog is 100%.
Bootstrap support for L0P9F3 as seed ortholog is 99%.

Group of orthologs #431. Best score 333 bits
Score difference with first non-orthologous sequence - C.jacchus:333 P.jiroveci:333

F7H9Q0              	100.00%		L0P7R5              	100.00%
Bootstrap support for F7H9Q0 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 100%.

Group of orthologs #432. Best score 332 bits
Score difference with first non-orthologous sequence - C.jacchus:332 P.jiroveci:332

F7GUB1              	100.00%		L0PB54              	100.00%
F7FJP8              	51.68%		
Bootstrap support for F7GUB1 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #433. Best score 332 bits
Score difference with first non-orthologous sequence - C.jacchus:332 P.jiroveci:332

F7I725              	100.00%		L0P7N5              	100.00%
F6YTK3              	35.15%		
Bootstrap support for F7I725 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #434. Best score 331 bits
Score difference with first non-orthologous sequence - C.jacchus:138 P.jiroveci:331

F7BQL6              	100.00%		L0PA42              	100.00%
F6Y3M5              	57.93%		
F7HVK0              	49.82%		
F7DDD0              	42.07%		
F7ILB7              	15.13%		
F7I782              	7.75%		
Bootstrap support for F7BQL6 as seed ortholog is 99%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #435. Best score 331 bits
Score difference with first non-orthologous sequence - C.jacchus:71 P.jiroveci:331

F7GSA5              	100.00%		L0PBM5              	100.00%
F6S7I8              	40.63%		
F7H0W9              	38.62%		
Bootstrap support for F7GSA5 as seed ortholog is 89%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #436. Best score 331 bits
Score difference with first non-orthologous sequence - C.jacchus:331 P.jiroveci:331

F7EMK7              	100.00%		L0P912              	100.00%
                    	       		L0P908              	89.43%
Bootstrap support for F7EMK7 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #437. Best score 331 bits
Score difference with first non-orthologous sequence - C.jacchus:331 P.jiroveci:331

F7D3T8              	100.00%		L0PBD2              	100.00%
Bootstrap support for F7D3T8 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #438. Best score 331 bits
Score difference with first non-orthologous sequence - C.jacchus:331 P.jiroveci:331

F7FTC2              	100.00%		L0PF92              	100.00%
Bootstrap support for F7FTC2 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #439. Best score 330 bits
Score difference with first non-orthologous sequence - C.jacchus:330 P.jiroveci:330

F7ANJ2              	100.00%		L0PFI2              	100.00%
Bootstrap support for F7ANJ2 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #440. Best score 329 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:329

F7I7V3              	100.00%		L0P891              	100.00%
Bootstrap support for F7I7V3 as seed ortholog is 99%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #441. Best score 328 bits
Score difference with first non-orthologous sequence - C.jacchus:204 P.jiroveci:234

F7HKP7              	100.00%		L0PB21              	100.00%
F7I848              	71.32%		
Bootstrap support for F7HKP7 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 100%.

Group of orthologs #442. Best score 328 bits
Score difference with first non-orthologous sequence - C.jacchus:328 P.jiroveci:328

F7HXD2              	100.00%		L0P8J2              	100.00%
Bootstrap support for F7HXD2 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #443. Best score 327 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:327

F7H527              	100.00%		L0PEM6              	100.00%
F7EA77              	68.95%		
Bootstrap support for F7H527 as seed ortholog is 100%.
Bootstrap support for L0PEM6 as seed ortholog is 100%.

Group of orthologs #444. Best score 327 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:242

B0KWJ2              	100.00%		L0P8N0              	100.00%
Bootstrap support for B0KWJ2 as seed ortholog is 100%.
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #445. Best score 327 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:327

F6ZYC7              	100.00%		L0PBZ7              	100.00%
Bootstrap support for F6ZYC7 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #446. Best score 327 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:327

F7B5L4              	100.00%		L0PAF9              	100.00%
Bootstrap support for F7B5L4 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #447. Best score 327 bits
Score difference with first non-orthologous sequence - C.jacchus:199 P.jiroveci:227

F7I7H8              	100.00%		L0PBM6              	100.00%
Bootstrap support for F7I7H8 as seed ortholog is 99%.
Bootstrap support for L0PBM6 as seed ortholog is 100%.

Group of orthologs #448. Best score 327 bits
Score difference with first non-orthologous sequence - C.jacchus:327 P.jiroveci:327

F7I6Y5              	100.00%		L0PCY9              	100.00%
Bootstrap support for F7I6Y5 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #449. Best score 326 bits
Score difference with first non-orthologous sequence - C.jacchus:259 P.jiroveci:326

F7HZX3              	100.00%		L0PB00              	100.00%
Bootstrap support for F7HZX3 as seed ortholog is 100%.
Bootstrap support for L0PB00 as seed ortholog is 100%.

Group of orthologs #450. Best score 325 bits
Score difference with first non-orthologous sequence - C.jacchus:137 P.jiroveci:207

F7EW62              	100.00%		L0PAY5              	100.00%
Bootstrap support for F7EW62 as seed ortholog is 99%.
Bootstrap support for L0PAY5 as seed ortholog is 100%.

Group of orthologs #451. Best score 324 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:66

F7C8F5              	100.00%		L0PA26              	100.00%
Bootstrap support for F7C8F5 as seed ortholog is 99%.
Bootstrap support for L0PA26 as seed ortholog is 96%.

Group of orthologs #452. Best score 323 bits
Score difference with first non-orthologous sequence - C.jacchus:156 P.jiroveci:323

F6PQP1              	100.00%		L0PCG4              	100.00%
F7IT85              	98.60%		
F7CW10              	95.79%		
F7BQC6              	78.50%		
F6WBN1              	50.93%		
F6T2A2              	46.73%		
Bootstrap support for F6PQP1 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #453. Best score 323 bits
Score difference with first non-orthologous sequence - C.jacchus:323 P.jiroveci:323

F7GNJ3              	100.00%		L0PBY3              	100.00%
F7CVX3              	27.09%		
Bootstrap support for F7GNJ3 as seed ortholog is 100%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #454. Best score 322 bits
Score difference with first non-orthologous sequence - C.jacchus:322 P.jiroveci:322

F6SPL4              	100.00%		L0P9B6              	100.00%
Bootstrap support for F6SPL4 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #455. Best score 322 bits
Score difference with first non-orthologous sequence - C.jacchus:322 P.jiroveci:322

F7B365              	100.00%		L0PBT3              	100.00%
Bootstrap support for F7B365 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #456. Best score 321 bits
Score difference with first non-orthologous sequence - C.jacchus:321 P.jiroveci:321

F6SXT2              	100.00%		L0PAL9              	100.00%
F6T8N9              	64.66%		L0PBY7              	41.33%
F7BFK1              	37.55%		
Bootstrap support for F6SXT2 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #457. Best score 321 bits
Score difference with first non-orthologous sequence - C.jacchus:184 P.jiroveci:321

F6VYY3              	100.00%		L0P983              	100.00%
Bootstrap support for F6VYY3 as seed ortholog is 99%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #458. Best score 320 bits
Score difference with first non-orthologous sequence - C.jacchus:260 P.jiroveci:320

F6RRD4              	100.00%		L0P8X1              	100.00%
Bootstrap support for F6RRD4 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #459. Best score 320 bits
Score difference with first non-orthologous sequence - C.jacchus:320 P.jiroveci:320

F6XKE7              	100.00%		L0PEB2              	100.00%
Bootstrap support for F6XKE7 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #460. Best score 319 bits
Score difference with first non-orthologous sequence - C.jacchus:319 P.jiroveci:319

F7GTE7              	100.00%		L0PA65              	100.00%
Bootstrap support for F7GTE7 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #461. Best score 318 bits
Score difference with first non-orthologous sequence - C.jacchus:318 P.jiroveci:318

F6TUT5              	100.00%		L0PCK3              	100.00%
Bootstrap support for F6TUT5 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #462. Best score 318 bits
Score difference with first non-orthologous sequence - C.jacchus:318 P.jiroveci:318

F7IFN1              	100.00%		L0P9X7              	100.00%
Bootstrap support for F7IFN1 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #463. Best score 317 bits
Score difference with first non-orthologous sequence - C.jacchus:317 P.jiroveci:317

F7BAF1              	100.00%		L0PFC9              	100.00%
F7GUQ3              	100.00%		
F6SLQ9              	95.15%		
F6XNM7              	94.39%		
F7ILE7              	83.93%		
F6QZG2              	78.32%		
F7F616              	78.32%		
H9KWP2              	75.77%		
F7GQM8              	73.98%		
F7GD61              	62.50%		
Bootstrap support for F7BAF1 as seed ortholog is 100%.
Bootstrap support for F7GUQ3 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #464. Best score 317 bits
Score difference with first non-orthologous sequence - C.jacchus:317 P.jiroveci:317

F7HNX4              	100.00%		L0P9G9              	100.00%
Bootstrap support for F7HNX4 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #465. Best score 317 bits
Score difference with first non-orthologous sequence - C.jacchus:237 P.jiroveci:317

F7IRF2              	100.00%		L0PDL9              	100.00%
Bootstrap support for F7IRF2 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #466. Best score 316 bits
Score difference with first non-orthologous sequence - C.jacchus:208 P.jiroveci:316

F6WBQ2              	100.00%		L0PFE9              	100.00%
Bootstrap support for F6WBQ2 as seed ortholog is 100%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #467. Best score 315 bits
Score difference with first non-orthologous sequence - C.jacchus:315 P.jiroveci:315

F7E965              	100.00%		L0PDC9              	100.00%
Bootstrap support for F7E965 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #468. Best score 314 bits
Score difference with first non-orthologous sequence - C.jacchus:314 P.jiroveci:314

F6QM88              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	85.47%
Bootstrap support for F6QM88 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #469. Best score 314 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:221

F7HJ38              	100.00%		L0PB70              	100.00%
F6PWB9              	9.94%		
Bootstrap support for F7HJ38 as seed ortholog is 99%.
Bootstrap support for L0PB70 as seed ortholog is 99%.

Group of orthologs #470. Best score 314 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:314

F7HZ35              	100.00%		L0PBD0              	100.00%
F7ILT4              	40.13%		
Bootstrap support for F7HZ35 as seed ortholog is 86%.
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #471. Best score 313 bits
Score difference with first non-orthologous sequence - C.jacchus:313 P.jiroveci:313

F6WZ07              	100.00%		L0PBK2              	100.00%
Bootstrap support for F6WZ07 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #472. Best score 313 bits
Score difference with first non-orthologous sequence - C.jacchus:313 P.jiroveci:313

F6U8I0              	100.00%		L0PH80              	100.00%
Bootstrap support for F6U8I0 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #473. Best score 312 bits
Score difference with first non-orthologous sequence - C.jacchus:312 P.jiroveci:312

B0VXJ5              	100.00%		L0PA60              	100.00%
Bootstrap support for B0VXJ5 as seed ortholog is 100%.
Bootstrap support for L0PA60 as seed ortholog is 100%.

Group of orthologs #474. Best score 311 bits
Score difference with first non-orthologous sequence - C.jacchus:311 P.jiroveci:311

F7GY87              	100.00%		L0PC62              	100.00%
Bootstrap support for F7GY87 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #475. Best score 310 bits
Score difference with first non-orthologous sequence - C.jacchus:310 P.jiroveci:310

F7HWN1              	100.00%		L0PGL6              	100.00%
Bootstrap support for F7HWN1 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #476. Best score 309 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:309

F7AET8              	100.00%		L0PGR0              	100.00%
F7BGD7              	100.00%		
Bootstrap support for F7AET8 as seed ortholog is 99%.
Bootstrap support for F7BGD7 as seed ortholog is 99%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #477. Best score 308 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:308

F7IR24              	100.00%		L0PG34              	100.00%
Bootstrap support for F7IR24 as seed ortholog is 100%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #478. Best score 307 bits
Score difference with first non-orthologous sequence - C.jacchus:307 P.jiroveci:307

F7DX21              	100.00%		L0PAG0              	100.00%
B0KWW6              	92.31%		
F7I719              	90.21%		
F7DKH3              	89.51%		
F7F7Y4              	80.42%		
F7IA01              	75.52%		
Bootstrap support for F7DX21 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #479. Best score 307 bits
Score difference with first non-orthologous sequence - C.jacchus:307 P.jiroveci:307

F7IPA3              	100.00%		L0PAP4              	100.00%
F7I384              	45.70%		
Bootstrap support for F7IPA3 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #480. Best score 307 bits
Score difference with first non-orthologous sequence - C.jacchus:307 P.jiroveci:307

F6ZTQ6              	100.00%		L0P8W7              	100.00%
Bootstrap support for F6ZTQ6 as seed ortholog is 100%.
Bootstrap support for L0P8W7 as seed ortholog is 100%.

Group of orthologs #481. Best score 306 bits
Score difference with first non-orthologous sequence - C.jacchus:306 P.jiroveci:306

F7IBF0              	100.00%		L0P870              	100.00%
Bootstrap support for F7IBF0 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #482. Best score 305 bits
Score difference with first non-orthologous sequence - C.jacchus:58 P.jiroveci:305

F7GZ27              	100.00%		L0P9S5              	100.00%
F7HYF7              	10.00%		
Bootstrap support for F7GZ27 as seed ortholog is 99%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #483. Best score 305 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:305

F7I538              	100.00%		L0PF98              	100.00%
F6WY74              	47.58%		
Bootstrap support for F7I538 as seed ortholog is 99%.
Bootstrap support for L0PF98 as seed ortholog is 100%.

Group of orthologs #484. Best score 305 bits
Score difference with first non-orthologous sequence - C.jacchus:305 P.jiroveci:305

F6RRH3              	100.00%		L0PAU5              	100.00%
Bootstrap support for F6RRH3 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #485. Best score 305 bits
Score difference with first non-orthologous sequence - C.jacchus:305 P.jiroveci:305

F7HFQ2              	100.00%		L0P8T4              	100.00%
Bootstrap support for F7HFQ2 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #486. Best score 305 bits
Score difference with first non-orthologous sequence - C.jacchus:192 P.jiroveci:305

F7I7V4              	100.00%		L0PBS9              	100.00%
Bootstrap support for F7I7V4 as seed ortholog is 100%.
Bootstrap support for L0PBS9 as seed ortholog is 100%.

Group of orthologs #487. Best score 304 bits
Score difference with first non-orthologous sequence - C.jacchus:304 P.jiroveci:304

F7AH92              	100.00%		L0PD03              	100.00%
F7I437              	45.58%		
F6T326              	26.51%		
F7HLB0              	7.91%		
Bootstrap support for F7AH92 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #488. Best score 302 bits
Score difference with first non-orthologous sequence - C.jacchus:302 P.jiroveci:302

F6W522              	100.00%		L0P865              	100.00%
Bootstrap support for F6W522 as seed ortholog is 100%.
Bootstrap support for L0P865 as seed ortholog is 100%.

Group of orthologs #489. Best score 302 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:302

F6V436              	100.00%		L0P9X4              	100.00%
Bootstrap support for F6V436 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #490. Best score 302 bits
Score difference with first non-orthologous sequence - C.jacchus:302 P.jiroveci:302

F6XWP0              	100.00%		L0PHK3              	100.00%
Bootstrap support for F6XWP0 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #491. Best score 302 bits
Score difference with first non-orthologous sequence - C.jacchus:302 P.jiroveci:302

F7H2S1              	100.00%		L0PIV4              	100.00%
Bootstrap support for F7H2S1 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #492. Best score 301 bits
Score difference with first non-orthologous sequence - C.jacchus:301 P.jiroveci:301

F7HG37              	100.00%		L0P8B2              	100.00%
Bootstrap support for F7HG37 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #493. Best score 300 bits
Score difference with first non-orthologous sequence - C.jacchus:142 P.jiroveci:212

F7FCJ5              	100.00%		L0P966              	100.00%
F7HIL6              	39.05%		
Bootstrap support for F7FCJ5 as seed ortholog is 99%.
Bootstrap support for L0P966 as seed ortholog is 100%.

Group of orthologs #494. Best score 300 bits
Score difference with first non-orthologous sequence - C.jacchus:147 P.jiroveci:88

F7FY54              	100.00%		L0PA63              	100.00%
Bootstrap support for F7FY54 as seed ortholog is 99%.
Bootstrap support for L0PA63 as seed ortholog is 79%.

Group of orthologs #495. Best score 300 bits
Score difference with first non-orthologous sequence - C.jacchus:300 P.jiroveci:300

F7H3P1              	100.00%		L0P7I8              	100.00%
Bootstrap support for F7H3P1 as seed ortholog is 100%.
Bootstrap support for L0P7I8 as seed ortholog is 100%.

Group of orthologs #496. Best score 299 bits
Score difference with first non-orthologous sequence - C.jacchus:116 P.jiroveci:196

F7FRF7              	100.00%		L0P8B4              	100.00%
F7FQX1              	65.28%		
Bootstrap support for F7FRF7 as seed ortholog is 99%.
Bootstrap support for L0P8B4 as seed ortholog is 100%.

Group of orthologs #497. Best score 298 bits
Score difference with first non-orthologous sequence - C.jacchus:298 P.jiroveci:298

F6T2T8              	100.00%		L0PFI8              	100.00%
Bootstrap support for F6T2T8 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #498. Best score 298 bits
Score difference with first non-orthologous sequence - C.jacchus:298 P.jiroveci:298

F7EJI3              	100.00%		L0PD68              	100.00%
Bootstrap support for F7EJI3 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #499. Best score 297 bits
Score difference with first non-orthologous sequence - C.jacchus:297 P.jiroveci:297

F7GUM3              	100.00%		L0PDZ2              	100.00%
Bootstrap support for F7GUM3 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #500. Best score 297 bits
Score difference with first non-orthologous sequence - C.jacchus:297 P.jiroveci:297

F7HWR0              	100.00%		L0PHG9              	100.00%
Bootstrap support for F7HWR0 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #501. Best score 296 bits
Score difference with first non-orthologous sequence - C.jacchus:296 P.jiroveci:296

F6PIE6              	100.00%		L0PF83              	100.00%
Bootstrap support for F6PIE6 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #502. Best score 296 bits
Score difference with first non-orthologous sequence - C.jacchus:249 P.jiroveci:253

F7BW31              	100.00%		L0P8I1              	100.00%
Bootstrap support for F7BW31 as seed ortholog is 100%.
Bootstrap support for L0P8I1 as seed ortholog is 100%.

Group of orthologs #503. Best score 296 bits
Score difference with first non-orthologous sequence - C.jacchus:210 P.jiroveci:296

F7BRP9              	100.00%		L0PBK1              	100.00%
Bootstrap support for F7BRP9 as seed ortholog is 100%.
Bootstrap support for L0PBK1 as seed ortholog is 100%.

Group of orthologs #504. Best score 295 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:295

B0KWM7              	100.00%		L0PEP1              	100.00%
F7GP46              	23.35%		L0PIJ3              	81.51%
Bootstrap support for B0KWM7 as seed ortholog is 99%.
Bootstrap support for L0PEP1 as seed ortholog is 100%.

Group of orthologs #505. Best score 295 bits
Score difference with first non-orthologous sequence - C.jacchus:295 P.jiroveci:295

F6QQD6              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	42.00%
Bootstrap support for F6QQD6 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #506. Best score 295 bits
Score difference with first non-orthologous sequence - C.jacchus:207 P.jiroveci:295

F6QB54              	100.00%		L0PAL2              	100.00%
Bootstrap support for F6QB54 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #507. Best score 294 bits
Score difference with first non-orthologous sequence - C.jacchus:170 P.jiroveci:294

F6VR08              	100.00%		L0PHG7              	100.00%
F7E879              	75.84%		
F7H2Y3              	51.38%		
F7IJ35              	41.59%		
F7INR7              	40.06%		
F7GR24              	25.99%		
Bootstrap support for F6VR08 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #508. Best score 294 bits
Score difference with first non-orthologous sequence - C.jacchus:294 P.jiroveci:294

F6Q471              	100.00%		L0PCV1              	100.00%
H9KVQ1              	76.88%		
H9KX19              	25.00%		
Bootstrap support for F6Q471 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #509. Best score 294 bits
Score difference with first non-orthologous sequence - C.jacchus:294 P.jiroveci:294

F7D1Q0              	100.00%		L0PD41              	100.00%
Bootstrap support for F7D1Q0 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #510. Best score 294 bits
Score difference with first non-orthologous sequence - C.jacchus:294 P.jiroveci:294

F7IB26              	100.00%		L0P9Z7              	100.00%
Bootstrap support for F7IB26 as seed ortholog is 100%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #511. Best score 292 bits
Score difference with first non-orthologous sequence - C.jacchus:292 P.jiroveci:292

F6WL10              	100.00%		L0P961              	100.00%
F7GG03              	84.55%		
F6WKC6              	75.49%		
F7IE32              	73.27%		
Bootstrap support for F6WL10 as seed ortholog is 100%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #512. Best score 292 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:292

F7BLG6              	100.00%		L0PDC7              	100.00%
F6RT10              	15.73%		
Bootstrap support for F7BLG6 as seed ortholog is 99%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #513. Best score 292 bits
Score difference with first non-orthologous sequence - C.jacchus:116 P.jiroveci:189

F7DI73              	100.00%		L0PB10              	100.00%
Bootstrap support for F7DI73 as seed ortholog is 99%.
Bootstrap support for L0PB10 as seed ortholog is 100%.

Group of orthologs #514. Best score 292 bits
Score difference with first non-orthologous sequence - C.jacchus:292 P.jiroveci:292

F7I3Z4              	100.00%		L0PB28              	100.00%
Bootstrap support for F7I3Z4 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #515. Best score 291 bits
Score difference with first non-orthologous sequence - C.jacchus:291 P.jiroveci:291

F7IN61              	100.00%		L0PDY1              	100.00%
F7IM28              	46.35%		
Bootstrap support for F7IN61 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #516. Best score 291 bits
Score difference with first non-orthologous sequence - C.jacchus:291 P.jiroveci:291

F7IBM0              	100.00%		L0PAC0              	100.00%
Bootstrap support for F7IBM0 as seed ortholog is 100%.
Bootstrap support for L0PAC0 as seed ortholog is 100%.

Group of orthologs #517. Best score 290 bits
Score difference with first non-orthologous sequence - C.jacchus:27 P.jiroveci:103

F6XQS5              	100.00%		L0PB47              	100.00%
F7GNM2              	70.20%		
Bootstrap support for F6XQS5 as seed ortholog is 74%.
Alternative seed ortholog is F7EJT6 (27 bits away from this cluster)
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #518. Best score 289 bits
Score difference with first non-orthologous sequence - C.jacchus:188 P.jiroveci:289

B0KWK3              	100.00%		L0PDL6              	100.00%
F6X335              	54.69%		
Bootstrap support for B0KWK3 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #519. Best score 289 bits
Score difference with first non-orthologous sequence - C.jacchus:12 P.jiroveci:289

F7H488              	100.00%		L0PA09              	100.00%
Bootstrap support for F7H488 as seed ortholog is 62%.
Alternative seed ortholog is F7H0W5 (12 bits away from this cluster)
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #520. Best score 288 bits
Score difference with first non-orthologous sequence - C.jacchus:288 P.jiroveci:288

F6YPY2              	100.00%		L0PG44              	100.00%
Bootstrap support for F6YPY2 as seed ortholog is 100%.
Bootstrap support for L0PG44 as seed ortholog is 100%.

Group of orthologs #521. Best score 288 bits
Score difference with first non-orthologous sequence - C.jacchus:288 P.jiroveci:288

F7HKN9              	100.00%		L0PG43              	100.00%
Bootstrap support for F7HKN9 as seed ortholog is 100%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #522. Best score 288 bits
Score difference with first non-orthologous sequence - C.jacchus:288 P.jiroveci:288

F7IE27              	100.00%		L0PDV1              	100.00%
Bootstrap support for F7IE27 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #523. Best score 287 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:287

F7DIE4              	100.00%		L0P9F6              	100.00%
F7H7Y6              	41.79%		
F7FHQ9              	40.92%		
F7F677              	30.84%		
F7D2Y3              	30.55%		
F7IK07              	23.34%		
F6WDV6              	18.73%		
Bootstrap support for F7DIE4 as seed ortholog is 99%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #524. Best score 287 bits
Score difference with first non-orthologous sequence - C.jacchus:173 P.jiroveci:287

F7EAM3              	100.00%		L0PDT4              	100.00%
F7A3F2              	44.36%		
Bootstrap support for F7EAM3 as seed ortholog is 99%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #525. Best score 287 bits
Score difference with first non-orthologous sequence - C.jacchus:287 P.jiroveci:287

F6YJQ2              	100.00%		L0PC44              	100.00%
Bootstrap support for F6YJQ2 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #526. Best score 287 bits
Score difference with first non-orthologous sequence - C.jacchus:287 P.jiroveci:287

F7BJ23              	100.00%		L0P861              	100.00%
Bootstrap support for F7BJ23 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #527. Best score 287 bits
Score difference with first non-orthologous sequence - C.jacchus:287 P.jiroveci:287

F6ZS88              	100.00%		L0PFZ0              	100.00%
Bootstrap support for F6ZS88 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #528. Best score 287 bits
Score difference with first non-orthologous sequence - C.jacchus:201 P.jiroveci:287

F7HKD8              	100.00%		L0PEM3              	100.00%
Bootstrap support for F7HKD8 as seed ortholog is 99%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #529. Best score 286 bits
Score difference with first non-orthologous sequence - C.jacchus:286 P.jiroveci:286

F6TUD2              	100.00%		L0PEY2              	100.00%
Bootstrap support for F6TUD2 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #530. Best score 285 bits
Score difference with first non-orthologous sequence - C.jacchus:167 P.jiroveci:285

F6UUK5              	100.00%		L0PGF2              	100.00%
F7IH06              	49.90%		
F7HXQ1              	34.50%		
Bootstrap support for F6UUK5 as seed ortholog is 99%.
Bootstrap support for L0PGF2 as seed ortholog is 100%.

Group of orthologs #531. Best score 285 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:285

F7H7D3              	100.00%		L0PEJ1              	100.00%
F6QD82              	41.61%		
Bootstrap support for F7H7D3 as seed ortholog is 94%.
Bootstrap support for L0PEJ1 as seed ortholog is 100%.

Group of orthologs #532. Best score 285 bits
Score difference with first non-orthologous sequence - C.jacchus:285 P.jiroveci:285

F6QU94              	100.00%		L0PEG1              	100.00%
Bootstrap support for F6QU94 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 100%.

Group of orthologs #533. Best score 285 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:285

F7HY95              	100.00%		L0PFS8              	100.00%
Bootstrap support for F7HY95 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #534. Best score 284 bits
Score difference with first non-orthologous sequence - C.jacchus:197 P.jiroveci:284

F7FND8              	100.00%		L0PG89              	100.00%
Q9N2D4              	24.18%		
Q9N2D2              	16.31%		
Q9N2D3              	12.86%		
F6YAL3              	5.76%		
Bootstrap support for F7FND8 as seed ortholog is 100%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #535. Best score 282 bits
Score difference with first non-orthologous sequence - C.jacchus:282 P.jiroveci:282

F6T667              	100.00%		L0PCI3              	100.00%
Bootstrap support for F6T667 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #536. Best score 282 bits
Score difference with first non-orthologous sequence - C.jacchus:85 P.jiroveci:184

F7H048              	100.00%		L0PC59              	100.00%
Bootstrap support for F7H048 as seed ortholog is 100%.
Bootstrap support for L0PC59 as seed ortholog is 100%.

Group of orthologs #537. Best score 282 bits
Score difference with first non-orthologous sequence - C.jacchus:210 P.jiroveci:282

F7GK55              	100.00%		L0PHJ3              	100.00%
Bootstrap support for F7GK55 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #538. Best score 281 bits
Score difference with first non-orthologous sequence - C.jacchus:281 P.jiroveci:281

F6PV17              	100.00%		L0P9C4              	100.00%
F6WB75              	61.72%		
Bootstrap support for F6PV17 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #539. Best score 280 bits
Score difference with first non-orthologous sequence - C.jacchus:280 P.jiroveci:280

F7GXU8              	100.00%		L0PBE0              	100.00%
F7IP25              	26.65%		
Bootstrap support for F7GXU8 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #540. Best score 280 bits
Score difference with first non-orthologous sequence - C.jacchus:280 P.jiroveci:280

B0KWL6              	100.00%		L0PEV9              	100.00%
Bootstrap support for B0KWL6 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #541. Best score 280 bits
Score difference with first non-orthologous sequence - C.jacchus:130 P.jiroveci:280

F7EWM1              	100.00%		L0P9T2              	100.00%
Bootstrap support for F7EWM1 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #542. Best score 279 bits
Score difference with first non-orthologous sequence - C.jacchus:279 P.jiroveci:279

F6S2P3              	100.00%		L0PF79              	100.00%
Bootstrap support for F6S2P3 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #543. Best score 278 bits
Score difference with first non-orthologous sequence - C.jacchus:109 P.jiroveci:278

F7HFY1              	100.00%		L0PCG0              	100.00%
F7ELN5              	96.79%		
F7DCQ5              	87.16%		
F7I4U0              	56.42%		
F7I164              	31.19%		
F7IGU0              	6.88%		
Bootstrap support for F7HFY1 as seed ortholog is 99%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #544. Best score 278 bits
Score difference with first non-orthologous sequence - C.jacchus:278 P.jiroveci:278

F7IAE1              	100.00%		L0PEB1              	100.00%
F7BSQ4              	35.62%		
Bootstrap support for F7IAE1 as seed ortholog is 100%.
Bootstrap support for L0PEB1 as seed ortholog is 100%.

Group of orthologs #545. Best score 278 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:220

F7IHD5              	100.00%		L0PGP6              	100.00%
F7IRN0              	48.89%		
Bootstrap support for F7IHD5 as seed ortholog is 99%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #546. Best score 277 bits
Score difference with first non-orthologous sequence - C.jacchus:277 P.jiroveci:277

F6QH07              	100.00%		L0P9T5              	100.00%
Bootstrap support for F6QH07 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #547. Best score 277 bits
Score difference with first non-orthologous sequence - C.jacchus:277 P.jiroveci:277

F6YPN2              	100.00%		L0PGV8              	100.00%
Bootstrap support for F6YPN2 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #548. Best score 277 bits
Score difference with first non-orthologous sequence - C.jacchus:277 P.jiroveci:277

F7CB92              	100.00%		L0PC61              	100.00%
Bootstrap support for F7CB92 as seed ortholog is 100%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #549. Best score 277 bits
Score difference with first non-orthologous sequence - C.jacchus:185 P.jiroveci:224

F7INV0              	100.00%		L0PE04              	100.00%
Bootstrap support for F7INV0 as seed ortholog is 100%.
Bootstrap support for L0PE04 as seed ortholog is 100%.

Group of orthologs #550. Best score 275 bits
Score difference with first non-orthologous sequence - C.jacchus:275 P.jiroveci:275

F7GK51              	100.00%		L0PAD9              	100.00%
Bootstrap support for F7GK51 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #551. Best score 275 bits
Score difference with first non-orthologous sequence - C.jacchus:275 P.jiroveci:275

F7IG65              	100.00%		L0P9S7              	100.00%
Bootstrap support for F7IG65 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #552. Best score 274 bits
Score difference with first non-orthologous sequence - C.jacchus:274 P.jiroveci:274

F7DIA0              	100.00%		L0PE17              	100.00%
Bootstrap support for F7DIA0 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #553. Best score 274 bits
Score difference with first non-orthologous sequence - C.jacchus:274 P.jiroveci:274

F7HX80              	100.00%		L0PCU5              	100.00%
Bootstrap support for F7HX80 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #554. Best score 273 bits
Score difference with first non-orthologous sequence - C.jacchus:273 P.jiroveci:273

F7AF51              	100.00%		L0PAQ1              	100.00%
Bootstrap support for F7AF51 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #555. Best score 273 bits
Score difference with first non-orthologous sequence - C.jacchus:214 P.jiroveci:222

F7EGR4              	100.00%		L0PHK8              	100.00%
Bootstrap support for F7EGR4 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 100%.

Group of orthologs #556. Best score 272 bits
Score difference with first non-orthologous sequence - C.jacchus:86 P.jiroveci:163

F6W8R7              	100.00%		L0P9E4              	100.00%
F6RCS2              	57.29%		
F6XY54              	30.21%		
F7ISZ1              	29.17%		
Bootstrap support for F6W8R7 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 100%.

Group of orthologs #557. Best score 272 bits
Score difference with first non-orthologous sequence - C.jacchus:272 P.jiroveci:272

F6QQJ2              	100.00%		L0PFU1              	100.00%
Bootstrap support for F6QQJ2 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #558. Best score 272 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:272

F7C6H3              	100.00%		L0PHN0              	100.00%
Bootstrap support for F7C6H3 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #559. Best score 271 bits
Score difference with first non-orthologous sequence - C.jacchus:271 P.jiroveci:38

F7IKJ5              	100.00%		L0PAI9              	100.00%
F7IPU5              	100.00%		
F7IGV9              	63.53%		
F7BND0              	25.43%		
B0KWP7              	8.75%		
F7H547              	8.42%		
F7I1R2              	6.83%		
F6XAA7              	6.60%		
Bootstrap support for F7IKJ5 as seed ortholog is 100%.
Bootstrap support for F7IPU5 as seed ortholog is 100%.
Bootstrap support for L0PAI9 as seed ortholog is 87%.

Group of orthologs #560. Best score 271 bits
Score difference with first non-orthologous sequence - C.jacchus:271 P.jiroveci:172

F7CMY4              	100.00%		L0P7W4              	100.00%
Bootstrap support for F7CMY4 as seed ortholog is 100%.
Bootstrap support for L0P7W4 as seed ortholog is 100%.

Group of orthologs #561. Best score 271 bits
Score difference with first non-orthologous sequence - C.jacchus:271 P.jiroveci:225

F7C5X3              	100.00%		L0PBH8              	100.00%
Bootstrap support for F7C5X3 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #562. Best score 270 bits
Score difference with first non-orthologous sequence - C.jacchus:188 P.jiroveci:270

F7DRQ0              	100.00%		L0PET2              	100.00%
F7I7T7              	17.79%		L0PAE5              	83.70%
Bootstrap support for F7DRQ0 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #563. Best score 270 bits
Score difference with first non-orthologous sequence - C.jacchus:270 P.jiroveci:270

F6QE98              	100.00%		L0PA72              	100.00%
F7BVW8              	59.18%		
Bootstrap support for F6QE98 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #564. Best score 270 bits
Score difference with first non-orthologous sequence - C.jacchus:270 P.jiroveci:270

F7EH64              	100.00%		L0P7Q3              	100.00%
Bootstrap support for F7EH64 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #565. Best score 270 bits
Score difference with first non-orthologous sequence - C.jacchus:77 P.jiroveci:270

F7E9Q6              	100.00%		L0PCJ2              	100.00%
Bootstrap support for F7E9Q6 as seed ortholog is 99%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #566. Best score 269 bits
Score difference with first non-orthologous sequence - C.jacchus:269 P.jiroveci:269

F7I1D5              	100.00%		L0PB03              	100.00%
F7IGD2              	36.84%		
Bootstrap support for F7I1D5 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 100%.

Group of orthologs #567. Best score 269 bits
Score difference with first non-orthologous sequence - C.jacchus:269 P.jiroveci:269

F7I1K7              	100.00%		L0PDI2              	100.00%
Bootstrap support for F7I1K7 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #568. Best score 268 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:268

F7FL24              	100.00%		L0PDR6              	100.00%
F7IMN3              	78.74%		
Bootstrap support for F7FL24 as seed ortholog is 99%.
Bootstrap support for L0PDR6 as seed ortholog is 100%.

Group of orthologs #569. Best score 268 bits
Score difference with first non-orthologous sequence - C.jacchus:38 P.jiroveci:87

F7H5V9              	100.00%		L0PDD3              	100.00%
F7I280              	100.00%		
Bootstrap support for F7H5V9 as seed ortholog is 92%.
Bootstrap support for F7I280 as seed ortholog is 93%.
Bootstrap support for L0PDD3 as seed ortholog is 99%.

Group of orthologs #570. Best score 268 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:268

F7HK59              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	57.45%
Bootstrap support for F7HK59 as seed ortholog is 99%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #571. Best score 268 bits
Score difference with first non-orthologous sequence - C.jacchus:268 P.jiroveci:268

F7H0U4              	100.00%		L0PCX5              	100.00%
Bootstrap support for F7H0U4 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #572. Best score 267 bits
Score difference with first non-orthologous sequence - C.jacchus:135 P.jiroveci:267

F7H6Y6              	100.00%		L0PBM0              	100.00%
F6SS06              	11.17%		
Bootstrap support for F7H6Y6 as seed ortholog is 99%.
Bootstrap support for L0PBM0 as seed ortholog is 100%.

Group of orthologs #573. Best score 267 bits
Score difference with first non-orthologous sequence - C.jacchus:182 P.jiroveci:267

F7HSS8              	100.00%		L0PGG0              	100.00%
Bootstrap support for F7HSS8 as seed ortholog is 99%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #574. Best score 266 bits
Score difference with first non-orthologous sequence - C.jacchus:266 P.jiroveci:266

F7ERT2              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	73.33%
Bootstrap support for F7ERT2 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #575. Best score 266 bits
Score difference with first non-orthologous sequence - C.jacchus:266 P.jiroveci:266

F7GVX9              	100.00%		L0P9W3              	100.00%
Bootstrap support for F7GVX9 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #576. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:265 P.jiroveci:265

F6Q887              	100.00%		L0PGD7              	100.00%
F7BPN6              	65.66%		L0PGQ0              	54.71%
F6S5I7              	39.76%		
Bootstrap support for F6Q887 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #577. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:2 P.jiroveci:115

F6YGZ9              	100.00%		L0P6X2              	100.00%
F7IS53              	7.69%		
Bootstrap support for F6YGZ9 as seed ortholog is 52%.
Alternative seed ortholog is F7GNW8 (2 bits away from this cluster)
Bootstrap support for L0P6X2 as seed ortholog is 99%.

Group of orthologs #578. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:146 P.jiroveci:265

F7H843              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	89.95%
Bootstrap support for F7H843 as seed ortholog is 99%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #579. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:265 P.jiroveci:265

F6Y1Y8              	100.00%		L0PAJ2              	100.00%
Bootstrap support for F6Y1Y8 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #580. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:265

F7G5X0              	100.00%		L0PEC0              	100.00%
Bootstrap support for F7G5X0 as seed ortholog is 99%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #581. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:265 P.jiroveci:265

F7IT14              	100.00%		L0PI09              	100.00%
Bootstrap support for F7IT14 as seed ortholog is 100%.
Bootstrap support for L0PI09 as seed ortholog is 100%.

Group of orthologs #582. Best score 264 bits
Score difference with first non-orthologous sequence - C.jacchus:264 P.jiroveci:264

F6S353              	100.00%		L0P9B8              	100.00%
Bootstrap support for F6S353 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #583. Best score 263 bits
Score difference with first non-orthologous sequence - C.jacchus:263 P.jiroveci:263

F7GU02              	100.00%		L0PG08              	100.00%
Bootstrap support for F7GU02 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #584. Best score 262 bits
Score difference with first non-orthologous sequence - C.jacchus:195 P.jiroveci:182

F6Z808              	100.00%		L0PF24              	100.00%
F7GNL2              	87.33%		
F7DRF8              	87.33%		
F6VBL9              	79.19%		
F7CTB1              	24.66%		
Bootstrap support for F6Z808 as seed ortholog is 100%.
Bootstrap support for L0PF24 as seed ortholog is 100%.

Group of orthologs #585. Best score 262 bits
Score difference with first non-orthologous sequence - C.jacchus:212 P.jiroveci:262

F7IS91              	100.00%		L0P8L5              	100.00%
Bootstrap support for F7IS91 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #586. Best score 261 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:261

F6ZZK3              	100.00%		L0PDF9              	100.00%
F7IGR5              	68.00%		
F7IH31              	67.58%		
F7IEF2              	44.21%		
F7HNP2              	42.74%		
F7IC82              	42.11%		
F7I5Q7              	38.74%		
F7I574              	38.53%		
F7IEG6              	12.84%		
F7IC22              	12.21%		
F7I7E6              	11.37%		
Bootstrap support for F6ZZK3 as seed ortholog is 91%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #587. Best score 260 bits
Score difference with first non-orthologous sequence - C.jacchus:260 P.jiroveci:260

F6PQL6              	100.00%		L0PDJ2              	100.00%
Bootstrap support for F6PQL6 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #588. Best score 260 bits
Score difference with first non-orthologous sequence - C.jacchus:260 P.jiroveci:260

F7IIB0              	100.00%		L0PDA9              	100.00%
Bootstrap support for F7IIB0 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #589. Best score 257 bits
Score difference with first non-orthologous sequence - C.jacchus:61 P.jiroveci:206

H9KXG6              	100.00%		L0PH42              	100.00%
F7ILV4              	61.03%		
F7GUE0              	29.58%		
Bootstrap support for H9KXG6 as seed ortholog is 93%.
Bootstrap support for L0PH42 as seed ortholog is 99%.

Group of orthologs #590. Best score 257 bits
Score difference with first non-orthologous sequence - C.jacchus:257 P.jiroveci:257

F6Q6W2              	100.00%		L0PB11              	100.00%
Bootstrap support for F6Q6W2 as seed ortholog is 100%.
Bootstrap support for L0PB11 as seed ortholog is 100%.

Group of orthologs #591. Best score 257 bits
Score difference with first non-orthologous sequence - C.jacchus:257 P.jiroveci:257

F6YQH7              	100.00%		L0PEY5              	100.00%
Bootstrap support for F6YQH7 as seed ortholog is 100%.
Bootstrap support for L0PEY5 as seed ortholog is 100%.

Group of orthologs #592. Best score 257 bits
Score difference with first non-orthologous sequence - C.jacchus:199 P.jiroveci:257

F7GU24              	100.00%		L0P949              	100.00%
Bootstrap support for F7GU24 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #593. Best score 256 bits
Score difference with first non-orthologous sequence - C.jacchus:256 P.jiroveci:256

F6Q8V5              	100.00%		L0PFE1              	100.00%
Bootstrap support for F6Q8V5 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #594. Best score 256 bits
Score difference with first non-orthologous sequence - C.jacchus:157 P.jiroveci:157

F6WFZ4              	100.00%		L0PFK0              	100.00%
Bootstrap support for F6WFZ4 as seed ortholog is 100%.
Bootstrap support for L0PFK0 as seed ortholog is 100%.

Group of orthologs #595. Best score 255 bits
Score difference with first non-orthologous sequence - C.jacchus:255 P.jiroveci:255

F7H895              	100.00%		L0PE74              	100.00%
Bootstrap support for F7H895 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #596. Best score 255 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:192

F7ICV3              	100.00%		L0PFY7              	100.00%
Bootstrap support for F7ICV3 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 100%.

Group of orthologs #597. Best score 254 bits
Score difference with first non-orthologous sequence - C.jacchus:254 P.jiroveci:254

F7IIA5              	100.00%		L0P9F7              	100.00%
F7IEE9              	41.18%		L0PGP0              	82.62%
F7I513              	25.80%		
Bootstrap support for F7IIA5 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #598. Best score 254 bits
Score difference with first non-orthologous sequence - C.jacchus:48 P.jiroveci:254

F6R240              	100.00%		L0PAA3              	100.00%
F6YC58              	53.71%		
Bootstrap support for F6R240 as seed ortholog is 87%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #599. Best score 254 bits
Score difference with first non-orthologous sequence - C.jacchus:254 P.jiroveci:254

F6T5B6              	100.00%		L0P962              	100.00%
Bootstrap support for F6T5B6 as seed ortholog is 100%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #600. Best score 254 bits
Score difference with first non-orthologous sequence - C.jacchus:134 P.jiroveci:254

F7DAR0              	100.00%		L0PAM8              	100.00%
Bootstrap support for F7DAR0 as seed ortholog is 100%.
Bootstrap support for L0PAM8 as seed ortholog is 100%.

Group of orthologs #601. Best score 253 bits
Score difference with first non-orthologous sequence - C.jacchus:201 P.jiroveci:201

F7IDG8              	100.00%		L0P895              	100.00%
F7GNW1              	39.49%		
Bootstrap support for F7IDG8 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 100%.

Group of orthologs #602. Best score 253 bits
Score difference with first non-orthologous sequence - C.jacchus:253 P.jiroveci:253

F6VRZ5              	100.00%		L0P914              	100.00%
Bootstrap support for F6VRZ5 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #603. Best score 253 bits
Score difference with first non-orthologous sequence - C.jacchus:253 P.jiroveci:253

F6WJZ2              	100.00%		L0PFX9              	100.00%
Bootstrap support for F6WJZ2 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #604. Best score 253 bits
Score difference with first non-orthologous sequence - C.jacchus:253 P.jiroveci:253

F7GAQ5              	100.00%		L0P7P7              	100.00%
Bootstrap support for F7GAQ5 as seed ortholog is 100%.
Bootstrap support for L0P7P7 as seed ortholog is 100%.

Group of orthologs #605. Best score 253 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:253

F7II23              	100.00%		L0PFQ3              	100.00%
Bootstrap support for F7II23 as seed ortholog is 99%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #606. Best score 252 bits
Score difference with first non-orthologous sequence - C.jacchus:252 P.jiroveci:252

F6QRM2              	100.00%		L0PF44              	100.00%
Bootstrap support for F6QRM2 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #607. Best score 252 bits
Score difference with first non-orthologous sequence - C.jacchus:252 P.jiroveci:252

F6X2Z7              	100.00%		L0PEN7              	100.00%
Bootstrap support for F6X2Z7 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #608. Best score 250 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:250

F6XQ43              	100.00%		L0PEX1              	100.00%
F7CAR4              	86.45%		
Bootstrap support for F6XQ43 as seed ortholog is 99%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #609. Best score 250 bits
Score difference with first non-orthologous sequence - C.jacchus:250 P.jiroveci:250

F7I1M4              	100.00%		L0PDN4              	100.00%
F6PXP9              	33.64%		
Bootstrap support for F7I1M4 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #610. Best score 250 bits
Score difference with first non-orthologous sequence - C.jacchus:198 P.jiroveci:250

F6XPV5              	100.00%		L0PFC0              	100.00%
Bootstrap support for F6XPV5 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #611. Best score 250 bits
Score difference with first non-orthologous sequence - C.jacchus:250 P.jiroveci:250

F7F465              	100.00%		L0PCC1              	100.00%
Bootstrap support for F7F465 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #612. Best score 249 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:172

F6U1J7              	100.00%		L0PA17              	100.00%
Bootstrap support for F6U1J7 as seed ortholog is 99%.
Bootstrap support for L0PA17 as seed ortholog is 100%.

Group of orthologs #613. Best score 249 bits
Score difference with first non-orthologous sequence - C.jacchus:249 P.jiroveci:249

F6X8U6              	100.00%		L0PA24              	100.00%
Bootstrap support for F6X8U6 as seed ortholog is 100%.
Bootstrap support for L0PA24 as seed ortholog is 100%.

Group of orthologs #614. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:157

F7HWE6              	100.00%		L0P876              	100.00%
F6ZLL8              	64.18%		
F6QMS1              	59.70%		
F7I4I7              	56.72%		
Bootstrap support for F7HWE6 as seed ortholog is 99%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #615. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:151 P.jiroveci:248

F6PHS2              	100.00%		L0PCQ6              	100.00%
Bootstrap support for F6PHS2 as seed ortholog is 99%.
Bootstrap support for L0PCQ6 as seed ortholog is 100%.

Group of orthologs #616. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:248 P.jiroveci:192

F7A2V0              	100.00%		L0PBY9              	100.00%
Bootstrap support for F7A2V0 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 99%.

Group of orthologs #617. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:248 P.jiroveci:248

F7E7H2              	100.00%		L0PET8              	100.00%
Bootstrap support for F7E7H2 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #618. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:248 P.jiroveci:248

F7G7V6              	100.00%		L0PES4              	100.00%
Bootstrap support for F7G7V6 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #619. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:248 P.jiroveci:248

F7HX28              	100.00%		L0PHK5              	100.00%
Bootstrap support for F7HX28 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #620. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:177 P.jiroveci:248

F7IJJ0              	100.00%		L0PBS3              	100.00%
Bootstrap support for F7IJJ0 as seed ortholog is 99%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #621. Best score 248 bits
Score difference with first non-orthologous sequence - C.jacchus:248 P.jiroveci:248

F7ITC7              	100.00%		L0PG86              	100.00%
Bootstrap support for F7ITC7 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #622. Best score 247 bits
Score difference with first non-orthologous sequence - C.jacchus:199 P.jiroveci:247

F6RTH7              	100.00%		L0PE61              	100.00%
Bootstrap support for F6RTH7 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #623. Best score 246 bits
Score difference with first non-orthologous sequence - C.jacchus:246 P.jiroveci:246

F7GG88              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	61.76%
Bootstrap support for F7GG88 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #624. Best score 246 bits
Score difference with first non-orthologous sequence - C.jacchus:246 P.jiroveci:246

F7I709              	100.00%		L0PCR8              	100.00%
                    	       		L0PH75              	90.68%
Bootstrap support for F7I709 as seed ortholog is 100%.
Bootstrap support for L0PCR8 as seed ortholog is 100%.

Group of orthologs #625. Best score 246 bits
Score difference with first non-orthologous sequence - C.jacchus:246 P.jiroveci:246

F7IEY3              	100.00%		L0PCY0              	100.00%
F7I9N3              	89.15%		
Bootstrap support for F7IEY3 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #626. Best score 246 bits
Score difference with first non-orthologous sequence - C.jacchus:246 P.jiroveci:246

F7B8M4              	100.00%		L0PG93              	100.00%
Bootstrap support for F7B8M4 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 100%.

Group of orthologs #627. Best score 246 bits
Score difference with first non-orthologous sequence - C.jacchus:34 P.jiroveci:122

F7BFT9              	100.00%		L0PGH8              	100.00%
Bootstrap support for F7BFT9 as seed ortholog is 76%.
Bootstrap support for L0PGH8 as seed ortholog is 99%.

Group of orthologs #628. Best score 246 bits
Score difference with first non-orthologous sequence - C.jacchus:246 P.jiroveci:246

F7IBM8              	100.00%		L0P9P0              	100.00%
Bootstrap support for F7IBM8 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #629. Best score 245 bits
Score difference with first non-orthologous sequence - C.jacchus:245 P.jiroveci:245

F7EFP4              	100.00%		L0PAG8              	100.00%
Bootstrap support for F7EFP4 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #630. Best score 244 bits
Score difference with first non-orthologous sequence - C.jacchus:244 P.jiroveci:244

H9KVK2              	100.00%		L0P8N3              	100.00%
Bootstrap support for H9KVK2 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #631. Best score 243 bits
Score difference with first non-orthologous sequence - C.jacchus:127 P.jiroveci:243

F7ABQ4              	100.00%		L0P896              	100.00%
F7H002              	71.70%		
Bootstrap support for F7ABQ4 as seed ortholog is 99%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #632. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F7H0J9              	100.00%		L0P7H2              	100.00%
F7HUL1              	80.95%		
F7H5E7              	43.92%		
Bootstrap support for F7H0J9 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #633. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:197 P.jiroveci:242

F7H2J7              	100.00%		L0P6P2              	100.00%
F7H351              	27.05%		
F7IGT0              	16.67%		
Bootstrap support for F7H2J7 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #634. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F6R8Q1              	100.00%		L0P9J6              	100.00%
                    	       		L0PH67              	86.72%
Bootstrap support for F6R8Q1 as seed ortholog is 100%.
Bootstrap support for L0P9J6 as seed ortholog is 100%.

Group of orthologs #635. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F7I4E9              	100.00%		L0PCH0              	100.00%
F7I8J4              	35.99%		
Bootstrap support for F7I4E9 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #636. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F6X0B1              	100.00%		L0P9R7              	100.00%
Bootstrap support for F6X0B1 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 100%.

Group of orthologs #637. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F6VZ52              	100.00%		L0PGQ4              	100.00%
Bootstrap support for F6VZ52 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #638. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F7HWI7              	100.00%		L0PBG0              	100.00%
Bootstrap support for F7HWI7 as seed ortholog is 100%.
Bootstrap support for L0PBG0 as seed ortholog is 100%.

Group of orthologs #639. Best score 242 bits
Score difference with first non-orthologous sequence - C.jacchus:242 P.jiroveci:242

F7IJC1              	100.00%		L0P784              	100.00%
Bootstrap support for F7IJC1 as seed ortholog is 100%.
Bootstrap support for L0P784 as seed ortholog is 100%.

Group of orthologs #640. Best score 241 bits
Score difference with first non-orthologous sequence - C.jacchus:241 P.jiroveci:241

F6SFK4              	100.00%		L0P8F0              	100.00%
F7HKF7              	92.82%		
Bootstrap support for F6SFK4 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #641. Best score 241 bits
Score difference with first non-orthologous sequence - C.jacchus:241 P.jiroveci:241

F7GN90              	100.00%		L0PID4              	100.00%
                    	       		L0PGF7              	32.99%
Bootstrap support for F7GN90 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #642. Best score 241 bits
Score difference with first non-orthologous sequence - C.jacchus:241 P.jiroveci:241

F6ZS95              	100.00%		L0PCG1              	100.00%
Bootstrap support for F6ZS95 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 100%.

Group of orthologs #643. Best score 241 bits
Score difference with first non-orthologous sequence - C.jacchus:241 P.jiroveci:241

F7BWS5              	100.00%		L0PF73              	100.00%
Bootstrap support for F7BWS5 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #644. Best score 240 bits
Score difference with first non-orthologous sequence - C.jacchus:240 P.jiroveci:240

F6VZL4              	100.00%		L0PBA4              	100.00%
Bootstrap support for F6VZL4 as seed ortholog is 100%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #645. Best score 239 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:146

F7GT20              	100.00%		L0P9F9              	100.00%
Bootstrap support for F7GT20 as seed ortholog is 100%.
Bootstrap support for L0P9F9 as seed ortholog is 100%.

Group of orthologs #646. Best score 238 bits
Score difference with first non-orthologous sequence - C.jacchus:238 P.jiroveci:238

F6QXL5              	100.00%		L0PGN8              	100.00%
Bootstrap support for F6QXL5 as seed ortholog is 100%.
Bootstrap support for L0PGN8 as seed ortholog is 100%.

Group of orthologs #647. Best score 238 bits
Score difference with first non-orthologous sequence - C.jacchus:238 P.jiroveci:238

F7FE38              	100.00%		L0PB61              	100.00%
Bootstrap support for F7FE38 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #648. Best score 238 bits
Score difference with first non-orthologous sequence - C.jacchus:238 P.jiroveci:238

F7GQH4              	100.00%		L0PDH2              	100.00%
Bootstrap support for F7GQH4 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #649. Best score 237 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:237

F7HAW7              	100.00%		L0PBZ6              	100.00%
F6T766              	59.15%		
F6QLQ0              	50.61%		
F6QV75              	48.78%		
F7HJD4              	39.02%		
F7HXZ8              	17.68%		
F7EL98              	6.10%		
Bootstrap support for F7HAW7 as seed ortholog is 99%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #650. Best score 237 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:237

F7I089              	100.00%		L0PE58              	100.00%
F7FGD8              	79.71%		
F6T5U9              	66.67%		
F7HQY7              	63.77%		
F6XW33              	13.04%		
Bootstrap support for F7I089 as seed ortholog is 99%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #651. Best score 237 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F7H9U4              	100.00%		L0PFE3              	100.00%
F7FWT9              	45.19%		
F7A9I9              	39.95%		
F7ATK6              	37.83%		
Bootstrap support for F7H9U4 as seed ortholog is 99%.
Bootstrap support for L0PFE3 as seed ortholog is 99%.

Group of orthologs #652. Best score 237 bits
Score difference with first non-orthologous sequence - C.jacchus:237 P.jiroveci:237

F7GW73              	100.00%		L0PB86              	100.00%
Bootstrap support for F7GW73 as seed ortholog is 100%.
Bootstrap support for L0PB86 as seed ortholog is 100%.

Group of orthologs #653. Best score 236 bits
Score difference with first non-orthologous sequence - C.jacchus:236 P.jiroveci:236

F6T6M4              	100.00%		L0PEC6              	100.00%
Bootstrap support for F6T6M4 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #654. Best score 236 bits
Score difference with first non-orthologous sequence - C.jacchus:236 P.jiroveci:236

F7E1A3              	100.00%		L0PBP9              	100.00%
Bootstrap support for F7E1A3 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #655. Best score 236 bits
Score difference with first non-orthologous sequence - C.jacchus:120 P.jiroveci:236

F7DMI4              	100.00%		L0PEJ9              	100.00%
Bootstrap support for F7DMI4 as seed ortholog is 99%.
Bootstrap support for L0PEJ9 as seed ortholog is 100%.

Group of orthologs #656. Best score 236 bits
Score difference with first non-orthologous sequence - C.jacchus:236 P.jiroveci:236

F7INQ9              	100.00%		L0P834              	100.00%
Bootstrap support for F7INQ9 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #657. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:118 P.jiroveci:235

F7DQD5              	100.00%		L0PCI8              	100.00%
F7I3E2              	48.42%		
F7HUR9              	26.95%		
F7HC41              	6.11%		
Bootstrap support for F7DQD5 as seed ortholog is 99%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #658. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:235 P.jiroveci:235

F6S2Z4              	100.00%		L0PHL0              	100.00%
Bootstrap support for F6S2Z4 as seed ortholog is 100%.
Bootstrap support for L0PHL0 as seed ortholog is 100%.

Group of orthologs #659. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:235 P.jiroveci:235

F7BT00              	100.00%		L0P9N2              	100.00%
Bootstrap support for F7BT00 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #660. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:112 P.jiroveci:175

F6Z9A4              	100.00%		L0PGN9              	100.00%
Bootstrap support for F6Z9A4 as seed ortholog is 99%.
Bootstrap support for L0PGN9 as seed ortholog is 99%.

Group of orthologs #661. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:235 P.jiroveci:235

F7H9V0              	100.00%		L0PG68              	100.00%
Bootstrap support for F7H9V0 as seed ortholog is 100%.
Bootstrap support for L0PG68 as seed ortholog is 100%.

Group of orthologs #662. Best score 234 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:234

F7EPT1              	100.00%		L0PEW5              	100.00%
Bootstrap support for F7EPT1 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #663. Best score 233 bits
Score difference with first non-orthologous sequence - C.jacchus:233 P.jiroveci:233

F7IBC3              	100.00%		L0PD38              	100.00%
F7GR37              	38.87%		
Bootstrap support for F7IBC3 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #664. Best score 233 bits
Score difference with first non-orthologous sequence - C.jacchus:233 P.jiroveci:233

F7IS34              	100.00%		L0P9G1              	100.00%
F7EMD2              	72.46%		
Bootstrap support for F7IS34 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #665. Best score 233 bits
Score difference with first non-orthologous sequence - C.jacchus:233 P.jiroveci:233

F6VCY1              	100.00%		L0P8K8              	100.00%
Bootstrap support for F6VCY1 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #666. Best score 233 bits
Score difference with first non-orthologous sequence - C.jacchus:233 P.jiroveci:233

F6VLK0              	100.00%		L0PD44              	100.00%
Bootstrap support for F6VLK0 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #667. Best score 232 bits
Score difference with first non-orthologous sequence - C.jacchus:2 P.jiroveci:232

F6ZL25              	100.00%		L0PC75              	100.00%
F7EJ58              	100.00%		
F7IH99              	48.77%		
F6YXV9              	28.40%		
F6W6H3              	24.69%		
Bootstrap support for F6ZL25 as seed ortholog is 45%.
Alternative seed ortholog is F6WGH1 (2 bits away from this cluster)
Bootstrap support for F7EJ58 as seed ortholog is 55%.
Alternative seed ortholog is F6WGH1 (2 bits away from this cluster)
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #668. Best score 232 bits
Score difference with first non-orthologous sequence - C.jacchus:232 P.jiroveci:232

F6YAH8              	100.00%		L0PG16              	100.00%
F7I4M0              	50.64%		
F7I8M6              	35.59%		
F6ZQS7              	29.80%		
Bootstrap support for F6YAH8 as seed ortholog is 100%.
Bootstrap support for L0PG16 as seed ortholog is 100%.

Group of orthologs #669. Best score 232 bits
Score difference with first non-orthologous sequence - C.jacchus:232 P.jiroveci:232

F6VDA5              	100.00%		L0P9N8              	100.00%
Bootstrap support for F6VDA5 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 100%.

Group of orthologs #670. Best score 232 bits
Score difference with first non-orthologous sequence - C.jacchus:232 P.jiroveci:232

F7F537              	100.00%		L0P9M9              	100.00%
Bootstrap support for F7F537 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #671. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:231

F7I796              	100.00%		L0PFZ1              	100.00%
F7BIH0              	84.97%		
F7ILJ6              	78.67%		
F6UVT7              	53.67%		
F7I806              	48.60%		
F6S917              	48.60%		
F7HAP7              	16.78%		
F7ART9              	14.69%		
F7I6J0              	11.54%		
Bootstrap support for F7I796 as seed ortholog is 89%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #672. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:231 P.jiroveci:231

F7H6F1              	100.00%		L0PHL1              	100.00%
F7DXL4              	96.72%		
H9KXV1              	19.67%		
Bootstrap support for F7H6F1 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #673. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:231 P.jiroveci:231

F7HJB3              	100.00%		L0PFE6              	100.00%
F7IL93              	39.29%		
Bootstrap support for F7HJB3 as seed ortholog is 100%.
Bootstrap support for L0PFE6 as seed ortholog is 100%.

Group of orthologs #674. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:231 P.jiroveci:231

F7HYW5              	100.00%		L0P9L7              	100.00%
Bootstrap support for F7HYW5 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #675. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:231

F7HZ96              	100.00%		L0PAG1              	100.00%
Bootstrap support for F7HZ96 as seed ortholog is 98%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #676. Best score 230 bits
Score difference with first non-orthologous sequence - C.jacchus:230 P.jiroveci:230

F7DTZ8              	100.00%		L0PH55              	100.00%
F7HWF8              	100.00%		
F7HQY0              	56.67%		
Bootstrap support for F7DTZ8 as seed ortholog is 100%.
Bootstrap support for F7HWF8 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #677. Best score 230 bits
Score difference with first non-orthologous sequence - C.jacchus:230 P.jiroveci:230

F7I0Q0              	100.00%		L0PBV6              	100.00%
F7GX06              	24.61%		
Bootstrap support for F7I0Q0 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #678. Best score 230 bits
Score difference with first non-orthologous sequence - C.jacchus:230 P.jiroveci:230

F6XT45              	100.00%		L0P9Y7              	100.00%
Bootstrap support for F6XT45 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #679. Best score 230 bits
Score difference with first non-orthologous sequence - C.jacchus:230 P.jiroveci:230

F7HNP5              	100.00%		L0PAZ5              	100.00%
Bootstrap support for F7HNP5 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #680. Best score 230 bits
Score difference with first non-orthologous sequence - C.jacchus:230 P.jiroveci:52

F7I307              	100.00%		L0PAQ7              	100.00%
Bootstrap support for F7I307 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 95%.

Group of orthologs #681. Best score 229 bits
Score difference with first non-orthologous sequence - C.jacchus:229 P.jiroveci:229

F6YHG0              	100.00%		L0PG81              	100.00%
Bootstrap support for F6YHG0 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #682. Best score 229 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:229

F7H6J7              	100.00%		L0PGL3              	100.00%
Bootstrap support for F7H6J7 as seed ortholog is 98%.
Bootstrap support for L0PGL3 as seed ortholog is 100%.

Group of orthologs #683. Best score 229 bits
Score difference with first non-orthologous sequence - C.jacchus:229 P.jiroveci:229

F7HZE4              	100.00%		L0PGT2              	100.00%
Bootstrap support for F7HZE4 as seed ortholog is 100%.
Bootstrap support for L0PGT2 as seed ortholog is 100%.

Group of orthologs #684. Best score 228 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:228

F7HA27              	100.00%		L0PA86              	100.00%
F7GY27              	99.11%		
F7IGD4              	96.89%		
F6U3Y4              	37.78%		
F7I2S7              	14.22%		
Bootstrap support for F7HA27 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #685. Best score 228 bits
Score difference with first non-orthologous sequence - C.jacchus:132 P.jiroveci:228

F6ZTF7              	100.00%		L0PEQ4              	100.00%
Bootstrap support for F6ZTF7 as seed ortholog is 99%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #686. Best score 228 bits
Score difference with first non-orthologous sequence - C.jacchus:228 P.jiroveci:228

F7HN98              	100.00%		L0PE89              	100.00%
Bootstrap support for F7HN98 as seed ortholog is 100%.
Bootstrap support for L0PE89 as seed ortholog is 100%.

Group of orthologs #687. Best score 228 bits
Score difference with first non-orthologous sequence - C.jacchus:154 P.jiroveci:228

F7IP73              	100.00%		L0PDB9              	100.00%
Bootstrap support for F7IP73 as seed ortholog is 99%.
Bootstrap support for L0PDB9 as seed ortholog is 100%.

Group of orthologs #688. Best score 227 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:78

F6RB87              	100.00%		L0PGE5              	100.00%
F6YJ52              	84.62%		
F7BVX5              	9.47%		
Bootstrap support for F6RB87 as seed ortholog is 97%.
Bootstrap support for L0PGE5 as seed ortholog is 99%.

Group of orthologs #689. Best score 226 bits
Score difference with first non-orthologous sequence - C.jacchus:226 P.jiroveci:226

F6YHU5              	100.00%		L0PBT0              	100.00%
Bootstrap support for F6YHU5 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #690. Best score 226 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:226

F7DMX3              	100.00%		L0P9I3              	100.00%
Bootstrap support for F7DMX3 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #691. Best score 226 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:226

F7BLU0              	100.00%		L0PGD9              	100.00%
Bootstrap support for F7BLU0 as seed ortholog is 99%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #692. Best score 226 bits
Score difference with first non-orthologous sequence - C.jacchus:226 P.jiroveci:226

F7I0Y5              	100.00%		L0PBC7              	100.00%
Bootstrap support for F7I0Y5 as seed ortholog is 100%.
Bootstrap support for L0PBC7 as seed ortholog is 100%.

Group of orthologs #693. Best score 225 bits
Score difference with first non-orthologous sequence - C.jacchus:225 P.jiroveci:225

F7I9G2              	100.00%		L0PGY0              	100.00%
F7H190              	87.58%		
F7HPX4              	84.97%		
H9KXW0              	75.16%		
F7ELL5              	72.55%		
F7HW20              	11.11%		
F6Q3N9              	7.84%		
Bootstrap support for F7I9G2 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #694. Best score 225 bits
Score difference with first non-orthologous sequence - C.jacchus:225 P.jiroveci:225

F7IH12              	100.00%		L0PBS5              	100.00%
F7HUZ7              	96.05%		
Bootstrap support for F7IH12 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #695. Best score 224 bits
Score difference with first non-orthologous sequence - C.jacchus:224 P.jiroveci:224

F7HX08              	100.00%		L0P9Q8              	100.00%
F7I5I8              	32.40%		
F7DJJ7              	26.66%		
Bootstrap support for F7HX08 as seed ortholog is 100%.
Bootstrap support for L0P9Q8 as seed ortholog is 100%.

Group of orthologs #696. Best score 224 bits
Score difference with first non-orthologous sequence - C.jacchus:224 P.jiroveci:224

F6U7Z4              	100.00%		L0P9I2              	100.00%
Bootstrap support for F6U7Z4 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #697. Best score 224 bits
Score difference with first non-orthologous sequence - C.jacchus:224 P.jiroveci:224

F7CJG0              	100.00%		L0P901              	100.00%
Bootstrap support for F7CJG0 as seed ortholog is 100%.
Bootstrap support for L0P901 as seed ortholog is 100%.

Group of orthologs #698. Best score 224 bits
Score difference with first non-orthologous sequence - C.jacchus:224 P.jiroveci:4

F7BA05              	100.00%		L0PD43              	100.00%
Bootstrap support for F7BA05 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 59%.
Alternative seed ortholog is L0PB48 (4 bits away from this cluster)

Group of orthologs #699. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:223 P.jiroveci:223

F6PL51              	100.00%		L0PAJ0              	100.00%
F6YZY7              	51.42%		
Bootstrap support for F6PL51 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #700. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:223 P.jiroveci:223

F6UKS2              	100.00%		L0P968              	100.00%
F7FWP5              	7.90%		
Bootstrap support for F6UKS2 as seed ortholog is 100%.
Bootstrap support for L0P968 as seed ortholog is 100%.

Group of orthologs #701. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:223 P.jiroveci:223

F6PIQ2              	100.00%		L0PD58              	100.00%
Bootstrap support for F6PIQ2 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #702. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:223 P.jiroveci:223

F6ZI94              	100.00%		L0PBZ1              	100.00%
Bootstrap support for F6ZI94 as seed ortholog is 100%.
Bootstrap support for L0PBZ1 as seed ortholog is 100%.

Group of orthologs #703. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:223 P.jiroveci:223

F7HKW6              	100.00%		L0PA36              	100.00%
Bootstrap support for F7HKW6 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #704. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:112 P.jiroveci:223

F7HW86              	100.00%		L0PE21              	100.00%
Bootstrap support for F7HW86 as seed ortholog is 99%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #705. Best score 222 bits
Score difference with first non-orthologous sequence - C.jacchus:222 P.jiroveci:222

F7FF65              	100.00%		L0PI61              	100.00%
F6YV36              	79.15%		L0PA50              	18.89%
F6WFH1              	60.00%		
F7H8J2              	50.37%		
Bootstrap support for F7FF65 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #706. Best score 222 bits
Score difference with first non-orthologous sequence - C.jacchus:222 P.jiroveci:222

F7G4M3              	100.00%		L0PC20              	100.00%
F7GZB7              	30.04%		
Bootstrap support for F7G4M3 as seed ortholog is 100%.
Bootstrap support for L0PC20 as seed ortholog is 100%.

Group of orthologs #707. Best score 222 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:222

F7H0V3              	100.00%		L0PE77              	100.00%
Bootstrap support for F7H0V3 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #708. Best score 222 bits
Score difference with first non-orthologous sequence - C.jacchus:222 P.jiroveci:222

F7HA65              	100.00%		L0PGD6              	100.00%
Bootstrap support for F7HA65 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #709. Best score 222 bits
Score difference with first non-orthologous sequence - C.jacchus:222 P.jiroveci:222

F7I4T4              	100.00%		L0PGE7              	100.00%
Bootstrap support for F7I4T4 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #710. Best score 221 bits
Score difference with first non-orthologous sequence - C.jacchus:221 P.jiroveci:221

F6RTL3              	100.00%		L0PA05              	100.00%
Bootstrap support for F6RTL3 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 100%.

Group of orthologs #711. Best score 220 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:161

F7AX64              	100.00%		L0PHW8              	100.00%
F7BSW8              	48.67%		
F6R284              	12.33%		
Bootstrap support for F7AX64 as seed ortholog is 100%.
Bootstrap support for L0PHW8 as seed ortholog is 100%.

Group of orthologs #712. Best score 220 bits
Score difference with first non-orthologous sequence - C.jacchus:220 P.jiroveci:220

F7EL42              	100.00%		L0PFR9              	100.00%
F7GXE1              	22.91%		
Bootstrap support for F7EL42 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #713. Best score 220 bits
Score difference with first non-orthologous sequence - C.jacchus:54 P.jiroveci:144

F6RX83              	100.00%		L0PHH9              	100.00%
Bootstrap support for F6RX83 as seed ortholog is 98%.
Bootstrap support for L0PHH9 as seed ortholog is 100%.

Group of orthologs #714. Best score 219 bits
Score difference with first non-orthologous sequence - C.jacchus:219 P.jiroveci:219

F6UMI3              	100.00%		L0PDP2              	100.00%
Bootstrap support for F6UMI3 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #715. Best score 219 bits
Score difference with first non-orthologous sequence - C.jacchus:219 P.jiroveci:219

F7HJ75              	100.00%		L0PCJ8              	100.00%
Bootstrap support for F7HJ75 as seed ortholog is 100%.
Bootstrap support for L0PCJ8 as seed ortholog is 100%.

Group of orthologs #716. Best score 219 bits
Score difference with first non-orthologous sequence - C.jacchus:39 P.jiroveci:27

F7I0H3              	100.00%		L0PFJ7              	100.00%
Bootstrap support for F7I0H3 as seed ortholog is 76%.
Bootstrap support for L0PFJ7 as seed ortholog is 69%.
Alternative seed ortholog is L0PBC8 (27 bits away from this cluster)

Group of orthologs #717. Best score 218 bits
Score difference with first non-orthologous sequence - C.jacchus:156 P.jiroveci:218

F7A9X8              	100.00%		L0PBD5              	100.00%
Bootstrap support for F7A9X8 as seed ortholog is 99%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #718. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:217

F7DRS6              	100.00%		L0PCU0              	100.00%
F7HAY8              	88.89%		
Bootstrap support for F7DRS6 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #719. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:217

F7HAB8              	100.00%		L0PCF4              	100.00%
                    	       		L0P926              	60.51%
Bootstrap support for F7HAB8 as seed ortholog is 100%.
Bootstrap support for L0PCF4 as seed ortholog is 100%.

Group of orthologs #720. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:217

F7EIX8              	100.00%		L0PBK8              	100.00%
Bootstrap support for F7EIX8 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #721. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:217

F7H4P4              	100.00%		L0P910              	100.00%
Bootstrap support for F7H4P4 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #722. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:217

F7I5L3              	100.00%		L0PDR1              	100.00%
Bootstrap support for F7I5L3 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 100%.

Group of orthologs #723. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 P.jiroveci:217

F7I8U3              	100.00%		L0PDX6              	100.00%
Bootstrap support for F7I8U3 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #724. Best score 216 bits
Score difference with first non-orthologous sequence - C.jacchus:216 P.jiroveci:216

F6Q6X1              	100.00%		L0P9K2              	100.00%
Bootstrap support for F6Q6X1 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #725. Best score 216 bits
Score difference with first non-orthologous sequence - C.jacchus:48 P.jiroveci:216

F6XHG9              	100.00%		L0P8Q5              	100.00%
Bootstrap support for F6XHG9 as seed ortholog is 84%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #726. Best score 216 bits
Score difference with first non-orthologous sequence - C.jacchus:216 P.jiroveci:216

F7GX58              	100.00%		L0PFS1              	100.00%
Bootstrap support for F7GX58 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #727. Best score 215 bits
Score difference with first non-orthologous sequence - C.jacchus:72 P.jiroveci:215

F7FSL9              	100.00%		L0P848              	100.00%
F7H3C8              	37.01%		L0P867              	89.77%
Bootstrap support for F7FSL9 as seed ortholog is 95%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #728. Best score 215 bits
Score difference with first non-orthologous sequence - C.jacchus:137 P.jiroveci:215

F7AN83              	100.00%		L0PAW4              	100.00%
F7I611              	53.24%		
Bootstrap support for F7AN83 as seed ortholog is 99%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #729. Best score 215 bits
Score difference with first non-orthologous sequence - C.jacchus:215 P.jiroveci:215

F7HYT1              	100.00%		L0PFP0              	100.00%
F7HMC4              	37.85%		
Bootstrap support for F7HYT1 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #730. Best score 215 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:117

F7IPE9              	100.00%		L0PDB8              	100.00%
F7HAY4              	93.51%		
Bootstrap support for F7IPE9 as seed ortholog is 96%.
Bootstrap support for L0PDB8 as seed ortholog is 99%.

Group of orthologs #731. Best score 215 bits
Score difference with first non-orthologous sequence - C.jacchus:121 P.jiroveci:164

F7G4G0              	100.00%		L0PFE0              	100.00%
Bootstrap support for F7G4G0 as seed ortholog is 99%.
Bootstrap support for L0PFE0 as seed ortholog is 99%.

Group of orthologs #732. Best score 214 bits
Score difference with first non-orthologous sequence - C.jacchus:214 P.jiroveci:214

F7E9G1              	100.00%		L0PFL8              	100.00%
B0KW94              	95.31%		
F7F1T0              	91.25%		
F7FU05              	88.12%		
F7HAW9              	86.56%		
F7I2X0              	84.69%		
F7CTR1              	84.38%		
F7HSQ5              	46.88%		
F7D6I1              	38.75%		
F6ZL10              	30.63%		
Bootstrap support for F7E9G1 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #733. Best score 214 bits
Score difference with first non-orthologous sequence - C.jacchus:98 P.jiroveci:214

F7IPV5              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	51.34%
Bootstrap support for F7IPV5 as seed ortholog is 99%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #734. Best score 213 bits
Score difference with first non-orthologous sequence - C.jacchus:213 P.jiroveci:82

F7I687              	100.00%		L0PDS3              	100.00%
F7I0K8              	40.05%		
F7DP54              	34.71%		
Bootstrap support for F7I687 as seed ortholog is 100%.
Bootstrap support for L0PDS3 as seed ortholog is 98%.

Group of orthologs #735. Best score 213 bits
Score difference with first non-orthologous sequence - C.jacchus:100 P.jiroveci:213

F7HDP5              	100.00%		L0PD63              	100.00%
Bootstrap support for F7HDP5 as seed ortholog is 99%.
Bootstrap support for L0PD63 as seed ortholog is 100%.

Group of orthologs #736. Best score 213 bits
Score difference with first non-orthologous sequence - C.jacchus:213 P.jiroveci:213

F7INI5              	100.00%		L0PG39              	100.00%
Bootstrap support for F7INI5 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #737. Best score 212 bits
Score difference with first non-orthologous sequence - C.jacchus:212 P.jiroveci:212

F6PPW3              	100.00%		L0PC53              	100.00%
F7H062              	95.85%		
F7HQ86              	93.55%		
Bootstrap support for F6PPW3 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #738. Best score 212 bits
Score difference with first non-orthologous sequence - C.jacchus:212 P.jiroveci:212

F7IKG7              	100.00%		L0PFU0              	100.00%
Bootstrap support for F7IKG7 as seed ortholog is 100%.
Bootstrap support for L0PFU0 as seed ortholog is 100%.

Group of orthologs #739. Best score 211 bits
Score difference with first non-orthologous sequence - C.jacchus:83 P.jiroveci:130

F7I4G2              	100.00%		L0PFI0              	100.00%
F6R1X1              	35.57%		
Bootstrap support for F7I4G2 as seed ortholog is 96%.
Bootstrap support for L0PFI0 as seed ortholog is 99%.

Group of orthologs #740. Best score 211 bits
Score difference with first non-orthologous sequence - C.jacchus:132 P.jiroveci:139

F7D4Y2              	100.00%		L0PDB2              	100.00%
Bootstrap support for F7D4Y2 as seed ortholog is 99%.
Bootstrap support for L0PDB2 as seed ortholog is 99%.

Group of orthologs #741. Best score 210 bits
Score difference with first non-orthologous sequence - C.jacchus:210 P.jiroveci:210

F6RB15              	100.00%		L0PAL5              	100.00%
Bootstrap support for F6RB15 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #742. Best score 210 bits
Score difference with first non-orthologous sequence - C.jacchus:210 P.jiroveci:210

F6YNW2              	100.00%		L0PD65              	100.00%
Bootstrap support for F6YNW2 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #743. Best score 210 bits
Score difference with first non-orthologous sequence - C.jacchus:210 P.jiroveci:210

F7BU83              	100.00%		L0P9U1              	100.00%
Bootstrap support for F7BU83 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #744. Best score 210 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:103

F7GQQ2              	100.00%		L0PFN2              	100.00%
Bootstrap support for F7GQQ2 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #745. Best score 209 bits
Score difference with first non-orthologous sequence - C.jacchus:209 P.jiroveci:209

F7CAZ0              	100.00%		L0PCB3              	100.00%
Bootstrap support for F7CAZ0 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #746. Best score 209 bits
Score difference with first non-orthologous sequence - C.jacchus:125 P.jiroveci:139

F7FL49              	100.00%		L0PAZ8              	100.00%
Bootstrap support for F7FL49 as seed ortholog is 99%.
Bootstrap support for L0PAZ8 as seed ortholog is 99%.

Group of orthologs #747. Best score 209 bits
Score difference with first non-orthologous sequence - C.jacchus:209 P.jiroveci:209

F7GX92              	100.00%		L0PEL2              	100.00%
Bootstrap support for F7GX92 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #748. Best score 209 bits
Score difference with first non-orthologous sequence - C.jacchus:209 P.jiroveci:209

F7HQF6              	100.00%		L0PD18              	100.00%
Bootstrap support for F7HQF6 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #749. Best score 208 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:208

F6TQK9              	100.00%		L0PCY2              	100.00%
Bootstrap support for F6TQK9 as seed ortholog is 89%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #750. Best score 208 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:91

F6T912              	100.00%		L0PG51              	100.00%
Bootstrap support for F6T912 as seed ortholog is 86%.
Bootstrap support for L0PG51 as seed ortholog is 98%.

Group of orthologs #751. Best score 208 bits
Score difference with first non-orthologous sequence - C.jacchus:53 P.jiroveci:208

F7AS95              	100.00%		L0PAE8              	100.00%
Bootstrap support for F7AS95 as seed ortholog is 99%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #752. Best score 207 bits
Score difference with first non-orthologous sequence - C.jacchus:54 P.jiroveci:207

F7HAU7              	100.00%		L0PB66              	100.00%
F7ENJ3              	94.64%		
H9KXP5              	67.86%		
F7CWR3              	60.71%		
F7HF15              	48.21%		
F7I227              	39.29%		
Bootstrap support for F7HAU7 as seed ortholog is 99%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #753. Best score 207 bits
Score difference with first non-orthologous sequence - C.jacchus:207 P.jiroveci:207

F7IF47              	100.00%		L0PHH2              	100.00%
Bootstrap support for F7IF47 as seed ortholog is 100%.
Bootstrap support for L0PHH2 as seed ortholog is 100%.

Group of orthologs #754. Best score 206 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:97

F7G5X5              	100.00%		L0PDC4              	100.00%
                    	       		L0PBK4              	5.69%
Bootstrap support for F7G5X5 as seed ortholog is 99%.
Bootstrap support for L0PDC4 as seed ortholog is 99%.

Group of orthologs #755. Best score 205 bits
Score difference with first non-orthologous sequence - C.jacchus:205 P.jiroveci:205

F7EZL4              	100.00%		L0PC18              	100.00%
H9KXS3              	99.45%		
F7I9C5              	98.90%		
F7GPM8              	97.24%		
F7IGX0              	96.69%		
F7IKU3              	78.45%		
F7HV41              	77.90%		
F7FV65              	35.36%		
Bootstrap support for F7EZL4 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #756. Best score 205 bits
Score difference with first non-orthologous sequence - C.jacchus:205 P.jiroveci:205

F6ZFR0              	100.00%		L0P7B5              	100.00%
F7DH24              	53.42%		
Bootstrap support for F6ZFR0 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #757. Best score 205 bits
Score difference with first non-orthologous sequence - C.jacchus:135 P.jiroveci:205

F6ZUS5              	100.00%		L0P839              	100.00%
F7I2S5              	20.14%		
Bootstrap support for F6ZUS5 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #758. Best score 205 bits
Score difference with first non-orthologous sequence - C.jacchus:205 P.jiroveci:205

F6Q2W7              	100.00%		L0P723              	100.00%
Bootstrap support for F6Q2W7 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #759. Best score 204 bits
Score difference with first non-orthologous sequence - C.jacchus:14 P.jiroveci:9

F7G5K6              	100.00%		L0PCN5              	100.00%
F7IC58              	31.55%		L0P7B6              	92.67%
F7HVT0              	20.21%		
F7GQU5              	12.78%		
F7IHW8              	10.04%		
F6WCB6              	7.69%		
F7I5C9              	5.87%		
Bootstrap support for F7G5K6 as seed ortholog is 61%.
Alternative seed ortholog is F7H6F9 (14 bits away from this cluster)
Bootstrap support for L0PCN5 as seed ortholog is 60%.
Alternative seed ortholog is L0PGT4 (9 bits away from this cluster)

Group of orthologs #760. Best score 204 bits
Score difference with first non-orthologous sequence - C.jacchus:204 P.jiroveci:204

F7DWL8              	100.00%		L0PBN7              	100.00%
F7IQ32              	12.10%		
Bootstrap support for F7DWL8 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #761. Best score 203 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:104

F7HM77              	100.00%		L0P7B1              	100.00%
F6SPE3              	89.19%		
Bootstrap support for F7HM77 as seed ortholog is 100%.
Bootstrap support for L0P7B1 as seed ortholog is 100%.

Group of orthologs #762. Best score 203 bits
Score difference with first non-orthologous sequence - C.jacchus:162 P.jiroveci:203

F7B597              	100.00%		L0P9D6              	100.00%
Bootstrap support for F7B597 as seed ortholog is 99%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #763. Best score 203 bits
Score difference with first non-orthologous sequence - C.jacchus:77 P.jiroveci:74

F7HVU8              	100.00%		L0PAA8              	100.00%
Bootstrap support for F7HVU8 as seed ortholog is 99%.
Bootstrap support for L0PAA8 as seed ortholog is 99%.

Group of orthologs #764. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:41 P.jiroveci:201

F7DFR1              	100.00%		L0PC02              	100.00%
F7HZD0              	53.14%		
F6QZD6              	47.11%		
F7IAW8              	24.11%		
Bootstrap support for F7DFR1 as seed ortholog is 95%.
Bootstrap support for L0PC02 as seed ortholog is 100%.

Group of orthologs #765. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:201 P.jiroveci:98

F6XMQ0              	100.00%		L0PFD8              	100.00%
F7CMU7              	28.64%		
F7IEH2              	10.99%		
Bootstrap support for F6XMQ0 as seed ortholog is 100%.
Bootstrap support for L0PFD8 as seed ortholog is 99%.

Group of orthologs #766. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:201 P.jiroveci:201

F6YXC8              	100.00%		L0PDJ4              	100.00%
Bootstrap support for F6YXC8 as seed ortholog is 100%.
Bootstrap support for L0PDJ4 as seed ortholog is 100%.

Group of orthologs #767. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:145 P.jiroveci:201

F7H6A7              	100.00%		L0PDS6              	100.00%
Bootstrap support for F7H6A7 as seed ortholog is 99%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #768. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:31 P.jiroveci:102

F7HZ73              	100.00%		L0PDN2              	100.00%
Bootstrap support for F7HZ73 as seed ortholog is 78%.
Bootstrap support for L0PDN2 as seed ortholog is 99%.

Group of orthologs #769. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:86 P.jiroveci:201

F7I7X2              	100.00%		L0PD35              	100.00%
Bootstrap support for F7I7X2 as seed ortholog is 99%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #770. Best score 200 bits
Score difference with first non-orthologous sequence - C.jacchus:200 P.jiroveci:200

F6Z3N2              	100.00%		L0PBD4              	100.00%
Bootstrap support for F6Z3N2 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #771. Best score 200 bits
Score difference with first non-orthologous sequence - C.jacchus:200 P.jiroveci:200

F6YPZ0              	100.00%		L0PCH6              	100.00%
Bootstrap support for F6YPZ0 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #772. Best score 200 bits
Score difference with first non-orthologous sequence - C.jacchus:200 P.jiroveci:200

F7IS62              	100.00%		L0P7L9              	100.00%
Bootstrap support for F7IS62 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #773. Best score 199 bits
Score difference with first non-orthologous sequence - C.jacchus:51 P.jiroveci:144

F7H6E0              	100.00%		L0P8M4              	100.00%
F7BFK7              	23.63%		
F6W8X9              	8.86%		
F7CJ87              	8.02%		
Bootstrap support for F7H6E0 as seed ortholog is 98%.
Bootstrap support for L0P8M4 as seed ortholog is 100%.

Group of orthologs #774. Best score 199 bits
Score difference with first non-orthologous sequence - C.jacchus:199 P.jiroveci:199

F6VX89              	100.00%		L0PAC1              	100.00%
F6SG20              	29.65%		
F7HY03              	27.33%		
Bootstrap support for F6VX89 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #775. Best score 199 bits
Score difference with first non-orthologous sequence - C.jacchus:199 P.jiroveci:199

F7CSU9              	100.00%		L0PDJ6              	100.00%
F6V6B9              	29.84%		
F7CFT4              	12.70%		
Bootstrap support for F7CSU9 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #776. Best score 199 bits
Score difference with first non-orthologous sequence - C.jacchus:199 P.jiroveci:199

F7EY42              	100.00%		L0P9I0              	100.00%
F7AQF5              	98.37%		
Bootstrap support for F7EY42 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #777. Best score 198 bits
Score difference with first non-orthologous sequence - C.jacchus:85 P.jiroveci:148

F6VZN0              	100.00%		L0PAF0              	100.00%
F7HZU5              	27.78%		
Bootstrap support for F6VZN0 as seed ortholog is 98%.
Bootstrap support for L0PAF0 as seed ortholog is 99%.

Group of orthologs #778. Best score 198 bits
Score difference with first non-orthologous sequence - C.jacchus:198 P.jiroveci:198

F6THQ5              	100.00%		L0PHT7              	100.00%
F7B2R3              	11.83%		
Bootstrap support for F6THQ5 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #779. Best score 198 bits
Score difference with first non-orthologous sequence - C.jacchus:142 P.jiroveci:198

F7GP32              	100.00%		L0PBL5              	100.00%
F7IHM5              	11.88%		
Bootstrap support for F7GP32 as seed ortholog is 99%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #780. Best score 198 bits
Score difference with first non-orthologous sequence - C.jacchus:198 P.jiroveci:198

F6YN11              	100.00%		L0PAR5              	100.00%
Bootstrap support for F6YN11 as seed ortholog is 100%.
Bootstrap support for L0PAR5 as seed ortholog is 100%.

Group of orthologs #781. Best score 197 bits
Score difference with first non-orthologous sequence - C.jacchus:197 P.jiroveci:197

F7GGE1              	100.00%		L0P8Z2              	100.00%
F7FF70              	96.71%		
F7FGX4              	81.37%		
F7HUJ6              	45.75%		
Bootstrap support for F7GGE1 as seed ortholog is 100%.
Bootstrap support for L0P8Z2 as seed ortholog is 100%.

Group of orthologs #782. Best score 197 bits
Score difference with first non-orthologous sequence - C.jacchus:68 P.jiroveci:135

F6QQX2              	100.00%		L0P8I7              	100.00%
F7GKL9              	60.83%		
Bootstrap support for F6QQX2 as seed ortholog is 99%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #783. Best score 197 bits
Score difference with first non-orthologous sequence - C.jacchus:68 P.jiroveci:197

F7HFJ8              	100.00%		L0PE53              	100.00%
F7IDR3              	34.18%		
Bootstrap support for F7HFJ8 as seed ortholog is 62%.
Alternative seed ortholog is F7DYJ7 (68 bits away from this cluster)
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #784. Best score 197 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:197

F6RTE8              	100.00%		L0PA51              	100.00%
Bootstrap support for F6RTE8 as seed ortholog is 99%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #785. Best score 196 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:137

F6Q862              	100.00%		L0PCC3              	100.00%
F6S019              	75.97%		
F7EPS6              	75.97%		
F7I2J2              	69.96%		
F6WTR9              	66.52%		
Bootstrap support for F6Q862 as seed ortholog is 99%.
Bootstrap support for L0PCC3 as seed ortholog is 100%.

Group of orthologs #786. Best score 195 bits
Score difference with first non-orthologous sequence - C.jacchus:195 P.jiroveci:195

F7I3I1              	100.00%		L0P9Z4              	100.00%
F7H8H5              	48.74%		
Bootstrap support for F7I3I1 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #787. Best score 195 bits
Score difference with first non-orthologous sequence - C.jacchus:195 P.jiroveci:195

F7G9J0              	100.00%		L0PCK9              	100.00%
Bootstrap support for F7G9J0 as seed ortholog is 100%.
Bootstrap support for L0PCK9 as seed ortholog is 100%.

Group of orthologs #788. Best score 195 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:195

F7I7E4              	100.00%		L0P9Z5              	100.00%
Bootstrap support for F7I7E4 as seed ortholog is 98%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #789. Best score 194 bits
Score difference with first non-orthologous sequence - C.jacchus:68 P.jiroveci:95

F7INS8              	100.00%		L0PAY4              	100.00%
F7INI1              	96.72%		
F7IE02              	96.72%		
F7FGM6              	95.08%		
F7ICZ0              	93.44%		
F7EIE8              	88.52%		
F7FGJ6              	86.89%		
F7A0P6              	27.87%		
Bootstrap support for F7INS8 as seed ortholog is 99%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #790. Best score 194 bits
Score difference with first non-orthologous sequence - C.jacchus:140 P.jiroveci:194

F7I7J1              	100.00%		L0P919              	100.00%
Bootstrap support for F7I7J1 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #791. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:193

F7EY23              	100.00%		L0P9Y2              	100.00%
F6ZJH9              	60.28%		
F7HGH7              	54.67%		
F7HTY1              	54.21%		
F6W4L0              	44.86%		
F7HAX9              	42.52%		
F7I5V0              	5.61%		
Bootstrap support for F7EY23 as seed ortholog is 99%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #792. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:193 P.jiroveci:193

F7G060              	100.00%		L0PB94              	100.00%
F6QUS7              	39.17%		
F6R1P9              	33.50%		
Bootstrap support for F7G060 as seed ortholog is 100%.
Bootstrap support for L0PB94 as seed ortholog is 100%.

Group of orthologs #793. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:193

F7F437              	100.00%		L0PAJ6              	100.00%
Bootstrap support for F7F437 as seed ortholog is 99%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #794. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:193

F7DZ69              	100.00%		L0PF75              	100.00%
Bootstrap support for F7DZ69 as seed ortholog is 99%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #795. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:193 P.jiroveci:193

F7FQQ8              	100.00%		L0PAM3              	100.00%
Bootstrap support for F7FQQ8 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #796. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:193 P.jiroveci:193

F7HS53              	100.00%		L0PG10              	100.00%
Bootstrap support for F7HS53 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 100%.

Group of orthologs #797. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:193 P.jiroveci:193

F7HWG5              	100.00%		L0PFH3              	100.00%
Bootstrap support for F7HWG5 as seed ortholog is 100%.
Bootstrap support for L0PFH3 as seed ortholog is 100%.

Group of orthologs #798. Best score 193 bits
Score difference with first non-orthologous sequence - C.jacchus:193 P.jiroveci:193

F7IBG6              	100.00%		L0PFW4              	100.00%
Bootstrap support for F7IBG6 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #799. Best score 192 bits
Score difference with first non-orthologous sequence - C.jacchus:45 P.jiroveci:138

F6UPD4              	100.00%		L0PIS9              	100.00%
F7HU72              	72.20%		
F7GPY7              	38.57%		
F7F4K3              	33.63%		
F7GSP9              	17.04%		
F7I6T1              	12.56%		
F6WFR3              	8.07%		
F7F8T8              	7.62%		
F7I8G8              	7.17%		
Bootstrap support for F6UPD4 as seed ortholog is 93%.
Bootstrap support for L0PIS9 as seed ortholog is 100%.

Group of orthologs #800. Best score 192 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:192

F6TI38              	100.00%		L0PEN4              	100.00%
Bootstrap support for F6TI38 as seed ortholog is 91%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #801. Best score 191 bits
Score difference with first non-orthologous sequence - C.jacchus:191 P.jiroveci:191

F7ICJ0              	100.00%		L0PFV3              	100.00%
F7IGT4              	28.26%		
F7GRW8              	25.80%		
Bootstrap support for F7ICJ0 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #802. Best score 191 bits
Score difference with first non-orthologous sequence - C.jacchus:191 P.jiroveci:191

F7BVV8              	100.00%		L0PBL8              	100.00%
                    	       		L0PDU3              	68.31%
Bootstrap support for F7BVV8 as seed ortholog is 100%.
Bootstrap support for L0PBL8 as seed ortholog is 100%.

Group of orthologs #803. Best score 191 bits
Score difference with first non-orthologous sequence - C.jacchus:191 P.jiroveci:191

F6QB78              	100.00%		L0PG84              	100.00%
Bootstrap support for F6QB78 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #804. Best score 191 bits
Score difference with first non-orthologous sequence - C.jacchus:191 P.jiroveci:191

F7ILD6              	100.00%		L0PFC3              	100.00%
Bootstrap support for F7ILD6 as seed ortholog is 100%.
Bootstrap support for L0PFC3 as seed ortholog is 100%.

Group of orthologs #805. Best score 190 bits
Score difference with first non-orthologous sequence - C.jacchus:190 P.jiroveci:190

F7HGG5              	100.00%		L0PCH4              	100.00%
Bootstrap support for F7HGG5 as seed ortholog is 100%.
Bootstrap support for L0PCH4 as seed ortholog is 100%.

Group of orthologs #806. Best score 189 bits
Score difference with first non-orthologous sequence - C.jacchus:189 P.jiroveci:189

F6SEG9              	100.00%		L0PBL3              	100.00%
F7IDS6              	40.20%		
F7FHI6              	33.86%		
Bootstrap support for F6SEG9 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #807. Best score 189 bits
Score difference with first non-orthologous sequence - C.jacchus:110 P.jiroveci:146

F7I414              	100.00%		L0PD33              	100.00%
F6S6F4              	47.49%		
Bootstrap support for F7I414 as seed ortholog is 99%.
Bootstrap support for L0PD33 as seed ortholog is 100%.

Group of orthologs #808. Best score 188 bits
Score difference with first non-orthologous sequence - C.jacchus:188 P.jiroveci:188

F7ERF8              	100.00%		L0PFK7              	100.00%
F7DUD0              	42.60%		
F7FKC8              	39.71%		
F7EFE6              	25.10%		
Bootstrap support for F7ERF8 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #809. Best score 188 bits
Score difference with first non-orthologous sequence - C.jacchus:188 P.jiroveci:188

F6XP45              	100.00%		L0P6S2              	100.00%
Bootstrap support for F6XP45 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #810. Best score 187 bits
Score difference with first non-orthologous sequence - C.jacchus:187 P.jiroveci:187

F7HPP7              	100.00%		L0PBM3              	100.00%
Bootstrap support for F7HPP7 as seed ortholog is 100%.
Bootstrap support for L0PBM3 as seed ortholog is 100%.

Group of orthologs #811. Best score 187 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:187

F7IJD9              	100.00%		L0PEH9              	100.00%
Bootstrap support for F7IJD9 as seed ortholog is 99%.
Bootstrap support for L0PEH9 as seed ortholog is 100%.

Group of orthologs #812. Best score 187 bits
Score difference with first non-orthologous sequence - C.jacchus:187 P.jiroveci:187

F7IFM5              	100.00%		L0PGR5              	100.00%
Bootstrap support for F7IFM5 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #813. Best score 186 bits
Score difference with first non-orthologous sequence - C.jacchus:186 P.jiroveci:186

F7E372              	100.00%		L0PH33              	100.00%
F7HL79              	68.36%		
F6R7E0              	25.31%		
F7GXT3              	24.00%		
F7H5P2              	23.49%		
F6V796              	21.38%		
F7H0S3              	17.96%		
F7HZX8              	17.75%		
Bootstrap support for F7E372 as seed ortholog is 100%.
Bootstrap support for L0PH33 as seed ortholog is 100%.

Group of orthologs #814. Best score 186 bits
Score difference with first non-orthologous sequence - C.jacchus:186 P.jiroveci:186

F7FXJ4              	100.00%		L0PEK7              	100.00%
Bootstrap support for F7FXJ4 as seed ortholog is 100%.
Bootstrap support for L0PEK7 as seed ortholog is 100%.

Group of orthologs #815. Best score 185 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:185

F7FUX3              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.02%
Bootstrap support for F7FUX3 as seed ortholog is 99%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #816. Best score 185 bits
Score difference with first non-orthologous sequence - C.jacchus:185 P.jiroveci:185

F7HJR7              	100.00%		L0PE05              	100.00%
Bootstrap support for F7HJR7 as seed ortholog is 100%.
Bootstrap support for L0PE05 as seed ortholog is 100%.

Group of orthologs #817. Best score 185 bits
Score difference with first non-orthologous sequence - C.jacchus:112 P.jiroveci:185

F7IBD6              	100.00%		L0PE09              	100.00%
Bootstrap support for F7IBD6 as seed ortholog is 99%.
Bootstrap support for L0PE09 as seed ortholog is 100%.

Group of orthologs #818. Best score 185 bits
Score difference with first non-orthologous sequence - C.jacchus:185 P.jiroveci:185

F7IG24              	100.00%		L0PGJ8              	100.00%
Bootstrap support for F7IG24 as seed ortholog is 100%.
Bootstrap support for L0PGJ8 as seed ortholog is 100%.

Group of orthologs #819. Best score 184 bits
Score difference with first non-orthologous sequence - C.jacchus:63 P.jiroveci:184

F6Z8Q1              	100.00%		L0PAP9              	100.00%
F7I3N8              	39.09%		
F7HVP4              	22.73%		
F7GUH4              	9.09%		
Bootstrap support for F6Z8Q1 as seed ortholog is 99%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #820. Best score 184 bits
Score difference with first non-orthologous sequence - C.jacchus:184 P.jiroveci:184

F6S302              	100.00%		L0PBB0              	100.00%
F7G179              	11.19%		
Bootstrap support for F6S302 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 100%.

Group of orthologs #821. Best score 184 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:184

F7F3Y4              	100.00%		L0PDE4              	100.00%
H9KWP4              	61.74%		
Bootstrap support for F7F3Y4 as seed ortholog is 99%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #822. Best score 184 bits
Score difference with first non-orthologous sequence - C.jacchus:184 P.jiroveci:184

F7I394              	100.00%		L0PD76              	100.00%
Bootstrap support for F7I394 as seed ortholog is 100%.
Bootstrap support for L0PD76 as seed ortholog is 100%.

Group of orthologs #823. Best score 183 bits
Score difference with first non-orthologous sequence - C.jacchus:183 P.jiroveci:183

F7BUU4              	100.00%		L0PCV5              	100.00%
F7IGW2              	44.92%		
Bootstrap support for F7BUU4 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #824. Best score 183 bits
Score difference with first non-orthologous sequence - C.jacchus:52 P.jiroveci:95

F7IA43              	100.00%		L0PAS2              	100.00%
F7E5R7              	85.16%		
Bootstrap support for F7IA43 as seed ortholog is 98%.
Bootstrap support for L0PAS2 as seed ortholog is 99%.

Group of orthologs #825. Best score 183 bits
Score difference with first non-orthologous sequence - C.jacchus:183 P.jiroveci:183

F6UJS5              	100.00%		L0PC68              	100.00%
Bootstrap support for F6UJS5 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #826. Best score 183 bits
Score difference with first non-orthologous sequence - C.jacchus:183 P.jiroveci:183

F7HXA8              	100.00%		L0PC80              	100.00%
Bootstrap support for F7HXA8 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #827. Best score 183 bits
Score difference with first non-orthologous sequence - C.jacchus:183 P.jiroveci:183

F7HUD4              	100.00%		L0PEA1              	100.00%
Bootstrap support for F7HUD4 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 100%.

Group of orthologs #828. Best score 182 bits
Score difference with first non-orthologous sequence - C.jacchus:182 P.jiroveci:182

F7I7D7              	100.00%		L0PC96              	100.00%
F7DDV9              	89.79%		
H9KWM0              	60.43%		
F7HWN2              	33.62%		
F7A9B4              	21.70%		
Bootstrap support for F7I7D7 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #829. Best score 182 bits
Score difference with first non-orthologous sequence - C.jacchus:182 P.jiroveci:182

F6YDA4              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	57.60%
Bootstrap support for F6YDA4 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #830. Best score 182 bits
Score difference with first non-orthologous sequence - C.jacchus:182 P.jiroveci:182

F6ZSH6              	100.00%		L0P7L7              	100.00%
Bootstrap support for F6ZSH6 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #831. Best score 182 bits
Score difference with first non-orthologous sequence - C.jacchus:51 P.jiroveci:182

F7EF90              	100.00%		L0PBS7              	100.00%
Bootstrap support for F7EF90 as seed ortholog is 87%.
Bootstrap support for L0PBS7 as seed ortholog is 100%.

Group of orthologs #832. Best score 182 bits
Score difference with first non-orthologous sequence - C.jacchus:182 P.jiroveci:182

F7GQG6              	100.00%		L0P9M6              	100.00%
Bootstrap support for F7GQG6 as seed ortholog is 100%.
Bootstrap support for L0P9M6 as seed ortholog is 100%.

Group of orthologs #833. Best score 181 bits
Score difference with first non-orthologous sequence - C.jacchus:181 P.jiroveci:181

F7I4L9              	100.00%		L0P8C9              	100.00%
F7I753              	71.57%		
F6PGU3              	68.53%		
Bootstrap support for F7I4L9 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #834. Best score 181 bits
Score difference with first non-orthologous sequence - C.jacchus:181 P.jiroveci:181

F6YKG3              	100.00%		L0PB62              	100.00%
Bootstrap support for F6YKG3 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #835. Best score 181 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:181

F7HYR3              	100.00%		L0PBU7              	100.00%
Bootstrap support for F7HYR3 as seed ortholog is 100%.
Bootstrap support for L0PBU7 as seed ortholog is 100%.

Group of orthologs #836. Best score 180 bits
Score difference with first non-orthologous sequence - C.jacchus:180 P.jiroveci:180

F6XF21              	100.00%		L0PC06              	100.00%
Bootstrap support for F6XF21 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #837. Best score 180 bits
Score difference with first non-orthologous sequence - C.jacchus:180 P.jiroveci:180

F7ECN1              	100.00%		L0PBE8              	100.00%
Bootstrap support for F7ECN1 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #838. Best score 180 bits
Score difference with first non-orthologous sequence - C.jacchus:104 P.jiroveci:180

F7GPT9              	100.00%		L0PB84              	100.00%
Bootstrap support for F7GPT9 as seed ortholog is 99%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #839. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 P.jiroveci:179

F6PQH9              	100.00%		L0PE97              	100.00%
F7IDF7              	79.47%		
Bootstrap support for F6PQH9 as seed ortholog is 100%.
Bootstrap support for L0PE97 as seed ortholog is 100%.

Group of orthologs #840. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 P.jiroveci:179

F7BQM1              	100.00%		L0PGW6              	100.00%
F7GQR3              	26.22%		
Bootstrap support for F7BQM1 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #841. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 P.jiroveci:179

F7GTQ4              	100.00%		L0PBJ0              	100.00%
F6VAN6              	89.95%		
Bootstrap support for F7GTQ4 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #842. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 P.jiroveci:179

F7IMP1              	100.00%		L0PCF8              	100.00%
F7GTI1              	63.09%		
Bootstrap support for F7IMP1 as seed ortholog is 100%.
Bootstrap support for L0PCF8 as seed ortholog is 100%.

Group of orthologs #843. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 P.jiroveci:179

F7IS24              	100.00%		L0PAR2              	100.00%
F7IFL9              	59.85%		
Bootstrap support for F7IS24 as seed ortholog is 100%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #844. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:85 P.jiroveci:179

F7E793              	100.00%		L0PE03              	100.00%
Bootstrap support for F7E793 as seed ortholog is 98%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #845. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:113 P.jiroveci:179

Q28333              	100.00%		L0P838              	100.00%
Bootstrap support for Q28333 as seed ortholog is 99%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #846. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 P.jiroveci:179

F7IJI3              	100.00%		L0PFD7              	100.00%
Bootstrap support for F7IJI3 as seed ortholog is 100%.
Bootstrap support for L0PFD7 as seed ortholog is 100%.

Group of orthologs #847. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:178

F6WC44              	100.00%		L0PE85              	100.00%
F6YJX0              	74.36%		
F7GSM1              	38.46%		
Bootstrap support for F6WC44 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #848. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:178

F6UMM6              	100.00%		L0PFP1              	100.00%
                    	       		L0PC71              	74.91%
Bootstrap support for F6UMM6 as seed ortholog is 100%.
Bootstrap support for L0PFP1 as seed ortholog is 100%.

Group of orthologs #849. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:178

F6XGV2              	100.00%		L0PBX9              	100.00%
Bootstrap support for F6XGV2 as seed ortholog is 88%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #850. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:178

F6XI06              	100.00%		L0PDB7              	100.00%
Bootstrap support for F6XI06 as seed ortholog is 99%.
Bootstrap support for L0PDB7 as seed ortholog is 100%.

Group of orthologs #851. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:109 P.jiroveci:100

F7HG44              	100.00%		L0P7L3              	100.00%
Bootstrap support for F7HG44 as seed ortholog is 99%.
Bootstrap support for L0P7L3 as seed ortholog is 99%.

Group of orthologs #852. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:178 P.jiroveci:178

F7HX40              	100.00%		L0PGX9              	100.00%
Bootstrap support for F7HX40 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 100%.

Group of orthologs #853. Best score 177 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:177

F6R171              	100.00%		L0PB17              	100.00%
F7HHU8              	7.63%		
Bootstrap support for F6R171 as seed ortholog is 99%.
Bootstrap support for L0PB17 as seed ortholog is 100%.

Group of orthologs #854. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:176 P.jiroveci:176

H9KXQ9              	100.00%		L0PB81              	100.00%
F6S6U2              	93.48%		
F7HZR2              	67.39%		
F7GJ84              	42.75%		
Bootstrap support for H9KXQ9 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #855. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:176 P.jiroveci:176

F7D9C2              	100.00%		L0PDW5              	100.00%
H9KWM3              	100.00%		
F7A664              	62.18%		
Bootstrap support for F7D9C2 as seed ortholog is 100%.
Bootstrap support for H9KWM3 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #856. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:131

F6XVW4              	100.00%		L0PDG6              	100.00%
Bootstrap support for F6XVW4 as seed ortholog is 93%.
Bootstrap support for L0PDG6 as seed ortholog is 99%.

Group of orthologs #857. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:176

F6ZL48              	100.00%		L0PC81              	100.00%
Bootstrap support for F6ZL48 as seed ortholog is 95%.
Bootstrap support for L0PC81 as seed ortholog is 100%.

Group of orthologs #858. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:176 P.jiroveci:176

F7CPY9              	100.00%		L0P8D5              	100.00%
Bootstrap support for F7CPY9 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #859. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:21 P.jiroveci:176

F7CPQ9              	100.00%		L0PAV2              	100.00%
Bootstrap support for F7CPQ9 as seed ortholog is 74%.
Alternative seed ortholog is F7HMU3 (21 bits away from this cluster)
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #860. Best score 176 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:176

F7DID4              	100.00%		L0PBU8              	100.00%
Bootstrap support for F7DID4 as seed ortholog is 98%.
Bootstrap support for L0PBU8 as seed ortholog is 100%.

Group of orthologs #861. Best score 175 bits
Score difference with first non-orthologous sequence - C.jacchus:175 P.jiroveci:175

F7FJX7              	100.00%		L0P746              	100.00%
Bootstrap support for F7FJX7 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #862. Best score 175 bits
Score difference with first non-orthologous sequence - C.jacchus:175 P.jiroveci:175

F7H7K3              	100.00%		L0PA48              	100.00%
Bootstrap support for F7H7K3 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #863. Best score 175 bits
Score difference with first non-orthologous sequence - C.jacchus:15 P.jiroveci:175

F7I546              	100.00%		L0PFZ5              	100.00%
Bootstrap support for F7I546 as seed ortholog is 66%.
Alternative seed ortholog is F6SDR6 (15 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #864. Best score 174 bits
Score difference with first non-orthologous sequence - C.jacchus:52 P.jiroveci:174

F6TLV7              	100.00%		L0PBL9              	100.00%
Bootstrap support for F6TLV7 as seed ortholog is 87%.
Bootstrap support for L0PBL9 as seed ortholog is 100%.

Group of orthologs #865. Best score 174 bits
Score difference with first non-orthologous sequence - C.jacchus:174 P.jiroveci:174

F7BR22              	100.00%		L0P740              	100.00%
Bootstrap support for F7BR22 as seed ortholog is 100%.
Bootstrap support for L0P740 as seed ortholog is 100%.

Group of orthologs #866. Best score 174 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:174

F7HKF5              	100.00%		L0PGZ5              	100.00%
Bootstrap support for F7HKF5 as seed ortholog is 99%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #867. Best score 173 bits
Score difference with first non-orthologous sequence - C.jacchus:173 P.jiroveci:173

F7DKT5              	100.00%		L0PCE0              	100.00%
F6WU67              	25.59%		
Bootstrap support for F7DKT5 as seed ortholog is 100%.
Bootstrap support for L0PCE0 as seed ortholog is 100%.

Group of orthologs #868. Best score 173 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:173

F7B893              	100.00%		L0PC70              	100.00%
Bootstrap support for F7B893 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #869. Best score 173 bits
Score difference with first non-orthologous sequence - C.jacchus:173 P.jiroveci:173

F7IKQ3              	100.00%		L0PAM2              	100.00%
Bootstrap support for F7IKQ3 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #870. Best score 173 bits
Score difference with first non-orthologous sequence - C.jacchus:129 P.jiroveci:173

F7IKW7              	100.00%		L0PFW7              	100.00%
Bootstrap support for F7IKW7 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #871. Best score 172 bits
Score difference with first non-orthologous sequence - C.jacchus:172 P.jiroveci:172

F7I7Y0              	100.00%		L0PGJ6              	100.00%
F6ZK54              	8.22%		
Bootstrap support for F7I7Y0 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #872. Best score 172 bits
Score difference with first non-orthologous sequence - C.jacchus:172 P.jiroveci:172

F6Z0S9              	100.00%		L0PDL5              	100.00%
Bootstrap support for F6Z0S9 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #873. Best score 172 bits
Score difference with first non-orthologous sequence - C.jacchus:172 P.jiroveci:172

F7F6T9              	100.00%		L0PDP9              	100.00%
Bootstrap support for F7F6T9 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #874. Best score 172 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:85

F7IBD3              	100.00%		L0PAQ4              	100.00%
Bootstrap support for F7IBD3 as seed ortholog is 99%.
Bootstrap support for L0PAQ4 as seed ortholog is 99%.

Group of orthologs #875. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:100 P.jiroveci:171

F7DYP3              	100.00%		L0PD97              	100.00%
F6UDY9              	65.61%		
F6RY18              	11.09%		
F7BR54              	9.50%		
Bootstrap support for F7DYP3 as seed ortholog is 99%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #876. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:20 P.jiroveci:85

F7H1V8              	100.00%		L0PGM0              	100.00%
F7FF11              	69.74%		
F7INJ7              	47.18%		
Bootstrap support for F7H1V8 as seed ortholog is 80%.
Bootstrap support for L0PGM0 as seed ortholog is 100%.

Group of orthologs #877. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:171 P.jiroveci:171

F6WK78              	100.00%		L0PBH0              	100.00%
                    	       		L0PGS5              	38.12%
Bootstrap support for F6WK78 as seed ortholog is 100%.
Bootstrap support for L0PBH0 as seed ortholog is 100%.

Group of orthologs #878. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:171 P.jiroveci:126

F7CN40              	100.00%		L0PE37              	100.00%
F7ISA3              	24.17%		
Bootstrap support for F7CN40 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #879. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:171 P.jiroveci:171

F7CQY6              	100.00%		L0PH23              	100.00%
F7GG56              	22.56%		
Bootstrap support for F7CQY6 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #880. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:38 P.jiroveci:171

F7HTE6              	100.00%		L0PCI0              	100.00%
Bootstrap support for F7HTE6 as seed ortholog is 80%.
Bootstrap support for L0PCI0 as seed ortholog is 100%.

Group of orthologs #881. Best score 170 bits
Score difference with first non-orthologous sequence - C.jacchus:170 P.jiroveci:170

F7CZ83              	100.00%		L0PCP5              	100.00%
Bootstrap support for F7CZ83 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #882. Best score 170 bits
Score difference with first non-orthologous sequence - C.jacchus:129 P.jiroveci:170

F7HYK0              	100.00%		L0P701              	100.00%
Bootstrap support for F7HYK0 as seed ortholog is 99%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #883. Best score 170 bits
Score difference with first non-orthologous sequence - C.jacchus:170 P.jiroveci:170

F7I2L0              	100.00%		L0PA27              	100.00%
Bootstrap support for F7I2L0 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #884. Best score 169 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:169

F6SPY4              	100.00%		L0PD40              	100.00%
Bootstrap support for F6SPY4 as seed ortholog is 99%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #885. Best score 169 bits
Score difference with first non-orthologous sequence - C.jacchus:169 P.jiroveci:169

F6VCF6              	100.00%		L0PFL0              	100.00%
Bootstrap support for F6VCF6 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #886. Best score 168 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:168

F7ICS1              	100.00%		L0P9N4              	100.00%
F7CKG3              	75.71%		
H9KYL8              	34.29%		
Bootstrap support for F7ICS1 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #887. Best score 168 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:168

F6PQC3              	100.00%		L0PE43              	100.00%
Bootstrap support for F6PQC3 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #888. Best score 168 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:168

F6UXM5              	100.00%		L0PAG4              	100.00%
Bootstrap support for F6UXM5 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #889. Best score 168 bits
Score difference with first non-orthologous sequence - C.jacchus:168 P.jiroveci:168

F7BQT9              	100.00%		L0PG54              	100.00%
Bootstrap support for F7BQT9 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #890. Best score 168 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:168

F7FK59              	100.00%		L0PEI1              	100.00%
Bootstrap support for F7FK59 as seed ortholog is 99%.
Bootstrap support for L0PEI1 as seed ortholog is 100%.

Group of orthologs #891. Best score 167 bits
Score difference with first non-orthologous sequence - C.jacchus:167 P.jiroveci:167

F7DU09              	100.00%		L0P9W6              	100.00%
F7EAP7              	100.00%		
F7ID35              	100.00%		
F7IQQ3              	97.18%		
F7ID26              	92.96%		
F7FGH5              	90.14%		
F7IIR1              	69.01%		
F7INM0              	58.57%		
F7ITE4              	53.52%		
F7I0G8              	49.30%		
F7GZG3              	22.54%		
F7IGD9              	21.43%		
Bootstrap support for F7DU09 as seed ortholog is 100%.
Bootstrap support for F7EAP7 as seed ortholog is 100%.
Bootstrap support for F7ID35 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 100%.

Group of orthologs #892. Best score 167 bits
Score difference with first non-orthologous sequence - C.jacchus:167 P.jiroveci:167

F7H8T3              	100.00%		L0P8P5              	100.00%
F6Q1E2              	99.51%		
F7G6K3              	95.59%		
F7IBM1              	95.10%		
Bootstrap support for F7H8T3 as seed ortholog is 100%.
Bootstrap support for L0P8P5 as seed ortholog is 100%.

Group of orthologs #893. Best score 167 bits
Score difference with first non-orthologous sequence - C.jacchus:70 P.jiroveci:167

F7DSR4              	100.00%		L0PA07              	100.00%
Bootstrap support for F7DSR4 as seed ortholog is 97%.
Bootstrap support for L0PA07 as seed ortholog is 100%.

Group of orthologs #894. Best score 167 bits
Score difference with first non-orthologous sequence - C.jacchus:167 P.jiroveci:167

F7IKU5              	100.00%		L0PFP7              	100.00%
Bootstrap support for F7IKU5 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #895. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

Q2QLG4              	100.00%		L0PFG0              	100.00%
F6QUE9              	80.43%		
F7GU68              	6.44%		
Bootstrap support for Q2QLG4 as seed ortholog is 100%.
Bootstrap support for L0PFG0 as seed ortholog is 100%.

Group of orthologs #896. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

F6RPJ7              	100.00%		L0PEA9              	100.00%
F7IR92              	36.95%		
Bootstrap support for F6RPJ7 as seed ortholog is 100%.
Bootstrap support for L0PEA9 as seed ortholog is 100%.

Group of orthologs #897. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

F7B8F4              	100.00%		L0PA28              	100.00%
F7ELW4              	33.73%		
Bootstrap support for F7B8F4 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 100%.

Group of orthologs #898. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

F7D8I5              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	90.86%
Bootstrap support for F7D8I5 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #899. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

F6Y4P4              	100.00%		L0P8V3              	100.00%
Bootstrap support for F6Y4P4 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #900. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

F6XC57              	100.00%		L0PGK0              	100.00%
Bootstrap support for F6XC57 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #901. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:166 P.jiroveci:166

F7EGD3              	100.00%		L0PDA4              	100.00%
Bootstrap support for F7EGD3 as seed ortholog is 100%.
Bootstrap support for L0PDA4 as seed ortholog is 100%.

Group of orthologs #902. Best score 166 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:93

F7HJR4              	100.00%		L0P9T6              	100.00%
Bootstrap support for F7HJR4 as seed ortholog is 99%.
Bootstrap support for L0P9T6 as seed ortholog is 99%.

Group of orthologs #903. Best score 165 bits
Score difference with first non-orthologous sequence - C.jacchus:165 P.jiroveci:165

F7CXW2              	100.00%		L0P9Q3              	100.00%
F6UMJ4              	55.86%		
Bootstrap support for F7CXW2 as seed ortholog is 100%.
Bootstrap support for L0P9Q3 as seed ortholog is 100%.

Group of orthologs #904. Best score 164 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:164

F7ILB2              	100.00%		L0PBL1              	100.00%
F7CM44              	85.43%		
F7DQL2              	38.48%		
Bootstrap support for F7ILB2 as seed ortholog is 92%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #905. Best score 164 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:164

F7IMT4              	100.00%		L0PC66              	100.00%
F7DBS0              	35.49%		L0PBN8              	74.55%
Bootstrap support for F7IMT4 as seed ortholog is 99%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #906. Best score 164 bits
Score difference with first non-orthologous sequence - C.jacchus:164 P.jiroveci:164

F7I061              	100.00%		L0PA78              	100.00%
F7ID78              	100.00%		
Bootstrap support for F7I061 as seed ortholog is 100%.
Bootstrap support for F7ID78 as seed ortholog is 100%.
Bootstrap support for L0PA78 as seed ortholog is 100%.

Group of orthologs #907. Best score 164 bits
Score difference with first non-orthologous sequence - C.jacchus:164 P.jiroveci:164

F7HVY0              	100.00%		L0PGF9              	100.00%
F7E9K6              	22.57%		
Bootstrap support for F7HVY0 as seed ortholog is 100%.
Bootstrap support for L0PGF9 as seed ortholog is 100%.

Group of orthologs #908. Best score 163 bits
Score difference with first non-orthologous sequence - C.jacchus:163 P.jiroveci:163

F7B808              	100.00%		L0PFW9              	100.00%
F7E984              	100.00%		
F7FGA0              	86.64%		
F7HA81              	51.03%		
F7I9G0              	42.47%		
Bootstrap support for F7B808 as seed ortholog is 100%.
Bootstrap support for F7E984 as seed ortholog is 100%.
Bootstrap support for L0PFW9 as seed ortholog is 100%.

Group of orthologs #909. Best score 163 bits
Score difference with first non-orthologous sequence - C.jacchus:163 P.jiroveci:163

F7A401              	100.00%		L0P8S1              	100.00%
F6WN86              	72.07%		
F6ZZ78              	47.61%		
F7EAS4              	39.89%		
Bootstrap support for F7A401 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #910. Best score 163 bits
Score difference with first non-orthologous sequence - C.jacchus:163 P.jiroveci:163

F6ZDP6              	100.00%		L0PD11              	100.00%
Bootstrap support for F6ZDP6 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #911. Best score 163 bits
Score difference with first non-orthologous sequence - C.jacchus:163 P.jiroveci:163

F7EV40              	100.00%		L0P8D9              	100.00%
Bootstrap support for F7EV40 as seed ortholog is 100%.
Bootstrap support for L0P8D9 as seed ortholog is 100%.

Group of orthologs #912. Best score 162 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:162

F7EJ37              	100.00%		L0PE13              	100.00%
F7FFM9              	98.64%		
F7I2S8              	97.96%		
F7HF19              	95.24%		
F7FGT5              	93.20%		
F7E8N0              	91.16%		
F7DXE8              	82.99%		
H9KXV6              	76.87%		
F7CUU9              	74.83%		
F7HCE1              	73.47%		
F7DZZ6              	63.27%		
F7HQX4              	61.22%		
F7HJV2              	60.54%		
F7E0S4              	59.86%		
F7HAN0              	58.50%		
F7EYC5              	47.62%		
F7I4U1              	44.90%		
F7IDK4              	44.22%		
F7FFA7              	37.41%		
F6UAH5              	31.29%		
F7CD52              	30.61%		
F7FDX2              	27.89%		
F7HKF2              	27.21%		
Bootstrap support for F7EJ37 as seed ortholog is 100%.
Bootstrap support for L0PE13 as seed ortholog is 100%.

Group of orthologs #913. Best score 162 bits
Score difference with first non-orthologous sequence - C.jacchus:162 P.jiroveci:162

F7GW26              	100.00%		L0P8J4              	100.00%
F7IFK7              	29.87%		
Bootstrap support for F7GW26 as seed ortholog is 100%.
Bootstrap support for L0P8J4 as seed ortholog is 100%.

Group of orthologs #914. Best score 162 bits
Score difference with first non-orthologous sequence - C.jacchus:162 P.jiroveci:162

F7ICI3              	100.00%		L0PFH7              	100.00%
Bootstrap support for F7ICI3 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #915. Best score 161 bits
Score difference with first non-orthologous sequence - C.jacchus:161 P.jiroveci:161

F7DZN1              	100.00%		L0PB30              	100.00%
F7BXJ5              	45.86%		
F6WVS2              	34.83%		
Bootstrap support for F7DZN1 as seed ortholog is 100%.
Bootstrap support for L0PB30 as seed ortholog is 100%.

Group of orthologs #916. Best score 161 bits
Score difference with first non-orthologous sequence - C.jacchus:161 P.jiroveci:161

F7GC12              	100.00%		L0P9X0              	100.00%
F7GYN5              	97.37%		
F7HYT0              	95.26%		
Bootstrap support for F7GC12 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #917. Best score 161 bits
Score difference with first non-orthologous sequence - C.jacchus:161 P.jiroveci:161

F7HWJ0              	100.00%		L0P9G8              	100.00%
                    	       		L0PDI0              	50.82%
Bootstrap support for F7HWJ0 as seed ortholog is 100%.
Bootstrap support for L0P9G8 as seed ortholog is 100%.

Group of orthologs #918. Best score 161 bits
Score difference with first non-orthologous sequence - C.jacchus:161 P.jiroveci:161

F7HKR4              	100.00%		L0P780              	100.00%
Bootstrap support for F7HKR4 as seed ortholog is 100%.
Bootstrap support for L0P780 as seed ortholog is 100%.

Group of orthologs #919. Best score 161 bits
Score difference with first non-orthologous sequence - C.jacchus:161 P.jiroveci:161

F7ID17              	100.00%		L0P7Z9              	100.00%
Bootstrap support for F7ID17 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #920. Best score 161 bits
Score difference with first non-orthologous sequence - C.jacchus:161 P.jiroveci:161

H9KWK8              	100.00%		L0PAB8              	100.00%
Bootstrap support for H9KWK8 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #921. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:104

F6R9P7              	100.00%		L0PE79              	100.00%
F7HUS3              	75.34%		
F7F4D9              	49.33%		
F7DK02              	17.04%		
F7HVS0              	16.14%		
F7IM40              	16.14%		
F6PNM5              	15.70%		
F7IEB0              	11.66%		
F6UKW7              	8.07%		
F6ZK99              	8.07%		
F7IQJ7              	8.07%		
Bootstrap support for F6R9P7 as seed ortholog is 98%.
Bootstrap support for L0PE79 as seed ortholog is 99%.

Group of orthologs #922. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:160

F7ID31              	100.00%		L0PBX0              	100.00%
F7GY43              	54.66%		
F7ITC1              	34.82%		
Bootstrap support for F7ID31 as seed ortholog is 99%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #923. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 P.jiroveci:160

F7DVH3              	100.00%		L0PCA8              	100.00%
F7ILM3              	41.67%		
Bootstrap support for F7DVH3 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #924. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 P.jiroveci:160

F7FY24              	100.00%		L0PFX0              	100.00%
F6QYE5              	64.82%		
Bootstrap support for F7FY24 as seed ortholog is 100%.
Bootstrap support for L0PFX0 as seed ortholog is 100%.

Group of orthologs #925. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 P.jiroveci:160

F7HBF4              	100.00%		L0PFY9              	100.00%
F7I7E7              	100.00%		
Bootstrap support for F7HBF4 as seed ortholog is 100%.
Bootstrap support for F7I7E7 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #926. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 P.jiroveci:160

F7INM3              	100.00%		L0PF39              	100.00%
F7H7A8              	57.65%		
Bootstrap support for F7INM3 as seed ortholog is 100%.
Bootstrap support for L0PF39 as seed ortholog is 100%.

Group of orthologs #927. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:109 P.jiroveci:160

F7I1L8              	100.00%		L0PCP9              	100.00%
Bootstrap support for F7I1L8 as seed ortholog is 99%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #928. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 P.jiroveci:160

F7I9E3              	100.00%		L0PCK2              	100.00%
Bootstrap support for F7I9E3 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #929. Best score 159 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:159

F7INI0              	100.00%		L0PBR7              	100.00%
F7INK0              	95.45%		
F7IAP2              	92.05%		
F7IE05              	92.05%		
F6SJY3              	90.91%		
F7FWZ8              	89.77%		
F6YGS4              	89.77%		
F7FGM2              	52.27%		
Bootstrap support for F7INI0 as seed ortholog is 100%.
Bootstrap support for L0PBR7 as seed ortholog is 100%.

Group of orthologs #930. Best score 159 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:159

H9KXQ3              	100.00%		L0PDH1              	100.00%
F7I424              	91.67%		
F7FEI7              	42.50%		
F7ERW5              	30.00%		
Bootstrap support for H9KXQ3 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #931. Best score 159 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:159

F7HYV6              	100.00%		L0P7D0              	100.00%
F7HZM8              	24.08%		
Bootstrap support for F7HYV6 as seed ortholog is 100%.
Bootstrap support for L0P7D0 as seed ortholog is 100%.

Group of orthologs #932. Best score 159 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:33

B0KW85              	100.00%		L0PCJ0              	100.00%
Bootstrap support for B0KW85 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 71%.
Alternative seed ortholog is L0PGZ6 (33 bits away from this cluster)

Group of orthologs #933. Best score 159 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:159

F7GGP6              	100.00%		L0P872              	100.00%
Bootstrap support for F7GGP6 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #934. Best score 159 bits
Score difference with first non-orthologous sequence - C.jacchus:159 P.jiroveci:159

F7HVC7              	100.00%		L0PEN8              	100.00%
Bootstrap support for F7HVC7 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 100%.

Group of orthologs #935. Best score 158 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:86

F7BT59              	100.00%		L0PEX6              	100.00%
F7HA31              	13.29%		
F6RHT8              	12.72%		
F7FTZ3              	10.98%		
F7HFX7              	7.51%		
Bootstrap support for F7BT59 as seed ortholog is 99%.
Bootstrap support for L0PEX6 as seed ortholog is 99%.

Group of orthologs #936. Best score 158 bits
Score difference with first non-orthologous sequence - C.jacchus:158 P.jiroveci:158

F7AXG4              	100.00%		L0P8H6              	100.00%
F7HDT7              	54.66%		
F7HDI1              	49.07%		
F6RCX6              	43.48%		
Bootstrap support for F7AXG4 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #937. Best score 158 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:99

F7A9G7              	100.00%		L0PBF9              	100.00%
Bootstrap support for F7A9G7 as seed ortholog is 98%.
Bootstrap support for L0PBF9 as seed ortholog is 99%.

Group of orthologs #938. Best score 158 bits
Score difference with first non-orthologous sequence - C.jacchus:158 P.jiroveci:158

F7I3A2              	100.00%		L0P8Y0              	100.00%
Bootstrap support for F7I3A2 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #939. Best score 157 bits
Score difference with first non-orthologous sequence - C.jacchus:157 P.jiroveci:157

F6WQV8              	100.00%		L0PBI9              	100.00%
F7FTA6              	97.30%		
F7FEK9              	85.14%		
F7G5Z0              	81.08%		
F7HQ69              	75.68%		
F7HYY9              	36.49%		
Bootstrap support for F6WQV8 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #940. Best score 157 bits
Score difference with first non-orthologous sequence - C.jacchus:157 P.jiroveci:157

F6XG88              	100.00%		L0P9G6              	100.00%
Bootstrap support for F6XG88 as seed ortholog is 100%.
Bootstrap support for L0P9G6 as seed ortholog is 100%.

Group of orthologs #941. Best score 157 bits
Score difference with first non-orthologous sequence - C.jacchus:157 P.jiroveci:157

F7FXN9              	100.00%		L0P7U2              	100.00%
Bootstrap support for F7FXN9 as seed ortholog is 100%.
Bootstrap support for L0P7U2 as seed ortholog is 100%.

Group of orthologs #942. Best score 157 bits
Score difference with first non-orthologous sequence - C.jacchus:157 P.jiroveci:157

F7HWF2              	100.00%		L0PE02              	100.00%
Bootstrap support for F7HWF2 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #943. Best score 156 bits
Score difference with first non-orthologous sequence - C.jacchus:156 P.jiroveci:156

F7CCM6              	100.00%		L0PI55              	100.00%
                    	       		L0P840              	83.53%
Bootstrap support for F7CCM6 as seed ortholog is 100%.
Bootstrap support for L0PI55 as seed ortholog is 100%.

Group of orthologs #944. Best score 156 bits
Score difference with first non-orthologous sequence - C.jacchus:156 P.jiroveci:156

F6W477              	100.00%		L0PDV9              	100.00%
Bootstrap support for F6W477 as seed ortholog is 100%.
Bootstrap support for L0PDV9 as seed ortholog is 100%.

Group of orthologs #945. Best score 156 bits
Score difference with first non-orthologous sequence - C.jacchus:156 P.jiroveci:156

F7E7J6              	100.00%		L0P8J7              	100.00%
Bootstrap support for F7E7J6 as seed ortholog is 100%.
Bootstrap support for L0P8J7 as seed ortholog is 100%.

Group of orthologs #946. Best score 155 bits
Score difference with first non-orthologous sequence - C.jacchus:155 P.jiroveci:155

F7E9A9              	100.00%		L0PD01              	100.00%
F7IPM5              	95.00%		L0PF42              	100.00%
Bootstrap support for F7E9A9 as seed ortholog is 100%.
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #947. Best score 155 bits
Score difference with first non-orthologous sequence - C.jacchus:84 P.jiroveci:79

F7AAQ0              	100.00%		L0PFK9              	100.00%
F6X484              	15.65%		
Bootstrap support for F7AAQ0 as seed ortholog is 98%.
Bootstrap support for L0PFK9 as seed ortholog is 98%.

Group of orthologs #948. Best score 155 bits
Score difference with first non-orthologous sequence - C.jacchus:155 P.jiroveci:155

F6VQ17              	100.00%		L0PFX5              	100.00%
Bootstrap support for F6VQ17 as seed ortholog is 100%.
Bootstrap support for L0PFX5 as seed ortholog is 100%.

Group of orthologs #949. Best score 155 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:155

F7GN92              	100.00%		L0PDN5              	100.00%
Bootstrap support for F7GN92 as seed ortholog is 99%.
Bootstrap support for L0PDN5 as seed ortholog is 100%.

Group of orthologs #950. Best score 155 bits
Score difference with first non-orthologous sequence - C.jacchus:155 P.jiroveci:155

F7IDT6              	100.00%		L0P852              	100.00%
Bootstrap support for F7IDT6 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #951. Best score 154 bits
Score difference with first non-orthologous sequence - C.jacchus:154 P.jiroveci:154

F6UTL1              	100.00%		L0P8G7              	100.00%
F7HXF2              	86.65%		
Bootstrap support for F6UTL1 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #952. Best score 154 bits
Score difference with first non-orthologous sequence - C.jacchus:154 P.jiroveci:154

F6TK90              	100.00%		L0PFL1              	100.00%
Bootstrap support for F6TK90 as seed ortholog is 100%.
Bootstrap support for L0PFL1 as seed ortholog is 100%.

Group of orthologs #953. Best score 154 bits
Score difference with first non-orthologous sequence - C.jacchus:154 P.jiroveci:154

F7IF92              	100.00%		L0PFQ7              	100.00%
Bootstrap support for F7IF92 as seed ortholog is 100%.
Bootstrap support for L0PFQ7 as seed ortholog is 100%.

Group of orthologs #954. Best score 154 bits
Score difference with first non-orthologous sequence - C.jacchus:154 P.jiroveci:154

F7ITB5              	100.00%		L0PF65              	100.00%
Bootstrap support for F7ITB5 as seed ortholog is 100%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #955. Best score 153 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:94

F6RKX7              	100.00%		L0PDE1              	100.00%
F7DPI7              	5.10%		
Bootstrap support for F6RKX7 as seed ortholog is 97%.
Bootstrap support for L0PDE1 as seed ortholog is 99%.

Group of orthologs #956. Best score 153 bits
Score difference with first non-orthologous sequence - C.jacchus:13 P.jiroveci:68

F6SUZ3              	100.00%		L0PGT3              	100.00%
F6YM94              	5.66%		
Bootstrap support for F6SUZ3 as seed ortholog is 68%.
Alternative seed ortholog is F6VEE2 (13 bits away from this cluster)
Bootstrap support for L0PGT3 as seed ortholog is 99%.

Group of orthologs #957. Best score 153 bits
Score difference with first non-orthologous sequence - C.jacchus:83 P.jiroveci:153

F6ZGY2              	100.00%		L0PDX9              	100.00%
Bootstrap support for F6ZGY2 as seed ortholog is 97%.
Bootstrap support for L0PDX9 as seed ortholog is 100%.

Group of orthologs #958. Best score 153 bits
Score difference with first non-orthologous sequence - C.jacchus:55 P.jiroveci:153

F7A561              	100.00%		L0PF33              	100.00%
Bootstrap support for F7A561 as seed ortholog is 99%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #959. Best score 152 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:152

F6QSH8              	100.00%		L0PEG0              	100.00%
F7IQQ9              	93.44%		
F7IBL0              	92.62%		
F7E8S4              	90.98%		
F7I324              	90.16%		
F7GPK3              	90.16%		
F7I993              	89.34%		
F7F1U8              	87.70%		
F7FV34              	87.70%		
F7HA71              	84.43%		
F7HF10              	82.79%		
F7IGI5              	80.33%		
F7HV45              	79.51%		
F7I4U8              	77.87%		
F7AX80              	77.05%		
F7HVE8              	74.59%		
F7AXY7              	73.77%		
F7I6Z5              	56.56%		
F7G0U5              	46.72%		
F7HXI4              	44.26%		
F7A535              	40.98%		
F7GP39              	40.16%		
F7GHT9              	33.61%		
F6UEB7              	32.79%		
F6PK88              	20.49%		
Bootstrap support for F6QSH8 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #960. Best score 152 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:152

F6R067              	100.00%		L0PDR9              	100.00%
                    	       		L0P8I3              	72.22%
Bootstrap support for F6R067 as seed ortholog is 100%.
Bootstrap support for L0PDR9 as seed ortholog is 100%.

Group of orthologs #961. Best score 152 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:152

F7HVB7              	100.00%		L0P7V8              	100.00%
F6W6Q1              	84.06%		
Bootstrap support for F7HVB7 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #962. Best score 152 bits
Score difference with first non-orthologous sequence - C.jacchus:152 P.jiroveci:152

F7ET97              	100.00%		L0PAY0              	100.00%
Bootstrap support for F7ET97 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #963. Best score 151 bits
Score difference with first non-orthologous sequence - C.jacchus:151 P.jiroveci:151

F6W273              	100.00%		L0PCX3              	100.00%
F7H3J4              	25.97%		
F7H6M6              	10.25%		
Bootstrap support for F6W273 as seed ortholog is 100%.
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #964. Best score 151 bits
Score difference with first non-orthologous sequence - C.jacchus:151 P.jiroveci:151

F6XX29              	100.00%		L0PB59              	100.00%
Bootstrap support for F6XX29 as seed ortholog is 100%.
Bootstrap support for L0PB59 as seed ortholog is 100%.

Group of orthologs #965. Best score 151 bits
Score difference with first non-orthologous sequence - C.jacchus:151 P.jiroveci:33

F6XSM6              	100.00%		L0PGP9              	100.00%
Bootstrap support for F6XSM6 as seed ortholog is 100%.
Bootstrap support for L0PGP9 as seed ortholog is 88%.

Group of orthologs #966. Best score 151 bits
Score difference with first non-orthologous sequence - C.jacchus:151 P.jiroveci:151

F7GZW1              	100.00%		L0PAB2              	100.00%
Bootstrap support for F7GZW1 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #967. Best score 150 bits
Score difference with first non-orthologous sequence - C.jacchus:150 P.jiroveci:150

F6SYN5              	100.00%		L0PCC6              	100.00%
F7IGJ3              	30.95%		
F7HS96              	19.86%		
Bootstrap support for F6SYN5 as seed ortholog is 100%.
Bootstrap support for L0PCC6 as seed ortholog is 100%.

Group of orthologs #968. Best score 150 bits
Score difference with first non-orthologous sequence - C.jacchus:63 P.jiroveci:150

F6UQF1              	100.00%		L0PDJ7              	100.00%
F7I6S2              	18.14%		
Bootstrap support for F6UQF1 as seed ortholog is 99%.
Bootstrap support for L0PDJ7 as seed ortholog is 100%.

Group of orthologs #969. Best score 150 bits
Score difference with first non-orthologous sequence - C.jacchus:150 P.jiroveci:150

F6W7W4              	100.00%		L0P9L8              	100.00%
Bootstrap support for F6W7W4 as seed ortholog is 100%.
Bootstrap support for L0P9L8 as seed ortholog is 100%.

Group of orthologs #970. Best score 150 bits
Score difference with first non-orthologous sequence - C.jacchus:150 P.jiroveci:150

F7EP79              	100.00%		L0P799              	100.00%
Bootstrap support for F7EP79 as seed ortholog is 100%.
Bootstrap support for L0P799 as seed ortholog is 100%.

Group of orthologs #971. Best score 150 bits
Score difference with first non-orthologous sequence - C.jacchus:150 P.jiroveci:150

F7HWG0              	100.00%		L0P9D1              	100.00%
Bootstrap support for F7HWG0 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #972. Best score 149 bits
Score difference with first non-orthologous sequence - C.jacchus:149 P.jiroveci:149

F7CG55              	100.00%		L0PCG3              	100.00%
F6ZCV1              	38.57%		
F7IRH8              	36.43%		
F7I996              	29.64%		
Bootstrap support for F7CG55 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #973. Best score 149 bits
Score difference with first non-orthologous sequence - C.jacchus:149 P.jiroveci:149

F6XC98              	100.00%		L0PA22              	100.00%
Bootstrap support for F6XC98 as seed ortholog is 100%.
Bootstrap support for L0PA22 as seed ortholog is 100%.

Group of orthologs #974. Best score 149 bits
Score difference with first non-orthologous sequence - C.jacchus:149 P.jiroveci:149

F7CYC0              	100.00%		L0PFG9              	100.00%
Bootstrap support for F7CYC0 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #975. Best score 149 bits
Score difference with first non-orthologous sequence - C.jacchus:149 P.jiroveci:149

F7HL53              	100.00%		L0P7U6              	100.00%
Bootstrap support for F7HL53 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #976. Best score 149 bits
Score difference with first non-orthologous sequence - C.jacchus:149 P.jiroveci:149

F7IC68              	100.00%		L0PEZ4              	100.00%
Bootstrap support for F7IC68 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #977. Best score 148 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:148

F7I0E1              	100.00%		L0PB34              	100.00%
F6WAJ8              	63.98%		
F7IG86              	61.49%		
F7IQZ1              	58.39%		
F7IHD0              	47.20%		
F7IHK7              	26.09%		
F6RQR0              	20.50%		
F7H0X3              	14.29%		
Bootstrap support for F7I0E1 as seed ortholog is 99%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #978. Best score 148 bits
Score difference with first non-orthologous sequence - C.jacchus:63 P.jiroveci:62

F7HYV5              	100.00%		L0P9Y3              	100.00%
F7GUL2              	36.76%		
F7I1G3              	31.93%		
F7DX65              	26.32%		
F6S7P4              	26.17%		
F7HQN1              	25.39%		
Bootstrap support for F7HYV5 as seed ortholog is 96%.
Bootstrap support for L0P9Y3 as seed ortholog is 95%.

Group of orthologs #979. Best score 148 bits
Score difference with first non-orthologous sequence - C.jacchus:148 P.jiroveci:148

F7ETE9              	100.00%		L0P778              	100.00%
F7GUF1              	72.37%		
Bootstrap support for F7ETE9 as seed ortholog is 100%.
Bootstrap support for L0P778 as seed ortholog is 100%.

Group of orthologs #980. Best score 148 bits
Score difference with first non-orthologous sequence - C.jacchus:148 P.jiroveci:148

F7GCJ1              	100.00%		L0P9U0              	100.00%
Bootstrap support for F7GCJ1 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #981. Best score 148 bits
Score difference with first non-orthologous sequence - C.jacchus:148 P.jiroveci:148

F7GJV7              	100.00%		L0P9B3              	100.00%
Bootstrap support for F7GJV7 as seed ortholog is 100%.
Bootstrap support for L0P9B3 as seed ortholog is 100%.

Group of orthologs #982. Best score 147 bits
Score difference with first non-orthologous sequence - C.jacchus:43 P.jiroveci:147

F6SC90              	100.00%		L0PG65              	100.00%
F7GM40              	40.32%		
Bootstrap support for F6SC90 as seed ortholog is 89%.
Bootstrap support for L0PG65 as seed ortholog is 100%.

Group of orthologs #983. Best score 147 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:147

F7I2A1              	100.00%		L0PBZ4              	100.00%
F7I0D6              	25.82%		
Bootstrap support for F7I2A1 as seed ortholog is 99%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #984. Best score 147 bits
Score difference with first non-orthologous sequence - C.jacchus:45 P.jiroveci:147

F7HNM7              	100.00%		L0PEX0              	100.00%
Bootstrap support for F7HNM7 as seed ortholog is 99%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #985. Best score 147 bits
Score difference with first non-orthologous sequence - C.jacchus:147 P.jiroveci:147

F7HKZ3              	100.00%		L0PGI9              	100.00%
Bootstrap support for F7HKZ3 as seed ortholog is 100%.
Bootstrap support for L0PGI9 as seed ortholog is 100%.

Group of orthologs #986. Best score 146 bits
Score difference with first non-orthologous sequence - C.jacchus:146 P.jiroveci:146

F6Q7V8              	100.00%		L0P9F5              	100.00%
F7I597              	51.27%		
F7AE35              	9.06%		
Bootstrap support for F6Q7V8 as seed ortholog is 100%.
Bootstrap support for L0P9F5 as seed ortholog is 100%.

Group of orthologs #987. Best score 146 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:146

F7IHC8              	100.00%		L0P7A4              	100.00%
Bootstrap support for F7IHC8 as seed ortholog is 98%.
Bootstrap support for L0P7A4 as seed ortholog is 100%.

Group of orthologs #988. Best score 145 bits
Score difference with first non-orthologous sequence - C.jacchus:145 P.jiroveci:145

F7IBI7              	100.00%		L0PDZ3              	100.00%
F6RPQ7              	13.36%		
Bootstrap support for F7IBI7 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #989. Best score 145 bits
Score difference with first non-orthologous sequence - C.jacchus:145 P.jiroveci:145

F6UBC6              	100.00%		L0PEG7              	100.00%
Bootstrap support for F6UBC6 as seed ortholog is 100%.
Bootstrap support for L0PEG7 as seed ortholog is 100%.

Group of orthologs #990. Best score 145 bits
Score difference with first non-orthologous sequence - C.jacchus:145 P.jiroveci:145

F7E4F8              	100.00%		L0P7V4              	100.00%
Bootstrap support for F7E4F8 as seed ortholog is 100%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #991. Best score 145 bits
Score difference with first non-orthologous sequence - C.jacchus:145 P.jiroveci:145

F7EII6              	100.00%		L0PFY6              	100.00%
Bootstrap support for F7EII6 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #992. Best score 144 bits
Score difference with first non-orthologous sequence - C.jacchus:144 P.jiroveci:144

F7II95              	100.00%		L0P805              	100.00%
F7GAP8              	50.77%		
F7GTN6              	44.87%		
Bootstrap support for F7II95 as seed ortholog is 100%.
Bootstrap support for L0P805 as seed ortholog is 100%.

Group of orthologs #993. Best score 144 bits
Score difference with first non-orthologous sequence - C.jacchus:53 P.jiroveci:94

F7EDS7              	100.00%		L0P9F8              	100.00%
F7H9S1              	17.26%		
Bootstrap support for F7EDS7 as seed ortholog is 92%.
Bootstrap support for L0P9F8 as seed ortholog is 99%.

Group of orthologs #994. Best score 144 bits
Score difference with first non-orthologous sequence - C.jacchus:144 P.jiroveci:144

F7H696              	100.00%		L0PEB8              	100.00%
F7I0S4              	38.99%		
Bootstrap support for F7H696 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #995. Best score 144 bits
Score difference with first non-orthologous sequence - C.jacchus:144 P.jiroveci:144

F6TEL6              	100.00%		L0PBI8              	100.00%
Bootstrap support for F6TEL6 as seed ortholog is 100%.
Bootstrap support for L0PBI8 as seed ortholog is 100%.

Group of orthologs #996. Best score 144 bits
Score difference with first non-orthologous sequence - C.jacchus:144 P.jiroveci:144

F7ESP6              	100.00%		L0PFD5              	100.00%
Bootstrap support for F7ESP6 as seed ortholog is 100%.
Bootstrap support for L0PFD5 as seed ortholog is 100%.

Group of orthologs #997. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F6XBB6              	100.00%		L0PGY5              	100.00%
F6YKA8              	89.74%		
F7E9Z6              	89.74%		
F7HV27              	82.31%		
F7HV87              	77.18%		
F7CV91              	74.62%		
F7HS91              	74.36%		
F7HB66              	72.56%		
F7INQ7              	71.03%		
F6X4S7              	69.74%		
F7E7I2              	62.82%		
F7I914              	62.31%		
F7B102              	62.31%		
F6PRR5              	61.03%		
F7HVQ3              	57.69%		
F7IMY5              	50.00%		
F7GHB3              	37.44%		
F7DWM4              	17.69%		
F7ADJ2              	7.18%		
Bootstrap support for F6XBB6 as seed ortholog is 100%.
Bootstrap support for L0PGY5 as seed ortholog is 100%.

Group of orthologs #998. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F6S431              	100.00%		L0P8P0              	100.00%
F7IJ64              	80.53%		
Bootstrap support for F6S431 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #999. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:49 P.jiroveci:143

F6ZWN4              	100.00%		L0P963              	100.00%
F7ABJ4              	67.38%		
Bootstrap support for F6ZWN4 as seed ortholog is 94%.
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #1000. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F7IHY3              	100.00%		L0P800              	100.00%
F6Y398              	63.46%		
Bootstrap support for F7IHY3 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #1001. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F6XXM7              	100.00%		L0PBG3              	100.00%
Bootstrap support for F6XXM7 as seed ortholog is 100%.
Bootstrap support for L0PBG3 as seed ortholog is 100%.

Group of orthologs #1002. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F6Y1Z9              	100.00%		L0PGP5              	100.00%
Bootstrap support for F6Y1Z9 as seed ortholog is 100%.
Bootstrap support for L0PGP5 as seed ortholog is 100%.

Group of orthologs #1003. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F7C5B3              	100.00%		L0P9V3              	100.00%
Bootstrap support for F7C5B3 as seed ortholog is 100%.
Bootstrap support for L0P9V3 as seed ortholog is 100%.

Group of orthologs #1004. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:81 P.jiroveci:143

F7GNF7              	100.00%		L0P948              	100.00%
Bootstrap support for F7GNF7 as seed ortholog is 99%.
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #1005. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:143

F7HF21              	100.00%		L0P7E9              	100.00%
Bootstrap support for F7HF21 as seed ortholog is 99%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #1006. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F7HLR8              	100.00%		L0PFH2              	100.00%
Bootstrap support for F7HLR8 as seed ortholog is 100%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #1007. Best score 143 bits
Score difference with first non-orthologous sequence - C.jacchus:143 P.jiroveci:143

F7I6T2              	100.00%		L0PFR0              	100.00%
Bootstrap support for F7I6T2 as seed ortholog is 100%.
Bootstrap support for L0PFR0 as seed ortholog is 100%.

Group of orthologs #1008. Best score 142 bits
Score difference with first non-orthologous sequence - C.jacchus:142 P.jiroveci:142

F7I9F8              	100.00%		L0P8D7              	100.00%
F7FE96              	31.97%		
Bootstrap support for F7I9F8 as seed ortholog is 100%.
Bootstrap support for L0P8D7 as seed ortholog is 100%.

Group of orthologs #1009. Best score 142 bits
Score difference with first non-orthologous sequence - C.jacchus:142 P.jiroveci:100

F6ZHB6              	100.00%		L0PA67              	100.00%
Bootstrap support for F6ZHB6 as seed ortholog is 100%.
Bootstrap support for L0PA67 as seed ortholog is 99%.

Group of orthologs #1010. Best score 142 bits
Score difference with first non-orthologous sequence - C.jacchus:142 P.jiroveci:142

F7EV34              	100.00%		L0PCP0              	100.00%
Bootstrap support for F7EV34 as seed ortholog is 100%.
Bootstrap support for L0PCP0 as seed ortholog is 100%.

Group of orthologs #1011. Best score 141 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:141

F6PN21              	100.00%		L0PA83              	100.00%
F7IE16              	94.74%		
F7HU52              	94.15%		
H9KXW7              	78.95%		
F7HPW0              	75.44%		
F7DG73              	34.50%		
Bootstrap support for F6PN21 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #1012. Best score 141 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:141

F7F5W3              	100.00%		L0PE36              	100.00%
F7E7C6              	44.68%		
Bootstrap support for F7F5W3 as seed ortholog is 100%.
Bootstrap support for L0PE36 as seed ortholog is 100%.

Group of orthologs #1013. Best score 141 bits
Score difference with first non-orthologous sequence - C.jacchus:141 P.jiroveci:141

F6Z8G2              	100.00%		L0PDW9              	100.00%
Bootstrap support for F6Z8G2 as seed ortholog is 100%.
Bootstrap support for L0PDW9 as seed ortholog is 100%.

Group of orthologs #1014. Best score 141 bits
Score difference with first non-orthologous sequence - C.jacchus:37 P.jiroveci:141

F7IHJ3              	100.00%		L0P903              	100.00%
Bootstrap support for F7IHJ3 as seed ortholog is 93%.
Bootstrap support for L0P903 as seed ortholog is 100%.

Group of orthologs #1015. Best score 140 bits
Score difference with first non-orthologous sequence - C.jacchus:140 P.jiroveci:140

F6WYB8              	100.00%		L0PAA1              	100.00%
F6TLX7              	56.55%		
Bootstrap support for F6WYB8 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #1016. Best score 139 bits
Score difference with first non-orthologous sequence - C.jacchus:50 P.jiroveci:139

F7GCC8              	100.00%		L0P9S9              	100.00%
F7FD91              	47.94%		L0PDT3              	43.32%
F7I3C7              	38.62%		
F7EF30              	34.81%		
F7E441              	26.67%		
F7FTV8              	22.65%		
Bootstrap support for F7GCC8 as seed ortholog is 87%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #1017. Best score 139 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:139

F7I8Y2              	100.00%		L0P938              	100.00%
F7HR40              	62.44%		
Bootstrap support for F7I8Y2 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 100%.

Group of orthologs #1018. Best score 139 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:139

F6TZ08              	100.00%		L0PCC8              	100.00%
Bootstrap support for F6TZ08 as seed ortholog is 100%.
Bootstrap support for L0PCC8 as seed ortholog is 100%.

Group of orthologs #1019. Best score 139 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:139

F6ZGY9              	100.00%		L0PAW7              	100.00%
Bootstrap support for F6ZGY9 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #1020. Best score 139 bits
Score difference with first non-orthologous sequence - C.jacchus:139 P.jiroveci:139

F7C4S5              	100.00%		L0P9E5              	100.00%
Bootstrap support for F7C4S5 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #1021. Best score 138 bits
Score difference with first non-orthologous sequence - C.jacchus:138 P.jiroveci:78

F7BEU4              	100.00%		L0P7L8              	100.00%
F7H188              	43.06%		L0P7X4              	9.15%
Bootstrap support for F7BEU4 as seed ortholog is 100%.
Bootstrap support for L0P7L8 as seed ortholog is 98%.

Group of orthologs #1022. Best score 138 bits
Score difference with first non-orthologous sequence - C.jacchus:138 P.jiroveci:138

F7CD10              	100.00%		L0PF66              	100.00%
F7IQU9              	46.29%		
Bootstrap support for F7CD10 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #1023. Best score 138 bits
Score difference with first non-orthologous sequence - C.jacchus:138 P.jiroveci:138

F6REA6              	100.00%		L0PB69              	100.00%
Bootstrap support for F6REA6 as seed ortholog is 100%.
Bootstrap support for L0PB69 as seed ortholog is 100%.

Group of orthologs #1024. Best score 137 bits
Score difference with first non-orthologous sequence - C.jacchus:137 P.jiroveci:137

F6WG86              	100.00%		L0PG78              	100.00%
Bootstrap support for F6WG86 as seed ortholog is 100%.
Bootstrap support for L0PG78 as seed ortholog is 100%.

Group of orthologs #1025. Best score 137 bits
Score difference with first non-orthologous sequence - C.jacchus:81 P.jiroveci:137

F7FVZ5              	100.00%		L0P8I2              	100.00%
Bootstrap support for F7FVZ5 as seed ortholog is 99%.
Bootstrap support for L0P8I2 as seed ortholog is 100%.

Group of orthologs #1026. Best score 136 bits
Score difference with first non-orthologous sequence - C.jacchus:136 P.jiroveci:136

F7IJR4              	100.00%		L0PE18              	100.00%
F7G595              	42.20%		
F7C056              	15.77%		
F6QIT4              	14.87%		
F6WCL3              	13.35%		
F6U4N2              	11.92%		
F6ZPL6              	9.86%		
F7A7N6              	9.41%		
F7II55              	7.62%		
F7GZ61              	5.02%		
Bootstrap support for F7IJR4 as seed ortholog is 100%.
Bootstrap support for L0PE18 as seed ortholog is 100%.

Group of orthologs #1027. Best score 136 bits
Score difference with first non-orthologous sequence - C.jacchus:136 P.jiroveci:136

F7GVW5              	100.00%		L0PCA3              	100.00%
F7HXC4              	20.42%		
F7I5R3              	18.49%		
Bootstrap support for F7GVW5 as seed ortholog is 100%.
Bootstrap support for L0PCA3 as seed ortholog is 100%.

Group of orthologs #1028. Best score 136 bits
Score difference with first non-orthologous sequence - C.jacchus:136 P.jiroveci:136

F7HZS6              	100.00%		L0P8Z8              	100.00%
                    	       		L0PFN6              	78.69%
Bootstrap support for F7HZS6 as seed ortholog is 100%.
Bootstrap support for L0P8Z8 as seed ortholog is 100%.

Group of orthologs #1029. Best score 136 bits
Score difference with first non-orthologous sequence - C.jacchus:136 P.jiroveci:136

F6YMU0              	100.00%		L0PAS7              	100.00%
Bootstrap support for F6YMU0 as seed ortholog is 100%.
Bootstrap support for L0PAS7 as seed ortholog is 100%.

Group of orthologs #1030. Best score 136 bits
Score difference with first non-orthologous sequence - C.jacchus:136 P.jiroveci:136

F7HZT2              	100.00%		L0P7A1              	100.00%
Bootstrap support for F7HZT2 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #1031. Best score 135 bits
Score difference with first non-orthologous sequence - C.jacchus:77 P.jiroveci:135

F7AL12              	100.00%		L0PCT4              	100.00%
F7A2X5              	63.89%		
F6VMN1              	50.18%		
F7F5P6              	43.82%		
Bootstrap support for F7AL12 as seed ortholog is 97%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 135 bits
Score difference with first non-orthologous sequence - C.jacchus:135 P.jiroveci:135

F6UHC1              	100.00%		L0PAN5              	100.00%
Bootstrap support for F6UHC1 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #1033. Best score 135 bits
Score difference with first non-orthologous sequence - C.jacchus:135 P.jiroveci:135

F6TR92              	100.00%		L0PFP4              	100.00%
Bootstrap support for F6TR92 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #1034. Best score 134 bits
Score difference with first non-orthologous sequence - C.jacchus:134 P.jiroveci:134

F7HYQ3              	100.00%		L0PFS7              	100.00%
F6V372              	32.98%		
Bootstrap support for F7HYQ3 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #1035. Best score 134 bits
Score difference with first non-orthologous sequence - C.jacchus:134 P.jiroveci:134

F6T531              	100.00%		L0P733              	100.00%
Bootstrap support for F6T531 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #1036. Best score 134 bits
Score difference with first non-orthologous sequence - C.jacchus:134 P.jiroveci:134

F7GH31              	100.00%		L0PEI9              	100.00%
Bootstrap support for F7GH31 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #1037. Best score 134 bits
Score difference with first non-orthologous sequence - C.jacchus:134 P.jiroveci:134

F7I096              	100.00%		L0PEV6              	100.00%
Bootstrap support for F7I096 as seed ortholog is 100%.
Bootstrap support for L0PEV6 as seed ortholog is 100%.

Group of orthologs #1038. Best score 134 bits
Score difference with first non-orthologous sequence - C.jacchus:134 P.jiroveci:134

F7IIX4              	100.00%		L0PA35              	100.00%
Bootstrap support for F7IIX4 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #1039. Best score 133 bits
Score difference with first non-orthologous sequence - C.jacchus:133 P.jiroveci:133

F6UVA8              	100.00%		L0P7K4              	100.00%
                    	       		L0P859              	81.89%
Bootstrap support for F6UVA8 as seed ortholog is 100%.
Bootstrap support for L0P7K4 as seed ortholog is 100%.

Group of orthologs #1040. Best score 133 bits
Score difference with first non-orthologous sequence - C.jacchus:133 P.jiroveci:133

F6QSL5              	100.00%		L0PB31              	100.00%
Bootstrap support for F6QSL5 as seed ortholog is 100%.
Bootstrap support for L0PB31 as seed ortholog is 100%.

Group of orthologs #1041. Best score 133 bits
Score difference with first non-orthologous sequence - C.jacchus:133 P.jiroveci:133

F7DH12              	100.00%		L0P8G0              	100.00%
Bootstrap support for F7DH12 as seed ortholog is 100%.
Bootstrap support for L0P8G0 as seed ortholog is 100%.

Group of orthologs #1042. Best score 132 bits
Score difference with first non-orthologous sequence - C.jacchus:132 P.jiroveci:132

F7IRW3              	100.00%		L0PDN8              	100.00%
F7EJB8              	5.81%		
Bootstrap support for F7IRW3 as seed ortholog is 100%.
Bootstrap support for L0PDN8 as seed ortholog is 100%.

Group of orthologs #1043. Best score 132 bits
Score difference with first non-orthologous sequence - C.jacchus:132 P.jiroveci:132

F6QIQ0              	100.00%		L0PBH3              	100.00%
Bootstrap support for F6QIQ0 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 132 bits
Score difference with first non-orthologous sequence - C.jacchus:132 P.jiroveci:132

F7I4J3              	100.00%		L0PCZ5              	100.00%
Bootstrap support for F7I4J3 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #1045. Best score 131 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:131

F7EH04              	100.00%		L0P9N5              	100.00%
F6W0Y4              	47.21%		
F6Q047              	43.15%		
F7H9B3              	38.58%		
F7ILD4              	22.84%		
F7HW43              	15.74%		
F7GG74              	7.61%		
Bootstrap support for F7EH04 as seed ortholog is 99%.
Bootstrap support for L0P9N5 as seed ortholog is 100%.

Group of orthologs #1046. Best score 131 bits
Score difference with first non-orthologous sequence - C.jacchus:131 P.jiroveci:131

F6U184              	100.00%		L0PBR1              	100.00%
Bootstrap support for F6U184 as seed ortholog is 100%.
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #1047. Best score 131 bits
Score difference with first non-orthologous sequence - C.jacchus:131 P.jiroveci:131

F7G515              	100.00%		L0PFH1              	100.00%
Bootstrap support for F7G515 as seed ortholog is 100%.
Bootstrap support for L0PFH1 as seed ortholog is 100%.

Group of orthologs #1048. Best score 131 bits
Score difference with first non-orthologous sequence - C.jacchus:131 P.jiroveci:131

F7HWV2              	100.00%		L0PAZ1              	100.00%
Bootstrap support for F7HWV2 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #1049. Best score 130 bits
Score difference with first non-orthologous sequence - C.jacchus:130 P.jiroveci:130

F7H4F1              	100.00%		L0PGC9              	100.00%
F7FQP7              	83.15%		
F7IL07              	80.98%		
F7IT24              	67.93%		
F7IT22              	66.30%		
Bootstrap support for F7H4F1 as seed ortholog is 100%.
Bootstrap support for L0PGC9 as seed ortholog is 100%.

Group of orthologs #1050. Best score 130 bits
Score difference with first non-orthologous sequence - C.jacchus:130 P.jiroveci:130

F6YZH4              	100.00%		L0PEL6              	100.00%
Bootstrap support for F6YZH4 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #1051. Best score 130 bits
Score difference with first non-orthologous sequence - C.jacchus:130 P.jiroveci:130

F7G0P6              	100.00%		L0PDZ4              	100.00%
Bootstrap support for F7G0P6 as seed ortholog is 100%.
Bootstrap support for L0PDZ4 as seed ortholog is 100%.

Group of orthologs #1052. Best score 129 bits
Score difference with first non-orthologous sequence - C.jacchus:129 P.jiroveci:129

F7DEL8              	100.00%		L0P940              	100.00%
F7HFY3              	98.39%		
F7CV65              	96.77%		
F7DXF7              	93.55%		
F7I245              	87.10%		
F7IT28              	80.65%		
F7E922              	80.65%		
F7HQ81              	71.77%		
F7F9G7              	66.94%		
F7FEE2              	62.90%		
F7HUZ8              	55.65%		
F7IKC9              	53.23%		
F7IIG3              	49.19%		
F7I771              	48.39%		
F7CMI1              	45.16%		
F7DX82              	43.55%		
F6UMH4              	40.32%		
F7I4M3              	28.23%		
F7H8D2              	23.39%		
H9KXV9              	20.97%		
F7FGH0              	14.52%		
Bootstrap support for F7DEL8 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #1053. Best score 129 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:129

F7HLM0              	100.00%		L0P9Q9              	100.00%
F7ERU0              	9.99%		
F6XFH3              	8.30%		
F6V9K8              	5.20%		
Bootstrap support for F7HLM0 as seed ortholog is 97%.
Bootstrap support for L0P9Q9 as seed ortholog is 100%.

Group of orthologs #1054. Best score 129 bits
Score difference with first non-orthologous sequence - C.jacchus:129 P.jiroveci:129

B0VX74              	100.00%		L0PDE5              	100.00%
Bootstrap support for B0VX74 as seed ortholog is 100%.
Bootstrap support for L0PDE5 as seed ortholog is 100%.

Group of orthologs #1055. Best score 129 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:129

F6R8W5              	100.00%		L0PG59              	100.00%
Bootstrap support for F6R8W5 as seed ortholog is 99%.
Bootstrap support for L0PG59 as seed ortholog is 100%.

Group of orthologs #1056. Best score 129 bits
Score difference with first non-orthologous sequence - C.jacchus:129 P.jiroveci:129

Q8HXP0              	100.00%		L0PD77              	100.00%
Bootstrap support for Q8HXP0 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 100%.

Group of orthologs #1057. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F7GC20              	100.00%		L0PG87              	100.00%
F7HQ77              	100.00%		
F7G5C6              	98.77%		
F7H5A4              	96.30%		
B0VXL1              	94.44%		
F7E9H5              	93.83%		
F7FTW4              	93.21%		
F7IQW8              	91.98%		
F7B5C8              	81.37%		
F7G6P4              	79.01%		
H9KXX9              	77.16%		
F7IGH7              	72.84%		
H9KWF6              	17.90%		
Bootstrap support for F7GC20 as seed ortholog is 100%.
Bootstrap support for F7HQ77 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #1058. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:84 P.jiroveci:128

F7G0E5              	100.00%		L0PFV4              	100.00%
F7I3B7              	71.13%		
F7I2D9              	39.69%		
F7HRT6              	22.16%		
Bootstrap support for F7G0E5 as seed ortholog is 100%.
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #1059. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F7BMG6              	100.00%		L0P6Q5              	100.00%
F6YM87              	60.55%		
Bootstrap support for F7BMG6 as seed ortholog is 100%.
Bootstrap support for L0P6Q5 as seed ortholog is 100%.

Group of orthologs #1060. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F7GUN7              	100.00%		L0P9M3              	100.00%
F7HV47              	83.89%		
Bootstrap support for F7GUN7 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #1061. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:128

F6TEJ5              	100.00%		L0PDE3              	100.00%
Bootstrap support for F6TEJ5 as seed ortholog is 99%.
Bootstrap support for L0PDE3 as seed ortholog is 100%.

Group of orthologs #1062. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F6WCT3              	100.00%		L0PCC0              	100.00%
Bootstrap support for F6WCT3 as seed ortholog is 100%.
Bootstrap support for L0PCC0 as seed ortholog is 100%.

Group of orthologs #1063. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F6XS48              	100.00%		L0PD60              	100.00%
Bootstrap support for F6XS48 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #1064. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F7G0R1              	100.00%		L0PFR7              	100.00%
Bootstrap support for F7G0R1 as seed ortholog is 100%.
Bootstrap support for L0PFR7 as seed ortholog is 100%.

Group of orthologs #1065. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 P.jiroveci:128

F7IJ04              	100.00%		L0PEV4              	100.00%
Bootstrap support for F7IJ04 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #1066. Best score 127 bits
Score difference with first non-orthologous sequence - C.jacchus:127 P.jiroveci:127

F6Z2L3              	100.00%		L0P9C0              	100.00%
F6YKW1              	81.44%		
Bootstrap support for F6Z2L3 as seed ortholog is 100%.
Bootstrap support for L0P9C0 as seed ortholog is 100%.

Group of orthologs #1067. Best score 127 bits
Score difference with first non-orthologous sequence - C.jacchus:127 P.jiroveci:127

F7EMJ5              	100.00%		L0PDW7              	100.00%
                    	       		L0PIN1              	60.15%
Bootstrap support for F7EMJ5 as seed ortholog is 100%.
Bootstrap support for L0PDW7 as seed ortholog is 100%.

Group of orthologs #1068. Best score 127 bits
Score difference with first non-orthologous sequence - C.jacchus:127 P.jiroveci:127

F6S6V9              	100.00%		L0PFM7              	100.00%
Bootstrap support for F6S6V9 as seed ortholog is 100%.
Bootstrap support for L0PFM7 as seed ortholog is 100%.

Group of orthologs #1069. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

F6RVY2              	100.00%		L0P8K4              	100.00%
F6XKT0              	24.75%		
F7HAB6              	13.53%		
Bootstrap support for F6RVY2 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #1070. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

F7G0I7              	100.00%		L0PBU1              	100.00%
F7C1I3              	69.08%		
Bootstrap support for F7G0I7 as seed ortholog is 100%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #1071. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

F7H8L2              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	82.82%
Bootstrap support for F7H8L2 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #1072. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

F7IKA8              	100.00%		L0PCB4              	100.00%
F7AA75              	31.69%		
Bootstrap support for F7IKA8 as seed ortholog is 100%.
Bootstrap support for L0PCB4 as seed ortholog is 100%.

Group of orthologs #1073. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

B0VX71              	100.00%		L0P9L0              	100.00%
Bootstrap support for B0VX71 as seed ortholog is 100%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #1074. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

F6RF60              	100.00%		L0PFD1              	100.00%
Bootstrap support for F6RF60 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #1075. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:126 P.jiroveci:126

F7G966              	100.00%		L0P9F2              	100.00%
Bootstrap support for F7G966 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #1076. Best score 126 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:126

F7I8L7              	100.00%		L0PA97              	100.00%
Bootstrap support for F7I8L7 as seed ortholog is 99%.
Bootstrap support for L0PA97 as seed ortholog is 100%.

Group of orthologs #1077. Best score 125 bits
Score difference with first non-orthologous sequence - C.jacchus:125 P.jiroveci:125

F7G7W3              	100.00%		L0PEP9              	100.00%
H9KWW3              	88.79%		
F7IGE2              	85.05%		
F7ITB3              	78.50%		
F7IE63              	47.66%		
F6Q812              	28.04%		
Bootstrap support for F7G7W3 as seed ortholog is 100%.
Bootstrap support for L0PEP9 as seed ortholog is 100%.

Group of orthologs #1078. Best score 125 bits
Score difference with first non-orthologous sequence - C.jacchus:125 P.jiroveci:125

F7I342              	100.00%		L0PA43              	100.00%
B0KWA3              	30.16%		
Bootstrap support for F7I342 as seed ortholog is 100%.
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #1079. Best score 125 bits
Score difference with first non-orthologous sequence - C.jacchus:125 P.jiroveci:125

F6Q4A4              	100.00%		L0PF00              	100.00%
Bootstrap support for F6Q4A4 as seed ortholog is 100%.
Bootstrap support for L0PF00 as seed ortholog is 100%.

Group of orthologs #1080. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F7G9J4              	100.00%		L0PEQ2              	100.00%
F7AR70              	12.64%		L0P999              	60.21%
Bootstrap support for F7G9J4 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #1081. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F6WAM2              	100.00%		L0PFZ8              	100.00%
F7IHH5              	6.32%		
Bootstrap support for F6WAM2 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #1082. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F7F117              	100.00%		L0PG46              	100.00%
F7DF97              	22.27%		
Bootstrap support for F7F117 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #1083. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F6Z4S6              	100.00%		L0PBQ0              	100.00%
Bootstrap support for F6Z4S6 as seed ortholog is 100%.
Bootstrap support for L0PBQ0 as seed ortholog is 100%.

Group of orthologs #1084. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F7GZU3              	100.00%		L0P9Q6              	100.00%
Bootstrap support for F7GZU3 as seed ortholog is 100%.
Bootstrap support for L0P9Q6 as seed ortholog is 100%.

Group of orthologs #1085. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F7INM9              	100.00%		L0P752              	100.00%
Bootstrap support for F7INM9 as seed ortholog is 100%.
Bootstrap support for L0P752 as seed ortholog is 100%.

Group of orthologs #1086. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F7INW3              	100.00%		L0PFP3              	100.00%
Bootstrap support for F7INW3 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #1087. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 P.jiroveci:124

F7ISQ0              	100.00%		L0PFZ3              	100.00%
Bootstrap support for F7ISQ0 as seed ortholog is 100%.
Bootstrap support for L0PFZ3 as seed ortholog is 100%.

Group of orthologs #1088. Best score 123 bits
Score difference with first non-orthologous sequence - C.jacchus:123 P.jiroveci:123

F6YJJ5              	100.00%		L0PAM9              	100.00%
F7AMV9              	52.42%		
F7ISE5              	28.57%		
Bootstrap support for F6YJJ5 as seed ortholog is 100%.
Bootstrap support for L0PAM9 as seed ortholog is 100%.

Group of orthologs #1089. Best score 123 bits
Score difference with first non-orthologous sequence - C.jacchus:123 P.jiroveci:123

F7A1C9              	100.00%		L0P8G3              	100.00%
F7GR93              	42.00%		
Bootstrap support for F7A1C9 as seed ortholog is 100%.
Bootstrap support for L0P8G3 as seed ortholog is 100%.

Group of orthologs #1090. Best score 123 bits
Score difference with first non-orthologous sequence - C.jacchus:123 P.jiroveci:123

F7B4D2              	100.00%		L0PB27              	100.00%
Bootstrap support for F7B4D2 as seed ortholog is 100%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #1091. Best score 123 bits
Score difference with first non-orthologous sequence - C.jacchus:123 P.jiroveci:123

F7EQF7              	100.00%		L0PAT4              	100.00%
Bootstrap support for F7EQF7 as seed ortholog is 100%.
Bootstrap support for L0PAT4 as seed ortholog is 100%.

Group of orthologs #1092. Best score 123 bits
Score difference with first non-orthologous sequence - C.jacchus:123 P.jiroveci:123

F7HWG2              	100.00%		L0PC08              	100.00%
Bootstrap support for F7HWG2 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #1093. Best score 123 bits
Score difference with first non-orthologous sequence - C.jacchus:39 P.jiroveci:123

F7IDT1              	100.00%		L0PGC0              	100.00%
Bootstrap support for F7IDT1 as seed ortholog is 91%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #1094. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:122

F6Z1Y3              	100.00%		L0P6Z0              	100.00%
F7IN54              	30.59%		
F7IL46              	12.07%		
Bootstrap support for F6Z1Y3 as seed ortholog is 99%.
Bootstrap support for L0P6Z0 as seed ortholog is 100%.

Group of orthologs #1095. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F6RUG6              	100.00%		L0PEZ7              	100.00%
F7EGX1              	28.57%		
Bootstrap support for F6RUG6 as seed ortholog is 100%.
Bootstrap support for L0PEZ7 as seed ortholog is 100%.

Group of orthologs #1096. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F6XHC3              	100.00%		L0PFD0              	100.00%
F7FHP3              	75.71%		
Bootstrap support for F6XHC3 as seed ortholog is 100%.
Bootstrap support for L0PFD0 as seed ortholog is 100%.

Group of orthologs #1097. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:42 P.jiroveci:122

F6T3R8              	100.00%		L0PB53              	100.00%
Bootstrap support for F6T3R8 as seed ortholog is 88%.
Bootstrap support for L0PB53 as seed ortholog is 100%.

Group of orthologs #1098. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F6XJA0              	100.00%		L0PCX0              	100.00%
Bootstrap support for F6XJA0 as seed ortholog is 100%.
Bootstrap support for L0PCX0 as seed ortholog is 100%.

Group of orthologs #1099. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F7F9F4              	100.00%		L0P9B0              	100.00%
Bootstrap support for F7F9F4 as seed ortholog is 100%.
Bootstrap support for L0P9B0 as seed ortholog is 100%.

Group of orthologs #1100. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F7GSB1              	100.00%		L0PDX2              	100.00%
Bootstrap support for F7GSB1 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #1101. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F7I972              	100.00%		L0PD37              	100.00%
Bootstrap support for F7I972 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #1102. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 P.jiroveci:122

F7IRJ9              	100.00%		L0PIT4              	100.00%
Bootstrap support for F7IRJ9 as seed ortholog is 100%.
Bootstrap support for L0PIT4 as seed ortholog is 100%.

Group of orthologs #1103. Best score 121 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:121

F7C2X5              	100.00%		L0P9A1              	100.00%
Bootstrap support for F7C2X5 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #1104. Best score 121 bits
Score difference with first non-orthologous sequence - C.jacchus:121 P.jiroveci:121

F7DRN1              	100.00%		L0PAK9              	100.00%
Bootstrap support for F7DRN1 as seed ortholog is 100%.
Bootstrap support for L0PAK9 as seed ortholog is 100%.

Group of orthologs #1105. Best score 121 bits
Score difference with first non-orthologous sequence - C.jacchus:121 P.jiroveci:121

F7G899              	100.00%		L0PH76              	100.00%
Bootstrap support for F7G899 as seed ortholog is 100%.
Bootstrap support for L0PH76 as seed ortholog is 100%.

Group of orthologs #1106. Best score 121 bits
Score difference with first non-orthologous sequence - C.jacchus:121 P.jiroveci:121

F7I803              	100.00%		L0PCU6              	100.00%
Bootstrap support for F7I803 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #1107. Best score 121 bits
Score difference with first non-orthologous sequence - C.jacchus:54 P.jiroveci:121

F7IAL6              	100.00%		L0PF38              	100.00%
Bootstrap support for F7IAL6 as seed ortholog is 96%.
Bootstrap support for L0PF38 as seed ortholog is 100%.

Group of orthologs #1108. Best score 121 bits
Score difference with first non-orthologous sequence - C.jacchus:121 P.jiroveci:121

H9KXA4              	100.00%		L0PF16              	100.00%
Bootstrap support for H9KXA4 as seed ortholog is 100%.
Bootstrap support for L0PF16 as seed ortholog is 100%.

Group of orthologs #1109. Best score 120 bits
Score difference with first non-orthologous sequence - C.jacchus:120 P.jiroveci:120

F7IRK9              	100.00%		L0PF62              	100.00%
F7F1Q5              	47.95%		
Bootstrap support for F7IRK9 as seed ortholog is 100%.
Bootstrap support for L0PF62 as seed ortholog is 100%.

Group of orthologs #1110. Best score 119 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:119

F6SLI6              	100.00%		L0P816              	100.00%
F7HMP9              	37.96%		
Bootstrap support for F6SLI6 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #1111. Best score 119 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:119

F7I264              	100.00%		L0P7C8              	100.00%
F7EIK5              	44.33%		
Bootstrap support for F7I264 as seed ortholog is 100%.
Bootstrap support for L0P7C8 as seed ortholog is 100%.

Group of orthologs #1112. Best score 119 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:119

F7HWG8              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	94.68%
Bootstrap support for F7HWG8 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 119 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:119

F7DAR7              	100.00%		L0PCY1              	100.00%
Bootstrap support for F7DAR7 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #1114. Best score 119 bits
Score difference with first non-orthologous sequence - C.jacchus:119 P.jiroveci:119

F7HIR2              	100.00%		L0P7Y4              	100.00%
Bootstrap support for F7HIR2 as seed ortholog is 100%.
Bootstrap support for L0P7Y4 as seed ortholog is 100%.

Group of orthologs #1115. Best score 118 bits
Score difference with first non-orthologous sequence - C.jacchus:118 P.jiroveci:118

F7IBK7              	100.00%		L0P6Z5              	100.00%
F6SRE4              	40.47%		
F7EMV5              	25.34%		
Bootstrap support for F7IBK7 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #1116. Best score 118 bits
Score difference with first non-orthologous sequence - C.jacchus:118 P.jiroveci:118

F7H008              	100.00%		L0PGF6              	100.00%
F7GWK8              	37.79%		
Bootstrap support for F7H008 as seed ortholog is 100%.
Bootstrap support for L0PGF6 as seed ortholog is 100%.

Group of orthologs #1117. Best score 118 bits
Score difference with first non-orthologous sequence - C.jacchus:118 P.jiroveci:118

F7ICR4              	100.00%		L0P9A7              	100.00%
F7G615              	97.70%		
Bootstrap support for F7ICR4 as seed ortholog is 100%.
Bootstrap support for L0P9A7 as seed ortholog is 100%.

Group of orthologs #1118. Best score 118 bits
Score difference with first non-orthologous sequence - C.jacchus:11 P.jiroveci:118

F7I8C1              	100.00%		L0PBW0              	100.00%
F6TIK9              	34.26%		
Bootstrap support for F7I8C1 as seed ortholog is 62%.
Alternative seed ortholog is F7I2W5 (11 bits away from this cluster)
Bootstrap support for L0PBW0 as seed ortholog is 100%.

Group of orthologs #1119. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:117 P.jiroveci:117

F7BRV7              	100.00%		L0PD00              	100.00%
F7IT07              	96.93%		
F7FGF6              	92.54%		
F7INJ5              	92.11%		
F7HMZ9              	59.65%		
F7DJ53              	58.33%		
F7HZ37              	52.19%		
F7I273              	42.98%		
F6VJW4              	39.47%		
Bootstrap support for F7BRV7 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #1120. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:117 P.jiroveci:117

F6PH62              	100.00%		L0P9S6              	100.00%
F7ABP4              	58.66%		
F7I6Q0              	51.58%		
F6PN51              	11.64%		
F6SCS6              	5.40%		
Bootstrap support for F6PH62 as seed ortholog is 100%.
Bootstrap support for L0P9S6 as seed ortholog is 100%.

Group of orthologs #1121. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:51 P.jiroveci:44

F6V759              	100.00%		L0P982              	100.00%
F7BRU6              	65.95%		
F7AE01              	32.10%		
F7H8P8              	26.26%		
H9KXN4              	21.79%		
Bootstrap support for F6V759 as seed ortholog is 90%.
Bootstrap support for L0P982 as seed ortholog is 88%.

Group of orthologs #1122. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:49 P.jiroveci:117

F7E8T4              	100.00%		L0PE76              	100.00%
F7DB55              	52.58%		
F7IJ13              	37.89%		
Bootstrap support for F7E8T4 as seed ortholog is 95%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #1123. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:117 P.jiroveci:117

B0VXH3              	100.00%		L0PCI9              	100.00%
Bootstrap support for B0VXH3 as seed ortholog is 100%.
Bootstrap support for L0PCI9 as seed ortholog is 100%.

Group of orthologs #1124. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:117 P.jiroveci:117

F6PI94              	100.00%		L0PEZ8              	100.00%
Bootstrap support for F6PI94 as seed ortholog is 100%.
Bootstrap support for L0PEZ8 as seed ortholog is 100%.

Group of orthologs #1125. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:117

F7HH53              	100.00%		L0PEV3              	100.00%
Bootstrap support for F7HH53 as seed ortholog is 99%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #1126. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:117 P.jiroveci:117

F7H7Q1              	100.00%		L0PIR4              	100.00%
Bootstrap support for F7H7Q1 as seed ortholog is 100%.
Bootstrap support for L0PIR4 as seed ortholog is 100%.

Group of orthologs #1127. Best score 117 bits
Score difference with first non-orthologous sequence - C.jacchus:117 P.jiroveci:117

F7I858              	100.00%		L0PAK0              	100.00%
Bootstrap support for F7I858 as seed ortholog is 100%.
Bootstrap support for L0PAK0 as seed ortholog is 100%.

Group of orthologs #1128. Best score 116 bits
Score difference with first non-orthologous sequence - C.jacchus:116 P.jiroveci:116

F7DVM7              	100.00%		L0PC89              	100.00%
F7ET60              	23.88%		
Bootstrap support for F7DVM7 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #1129. Best score 116 bits
Score difference with first non-orthologous sequence - C.jacchus:116 P.jiroveci:116

F7DV19              	100.00%		L0PE35              	100.00%
F7G606              	70.19%		
Bootstrap support for F7DV19 as seed ortholog is 100%.
Bootstrap support for L0PE35 as seed ortholog is 100%.

Group of orthologs #1130. Best score 116 bits
Score difference with first non-orthologous sequence - C.jacchus:116 P.jiroveci:116

F7HX35              	100.00%		L0PH83              	100.00%
Bootstrap support for F7HX35 as seed ortholog is 100%.
Bootstrap support for L0PH83 as seed ortholog is 100%.

Group of orthologs #1131. Best score 116 bits
Score difference with first non-orthologous sequence - C.jacchus:116 P.jiroveci:116

F7IEQ4              	100.00%		L0PHQ1              	100.00%
Bootstrap support for F7IEQ4 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #1132. Best score 116 bits
Score difference with first non-orthologous sequence - C.jacchus:21 P.jiroveci:116

Q32QL6              	100.00%		L0PF58              	100.00%
Bootstrap support for Q32QL6 as seed ortholog is 77%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #1133. Best score 115 bits
Score difference with first non-orthologous sequence - C.jacchus:115 P.jiroveci:115

F6Y7S0              	100.00%		L0PHM1              	100.00%
Bootstrap support for F6Y7S0 as seed ortholog is 100%.
Bootstrap support for L0PHM1 as seed ortholog is 100%.

Group of orthologs #1134. Best score 115 bits
Score difference with first non-orthologous sequence - C.jacchus:115 P.jiroveci:115

F7F9L9              	100.00%		L0PAS5              	100.00%
Bootstrap support for F7F9L9 as seed ortholog is 100%.
Bootstrap support for L0PAS5 as seed ortholog is 100%.

Group of orthologs #1135. Best score 115 bits
Score difference with first non-orthologous sequence - C.jacchus:115 P.jiroveci:115

F7HTR0              	100.00%		L0PF45              	100.00%
Bootstrap support for F7HTR0 as seed ortholog is 100%.
Bootstrap support for L0PF45 as seed ortholog is 100%.

Group of orthologs #1136. Best score 115 bits
Score difference with first non-orthologous sequence - C.jacchus:115 P.jiroveci:115

F7I617              	100.00%		L0PGF4              	100.00%
Bootstrap support for F7I617 as seed ortholog is 100%.
Bootstrap support for L0PGF4 as seed ortholog is 100%.

Group of orthologs #1137. Best score 114 bits
Score difference with first non-orthologous sequence - C.jacchus:114 P.jiroveci:114

B0KWW1              	100.00%		L0PEW9              	100.00%
F6S1N8              	72.02%		
F7DDU0              	71.47%		
Bootstrap support for B0KWW1 as seed ortholog is 100%.
Bootstrap support for L0PEW9 as seed ortholog is 100%.

Group of orthologs #1138. Best score 114 bits
Score difference with first non-orthologous sequence - C.jacchus:114 P.jiroveci:114

F7GN70              	100.00%		L0PGB6              	100.00%
                    	       		L0PG66              	85.25%
Bootstrap support for F7GN70 as seed ortholog is 100%.
Bootstrap support for L0PGB6 as seed ortholog is 100%.

Group of orthologs #1139. Best score 114 bits
Score difference with first non-orthologous sequence - C.jacchus:7 P.jiroveci:114

F7IQA4              	100.00%		L0PF05              	100.00%
Bootstrap support for F7IQA4 as seed ortholog is 41%.
Alternative seed ortholog is F7HI33 (7 bits away from this cluster)
Bootstrap support for L0PF05 as seed ortholog is 100%.

Group of orthologs #1140. Best score 113 bits
Score difference with first non-orthologous sequence - C.jacchus:113 P.jiroveci:113

F7GPF7              	100.00%		L0P7N9              	100.00%
F7I0K9              	73.58%		
Bootstrap support for F7GPF7 as seed ortholog is 100%.
Bootstrap support for L0P7N9 as seed ortholog is 100%.

Group of orthologs #1141. Best score 113 bits
Score difference with first non-orthologous sequence - C.jacchus:113 P.jiroveci:113

F6VVC0              	100.00%		L0PFK4              	100.00%
Bootstrap support for F6VVC0 as seed ortholog is 100%.
Bootstrap support for L0PFK4 as seed ortholog is 100%.

Group of orthologs #1142. Best score 113 bits
Score difference with first non-orthologous sequence - C.jacchus:48 P.jiroveci:113

F6WLI4              	100.00%		L0PIQ9              	100.00%
Bootstrap support for F6WLI4 as seed ortholog is 86%.
Bootstrap support for L0PIQ9 as seed ortholog is 100%.

Group of orthologs #1143. Best score 113 bits
Score difference with first non-orthologous sequence - C.jacchus:113 P.jiroveci:113

F7CQM9              	100.00%		L0PA59              	100.00%
Bootstrap support for F7CQM9 as seed ortholog is 100%.
Bootstrap support for L0PA59 as seed ortholog is 100%.

Group of orthologs #1144. Best score 113 bits
Score difference with first non-orthologous sequence - C.jacchus:113 P.jiroveci:113

F7GRG4              	100.00%		L0P935              	100.00%
Bootstrap support for F7GRG4 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #1145. Best score 113 bits
Score difference with first non-orthologous sequence - C.jacchus:10 P.jiroveci:113

F7HVP1              	100.00%		L0P984              	100.00%
Bootstrap support for F7HVP1 as seed ortholog is 59%.
Alternative seed ortholog is F7HWR4 (10 bits away from this cluster)
Bootstrap support for L0P984 as seed ortholog is 100%.

Group of orthologs #1146. Best score 112 bits
Score difference with first non-orthologous sequence - C.jacchus:112 P.jiroveci:112

F6SS35              	100.00%		L0PFV9              	100.00%
F7HD84              	18.03%		
H9KXF1              	15.33%		
Bootstrap support for F6SS35 as seed ortholog is 100%.
Bootstrap support for L0PFV9 as seed ortholog is 100%.

Group of orthologs #1147. Best score 112 bits
Score difference with first non-orthologous sequence - C.jacchus:112 P.jiroveci:112

F7HZN0              	100.00%		L0PCZ2              	100.00%
F7GTH0              	37.29%		
Bootstrap support for F7HZN0 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #1148. Best score 112 bits
Score difference with first non-orthologous sequence - C.jacchus:112 P.jiroveci:112

F7GIF7              	100.00%		L0P997              	100.00%
Bootstrap support for F7GIF7 as seed ortholog is 100%.
Bootstrap support for L0P997 as seed ortholog is 100%.

Group of orthologs #1149. Best score 111 bits
Score difference with first non-orthologous sequence - C.jacchus:55 P.jiroveci:39

F7F7P4              	100.00%		L0PFG2              	100.00%
F7I590              	96.49%		
F7GGX8              	16.37%		
Bootstrap support for F7F7P4 as seed ortholog is 95%.
Bootstrap support for L0PFG2 as seed ortholog is 91%.

Group of orthologs #1150. Best score 111 bits
Score difference with first non-orthologous sequence - C.jacchus:111 P.jiroveci:111

F7IH84              	100.00%		L0PCC2              	100.00%
Bootstrap support for F7IH84 as seed ortholog is 100%.
Bootstrap support for L0PCC2 as seed ortholog is 100%.

Group of orthologs #1151. Best score 110 bits
Score difference with first non-orthologous sequence - C.jacchus:110 P.jiroveci:110

F6VPC6              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	81.31%
Bootstrap support for F6VPC6 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.

Group of orthologs #1152. Best score 110 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:110

F7CZW0              	100.00%		L0PEE1              	100.00%
F7GDB1              	75.68%		
Bootstrap support for F7CZW0 as seed ortholog is 99%.
Bootstrap support for L0PEE1 as seed ortholog is 100%.

Group of orthologs #1153. Best score 110 bits
Score difference with first non-orthologous sequence - C.jacchus:110 P.jiroveci:110

F7IHX3              	100.00%		L0PF86              	100.00%
                    	       		L0PC10              	85.28%
Bootstrap support for F7IHX3 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #1154. Best score 110 bits
Score difference with first non-orthologous sequence - C.jacchus:110 P.jiroveci:110

F7DW43              	100.00%		L0P6R0              	100.00%
Bootstrap support for F7DW43 as seed ortholog is 100%.
Bootstrap support for L0P6R0 as seed ortholog is 100%.

Group of orthologs #1155. Best score 110 bits
Score difference with first non-orthologous sequence - C.jacchus:110 P.jiroveci:110

F7FN68              	100.00%		L0PFF4              	100.00%
Bootstrap support for F7FN68 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #1156. Best score 110 bits
Score difference with first non-orthologous sequence - C.jacchus:110 P.jiroveci:110

F7I226              	100.00%		L0PGR9              	100.00%
Bootstrap support for F7I226 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #1157. Best score 109 bits
Score difference with first non-orthologous sequence - C.jacchus:109 P.jiroveci:109

F6PTY0              	100.00%		L0PFG4              	100.00%
                    	       		L0P939              	37.26%
Bootstrap support for F6PTY0 as seed ortholog is 100%.
Bootstrap support for L0PFG4 as seed ortholog is 100%.

Group of orthologs #1158. Best score 109 bits
Score difference with first non-orthologous sequence - C.jacchus:63 P.jiroveci:109

F6XMX7              	100.00%		L0P990              	100.00%
F6SNN9              	50.89%		
Bootstrap support for F6XMX7 as seed ortholog is 99%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #1159. Best score 109 bits
Score difference with first non-orthologous sequence - C.jacchus:28 P.jiroveci:109

F7EYB4              	100.00%		L0P8J9              	100.00%
F6TQL6              	40.21%		
Bootstrap support for F7EYB4 as seed ortholog is 76%.
Bootstrap support for L0P8J9 as seed ortholog is 100%.

Group of orthologs #1160. Best score 109 bits
Score difference with first non-orthologous sequence - C.jacchus:109 P.jiroveci:109

F7HKX1              	100.00%		L0PFG8              	100.00%
Bootstrap support for F7HKX1 as seed ortholog is 100%.
Bootstrap support for L0PFG8 as seed ortholog is 100%.

Group of orthologs #1161. Best score 109 bits
Score difference with first non-orthologous sequence - C.jacchus:109 P.jiroveci:109

F7IRW6              	100.00%		L0PCT2              	100.00%
Bootstrap support for F7IRW6 as seed ortholog is 100%.
Bootstrap support for L0PCT2 as seed ortholog is 100%.

Group of orthologs #1162. Best score 108 bits
Score difference with first non-orthologous sequence - C.jacchus:108 P.jiroveci:108

F7HT83              	100.00%		L0PD09              	100.00%
F7HWE5              	35.56%		
F7C8M4              	18.39%		
F7ECM7              	17.57%		
F7DMA3              	16.49%		
F6U4G6              	15.67%		
F7H1E8              	13.62%		
F7AIN6              	13.08%		
F6SCZ2              	12.94%		
F7I1Y6              	11.58%		
F7H8P6              	9.26%		
F6QIZ0              	7.22%		
Bootstrap support for F7HT83 as seed ortholog is 100%.
Bootstrap support for L0PD09 as seed ortholog is 100%.

Group of orthologs #1163. Best score 108 bits
Score difference with first non-orthologous sequence - C.jacchus:108 P.jiroveci:108

F7HPG5              	100.00%		L0PBU9              	100.00%
F7HJV8              	47.09%		
Bootstrap support for F7HPG5 as seed ortholog is 100%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #1164. Best score 108 bits
Score difference with first non-orthologous sequence - C.jacchus:108 P.jiroveci:108

F6S4W4              	100.00%		L0PCZ0              	100.00%
Bootstrap support for F6S4W4 as seed ortholog is 100%.
Bootstrap support for L0PCZ0 as seed ortholog is 100%.

Group of orthologs #1165. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:48 P.jiroveci:33

F7IBQ4              	100.00%		L0PBE1              	100.00%
F7HDB1              	93.09%		
F7IJT9              	91.46%		
H9KYD0              	69.11%		
H9KYL2              	63.82%		
F6RA89              	30.49%		
F7DUQ9              	30.08%		
F6WRL6              	28.46%		
F7I7K4              	25.61%		
F7EVU6              	20.33%		
Bootstrap support for F7IBQ4 as seed ortholog is 99%.
Bootstrap support for L0PBE1 as seed ortholog is 93%.

Group of orthologs #1166. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:107

F6Z4V9              	100.00%		L0PBQ7              	100.00%
F7IJH5              	81.88%		
F7IFF9              	53.02%		
F7I2K7              	52.35%		
F6S532              	24.16%		
F7HAX7              	10.29%		
F7H2A2              	6.94%		
Bootstrap support for F6Z4V9 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #1167. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:107

F7BB15              	100.00%		L0PB99              	100.00%
F7GHP2              	96.35%		
H9KYM2              	59.38%		
F6QBC1              	37.50%		
Bootstrap support for F7BB15 as seed ortholog is 100%.
Bootstrap support for L0PB99 as seed ortholog is 100%.

Group of orthologs #1168. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:107

F7I4V2              	100.00%		L0P7D7              	100.00%
F7G908              	96.24%		
H9KXR1              	86.02%		
F7IE06              	85.48%		
Bootstrap support for F7I4V2 as seed ortholog is 100%.
Bootstrap support for L0P7D7 as seed ortholog is 100%.

Group of orthologs #1169. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:107

F7HES6              	100.00%		L0PDI9              	100.00%
F7IFQ9              	27.41%		
Bootstrap support for F7HES6 as seed ortholog is 100%.
Bootstrap support for L0PDI9 as seed ortholog is 100%.

Group of orthologs #1170. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:107

F6WM74              	100.00%		L0P8L2              	100.00%
Bootstrap support for F6WM74 as seed ortholog is 100%.
Bootstrap support for L0P8L2 as seed ortholog is 100%.

Group of orthologs #1171. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 P.jiroveci:107

F6WV46              	100.00%		L0P8J6              	100.00%
Bootstrap support for F6WV46 as seed ortholog is 100%.
Bootstrap support for L0P8J6 as seed ortholog is 100%.

Group of orthologs #1172. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:106

F7IJH2              	100.00%		L0P7G9              	100.00%
F7HWL3              	85.84%		
F7HAZ0              	84.93%		
F7IL95              	84.25%		
F6XG11              	67.81%		
F7IJS4              	63.01%		
F6PGR9              	60.50%		
H9KWJ3              	59.36%		
F7F7V5              	57.53%		
F7IGZ1              	55.48%		
F7IBD5              	51.60%		
F7GMR9              	48.86%		
F6YH76              	47.49%		
F7IJB6              	44.52%		
F7ICB8              	17.81%		
F6XEE8              	14.61%		
Bootstrap support for F7IJH2 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #1173. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:106

F6TET8              	100.00%		L0PAT2              	100.00%
F6S6R9              	53.39%		
Bootstrap support for F6TET8 as seed ortholog is 100%.
Bootstrap support for L0PAT2 as seed ortholog is 100%.

Group of orthologs #1174. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:41 P.jiroveci:106

F6PTE1              	100.00%		L0P7N2              	100.00%
Bootstrap support for F6PTE1 as seed ortholog is 99%.
Bootstrap support for L0P7N2 as seed ortholog is 100%.

Group of orthologs #1175. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:106

F6Z181              	100.00%		L0PGS9              	100.00%
Bootstrap support for F6Z181 as seed ortholog is 100%.
Bootstrap support for L0PGS9 as seed ortholog is 100%.

Group of orthologs #1176. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:106

F7DJ05              	100.00%		L0PFW3              	100.00%
Bootstrap support for F7DJ05 as seed ortholog is 100%.
Bootstrap support for L0PFW3 as seed ortholog is 100%.

Group of orthologs #1177. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:106

F7II73              	100.00%		L0PBA3              	100.00%
Bootstrap support for F7II73 as seed ortholog is 100%.
Bootstrap support for L0PBA3 as seed ortholog is 100%.

Group of orthologs #1178. Best score 106 bits
Score difference with first non-orthologous sequence - C.jacchus:106 P.jiroveci:106

F7IE09              	100.00%		L0PF95              	100.00%
Bootstrap support for F7IE09 as seed ortholog is 100%.
Bootstrap support for L0PF95 as seed ortholog is 100%.

Group of orthologs #1179. Best score 105 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:105

F7HP70              	100.00%		L0PF90              	100.00%
F7G752              	49.84%		
F6QJ90              	49.76%		
Bootstrap support for F7HP70 as seed ortholog is 100%.
Bootstrap support for L0PF90 as seed ortholog is 100%.

Group of orthologs #1180. Best score 105 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:105

F7HPY8              	100.00%		L0PDN3              	100.00%
F7EQW1              	32.60%		
Bootstrap support for F7HPY8 as seed ortholog is 100%.
Bootstrap support for L0PDN3 as seed ortholog is 100%.

Group of orthologs #1181. Best score 105 bits
Score difference with first non-orthologous sequence - C.jacchus:105 P.jiroveci:105

F7GTP6              	100.00%		L0PAM7              	100.00%
Bootstrap support for F7GTP6 as seed ortholog is 100%.
Bootstrap support for L0PAM7 as seed ortholog is 100%.

Group of orthologs #1182. Best score 104 bits
Score difference with first non-orthologous sequence - C.jacchus:23 P.jiroveci:104

F7I0G7              	100.00%		L0PDW3              	100.00%
F7HZR8              	55.62%		
F7AFW4              	53.19%		
F7I3D4              	51.06%		
Bootstrap support for F7I0G7 as seed ortholog is 81%.
Bootstrap support for L0PDW3 as seed ortholog is 100%.

Group of orthologs #1183. Best score 104 bits
Score difference with first non-orthologous sequence - C.jacchus:104 P.jiroveci:104

F7GL10              	100.00%		L0PDI3              	100.00%
Bootstrap support for F7GL10 as seed ortholog is 100%.
Bootstrap support for L0PDI3 as seed ortholog is 100%.

Group of orthologs #1184. Best score 104 bits
Score difference with first non-orthologous sequence - C.jacchus:104 P.jiroveci:104

F7H7M1              	100.00%		L0PCV9              	100.00%
Bootstrap support for F7H7M1 as seed ortholog is 100%.
Bootstrap support for L0PCV9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 104 bits
Score difference with first non-orthologous sequence - C.jacchus:104 P.jiroveci:104

F7IIM0              	100.00%		L0PDM8              	100.00%
Bootstrap support for F7IIM0 as seed ortholog is 100%.
Bootstrap support for L0PDM8 as seed ortholog is 100%.

Group of orthologs #1186. Best score 103 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:103

F7HRW8              	100.00%		L0PG04              	100.00%
F6Z9I8              	24.59%		
F6ZAB1              	22.72%		
F7I021              	20.37%		
Bootstrap support for F7HRW8 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #1187. Best score 103 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:103

F7ITD8              	100.00%		L0PD85              	100.00%
                    	       		L0PGV7              	61.89%
Bootstrap support for F7ITD8 as seed ortholog is 100%.
Bootstrap support for L0PD85 as seed ortholog is 100%.

Group of orthologs #1188. Best score 103 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:103

F6R108              	100.00%		L0PD86              	100.00%
Bootstrap support for F6R108 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #1189. Best score 103 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:103

F7BGD0              	100.00%		L0PEL9              	100.00%
Bootstrap support for F7BGD0 as seed ortholog is 100%.
Bootstrap support for L0PEL9 as seed ortholog is 100%.

Group of orthologs #1190. Best score 103 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:103

F7HZG4              	100.00%		L0P9T1              	100.00%
Bootstrap support for F7HZG4 as seed ortholog is 100%.
Bootstrap support for L0P9T1 as seed ortholog is 100%.

Group of orthologs #1191. Best score 103 bits
Score difference with first non-orthologous sequence - C.jacchus:103 P.jiroveci:103

F7IDE7              	100.00%		L0PCN2              	100.00%
Bootstrap support for F7IDE7 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #1192. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:102

F6Z0Y9              	100.00%		L0P9H0              	100.00%
F7HV79              	90.48%		
F7GPD3              	85.71%		
F7HAM2              	53.97%		
F7HF08              	28.57%		
F7B146              	25.40%		
Bootstrap support for F6Z0Y9 as seed ortholog is 100%.
Bootstrap support for L0P9H0 as seed ortholog is 100%.

Group of orthologs #1193. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:102

F7F285              	100.00%		L0P9Z6              	100.00%
F7F9Y9              	100.00%		
F7HAK6              	71.26%		
F7FA16              	51.72%		
F7HA73              	17.07%		
Bootstrap support for F7F285 as seed ortholog is 100%.
Bootstrap support for F7F9Y9 as seed ortholog is 100%.
Bootstrap support for L0P9Z6 as seed ortholog is 100%.

Group of orthologs #1194. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:102

F7B398              	100.00%		L0PC19              	100.00%
F7AIY8              	88.83%		
H9KW57              	69.71%		
F7ISJ0              	22.17%		
Bootstrap support for F7B398 as seed ortholog is 100%.
Bootstrap support for L0PC19 as seed ortholog is 100%.

Group of orthologs #1195. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:30 P.jiroveci:102

Q9BDJ3              	100.00%		L0P9W7              	100.00%
F7G6L6              	84.48%		
F6YVA9              	63.79%		
F6S2N6              	6.03%		
Bootstrap support for Q9BDJ3 as seed ortholog is 90%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #1196. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:102

F7IRR7              	100.00%		L0P9F1              	100.00%
F7ECR1              	55.14%		
F7IQZ6              	47.66%		
Bootstrap support for F7IRR7 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #1197. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:22 P.jiroveci:102

F7HXD9              	100.00%		L0PCM4              	100.00%
F7EAU7              	44.38%		
Bootstrap support for F7HXD9 as seed ortholog is 85%.
Bootstrap support for L0PCM4 as seed ortholog is 100%.

Group of orthologs #1198. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:102

F7FRP3              	100.00%		L0PCX8              	100.00%
Bootstrap support for F7FRP3 as seed ortholog is 100%.
Bootstrap support for L0PCX8 as seed ortholog is 100%.

Group of orthologs #1199. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 P.jiroveci:102

F7GXN5              	100.00%		L0PDW8              	100.00%
Bootstrap support for F7GXN5 as seed ortholog is 100%.
Bootstrap support for L0PDW8 as seed ortholog is 100%.

Group of orthologs #1200. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F7I9Z7              	100.00%		L0PB92              	100.00%
F7IG56              	20.29%		
F7GAI1              	19.81%		
Bootstrap support for F7I9Z7 as seed ortholog is 100%.
Bootstrap support for L0PB92 as seed ortholog is 100%.

Group of orthologs #1201. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F6QXI9              	100.00%		L0P7T7              	100.00%
Bootstrap support for F6QXI9 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #1202. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F6Z9F1              	100.00%		L0PF53              	100.00%
Bootstrap support for F6Z9F1 as seed ortholog is 100%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #1203. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:14 P.jiroveci:101

F7F7M2              	100.00%		L0PAF2              	100.00%
Bootstrap support for F7F7M2 as seed ortholog is 65%.
Alternative seed ortholog is F6R0A6 (14 bits away from this cluster)
Bootstrap support for L0PAF2 as seed ortholog is 100%.

Group of orthologs #1204. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F7GRR4              	100.00%		L0P8Q1              	100.00%
Bootstrap support for F7GRR4 as seed ortholog is 100%.
Bootstrap support for L0P8Q1 as seed ortholog is 100%.

Group of orthologs #1205. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F7H6B4              	100.00%		L0PGP3              	100.00%
Bootstrap support for F7H6B4 as seed ortholog is 100%.
Bootstrap support for L0PGP3 as seed ortholog is 100%.

Group of orthologs #1206. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F7IDR5              	100.00%		L0P7Q2              	100.00%
Bootstrap support for F7IDR5 as seed ortholog is 100%.
Bootstrap support for L0P7Q2 as seed ortholog is 100%.

Group of orthologs #1207. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:101 P.jiroveci:101

F7IC64              	100.00%		L0P9R5              	100.00%
Bootstrap support for F7IC64 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #1208. Best score 101 bits
Score difference with first non-orthologous sequence - C.jacchus:52 P.jiroveci:101

F7I710              	100.00%		L0PE10              	100.00%
Bootstrap support for F7I710 as seed ortholog is 96%.
Bootstrap support for L0PE10 as seed ortholog is 100%.

Group of orthologs #1209. Best score 100 bits
Score difference with first non-orthologous sequence - C.jacchus:100 P.jiroveci:100

F7AR43              	100.00%		L0PFZ7              	100.00%
F7BHG7              	51.39%		
Bootstrap support for F7AR43 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #1210. Best score 100 bits
Score difference with first non-orthologous sequence - C.jacchus:23 P.jiroveci:100

F7AMS8              	100.00%		L0P9W5              	100.00%
Bootstrap support for F7AMS8 as seed ortholog is 68%.
Alternative seed ortholog is F6X8V8 (23 bits away from this cluster)
Bootstrap support for L0P9W5 as seed ortholog is 100%.

Group of orthologs #1211. Best score 100 bits
Score difference with first non-orthologous sequence - C.jacchus:41 P.jiroveci:100

F7DLJ3              	100.00%		L0PE14              	100.00%
Bootstrap support for F7DLJ3 as seed ortholog is 99%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #1212. Best score 100 bits
Score difference with first non-orthologous sequence - C.jacchus:31 P.jiroveci:100

F7HQW0              	100.00%		L0PDF0              	100.00%
Bootstrap support for F7HQW0 as seed ortholog is 82%.
Bootstrap support for L0PDF0 as seed ortholog is 100%.

Group of orthologs #1213. Best score 100 bits
Score difference with first non-orthologous sequence - C.jacchus:100 P.jiroveci:100

F7HYU4              	100.00%		L0PBX4              	100.00%
Bootstrap support for F7HYU4 as seed ortholog is 100%.
Bootstrap support for L0PBX4 as seed ortholog is 100%.

Group of orthologs #1214. Best score 100 bits
Score difference with first non-orthologous sequence - C.jacchus:100 P.jiroveci:100

F7IIW3              	100.00%		L0PD96              	100.00%
Bootstrap support for F7IIW3 as seed ortholog is 100%.
Bootstrap support for L0PD96 as seed ortholog is 100%.

Group of orthologs #1215. Best score 99 bits
Score difference with first non-orthologous sequence - C.jacchus:99 P.jiroveci:99

F7HLG2              	100.00%		L0PCQ4              	100.00%
F7G771              	99.25%		
F7DWZ4              	89.47%		
F7F3B9              	76.69%		
F7GU73              	65.41%		
F7HAY6              	30.83%		
Bootstrap support for F7HLG2 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #1216. Best score 99 bits
Score difference with first non-orthologous sequence - C.jacchus:47 P.jiroveci:99

F7E4Z3              	100.00%		L0P9U7              	100.00%
Bootstrap support for F7E4Z3 as seed ortholog is 92%.
Bootstrap support for L0P9U7 as seed ortholog is 100%.

Group of orthologs #1217. Best score 98 bits
Score difference with first non-orthologous sequence - C.jacchus:98 P.jiroveci:98

F7IHJ6              	100.00%		L0PC01              	100.00%
F7C8M8              	46.31%		
F7IS35              	14.94%		
Bootstrap support for F7IHJ6 as seed ortholog is 100%.
Bootstrap support for L0PC01 as seed ortholog is 100%.

Group of orthologs #1218. Best score 98 bits
Score difference with first non-orthologous sequence - C.jacchus:98 P.jiroveci:98

F7H807              	100.00%		L0PEA3              	100.00%
Bootstrap support for F7H807 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #1219. Best score 98 bits
Score difference with first non-orthologous sequence - C.jacchus:98 P.jiroveci:98

F7HY39              	100.00%		L0PE32              	100.00%
Bootstrap support for F7HY39 as seed ortholog is 100%.
Bootstrap support for L0PE32 as seed ortholog is 100%.

Group of orthologs #1220. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:14 P.jiroveci:97

F7IS61              	100.00%		L0P9X1              	100.00%
F7HV08              	7.72%		
F7GVV3              	5.83%		
Bootstrap support for F7IS61 as seed ortholog is 62%.
Alternative seed ortholog is F7HZP9 (14 bits away from this cluster)
Bootstrap support for L0P9X1 as seed ortholog is 100%.

Group of orthologs #1221. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:97

F6U0R0              	100.00%		L0PB42              	100.00%
F7DCG5              	64.35%		
Bootstrap support for F6U0R0 as seed ortholog is 100%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #1222. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:97

F7GRB3              	100.00%		L0PEP8              	100.00%
F7FNL6              	87.99%		
Bootstrap support for F7GRB3 as seed ortholog is 100%.
Bootstrap support for L0PEP8 as seed ortholog is 100%.

Group of orthologs #1223. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:97

F7IMF2              	100.00%		L0P7W8              	100.00%
                    	       		L0P8R2              	100.00%
Bootstrap support for F7IMF2 as seed ortholog is 100%.
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.

Group of orthologs #1224. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:50 P.jiroveci:97

F7DW70              	100.00%		L0P9D5              	100.00%
Bootstrap support for F7DW70 as seed ortholog is 91%.
Bootstrap support for L0P9D5 as seed ortholog is 100%.

Group of orthologs #1225. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:97

F7EN65              	100.00%		L0PAV4              	100.00%
Bootstrap support for F7EN65 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #1226. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 P.jiroveci:97

F7GRE4              	100.00%		L0P868              	100.00%
Bootstrap support for F7GRE4 as seed ortholog is 100%.
Bootstrap support for L0P868 as seed ortholog is 100%.

Group of orthologs #1227. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 P.jiroveci:96

F6SBJ5              	100.00%		L0PI42              	100.00%
F7IQT9              	84.30%		
F6PMT3              	74.71%		
Bootstrap support for F6SBJ5 as seed ortholog is 100%.
Bootstrap support for L0PI42 as seed ortholog is 100%.

Group of orthologs #1228. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:42 P.jiroveci:96

F6UZL4              	100.00%		L0PFA1              	100.00%
F7BPP4              	41.67%		
Bootstrap support for F6UZL4 as seed ortholog is 99%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #1229. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 P.jiroveci:96

F6ZIE3              	100.00%		L0P9D3              	100.00%
                    	       		L0P7B2              	60.34%
Bootstrap support for F6ZIE3 as seed ortholog is 100%.
Bootstrap support for L0P9D3 as seed ortholog is 100%.

Group of orthologs #1230. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 P.jiroveci:96

F7CEM6              	100.00%		L0PG13              	100.00%
F7DX01              	81.06%		
Bootstrap support for F7CEM6 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #1231. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 P.jiroveci:96

F7ILD9              	100.00%		L0P806              	100.00%
F7HPL2              	69.84%		
Bootstrap support for F7ILD9 as seed ortholog is 100%.
Bootstrap support for L0P806 as seed ortholog is 100%.

Group of orthologs #1232. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:40 P.jiroveci:96

F6TRS0              	100.00%		L0PFQ6              	100.00%
Bootstrap support for F6TRS0 as seed ortholog is 89%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #1233. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 P.jiroveci:96

F7FQ80              	100.00%		L0PF64              	100.00%
Bootstrap support for F7FQ80 as seed ortholog is 100%.
Bootstrap support for L0PF64 as seed ortholog is 100%.

Group of orthologs #1234. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 P.jiroveci:96

F7IS86              	100.00%		L0PEX4              	100.00%
Bootstrap support for F7IS86 as seed ortholog is 100%.
Bootstrap support for L0PEX4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 95 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:95

F6TRQ9              	100.00%		L0PCX7              	100.00%
Bootstrap support for F6TRQ9 as seed ortholog is 100%.
Bootstrap support for L0PCX7 as seed ortholog is 100%.

Group of orthologs #1236. Best score 95 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:95

F7H561              	100.00%		L0PBK0              	100.00%
Bootstrap support for F7H561 as seed ortholog is 100%.
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #1237. Best score 95 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:95

F7I8T7              	100.00%		L0PHI8              	100.00%
Bootstrap support for F7I8T7 as seed ortholog is 100%.
Bootstrap support for L0PHI8 as seed ortholog is 100%.

Group of orthologs #1238. Best score 95 bits
Score difference with first non-orthologous sequence - C.jacchus:95 P.jiroveci:95

F7ISJ9              	100.00%		L0PBX3              	100.00%
Bootstrap support for F7ISJ9 as seed ortholog is 100%.
Bootstrap support for L0PBX3 as seed ortholog is 100%.

Group of orthologs #1239. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F6UIJ1              	100.00%		L0PDQ8              	100.00%
F7C1R4              	100.00%		
H9KY50              	100.00%		
F7HV22              	87.68%		
F7FSZ1              	57.97%		
Bootstrap support for F6UIJ1 as seed ortholog is 100%.
Bootstrap support for F7C1R4 as seed ortholog is 100%.
Bootstrap support for H9KY50 as seed ortholog is 100%.
Bootstrap support for L0PDQ8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F6UZE5              	100.00%		L0PF82              	100.00%
Bootstrap support for F6UZE5 as seed ortholog is 100%.
Bootstrap support for L0PF82 as seed ortholog is 100%.

Group of orthologs #1241. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F7CEE3              	100.00%		L0PCF7              	100.00%
Bootstrap support for F7CEE3 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #1242. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:47 P.jiroveci:94

F7CTS4              	100.00%		L0PBX5              	100.00%
Bootstrap support for F7CTS4 as seed ortholog is 98%.
Bootstrap support for L0PBX5 as seed ortholog is 100%.

Group of orthologs #1243. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F7GMH8              	100.00%		L0P8Z4              	100.00%
Bootstrap support for F7GMH8 as seed ortholog is 100%.
Bootstrap support for L0P8Z4 as seed ortholog is 100%.

Group of orthologs #1244. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F7HKC4              	100.00%		L0PBZ3              	100.00%
Bootstrap support for F7HKC4 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F7HZ47              	100.00%		L0PAW5              	100.00%
Bootstrap support for F7HZ47 as seed ortholog is 100%.
Bootstrap support for L0PAW5 as seed ortholog is 100%.

Group of orthologs #1246. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 P.jiroveci:94

F7ILY2              	100.00%		L0P8A1              	100.00%
Bootstrap support for F7ILY2 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 100%.

Group of orthologs #1247. Best score 93 bits
Score difference with first non-orthologous sequence - C.jacchus:93 P.jiroveci:93

F6PM88              	100.00%		L0PDY4              	100.00%
F6UMB0              	44.29%		
F7ED66              	10.06%		
Bootstrap support for F6PM88 as seed ortholog is 100%.
Bootstrap support for L0PDY4 as seed ortholog is 100%.

Group of orthologs #1248. Best score 93 bits
Score difference with first non-orthologous sequence - C.jacchus:93 P.jiroveci:93

F6WUM8              	100.00%		L0PHH5              	100.00%
F7I9U5              	22.49%		
Bootstrap support for F6WUM8 as seed ortholog is 100%.
Bootstrap support for L0PHH5 as seed ortholog is 100%.

Group of orthologs #1249. Best score 93 bits
Score difference with first non-orthologous sequence - C.jacchus:93 P.jiroveci:93

F7I2Z0              	100.00%		L0PHZ2              	100.00%
F7EYP5              	56.49%		
Bootstrap support for F7I2Z0 as seed ortholog is 100%.
Bootstrap support for L0PHZ2 as seed ortholog is 100%.

Group of orthologs #1250. Best score 93 bits
Score difference with first non-orthologous sequence - C.jacchus:93 P.jiroveci:93

F7FK29              	100.00%		L0PB06              	100.00%
Bootstrap support for F7FK29 as seed ortholog is 100%.
Bootstrap support for L0PB06 as seed ortholog is 100%.

Group of orthologs #1251. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7EQH4              	100.00%		L0PA80              	100.00%
F6ULC1              	78.91%		
F6VJU8              	47.62%		
Bootstrap support for F7EQH4 as seed ortholog is 100%.
Bootstrap support for L0PA80 as seed ortholog is 100%.

Group of orthologs #1252. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7I6Z0              	100.00%		L0PFB0              	100.00%
F6R0N4              	44.50%		
F6X2E4              	40.25%		
Bootstrap support for F7I6Z0 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #1253. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7IH53              	100.00%		L0PFT5              	100.00%
F7I6X4              	99.02%		
F7HB74              	75.85%		
Bootstrap support for F7IH53 as seed ortholog is 100%.
Bootstrap support for L0PFT5 as seed ortholog is 100%.

Group of orthologs #1254. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7H8K3              	100.00%		L0PEF8              	100.00%
F7IDE8              	100.00%		
Bootstrap support for F7H8K3 as seed ortholog is 100%.
Bootstrap support for F7IDE8 as seed ortholog is 100%.
Bootstrap support for L0PEF8 as seed ortholog is 100%.

Group of orthologs #1255. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7I8R3              	100.00%		L0PFI5              	100.00%
F7HZC2              	89.14%		
Bootstrap support for F7I8R3 as seed ortholog is 100%.
Bootstrap support for L0PFI5 as seed ortholog is 100%.

Group of orthologs #1256. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:92

F6R598              	100.00%		L0PDY2              	100.00%
Bootstrap support for F6R598 as seed ortholog is 86%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #1257. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7AGZ0              	100.00%		L0PFF2              	100.00%
Bootstrap support for F7AGZ0 as seed ortholog is 100%.
Bootstrap support for L0PFF2 as seed ortholog is 100%.

Group of orthologs #1258. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7EJI6              	100.00%		L0PF35              	100.00%
Bootstrap support for F7EJI6 as seed ortholog is 100%.
Bootstrap support for L0PF35 as seed ortholog is 100%.

Group of orthologs #1259. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7GJH5              	100.00%		L0P995              	100.00%
Bootstrap support for F7GJH5 as seed ortholog is 100%.
Bootstrap support for L0P995 as seed ortholog is 100%.

Group of orthologs #1260. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 P.jiroveci:92

F7HFQ0              	100.00%		L0PD23              	100.00%
Bootstrap support for F7HFQ0 as seed ortholog is 100%.
Bootstrap support for L0PD23 as seed ortholog is 100%.

Group of orthologs #1261. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7I2W3              	100.00%		L0PFK1              	100.00%
F7I827              	94.29%		
F6XD00              	87.14%		
F7ES89              	20.00%		
Bootstrap support for F7I2W3 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #1262. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7IAP1              	100.00%		L0PBD3              	100.00%
F6TF01              	49.53%		
F7IHD4              	39.81%		
Bootstrap support for F7IAP1 as seed ortholog is 100%.
Bootstrap support for L0PBD3 as seed ortholog is 100%.

Group of orthologs #1263. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F6WGR6              	100.00%		L0P847              	100.00%
F6QDN2              	43.51%		
Bootstrap support for F6WGR6 as seed ortholog is 100%.
Bootstrap support for L0P847 as seed ortholog is 100%.

Group of orthologs #1264. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:35 P.jiroveci:91

F7FCS3              	100.00%		L0PFM9              	100.00%
F7CHT2              	20.61%		
Bootstrap support for F7FCS3 as seed ortholog is 94%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #1265. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7GW04              	100.00%		L0PG18              	100.00%
F7IJC6              	61.57%		
Bootstrap support for F7GW04 as seed ortholog is 100%.
Bootstrap support for L0PG18 as seed ortholog is 100%.

Group of orthologs #1266. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7HZD7              	100.00%		L0P8Y9              	100.00%
F7ILX7              	46.61%		
Bootstrap support for F7HZD7 as seed ortholog is 100%.
Bootstrap support for L0P8Y9 as seed ortholog is 100%.

Group of orthologs #1267. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7CDP2              	100.00%		L0PHU9              	100.00%
Bootstrap support for F7CDP2 as seed ortholog is 100%.
Bootstrap support for L0PHU9 as seed ortholog is 100%.

Group of orthologs #1268. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7G7D3              	100.00%		L0PII9              	100.00%
Bootstrap support for F7G7D3 as seed ortholog is 100%.
Bootstrap support for L0PII9 as seed ortholog is 100%.

Group of orthologs #1269. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:91 P.jiroveci:91

F7IGM3              	100.00%		L0PG28              	100.00%
Bootstrap support for F7IGM3 as seed ortholog is 100%.
Bootstrap support for L0PG28 as seed ortholog is 100%.

Group of orthologs #1270. Best score 90 bits
Score difference with first non-orthologous sequence - C.jacchus:90 P.jiroveci:90

F7HV56              	100.00%		L0PDD4              	100.00%
F7IQQ4              	96.43%		
F7IPH3              	65.48%		
F7IM94              	53.57%		
F7ENV4              	48.81%		
F7DV71              	46.43%		
H9KY66              	19.05%		
Bootstrap support for F7HV56 as seed ortholog is 100%.
Bootstrap support for L0PDD4 as seed ortholog is 100%.

Group of orthologs #1271. Best score 90 bits
Score difference with first non-orthologous sequence - C.jacchus:90 P.jiroveci:90

F7HXG2              	100.00%		L0PCQ5              	100.00%
F7H044              	82.81%		
F7H2I0              	51.56%		
Bootstrap support for F7HXG2 as seed ortholog is 100%.
Bootstrap support for L0PCQ5 as seed ortholog is 100%.

Group of orthologs #1272. Best score 90 bits
Score difference with first non-orthologous sequence - C.jacchus:90 P.jiroveci:90

F7FBY5              	100.00%		L0PEX2              	100.00%
F7GV48              	26.56%		
Bootstrap support for F7FBY5 as seed ortholog is 100%.
Bootstrap support for L0PEX2 as seed ortholog is 100%.

Group of orthologs #1273. Best score 90 bits
Score difference with first non-orthologous sequence - C.jacchus:90 P.jiroveci:90

F7F6X9              	100.00%		L0P9A5              	100.00%
Bootstrap support for F7F6X9 as seed ortholog is 100%.
Bootstrap support for L0P9A5 as seed ortholog is 100%.

Group of orthologs #1274. Best score 89 bits
Score difference with first non-orthologous sequence - C.jacchus:89 P.jiroveci:89

F6PGL8              	100.00%		L0PCT7              	100.00%
F7H2Y7              	68.83%		
Bootstrap support for F6PGL8 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #1275. Best score 89 bits
Score difference with first non-orthologous sequence - C.jacchus:35 P.jiroveci:89

F6RAE1              	100.00%		L0PD56              	100.00%
F7GCW8              	25.27%		
Bootstrap support for F6RAE1 as seed ortholog is 85%.
Bootstrap support for L0PD56 as seed ortholog is 100%.

Group of orthologs #1276. Best score 89 bits
Score difference with first non-orthologous sequence - C.jacchus:89 P.jiroveci:89

F7GNV1              	100.00%		L0PEF9              	100.00%
                    	       		L0PG49              	100.00%
Bootstrap support for F7GNV1 as seed ortholog is 100%.
Bootstrap support for L0PEF9 as seed ortholog is 100%.
Bootstrap support for L0PG49 as seed ortholog is 100%.

Group of orthologs #1277. Best score 88 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:88

F6YPR0              	100.00%		L0PA96              	100.00%
F7I706              	44.09%		
Bootstrap support for F6YPR0 as seed ortholog is 100%.
Bootstrap support for L0PA96 as seed ortholog is 100%.

Group of orthologs #1278. Best score 88 bits
Score difference with first non-orthologous sequence - C.jacchus:16 P.jiroveci:88

F6W2F6              	100.00%		L0PAT3              	100.00%
Bootstrap support for F6W2F6 as seed ortholog is 90%.
Bootstrap support for L0PAT3 as seed ortholog is 100%.

Group of orthologs #1279. Best score 88 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:88

F7FNF6              	100.00%		L0PFM0              	100.00%
Bootstrap support for F7FNF6 as seed ortholog is 100%.
Bootstrap support for L0PFM0 as seed ortholog is 100%.

Group of orthologs #1280. Best score 88 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:88

F7HAM6              	100.00%		L0PBA1              	100.00%
Bootstrap support for F7HAM6 as seed ortholog is 100%.
Bootstrap support for L0PBA1 as seed ortholog is 100%.

Group of orthologs #1281. Best score 88 bits
Score difference with first non-orthologous sequence - C.jacchus:88 P.jiroveci:88

F7HF67              	100.00%		L0PCG6              	100.00%
Bootstrap support for F7HF67 as seed ortholog is 100%.
Bootstrap support for L0PCG6 as seed ortholog is 100%.

Group of orthologs #1282. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:87

F7AIV0              	100.00%		L0PEF7              	100.00%
F7DCS8              	100.00%		
F7IIT6              	100.00%		
F7GU77              	98.77%		
F7INH9              	96.32%		
F7HAR2              	92.02%		
Bootstrap support for F7AIV0 as seed ortholog is 100%.
Bootstrap support for F7DCS8 as seed ortholog is 100%.
Bootstrap support for F7IIT6 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #1283. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:21 P.jiroveci:87

F7IBF5              	100.00%		L0P8W8              	100.00%
F7CT80              	5.45%		L0P9K5              	55.79%
Bootstrap support for F7IBF5 as seed ortholog is 77%.
Bootstrap support for L0P8W8 as seed ortholog is 100%.

Group of orthologs #1284. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:87

F7INQ3              	100.00%		L0PFT3              	100.00%
F7HK73              	57.80%		
Bootstrap support for F7INQ3 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #1285. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:87

F7H9P1              	100.00%		L0PDE2              	100.00%
Bootstrap support for F7H9P1 as seed ortholog is 100%.
Bootstrap support for L0PDE2 as seed ortholog is 100%.

Group of orthologs #1286. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:87

F7H2B7              	100.00%		L0PFF3              	100.00%
Bootstrap support for F7H2B7 as seed ortholog is 100%.
Bootstrap support for L0PFF3 as seed ortholog is 100%.

Group of orthologs #1287. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:87 P.jiroveci:19

F7I6I9              	100.00%		L0PAT8              	100.00%
Bootstrap support for F7I6I9 as seed ortholog is 100%.
Bootstrap support for L0PAT8 as seed ortholog is 74%.
Alternative seed ortholog is L0PEV0 (19 bits away from this cluster)

Group of orthologs #1288. Best score 86 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:86

F7I1W2              	100.00%		L0PFU9              	100.00%
F7I4M8              	62.31%		
F7IB46              	56.23%		
Bootstrap support for F7I1W2 as seed ortholog is 92%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #1289. Best score 86 bits
Score difference with first non-orthologous sequence - C.jacchus:86 P.jiroveci:86

F6QCH8              	100.00%		L0P887              	100.00%
F7IC63              	26.54%		
Bootstrap support for F6QCH8 as seed ortholog is 100%.
Bootstrap support for L0P887 as seed ortholog is 100%.

Group of orthologs #1290. Best score 86 bits
Score difference with first non-orthologous sequence - C.jacchus:86 P.jiroveci:86

F7IE22              	100.00%		L0P7T1              	100.00%
F7IFS4              	100.00%		
Bootstrap support for F7IE22 as seed ortholog is 100%.
Bootstrap support for F7IFS4 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #1291. Best score 86 bits
Score difference with first non-orthologous sequence - C.jacchus:86 P.jiroveci:86

F7HMY9              	100.00%		L0PBC9              	100.00%
Bootstrap support for F7HMY9 as seed ortholog is 100%.
Bootstrap support for L0PBC9 as seed ortholog is 100%.

Group of orthologs #1292. Best score 85 bits
Score difference with first non-orthologous sequence - C.jacchus:23 P.jiroveci:85

F6VJF4              	100.00%		L0PCN8              	100.00%
F7I7W6              	48.35%		
F6SFF2              	41.92%		
F7F1C1              	33.91%		
F7I442              	33.05%		
Bootstrap support for F6VJF4 as seed ortholog is 75%.
Bootstrap support for L0PCN8 as seed ortholog is 100%.

Group of orthologs #1293. Best score 85 bits
Score difference with first non-orthologous sequence - C.jacchus:85 P.jiroveci:85

F6PHA6              	100.00%		L0PEI6              	100.00%
Bootstrap support for F6PHA6 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #1294. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:31 P.jiroveci:84

F6Q2W0              	100.00%		L0PG69              	100.00%
F6SSQ9              	76.58%		
F7IDI1              	68.82%		
F7HKA2              	6.05%		
Bootstrap support for F6Q2W0 as seed ortholog is 82%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #1295. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:84 P.jiroveci:84

F7ISE7              	100.00%		L0PDG4              	100.00%
H9KXV8              	100.00%		
F7DII3              	93.42%		
H9KVU3              	5.70%		
Bootstrap support for F7ISE7 as seed ortholog is 100%.
Bootstrap support for H9KXV8 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #1296. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:84 P.jiroveci:84

F7FPQ2              	100.00%		L0PFB5              	100.00%
F7ID14              	14.94%		
F6Y6N6              	9.48%		
Bootstrap support for F7FPQ2 as seed ortholog is 100%.
Bootstrap support for L0PFB5 as seed ortholog is 100%.

Group of orthologs #1297. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:15 P.jiroveci:84

F7IBL1              	100.00%		L0P8G4              	100.00%
F7I256              	16.36%		
Bootstrap support for F7IBL1 as seed ortholog is 84%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #1298. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:11 P.jiroveci:84

F7DC80              	100.00%		L0PA37              	100.00%
Bootstrap support for F7DC80 as seed ortholog is 73%.
Alternative seed ortholog is F7HFZ7 (11 bits away from this cluster)
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #1299. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:84 P.jiroveci:84

F7I545              	100.00%		L0PF93              	100.00%
Bootstrap support for F7I545 as seed ortholog is 100%.
Bootstrap support for L0PF93 as seed ortholog is 100%.

Group of orthologs #1300. Best score 83 bits
Score difference with first non-orthologous sequence - C.jacchus:83 P.jiroveci:83

F7FUB2              	100.00%		L0PAK5              	100.00%
F7HV70              	40.11%		
Bootstrap support for F7FUB2 as seed ortholog is 100%.
Bootstrap support for L0PAK5 as seed ortholog is 100%.

Group of orthologs #1301. Best score 83 bits
Score difference with first non-orthologous sequence - C.jacchus:83 P.jiroveci:83

F6QZV4              	100.00%		L0PD19              	100.00%
Bootstrap support for F6QZV4 as seed ortholog is 100%.
Bootstrap support for L0PD19 as seed ortholog is 100%.

Group of orthologs #1302. Best score 83 bits
Score difference with first non-orthologous sequence - C.jacchus:83 P.jiroveci:83

F7H794              	100.00%		L0PG56              	100.00%
Bootstrap support for F7H794 as seed ortholog is 100%.
Bootstrap support for L0PG56 as seed ortholog is 100%.

Group of orthologs #1303. Best score 83 bits
Score difference with first non-orthologous sequence - C.jacchus:83 P.jiroveci:83

F7IC23              	100.00%		L0P9T8              	100.00%
Bootstrap support for F7IC23 as seed ortholog is 100%.
Bootstrap support for L0P9T8 as seed ortholog is 100%.

Group of orthologs #1304. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7ICW4              	100.00%		L0PBA0              	100.00%
F7GZZ5              	94.79%		
H9KXU3              	75.97%		
F7I744              	44.20%		
Bootstrap support for F7ICW4 as seed ortholog is 100%.
Bootstrap support for L0PBA0 as seed ortholog is 100%.

Group of orthologs #1305. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7HX62              	100.00%		L0PDW2              	100.00%
F7IID9              	28.59%		
Bootstrap support for F7HX62 as seed ortholog is 100%.
Bootstrap support for L0PDW2 as seed ortholog is 100%.

Group of orthologs #1306. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F6W1J8              	100.00%		L0P724              	100.00%
Bootstrap support for F6W1J8 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #1307. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7GHX5              	100.00%		L0PB51              	100.00%
Bootstrap support for F7GHX5 as seed ortholog is 100%.
Bootstrap support for L0PB51 as seed ortholog is 100%.

Group of orthologs #1308. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7GBZ6              	100.00%		L0PEH3              	100.00%
Bootstrap support for F7GBZ6 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #1309. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7ICW3              	100.00%		L0P8B5              	100.00%
Bootstrap support for F7ICW3 as seed ortholog is 100%.
Bootstrap support for L0P8B5 as seed ortholog is 100%.

Group of orthologs #1310. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7ICT4              	100.00%		L0PE40              	100.00%
Bootstrap support for F7ICT4 as seed ortholog is 100%.
Bootstrap support for L0PE40 as seed ortholog is 100%.

Group of orthologs #1311. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 P.jiroveci:82

F7IQE4              	100.00%		L0PE48              	100.00%
Bootstrap support for F7IQE4 as seed ortholog is 100%.
Bootstrap support for L0PE48 as seed ortholog is 100%.

Group of orthologs #1312. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:81 P.jiroveci:81

F7A326              	100.00%		L0PF50              	100.00%
F7HAE2              	100.00%		
Bootstrap support for F7A326 as seed ortholog is 100%.
Bootstrap support for F7HAE2 as seed ortholog is 100%.
Bootstrap support for L0PF50 as seed ortholog is 100%.

Group of orthologs #1313. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:7 P.jiroveci:81

H9KWW5              	100.00%		L0PEL1              	100.00%
F6SAX7              	66.19%		
Bootstrap support for H9KWW5 as seed ortholog is 38%.
Alternative seed ortholog is F7I329 (7 bits away from this cluster)
Bootstrap support for L0PEL1 as seed ortholog is 100%.

Group of orthologs #1314. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:81 P.jiroveci:81

F7H177              	100.00%		L0P7C7              	100.00%
Bootstrap support for F7H177 as seed ortholog is 100%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #1315. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:81 P.jiroveci:81

F7H9P8              	100.00%		L0PC72              	100.00%
Bootstrap support for F7H9P8 as seed ortholog is 100%.
Bootstrap support for L0PC72 as seed ortholog is 100%.

Group of orthologs #1316. Best score 80 bits
Score difference with first non-orthologous sequence - C.jacchus:80 P.jiroveci:80

F7EFU7              	100.00%		L0PGX1              	100.00%
Bootstrap support for F7EFU7 as seed ortholog is 100%.
Bootstrap support for L0PGX1 as seed ortholog is 100%.

Group of orthologs #1317. Best score 80 bits
Score difference with first non-orthologous sequence - C.jacchus:80 P.jiroveci:80

F7GS02              	100.00%		L0PED2              	100.00%
Bootstrap support for F7GS02 as seed ortholog is 100%.
Bootstrap support for L0PED2 as seed ortholog is 100%.

Group of orthologs #1318. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F7HVA8              	100.00%		L0P8Q8              	100.00%
F7IQH8              	17.50%		
F7DB34              	9.09%		
Bootstrap support for F7HVA8 as seed ortholog is 100%.
Bootstrap support for L0P8Q8 as seed ortholog is 100%.

Group of orthologs #1319. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F6YI48              	100.00%		L0PDB5              	100.00%
F6XRJ8              	74.04%		
Bootstrap support for F6YI48 as seed ortholog is 100%.
Bootstrap support for L0PDB5 as seed ortholog is 100%.

Group of orthologs #1320. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F7EMZ4              	100.00%		L0PCB5              	100.00%
H9KWD0              	74.27%		
Bootstrap support for F7EMZ4 as seed ortholog is 100%.
Bootstrap support for L0PCB5 as seed ortholog is 100%.

Group of orthologs #1321. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F7IM64              	100.00%		L0PDS8              	100.00%
F6S6K9              	99.32%		
Bootstrap support for F7IM64 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #1322. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F7DU03              	100.00%		L0P8R9              	100.00%
Bootstrap support for F7DU03 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #1323. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F7HUQ9              	100.00%		L0P8D6              	100.00%
Bootstrap support for F7HUQ9 as seed ortholog is 100%.
Bootstrap support for L0P8D6 as seed ortholog is 100%.

Group of orthologs #1324. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:79 P.jiroveci:79

F7IRG6              	100.00%		L0P9T3              	100.00%
Bootstrap support for F7IRG6 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #1325. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F7E9R1              	100.00%		L0PAD6              	100.00%
F7EW84              	100.00%		
F6Y7S9              	37.02%		
F7DSS5              	21.23%		
Bootstrap support for F7E9R1 as seed ortholog is 100%.
Bootstrap support for F7EW84 as seed ortholog is 100%.
Bootstrap support for L0PAD6 as seed ortholog is 100%.

Group of orthologs #1326. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F7IIA6              	100.00%		L0PEQ9              	100.00%
F7AQT6              	9.12%		
Bootstrap support for F7IIA6 as seed ortholog is 100%.
Bootstrap support for L0PEQ9 as seed ortholog is 100%.

Group of orthologs #1327. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F6PLX7              	100.00%		L0PCX6              	100.00%
Bootstrap support for F6PLX7 as seed ortholog is 100%.
Bootstrap support for L0PCX6 as seed ortholog is 100%.

Group of orthologs #1328. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F6Y0F9              	100.00%		L0PDC5              	100.00%
Bootstrap support for F6Y0F9 as seed ortholog is 100%.
Bootstrap support for L0PDC5 as seed ortholog is 100%.

Group of orthologs #1329. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F7AUU9              	100.00%		L0PEQ6              	100.00%
Bootstrap support for F7AUU9 as seed ortholog is 100%.
Bootstrap support for L0PEQ6 as seed ortholog is 100%.

Group of orthologs #1330. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F7HQK1              	100.00%		L0P883              	100.00%
Bootstrap support for F7HQK1 as seed ortholog is 100%.
Bootstrap support for L0P883 as seed ortholog is 100%.

Group of orthologs #1331. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F7I9K6              	100.00%		L0PCM3              	100.00%
Bootstrap support for F7I9K6 as seed ortholog is 100%.
Bootstrap support for L0PCM3 as seed ortholog is 100%.

Group of orthologs #1332. Best score 78 bits
Score difference with first non-orthologous sequence - C.jacchus:78 P.jiroveci:78

F7IEI4              	100.00%		L0PD90              	100.00%
Bootstrap support for F7IEI4 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #1333. Best score 77 bits
Score difference with first non-orthologous sequence - C.jacchus:77 P.jiroveci:77

F7HZW8              	100.00%		L0PI79              	100.00%
F7AU88              	43.27%		
Bootstrap support for F7HZW8 as seed ortholog is 100%.
Bootstrap support for L0PI79 as seed ortholog is 100%.

Group of orthologs #1334. Best score 77 bits
Score difference with first non-orthologous sequence - C.jacchus:77 P.jiroveci:77

F7IIG9              	100.00%		L0P988              	100.00%
Bootstrap support for F7IIG9 as seed ortholog is 100%.
Bootstrap support for L0P988 as seed ortholog is 100%.

Group of orthologs #1335. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7IN13              	100.00%		L0P7Y0              	100.00%
F6QYP4              	65.44%		
F6RQI1              	16.14%		
F7GV62              	15.85%		
F6T5X1              	15.75%		
F7HAI4              	13.67%		
F6W5B4              	11.68%		
F7C1Q2              	10.81%		
F7HX15              	8.39%		
Bootstrap support for F7IN13 as seed ortholog is 100%.
Bootstrap support for L0P7Y0 as seed ortholog is 100%.

Group of orthologs #1336. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F6T494              	100.00%		L0PD91              	100.00%
F7IQS5              	100.00%		
F6ZUW6              	91.27%		
F7HZV4              	84.13%		
Bootstrap support for F6T494 as seed ortholog is 100%.
Bootstrap support for F7IQS5 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #1337. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F6Y0T2              	100.00%		L0P9K1              	100.00%
F7H0Y0              	74.77%		
Bootstrap support for F6Y0T2 as seed ortholog is 100%.
Bootstrap support for L0P9K1 as seed ortholog is 100%.

Group of orthologs #1338. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7HXZ5              	100.00%		L0PCM5              	100.00%
F7IBL6              	70.80%		
Bootstrap support for F7HXZ5 as seed ortholog is 100%.
Bootstrap support for L0PCM5 as seed ortholog is 100%.

Group of orthologs #1339. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7IBS5              	100.00%		L0PAS9              	100.00%
F7ICE6              	56.30%		
Bootstrap support for F7IBS5 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #1340. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F6STK6              	100.00%		L0P954              	100.00%
Bootstrap support for F6STK6 as seed ortholog is 100%.
Bootstrap support for L0P954 as seed ortholog is 100%.

Group of orthologs #1341. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7BH14              	100.00%		L0PAW3              	100.00%
Bootstrap support for F7BH14 as seed ortholog is 100%.
Bootstrap support for L0PAW3 as seed ortholog is 100%.

Group of orthologs #1342. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7GKN2              	100.00%		L0PEA8              	100.00%
Bootstrap support for F7GKN2 as seed ortholog is 100%.
Bootstrap support for L0PEA8 as seed ortholog is 100%.

Group of orthologs #1343. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7HBU1              	100.00%		L0PFN7              	100.00%
Bootstrap support for F7HBU1 as seed ortholog is 100%.
Bootstrap support for L0PFN7 as seed ortholog is 100%.

Group of orthologs #1344. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 P.jiroveci:76

F7ICC4              	100.00%		L0PEG8              	100.00%
Bootstrap support for F7ICC4 as seed ortholog is 100%.
Bootstrap support for L0PEG8 as seed ortholog is 100%.

Group of orthologs #1345. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:75

F7HQB0              	100.00%		L0PAD3              	100.00%
F7AZ03              	73.48%		
F7I228              	33.48%		
F7ILA6              	32.30%		
F7HAA4              	30.27%		
F7FEY1              	21.07%		
F7B017              	7.38%		
F6ZGZ7              	7.06%		
Bootstrap support for F7HQB0 as seed ortholog is 100%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #1346. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:75

F6WJ88              	100.00%		L0P831              	100.00%
                    	       		L0PDC1              	41.59%
Bootstrap support for F6WJ88 as seed ortholog is 100%.
Bootstrap support for L0P831 as seed ortholog is 100%.

Group of orthologs #1347. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:75

F6SW52              	100.00%		L0PBR0              	100.00%
Bootstrap support for F6SW52 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #1348. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:75

F6TIZ6              	100.00%		L0PIV0              	100.00%
Bootstrap support for F6TIZ6 as seed ortholog is 100%.
Bootstrap support for L0PIV0 as seed ortholog is 100%.

Group of orthologs #1349. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:75

F7IJE4              	100.00%		L0PAV0              	100.00%
Bootstrap support for F7IJE4 as seed ortholog is 100%.
Bootstrap support for L0PAV0 as seed ortholog is 100%.

Group of orthologs #1350. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 P.jiroveci:75

F7IQN6              	100.00%		L0PE73              	100.00%
Bootstrap support for F7IQN6 as seed ortholog is 100%.
Bootstrap support for L0PE73 as seed ortholog is 100%.

Group of orthologs #1351. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7DCR6              	100.00%		L0PA21              	100.00%
F7IG40              	99.12%		
F7DEQ0              	86.34%		
Bootstrap support for F7DCR6 as seed ortholog is 100%.
Bootstrap support for L0PA21 as seed ortholog is 100%.

Group of orthologs #1352. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7DXQ1              	100.00%		L0PCJ4              	100.00%
F7HV77              	26.14%		
F6X6E2              	24.84%		
Bootstrap support for F7DXQ1 as seed ortholog is 100%.
Bootstrap support for L0PCJ4 as seed ortholog is 100%.

Group of orthologs #1353. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7IFI0              	100.00%		L0PAX2              	100.00%
F7II40              	24.60%		
F7I2P0              	5.99%		
Bootstrap support for F7IFI0 as seed ortholog is 100%.
Bootstrap support for L0PAX2 as seed ortholog is 100%.

Group of orthologs #1354. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7FVV3              	100.00%		L0P9X8              	100.00%
F6X768              	8.19%		
Bootstrap support for F7FVV3 as seed ortholog is 100%.
Bootstrap support for L0P9X8 as seed ortholog is 100%.

Group of orthologs #1355. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7BMN8              	100.00%		L0PE66              	100.00%
Bootstrap support for F7BMN8 as seed ortholog is 100%.
Bootstrap support for L0PE66 as seed ortholog is 100%.

Group of orthologs #1356. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7DKU8              	100.00%		L0PCB6              	100.00%
Bootstrap support for F7DKU8 as seed ortholog is 100%.
Bootstrap support for L0PCB6 as seed ortholog is 100%.

Group of orthologs #1357. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7HHH3              	100.00%		L0P7K1              	100.00%
Bootstrap support for F7HHH3 as seed ortholog is 100%.
Bootstrap support for L0P7K1 as seed ortholog is 100%.

Group of orthologs #1358. Best score 74 bits
Score difference with first non-orthologous sequence - C.jacchus:74 P.jiroveci:74

F7HWS3              	100.00%		L0PAF5              	100.00%
Bootstrap support for F7HWS3 as seed ortholog is 100%.
Bootstrap support for L0PAF5 as seed ortholog is 100%.

Group of orthologs #1359. Best score 73 bits
Score difference with first non-orthologous sequence - C.jacchus:73 P.jiroveci:73

F7I0I4              	100.00%		L0P7Y1              	100.00%
Bootstrap support for F7I0I4 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #1360. Best score 73 bits
Score difference with first non-orthologous sequence - C.jacchus:73 P.jiroveci:73

F7HV69              	100.00%		L0PFH8              	100.00%
Bootstrap support for F7HV69 as seed ortholog is 100%.
Bootstrap support for L0PFH8 as seed ortholog is 100%.

Group of orthologs #1361. Best score 73 bits
Score difference with first non-orthologous sequence - C.jacchus:73 P.jiroveci:73

F7HXU8              	100.00%		L0PG35              	100.00%
Bootstrap support for F7HXU8 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #1362. Best score 72 bits
Score difference with first non-orthologous sequence - C.jacchus:72 P.jiroveci:72

F6PGV6              	100.00%		L0P745              	100.00%
Bootstrap support for F6PGV6 as seed ortholog is 100%.
Bootstrap support for L0P745 as seed ortholog is 100%.

Group of orthologs #1363. Best score 72 bits
Score difference with first non-orthologous sequence - C.jacchus:72 P.jiroveci:72

F7AK21              	100.00%		L0PGW3              	100.00%
Bootstrap support for F7AK21 as seed ortholog is 100%.
Bootstrap support for L0PGW3 as seed ortholog is 100%.

Group of orthologs #1364. Best score 72 bits
Score difference with first non-orthologous sequence - C.jacchus:72 P.jiroveci:72

F7G6V2              	100.00%		L0PC50              	100.00%
Bootstrap support for F7G6V2 as seed ortholog is 100%.
Bootstrap support for L0PC50 as seed ortholog is 100%.

Group of orthologs #1365. Best score 71 bits
Score difference with first non-orthologous sequence - C.jacchus:71 P.jiroveci:71

F7GY45              	100.00%		L0PDS7              	100.00%
F7E4M5              	26.20%		
F7F9W8              	24.41%		
F7H7T6              	14.57%		
Bootstrap support for F7GY45 as seed ortholog is 100%.
Bootstrap support for L0PDS7 as seed ortholog is 100%.

Group of orthologs #1366. Best score 71 bits
Score difference with first non-orthologous sequence - C.jacchus:71 P.jiroveci:71

F6TNU3              	100.00%		L0PA11              	100.00%
Bootstrap support for F6TNU3 as seed ortholog is 100%.
Bootstrap support for L0PA11 as seed ortholog is 100%.

Group of orthologs #1367. Best score 71 bits
Score difference with first non-orthologous sequence - C.jacchus:71 P.jiroveci:71

F6UYR8              	100.00%		L0PE38              	100.00%
Bootstrap support for F6UYR8 as seed ortholog is 100%.
Bootstrap support for L0PE38 as seed ortholog is 100%.

Group of orthologs #1368. Best score 71 bits
Score difference with first non-orthologous sequence - C.jacchus:71 P.jiroveci:71

F7FJ65              	100.00%		L0PFF1              	100.00%
Bootstrap support for F7FJ65 as seed ortholog is 100%.
Bootstrap support for L0PFF1 as seed ortholog is 100%.

Group of orthologs #1369. Best score 71 bits
Score difference with first non-orthologous sequence - C.jacchus:71 P.jiroveci:71

F7IQ05              	100.00%		L0P9M2              	100.00%
Bootstrap support for F7IQ05 as seed ortholog is 100%.
Bootstrap support for L0P9M2 as seed ortholog is 100%.

Group of orthologs #1370. Best score 70 bits
Score difference with first non-orthologous sequence - C.jacchus:70 P.jiroveci:70

F7DPA3              	100.00%		L0PEK0              	100.00%
F7GWG6              	39.90%		
F7AGR8              	25.00%		
Bootstrap support for F7DPA3 as seed ortholog is 100%.
Bootstrap support for L0PEK0 as seed ortholog is 100%.

Group of orthologs #1371. Best score 70 bits
Score difference with first non-orthologous sequence - C.jacchus:70 P.jiroveci:70

F7DEV8              	100.00%		L0PAE3              	100.00%
Bootstrap support for F7DEV8 as seed ortholog is 100%.
Bootstrap support for L0PAE3 as seed ortholog is 100%.

Group of orthologs #1372. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F7I029              	100.00%		L0PAE2              	100.00%
F7ID25              	86.40%		
F7I761              	86.40%		
F7I4V0              	79.20%		
Bootstrap support for F7I029 as seed ortholog is 100%.
Bootstrap support for L0PAE2 as seed ortholog is 100%.

Group of orthologs #1373. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F6Q6G2              	100.00%		L0PB39              	100.00%
F7HM05              	53.23%		
Bootstrap support for F6Q6G2 as seed ortholog is 100%.
Bootstrap support for L0PB39 as seed ortholog is 100%.

Group of orthologs #1374. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F7G7I6              	100.00%		L0PBP5              	100.00%
F6SGZ3              	44.84%		
Bootstrap support for F7G7I6 as seed ortholog is 100%.
Bootstrap support for L0PBP5 as seed ortholog is 100%.

Group of orthologs #1375. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F7IQY3              	100.00%		L0PDZ0              	100.00%
F7HST3              	67.58%		
Bootstrap support for F7IQY3 as seed ortholog is 100%.
Bootstrap support for L0PDZ0 as seed ortholog is 100%.

Group of orthologs #1376. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:22

H9KWU9              	100.00%		L0PG11              	100.00%
F7IA14              	27.73%		
Bootstrap support for H9KWU9 as seed ortholog is 100%.
Bootstrap support for L0PG11 as seed ortholog is 61%.
Alternative seed ortholog is L0PG62 (22 bits away from this cluster)

Group of orthologs #1377. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F6TXK4              	100.00%		L0PAR6              	100.00%
Bootstrap support for F6TXK4 as seed ortholog is 100%.
Bootstrap support for L0PAR6 as seed ortholog is 100%.

Group of orthologs #1378. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F7A9P8              	100.00%		L0P9V1              	100.00%
Bootstrap support for F7A9P8 as seed ortholog is 100%.
Bootstrap support for L0P9V1 as seed ortholog is 100%.

Group of orthologs #1379. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F6YLG6              	100.00%		L0PDR4              	100.00%
Bootstrap support for F6YLG6 as seed ortholog is 100%.
Bootstrap support for L0PDR4 as seed ortholog is 100%.

Group of orthologs #1380. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F6Y767              	100.00%		L0PGR8              	100.00%
Bootstrap support for F6Y767 as seed ortholog is 100%.
Bootstrap support for L0PGR8 as seed ortholog is 100%.

Group of orthologs #1381. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 P.jiroveci:69

F6YTT6              	100.00%		L0PFR5              	100.00%
Bootstrap support for F6YTT6 as seed ortholog is 100%.
Bootstrap support for L0PFR5 as seed ortholog is 100%.

Group of orthologs #1382. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:24 P.jiroveci:69

F7D8D9              	100.00%		L0P881              	100.00%
Bootstrap support for F7D8D9 as seed ortholog is 94%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #1383. Best score 68 bits
Score difference with first non-orthologous sequence - C.jacchus:68 P.jiroveci:68

F7EN77              	100.00%		L0PDY7              	100.00%
F7HSB4              	18.75%		
F7B2Y9              	18.60%		
Bootstrap support for F7EN77 as seed ortholog is 100%.
Bootstrap support for L0PDY7 as seed ortholog is 100%.

Group of orthologs #1384. Best score 68 bits
Score difference with first non-orthologous sequence - C.jacchus:68 P.jiroveci:68

F7A2Y5              	100.00%		L0PEH0              	100.00%
Bootstrap support for F7A2Y5 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #1385. Best score 67 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:67

F6R7Y8              	100.00%		L0P9R4              	100.00%
F6R7K4              	58.91%		
Bootstrap support for F6R7Y8 as seed ortholog is 100%.
Bootstrap support for L0P9R4 as seed ortholog is 100%.

Group of orthologs #1386. Best score 67 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:67

F7DB49              	100.00%		L0P937              	100.00%
Bootstrap support for F7DB49 as seed ortholog is 100%.
Bootstrap support for L0P937 as seed ortholog is 100%.

Group of orthologs #1387. Best score 67 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:67

F7HWI6              	100.00%		L0PAF1              	100.00%
Bootstrap support for F7HWI6 as seed ortholog is 100%.
Bootstrap support for L0PAF1 as seed ortholog is 100%.

Group of orthologs #1388. Best score 67 bits
Score difference with first non-orthologous sequence - C.jacchus:67 P.jiroveci:67

F7HM66              	100.00%		L0PGG4              	100.00%
Bootstrap support for F7HM66 as seed ortholog is 100%.
Bootstrap support for L0PGG4 as seed ortholog is 100%.

Group of orthologs #1389. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:66

F7FEC3              	100.00%		L0PFS6              	100.00%
F7DVQ2              	48.56%		
Bootstrap support for F7FEC3 as seed ortholog is 100%.
Bootstrap support for L0PFS6 as seed ortholog is 100%.

Group of orthologs #1390. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:66

F6RWH9              	100.00%		L0PBK9              	100.00%
Bootstrap support for F6RWH9 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #1391. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:66

F7F8G9              	100.00%		L0PAG5              	100.00%
Bootstrap support for F7F8G9 as seed ortholog is 100%.
Bootstrap support for L0PAG5 as seed ortholog is 100%.

Group of orthologs #1392. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:66

F7FTV4              	100.00%		L0PDW6              	100.00%
Bootstrap support for F7FTV4 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #1393. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:66

F7HAJ2              	100.00%		L0PEU8              	100.00%
Bootstrap support for F7HAJ2 as seed ortholog is 100%.
Bootstrap support for L0PEU8 as seed ortholog is 100%.

Group of orthologs #1394. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 P.jiroveci:66

F7IEY6              	100.00%		L0PE59              	100.00%
Bootstrap support for F7IEY6 as seed ortholog is 100%.
Bootstrap support for L0PE59 as seed ortholog is 100%.

Group of orthologs #1395. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:65

F6VNJ4              	100.00%		L0PAZ6              	100.00%
F7HUQ0              	34.25%		
F7I5Y5              	34.11%		
Bootstrap support for F6VNJ4 as seed ortholog is 100%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #1396. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:65

F6TR69              	100.00%		L0PEN9              	100.00%
H9KXZ2              	47.68%		
F7IC02              	20.37%		
Bootstrap support for F6TR69 as seed ortholog is 100%.
Bootstrap support for L0PEN9 as seed ortholog is 100%.

Group of orthologs #1397. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:65

F7IFJ1              	100.00%		L0PFT6              	100.00%
                    	       		L0P6V3              	44.67%
Bootstrap support for F7IFJ1 as seed ortholog is 100%.
Bootstrap support for L0PFT6 as seed ortholog is 100%.

Group of orthologs #1398. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 P.jiroveci:65

F7IA19              	100.00%		L0PFE2              	100.00%
Bootstrap support for F7IA19 as seed ortholog is 100%.
Bootstrap support for L0PFE2 as seed ortholog is 100%.

Group of orthologs #1399. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:64

F7FC13              	100.00%		L0PFT1              	100.00%
F7I9Z5              	82.69%		
F7FB03              	30.04%		
F6XUK9              	8.48%		
F7IJZ7              	8.13%		
F7HZP4              	7.42%		
Bootstrap support for F7FC13 as seed ortholog is 100%.
Bootstrap support for L0PFT1 as seed ortholog is 100%.

Group of orthologs #1400. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:64

F6YS20              	100.00%		L0P929              	100.00%
F7G790              	54.31%		
Bootstrap support for F6YS20 as seed ortholog is 100%.
Bootstrap support for L0P929 as seed ortholog is 100%.

Group of orthologs #1401. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:64

F7H001              	100.00%		L0PH05              	100.00%
F6YJ32              	99.18%		
Bootstrap support for F7H001 as seed ortholog is 100%.
Bootstrap support for L0PH05 as seed ortholog is 100%.

Group of orthologs #1402. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:64

F6VHU6              	100.00%		L0PAP8              	100.00%
Bootstrap support for F6VHU6 as seed ortholog is 100%.
Bootstrap support for L0PAP8 as seed ortholog is 100%.

Group of orthologs #1403. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 P.jiroveci:64

F7IGI7              	100.00%		L0PB93              	100.00%
Bootstrap support for F7IGI7 as seed ortholog is 100%.
Bootstrap support for L0PB93 as seed ortholog is 100%.

Group of orthologs #1404. Best score 63 bits
Score difference with first non-orthologous sequence - C.jacchus:5 P.jiroveci:63

F6ZVS9              	100.00%		L0P8G6              	100.00%
F7AWN7              	34.87%		
Bootstrap support for F6ZVS9 as seed ortholog is 57%.
Alternative seed ortholog is F7H8H1 (5 bits away from this cluster)
Bootstrap support for L0P8G6 as seed ortholog is 100%.

Group of orthologs #1405. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7C3M8              	100.00%		L0PF02              	100.00%
F6W085              	56.28%		
F7G624              	56.28%		
F7IN24              	53.95%		
Bootstrap support for F7C3M8 as seed ortholog is 100%.
Bootstrap support for L0PF02 as seed ortholog is 100%.

Group of orthologs #1406. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7I4Y8              	100.00%		L0PAI3              	100.00%
F7GDL2              	36.54%		
Bootstrap support for F7I4Y8 as seed ortholog is 100%.
Bootstrap support for L0PAI3 as seed ortholog is 100%.

Group of orthologs #1407. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7IIE7              	100.00%		L0PF40              	100.00%
F7DFB8              	9.15%		
Bootstrap support for F7IIE7 as seed ortholog is 100%.
Bootstrap support for L0PF40 as seed ortholog is 100%.

Group of orthologs #1408. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7IPJ6              	100.00%		L0PE16              	100.00%
F6SML7              	54.49%		
Bootstrap support for F7IPJ6 as seed ortholog is 100%.
Bootstrap support for L0PE16 as seed ortholog is 100%.

Group of orthologs #1409. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F6XGD1              	100.00%		L0PBS8              	100.00%
Bootstrap support for F6XGD1 as seed ortholog is 100%.
Bootstrap support for L0PBS8 as seed ortholog is 100%.

Group of orthologs #1410. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7GYM4              	100.00%		L0PCN6              	100.00%
Bootstrap support for F7GYM4 as seed ortholog is 100%.
Bootstrap support for L0PCN6 as seed ortholog is 100%.

Group of orthologs #1411. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7GXV5              	100.00%		L0PG83              	100.00%
Bootstrap support for F7GXV5 as seed ortholog is 100%.
Bootstrap support for L0PG83 as seed ortholog is 100%.

Group of orthologs #1412. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7HSX2              	100.00%		L0PFH5              	100.00%
Bootstrap support for F7HSX2 as seed ortholog is 100%.
Bootstrap support for L0PFH5 as seed ortholog is 100%.

Group of orthologs #1413. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 P.jiroveci:62

F7HZF8              	100.00%		L0PDH5              	100.00%
Bootstrap support for F7HZF8 as seed ortholog is 100%.
Bootstrap support for L0PDH5 as seed ortholog is 100%.

Group of orthologs #1414. Best score 61 bits
Score difference with first non-orthologous sequence - C.jacchus:7 P.jiroveci:61

F6X235              	100.00%		L0PA64              	100.00%
F7HPC0              	100.00%		
F7IKW3              	36.22%		
F7H530              	25.88%		
F6XXR6              	20.09%		
F6U556              	18.26%		
F7HY88              	11.86%		
F6SBV6              	11.10%		
F6S979              	9.74%		
F7BT73              	8.80%		
F7BGH5              	8.29%		
F7AKD7              	8.04%		
F7IMV8              	7.27%		
F7IPL6              	7.14%		
F6RY89              	7.02%		
F6SR52              	6.12%		
F6WAI8              	5.61%		
F7H2X4              	5.33%		
Bootstrap support for F6X235 as seed ortholog is 56%.
Alternative seed ortholog is F7D6X5 (7 bits away from this cluster)
Bootstrap support for F7HPC0 as seed ortholog is 67%.
Alternative seed ortholog is F7D6X5 (7 bits away from this cluster)
Bootstrap support for L0PA64 as seed ortholog is 100%.

Group of orthologs #1415. Best score 61 bits
Score difference with first non-orthologous sequence - C.jacchus:61 P.jiroveci:61

F7HQJ9              	100.00%		L0PGK4              	100.00%
Bootstrap support for F7HQJ9 as seed ortholog is 100%.
Bootstrap support for L0PGK4 as seed ortholog is 100%.

Group of orthologs #1416. Best score 61 bits
Score difference with first non-orthologous sequence - C.jacchus:12 P.jiroveci:61

F7IBH3              	100.00%		L0P8Q3              	100.00%
Bootstrap support for F7IBH3 as seed ortholog is 67%.
Alternative seed ortholog is F6QJL5 (12 bits away from this cluster)
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #1417. Best score 60 bits
Score difference with first non-orthologous sequence - C.jacchus:60 P.jiroveci:60

H9KVX8              	100.00%		L0PC69              	100.00%
F7G245              	7.65%		
F7IAE3              	5.43%		
Bootstrap support for H9KVX8 as seed ortholog is 100%.
Bootstrap support for L0PC69 as seed ortholog is 100%.

Group of orthologs #1418. Best score 60 bits
Score difference with first non-orthologous sequence - C.jacchus:60 P.jiroveci:60

F7HJF4              	100.00%		L0P7Q6              	100.00%
Bootstrap support for F7HJF4 as seed ortholog is 100%.
Bootstrap support for L0P7Q6 as seed ortholog is 100%.

Group of orthologs #1419. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

F6VKM1              	100.00%		L0PB91              	100.00%
F7ENY2              	89.60%		
F7E2W4              	28.32%		
F7I5F2              	26.01%		
Bootstrap support for F6VKM1 as seed ortholog is 100%.
Bootstrap support for L0PB91 as seed ortholog is 100%.

Group of orthologs #1420. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

H9KXN6              	100.00%		L0PCA9              	100.00%
F7HVQ4              	71.78%		
Bootstrap support for H9KXN6 as seed ortholog is 100%.
Bootstrap support for L0PCA9 as seed ortholog is 100%.

Group of orthologs #1421. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

F6Q1R3              	100.00%		L0P9J8              	100.00%
Bootstrap support for F6Q1R3 as seed ortholog is 100%.
Bootstrap support for L0P9J8 as seed ortholog is 100%.

Group of orthologs #1422. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

F6QHV3              	100.00%		L0PBY4              	100.00%
Bootstrap support for F6QHV3 as seed ortholog is 100%.
Bootstrap support for L0PBY4 as seed ortholog is 100%.

Group of orthologs #1423. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

F6X353              	100.00%		L0PBW6              	100.00%
Bootstrap support for F6X353 as seed ortholog is 100%.
Bootstrap support for L0PBW6 as seed ortholog is 100%.

Group of orthologs #1424. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

F7CF23              	100.00%		L0P9H6              	100.00%
Bootstrap support for F7CF23 as seed ortholog is 100%.
Bootstrap support for L0P9H6 as seed ortholog is 100%.

Group of orthologs #1425. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 P.jiroveci:59

F7I7Z7              	100.00%		L0PBP1              	100.00%
Bootstrap support for F7I7Z7 as seed ortholog is 100%.
Bootstrap support for L0PBP1 as seed ortholog is 100%.

Group of orthologs #1426. Best score 58 bits
Score difference with first non-orthologous sequence - C.jacchus:58 P.jiroveci:58

F6ZEW2              	100.00%		L0P7J7              	100.00%
F7CSV5              	74.57%		
F7IJA1              	28.00%		
H9KXR5              	25.14%		
Bootstrap support for F6ZEW2 as seed ortholog is 100%.
Bootstrap support for L0P7J7 as seed ortholog is 100%.

Group of orthologs #1427. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F6X2A6              	100.00%		L0PGG5              	100.00%
F7AVV7              	100.00%		L0PC31              	100.00%
Bootstrap support for F6X2A6 as seed ortholog is 100%.
Bootstrap support for F7AVV7 as seed ortholog is 100%.
Bootstrap support for L0PGG5 as seed ortholog is 100%.
Bootstrap support for L0PC31 as seed ortholog is 100%.

Group of orthologs #1428. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7FY69              	100.00%		L0PE69              	100.00%
F6XFG4              	38.48%		
Bootstrap support for F7FY69 as seed ortholog is 100%.
Bootstrap support for L0PE69 as seed ortholog is 100%.

Group of orthologs #1429. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7H5P6              	100.00%		L0P8D1              	100.00%
F7I282              	88.89%		
Bootstrap support for F7H5P6 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #1430. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7GXW9              	100.00%		L0PGI1              	100.00%
F7FWY6              	22.86%		
Bootstrap support for F7GXW9 as seed ortholog is 100%.
Bootstrap support for L0PGI1 as seed ortholog is 100%.

Group of orthologs #1431. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7I138              	100.00%		L0PEB3              	100.00%
F7IAM0              	50.56%		
Bootstrap support for F7I138 as seed ortholog is 100%.
Bootstrap support for L0PEB3 as seed ortholog is 100%.

Group of orthologs #1432. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7GUV1              	100.00%		L0PHJ4              	100.00%
Bootstrap support for F7GUV1 as seed ortholog is 100%.
Bootstrap support for L0PHJ4 as seed ortholog is 100%.

Group of orthologs #1433. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7IBS2              	100.00%		L0P9P1              	100.00%
Bootstrap support for F7IBS2 as seed ortholog is 100%.
Bootstrap support for L0P9P1 as seed ortholog is 100%.

Group of orthologs #1434. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7IRX3              	100.00%		L0P7U7              	100.00%
Bootstrap support for F7IRX3 as seed ortholog is 100%.
Bootstrap support for L0P7U7 as seed ortholog is 100%.

Group of orthologs #1435. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 P.jiroveci:57

F7IG83              	100.00%		L0PE07              	100.00%
Bootstrap support for F7IG83 as seed ortholog is 100%.
Bootstrap support for L0PE07 as seed ortholog is 100%.

Group of orthologs #1436. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F6USA3              	100.00%		L0PEA4              	100.00%
F7BML5              	10.04%		
F7IB91              	9.68%		
Bootstrap support for F6USA3 as seed ortholog is 100%.
Bootstrap support for L0PEA4 as seed ortholog is 100%.

Group of orthologs #1437. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F7FZ25              	100.00%		L0PCA4              	100.00%
F7ETX0              	80.05%		
F7HXM5              	60.59%		
Bootstrap support for F7FZ25 as seed ortholog is 100%.
Bootstrap support for L0PCA4 as seed ortholog is 100%.

Group of orthologs #1438. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F7EEM8              	100.00%		L0P8R3              	100.00%
                    	       		L0PB56              	100.00%
Bootstrap support for F7EEM8 as seed ortholog is 100%.
Bootstrap support for L0P8R3 as seed ortholog is 100%.
Bootstrap support for L0PB56 as seed ortholog is 100%.

Group of orthologs #1439. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F6XW42              	100.00%		L0PD80              	100.00%
Bootstrap support for F6XW42 as seed ortholog is 100%.
Bootstrap support for L0PD80 as seed ortholog is 100%.

Group of orthologs #1440. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F6WRG6              	100.00%		L0PGC3              	100.00%
Bootstrap support for F6WRG6 as seed ortholog is 100%.
Bootstrap support for L0PGC3 as seed ortholog is 100%.

Group of orthologs #1441. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F7FUD2              	100.00%		L0P9L4              	100.00%
Bootstrap support for F7FUD2 as seed ortholog is 100%.
Bootstrap support for L0P9L4 as seed ortholog is 100%.

Group of orthologs #1442. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F7EAC3              	100.00%		L0PFE5              	100.00%
Bootstrap support for F7EAC3 as seed ortholog is 100%.
Bootstrap support for L0PFE5 as seed ortholog is 100%.

Group of orthologs #1443. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F7GXY7              	100.00%		L0P8K9              	100.00%
Bootstrap support for F7GXY7 as seed ortholog is 100%.
Bootstrap support for L0P8K9 as seed ortholog is 100%.

Group of orthologs #1444. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 P.jiroveci:56

F7ITC9              	100.00%		L0PGU4              	100.00%
Bootstrap support for F7ITC9 as seed ortholog is 100%.
Bootstrap support for L0PGU4 as seed ortholog is 100%.

Group of orthologs #1445. Best score 54 bits
Score difference with first non-orthologous sequence - C.jacchus:7 P.jiroveci:54

F6UWI3              	100.00%		L0PCQ9              	100.00%
F7I4R8              	36.76%		
F6UEA4              	13.86%		
F7HK97              	13.24%		
F6WPG3              	12.13%		
F6SX60              	12.00%		
F7ITA7              	11.76%		
F7IQV5              	11.26%		
F7HM25              	10.40%		
F7BCK8              	10.15%		
F6YI76              	9.90%		
F7EZN0              	8.66%		
F7HSJ8              	8.66%		
F7INP5              	8.54%		
F7IEU8              	8.42%		
F7GTZ9              	8.04%		
F7AKQ0              	7.80%		
F6RR90              	7.43%		
F6TRK5              	7.43%		
F7H8Z5              	6.93%		
F7IQ17              	6.81%		
F7I3E0              	6.68%		
F7H721              	6.68%		
F6Z4Q0              	6.56%		
F7H8C9              	6.44%		
F6QDR1              	6.19%		
F7IJR1              	5.69%		
F7IAT3              	5.57%		
F7F9G3              	5.32%		
Bootstrap support for F6UWI3 as seed ortholog is 60%.
Alternative seed ortholog is F7ELQ8 (7 bits away from this cluster)
Bootstrap support for L0PCQ9 as seed ortholog is 100%.

Group of orthologs #1446. Best score 54 bits
Score difference with first non-orthologous sequence - C.jacchus:54 P.jiroveci:54

F7DIW3              	100.00%		L0PB78              	100.00%
H9KWR0              	86.12%		
H9KWM9              	44.48%		
F6TV78              	39.67%		
F7FT56              	26.56%		
F6PGX8              	5.14%		
Bootstrap support for F7DIW3 as seed ortholog is 100%.
Bootstrap support for L0PB78 as seed ortholog is 100%.

Group of orthologs #1447. Best score 54 bits
Score difference with first non-orthologous sequence - C.jacchus:54 P.jiroveci:54

F7IBR9              	100.00%		L0P9B7              	100.00%
Bootstrap support for F7IBR9 as seed ortholog is 100%.
Bootstrap support for L0P9B7 as seed ortholog is 100%.

Group of orthologs #1448. Best score 53 bits
Score difference with first non-orthologous sequence - C.jacchus:53 P.jiroveci:53

F6Z868              	100.00%		L0P994              	100.00%
F7BNJ4              	46.17%		
F7IPS4              	40.29%		
F7DY65              	39.80%		
F7IN12              	38.01%		
H9KVI8              	32.63%		
F7E9M8              	30.83%		
F7GVA7              	29.53%		
F7A197              	29.36%		
F7FGX9              	29.04%		
F6Z0K1              	28.71%		
H9KWU4              	27.90%		
H9KWG0              	26.75%		
H9KYI1              	26.26%		
F7DES7              	25.12%		
H9KXH5              	25.12%		
F7I964              	24.14%		
F6X1H4              	23.65%		
F7DUS1              	22.84%		
F6PUZ7              	22.02%		
H9KWI9              	18.76%		
F7GV71              	16.15%		
F7GRX4              	14.68%		
F7GU83              	14.52%		
F7IT19              	11.09%		
F7EP75              	10.93%		
F7IK97              	10.60%		
F7EW71              	5.38%		
Bootstrap support for F6Z868 as seed ortholog is 100%.
Bootstrap support for L0P994 as seed ortholog is 100%.

Group of orthologs #1449. Best score 53 bits
Score difference with first non-orthologous sequence - C.jacchus:53 P.jiroveci:53

F6RM23              	100.00%		L0PDF6              	100.00%
F7CG01              	100.00%		L0PBB5              	100.00%
F7IE66              	100.00%		
F7CAZ4              	81.03%		
F7AHV6              	77.60%		
F7HKA7              	74.04%		
B0CM99              	71.00%		
F7HD57              	68.83%		
F6TGR9              	68.58%		
H9KWS2              	68.58%		
F7H3I8              	65.85%		
F7FMJ0              	63.11%		
F7CWX7              	60.66%		
F7GZS3              	59.56%		
F7IGW7              	58.47%		
F6ZJV1              	54.92%		
F7IGQ4              	52.46%		
F6VHL5              	50.55%		
F6WD49              	49.86%		
F6UBD6              	45.53%		
F7HSU1              	43.44%		
F6U1V8              	42.62%		
F7H4M6              	41.26%		
Bootstrap support for F6RM23 as seed ortholog is 100%.
Bootstrap support for F7CG01 as seed ortholog is 100%.
Bootstrap support for F7IE66 as seed ortholog is 100%.
Bootstrap support for L0PDF6 as seed ortholog is 100%.
Bootstrap support for L0PBB5 as seed ortholog is 100%.

Group of orthologs #1450. Best score 53 bits
Score difference with first non-orthologous sequence - C.jacchus:53 P.jiroveci:53

F7CRE2              	100.00%		L0PEY1              	100.00%
Bootstrap support for F7CRE2 as seed ortholog is 100%.
Bootstrap support for L0PEY1 as seed ortholog is 100%.

Group of orthologs #1451. Best score 52 bits
Score difference with first non-orthologous sequence - C.jacchus:52 P.jiroveci:52

F6X4E5              	100.00%		L0PB26              	100.00%
F6Y0K8              	57.96%		
Bootstrap support for F6X4E5 as seed ortholog is 100%.
Bootstrap support for L0PB26 as seed ortholog is 100%.

Group of orthologs #1452. Best score 52 bits
Score difference with first non-orthologous sequence - C.jacchus:52 P.jiroveci:52

H9KXB4              	100.00%		L0P8P9              	100.00%
H9KYI7              	5.31%		
Bootstrap support for H9KXB4 as seed ortholog is 100%.
Bootstrap support for L0P8P9 as seed ortholog is 100%.

Group of orthologs #1453. Best score 52 bits
Score difference with first non-orthologous sequence - C.jacchus:52 P.jiroveci:52

F7FWW5              	100.00%		L0PFV5              	100.00%
Bootstrap support for F7FWW5 as seed ortholog is 100%.
Bootstrap support for L0PFV5 as seed ortholog is 100%.

Group of orthologs #1454. Best score 51 bits
Score difference with first non-orthologous sequence - C.jacchus:2 P.jiroveci:51

F7IRM4              	100.00%		L0PE88              	100.00%
Q2QLG8              	46.06%		
Bootstrap support for F7IRM4 as seed ortholog is 54%.
Alternative seed ortholog is F6TQ88 (2 bits away from this cluster)
Bootstrap support for L0PE88 as seed ortholog is 100%.

Group of orthologs #1455. Best score 51 bits
Score difference with first non-orthologous sequence - C.jacchus:51 P.jiroveci:51

F6TTP2              	100.00%		L0PFN8              	100.00%
Bootstrap support for F6TTP2 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #1456. Best score 51 bits
Score difference with first non-orthologous sequence - C.jacchus:51 P.jiroveci:51

F7ABX0              	100.00%		L0PF85              	100.00%
Bootstrap support for F7ABX0 as seed ortholog is 100%.
Bootstrap support for L0PF85 as seed ortholog is 100%.

Group of orthologs #1457. Best score 50 bits
Score difference with first non-orthologous sequence - C.jacchus:50 P.jiroveci:50

F7IAD9              	100.00%		L0PEE9              	100.00%
F7I671              	36.53%		
Bootstrap support for F7IAD9 as seed ortholog is 100%.
Bootstrap support for L0PEE9 as seed ortholog is 100%.

Group of orthologs #1458. Best score 50 bits
Score difference with first non-orthologous sequence - C.jacchus:50 P.jiroveci:50

F7I3Z5              	100.00%		L0PHM6              	100.00%
Bootstrap support for F7I3Z5 as seed ortholog is 100%.
Bootstrap support for L0PHM6 as seed ortholog is 100%.

Group of orthologs #1459. Best score 49 bits
Score difference with first non-orthologous sequence - C.jacchus:49 P.jiroveci:49

F7HFG4              	100.00%		L0P8K7              	100.00%
F7IGD7              	45.56%		
Bootstrap support for F7HFG4 as seed ortholog is 100%.
Bootstrap support for L0P8K7 as seed ortholog is 100%.

Group of orthologs #1460. Best score 49 bits
Score difference with first non-orthologous sequence - C.jacchus:49 P.jiroveci:49

F6YB57              	100.00%		L0P9X6              	100.00%
Bootstrap support for F6YB57 as seed ortholog is 100%.
Bootstrap support for L0P9X6 as seed ortholog is 100%.

Group of orthologs #1461. Best score 49 bits
Score difference with first non-orthologous sequence - C.jacchus:49 P.jiroveci:49

F7IIC7              	100.00%		L0P9A3              	100.00%
Bootstrap support for F7IIC7 as seed ortholog is 100%.
Bootstrap support for L0P9A3 as seed ortholog is 100%.

Group of orthologs #1462. Best score 49 bits
Score difference with first non-orthologous sequence - C.jacchus:49 P.jiroveci:49

H9KXT7              	100.00%		L0PGI8              	100.00%
Bootstrap support for H9KXT7 as seed ortholog is 100%.
Bootstrap support for L0PGI8 as seed ortholog is 100%.

Group of orthologs #1463. Best score 48 bits
Score difference with first non-orthologous sequence - C.jacchus:48 P.jiroveci:48

F7DWY4              	100.00%		L0PAH6              	100.00%
Bootstrap support for F7DWY4 as seed ortholog is 100%.
Bootstrap support for L0PAH6 as seed ortholog is 100%.

Group of orthologs #1464. Best score 47 bits
Score difference with first non-orthologous sequence - C.jacchus:47 P.jiroveci:47

F6W7U6              	100.00%		L0P9T4              	100.00%
F7F2J3              	10.17%		L0PFA0              	100.00%
Bootstrap support for F6W7U6 as seed ortholog is 100%.
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.

Group of orthologs #1465. Best score 47 bits
Score difference with first non-orthologous sequence - C.jacchus:47 P.jiroveci:47

F6XDU1              	100.00%		L0PDN1              	100.00%
Bootstrap support for F6XDU1 as seed ortholog is 100%.
Bootstrap support for L0PDN1 as seed ortholog is 100%.

Group of orthologs #1466. Best score 47 bits
Score difference with first non-orthologous sequence - C.jacchus:47 P.jiroveci:47

F7HWQ5              	100.00%		L0PGZ4              	100.00%
Bootstrap support for F7HWQ5 as seed ortholog is 100%.
Bootstrap support for L0PGZ4 as seed ortholog is 100%.

Group of orthologs #1467. Best score 47 bits
Score difference with first non-orthologous sequence - C.jacchus:47 P.jiroveci:47

H9KWK0              	100.00%		L0PDW0              	100.00%
Bootstrap support for H9KWK0 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #1468. Best score 46 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:46

F6SCW9              	100.00%		L0PBR6              	100.00%
Bootstrap support for F6SCW9 as seed ortholog is 100%.
Bootstrap support for L0PBR6 as seed ortholog is 100%.

Group of orthologs #1469. Best score 46 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:46

F7A702              	100.00%		L0PA08              	100.00%
Bootstrap support for F7A702 as seed ortholog is 100%.
Bootstrap support for L0PA08 as seed ortholog is 100%.

Group of orthologs #1470. Best score 46 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:46

F7HV49              	100.00%		L0P9H2              	100.00%
Bootstrap support for F7HV49 as seed ortholog is 100%.
Bootstrap support for L0P9H2 as seed ortholog is 100%.

Group of orthologs #1471. Best score 46 bits
Score difference with first non-orthologous sequence - C.jacchus:46 P.jiroveci:46

F7I9G9              	100.00%		L0PCV0              	100.00%
Bootstrap support for F7I9G9 as seed ortholog is 100%.
Bootstrap support for L0PCV0 as seed ortholog is 100%.

Group of orthologs #1472. Best score 45 bits
Score difference with first non-orthologous sequence - C.jacchus:45 P.jiroveci:45

F6SEU8              	100.00%		L0P875              	100.00%
Bootstrap support for F6SEU8 as seed ortholog is 100%.
Bootstrap support for L0P875 as seed ortholog is 100%.

Group of orthologs #1473. Best score 45 bits
Score difference with first non-orthologous sequence - C.jacchus:45 P.jiroveci:45

F6Z6C1              	100.00%		L0P8A9              	100.00%
Bootstrap support for F6Z6C1 as seed ortholog is 100%.
Bootstrap support for L0P8A9 as seed ortholog is 100%.

Group of orthologs #1474. Best score 45 bits
Score difference with first non-orthologous sequence - C.jacchus:1 P.jiroveci:45

F7H7U1              	100.00%		L0P7W0              	100.00%
Bootstrap support for F7H7U1 as seed ortholog is 50%.
Alternative seed ortholog is F7I886 (1 bits away from this cluster)
Bootstrap support for L0P7W0 as seed ortholog is 100%.

Group of orthologs #1475. Best score 45 bits
Score difference with first non-orthologous sequence - C.jacchus:45 P.jiroveci:45

F7H244              	100.00%		L0PFI4              	100.00%
Bootstrap support for F7H244 as seed ortholog is 100%.
Bootstrap support for L0PFI4 as seed ortholog is 100%.

Group of orthologs #1476. Best score 44 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:44

F7FTH9              	100.00%		L0PG70              	100.00%
Bootstrap support for F7FTH9 as seed ortholog is 100%.
Bootstrap support for L0PG70 as seed ortholog is 100%.

Group of orthologs #1477. Best score 44 bits
Score difference with first non-orthologous sequence - C.jacchus:44 P.jiroveci:44

F7HTN1              	100.00%		L0PD94              	100.00%
Bootstrap support for F7HTN1 as seed ortholog is 100%.
Bootstrap support for L0PD94 as seed ortholog is 100%.

Group of orthologs #1478. Best score 43 bits
Score difference with first non-orthologous sequence - C.jacchus:43 P.jiroveci:43

F7HWB2              	100.00%		L0PB71              	100.00%
Bootstrap support for F7HWB2 as seed ortholog is 100%.
Bootstrap support for L0PB71 as seed ortholog is 100%.

Group of orthologs #1479. Best score 42 bits
Score difference with first non-orthologous sequence - C.jacchus:42 P.jiroveci:42

F7I363              	100.00%		L0PAV1              	100.00%
F7HQW7              	47.52%		
Bootstrap support for F7I363 as seed ortholog is 100%.
Bootstrap support for L0PAV1 as seed ortholog is 100%.

Group of orthologs #1480. Best score 41 bits
Score difference with first non-orthologous sequence - C.jacchus:41 P.jiroveci:41

F7IT30              	100.00%		L0PHA2              	100.00%
F7I7N2              	39.09%		
Bootstrap support for F7IT30 as seed ortholog is 100%.
Bootstrap support for L0PHA2 as seed ortholog is 100%.