###################################
5233 groups of orthologs
5696 in-paralogs from C.intestinalis
7561 in-paralogs from T.nigroviridis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 14171 bits
Score difference with first non-orthologous sequence - C.intestinalis:14171 T.nigroviridis:14171

F6TD21              	100.00%		H3DPY8              	100.00%
Bootstrap support for F6TD21 as seed ortholog is 100%.
Bootstrap support for H3DPY8 as seed ortholog is 100%.

Group of orthologs #2. Best score 4739 bits
Score difference with first non-orthologous sequence - C.intestinalis:1189 T.nigroviridis:35

F7AU91              	100.00%		H3CJ41              	100.00%
F6ZZ40              	17.95%		
Bootstrap support for F7AU91 as seed ortholog is 100%.
Bootstrap support for H3CJ41 as seed ortholog is 62%.
Alternative seed ortholog is H3CMW3 (35 bits away from this cluster)

Group of orthologs #3. Best score 4643 bits
Score difference with first non-orthologous sequence - C.intestinalis:4643 T.nigroviridis:4643

H2XSF3              	100.00%		H3DJ90              	100.00%
                    	       		H3CFT0              	30.01%
                    	       		H3BY57              	10.22%
Bootstrap support for H2XSF3 as seed ortholog is 100%.
Bootstrap support for H3DJ90 as seed ortholog is 100%.

Group of orthologs #4. Best score 2878 bits
Score difference with first non-orthologous sequence - C.intestinalis:2878 T.nigroviridis:2878

F6T0F1              	100.00%		H3CZJ8              	100.00%
                    	       		H3C4M0              	34.08%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for H3CZJ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 2816 bits
Score difference with first non-orthologous sequence - C.intestinalis:2816 T.nigroviridis:1773

F6WWV8              	100.00%		H3D1B2              	100.00%
Bootstrap support for F6WWV8 as seed ortholog is 100%.
Bootstrap support for H3D1B2 as seed ortholog is 100%.

Group of orthologs #6. Best score 2802 bits
Score difference with first non-orthologous sequence - C.intestinalis:2802 T.nigroviridis:1722

F7AMF6              	100.00%		H3D2E7              	100.00%
                    	       		H3DD68              	23.89%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for H3D2E7 as seed ortholog is 100%.

Group of orthologs #7. Best score 2800 bits
Score difference with first non-orthologous sequence - C.intestinalis:2800 T.nigroviridis:1456

F6ZLB7              	100.00%		H3CFC6              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for H3CFC6 as seed ortholog is 100%.

Group of orthologs #8. Best score 2755 bits
Score difference with first non-orthologous sequence - C.intestinalis:2755 T.nigroviridis:1531

F6XWC8              	100.00%		H3DH31              	100.00%
Bootstrap support for F6XWC8 as seed ortholog is 100%.
Bootstrap support for H3DH31 as seed ortholog is 100%.

Group of orthologs #9. Best score 2708 bits
Score difference with first non-orthologous sequence - C.intestinalis:2708 T.nigroviridis:977

F6WN97              	100.00%		H3DF15              	100.00%
                    	       		H3CKW6              	27.84%
                    	       		H3CM53              	5.19%
Bootstrap support for F6WN97 as seed ortholog is 100%.
Bootstrap support for H3DF15 as seed ortholog is 100%.

Group of orthologs #10. Best score 2672 bits
Score difference with first non-orthologous sequence - C.intestinalis:2672 T.nigroviridis:2089

F6WEY7              	100.00%		H3BZV9              	100.00%
                    	       		H3C692              	44.13%
Bootstrap support for F6WEY7 as seed ortholog is 100%.
Bootstrap support for H3BZV9 as seed ortholog is 100%.

Group of orthologs #11. Best score 2669 bits
Score difference with first non-orthologous sequence - C.intestinalis:2669 T.nigroviridis:2669

F7BBD1              	100.00%		H3DMY7              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for H3DMY7 as seed ortholog is 100%.

Group of orthologs #12. Best score 2667 bits
Score difference with first non-orthologous sequence - C.intestinalis:2667 T.nigroviridis:2067

F6SUC2              	100.00%		H3CXP9              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for H3CXP9 as seed ortholog is 100%.

Group of orthologs #13. Best score 2621 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 T.nigroviridis:324

H2Y265              	100.00%		H3C1R4              	100.00%
H2XWY7              	96.92%		H3BXZ2              	70.61%
                    	       		H3DB40              	33.51%
                    	       		H3DR28              	32.98%
                    	       		H3CMS1              	30.26%
                    	       		H3CE06              	26.75%
Bootstrap support for H2Y265 as seed ortholog is 100%.
Bootstrap support for H3C1R4 as seed ortholog is 100%.

Group of orthologs #14. Best score 2472 bits
Score difference with first non-orthologous sequence - C.intestinalis:2472 T.nigroviridis:2472

F6WUQ7              	100.00%		H3DEN8              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for H3DEN8 as seed ortholog is 100%.

Group of orthologs #15. Best score 2469 bits
Score difference with first non-orthologous sequence - C.intestinalis:2469 T.nigroviridis:2375

F6UG85              	100.00%		H3CLU3              	100.00%
                    	       		H3DJ44              	18.22%
Bootstrap support for F6UG85 as seed ortholog is 100%.
Bootstrap support for H3CLU3 as seed ortholog is 100%.

Group of orthologs #16. Best score 2466 bits
Score difference with first non-orthologous sequence - C.intestinalis:2466 T.nigroviridis:855

F6WNE0              	100.00%		H3CDI9              	100.00%
Bootstrap support for F6WNE0 as seed ortholog is 100%.
Bootstrap support for H3CDI9 as seed ortholog is 100%.

Group of orthologs #17. Best score 2349 bits
Score difference with first non-orthologous sequence - C.intestinalis:2349 T.nigroviridis:875

F6Q5V5              	100.00%		H3CNY5              	100.00%
                    	       		H3CXG7              	29.30%
                    	       		H3CH00              	14.02%
Bootstrap support for F6Q5V5 as seed ortholog is 100%.
Bootstrap support for H3CNY5 as seed ortholog is 100%.

Group of orthologs #18. Best score 2347 bits
Score difference with first non-orthologous sequence - C.intestinalis:2347 T.nigroviridis:787

F6X056              	100.00%		H3CIM6              	100.00%
Bootstrap support for F6X056 as seed ortholog is 100%.
Bootstrap support for H3CIM6 as seed ortholog is 100%.

Group of orthologs #19. Best score 2289 bits
Score difference with first non-orthologous sequence - C.intestinalis:968 T.nigroviridis:114

H2XZY7              	100.00%		H3D9D5              	100.00%
                    	       		H3BYF2              	5.00%
Bootstrap support for H2XZY7 as seed ortholog is 100%.
Bootstrap support for H3D9D5 as seed ortholog is 94%.

Group of orthologs #20. Best score 2257 bits
Score difference with first non-orthologous sequence - C.intestinalis:2257 T.nigroviridis:2257

F7AZ47              	100.00%		H3C784              	100.00%
                    	       		H3DMI5              	14.23%
                    	       		H3C6P3              	10.80%
Bootstrap support for F7AZ47 as seed ortholog is 100%.
Bootstrap support for H3C784 as seed ortholog is 100%.

Group of orthologs #21. Best score 2196 bits
Score difference with first non-orthologous sequence - C.intestinalis:2196 T.nigroviridis:2196

F6XN27              	100.00%		H3DC96              	100.00%
Bootstrap support for F6XN27 as seed ortholog is 100%.
Bootstrap support for H3DC96 as seed ortholog is 100%.

Group of orthologs #22. Best score 2192 bits
Score difference with first non-orthologous sequence - C.intestinalis:2192 T.nigroviridis:2192

F6R5F9              	100.00%		H3CIT4              	100.00%
Bootstrap support for F6R5F9 as seed ortholog is 100%.
Bootstrap support for H3CIT4 as seed ortholog is 100%.

Group of orthologs #23. Best score 2184 bits
Score difference with first non-orthologous sequence - C.intestinalis:2184 T.nigroviridis:2184

F6XQM9              	100.00%		H3D1L7              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for H3D1L7 as seed ortholog is 100%.

Group of orthologs #24. Best score 2102 bits
Score difference with first non-orthologous sequence - C.intestinalis:2102 T.nigroviridis:1651

F6R8M3              	100.00%		H3CNU5              	100.00%
                    	       		H3CJ62              	21.96%
                    	       		H3CLE7              	16.82%
Bootstrap support for F6R8M3 as seed ortholog is 100%.
Bootstrap support for H3CNU5 as seed ortholog is 100%.

Group of orthologs #25. Best score 2080 bits
Score difference with first non-orthologous sequence - C.intestinalis:2080 T.nigroviridis:1310

F6QR00              	100.00%		H3CH30              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for H3CH30 as seed ortholog is 100%.

Group of orthologs #26. Best score 2061 bits
Score difference with first non-orthologous sequence - C.intestinalis:2061 T.nigroviridis:2061

F6YKH7              	100.00%		H3C9T0              	100.00%
                    	       		H3D3M6              	36.92%
                    	       		H3CDP2              	27.16%
Bootstrap support for F6YKH7 as seed ortholog is 100%.
Bootstrap support for H3C9T0 as seed ortholog is 100%.

Group of orthologs #27. Best score 2015 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 T.nigroviridis:230

F6V620              	100.00%		H3DEJ9              	100.00%
H2XPC8              	49.13%		
F6PHB9              	44.00%		
Bootstrap support for F6V620 as seed ortholog is 100%.
Bootstrap support for H3DEJ9 as seed ortholog is 97%.

Group of orthologs #28. Best score 2009 bits
Score difference with first non-orthologous sequence - C.intestinalis:2009 T.nigroviridis:2009

H2XKE2              	100.00%		H3CA85              	100.00%
Bootstrap support for H2XKE2 as seed ortholog is 100%.
Bootstrap support for H3CA85 as seed ortholog is 100%.

Group of orthologs #29. Best score 1992 bits
Score difference with first non-orthologous sequence - C.intestinalis:1992 T.nigroviridis:1542

H2XRN5              	100.00%		H3CBU0              	100.00%
Bootstrap support for H2XRN5 as seed ortholog is 100%.
Bootstrap support for H3CBU0 as seed ortholog is 100%.

Group of orthologs #30. Best score 1977 bits
Score difference with first non-orthologous sequence - C.intestinalis:1472 T.nigroviridis:200

F6X5E1              	100.00%		H3D393              	100.00%
                    	       		H3DB19              	23.14%
Bootstrap support for F6X5E1 as seed ortholog is 100%.
Bootstrap support for H3D393 as seed ortholog is 94%.

Group of orthologs #31. Best score 1924 bits
Score difference with first non-orthologous sequence - C.intestinalis:1924 T.nigroviridis:558

H2Y0W9              	100.00%		H3DGW4              	100.00%
Bootstrap support for H2Y0W9 as seed ortholog is 100%.
Bootstrap support for H3DGW4 as seed ortholog is 100%.

Group of orthologs #32. Best score 1886 bits
Score difference with first non-orthologous sequence - C.intestinalis:1886 T.nigroviridis:544

F6VBD0              	100.00%		H3D414              	100.00%
Bootstrap support for F6VBD0 as seed ortholog is 100%.
Bootstrap support for H3D414 as seed ortholog is 100%.

Group of orthologs #33. Best score 1886 bits
Score difference with first non-orthologous sequence - C.intestinalis:1886 T.nigroviridis:1886

F7AHP3              	100.00%		H3D6Z1              	100.00%
Bootstrap support for F7AHP3 as seed ortholog is 100%.
Bootstrap support for H3D6Z1 as seed ortholog is 100%.

Group of orthologs #34. Best score 1848 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 T.nigroviridis:810

F6QCF9              	100.00%		H3D6W8              	100.00%
                    	       		H3DCB7              	40.10%
                    	       		H3C421              	21.73%
                    	       		Q2XVR5              	19.89%
                    	       		H3BWS1              	19.76%
                    	       		H3C5W2              	19.71%
                    	       		Q2XVR4              	17.47%
Bootstrap support for F6QCF9 as seed ortholog is 100%.
Bootstrap support for H3D6W8 as seed ortholog is 100%.

Group of orthologs #35. Best score 1839 bits
Score difference with first non-orthologous sequence - C.intestinalis:1839 T.nigroviridis:1380

F6URP5              	100.00%		H3BYE3              	100.00%
                    	       		H3DAY8              	38.42%
                    	       		H3D3A2              	29.76%
Bootstrap support for F6URP5 as seed ortholog is 100%.
Bootstrap support for H3BYE3 as seed ortholog is 100%.

Group of orthologs #36. Best score 1825 bits
Score difference with first non-orthologous sequence - C.intestinalis:1825 T.nigroviridis:1678

F6UE33              	100.00%		H3BWW0              	100.00%
                    	       		H3CH50              	32.62%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for H3BWW0 as seed ortholog is 100%.

Group of orthologs #37. Best score 1813 bits
Score difference with first non-orthologous sequence - C.intestinalis:1262 T.nigroviridis:581

F6Q8W5              	100.00%		H3D165              	100.00%
                    	       		H3CI10              	10.28%
                    	       		H3DDH5              	8.05%
Bootstrap support for F6Q8W5 as seed ortholog is 100%.
Bootstrap support for H3D165 as seed ortholog is 100%.

Group of orthologs #38. Best score 1779 bits
Score difference with first non-orthologous sequence - C.intestinalis:1779 T.nigroviridis:1779

F6SSI2              	100.00%		H3CAA5              	100.00%
                    	       		H3DRB2              	17.46%
Bootstrap support for F6SSI2 as seed ortholog is 100%.
Bootstrap support for H3CAA5 as seed ortholog is 100%.

Group of orthologs #39. Best score 1760 bits
Score difference with first non-orthologous sequence - C.intestinalis:1760 T.nigroviridis:1760

F6SXA4              	100.00%		H3CGY9              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for H3CGY9 as seed ortholog is 100%.

Group of orthologs #40. Best score 1689 bits
Score difference with first non-orthologous sequence - C.intestinalis:898 T.nigroviridis:195

F6Z448              	100.00%		H3C8B6              	100.00%
                    	       		H3CS58              	14.13%
                    	       		H3DLE5              	8.58%
Bootstrap support for F6Z448 as seed ortholog is 100%.
Bootstrap support for H3C8B6 as seed ortholog is 100%.

Group of orthologs #41. Best score 1672 bits
Score difference with first non-orthologous sequence - C.intestinalis:1672 T.nigroviridis:1672

H2XJT1              	100.00%		H3CCH5              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for H3CCH5 as seed ortholog is 100%.

Group of orthologs #42. Best score 1667 bits
Score difference with first non-orthologous sequence - C.intestinalis:1667 T.nigroviridis:1667

F6ZP18              	100.00%		H3DIN0              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for H3DIN0 as seed ortholog is 100%.

Group of orthologs #43. Best score 1657 bits
Score difference with first non-orthologous sequence - C.intestinalis:1657 T.nigroviridis:1270

F7BIX8              	100.00%		H3D6X9              	100.00%
                    	       		H3CHR1              	23.73%
                    	       		H3CQQ8              	15.02%
Bootstrap support for F7BIX8 as seed ortholog is 100%.
Bootstrap support for H3D6X9 as seed ortholog is 100%.

Group of orthologs #44. Best score 1648 bits
Score difference with first non-orthologous sequence - C.intestinalis:1648 T.nigroviridis:1648

F7AKG2              	100.00%		H3DLE0              	100.00%
                    	       		H3C592              	19.48%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for H3DLE0 as seed ortholog is 100%.

Group of orthologs #45. Best score 1639 bits
Score difference with first non-orthologous sequence - C.intestinalis:1639 T.nigroviridis:1639

F6XJM1              	100.00%		H3CRU1              	100.00%
Bootstrap support for F6XJM1 as seed ortholog is 100%.
Bootstrap support for H3CRU1 as seed ortholog is 100%.

Group of orthologs #46. Best score 1626 bits
Score difference with first non-orthologous sequence - C.intestinalis:1626 T.nigroviridis:1201

F6YII9              	100.00%		H3D175              	100.00%
                    	       		H3DD53              	36.67%
                    	       		H3C3S5              	28.20%
Bootstrap support for F6YII9 as seed ortholog is 100%.
Bootstrap support for H3D175 as seed ortholog is 100%.

Group of orthologs #47. Best score 1616 bits
Score difference with first non-orthologous sequence - C.intestinalis:1306 T.nigroviridis:1091

F6YKR9              	100.00%		H3CAR0              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for H3CAR0 as seed ortholog is 100%.

Group of orthologs #48. Best score 1608 bits
Score difference with first non-orthologous sequence - C.intestinalis:1608 T.nigroviridis:1608

F6PXA1              	100.00%		H3CU89              	100.00%
Bootstrap support for F6PXA1 as seed ortholog is 100%.
Bootstrap support for H3CU89 as seed ortholog is 100%.

Group of orthologs #49. Best score 1576 bits
Score difference with first non-orthologous sequence - C.intestinalis:1576 T.nigroviridis:1576

F6QH36              	100.00%		H3DD62              	100.00%
Bootstrap support for F6QH36 as seed ortholog is 100%.
Bootstrap support for H3DD62 as seed ortholog is 100%.

Group of orthologs #50. Best score 1570 bits
Score difference with first non-orthologous sequence - C.intestinalis:1043 T.nigroviridis:1005

F6SKF5              	100.00%		H3CN30              	100.00%
                    	       		H3CN28              	8.47%
                    	       		H3D515              	7.80%
Bootstrap support for F6SKF5 as seed ortholog is 100%.
Bootstrap support for H3CN30 as seed ortholog is 100%.

Group of orthologs #51. Best score 1567 bits
Score difference with first non-orthologous sequence - C.intestinalis:1567 T.nigroviridis:1020

F6RXY6              	100.00%		H3DCP0              	100.00%
Bootstrap support for F6RXY6 as seed ortholog is 100%.
Bootstrap support for H3DCP0 as seed ortholog is 100%.

Group of orthologs #52. Best score 1563 bits
Score difference with first non-orthologous sequence - C.intestinalis:1563 T.nigroviridis:485

F6PWI5              	100.00%		H3D8A9              	100.00%
                    	       		H3CA11              	17.98%
Bootstrap support for F6PWI5 as seed ortholog is 100%.
Bootstrap support for H3D8A9 as seed ortholog is 100%.

Group of orthologs #53. Best score 1536 bits
Score difference with first non-orthologous sequence - C.intestinalis:1536 T.nigroviridis:1536

F7A8L3              	100.00%		H3DM27              	100.00%
                    	       		H3CYC6              	10.13%
Bootstrap support for F7A8L3 as seed ortholog is 100%.
Bootstrap support for H3DM27 as seed ortholog is 100%.

Group of orthologs #54. Best score 1528 bits
Score difference with first non-orthologous sequence - C.intestinalis:1528 T.nigroviridis:904

F6Q5L9              	100.00%		H3C2J6              	100.00%
                    	       		H3BWZ0              	35.40%
Bootstrap support for F6Q5L9 as seed ortholog is 100%.
Bootstrap support for H3C2J6 as seed ortholog is 100%.

Group of orthologs #55. Best score 1517 bits
Score difference with first non-orthologous sequence - C.intestinalis:1517 T.nigroviridis:1517

F7AKQ3              	100.00%		H3DBG3              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for H3DBG3 as seed ortholog is 100%.

Group of orthologs #56. Best score 1506 bits
Score difference with first non-orthologous sequence - C.intestinalis:1288 T.nigroviridis:1270

H2XKB1              	100.00%		H3D1R5              	100.00%
Bootstrap support for H2XKB1 as seed ortholog is 100%.
Bootstrap support for H3D1R5 as seed ortholog is 100%.

Group of orthologs #57. Best score 1502 bits
Score difference with first non-orthologous sequence - C.intestinalis:1502 T.nigroviridis:1118

Q4H2Q8              	100.00%		H3DK21              	100.00%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for H3DK21 as seed ortholog is 100%.

Group of orthologs #58. Best score 1499 bits
Score difference with first non-orthologous sequence - C.intestinalis:1160 T.nigroviridis:281

H2XY07              	100.00%		H3CLN4              	100.00%
                    	       		H3CH26              	25.72%
Bootstrap support for H2XY07 as seed ortholog is 100%.
Bootstrap support for H3CLN4 as seed ortholog is 100%.

Group of orthologs #59. Best score 1497 bits
Score difference with first non-orthologous sequence - C.intestinalis:1497 T.nigroviridis:1497

F6WLW9              	100.00%		H3CJ78              	100.00%
Bootstrap support for F6WLW9 as seed ortholog is 100%.
Bootstrap support for H3CJ78 as seed ortholog is 100%.

Group of orthologs #60. Best score 1495 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:1143

F6X211              	100.00%		H3D1K5              	100.00%
H2XSH4              	90.80%		H3D1Z8              	18.37%
H2XNA4              	87.73%		H3BZQ0              	15.94%
Bootstrap support for F6X211 as seed ortholog is 100%.
Bootstrap support for H3D1K5 as seed ortholog is 100%.

Group of orthologs #61. Best score 1493 bits
Score difference with first non-orthologous sequence - C.intestinalis:1493 T.nigroviridis:1493

F6TSV2              	100.00%		H3CF70              	100.00%
Bootstrap support for F6TSV2 as seed ortholog is 100%.
Bootstrap support for H3CF70 as seed ortholog is 100%.

Group of orthologs #62. Best score 1485 bits
Score difference with first non-orthologous sequence - C.intestinalis:1485 T.nigroviridis:990

F6PRC5              	100.00%		H3CWL5              	100.00%
Bootstrap support for F6PRC5 as seed ortholog is 100%.
Bootstrap support for H3CWL5 as seed ortholog is 100%.

Group of orthologs #63. Best score 1484 bits
Score difference with first non-orthologous sequence - C.intestinalis:1484 T.nigroviridis:1484

F6S0L5              	100.00%		H3C9R2              	100.00%
                    	       		H3CC39              	70.19%
Bootstrap support for F6S0L5 as seed ortholog is 100%.
Bootstrap support for H3C9R2 as seed ortholog is 100%.

Group of orthologs #64. Best score 1475 bits
Score difference with first non-orthologous sequence - C.intestinalis:1475 T.nigroviridis:1181

F6WXT4              	100.00%		H3CIF0              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for H3CIF0 as seed ortholog is 100%.

Group of orthologs #65. Best score 1474 bits
Score difference with first non-orthologous sequence - C.intestinalis:1474 T.nigroviridis:1474

F6ZJZ6              	100.00%		H3BWR5              	100.00%
Bootstrap support for F6ZJZ6 as seed ortholog is 100%.
Bootstrap support for H3BWR5 as seed ortholog is 100%.

Group of orthologs #66. Best score 1467 bits
Score difference with first non-orthologous sequence - C.intestinalis:1467 T.nigroviridis:779

F7B7Y1              	100.00%		H3DL65              	100.00%
Bootstrap support for F7B7Y1 as seed ortholog is 100%.
Bootstrap support for H3DL65 as seed ortholog is 100%.

Group of orthologs #67. Best score 1466 bits
Score difference with first non-orthologous sequence - C.intestinalis:1466 T.nigroviridis:1466

F6VJH0              	100.00%		H3C3X8              	100.00%
Bootstrap support for F6VJH0 as seed ortholog is 100%.
Bootstrap support for H3C3X8 as seed ortholog is 100%.

Group of orthologs #68. Best score 1461 bits
Score difference with first non-orthologous sequence - C.intestinalis:1461 T.nigroviridis:663

H2XWC3              	100.00%		H3D0Y8              	100.00%
F6X313              	14.91%		H3C6P9              	26.72%
Bootstrap support for H2XWC3 as seed ortholog is 100%.
Bootstrap support for H3D0Y8 as seed ortholog is 100%.

Group of orthologs #69. Best score 1461 bits
Score difference with first non-orthologous sequence - C.intestinalis:1461 T.nigroviridis:1461

F6TIR0              	100.00%		H3CJ20              	100.00%
Bootstrap support for F6TIR0 as seed ortholog is 100%.
Bootstrap support for H3CJ20 as seed ortholog is 100%.

Group of orthologs #70. Best score 1459 bits
Score difference with first non-orthologous sequence - C.intestinalis:1459 T.nigroviridis:1459

F6YN07              	100.00%		H3CUQ7              	100.00%
                    	       		H3CVX4              	29.29%
Bootstrap support for F6YN07 as seed ortholog is 100%.
Bootstrap support for H3CUQ7 as seed ortholog is 100%.

Group of orthologs #71. Best score 1456 bits
Score difference with first non-orthologous sequence - C.intestinalis:1456 T.nigroviridis:1456

F6XSF3              	100.00%		H3CIQ2              	100.00%
Bootstrap support for F6XSF3 as seed ortholog is 100%.
Bootstrap support for H3CIQ2 as seed ortholog is 100%.

Group of orthologs #72. Best score 1456 bits
Score difference with first non-orthologous sequence - C.intestinalis:1456 T.nigroviridis:1456

F6YD90              	100.00%		H3DLI2              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for H3DLI2 as seed ortholog is 100%.

Group of orthologs #73. Best score 1454 bits
Score difference with first non-orthologous sequence - C.intestinalis:1454 T.nigroviridis:1454

H2XU88              	100.00%		H3CVW1              	100.00%
                    	       		H3DH10              	25.84%
Bootstrap support for H2XU88 as seed ortholog is 100%.
Bootstrap support for H3CVW1 as seed ortholog is 100%.

Group of orthologs #74. Best score 1453 bits
Score difference with first non-orthologous sequence - C.intestinalis:1453 T.nigroviridis:1361

F6RZ17              	100.00%		H3BW94              	100.00%
Bootstrap support for F6RZ17 as seed ortholog is 100%.
Bootstrap support for H3BW94 as seed ortholog is 100%.

Group of orthologs #75. Best score 1453 bits
Score difference with first non-orthologous sequence - C.intestinalis:1453 T.nigroviridis:439

F6XL66              	100.00%		H3DKT0              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for H3DKT0 as seed ortholog is 100%.

Group of orthologs #76. Best score 1452 bits
Score difference with first non-orthologous sequence - C.intestinalis:1452 T.nigroviridis:1281

F6QI54              	100.00%		H3C4T4              	100.00%
Bootstrap support for F6QI54 as seed ortholog is 100%.
Bootstrap support for H3C4T4 as seed ortholog is 100%.

Group of orthologs #77. Best score 1443 bits
Score difference with first non-orthologous sequence - C.intestinalis:784 T.nigroviridis:617

F6VJG0              	100.00%		H3CIX4              	100.00%
                    	       		H3D8T7              	16.83%
Bootstrap support for F6VJG0 as seed ortholog is 100%.
Bootstrap support for H3CIX4 as seed ortholog is 100%.

Group of orthologs #78. Best score 1442 bits
Score difference with first non-orthologous sequence - C.intestinalis:1442 T.nigroviridis:1442

H2Y3E5              	100.00%		H3CK37              	100.00%
Bootstrap support for H2Y3E5 as seed ortholog is 100%.
Bootstrap support for H3CK37 as seed ortholog is 100%.

Group of orthologs #79. Best score 1435 bits
Score difference with first non-orthologous sequence - C.intestinalis:1126 T.nigroviridis:922

F6UYA6              	100.00%		H3C767              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for H3C767 as seed ortholog is 100%.

Group of orthologs #80. Best score 1428 bits
Score difference with first non-orthologous sequence - C.intestinalis:1428 T.nigroviridis:1428

F6UM75              	100.00%		H3DLB9              	100.00%
Bootstrap support for F6UM75 as seed ortholog is 100%.
Bootstrap support for H3DLB9 as seed ortholog is 100%.

Group of orthologs #81. Best score 1416 bits
Score difference with first non-orthologous sequence - C.intestinalis:1416 T.nigroviridis:1416

F6XUV4              	100.00%		H3DET6              	100.00%
Bootstrap support for F6XUV4 as seed ortholog is 100%.
Bootstrap support for H3DET6 as seed ortholog is 100%.

Group of orthologs #82. Best score 1409 bits
Score difference with first non-orthologous sequence - C.intestinalis:1409 T.nigroviridis:1409

F6WCR1              	100.00%		H3D242              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for H3D242 as seed ortholog is 100%.

Group of orthologs #83. Best score 1406 bits
Score difference with first non-orthologous sequence - C.intestinalis:1406 T.nigroviridis:1406

F7BKT8              	100.00%		H3D0I6              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for H3D0I6 as seed ortholog is 100%.

Group of orthologs #84. Best score 1399 bits
Score difference with first non-orthologous sequence - C.intestinalis:920 T.nigroviridis:954

F6Z6Y7              	100.00%		H3CAI1              	100.00%
                    	       		H3DJE1              	10.04%
Bootstrap support for F6Z6Y7 as seed ortholog is 100%.
Bootstrap support for H3CAI1 as seed ortholog is 100%.

Group of orthologs #85. Best score 1394 bits
Score difference with first non-orthologous sequence - C.intestinalis:1394 T.nigroviridis:1394

F7B9A9              	100.00%		H3BZP2              	100.00%
Bootstrap support for F7B9A9 as seed ortholog is 100%.
Bootstrap support for H3BZP2 as seed ortholog is 100%.

Group of orthologs #86. Best score 1378 bits
Score difference with first non-orthologous sequence - C.intestinalis:1378 T.nigroviridis:821

F6TIZ3              	100.00%		H3CB84              	100.00%
                    	       		H3CVC0              	31.92%
                    	       		H3BX42              	25.15%
Bootstrap support for F6TIZ3 as seed ortholog is 100%.
Bootstrap support for H3CB84 as seed ortholog is 100%.

Group of orthologs #87. Best score 1378 bits
Score difference with first non-orthologous sequence - C.intestinalis:1378 T.nigroviridis:1378

F6Z743              	100.00%		H3CVG4              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for H3CVG4 as seed ortholog is 100%.

Group of orthologs #88. Best score 1376 bits
Score difference with first non-orthologous sequence - C.intestinalis:1376 T.nigroviridis:1376

F6Z3V6              	100.00%		H3DGQ2              	100.00%
Bootstrap support for F6Z3V6 as seed ortholog is 100%.
Bootstrap support for H3DGQ2 as seed ortholog is 100%.

Group of orthologs #89. Best score 1360 bits
Score difference with first non-orthologous sequence - C.intestinalis:1360 T.nigroviridis:835

F6ZAQ4              	100.00%		H3C0Y1              	100.00%
Bootstrap support for F6ZAQ4 as seed ortholog is 100%.
Bootstrap support for H3C0Y1 as seed ortholog is 100%.

Group of orthologs #90. Best score 1359 bits
Score difference with first non-orthologous sequence - C.intestinalis:1359 T.nigroviridis:1359

F6TS15              	100.00%		H3CJW3              	100.00%
Bootstrap support for F6TS15 as seed ortholog is 100%.
Bootstrap support for H3CJW3 as seed ortholog is 100%.

Group of orthologs #91. Best score 1352 bits
Score difference with first non-orthologous sequence - C.intestinalis:1352 T.nigroviridis:931

F6RW91              	100.00%		H3CZJ4              	100.00%
                    	       		H3CNR9              	7.42%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for H3CZJ4 as seed ortholog is 100%.

Group of orthologs #92. Best score 1352 bits
Score difference with first non-orthologous sequence - C.intestinalis:1352 T.nigroviridis:1096

F6PJ70              	100.00%		H3DA64              	100.00%
Bootstrap support for F6PJ70 as seed ortholog is 100%.
Bootstrap support for H3DA64 as seed ortholog is 100%.

Group of orthologs #93. Best score 1349 bits
Score difference with first non-orthologous sequence - C.intestinalis:1349 T.nigroviridis:1349

H2XLC6              	100.00%		H3C6T3              	100.00%
                    	       		H3D8Z1              	16.13%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for H3C6T3 as seed ortholog is 100%.

Group of orthologs #94. Best score 1347 bits
Score difference with first non-orthologous sequence - C.intestinalis:1347 T.nigroviridis:1347

H2XQK9              	100.00%		H3C3S9              	100.00%
                    	       		H3D0H5              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for H3C3S9 as seed ortholog is 100%.
Bootstrap support for H3D0H5 as seed ortholog is 100%.

Group of orthologs #95. Best score 1345 bits
Score difference with first non-orthologous sequence - C.intestinalis:1345 T.nigroviridis:1345

F6YYG7              	100.00%		H3DDQ2              	100.00%
Bootstrap support for F6YYG7 as seed ortholog is 100%.
Bootstrap support for H3DDQ2 as seed ortholog is 100%.

Group of orthologs #96. Best score 1343 bits
Score difference with first non-orthologous sequence - C.intestinalis:1343 T.nigroviridis:1343

F6PKD1              	100.00%		H3CVE8              	100.00%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for H3CVE8 as seed ortholog is 100%.

Group of orthologs #97. Best score 1342 bits
Score difference with first non-orthologous sequence - C.intestinalis:1342 T.nigroviridis:918

F6VLN4              	100.00%		H3DD70              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for H3DD70 as seed ortholog is 100%.

Group of orthologs #98. Best score 1317 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 T.nigroviridis:1317

F6W0Y5              	100.00%		H3CM91              	100.00%
F6V519              	11.68%		
Bootstrap support for F6W0Y5 as seed ortholog is 100%.
Bootstrap support for H3CM91 as seed ortholog is 100%.

Group of orthologs #99. Best score 1313 bits
Score difference with first non-orthologous sequence - C.intestinalis:1313 T.nigroviridis:1313

F6W1H2              	100.00%		H3CG64              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for H3CG64 as seed ortholog is 100%.

Group of orthologs #100. Best score 1309 bits
Score difference with first non-orthologous sequence - C.intestinalis:1309 T.nigroviridis:1309

F6WQB5              	100.00%		H3CEY2              	100.00%
                    	       		H3CA34              	41.56%
Bootstrap support for F6WQB5 as seed ortholog is 100%.
Bootstrap support for H3CEY2 as seed ortholog is 100%.

Group of orthologs #101. Best score 1306 bits
Score difference with first non-orthologous sequence - C.intestinalis:1306 T.nigroviridis:462

F6U4V1              	100.00%		H3DC26              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for H3DC26 as seed ortholog is 100%.

Group of orthologs #102. Best score 1302 bits
Score difference with first non-orthologous sequence - C.intestinalis:1302 T.nigroviridis:1302

F7BJA3              	100.00%		H3DKI6              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for H3DKI6 as seed ortholog is 100%.

Group of orthologs #103. Best score 1299 bits
Score difference with first non-orthologous sequence - C.intestinalis:934 T.nigroviridis:519

F6SUU2              	100.00%		H3D0N5              	100.00%
Bootstrap support for F6SUU2 as seed ortholog is 100%.
Bootstrap support for H3D0N5 as seed ortholog is 100%.

Group of orthologs #104. Best score 1299 bits
Score difference with first non-orthologous sequence - C.intestinalis:1025 T.nigroviridis:854

H2XZZ5              	100.00%		H3D4J3              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for H3D4J3 as seed ortholog is 100%.

Group of orthologs #105. Best score 1298 bits
Score difference with first non-orthologous sequence - C.intestinalis:1298 T.nigroviridis:435

F6YWQ8              	100.00%		H3CI90              	100.00%
Bootstrap support for F6YWQ8 as seed ortholog is 100%.
Bootstrap support for H3CI90 as seed ortholog is 100%.

Group of orthologs #106. Best score 1294 bits
Score difference with first non-orthologous sequence - C.intestinalis:1294 T.nigroviridis:1294

F6V136              	100.00%		H3D943              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for H3D943 as seed ortholog is 100%.

Group of orthologs #107. Best score 1292 bits
Score difference with first non-orthologous sequence - C.intestinalis:1106 T.nigroviridis:91

F6PGX9              	100.00%		H3DGG8              	100.00%
Bootstrap support for F6PGX9 as seed ortholog is 100%.
Bootstrap support for H3DGG8 as seed ortholog is 92%.

Group of orthologs #108. Best score 1291 bits
Score difference with first non-orthologous sequence - C.intestinalis:1291 T.nigroviridis:360

F6UKS5              	100.00%		H3CIL9              	100.00%
Bootstrap support for F6UKS5 as seed ortholog is 100%.
Bootstrap support for H3CIL9 as seed ortholog is 100%.

Group of orthologs #109. Best score 1290 bits
Score difference with first non-orthologous sequence - C.intestinalis:1290 T.nigroviridis:1290

F6Y8C3              	100.00%		H3DF39              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for H3DF39 as seed ortholog is 100%.

Group of orthologs #110. Best score 1289 bits
Score difference with first non-orthologous sequence - C.intestinalis:1289 T.nigroviridis:1289

F6Z3T2              	100.00%		H3CLX5              	100.00%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for H3CLX5 as seed ortholog is 100%.

Group of orthologs #111. Best score 1289 bits
Score difference with first non-orthologous sequence - C.intestinalis:1289 T.nigroviridis:1289

F6VCT2              	100.00%		H3D2L1              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for H3D2L1 as seed ortholog is 100%.

Group of orthologs #112. Best score 1285 bits
Score difference with first non-orthologous sequence - C.intestinalis:1285 T.nigroviridis:1285

F6PV45              	100.00%		H3D766              	100.00%
                    	       		H3DPT3              	18.33%
                    	       		Q4SFP9              	17.71%
Bootstrap support for F6PV45 as seed ortholog is 100%.
Bootstrap support for H3D766 as seed ortholog is 100%.

Group of orthologs #113. Best score 1284 bits
Score difference with first non-orthologous sequence - C.intestinalis:1284 T.nigroviridis:1284

F6THF9              	100.00%		H3C9B4              	100.00%
Bootstrap support for F6THF9 as seed ortholog is 100%.
Bootstrap support for H3C9B4 as seed ortholog is 100%.

Group of orthologs #114. Best score 1283 bits
Score difference with first non-orthologous sequence - C.intestinalis:1283 T.nigroviridis:1283

H2Y1G0              	100.00%		H3CJI2              	100.00%
Bootstrap support for H2Y1G0 as seed ortholog is 100%.
Bootstrap support for H3CJI2 as seed ortholog is 100%.

Group of orthologs #115. Best score 1282 bits
Score difference with first non-orthologous sequence - C.intestinalis:1282 T.nigroviridis:1282

F6YKS6              	100.00%		H3CNN6              	100.00%
Bootstrap support for F6YKS6 as seed ortholog is 100%.
Bootstrap support for H3CNN6 as seed ortholog is 100%.

Group of orthologs #116. Best score 1282 bits
Score difference with first non-orthologous sequence - C.intestinalis:1282 T.nigroviridis:1282

H2XPG3              	100.00%		H3CE82              	100.00%
Bootstrap support for H2XPG3 as seed ortholog is 100%.
Bootstrap support for H3CE82 as seed ortholog is 100%.

Group of orthologs #117. Best score 1274 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 T.nigroviridis:481

F6YGU8              	100.00%		H3DBI8              	100.00%
Bootstrap support for F6YGU8 as seed ortholog is 100%.
Bootstrap support for H3DBI8 as seed ortholog is 100%.

Group of orthologs #118. Best score 1273 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 T.nigroviridis:285

F6ZHQ8              	100.00%		H3DE69              	100.00%
Bootstrap support for F6ZHQ8 as seed ortholog is 100%.
Bootstrap support for H3DE69 as seed ortholog is 99%.

Group of orthologs #119. Best score 1270 bits
Score difference with first non-orthologous sequence - C.intestinalis:1270 T.nigroviridis:869

F6W1V5              	100.00%		H3C216              	100.00%
                    	       		H3DKM0              	12.29%
                    	       		H3DKL9              	9.31%
Bootstrap support for F6W1V5 as seed ortholog is 100%.
Bootstrap support for H3C216 as seed ortholog is 100%.

Group of orthologs #120. Best score 1269 bits
Score difference with first non-orthologous sequence - C.intestinalis:1003 T.nigroviridis:970

F6W1I6              	100.00%		H3CML9              	100.00%
                    	       		H3C789              	39.90%
                    	       		H3DBG2              	23.96%
Bootstrap support for F6W1I6 as seed ortholog is 100%.
Bootstrap support for H3CML9 as seed ortholog is 100%.

Group of orthologs #121. Best score 1268 bits
Score difference with first non-orthologous sequence - C.intestinalis:1268 T.nigroviridis:327

F6R8H4              	100.00%		H3DJB2              	100.00%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for H3DJB2 as seed ortholog is 100%.

Group of orthologs #122. Best score 1267 bits
Score difference with first non-orthologous sequence - C.intestinalis:1267 T.nigroviridis:286

F6USW1              	100.00%		H3CWK0              	100.00%
Bootstrap support for F6USW1 as seed ortholog is 100%.
Bootstrap support for H3CWK0 as seed ortholog is 99%.

Group of orthologs #123. Best score 1260 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 T.nigroviridis:360

F6WTL7              	100.00%		H3CIX1              	100.00%
Bootstrap support for F6WTL7 as seed ortholog is 100%.
Bootstrap support for H3CIX1 as seed ortholog is 99%.

Group of orthologs #124. Best score 1257 bits
Score difference with first non-orthologous sequence - C.intestinalis:1257 T.nigroviridis:1257

F7AB73              	100.00%		H3D5K7              	100.00%
Bootstrap support for F7AB73 as seed ortholog is 100%.
Bootstrap support for H3D5K7 as seed ortholog is 100%.

Group of orthologs #125. Best score 1254 bits
Score difference with first non-orthologous sequence - C.intestinalis:1254 T.nigroviridis:1254

F6WUJ1              	100.00%		H3CZ11              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for H3CZ11 as seed ortholog is 100%.

Group of orthologs #126. Best score 1253 bits
Score difference with first non-orthologous sequence - C.intestinalis:1253 T.nigroviridis:285

F6SQF6              	100.00%		H3CWW5              	100.00%
Bootstrap support for F6SQF6 as seed ortholog is 100%.
Bootstrap support for H3CWW5 as seed ortholog is 100%.

Group of orthologs #127. Best score 1239 bits
Score difference with first non-orthologous sequence - C.intestinalis:1239 T.nigroviridis:1081

F7ABF6              	100.00%		H3CL14              	100.00%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for H3CL14 as seed ortholog is 100%.

Group of orthologs #128. Best score 1238 bits
Score difference with first non-orthologous sequence - C.intestinalis:1238 T.nigroviridis:1065

F6YK55              	100.00%		H3DK65              	100.00%
                    	       		H3D3H8              	39.65%
                    	       		H3CLG2              	36.94%
                    	       		H3CAB7              	24.56%
Bootstrap support for F6YK55 as seed ortholog is 100%.
Bootstrap support for H3DK65 as seed ortholog is 100%.

Group of orthologs #129. Best score 1238 bits
Score difference with first non-orthologous sequence - C.intestinalis:1238 T.nigroviridis:1238

F6VGC6              	100.00%		H3DAW8              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for H3DAW8 as seed ortholog is 100%.

Group of orthologs #130. Best score 1237 bits
Score difference with first non-orthologous sequence - C.intestinalis:1237 T.nigroviridis:1237

F6QRG3              	100.00%		H3DJF3              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for H3DJF3 as seed ortholog is 100%.

Group of orthologs #131. Best score 1234 bits
Score difference with first non-orthologous sequence - C.intestinalis:869 T.nigroviridis:972

F6TZX4              	100.00%		H3DF97              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for H3DF97 as seed ortholog is 100%.

Group of orthologs #132. Best score 1233 bits
Score difference with first non-orthologous sequence - C.intestinalis:1233 T.nigroviridis:1233

H2XVQ2              	100.00%		H3C102              	100.00%
                    	       		H3DFV8              	7.04%
Bootstrap support for H2XVQ2 as seed ortholog is 100%.
Bootstrap support for H3C102 as seed ortholog is 100%.

Group of orthologs #133. Best score 1232 bits
Score difference with first non-orthologous sequence - C.intestinalis:1029 T.nigroviridis:806

F6TIJ9              	100.00%		H3CNV3              	100.00%
                    	       		H3CUM5              	25.18%
Bootstrap support for F6TIJ9 as seed ortholog is 100%.
Bootstrap support for H3CNV3 as seed ortholog is 100%.

Group of orthologs #134. Best score 1232 bits
Score difference with first non-orthologous sequence - C.intestinalis:1232 T.nigroviridis:1232

F6UDK5              	100.00%		H3C394              	100.00%
Bootstrap support for F6UDK5 as seed ortholog is 100%.
Bootstrap support for H3C394 as seed ortholog is 100%.

Group of orthologs #135. Best score 1231 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:63

F6WVU8              	100.00%		H3C2N6              	100.00%
Bootstrap support for F6WVU8 as seed ortholog is 99%.
Bootstrap support for H3C2N6 as seed ortholog is 79%.

Group of orthologs #136. Best score 1230 bits
Score difference with first non-orthologous sequence - C.intestinalis:1230 T.nigroviridis:1230

F6QXZ7              	100.00%		H3D1X3              	100.00%
Bootstrap support for F6QXZ7 as seed ortholog is 100%.
Bootstrap support for H3D1X3 as seed ortholog is 100%.

Group of orthologs #137. Best score 1222 bits
Score difference with first non-orthologous sequence - C.intestinalis:1222 T.nigroviridis:729

F6R6F3              	100.00%		H3BZ88              	100.00%
                    	       		H3CU32              	28.49%
                    	       		H3D439              	21.20%
Bootstrap support for F6R6F3 as seed ortholog is 100%.
Bootstrap support for H3BZ88 as seed ortholog is 100%.

Group of orthologs #138. Best score 1219 bits
Score difference with first non-orthologous sequence - C.intestinalis:1002 T.nigroviridis:1042

F6PP79              	100.00%		H3DBE7              	100.00%
Bootstrap support for F6PP79 as seed ortholog is 100%.
Bootstrap support for H3DBE7 as seed ortholog is 100%.

Group of orthologs #139. Best score 1218 bits
Score difference with first non-orthologous sequence - C.intestinalis:1218 T.nigroviridis:750

F6UY41              	100.00%		H3CAV7              	100.00%
Bootstrap support for F6UY41 as seed ortholog is 100%.
Bootstrap support for H3CAV7 as seed ortholog is 100%.

Group of orthologs #140. Best score 1216 bits
Score difference with first non-orthologous sequence - C.intestinalis:1216 T.nigroviridis:944

F6RUN6              	100.00%		H3D2I6              	100.00%
                    	       		H3C5M7              	17.96%
                    	       		H3CA43              	17.53%
Bootstrap support for F6RUN6 as seed ortholog is 100%.
Bootstrap support for H3D2I6 as seed ortholog is 100%.

Group of orthologs #141. Best score 1216 bits
Score difference with first non-orthologous sequence - C.intestinalis:1216 T.nigroviridis:1012

Q1RQ01              	100.00%		H3CD72              	100.00%
Bootstrap support for Q1RQ01 as seed ortholog is 100%.
Bootstrap support for H3CD72 as seed ortholog is 100%.

Group of orthologs #142. Best score 1213 bits
Score difference with first non-orthologous sequence - C.intestinalis:1213 T.nigroviridis:964

F6V993              	100.00%		H3C8S3              	100.00%
                    	       		H3DPB6              	20.94%
Bootstrap support for F6V993 as seed ortholog is 100%.
Bootstrap support for H3C8S3 as seed ortholog is 100%.

Group of orthologs #143. Best score 1212 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 T.nigroviridis:1143

F6VWX8              	100.00%		H3DJ86              	100.00%
                    	       		H3DGQ1              	7.81%
Bootstrap support for F6VWX8 as seed ortholog is 100%.
Bootstrap support for H3DJ86 as seed ortholog is 100%.

Group of orthologs #144. Best score 1211 bits
Score difference with first non-orthologous sequence - C.intestinalis:1211 T.nigroviridis:1211

H2XNV5              	100.00%		H3DI04              	100.00%
                    	       		H3CN07              	48.32%
                    	       		H3D9V0              	22.32%
Bootstrap support for H2XNV5 as seed ortholog is 100%.
Bootstrap support for H3DI04 as seed ortholog is 100%.

Group of orthologs #145. Best score 1210 bits
Score difference with first non-orthologous sequence - C.intestinalis:1210 T.nigroviridis:1210

F6VBD5              	100.00%		H3CWI6              	100.00%
Bootstrap support for F6VBD5 as seed ortholog is 100%.
Bootstrap support for H3CWI6 as seed ortholog is 100%.

Group of orthologs #146. Best score 1209 bits
Score difference with first non-orthologous sequence - C.intestinalis:1209 T.nigroviridis:1209

H2Y0S6              	100.00%		H3CLV6              	100.00%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for H3CLV6 as seed ortholog is 100%.

Group of orthologs #147. Best score 1207 bits
Score difference with first non-orthologous sequence - C.intestinalis:1207 T.nigroviridis:1207

F6U9F4              	100.00%		H3CI89              	100.00%
Bootstrap support for F6U9F4 as seed ortholog is 100%.
Bootstrap support for H3CI89 as seed ortholog is 100%.

Group of orthologs #148. Best score 1199 bits
Score difference with first non-orthologous sequence - C.intestinalis:1199 T.nigroviridis:751

F6S181              	100.00%		H3CAK8              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for H3CAK8 as seed ortholog is 100%.

Group of orthologs #149. Best score 1196 bits
Score difference with first non-orthologous sequence - C.intestinalis:1196 T.nigroviridis:691

F7BBP3              	100.00%		H3DDC7              	100.00%
Bootstrap support for F7BBP3 as seed ortholog is 100%.
Bootstrap support for H3DDC7 as seed ortholog is 100%.

Group of orthologs #150. Best score 1193 bits
Score difference with first non-orthologous sequence - C.intestinalis:1193 T.nigroviridis:1193

F6YGJ7              	100.00%		H3D231              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for H3D231 as seed ortholog is 100%.

Group of orthologs #151. Best score 1181 bits
Score difference with first non-orthologous sequence - C.intestinalis:1181 T.nigroviridis:1181

F6QIX3              	100.00%		H3CDG6              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for H3CDG6 as seed ortholog is 100%.

Group of orthologs #152. Best score 1180 bits
Score difference with first non-orthologous sequence - C.intestinalis:1180 T.nigroviridis:1180

H2Y1Y9              	100.00%		H3DP53              	100.00%
Bootstrap support for H2Y1Y9 as seed ortholog is 100%.
Bootstrap support for H3DP53 as seed ortholog is 100%.

Group of orthologs #153. Best score 1178 bits
Score difference with first non-orthologous sequence - C.intestinalis:947 T.nigroviridis:451

F6T8N6              	100.00%		H3CKT2              	100.00%
                    	       		H3CYA6              	32.09%
                    	       		H3DQA7              	18.44%
Bootstrap support for F6T8N6 as seed ortholog is 100%.
Bootstrap support for H3CKT2 as seed ortholog is 100%.

Group of orthologs #154. Best score 1175 bits
Score difference with first non-orthologous sequence - C.intestinalis:1175 T.nigroviridis:1175

F6SFQ0              	100.00%		H3CMU6              	100.00%
                    	       		H3CNP2              	13.51%
                    	       		H3D4N6              	9.91%
Bootstrap support for F6SFQ0 as seed ortholog is 100%.
Bootstrap support for H3CMU6 as seed ortholog is 100%.

Group of orthologs #155. Best score 1174 bits
Score difference with first non-orthologous sequence - C.intestinalis:1174 T.nigroviridis:1174

F6XC92              	100.00%		H3CF52              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for H3CF52 as seed ortholog is 100%.

Group of orthologs #156. Best score 1170 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:483

H2XS32              	100.00%		H3DDW4              	100.00%
                    	       		H3CAA4              	37.86%
                    	       		H3C900              	21.62%
Bootstrap support for H2XS32 as seed ortholog is 99%.
Bootstrap support for H3DDW4 as seed ortholog is 100%.

Group of orthologs #157. Best score 1166 bits
Score difference with first non-orthologous sequence - C.intestinalis:1166 T.nigroviridis:1166

H2XJF3              	100.00%		H3CSF2              	100.00%
Bootstrap support for H2XJF3 as seed ortholog is 100%.
Bootstrap support for H3CSF2 as seed ortholog is 100%.

Group of orthologs #158. Best score 1164 bits
Score difference with first non-orthologous sequence - C.intestinalis:1164 T.nigroviridis:761

F6YY38              	100.00%		H3CX45              	100.00%
                    	       		H3CNT4              	17.80%
Bootstrap support for F6YY38 as seed ortholog is 100%.
Bootstrap support for H3CX45 as seed ortholog is 100%.

Group of orthologs #159. Best score 1164 bits
Score difference with first non-orthologous sequence - C.intestinalis:1164 T.nigroviridis:1082

F6U8H5              	100.00%		H3D5J8              	100.00%
Bootstrap support for F6U8H5 as seed ortholog is 100%.
Bootstrap support for H3D5J8 as seed ortholog is 100%.

Group of orthologs #160. Best score 1164 bits
Score difference with first non-orthologous sequence - C.intestinalis:1164 T.nigroviridis:887

F6SI15              	100.00%		H3DGR4              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for H3DGR4 as seed ortholog is 100%.

Group of orthologs #161. Best score 1164 bits
Score difference with first non-orthologous sequence - C.intestinalis:1164 T.nigroviridis:991

H2XN51              	100.00%		H3D171              	100.00%
Bootstrap support for H2XN51 as seed ortholog is 100%.
Bootstrap support for H3D171 as seed ortholog is 100%.

Group of orthologs #162. Best score 1160 bits
Score difference with first non-orthologous sequence - C.intestinalis:1160 T.nigroviridis:1033

F6R4B5              	100.00%		H3CSP9              	100.00%
                    	       		H3D7I0              	6.06%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for H3CSP9 as seed ortholog is 100%.

Group of orthologs #163. Best score 1160 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 T.nigroviridis:923

F6SMQ3              	100.00%		H3DI89              	100.00%
F6R222              	20.15%		
Bootstrap support for F6SMQ3 as seed ortholog is 100%.
Bootstrap support for H3DI89 as seed ortholog is 100%.

Group of orthologs #164. Best score 1154 bits
Score difference with first non-orthologous sequence - C.intestinalis:1154 T.nigroviridis:1154

F6VSQ8              	100.00%		H3DE79              	100.00%
Bootstrap support for F6VSQ8 as seed ortholog is 100%.
Bootstrap support for H3DE79 as seed ortholog is 100%.

Group of orthologs #165. Best score 1153 bits
Score difference with first non-orthologous sequence - C.intestinalis:1153 T.nigroviridis:1153

F6ZZL8              	100.00%		H3CGN0              	100.00%
                    	       		H3D1G3              	28.34%
                    	       		H3CPA0              	17.56%
                    	       		H3C0Q9              	15.50%
Bootstrap support for F6ZZL8 as seed ortholog is 100%.
Bootstrap support for H3CGN0 as seed ortholog is 100%.

Group of orthologs #166. Best score 1152 bits
Score difference with first non-orthologous sequence - C.intestinalis:1152 T.nigroviridis:1152

F6R7T5              	100.00%		H3D5Y4              	100.00%
                    	       		H3D9B5              	16.62%
Bootstrap support for F6R7T5 as seed ortholog is 100%.
Bootstrap support for H3D5Y4 as seed ortholog is 100%.

Group of orthologs #167. Best score 1145 bits
Score difference with first non-orthologous sequence - C.intestinalis:1145 T.nigroviridis:1145

F6U7R9              	100.00%		H3CU51              	100.00%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for H3CU51 as seed ortholog is 100%.

Group of orthologs #168. Best score 1142 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 T.nigroviridis:892

H2XVU8              	100.00%		H3DGV7              	100.00%
                    	       		H3D4B3              	15.25%
Bootstrap support for H2XVU8 as seed ortholog is 100%.
Bootstrap support for H3DGV7 as seed ortholog is 100%.

Group of orthologs #169. Best score 1140 bits
Score difference with first non-orthologous sequence - C.intestinalis:1140 T.nigroviridis:1140

F7ANR5              	100.00%		H3CW04              	100.00%
Bootstrap support for F7ANR5 as seed ortholog is 100%.
Bootstrap support for H3CW04 as seed ortholog is 100%.

Group of orthologs #170. Best score 1138 bits
Score difference with first non-orthologous sequence - C.intestinalis:1138 T.nigroviridis:1138

H2XKA9              	100.00%		H3D0S7              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for H3D0S7 as seed ortholog is 100%.

Group of orthologs #171. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:1137 T.nigroviridis:313

H2Y089              	100.00%		H3CXY4              	100.00%
                    	       		H3CE21              	23.42%
                    	       		H3BVY3              	7.42%
Bootstrap support for H2Y089 as seed ortholog is 100%.
Bootstrap support for H3CXY4 as seed ortholog is 99%.

Group of orthologs #172. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 T.nigroviridis:1137

H2Y1Z9              	100.00%		H3CEF1              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for H3CEF1 as seed ortholog is 100%.

Group of orthologs #173. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:1137 T.nigroviridis:1137

H2XQI5              	100.00%		H3CZV5              	100.00%
Bootstrap support for H2XQI5 as seed ortholog is 100%.
Bootstrap support for H3CZV5 as seed ortholog is 100%.

Group of orthologs #174. Best score 1134 bits
Score difference with first non-orthologous sequence - C.intestinalis:1134 T.nigroviridis:567

F6SUT6              	100.00%		H3D7J7              	100.00%
                    	       		H3CXS6              	24.51%
Bootstrap support for F6SUT6 as seed ortholog is 100%.
Bootstrap support for H3D7J7 as seed ortholog is 100%.

Group of orthologs #175. Best score 1133 bits
Score difference with first non-orthologous sequence - C.intestinalis:1133 T.nigroviridis:881

H2XLC2              	100.00%		H3DEJ4              	100.00%
                    	       		H3CQC6              	55.89%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for H3DEJ4 as seed ortholog is 100%.

Group of orthologs #176. Best score 1133 bits
Score difference with first non-orthologous sequence - C.intestinalis:1133 T.nigroviridis:1133

F6ZN98              	100.00%		H3CN87              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for H3CN87 as seed ortholog is 100%.

Group of orthologs #177. Best score 1132 bits
Score difference with first non-orthologous sequence - C.intestinalis:1132 T.nigroviridis:687

F6Z5E6              	100.00%		H3CCI0              	100.00%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for H3CCI0 as seed ortholog is 100%.

Group of orthologs #178. Best score 1126 bits
Score difference with first non-orthologous sequence - C.intestinalis:760 T.nigroviridis:480

F6QYE3              	100.00%		H3D2L4              	100.00%
                    	       		H3DEN5              	6.39%
Bootstrap support for F6QYE3 as seed ortholog is 100%.
Bootstrap support for H3D2L4 as seed ortholog is 100%.

Group of orthologs #179. Best score 1122 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:91

F6W8I3              	100.00%		Q4SL93              	100.00%
                    	       		H3DM99              	33.33%
Bootstrap support for F6W8I3 as seed ortholog is 100%.
Bootstrap support for Q4SL93 as seed ortholog is 99%.

Group of orthologs #180. Best score 1118 bits
Score difference with first non-orthologous sequence - C.intestinalis:1118 T.nigroviridis:177

F6VF77              	100.00%		H3D9B9              	100.00%
                    	       		H3CR03              	26.17%
Bootstrap support for F6VF77 as seed ortholog is 100%.
Bootstrap support for H3D9B9 as seed ortholog is 99%.

Group of orthologs #181. Best score 1118 bits
Score difference with first non-orthologous sequence - C.intestinalis:1118 T.nigroviridis:1118

F6SWL4              	100.00%		H3CEF8              	100.00%
Bootstrap support for F6SWL4 as seed ortholog is 100%.
Bootstrap support for H3CEF8 as seed ortholog is 100%.

Group of orthologs #182. Best score 1116 bits
Score difference with first non-orthologous sequence - C.intestinalis:1116 T.nigroviridis:1116

H2XKD5              	100.00%		H3D3F0              	100.00%
                    	       		H3CA68              	21.68%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for H3D3F0 as seed ortholog is 100%.

Group of orthologs #183. Best score 1112 bits
Score difference with first non-orthologous sequence - C.intestinalis:1112 T.nigroviridis:1037

F6RMU1              	100.00%		H3CLY3              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for H3CLY3 as seed ortholog is 100%.

Group of orthologs #184. Best score 1109 bits
Score difference with first non-orthologous sequence - C.intestinalis:1109 T.nigroviridis:430

F6UHM2              	100.00%		H3D987              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for H3D987 as seed ortholog is 100%.

Group of orthologs #185. Best score 1105 bits
Score difference with first non-orthologous sequence - C.intestinalis:1105 T.nigroviridis:813

F6PW28              	100.00%		H3CA40              	100.00%
Bootstrap support for F6PW28 as seed ortholog is 100%.
Bootstrap support for H3CA40 as seed ortholog is 100%.

Group of orthologs #186. Best score 1104 bits
Score difference with first non-orthologous sequence - C.intestinalis:1104 T.nigroviridis:1104

H2XNV6              	100.00%		H3DMN3              	100.00%
Bootstrap support for H2XNV6 as seed ortholog is 100%.
Bootstrap support for H3DMN3 as seed ortholog is 100%.

Group of orthologs #187. Best score 1102 bits
Score difference with first non-orthologous sequence - C.intestinalis:1102 T.nigroviridis:774

F6S6B2              	100.00%		H3C8R9              	100.00%
                    	       		H3CDZ8              	6.05%
Bootstrap support for F6S6B2 as seed ortholog is 100%.
Bootstrap support for H3C8R9 as seed ortholog is 100%.

Group of orthologs #188. Best score 1101 bits
Score difference with first non-orthologous sequence - C.intestinalis:1101 T.nigroviridis:971

F7BIU1              	100.00%		H3DGM7              	100.00%
                    	       		H3CNF9              	26.68%
Bootstrap support for F7BIU1 as seed ortholog is 100%.
Bootstrap support for H3DGM7 as seed ortholog is 100%.

Group of orthologs #189. Best score 1099 bits
Score difference with first non-orthologous sequence - C.intestinalis:1099 T.nigroviridis:819

F6RKM9              	100.00%		H3CR41              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for H3CR41 as seed ortholog is 100%.

Group of orthologs #190. Best score 1093 bits
Score difference with first non-orthologous sequence - C.intestinalis:1093 T.nigroviridis:661

F6QSR3              	100.00%		H3DFT7              	100.00%
Bootstrap support for F6QSR3 as seed ortholog is 100%.
Bootstrap support for H3DFT7 as seed ortholog is 100%.

Group of orthologs #191. Best score 1092 bits
Score difference with first non-orthologous sequence - C.intestinalis:1092 T.nigroviridis:1092

F6TQ69              	100.00%		H3CVF3              	100.00%
                    	       		H3CP43              	11.02%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for H3CVF3 as seed ortholog is 100%.

Group of orthologs #192. Best score 1089 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 T.nigroviridis:655

F6WRK8              	100.00%		H3C683              	100.00%
                    	       		H3D867              	24.32%
                    	       		H3CXZ7              	15.75%
Bootstrap support for F6WRK8 as seed ortholog is 100%.
Bootstrap support for H3C683 as seed ortholog is 100%.

Group of orthologs #193. Best score 1085 bits
Score difference with first non-orthologous sequence - C.intestinalis:1085 T.nigroviridis:1085

F6SPZ6              	100.00%		H3CFS8              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for H3CFS8 as seed ortholog is 100%.

Group of orthologs #194. Best score 1080 bits
Score difference with first non-orthologous sequence - C.intestinalis:1080 T.nigroviridis:1080

F6TML4              	100.00%		H3CIS0              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for H3CIS0 as seed ortholog is 100%.

Group of orthologs #195. Best score 1077 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 T.nigroviridis:172

F6SH00              	100.00%		H3CU53              	100.00%
Bootstrap support for F6SH00 as seed ortholog is 100%.
Bootstrap support for H3CU53 as seed ortholog is 99%.

Group of orthologs #196. Best score 1076 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:1076

F6WKG4              	100.00%		H3D858              	100.00%
F6XBM6              	19.06%		
F7B363              	7.77%		
Bootstrap support for F6WKG4 as seed ortholog is 100%.
Bootstrap support for H3D858 as seed ortholog is 100%.

Group of orthologs #197. Best score 1069 bits
Score difference with first non-orthologous sequence - C.intestinalis:1069 T.nigroviridis:88

F6TCT1              	100.00%		H3DAN4              	100.00%
                    	       		H3D6X6              	48.22%
                    	       		H3DJN0              	34.72%
Bootstrap support for F6TCT1 as seed ortholog is 100%.
Bootstrap support for H3DAN4 as seed ortholog is 91%.

Group of orthologs #198. Best score 1067 bits
Score difference with first non-orthologous sequence - C.intestinalis:1067 T.nigroviridis:418

F6W6J2              	100.00%		H3DI28              	100.00%
Bootstrap support for F6W6J2 as seed ortholog is 100%.
Bootstrap support for H3DI28 as seed ortholog is 100%.

Group of orthologs #199. Best score 1064 bits
Score difference with first non-orthologous sequence - C.intestinalis:1064 T.nigroviridis:1064

F6Q0D8              	100.00%		H3C169              	100.00%
Bootstrap support for F6Q0D8 as seed ortholog is 100%.
Bootstrap support for H3C169 as seed ortholog is 100%.

Group of orthologs #200. Best score 1063 bits
Score difference with first non-orthologous sequence - C.intestinalis:1063 T.nigroviridis:772

H2XJF2              	100.00%		H3DNZ6              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for H3DNZ6 as seed ortholog is 100%.

Group of orthologs #201. Best score 1061 bits
Score difference with first non-orthologous sequence - C.intestinalis:1061 T.nigroviridis:1061

F6UXR3              	100.00%		H3D9X5              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for H3D9X5 as seed ortholog is 100%.

Group of orthologs #202. Best score 1059 bits
Score difference with first non-orthologous sequence - C.intestinalis:785 T.nigroviridis:585

F6Q5T5              	100.00%		H3DES8              	100.00%
                    	       		H3CW01              	12.57%
Bootstrap support for F6Q5T5 as seed ortholog is 100%.
Bootstrap support for H3DES8 as seed ortholog is 100%.

Group of orthologs #203. Best score 1059 bits
Score difference with first non-orthologous sequence - C.intestinalis:1059 T.nigroviridis:1059

H2XTU1              	100.00%		H3CGJ5              	100.00%
Bootstrap support for H2XTU1 as seed ortholog is 100%.
Bootstrap support for H3CGJ5 as seed ortholog is 100%.

Group of orthologs #204. Best score 1058 bits
Score difference with first non-orthologous sequence - C.intestinalis:1058 T.nigroviridis:1058

F6ULY5              	100.00%		H3DIZ5              	100.00%
Bootstrap support for F6ULY5 as seed ortholog is 100%.
Bootstrap support for H3DIZ5 as seed ortholog is 100%.

Group of orthologs #205. Best score 1057 bits
Score difference with first non-orthologous sequence - C.intestinalis:1057 T.nigroviridis:190

H2XTN7              	100.00%		H3CBS5              	100.00%
Bootstrap support for H2XTN7 as seed ortholog is 100%.
Bootstrap support for H3CBS5 as seed ortholog is 99%.

Group of orthologs #206. Best score 1055 bits
Score difference with first non-orthologous sequence - C.intestinalis:1055 T.nigroviridis:768

F6Z4G6              	100.00%		H3DPC1              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for H3DPC1 as seed ortholog is 100%.

Group of orthologs #207. Best score 1043 bits
Score difference with first non-orthologous sequence - C.intestinalis:1043 T.nigroviridis:615

H2XL55              	100.00%		H3DI20              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 100%.
Bootstrap support for H3DI20 as seed ortholog is 100%.

Group of orthologs #208. Best score 1042 bits
Score difference with first non-orthologous sequence - C.intestinalis:1042 T.nigroviridis:226

F6R356              	100.00%		H3DQ98              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for H3DQ98 as seed ortholog is 99%.

Group of orthologs #209. Best score 1040 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 T.nigroviridis:706

H2XRP2              	100.00%		H3CIK2              	100.00%
Bootstrap support for H2XRP2 as seed ortholog is 100%.
Bootstrap support for H3CIK2 as seed ortholog is 100%.

Group of orthologs #210. Best score 1039 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:257

F6SXM4              	100.00%		H3DN28              	100.00%
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for H3DN28 as seed ortholog is 100%.

Group of orthologs #211. Best score 1037 bits
Score difference with first non-orthologous sequence - C.intestinalis:847 T.nigroviridis:333

F6V2Z5              	100.00%		H3CLC0              	100.00%
Bootstrap support for F6V2Z5 as seed ortholog is 100%.
Bootstrap support for H3CLC0 as seed ortholog is 99%.

Group of orthologs #212. Best score 1034 bits
Score difference with first non-orthologous sequence - C.intestinalis:1034 T.nigroviridis:1034

F6US09              	100.00%		H3CJS1              	100.00%
                    	       		H3CVT6              	15.89%
Bootstrap support for F6US09 as seed ortholog is 100%.
Bootstrap support for H3CJS1 as seed ortholog is 100%.

Group of orthologs #213. Best score 1031 bits
Score difference with first non-orthologous sequence - C.intestinalis:1031 T.nigroviridis:1031

F7ADN1              	100.00%		H3CQJ0              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for H3CQJ0 as seed ortholog is 100%.

Group of orthologs #214. Best score 1030 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 T.nigroviridis:1030

H2XSM0              	100.00%		H3CZE5              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 100%.
Bootstrap support for H3CZE5 as seed ortholog is 100%.

Group of orthologs #215. Best score 1029 bits
Score difference with first non-orthologous sequence - C.intestinalis:1029 T.nigroviridis:698

F6PQW3              	100.00%		H3DG18              	100.00%
                    	       		H3CS81              	35.86%
Bootstrap support for F6PQW3 as seed ortholog is 100%.
Bootstrap support for H3DG18 as seed ortholog is 100%.

Group of orthologs #216. Best score 1027 bits
Score difference with first non-orthologous sequence - C.intestinalis:1027 T.nigroviridis:1027

H2XV68              	100.00%		H3D2T4              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for H3D2T4 as seed ortholog is 100%.

Group of orthologs #217. Best score 1025 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 T.nigroviridis:906

F6V1Q0              	100.00%		H3CWS0              	100.00%
                    	       		H3CI94              	23.03%
                    	       		H3CWS1              	21.72%
                    	       		H3D8J9              	20.29%
                    	       		H3D9V1              	15.99%
Bootstrap support for F6V1Q0 as seed ortholog is 100%.
Bootstrap support for H3CWS0 as seed ortholog is 100%.

Group of orthologs #218. Best score 1025 bits
Score difference with first non-orthologous sequence - C.intestinalis:927 T.nigroviridis:1025

H2XJT5              	100.00%		H3CXD7              	100.00%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for H3CXD7 as seed ortholog is 100%.

Group of orthologs #219. Best score 1024 bits
Score difference with first non-orthologous sequence - C.intestinalis:1024 T.nigroviridis:1024

F6U4L6              	100.00%		H3CFI9              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for H3CFI9 as seed ortholog is 100%.

Group of orthologs #220. Best score 1022 bits
Score difference with first non-orthologous sequence - C.intestinalis:1022 T.nigroviridis:191

F6QIR4              	100.00%		H3CNC6              	100.00%
                    	       		H3C9L4              	16.26%
Bootstrap support for F6QIR4 as seed ortholog is 100%.
Bootstrap support for H3CNC6 as seed ortholog is 99%.

Group of orthologs #221. Best score 1022 bits
Score difference with first non-orthologous sequence - C.intestinalis:925 T.nigroviridis:819

F6Q5K0              	100.00%		H3CUC8              	100.00%
Bootstrap support for F6Q5K0 as seed ortholog is 100%.
Bootstrap support for H3CUC8 as seed ortholog is 100%.

Group of orthologs #222. Best score 1015 bits
Score difference with first non-orthologous sequence - C.intestinalis:1015 T.nigroviridis:627

F6XHQ2              	100.00%		H3CLM9              	100.00%
                    	       		H3D180              	9.37%
Bootstrap support for F6XHQ2 as seed ortholog is 100%.
Bootstrap support for H3CLM9 as seed ortholog is 100%.

Group of orthologs #223. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:1012 T.nigroviridis:1012

F6ZZJ8              	100.00%		H3CHD5              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for H3CHD5 as seed ortholog is 100%.

Group of orthologs #224. Best score 1011 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:1011

F6XU15              	100.00%		H3CLW3              	100.00%
                    	       		H3D8I3              	46.29%
Bootstrap support for F6XU15 as seed ortholog is 99%.
Bootstrap support for H3CLW3 as seed ortholog is 100%.

Group of orthologs #225. Best score 1009 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 T.nigroviridis:578

F6YUT1              	100.00%		H3CLC5              	100.00%
Bootstrap support for F6YUT1 as seed ortholog is 100%.
Bootstrap support for H3CLC5 as seed ortholog is 100%.

Group of orthologs #226. Best score 1009 bits
Score difference with first non-orthologous sequence - C.intestinalis:1009 T.nigroviridis:1009

F6XKY1              	100.00%		H3CZ59              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for H3CZ59 as seed ortholog is 100%.

Group of orthologs #227. Best score 1007 bits
Score difference with first non-orthologous sequence - C.intestinalis:937 T.nigroviridis:1007

F6UE02              	100.00%		H3CZE3              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for H3CZE3 as seed ortholog is 100%.

Group of orthologs #228. Best score 1005 bits
Score difference with first non-orthologous sequence - C.intestinalis:1005 T.nigroviridis:1005

F6TNP4              	100.00%		H3DET8              	100.00%
Bootstrap support for F6TNP4 as seed ortholog is 100%.
Bootstrap support for H3DET8 as seed ortholog is 100%.

Group of orthologs #229. Best score 1000 bits
Score difference with first non-orthologous sequence - C.intestinalis:1000 T.nigroviridis:1000

F6Q9K0              	100.00%		H3CRE9              	100.00%
Bootstrap support for F6Q9K0 as seed ortholog is 100%.
Bootstrap support for H3CRE9 as seed ortholog is 100%.

Group of orthologs #230. Best score 998 bits
Score difference with first non-orthologous sequence - C.intestinalis:998 T.nigroviridis:521

F7BGT4              	100.00%		H3CTL1              	100.00%
                    	       		H3C075              	6.00%
Bootstrap support for F7BGT4 as seed ortholog is 100%.
Bootstrap support for H3CTL1 as seed ortholog is 100%.

Group of orthologs #231. Best score 997 bits
Score difference with first non-orthologous sequence - C.intestinalis:997 T.nigroviridis:686

F7AUJ3              	100.00%		H3DE58              	100.00%
Bootstrap support for F7AUJ3 as seed ortholog is 100%.
Bootstrap support for H3DE58 as seed ortholog is 100%.

Group of orthologs #232. Best score 996 bits
Score difference with first non-orthologous sequence - C.intestinalis:996 T.nigroviridis:404

F6SI05              	100.00%		H3DEV3              	100.00%
                    	       		H3D2Z9              	14.52%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for H3DEV3 as seed ortholog is 100%.

Group of orthologs #233. Best score 994 bits
Score difference with first non-orthologous sequence - C.intestinalis:994 T.nigroviridis:994

F6U3T3              	100.00%		H3C6P2              	100.00%
                    	       		H3DIR0              	20.63%
                    	       		H3D8G3              	6.88%
Bootstrap support for F6U3T3 as seed ortholog is 100%.
Bootstrap support for H3C6P2 as seed ortholog is 100%.

Group of orthologs #234. Best score 993 bits
Score difference with first non-orthologous sequence - C.intestinalis:993 T.nigroviridis:242

F7AWF9              	100.00%		H3DGG6              	100.00%
                    	       		H3CHX4              	27.72%
Bootstrap support for F7AWF9 as seed ortholog is 100%.
Bootstrap support for H3DGG6 as seed ortholog is 99%.

Group of orthologs #235. Best score 985 bits
Score difference with first non-orthologous sequence - C.intestinalis:818 T.nigroviridis:638

F6YBA5              	100.00%		H3C3Z7              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 100%.
Bootstrap support for H3C3Z7 as seed ortholog is 100%.

Group of orthologs #236. Best score 985 bits
Score difference with first non-orthologous sequence - C.intestinalis:985 T.nigroviridis:985

F7B997              	100.00%		H3DDP7              	100.00%
Bootstrap support for F7B997 as seed ortholog is 100%.
Bootstrap support for H3DDP7 as seed ortholog is 100%.

Group of orthologs #237. Best score 981 bits
Score difference with first non-orthologous sequence - C.intestinalis:981 T.nigroviridis:981

F6Z4U5              	100.00%		H3DJY0              	100.00%
Bootstrap support for F6Z4U5 as seed ortholog is 100%.
Bootstrap support for H3DJY0 as seed ortholog is 100%.

Group of orthologs #238. Best score 980 bits
Score difference with first non-orthologous sequence - C.intestinalis:980 T.nigroviridis:980

F6PYU7              	100.00%		H3CRB8              	100.00%
                    	       		H3DCC2              	20.34%
                    	       		H3DGB7              	14.29%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for H3CRB8 as seed ortholog is 100%.

Group of orthologs #239. Best score 980 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 T.nigroviridis:710

F6UK45              	100.00%		H3D375              	100.00%
                    	       		H3CAJ8              	13.28%
                    	       		H3CTN4              	11.21%
Bootstrap support for F6UK45 as seed ortholog is 100%.
Bootstrap support for H3D375 as seed ortholog is 100%.

Group of orthologs #240. Best score 978 bits
Score difference with first non-orthologous sequence - C.intestinalis:978 T.nigroviridis:978

F7BAZ7              	100.00%		H3DPV5              	100.00%
                    	       		H3CXB0              	34.50%
                    	       		H3DHY8              	18.07%
Bootstrap support for F7BAZ7 as seed ortholog is 100%.
Bootstrap support for H3DPV5 as seed ortholog is 100%.

Group of orthologs #241. Best score 978 bits
Score difference with first non-orthologous sequence - C.intestinalis:978 T.nigroviridis:978

F6XQ09              	100.00%		H3CAL5              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for H3CAL5 as seed ortholog is 100%.

Group of orthologs #242. Best score 976 bits
Score difference with first non-orthologous sequence - C.intestinalis:976 T.nigroviridis:976

F6VCH9              	100.00%		H3D0B3              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for H3D0B3 as seed ortholog is 100%.

Group of orthologs #243. Best score 974 bits
Score difference with first non-orthologous sequence - C.intestinalis:974 T.nigroviridis:337

F6PKA1              	100.00%		H3DEC3              	100.00%
                    	       		H3CMH0              	32.02%
Bootstrap support for F6PKA1 as seed ortholog is 100%.
Bootstrap support for H3DEC3 as seed ortholog is 100%.

Group of orthologs #244. Best score 974 bits
Score difference with first non-orthologous sequence - C.intestinalis:974 T.nigroviridis:974

F6XY03              	100.00%		H3DF20              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 100%.
Bootstrap support for H3DF20 as seed ortholog is 100%.

Group of orthologs #245. Best score 973 bits
Score difference with first non-orthologous sequence - C.intestinalis:973 T.nigroviridis:973

F7B5A5              	100.00%		H3CNL2              	100.00%
Bootstrap support for F7B5A5 as seed ortholog is 100%.
Bootstrap support for H3CNL2 as seed ortholog is 100%.

Group of orthologs #246. Best score 972 bits
Score difference with first non-orthologous sequence - C.intestinalis:755 T.nigroviridis:818

F6TV75              	100.00%		H3CY22              	100.00%
                    	       		H3C2W0              	38.91%
                    	       		H3CJS5              	31.74%
Bootstrap support for F6TV75 as seed ortholog is 100%.
Bootstrap support for H3CY22 as seed ortholog is 100%.

Group of orthologs #247. Best score 972 bits
Score difference with first non-orthologous sequence - C.intestinalis:972 T.nigroviridis:742

F6WKV2              	100.00%		H3DGQ5              	100.00%
                    	       		H3CEV5              	36.32%
                    	       		H3CWE7              	32.97%
Bootstrap support for F6WKV2 as seed ortholog is 100%.
Bootstrap support for H3DGQ5 as seed ortholog is 100%.

Group of orthologs #248. Best score 972 bits
Score difference with first non-orthologous sequence - C.intestinalis:972 T.nigroviridis:972

F6XJU3              	100.00%		H3D1U8              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for H3D1U8 as seed ortholog is 100%.

Group of orthologs #249. Best score 972 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 T.nigroviridis:849

F6W8K8              	100.00%		H3DFV9              	100.00%
Bootstrap support for F6W8K8 as seed ortholog is 100%.
Bootstrap support for H3DFV9 as seed ortholog is 100%.

Group of orthologs #250. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 T.nigroviridis:232

F7AX97              	100.00%		H3DPT8              	100.00%
                    	       		H3C6X3              	20.99%
Bootstrap support for F7AX97 as seed ortholog is 100%.
Bootstrap support for H3DPT8 as seed ortholog is 99%.

Group of orthologs #251. Best score 967 bits
Score difference with first non-orthologous sequence - C.intestinalis:889 T.nigroviridis:967

F6XZ43              	100.00%		H3CGA4              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for H3CGA4 as seed ortholog is 100%.

Group of orthologs #252. Best score 963 bits
Score difference with first non-orthologous sequence - C.intestinalis:963 T.nigroviridis:506

F6PPP8              	100.00%		H3C5U3              	100.00%
                    	       		H3CPZ6              	9.25%
Bootstrap support for F6PPP8 as seed ortholog is 100%.
Bootstrap support for H3C5U3 as seed ortholog is 100%.

Group of orthologs #253. Best score 960 bits
Score difference with first non-orthologous sequence - C.intestinalis:960 T.nigroviridis:960

F6TDD6              	100.00%		H3DIP3              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for H3DIP3 as seed ortholog is 100%.

Group of orthologs #254. Best score 958 bits
Score difference with first non-orthologous sequence - C.intestinalis:958 T.nigroviridis:731

F6RMI2              	100.00%		H3D3P1              	100.00%
                    	       		H3DQS3              	5.29%
Bootstrap support for F6RMI2 as seed ortholog is 100%.
Bootstrap support for H3D3P1 as seed ortholog is 100%.

Group of orthologs #255. Best score 958 bits
Score difference with first non-orthologous sequence - C.intestinalis:958 T.nigroviridis:654

H2Y0K6              	100.00%		H3D992              	100.00%
Bootstrap support for H2Y0K6 as seed ortholog is 100%.
Bootstrap support for H3D992 as seed ortholog is 100%.

Group of orthologs #256. Best score 956 bits
Score difference with first non-orthologous sequence - C.intestinalis:956 T.nigroviridis:634

F6THL0              	100.00%		H3CSW2              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for H3CSW2 as seed ortholog is 100%.

Group of orthologs #257. Best score 954 bits
Score difference with first non-orthologous sequence - C.intestinalis:692 T.nigroviridis:205

F7AJ84              	100.00%		H3C6G2              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for H3C6G2 as seed ortholog is 99%.

Group of orthologs #258. Best score 953 bits
Score difference with first non-orthologous sequence - C.intestinalis:953 T.nigroviridis:953

F6YNJ1              	100.00%		H3D3U9              	100.00%
                    	       		H3D069              	41.53%
Bootstrap support for F6YNJ1 as seed ortholog is 100%.
Bootstrap support for H3D3U9 as seed ortholog is 100%.

Group of orthologs #259. Best score 953 bits
Score difference with first non-orthologous sequence - C.intestinalis:953 T.nigroviridis:953

F6ZRN0              	100.00%		H3CVN4              	100.00%
Bootstrap support for F6ZRN0 as seed ortholog is 100%.
Bootstrap support for H3CVN4 as seed ortholog is 100%.

Group of orthologs #260. Best score 953 bits
Score difference with first non-orthologous sequence - C.intestinalis:953 T.nigroviridis:953

F6YTY3              	100.00%		H3DNN8              	100.00%
Bootstrap support for F6YTY3 as seed ortholog is 100%.
Bootstrap support for H3DNN8 as seed ortholog is 100%.

Group of orthologs #261. Best score 951 bits
Score difference with first non-orthologous sequence - C.intestinalis:951 T.nigroviridis:951

F6SH99              	100.00%		H3DC94              	100.00%
                    	       		H3D891              	13.48%
Bootstrap support for F6SH99 as seed ortholog is 100%.
Bootstrap support for H3DC94 as seed ortholog is 100%.

Group of orthologs #262. Best score 948 bits
Score difference with first non-orthologous sequence - C.intestinalis:673 T.nigroviridis:842

H2XSA8              	100.00%		H3DM60              	100.00%
                    	       		H3D4Q1              	19.76%
                    	       		H3C7N2              	18.24%
Bootstrap support for H2XSA8 as seed ortholog is 100%.
Bootstrap support for H3DM60 as seed ortholog is 100%.

Group of orthologs #263. Best score 947 bits
Score difference with first non-orthologous sequence - C.intestinalis:947 T.nigroviridis:625

F6X3R5              	100.00%		H3DN93              	100.00%
Bootstrap support for F6X3R5 as seed ortholog is 100%.
Bootstrap support for H3DN93 as seed ortholog is 100%.

Group of orthologs #264. Best score 946 bits
Score difference with first non-orthologous sequence - C.intestinalis:946 T.nigroviridis:946

F6Y1Q3              	100.00%		H3DPB7              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for H3DPB7 as seed ortholog is 100%.

Group of orthologs #265. Best score 945 bits
Score difference with first non-orthologous sequence - C.intestinalis:848 T.nigroviridis:291

F6X2D1              	100.00%		H3DDP8              	100.00%
                    	       		H3CQX4              	36.49%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for H3DDP8 as seed ortholog is 99%.

Group of orthologs #266. Best score 945 bits
Score difference with first non-orthologous sequence - C.intestinalis:945 T.nigroviridis:720

F6WNB2              	100.00%		H3DB32              	100.00%
Bootstrap support for F6WNB2 as seed ortholog is 100%.
Bootstrap support for H3DB32 as seed ortholog is 100%.

Group of orthologs #267. Best score 941 bits
Score difference with first non-orthologous sequence - C.intestinalis:941 T.nigroviridis:102

F6W446              	100.00%		H3BZ61              	100.00%
Bootstrap support for F6W446 as seed ortholog is 100%.
Bootstrap support for H3BZ61 as seed ortholog is 96%.

Group of orthologs #268. Best score 938 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:448

F6XJD6              	100.00%		H3CT76              	100.00%
                    	       		H3CD48              	59.73%
                    	       		H3D7V3              	9.29%
Bootstrap support for F6XJD6 as seed ortholog is 100%.
Bootstrap support for H3CT76 as seed ortholog is 100%.

Group of orthologs #269. Best score 937 bits
Score difference with first non-orthologous sequence - C.intestinalis:937 T.nigroviridis:937

F7A2X8              	100.00%		H3CSA4              	100.00%
Bootstrap support for F7A2X8 as seed ortholog is 100%.
Bootstrap support for H3CSA4 as seed ortholog is 100%.

Group of orthologs #270. Best score 933 bits
Score difference with first non-orthologous sequence - C.intestinalis:933 T.nigroviridis:933

F6W453              	100.00%		H3CWV8              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for H3CWV8 as seed ortholog is 100%.

Group of orthologs #271. Best score 931 bits
Score difference with first non-orthologous sequence - C.intestinalis:931 T.nigroviridis:931

F6TF50              	100.00%		H3DAM4              	100.00%
Bootstrap support for F6TF50 as seed ortholog is 100%.
Bootstrap support for H3DAM4 as seed ortholog is 100%.

Group of orthologs #272. Best score 930 bits
Score difference with first non-orthologous sequence - C.intestinalis:612 T.nigroviridis:546

F6QVH1              	100.00%		H3D255              	100.00%
Bootstrap support for F6QVH1 as seed ortholog is 100%.
Bootstrap support for H3D255 as seed ortholog is 100%.

Group of orthologs #273. Best score 930 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 T.nigroviridis:930

F6VK85              	100.00%		H3CZY0              	100.00%
Bootstrap support for F6VK85 as seed ortholog is 100%.
Bootstrap support for H3CZY0 as seed ortholog is 100%.

Group of orthologs #274. Best score 926 bits
Score difference with first non-orthologous sequence - C.intestinalis:926 T.nigroviridis:863

F6W785              	100.00%		H3C2X6              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for H3C2X6 as seed ortholog is 100%.

Group of orthologs #275. Best score 925 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 T.nigroviridis:62

F7AKV1              	100.00%		H3DLM0              	100.00%
Bootstrap support for F7AKV1 as seed ortholog is 100%.
Bootstrap support for H3DLM0 as seed ortholog is 86%.

Group of orthologs #276. Best score 924 bits
Score difference with first non-orthologous sequence - C.intestinalis:924 T.nigroviridis:924

F6YYE4              	100.00%		H3BZA5              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for H3BZA5 as seed ortholog is 100%.

Group of orthologs #277. Best score 923 bits
Score difference with first non-orthologous sequence - C.intestinalis:923 T.nigroviridis:923

F6QSK8              	100.00%		H3D8H2              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for H3D8H2 as seed ortholog is 100%.

Group of orthologs #278. Best score 923 bits
Score difference with first non-orthologous sequence - C.intestinalis:923 T.nigroviridis:923

H2XWK5              	100.00%		H3DKG8              	100.00%
Bootstrap support for H2XWK5 as seed ortholog is 100%.
Bootstrap support for H3DKG8 as seed ortholog is 100%.

Group of orthologs #279. Best score 922 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 T.nigroviridis:922

F6T2M3              	100.00%		H3CXH0              	100.00%
                    	       		H3D9U5              	21.66%
Bootstrap support for F6T2M3 as seed ortholog is 67%.
Alternative seed ortholog is F6TNY6 (27 bits away from this cluster)
Bootstrap support for H3CXH0 as seed ortholog is 100%.

Group of orthologs #280. Best score 921 bits
Score difference with first non-orthologous sequence - C.intestinalis:921 T.nigroviridis:452

F6Q6T5              	100.00%		H3CPT4              	100.00%
Bootstrap support for F6Q6T5 as seed ortholog is 100%.
Bootstrap support for H3CPT4 as seed ortholog is 100%.

Group of orthologs #281. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 T.nigroviridis:305

F6Q5Y8              	100.00%		H3D2W6              	100.00%
                    	       		H3DE78              	8.89%
Bootstrap support for F6Q5Y8 as seed ortholog is 100%.
Bootstrap support for H3D2W6 as seed ortholog is 99%.

Group of orthologs #282. Best score 917 bits
Score difference with first non-orthologous sequence - C.intestinalis:917 T.nigroviridis:917

F6TC91              	100.00%		Q4S6U8              	100.00%
                    	       		H3D423              	95.38%
                    	       		H3CPT6              	20.84%
Bootstrap support for F6TC91 as seed ortholog is 100%.
Bootstrap support for Q4S6U8 as seed ortholog is 100%.

Group of orthologs #283. Best score 916 bits
Score difference with first non-orthologous sequence - C.intestinalis:916 T.nigroviridis:693

F6SSP0              	100.00%		H3BZL5              	100.00%
                    	       		H3CR83              	5.04%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for H3BZL5 as seed ortholog is 100%.

Group of orthologs #284. Best score 916 bits
Score difference with first non-orthologous sequence - C.intestinalis:916 T.nigroviridis:916

F6T8P3              	100.00%		H3D2X2              	100.00%
Bootstrap support for F6T8P3 as seed ortholog is 100%.
Bootstrap support for H3D2X2 as seed ortholog is 100%.

Group of orthologs #285. Best score 915 bits
Score difference with first non-orthologous sequence - C.intestinalis:915 T.nigroviridis:915

F6V4V0              	100.00%		H3DA53              	100.00%
Bootstrap support for F6V4V0 as seed ortholog is 100%.
Bootstrap support for H3DA53 as seed ortholog is 100%.

Group of orthologs #286. Best score 914 bits
Score difference with first non-orthologous sequence - C.intestinalis:914 T.nigroviridis:9

F7AEZ3              	100.00%		H3DK42              	100.00%
Bootstrap support for F7AEZ3 as seed ortholog is 100%.
Bootstrap support for H3DK42 as seed ortholog is 56%.
Alternative seed ortholog is H3D431 (9 bits away from this cluster)

Group of orthologs #287. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 T.nigroviridis:330

F6XQ16              	100.00%		H3CIR6              	100.00%
                    	       		H3DKV1              	15.42%
Bootstrap support for F6XQ16 as seed ortholog is 100%.
Bootstrap support for H3CIR6 as seed ortholog is 100%.

Group of orthologs #288. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 T.nigroviridis:439

H2Y3E7              	100.00%		H3CGJ1              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for H3CGJ1 as seed ortholog is 100%.

Group of orthologs #289. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 T.nigroviridis:913

F6YIR9              	100.00%		H3DKK3              	100.00%
Bootstrap support for F6YIR9 as seed ortholog is 100%.
Bootstrap support for H3DKK3 as seed ortholog is 100%.

Group of orthologs #290. Best score 911 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:144

F7B0S6              	100.00%		H3BVU1              	100.00%
Bootstrap support for F7B0S6 as seed ortholog is 100%.
Bootstrap support for H3BVU1 as seed ortholog is 99%.

Group of orthologs #291. Best score 911 bits
Score difference with first non-orthologous sequence - C.intestinalis:911 T.nigroviridis:911

F6ZBB5              	100.00%		H3CZ45              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for H3CZ45 as seed ortholog is 100%.

Group of orthologs #292. Best score 910 bits
Score difference with first non-orthologous sequence - C.intestinalis:910 T.nigroviridis:910

F6VC80              	100.00%		H3CYS8              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for H3CYS8 as seed ortholog is 100%.

Group of orthologs #293. Best score 908 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 T.nigroviridis:715

H2Y2W2              	100.00%		H3C0V9              	100.00%
Bootstrap support for H2Y2W2 as seed ortholog is 100%.
Bootstrap support for H3C0V9 as seed ortholog is 100%.

Group of orthologs #294. Best score 905 bits
Score difference with first non-orthologous sequence - C.intestinalis:905 T.nigroviridis:574

F7AJJ9              	100.00%		H3DBL9              	100.00%
                    	       		H3C132              	24.09%
                    	       		H3BZE4              	21.05%
Bootstrap support for F7AJJ9 as seed ortholog is 100%.
Bootstrap support for H3DBL9 as seed ortholog is 100%.

Group of orthologs #295. Best score 903 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 T.nigroviridis:2

F6SJ24              	100.00%		H3C0N3              	100.00%
F7B0Q2              	37.50%		
F6QB29              	29.17%		
Bootstrap support for F6SJ24 as seed ortholog is 80%.
Bootstrap support for H3C0N3 as seed ortholog is 87%.

Group of orthologs #296. Best score 902 bits
Score difference with first non-orthologous sequence - C.intestinalis:902 T.nigroviridis:136

F6XL93              	100.00%		H3DID6              	100.00%
                    	       		H3CTY4              	9.40%
Bootstrap support for F6XL93 as seed ortholog is 100%.
Bootstrap support for H3DID6 as seed ortholog is 98%.

Group of orthologs #297. Best score 902 bits
Score difference with first non-orthologous sequence - C.intestinalis:902 T.nigroviridis:902

F6UWK1              	100.00%		H3CYK2              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for H3CYK2 as seed ortholog is 100%.

Group of orthologs #298. Best score 901 bits
Score difference with first non-orthologous sequence - C.intestinalis:901 T.nigroviridis:729

F6RHH3              	100.00%		H3C4A9              	100.00%
                    	       		H3C4M3              	19.46%
Bootstrap support for F6RHH3 as seed ortholog is 100%.
Bootstrap support for H3C4A9 as seed ortholog is 100%.

Group of orthologs #299. Best score 901 bits
Score difference with first non-orthologous sequence - C.intestinalis:901 T.nigroviridis:901

F6VRU1              	100.00%		H3DPN9              	100.00%
Bootstrap support for F6VRU1 as seed ortholog is 100%.
Bootstrap support for H3DPN9 as seed ortholog is 100%.

Group of orthologs #300. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:899 T.nigroviridis:753

F6XUP6              	100.00%		H3DA59              	100.00%
                    	       		H3DEM2              	11.41%
Bootstrap support for F6XUP6 as seed ortholog is 100%.
Bootstrap support for H3DA59 as seed ortholog is 100%.

Group of orthologs #301. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:899 T.nigroviridis:899

F6QB99              	100.00%		H3C3N5              	100.00%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for H3C3N5 as seed ortholog is 100%.

Group of orthologs #302. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:899 T.nigroviridis:633

H2XYB3              	100.00%		H3DAL2              	100.00%
Bootstrap support for H2XYB3 as seed ortholog is 100%.
Bootstrap support for H3DAL2 as seed ortholog is 100%.

Group of orthologs #303. Best score 898 bits
Score difference with first non-orthologous sequence - C.intestinalis:898 T.nigroviridis:898

F6Z5V2              	100.00%		H3CH78              	100.00%
Bootstrap support for F6Z5V2 as seed ortholog is 100%.
Bootstrap support for H3CH78 as seed ortholog is 100%.

Group of orthologs #304. Best score 898 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 T.nigroviridis:631

F6XPL3              	100.00%		H3CU70              	100.00%
Bootstrap support for F6XPL3 as seed ortholog is 100%.
Bootstrap support for H3CU70 as seed ortholog is 100%.

Group of orthologs #305. Best score 897 bits
Score difference with first non-orthologous sequence - C.intestinalis:897 T.nigroviridis:659

F7AXL0              	100.00%		H3CZ36              	100.00%
                    	       		H3DC68              	6.78%
Bootstrap support for F7AXL0 as seed ortholog is 100%.
Bootstrap support for H3CZ36 as seed ortholog is 100%.

Group of orthologs #306. Best score 897 bits
Score difference with first non-orthologous sequence - C.intestinalis:897 T.nigroviridis:897

F6Z3U3              	100.00%		H3DBX3              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for H3DBX3 as seed ortholog is 100%.

Group of orthologs #307. Best score 896 bits
Score difference with first non-orthologous sequence - C.intestinalis:896 T.nigroviridis:896

F6ZW95              	100.00%		H3DP95              	100.00%
Bootstrap support for F6ZW95 as seed ortholog is 100%.
Bootstrap support for H3DP95 as seed ortholog is 100%.

Group of orthologs #308. Best score 895 bits
Score difference with first non-orthologous sequence - C.intestinalis:895 T.nigroviridis:895

F6UDW5              	100.00%		H3DCN0              	100.00%
                    	       		H3DFJ3              	44.75%
Bootstrap support for F6UDW5 as seed ortholog is 100%.
Bootstrap support for H3DCN0 as seed ortholog is 100%.

Group of orthologs #309. Best score 895 bits
Score difference with first non-orthologous sequence - C.intestinalis:895 T.nigroviridis:525

F6ST44              	100.00%		H3CHY5              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 100%.
Bootstrap support for H3CHY5 as seed ortholog is 100%.

Group of orthologs #310. Best score 894 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:217

F6QR95              	100.00%		H3CM09              	100.00%
F6ZVC5              	100.00%		H3DG72              	100.00%
                    	       		H3DL45              	32.22%
                    	       		H3CQV0              	26.91%
                    	       		H3CGW2              	26.90%
                    	       		H3CKJ9              	26.03%
                    	       		H3CP71              	25.33%
                    	       		H3DD15              	24.02%
                    	       		H3BXP4              	16.59%
                    	       		H3CXF1              	10.62%
                    	       		H3DK41              	9.87%
                    	       		H3CV56              	8.19%
Bootstrap support for F6QR95 as seed ortholog is 93%.
Bootstrap support for F6ZVC5 as seed ortholog is 89%.
Bootstrap support for H3CM09 as seed ortholog is 99%.
Bootstrap support for H3DG72 as seed ortholog is 99%.

Group of orthologs #311. Best score 894 bits
Score difference with first non-orthologous sequence - C.intestinalis:894 T.nigroviridis:894

F6SC38              	100.00%		H3CIK6              	100.00%
Bootstrap support for F6SC38 as seed ortholog is 100%.
Bootstrap support for H3CIK6 as seed ortholog is 100%.

Group of orthologs #312. Best score 892 bits
Score difference with first non-orthologous sequence - C.intestinalis:892 T.nigroviridis:892

F6TA53              	100.00%		H3CRV5              	100.00%
                    	       		H3CLH0              	54.04%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for H3CRV5 as seed ortholog is 100%.

Group of orthologs #313. Best score 890 bits
Score difference with first non-orthologous sequence - C.intestinalis:890 T.nigroviridis:158

F6YQS6              	100.00%		H3DAX4              	100.00%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for H3DAX4 as seed ortholog is 99%.

Group of orthologs #314. Best score 889 bits
Score difference with first non-orthologous sequence - C.intestinalis:889 T.nigroviridis:889

F7B690              	100.00%		H3C8G3              	100.00%
                    	       		H3CNJ1              	48.57%
Bootstrap support for F7B690 as seed ortholog is 100%.
Bootstrap support for H3C8G3 as seed ortholog is 100%.

Group of orthologs #315. Best score 889 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 T.nigroviridis:25

F6SYL0              	100.00%		Q4SNG9              	100.00%
L7N0T3              	100.00%		
Bootstrap support for F6SYL0 as seed ortholog is 100%.
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for Q4SNG9 as seed ortholog is 79%.

Group of orthologs #316. Best score 889 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 T.nigroviridis:408

Q1RL48              	100.00%		H3DBI5              	100.00%
Bootstrap support for Q1RL48 as seed ortholog is 100%.
Bootstrap support for H3DBI5 as seed ortholog is 100%.

Group of orthologs #317. Best score 888 bits
Score difference with first non-orthologous sequence - C.intestinalis:888 T.nigroviridis:888

F6QXK6              	100.00%		H3CQI9              	100.00%
Bootstrap support for F6QXK6 as seed ortholog is 100%.
Bootstrap support for H3CQI9 as seed ortholog is 100%.

Group of orthologs #318. Best score 885 bits
Score difference with first non-orthologous sequence - C.intestinalis:885 T.nigroviridis:735

F6UKC4              	100.00%		H3CQL2              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for H3CQL2 as seed ortholog is 100%.

Group of orthologs #319. Best score 881 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 T.nigroviridis:248

F6UGA6              	100.00%		H3CD60              	100.00%
Bootstrap support for F6UGA6 as seed ortholog is 100%.
Bootstrap support for H3CD60 as seed ortholog is 100%.

Group of orthologs #320. Best score 881 bits
Score difference with first non-orthologous sequence - C.intestinalis:881 T.nigroviridis:881

F6QZB5              	100.00%		H3D4E7              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for H3D4E7 as seed ortholog is 100%.

Group of orthologs #321. Best score 880 bits
Score difference with first non-orthologous sequence - C.intestinalis:880 T.nigroviridis:304

F6WUP4              	100.00%		H3CW78              	100.00%
Bootstrap support for F6WUP4 as seed ortholog is 100%.
Bootstrap support for H3CW78 as seed ortholog is 99%.

Group of orthologs #322. Best score 879 bits
Score difference with first non-orthologous sequence - C.intestinalis:879 T.nigroviridis:879

F6SXA9              	100.00%		H3D3N6              	100.00%
Bootstrap support for F6SXA9 as seed ortholog is 100%.
Bootstrap support for H3D3N6 as seed ortholog is 100%.

Group of orthologs #323. Best score 878 bits
Score difference with first non-orthologous sequence - C.intestinalis:878 T.nigroviridis:878

Q1RL50              	100.00%		H3BY73              	100.00%
                    	       		H3DID0              	9.08%
Bootstrap support for Q1RL50 as seed ortholog is 100%.
Bootstrap support for H3BY73 as seed ortholog is 100%.

Group of orthologs #324. Best score 878 bits
Score difference with first non-orthologous sequence - C.intestinalis:878 T.nigroviridis:878

F6SM85              	100.00%		H3CCG1              	100.00%
Bootstrap support for F6SM85 as seed ortholog is 100%.
Bootstrap support for H3CCG1 as seed ortholog is 100%.

Group of orthologs #325. Best score 876 bits
Score difference with first non-orthologous sequence - C.intestinalis:876 T.nigroviridis:876

F7AFG0              	100.00%		H3D1H4              	100.00%
Bootstrap support for F7AFG0 as seed ortholog is 100%.
Bootstrap support for H3D1H4 as seed ortholog is 100%.

Group of orthologs #326. Best score 872 bits
Score difference with first non-orthologous sequence - C.intestinalis:872 T.nigroviridis:683

F6ZZZ6              	100.00%		H3CCQ0              	100.00%
Bootstrap support for F6ZZZ6 as seed ortholog is 100%.
Bootstrap support for H3CCQ0 as seed ortholog is 100%.

Group of orthologs #327. Best score 871 bits
Score difference with first non-orthologous sequence - C.intestinalis:871 T.nigroviridis:871

F6QX34              	100.00%		Q4SMY2              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for Q4SMY2 as seed ortholog is 100%.

Group of orthologs #328. Best score 869 bits
Score difference with first non-orthologous sequence - C.intestinalis:869 T.nigroviridis:869

F6W6K9              	100.00%		H3BZD8              	100.00%
                    	       		H3CY19              	53.62%
                    	       		H3C8E8              	42.52%
Bootstrap support for F6W6K9 as seed ortholog is 100%.
Bootstrap support for H3BZD8 as seed ortholog is 100%.

Group of orthologs #329. Best score 869 bits
Score difference with first non-orthologous sequence - C.intestinalis:869 T.nigroviridis:869

F6YIU2              	100.00%		H3D7K1              	100.00%
                    	       		H3DQ02              	17.04%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for H3D7K1 as seed ortholog is 100%.

Group of orthologs #330. Best score 869 bits
Score difference with first non-orthologous sequence - C.intestinalis:869 T.nigroviridis:869

F6Z5U4              	100.00%		H3C385              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for H3C385 as seed ortholog is 100%.

Group of orthologs #331. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 T.nigroviridis:70

F6YZZ7              	100.00%		H3D1V4              	100.00%
Bootstrap support for F6YZZ7 as seed ortholog is 100%.
Bootstrap support for H3D1V4 as seed ortholog is 86%.

Group of orthologs #332. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:864 T.nigroviridis:44

F6ZZF2              	100.00%		H3DJD4              	100.00%
Bootstrap support for F6ZZF2 as seed ortholog is 100%.
Bootstrap support for H3DJD4 as seed ortholog is 83%.

Group of orthologs #333. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:863 T.nigroviridis:863

F6Q2H6              	100.00%		H3DN81              	100.00%
Bootstrap support for F6Q2H6 as seed ortholog is 100%.
Bootstrap support for H3DN81 as seed ortholog is 100%.

Group of orthologs #334. Best score 861 bits
Score difference with first non-orthologous sequence - C.intestinalis:861 T.nigroviridis:263

F6PMK8              	100.00%		H3C0Z3              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 100%.
Bootstrap support for H3C0Z3 as seed ortholog is 100%.

Group of orthologs #335. Best score 860 bits
Score difference with first non-orthologous sequence - C.intestinalis:860 T.nigroviridis:860

F7BBN1              	100.00%		H3DKZ3              	100.00%
                    	       		H3CT71              	25.94%
Bootstrap support for F7BBN1 as seed ortholog is 100%.
Bootstrap support for H3DKZ3 as seed ortholog is 100%.

Group of orthologs #336. Best score 860 bits
Score difference with first non-orthologous sequence - C.intestinalis:860 T.nigroviridis:860

F6U8C7              	100.00%		H3CGC3              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for H3CGC3 as seed ortholog is 100%.

Group of orthologs #337. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 T.nigroviridis:473

H2XWN8              	100.00%		H3D6J0              	100.00%
                    	       		H3CGM2              	26.37%
Bootstrap support for H2XWN8 as seed ortholog is 100%.
Bootstrap support for H3D6J0 as seed ortholog is 100%.

Group of orthologs #338. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 T.nigroviridis:641

F6UCG0              	100.00%		H3CD73              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for H3CD73 as seed ortholog is 100%.

Group of orthologs #339. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 T.nigroviridis:859

F6VRH3              	100.00%		H3CZ41              	100.00%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for H3CZ41 as seed ortholog is 100%.

Group of orthologs #340. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 T.nigroviridis:859

Q1RL58              	100.00%		H3BZA6              	100.00%
Bootstrap support for Q1RL58 as seed ortholog is 100%.
Bootstrap support for H3BZA6 as seed ortholog is 100%.

Group of orthologs #341. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 T.nigroviridis:859

F7B8G8              	100.00%		H3D8I7              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for H3D8I7 as seed ortholog is 100%.

Group of orthologs #342. Best score 857 bits
Score difference with first non-orthologous sequence - C.intestinalis:857 T.nigroviridis:857

F6WF19              	100.00%		H3CI83              	100.00%
Bootstrap support for F6WF19 as seed ortholog is 100%.
Bootstrap support for H3CI83 as seed ortholog is 100%.

Group of orthologs #343. Best score 857 bits
Score difference with first non-orthologous sequence - C.intestinalis:857 T.nigroviridis:763

F6WIG7              	100.00%		H3D6B9              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for H3D6B9 as seed ortholog is 100%.

Group of orthologs #344. Best score 856 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 T.nigroviridis:46

F6V6N1              	100.00%		H3D0E5              	100.00%
Bootstrap support for F6V6N1 as seed ortholog is 100%.
Bootstrap support for H3D0E5 as seed ortholog is 80%.

Group of orthologs #345. Best score 855 bits
Score difference with first non-orthologous sequence - C.intestinalis:855 T.nigroviridis:596

F7APA8              	100.00%		H3D3V9              	100.00%
Bootstrap support for F7APA8 as seed ortholog is 100%.
Bootstrap support for H3D3V9 as seed ortholog is 100%.

Group of orthologs #346. Best score 852 bits
Score difference with first non-orthologous sequence - C.intestinalis:852 T.nigroviridis:852

F6TBG7              	100.00%		H3D520              	100.00%
                    	       		H3C9P9              	30.27%
Bootstrap support for F6TBG7 as seed ortholog is 100%.
Bootstrap support for H3D520 as seed ortholog is 100%.

Group of orthologs #347. Best score 852 bits
Score difference with first non-orthologous sequence - C.intestinalis:852 T.nigroviridis:852

H2XQX5              	100.00%		H3CNM9              	100.00%
Bootstrap support for H2XQX5 as seed ortholog is 100%.
Bootstrap support for H3CNM9 as seed ortholog is 100%.

Group of orthologs #348. Best score 851 bits
Score difference with first non-orthologous sequence - C.intestinalis:851 T.nigroviridis:187

F6Z7N3              	100.00%		H3CHQ6              	100.00%
                    	       		H3C6E6              	44.85%
Bootstrap support for F6Z7N3 as seed ortholog is 100%.
Bootstrap support for H3CHQ6 as seed ortholog is 99%.

Group of orthologs #349. Best score 851 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 T.nigroviridis:353

F6YFE4              	100.00%		H3CZZ3              	100.00%
Bootstrap support for F6YFE4 as seed ortholog is 100%.
Bootstrap support for H3CZZ3 as seed ortholog is 100%.

Group of orthologs #350. Best score 851 bits
Score difference with first non-orthologous sequence - C.intestinalis:851 T.nigroviridis:851

H2XNX0              	100.00%		H3D2V8              	100.00%
Bootstrap support for H2XNX0 as seed ortholog is 100%.
Bootstrap support for H3D2V8 as seed ortholog is 100%.

Group of orthologs #351. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:850 T.nigroviridis:850

F7AD97              	100.00%		H3CBA5              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for H3CBA5 as seed ortholog is 100%.

Group of orthologs #352. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:850 T.nigroviridis:850

F7B2M5              	100.00%		H3CIN2              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for H3CIN2 as seed ortholog is 100%.

Group of orthologs #353. Best score 848 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 T.nigroviridis:423

F6R6G1              	100.00%		H3DGD7              	100.00%
Bootstrap support for F6R6G1 as seed ortholog is 100%.
Bootstrap support for H3DGD7 as seed ortholog is 100%.

Group of orthologs #354. Best score 848 bits
Score difference with first non-orthologous sequence - C.intestinalis:848 T.nigroviridis:848

F6X2V0              	100.00%		H3DRA7              	100.00%
Bootstrap support for F6X2V0 as seed ortholog is 100%.
Bootstrap support for H3DRA7 as seed ortholog is 100%.

Group of orthologs #355. Best score 847 bits
Score difference with first non-orthologous sequence - C.intestinalis:847 T.nigroviridis:847

F6RNR5              	100.00%		H3CB39              	100.00%
                    	       		H3CZ06              	36.83%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for H3CB39 as seed ortholog is 100%.

Group of orthologs #356. Best score 847 bits
Score difference with first non-orthologous sequence - C.intestinalis:847 T.nigroviridis:551

H2Y2C6              	100.00%		H3DEJ2              	100.00%
                    	       		H3CNV0              	25.04%
Bootstrap support for H2Y2C6 as seed ortholog is 100%.
Bootstrap support for H3DEJ2 as seed ortholog is 100%.

Group of orthologs #357. Best score 847 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 T.nigroviridis:847

F7AXK5              	100.00%		H3D394              	100.00%
Bootstrap support for F7AXK5 as seed ortholog is 100%.
Bootstrap support for H3D394 as seed ortholog is 100%.

Group of orthologs #358. Best score 845 bits
Score difference with first non-orthologous sequence - C.intestinalis:845 T.nigroviridis:845

F6YQL6              	100.00%		H3C9W2              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for H3C9W2 as seed ortholog is 100%.

Group of orthologs #359. Best score 844 bits
Score difference with first non-orthologous sequence - C.intestinalis:844 T.nigroviridis:844

F6RBT7              	100.00%		H3CFU4              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for H3CFU4 as seed ortholog is 100%.

Group of orthologs #360. Best score 842 bits
Score difference with first non-orthologous sequence - C.intestinalis:751 T.nigroviridis:842

F7A8C2              	100.00%		H3CJW0              	100.00%
                    	       		H3D7W5              	33.54%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for H3CJW0 as seed ortholog is 100%.

Group of orthologs #361. Best score 838 bits
Score difference with first non-orthologous sequence - C.intestinalis:838 T.nigroviridis:838

F6THC9              	100.00%		H3CMG9              	100.00%
Bootstrap support for F6THC9 as seed ortholog is 100%.
Bootstrap support for H3CMG9 as seed ortholog is 100%.

Group of orthologs #362. Best score 838 bits
Score difference with first non-orthologous sequence - C.intestinalis:838 T.nigroviridis:838

F6Q9P9              	100.00%		H3D5C4              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for H3D5C4 as seed ortholog is 100%.

Group of orthologs #363. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:586

F7A581              	100.00%		H3CS37              	100.00%
                    	       		H3DKV8              	6.71%
Bootstrap support for F7A581 as seed ortholog is 99%.
Bootstrap support for H3CS37 as seed ortholog is 100%.

Group of orthologs #364. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:512

F7AAM4              	100.00%		H3CFV4              	100.00%
Bootstrap support for F7AAM4 as seed ortholog is 99%.
Bootstrap support for H3CFV4 as seed ortholog is 100%.

Group of orthologs #365. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:837

H2Y0Q1              	100.00%		H3C3Z1              	100.00%
Bootstrap support for H2Y0Q1 as seed ortholog is 100%.
Bootstrap support for H3C3Z1 as seed ortholog is 100%.

Group of orthologs #366. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:837 T.nigroviridis:837

H2XVY7              	100.00%		H3D420              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for H3D420 as seed ortholog is 100%.

Group of orthologs #367. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 T.nigroviridis:124

F6V8A8              	100.00%		H3CD20              	100.00%
                    	       		H3CQP7              	22.32%
                    	       		H3DHL3              	14.22%
Bootstrap support for F6V8A8 as seed ortholog is 100%.
Bootstrap support for H3CD20 as seed ortholog is 97%.

Group of orthologs #368. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 T.nigroviridis:485

H2Y1I5              	100.00%		H3CBQ0              	100.00%
                    	       		H3CKI5              	9.12%
Bootstrap support for H2Y1I5 as seed ortholog is 100%.
Bootstrap support for H3CBQ0 as seed ortholog is 100%.

Group of orthologs #369. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 T.nigroviridis:836

F6XTJ3              	100.00%		Q4SNJ7              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for Q4SNJ7 as seed ortholog is 100%.

Group of orthologs #370. Best score 834 bits
Score difference with first non-orthologous sequence - C.intestinalis:834 T.nigroviridis:834

F6R8V3              	100.00%		H3CDU9              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for H3CDU9 as seed ortholog is 100%.

Group of orthologs #371. Best score 833 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 T.nigroviridis:565

F6U113              	100.00%		H3CU62              	100.00%
                    	       		H3DJ04              	22.05%
Bootstrap support for F6U113 as seed ortholog is 100%.
Bootstrap support for H3CU62 as seed ortholog is 100%.

Group of orthologs #372. Best score 833 bits
Score difference with first non-orthologous sequence - C.intestinalis:833 T.nigroviridis:833

F6TGK6              	100.00%		H3D3V6              	100.00%
Bootstrap support for F6TGK6 as seed ortholog is 100%.
Bootstrap support for H3D3V6 as seed ortholog is 100%.

Group of orthologs #373. Best score 832 bits
Score difference with first non-orthologous sequence - C.intestinalis:832 T.nigroviridis:832

H2XNB0              	100.00%		H3CK35              	100.00%
Bootstrap support for H2XNB0 as seed ortholog is 100%.
Bootstrap support for H3CK35 as seed ortholog is 100%.

Group of orthologs #374. Best score 831 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 T.nigroviridis:493

F6X189              	100.00%		H3CD14              	100.00%
Bootstrap support for F6X189 as seed ortholog is 100%.
Bootstrap support for H3CD14 as seed ortholog is 100%.

Group of orthologs #375. Best score 831 bits
Score difference with first non-orthologous sequence - C.intestinalis:831 T.nigroviridis:831

F7B9U5              	100.00%		H3DEV1              	100.00%
Bootstrap support for F7B9U5 as seed ortholog is 100%.
Bootstrap support for H3DEV1 as seed ortholog is 100%.

Group of orthologs #376. Best score 830 bits
Score difference with first non-orthologous sequence - C.intestinalis:830 T.nigroviridis:830

F6SI53              	100.00%		H3DP28              	100.00%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for H3DP28 as seed ortholog is 100%.

Group of orthologs #377. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 T.nigroviridis:276

H2XYN5              	100.00%		H3D771              	100.00%
                    	       		H3DG14              	9.71%
Bootstrap support for H2XYN5 as seed ortholog is 100%.
Bootstrap support for H3D771 as seed ortholog is 100%.

Group of orthologs #378. Best score 827 bits
Score difference with first non-orthologous sequence - C.intestinalis:827 T.nigroviridis:722

F6SGI6              	100.00%		H3D625              	100.00%
Bootstrap support for F6SGI6 as seed ortholog is 100%.
Bootstrap support for H3D625 as seed ortholog is 100%.

Group of orthologs #379. Best score 826 bits
Score difference with first non-orthologous sequence - C.intestinalis:826 T.nigroviridis:826

F6R854              	100.00%		H3DJH0              	100.00%
Bootstrap support for F6R854 as seed ortholog is 100%.
Bootstrap support for H3DJH0 as seed ortholog is 100%.

Group of orthologs #380. Best score 825 bits
Score difference with first non-orthologous sequence - C.intestinalis:825 T.nigroviridis:696

F6S1D4              	100.00%		H3D2R2              	100.00%
Bootstrap support for F6S1D4 as seed ortholog is 100%.
Bootstrap support for H3D2R2 as seed ortholog is 100%.

Group of orthologs #381. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 T.nigroviridis:824

H2XJU0              	100.00%		H3DPN8              	100.00%
                    	       		H3DFG7              	22.48%
Bootstrap support for H2XJU0 as seed ortholog is 100%.
Bootstrap support for H3DPN8 as seed ortholog is 100%.

Group of orthologs #382. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 T.nigroviridis:824

H2Y323              	100.00%		H3DCI3              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 100%.
Bootstrap support for H3DCI3 as seed ortholog is 100%.

Group of orthologs #383. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 T.nigroviridis:822

F6YRI1              	100.00%		H3CYR4              	100.00%
                    	       		H3CL08              	14.02%
Bootstrap support for F6YRI1 as seed ortholog is 100%.
Bootstrap support for H3CYR4 as seed ortholog is 100%.

Group of orthologs #384. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 T.nigroviridis:822

H2XVP1              	100.00%		H3D5F1              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for H3D5F1 as seed ortholog is 100%.

Group of orthologs #385. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:821 T.nigroviridis:821

F6T2R5              	100.00%		H3DDE2              	100.00%
Bootstrap support for F6T2R5 as seed ortholog is 100%.
Bootstrap support for H3DDE2 as seed ortholog is 100%.

Group of orthologs #386. Best score 820 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 T.nigroviridis:441

H2XTS9              	100.00%		H3D9X1              	100.00%
                    	       		H3C1J1              	8.87%
Bootstrap support for H2XTS9 as seed ortholog is 100%.
Bootstrap support for H3D9X1 as seed ortholog is 100%.

Group of orthologs #387. Best score 818 bits
Score difference with first non-orthologous sequence - C.intestinalis:818 T.nigroviridis:818

F6YHN3              	100.00%		H3D688              	100.00%
Bootstrap support for F6YHN3 as seed ortholog is 100%.
Bootstrap support for H3D688 as seed ortholog is 100%.

Group of orthologs #388. Best score 818 bits
Score difference with first non-orthologous sequence - C.intestinalis:818 T.nigroviridis:818

F6YXI8              	100.00%		H3DLC4              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for H3DLC4 as seed ortholog is 100%.

Group of orthologs #389. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:817 T.nigroviridis:817

F6VBU5              	100.00%		H3CA69              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for H3CA69 as seed ortholog is 100%.

Group of orthologs #390. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 T.nigroviridis:730

F7AED7              	100.00%		H3BYC3              	100.00%
Bootstrap support for F7AED7 as seed ortholog is 100%.
Bootstrap support for H3BYC3 as seed ortholog is 100%.

Group of orthologs #391. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 T.nigroviridis:814

F6WFB4              	100.00%		H3D9Q3              	100.00%
                    	       		H3CJW2              	43.14%
Bootstrap support for F6WFB4 as seed ortholog is 100%.
Bootstrap support for H3D9Q3 as seed ortholog is 100%.

Group of orthologs #392. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 T.nigroviridis:814

F6T2D0              	100.00%		H3C0A5              	100.00%
Bootstrap support for F6T2D0 as seed ortholog is 100%.
Bootstrap support for H3C0A5 as seed ortholog is 100%.

Group of orthologs #393. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 T.nigroviridis:814

F6T0L0              	100.00%		H3CM51              	100.00%
Bootstrap support for F6T0L0 as seed ortholog is 100%.
Bootstrap support for H3CM51 as seed ortholog is 100%.

Group of orthologs #394. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:217

F6V7V9              	100.00%		H3D777              	100.00%
                    	       		H3D068              	22.47%
                    	       		H3DIS8              	21.97%
Bootstrap support for F6V7V9 as seed ortholog is 100%.
Bootstrap support for H3D777 as seed ortholog is 100%.

Group of orthologs #395. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:813 T.nigroviridis:27

F6XLA1              	100.00%		H3DBB9              	100.00%
Bootstrap support for F6XLA1 as seed ortholog is 100%.
Bootstrap support for H3DBB9 as seed ortholog is 73%.
Alternative seed ortholog is H3DKP4 (27 bits away from this cluster)

Group of orthologs #396. Best score 812 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:333

F6WPG2              	100.00%		H3CT82              	100.00%
Bootstrap support for F6WPG2 as seed ortholog is 100%.
Bootstrap support for H3CT82 as seed ortholog is 100%.

Group of orthologs #397. Best score 811 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:811

F7AXJ1              	100.00%		H3DID4              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 100%.
Bootstrap support for H3DID4 as seed ortholog is 100%.

Group of orthologs #398. Best score 810 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 T.nigroviridis:218

F6U062              	100.00%		H3D2V4              	100.00%
Bootstrap support for F6U062 as seed ortholog is 100%.
Bootstrap support for H3D2V4 as seed ortholog is 99%.

Group of orthologs #399. Best score 810 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:810

L7N0S7              	100.00%		H3DH01              	100.00%
Bootstrap support for L7N0S7 as seed ortholog is 100%.
Bootstrap support for H3DH01 as seed ortholog is 100%.

Group of orthologs #400. Best score 809 bits
Score difference with first non-orthologous sequence - C.intestinalis:809 T.nigroviridis:809

F6Q2U2              	100.00%		H3CYV2              	100.00%
Bootstrap support for F6Q2U2 as seed ortholog is 100%.
Bootstrap support for H3CYV2 as seed ortholog is 100%.

Group of orthologs #401. Best score 809 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 T.nigroviridis:809

F7ADU2              	100.00%		H3C0Z4              	100.00%
Bootstrap support for F7ADU2 as seed ortholog is 100%.
Bootstrap support for H3C0Z4 as seed ortholog is 100%.

Group of orthologs #402. Best score 809 bits
Score difference with first non-orthologous sequence - C.intestinalis:809 T.nigroviridis:809

F6XJ08              	100.00%		H3CVD5              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for H3CVD5 as seed ortholog is 100%.

Group of orthologs #403. Best score 808 bits
Score difference with first non-orthologous sequence - C.intestinalis:808 T.nigroviridis:734

F6SBG8              	100.00%		H3CRG2              	100.00%
                    	       		H3BYS0              	11.46%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for H3CRG2 as seed ortholog is 100%.

Group of orthologs #404. Best score 808 bits
Score difference with first non-orthologous sequence - C.intestinalis:808 T.nigroviridis:808

F7BEI8              	100.00%		H3CHN8              	100.00%
Bootstrap support for F7BEI8 as seed ortholog is 100%.
Bootstrap support for H3CHN8 as seed ortholog is 100%.

Group of orthologs #405. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 T.nigroviridis:807

F6WTE3              	100.00%		H3D1U3              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for H3D1U3 as seed ortholog is 100%.

Group of orthologs #406. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 T.nigroviridis:634

F6TLJ7              	100.00%		H3DDB4              	100.00%
Bootstrap support for F6TLJ7 as seed ortholog is 100%.
Bootstrap support for H3DDB4 as seed ortholog is 100%.

Group of orthologs #407. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:805 T.nigroviridis:602

F6WD89              	100.00%		H3CVZ2              	100.00%
Q4H3F0              	6.34%		H3DEV0              	47.75%
                    	       		H3DR72              	27.09%
                    	       		H3C8S2              	26.57%
Bootstrap support for F6WD89 as seed ortholog is 100%.
Bootstrap support for H3CVZ2 as seed ortholog is 100%.

Group of orthologs #408. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:805 T.nigroviridis:419

H2XPG6              	100.00%		H3D6D9              	100.00%
                    	       		H3BVJ5              	17.12%
Bootstrap support for H2XPG6 as seed ortholog is 100%.
Bootstrap support for H3D6D9 as seed ortholog is 100%.

Group of orthologs #409. Best score 804 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 T.nigroviridis:658

F6PZ06              	100.00%		H3C4L6              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for H3C4L6 as seed ortholog is 100%.

Group of orthologs #410. Best score 803 bits
Score difference with first non-orthologous sequence - C.intestinalis:803 T.nigroviridis:803

F6T1J8              	100.00%		H3CEJ5              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 100%.
Bootstrap support for H3CEJ5 as seed ortholog is 100%.

Group of orthologs #411. Best score 803 bits
Score difference with first non-orthologous sequence - C.intestinalis:803 T.nigroviridis:803

F7ANB6              	100.00%		H3D143              	100.00%
Bootstrap support for F7ANB6 as seed ortholog is 100%.
Bootstrap support for H3D143 as seed ortholog is 100%.

Group of orthologs #412. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 T.nigroviridis:618

F7AT12              	100.00%		H3C6I4              	100.00%
                    	       		H3BX84              	8.09%
Bootstrap support for F7AT12 as seed ortholog is 100%.
Bootstrap support for H3C6I4 as seed ortholog is 100%.

Group of orthologs #413. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 T.nigroviridis:343

F6Q0W6              	100.00%		Q4RFC6              	100.00%
                    	       		H3DPB0              	32.07%
Bootstrap support for F6Q0W6 as seed ortholog is 100%.
Bootstrap support for Q4RFC6 as seed ortholog is 100%.

Group of orthologs #414. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 T.nigroviridis:802

H2XUH7              	100.00%		H3CUG5              	100.00%
                    	       		H3CXI3              	5.19%
Bootstrap support for H2XUH7 as seed ortholog is 100%.
Bootstrap support for H3CUG5 as seed ortholog is 100%.

Group of orthologs #415. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 T.nigroviridis:674

F6TGH1              	100.00%		H3D0V8              	100.00%
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for H3D0V8 as seed ortholog is 100%.

Group of orthologs #416. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 T.nigroviridis:537

H2XXZ3              	100.00%		H3DGI8              	100.00%
Bootstrap support for H2XXZ3 as seed ortholog is 100%.
Bootstrap support for H3DGI8 as seed ortholog is 100%.

Group of orthologs #417. Best score 801 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 T.nigroviridis:39

F6Z8I3              	100.00%		H3DJC1              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for H3DJC1 as seed ortholog is 90%.

Group of orthologs #418. Best score 800 bits
Score difference with first non-orthologous sequence - C.intestinalis:800 T.nigroviridis:297

F7ABV6              	100.00%		H3CX77              	100.00%
                    	       		H3C668              	10.04%
Bootstrap support for F7ABV6 as seed ortholog is 100%.
Bootstrap support for H3CX77 as seed ortholog is 99%.

Group of orthologs #419. Best score 800 bits
Score difference with first non-orthologous sequence - C.intestinalis:800 T.nigroviridis:800

F7BEF3              	100.00%		H3CB14              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for H3CB14 as seed ortholog is 100%.

Group of orthologs #420. Best score 800 bits
Score difference with first non-orthologous sequence - C.intestinalis:800 T.nigroviridis:800

F6WWD5              	100.00%		H3DAZ2              	100.00%
Bootstrap support for F6WWD5 as seed ortholog is 100%.
Bootstrap support for H3DAZ2 as seed ortholog is 100%.

Group of orthologs #421. Best score 800 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 T.nigroviridis:730

F6YFY0              	100.00%		Q4T3B4              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for Q4T3B4 as seed ortholog is 100%.

Group of orthologs #422. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 T.nigroviridis:799

F6ZAD3              	100.00%		H3C0G6              	100.00%
Bootstrap support for F6ZAD3 as seed ortholog is 100%.
Bootstrap support for H3C0G6 as seed ortholog is 100%.

Group of orthologs #423. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 T.nigroviridis:799

F6S399              	100.00%		H3DKM7              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for H3DKM7 as seed ortholog is 100%.

Group of orthologs #424. Best score 798 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:238

H2XU53              	100.00%		H3CKF5              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for H3CKF5 as seed ortholog is 100%.

Group of orthologs #425. Best score 798 bits
Score difference with first non-orthologous sequence - C.intestinalis:798 T.nigroviridis:798

H2Y100              	100.00%		H3CLI1              	100.00%
Bootstrap support for H2Y100 as seed ortholog is 100%.
Bootstrap support for H3CLI1 as seed ortholog is 100%.

Group of orthologs #426. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 T.nigroviridis:797

F7APZ8              	100.00%		H3D241              	100.00%
                    	       		H3CP60              	40.41%
Bootstrap support for F7APZ8 as seed ortholog is 100%.
Bootstrap support for H3D241 as seed ortholog is 100%.

Group of orthologs #427. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 T.nigroviridis:797

F6ZM86              	100.00%		H3CNR7              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for H3CNR7 as seed ortholog is 100%.

Group of orthologs #428. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 T.nigroviridis:797

F6XK22              	100.00%		H3DL13              	100.00%
Bootstrap support for F6XK22 as seed ortholog is 100%.
Bootstrap support for H3DL13 as seed ortholog is 100%.

Group of orthologs #429. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 T.nigroviridis:563

F6UR44              	100.00%		H3DA55              	100.00%
                    	       		H3D0W4              	9.28%
Bootstrap support for F6UR44 as seed ortholog is 100%.
Bootstrap support for H3DA55 as seed ortholog is 100%.

Group of orthologs #430. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 T.nigroviridis:796

F6RK00              	100.00%		H3CC89              	100.00%
Bootstrap support for F6RK00 as seed ortholog is 100%.
Bootstrap support for H3CC89 as seed ortholog is 100%.

Group of orthologs #431. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 T.nigroviridis:796

F7AFD2              	100.00%		H3CGH3              	100.00%
Bootstrap support for F7AFD2 as seed ortholog is 100%.
Bootstrap support for H3CGH3 as seed ortholog is 100%.

Group of orthologs #432. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 T.nigroviridis:796

F6YWF1              	100.00%		H3DHC2              	100.00%
Bootstrap support for F6YWF1 as seed ortholog is 100%.
Bootstrap support for H3DHC2 as seed ortholog is 100%.

Group of orthologs #433. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:795 T.nigroviridis:418

F7A0G1              	100.00%		H3D277              	100.00%
                    	       		H3DK53              	47.22%
                    	       		H3D2C1              	46.11%
                    	       		H3C055              	18.02%
Bootstrap support for F7A0G1 as seed ortholog is 100%.
Bootstrap support for H3D277 as seed ortholog is 100%.

Group of orthologs #434. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 T.nigroviridis:327

F6TKV3              	100.00%		H3DF05              	100.00%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for H3DF05 as seed ortholog is 100%.

Group of orthologs #435. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 T.nigroviridis:794

F6VQX3              	100.00%		H3DJ25              	100.00%
Bootstrap support for F6VQX3 as seed ortholog is 100%.
Bootstrap support for H3DJ25 as seed ortholog is 100%.

Group of orthologs #436. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 T.nigroviridis:794

F6U9S8              	100.00%		H3DNZ8              	100.00%
Bootstrap support for F6U9S8 as seed ortholog is 100%.
Bootstrap support for H3DNZ8 as seed ortholog is 100%.

Group of orthologs #437. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:793 T.nigroviridis:793

H2XSZ6              	100.00%		H3DGE8              	100.00%
                    	       		H3DAB1              	32.01%
Bootstrap support for H2XSZ6 as seed ortholog is 100%.
Bootstrap support for H3DGE8 as seed ortholog is 100%.

Group of orthologs #438. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:793 T.nigroviridis:793

F6W1Y5              	100.00%		H3DH09              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for H3DH09 as seed ortholog is 100%.

Group of orthologs #439. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 T.nigroviridis:374

F6QXC2              	100.00%		H3D8W7              	100.00%
                    	       		H3CZN9              	60.51%
                    	       		H3CQV5              	47.10%
Bootstrap support for F6QXC2 as seed ortholog is 100%.
Bootstrap support for H3D8W7 as seed ortholog is 100%.

Group of orthologs #440. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:792 T.nigroviridis:792

F6WKD5              	100.00%		H3DF65              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 100%.
Bootstrap support for H3DF65 as seed ortholog is 100%.

Group of orthologs #441. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:791 T.nigroviridis:791

F6ZQ20              	100.00%		H3DJP9              	100.00%
                    	       		H3DJR2              	28.67%
Bootstrap support for F6ZQ20 as seed ortholog is 100%.
Bootstrap support for H3DJP9 as seed ortholog is 100%.

Group of orthologs #442. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:791 T.nigroviridis:791

F6YEG0              	100.00%		H3CE25              	100.00%
Bootstrap support for F6YEG0 as seed ortholog is 100%.
Bootstrap support for H3CE25 as seed ortholog is 100%.

Group of orthologs #443. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:791 T.nigroviridis:791

F6WPI9              	100.00%		H3D223              	100.00%
Bootstrap support for F6WPI9 as seed ortholog is 100%.
Bootstrap support for H3D223 as seed ortholog is 100%.

Group of orthologs #444. Best score 790 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 T.nigroviridis:397

H2XLZ9              	100.00%		H3CAQ7              	100.00%
                    	       		H3D737              	11.62%
Bootstrap support for H2XLZ9 as seed ortholog is 100%.
Bootstrap support for H3CAQ7 as seed ortholog is 100%.

Group of orthologs #445. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 T.nigroviridis:789

F6R9H9              	100.00%		H3DNS1              	100.00%
Bootstrap support for F6R9H9 as seed ortholog is 100%.
Bootstrap support for H3DNS1 as seed ortholog is 100%.

Group of orthologs #446. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:138

H2XSX9              	100.00%		H3CA99              	100.00%
                    	       		H3CWS6              	45.00%
                    	       		H3CAA0              	42.14%
                    	       		H3CA98              	5.00%
Bootstrap support for H2XSX9 as seed ortholog is 87%.
Bootstrap support for H3CA99 as seed ortholog is 100%.

Group of orthologs #447. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:788 T.nigroviridis:185

F7B6Z2              	100.00%		H3D9Z7              	100.00%
                    	       		H3DCH7              	18.60%
Bootstrap support for F7B6Z2 as seed ortholog is 100%.
Bootstrap support for H3D9Z7 as seed ortholog is 99%.

Group of orthologs #448. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:787 T.nigroviridis:578

F6Z3S0              	100.00%		H3CQA0              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for H3CQA0 as seed ortholog is 100%.

Group of orthologs #449. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:787 T.nigroviridis:525

F6VL21              	100.00%		H3D7U0              	100.00%
Bootstrap support for F6VL21 as seed ortholog is 100%.
Bootstrap support for H3D7U0 as seed ortholog is 100%.

Group of orthologs #450. Best score 786 bits
Score difference with first non-orthologous sequence - C.intestinalis:786 T.nigroviridis:786

F6UDU8              	100.00%		H3DE04              	100.00%
Bootstrap support for F6UDU8 as seed ortholog is 100%.
Bootstrap support for H3DE04 as seed ortholog is 100%.

Group of orthologs #451. Best score 785 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 T.nigroviridis:785

F7A3E4              	100.00%		H3D933              	100.00%
Bootstrap support for F7A3E4 as seed ortholog is 100%.
Bootstrap support for H3D933 as seed ortholog is 100%.

Group of orthologs #452. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:783 T.nigroviridis:783

F6RIY5              	100.00%		H3C148              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for H3C148 as seed ortholog is 100%.

Group of orthologs #453. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:782 T.nigroviridis:782

F6SNC6              	100.00%		H3DMF5              	100.00%
                    	       		H3DCE5              	27.29%
Bootstrap support for F6SNC6 as seed ortholog is 100%.
Bootstrap support for H3DMF5 as seed ortholog is 100%.

Group of orthologs #454. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:782

H2XSG7              	100.00%		H3CDY5              	100.00%
Bootstrap support for H2XSG7 as seed ortholog is 100%.
Bootstrap support for H3CDY5 as seed ortholog is 100%.

Group of orthologs #455. Best score 781 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 T.nigroviridis:564

F6RHK8              	100.00%		H3DJ35              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for H3DJ35 as seed ortholog is 100%.

Group of orthologs #456. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 T.nigroviridis:779

F6UFC1              	100.00%		H3DR39              	100.00%
Bootstrap support for F6UFC1 as seed ortholog is 100%.
Bootstrap support for H3DR39 as seed ortholog is 100%.

Group of orthologs #457. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 T.nigroviridis:243

H2Y2A4              	100.00%		H3CPJ1              	100.00%
Bootstrap support for H2Y2A4 as seed ortholog is 100%.
Bootstrap support for H3CPJ1 as seed ortholog is 100%.

Group of orthologs #458. Best score 778 bits
Score difference with first non-orthologous sequence - C.intestinalis:778 T.nigroviridis:778

F7BIS1              	100.00%		H3CB85              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for H3CB85 as seed ortholog is 100%.

Group of orthologs #459. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 T.nigroviridis:777

F6YEB1              	100.00%		H3BVP8              	100.00%
Bootstrap support for F6YEB1 as seed ortholog is 100%.
Bootstrap support for H3BVP8 as seed ortholog is 100%.

Group of orthologs #460. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 T.nigroviridis:777

F6PQ94              	100.00%		H3DMY8              	100.00%
Bootstrap support for F6PQ94 as seed ortholog is 100%.
Bootstrap support for H3DMY8 as seed ortholog is 100%.

Group of orthologs #461. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 T.nigroviridis:564

H2XQ03              	100.00%		H3CT55              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 100%.
Bootstrap support for H3CT55 as seed ortholog is 100%.

Group of orthologs #462. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 T.nigroviridis:716

Q86SD3              	100.00%		H3CCP6              	100.00%
Bootstrap support for Q86SD3 as seed ortholog is 100%.
Bootstrap support for H3CCP6 as seed ortholog is 100%.

Group of orthologs #463. Best score 776 bits
Score difference with first non-orthologous sequence - C.intestinalis:776 T.nigroviridis:375

F7A9M5              	100.00%		H3DAX6              	100.00%
Bootstrap support for F7A9M5 as seed ortholog is 100%.
Bootstrap support for H3DAX6 as seed ortholog is 100%.

Group of orthologs #464. Best score 776 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 T.nigroviridis:598

H2XS20              	100.00%		H3DKE7              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for H3DKE7 as seed ortholog is 100%.

Group of orthologs #465. Best score 774 bits
Score difference with first non-orthologous sequence - C.intestinalis:774 T.nigroviridis:628

F6QJ41              	100.00%		H3CMD3              	100.00%
                    	       		H3D6Q5              	13.36%
Bootstrap support for F6QJ41 as seed ortholog is 100%.
Bootstrap support for H3CMD3 as seed ortholog is 100%.

Group of orthologs #466. Best score 773 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:426

F6PPA8              	100.00%		H3D2Q4              	100.00%
                    	       		H3D7U1              	11.66%
Bootstrap support for F6PPA8 as seed ortholog is 100%.
Bootstrap support for H3D2Q4 as seed ortholog is 100%.

Group of orthologs #467. Best score 773 bits
Score difference with first non-orthologous sequence - C.intestinalis:773 T.nigroviridis:773

F6Z3I0              	100.00%		H3CRB7              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for H3CRB7 as seed ortholog is 100%.

Group of orthologs #468. Best score 773 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:488

H2XQX6              	100.00%		H3D2A4              	100.00%
Bootstrap support for H2XQX6 as seed ortholog is 100%.
Bootstrap support for H3D2A4 as seed ortholog is 100%.

Group of orthologs #469. Best score 772 bits
Score difference with first non-orthologous sequence - C.intestinalis:772 T.nigroviridis:654

F6Z7W1              	100.00%		H3CKR6              	100.00%
                    	       		H3CYP1              	19.35%
Bootstrap support for F6Z7W1 as seed ortholog is 100%.
Bootstrap support for H3CKR6 as seed ortholog is 100%.

Group of orthologs #470. Best score 772 bits
Score difference with first non-orthologous sequence - C.intestinalis:645 T.nigroviridis:667

F6W0C3              	100.00%		H3DEV9              	100.00%
Bootstrap support for F6W0C3 as seed ortholog is 100%.
Bootstrap support for H3DEV9 as seed ortholog is 100%.

Group of orthologs #471. Best score 771 bits
Score difference with first non-orthologous sequence - C.intestinalis:771 T.nigroviridis:520

F6XKK7              	100.00%		H3D8B5              	100.00%
                    	       		H3D531              	30.62%
Bootstrap support for F6XKK7 as seed ortholog is 100%.
Bootstrap support for H3D8B5 as seed ortholog is 100%.

Group of orthologs #472. Best score 771 bits
Score difference with first non-orthologous sequence - C.intestinalis:771 T.nigroviridis:771

H2XMI6              	100.00%		H3D774              	100.00%
Bootstrap support for H2XMI6 as seed ortholog is 100%.
Bootstrap support for H3D774 as seed ortholog is 100%.

Group of orthologs #473. Best score 770 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:268

F6YV05              	100.00%		H3CL07              	100.00%
F6SW71              	27.28%		H3C6S4              	6.06%
Bootstrap support for F6YV05 as seed ortholog is 98%.
Bootstrap support for H3CL07 as seed ortholog is 99%.

Group of orthologs #474. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 T.nigroviridis:432

F6PXA9              	100.00%		H3CJF1              	100.00%
Bootstrap support for F6PXA9 as seed ortholog is 100%.
Bootstrap support for H3CJF1 as seed ortholog is 100%.

Group of orthologs #475. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 T.nigroviridis:190

F6YGI4              	100.00%		H3CQ44              	100.00%
Bootstrap support for F6YGI4 as seed ortholog is 100%.
Bootstrap support for H3CQ44 as seed ortholog is 99%.

Group of orthologs #476. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 T.nigroviridis:769

F7BBW9              	100.00%		H3CF53              	100.00%
Bootstrap support for F7BBW9 as seed ortholog is 100%.
Bootstrap support for H3CF53 as seed ortholog is 100%.

Group of orthologs #477. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 T.nigroviridis:767

F6WA81              	100.00%		H3CG41              	100.00%
                    	       		H3D2I7              	15.71%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for H3CG41 as seed ortholog is 100%.

Group of orthologs #478. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 T.nigroviridis:767

F6VCN7              	100.00%		H3D2C5              	100.00%
                    	       		H3CUX3              	37.89%
Bootstrap support for F6VCN7 as seed ortholog is 100%.
Bootstrap support for H3D2C5 as seed ortholog is 100%.

Group of orthologs #479. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 T.nigroviridis:767

F6RKU1              	100.00%		H3BXS9              	100.00%
Bootstrap support for F6RKU1 as seed ortholog is 100%.
Bootstrap support for H3BXS9 as seed ortholog is 100%.

Group of orthologs #480. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:767

F6XH38              	100.00%		H3DGL7              	100.00%
Bootstrap support for F6XH38 as seed ortholog is 99%.
Bootstrap support for H3DGL7 as seed ortholog is 100%.

Group of orthologs #481. Best score 766 bits
Score difference with first non-orthologous sequence - C.intestinalis:766 T.nigroviridis:720

F6W7I3              	100.00%		H3CG97              	100.00%
F6W7K5              	66.44%		
Bootstrap support for F6W7I3 as seed ortholog is 100%.
Bootstrap support for H3CG97 as seed ortholog is 100%.

Group of orthologs #482. Best score 766 bits
Score difference with first non-orthologous sequence - C.intestinalis:766 T.nigroviridis:766

F6RK88              	100.00%		H3BVU7              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for H3BVU7 as seed ortholog is 100%.

Group of orthologs #483. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:765 T.nigroviridis:765

F6R2U8              	100.00%		H3C0E7              	100.00%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for H3C0E7 as seed ortholog is 100%.

Group of orthologs #484. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:122

F6XRF6              	100.00%		H3CXG4              	100.00%
Bootstrap support for F6XRF6 as seed ortholog is 100%.
Bootstrap support for H3CXG4 as seed ortholog is 99%.

Group of orthologs #485. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 T.nigroviridis:764

F6XMA0              	100.00%		Q4T8U5              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for Q4T8U5 as seed ortholog is 100%.

Group of orthologs #486. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:613

F6YTL6              	100.00%		Q4SGW6              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for Q4SGW6 as seed ortholog is 100%.

Group of orthologs #487. Best score 763 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 T.nigroviridis:763

F6TPR3              	100.00%		H3D6W2              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for H3D6W2 as seed ortholog is 100%.

Group of orthologs #488. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 T.nigroviridis:762

F6QQX7              	100.00%		H3DNJ0              	100.00%
                    	       		H3CWX2              	45.80%
                    	       		H3CYY2              	37.67%
Bootstrap support for F6QQX7 as seed ortholog is 100%.
Bootstrap support for H3DNJ0 as seed ortholog is 100%.

Group of orthologs #489. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 T.nigroviridis:762

H2XRD5              	100.00%		H3CA58              	100.00%
                    	       		H3D2L5              	20.21%
Bootstrap support for H2XRD5 as seed ortholog is 100%.
Bootstrap support for H3CA58 as seed ortholog is 100%.

Group of orthologs #490. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 T.nigroviridis:628

F6WV80              	100.00%		H3D9S9              	100.00%
                    	       		H3D722              	6.97%
Bootstrap support for F6WV80 as seed ortholog is 100%.
Bootstrap support for H3D9S9 as seed ortholog is 100%.

Group of orthologs #491. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 T.nigroviridis:762

F6TSV6              	100.00%		H3CR53              	100.00%
Bootstrap support for F6TSV6 as seed ortholog is 100%.
Bootstrap support for H3CR53 as seed ortholog is 100%.

Group of orthologs #492. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 T.nigroviridis:762

F6UET6              	100.00%		H3D7B9              	100.00%
Bootstrap support for F6UET6 as seed ortholog is 100%.
Bootstrap support for H3D7B9 as seed ortholog is 100%.

Group of orthologs #493. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:761 T.nigroviridis:761

F6U2U3              	100.00%		H3CCF3              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for H3CCF3 as seed ortholog is 100%.

Group of orthologs #494. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:263

F6TDB0              	100.00%		H3CQ11              	100.00%
Bootstrap support for F6TDB0 as seed ortholog is 95%.
Bootstrap support for H3CQ11 as seed ortholog is 99%.

Group of orthologs #495. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:761 T.nigroviridis:761

F6WNR2              	100.00%		H3CQ09              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for H3CQ09 as seed ortholog is 100%.

Group of orthologs #496. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:761 T.nigroviridis:761

F6R901              	100.00%		H3D8Y0              	100.00%
Bootstrap support for F6R901 as seed ortholog is 100%.
Bootstrap support for H3D8Y0 as seed ortholog is 100%.

Group of orthologs #497. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:760 T.nigroviridis:760

F7APX0              	100.00%		H3DP21              	100.00%
Bootstrap support for F7APX0 as seed ortholog is 100%.
Bootstrap support for H3DP21 as seed ortholog is 100%.

Group of orthologs #498. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 T.nigroviridis:759

F6TM52              	100.00%		H3CAG6              	100.00%
Bootstrap support for F6TM52 as seed ortholog is 100%.
Bootstrap support for H3CAG6 as seed ortholog is 100%.

Group of orthologs #499. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:758 T.nigroviridis:549

F6SBC7              	100.00%		H3CVP3              	100.00%
                    	       		H3C4P6              	56.30%
Bootstrap support for F6SBC7 as seed ortholog is 100%.
Bootstrap support for H3CVP3 as seed ortholog is 100%.

Group of orthologs #500. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 T.nigroviridis:758

F6S7U7              	100.00%		H3D758              	100.00%
                    	       		H3CID6              	53.12%
Bootstrap support for F6S7U7 as seed ortholog is 100%.
Bootstrap support for H3D758 as seed ortholog is 100%.

Group of orthologs #501. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:758 T.nigroviridis:758

F6UP49              	100.00%		H3D9K5              	100.00%
                    	       		H3DEG9              	14.64%
Bootstrap support for F6UP49 as seed ortholog is 100%.
Bootstrap support for H3D9K5 as seed ortholog is 100%.

Group of orthologs #502. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:758 T.nigroviridis:758

F7B5P4              	100.00%		H3D472              	100.00%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for H3D472 as seed ortholog is 100%.

Group of orthologs #503. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 T.nigroviridis:757

Q8HIM9              	100.00%		H3C6G5              	100.00%
                    	       		Q4JQI5              	100.00%
Bootstrap support for Q8HIM9 as seed ortholog is 100%.
Bootstrap support for H3C6G5 as seed ortholog is 100%.
Bootstrap support for Q4JQI5 as seed ortholog is 100%.

Group of orthologs #504. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:129

F6VSC2              	100.00%		H3CKV9              	100.00%
Bootstrap support for F6VSC2 as seed ortholog is 99%.
Bootstrap support for H3CKV9 as seed ortholog is 99%.

Group of orthologs #505. Best score 755 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:159

H2Y3G9              	100.00%		H3D841              	100.00%
                    	       		H3DMA7              	13.62%
Bootstrap support for H2Y3G9 as seed ortholog is 99%.
Bootstrap support for H3D841 as seed ortholog is 99%.

Group of orthologs #506. Best score 755 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 T.nigroviridis:387

Q4H2R0              	100.00%		H3D2C0              	100.00%
Bootstrap support for Q4H2R0 as seed ortholog is 100%.
Bootstrap support for H3D2C0 as seed ortholog is 100%.

Group of orthologs #507. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 T.nigroviridis:754

F6X873              	100.00%		H3C263              	100.00%
                    	       		H3D4W2              	40.58%
                    	       		H3CDG8              	37.48%
Bootstrap support for F6X873 as seed ortholog is 100%.
Bootstrap support for H3C263 as seed ortholog is 100%.

Group of orthologs #508. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 T.nigroviridis:220

H2XXU0              	100.00%		H3D4B8              	100.00%
                    	       		H3D7C6              	37.65%
                    	       		H3CN09              	14.14%
Bootstrap support for H2XXU0 as seed ortholog is 100%.
Bootstrap support for H3D4B8 as seed ortholog is 100%.

Group of orthologs #509. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 T.nigroviridis:754

F6UXH9              	100.00%		H3CTT8              	100.00%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for H3CTT8 as seed ortholog is 100%.

Group of orthologs #510. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 T.nigroviridis:578

F6UIE4              	100.00%		H3D0I8              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 100%.
Bootstrap support for H3D0I8 as seed ortholog is 100%.

Group of orthologs #511. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:706 T.nigroviridis:460

F6Y4K6              	100.00%		H3DMI0              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for H3DMI0 as seed ortholog is 100%.

Group of orthologs #512. Best score 753 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:753

F6RHA1              	100.00%		Q4SLD9              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for Q4SLD9 as seed ortholog is 100%.

Group of orthologs #513. Best score 753 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:511

Q1RPW7              	100.00%		H3CUB1              	100.00%
Bootstrap support for Q1RPW7 as seed ortholog is 100%.
Bootstrap support for H3CUB1 as seed ortholog is 100%.

Group of orthologs #514. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 T.nigroviridis:752

F6PST3              	100.00%		H3CCP7              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for H3CCP7 as seed ortholog is 100%.

Group of orthologs #515. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 T.nigroviridis:752

H2XZM0              	100.00%		H3D7M8              	100.00%
Bootstrap support for H2XZM0 as seed ortholog is 100%.
Bootstrap support for H3D7M8 as seed ortholog is 100%.

Group of orthologs #516. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:751 T.nigroviridis:751

F6R3V0              	100.00%		H3DIX5              	100.00%
                    	       		H3C6W3              	28.96%
Bootstrap support for F6R3V0 as seed ortholog is 100%.
Bootstrap support for H3DIX5 as seed ortholog is 100%.

Group of orthologs #517. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:98

F6XQ30              	100.00%		H3DKK7              	100.00%
Bootstrap support for F6XQ30 as seed ortholog is 99%.
Bootstrap support for H3DKK7 as seed ortholog is 98%.

Group of orthologs #518. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 T.nigroviridis:748

F6VG31              	100.00%		H3BZK0              	100.00%
Bootstrap support for F6VG31 as seed ortholog is 100%.
Bootstrap support for H3BZK0 as seed ortholog is 100%.

Group of orthologs #519. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 T.nigroviridis:748

F6ZDB4              	100.00%		H3CNP3              	100.00%
Bootstrap support for F6ZDB4 as seed ortholog is 100%.
Bootstrap support for H3CNP3 as seed ortholog is 100%.

Group of orthologs #520. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 T.nigroviridis:748

F6WAT8              	100.00%		H3D0A4              	100.00%
Bootstrap support for F6WAT8 as seed ortholog is 100%.
Bootstrap support for H3D0A4 as seed ortholog is 100%.

Group of orthologs #521. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 T.nigroviridis:630

F6R107              	100.00%		H3DIP9              	100.00%
Bootstrap support for F6R107 as seed ortholog is 100%.
Bootstrap support for H3DIP9 as seed ortholog is 100%.

Group of orthologs #522. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 T.nigroviridis:405

F6Y8H4              	100.00%		H3CGF7              	100.00%
                    	       		H3CR92              	33.22%
Bootstrap support for F6Y8H4 as seed ortholog is 100%.
Bootstrap support for H3CGF7 as seed ortholog is 100%.

Group of orthologs #523. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 T.nigroviridis:685

F6WWW4              	100.00%		H3C736              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for H3C736 as seed ortholog is 100%.

Group of orthologs #524. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 T.nigroviridis:747

H2XR85              	100.00%		H3CDJ3              	100.00%
Bootstrap support for H2XR85 as seed ortholog is 100%.
Bootstrap support for H3CDJ3 as seed ortholog is 100%.

Group of orthologs #525. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 T.nigroviridis:374

F6Z2U1              	100.00%		H3CZM4              	100.00%
Bootstrap support for F6Z2U1 as seed ortholog is 100%.
Bootstrap support for H3CZM4 as seed ortholog is 100%.

Group of orthologs #526. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 T.nigroviridis:747

F7AYB9              	100.00%		H3D084              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for H3D084 as seed ortholog is 100%.

Group of orthologs #527. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 T.nigroviridis:747

H2Y1U3              	100.00%		H3DJ97              	100.00%
Bootstrap support for H2Y1U3 as seed ortholog is 100%.
Bootstrap support for H3DJ97 as seed ortholog is 100%.

Group of orthologs #528. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:9

F6SWW8              	100.00%		H3CUQ3              	100.00%
F6YSD1              	18.67%		
Bootstrap support for F6SWW8 as seed ortholog is 99%.
Bootstrap support for H3CUQ3 as seed ortholog is 55%.
Alternative seed ortholog is H3C6F1 (9 bits away from this cluster)

Group of orthologs #529. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 T.nigroviridis:745

F6YDI9              	100.00%		H3DHM8              	100.00%
                    	       		Q4T0U0              	43.29%
Bootstrap support for F6YDI9 as seed ortholog is 100%.
Bootstrap support for H3DHM8 as seed ortholog is 100%.

Group of orthologs #530. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 T.nigroviridis:663

F6SPK3              	100.00%		H3D513              	100.00%
Bootstrap support for F6SPK3 as seed ortholog is 100%.
Bootstrap support for H3D513 as seed ortholog is 100%.

Group of orthologs #531. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 T.nigroviridis:745

F6XCG6              	100.00%		H3D6U4              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for H3D6U4 as seed ortholog is 100%.

Group of orthologs #532. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:744 T.nigroviridis:744

F7BJC2              	100.00%		H3CCM2              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for H3CCM2 as seed ortholog is 100%.

Group of orthologs #533. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:60

A2SY09              	100.00%		H3CNG9              	100.00%
                    	       		H3CS65              	70.59%
                    	       		H3DNG2              	41.18%
Bootstrap support for A2SY09 as seed ortholog is 88%.
Bootstrap support for H3CNG9 as seed ortholog is 99%.

Group of orthologs #534. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:743 T.nigroviridis:743

F7B593              	100.00%		H3CGE6              	100.00%
Bootstrap support for F7B593 as seed ortholog is 100%.
Bootstrap support for H3CGE6 as seed ortholog is 100%.

Group of orthologs #535. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:743 T.nigroviridis:743

F6YH93              	100.00%		H3DLL5              	100.00%
Bootstrap support for F6YH93 as seed ortholog is 100%.
Bootstrap support for H3DLL5 as seed ortholog is 100%.

Group of orthologs #536. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:743 T.nigroviridis:743

H2XS37              	100.00%		H3DHB7              	100.00%
Bootstrap support for H2XS37 as seed ortholog is 100%.
Bootstrap support for H3DHB7 as seed ortholog is 100%.

Group of orthologs #537. Best score 741 bits
Score difference with first non-orthologous sequence - C.intestinalis:741 T.nigroviridis:630

F6YD09              	100.00%		H3BX01              	100.00%
Bootstrap support for F6YD09 as seed ortholog is 100%.
Bootstrap support for H3BX01 as seed ortholog is 100%.

Group of orthologs #538. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:35

F6T8C7              	100.00%		Q4S744              	100.00%
F6SDC9              	100.00%		H3DJZ1              	100.00%
L7N0T1              	96.30%		H3DJ96              	56.00%
Bootstrap support for F6T8C7 as seed ortholog is 98%.
Bootstrap support for F6SDC9 as seed ortholog is 96%.
Bootstrap support for Q4S744 as seed ortholog is 96%.
Bootstrap support for H3DJZ1 as seed ortholog is 94%.

Group of orthologs #539. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:740 T.nigroviridis:464

F6R815              	100.00%		H3D1R6              	100.00%
                    	       		H3BYB9              	13.99%
Bootstrap support for F6R815 as seed ortholog is 100%.
Bootstrap support for H3D1R6 as seed ortholog is 100%.

Group of orthologs #540. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:740 T.nigroviridis:740

H2Y2G2              	100.00%		H3DGK0              	100.00%
                    	       		H3CY80              	28.08%
Bootstrap support for H2Y2G2 as seed ortholog is 100%.
Bootstrap support for H3DGK0 as seed ortholog is 100%.

Group of orthologs #541. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 T.nigroviridis:213

F6WXR3              	100.00%		H3CYN5              	100.00%
                    	       		H3DKQ9              	30.66%
                    	       		H3DCK2              	25.59%
Bootstrap support for F6WXR3 as seed ortholog is 100%.
Bootstrap support for H3CYN5 as seed ortholog is 100%.

Group of orthologs #542. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:738

F6ZWA3              	100.00%		H3CAY4              	100.00%
Bootstrap support for F6ZWA3 as seed ortholog is 100%.
Bootstrap support for H3CAY4 as seed ortholog is 100%.

Group of orthologs #543. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:738 T.nigroviridis:594

F6T4Y7              	100.00%		H3D0G3              	100.00%
Bootstrap support for F6T4Y7 as seed ortholog is 100%.
Bootstrap support for H3D0G3 as seed ortholog is 100%.

Group of orthologs #544. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:738 T.nigroviridis:738

H2Y1C4              	100.00%		H3CRR9              	100.00%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for H3CRR9 as seed ortholog is 100%.

Group of orthologs #545. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:108

F6YCG7              	100.00%		H3CRE1              	100.00%
                    	       		H3DG36              	16.98%
                    	       		H3CM90              	12.02%
Bootstrap support for F6YCG7 as seed ortholog is 100%.
Bootstrap support for H3CRE1 as seed ortholog is 94%.

Group of orthologs #546. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 T.nigroviridis:578

F6PLQ2              	100.00%		H3DHE7              	100.00%
                    	       		H3CXF0              	29.92%
Bootstrap support for F6PLQ2 as seed ortholog is 100%.
Bootstrap support for H3DHE7 as seed ortholog is 100%.

Group of orthologs #547. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:400

F6YR02              	100.00%		H3C4J4              	100.00%
Bootstrap support for F6YR02 as seed ortholog is 100%.
Bootstrap support for H3C4J4 as seed ortholog is 100%.

Group of orthologs #548. Best score 736 bits
Score difference with first non-orthologous sequence - C.intestinalis:736 T.nigroviridis:578

H2XUE4              	100.00%		Q4TDL9              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for Q4TDL9 as seed ortholog is 100%.

Group of orthologs #549. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 T.nigroviridis:735

F7APM6              	100.00%		H3BXN5              	100.00%
                    	       		H3CCS2              	19.65%
                    	       		H3CTX6              	15.18%
Bootstrap support for F7APM6 as seed ortholog is 100%.
Bootstrap support for H3BXN5 as seed ortholog is 100%.

Group of orthologs #550. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 T.nigroviridis:735

F6Y1N2              	100.00%		H3CPR4              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for H3CPR4 as seed ortholog is 100%.

Group of orthologs #551. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 T.nigroviridis:586

F6W2C6              	100.00%		H3DEU5              	100.00%
Bootstrap support for F6W2C6 as seed ortholog is 100%.
Bootstrap support for H3DEU5 as seed ortholog is 100%.

Group of orthologs #552. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:734 T.nigroviridis:734

F6W790              	100.00%		H3DPG2              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for H3DPG2 as seed ortholog is 100%.

Group of orthologs #553. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 T.nigroviridis:496

F6PL57              	100.00%		H3CU71              	100.00%
                    	       		H3D2M8              	19.26%
Bootstrap support for F6PL57 as seed ortholog is 100%.
Bootstrap support for H3CU71 as seed ortholog is 100%.

Group of orthologs #554. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 T.nigroviridis:732

F6VDC4              	100.00%		Q4T4D0              	100.00%
                    	       		H3DDM7              	25.52%
Bootstrap support for F6VDC4 as seed ortholog is 100%.
Bootstrap support for Q4T4D0 as seed ortholog is 100%.

Group of orthologs #555. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 T.nigroviridis:732

F6X4B8              	100.00%		H3BWV5              	100.00%
Bootstrap support for F6X4B8 as seed ortholog is 100%.
Bootstrap support for H3BWV5 as seed ortholog is 100%.

Group of orthologs #556. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 T.nigroviridis:548

F6U1K7              	100.00%		H3CSM1              	100.00%
Bootstrap support for F6U1K7 as seed ortholog is 100%.
Bootstrap support for H3CSM1 as seed ortholog is 100%.

Group of orthologs #557. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 T.nigroviridis:732

F6WAZ5              	100.00%		H3D7J5              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for H3D7J5 as seed ortholog is 100%.

Group of orthologs #558. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 T.nigroviridis:730

F7BJA7              	100.00%		H3D8M6              	100.00%
                    	       		H3CQJ2              	29.77%
Bootstrap support for F7BJA7 as seed ortholog is 100%.
Bootstrap support for H3D8M6 as seed ortholog is 100%.

Group of orthologs #559. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 T.nigroviridis:730

F6VYC6              	100.00%		H3CV18              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for H3CV18 as seed ortholog is 100%.

Group of orthologs #560. Best score 729 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:610

F6UTP0              	100.00%		H3C5F2              	100.00%
Bootstrap support for F6UTP0 as seed ortholog is 100%.
Bootstrap support for H3C5F2 as seed ortholog is 100%.

Group of orthologs #561. Best score 729 bits
Score difference with first non-orthologous sequence - C.intestinalis:729 T.nigroviridis:729

F6SWH7              	100.00%		H3DIC3              	100.00%
Bootstrap support for F6SWH7 as seed ortholog is 100%.
Bootstrap support for H3DIC3 as seed ortholog is 100%.

Group of orthologs #562. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 T.nigroviridis:461

F6XSL1              	100.00%		H3DAV3              	100.00%
                    	       		H3CMZ5              	22.50%
                    	       		H3BXI0              	7.99%
Bootstrap support for F6XSL1 as seed ortholog is 100%.
Bootstrap support for H3DAV3 as seed ortholog is 100%.

Group of orthologs #563. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 T.nigroviridis:727

F7BMY3              	100.00%		H3CNK2              	100.00%
                    	       		H3C2U2              	10.28%
Bootstrap support for F7BMY3 as seed ortholog is 100%.
Bootstrap support for H3CNK2 as seed ortholog is 100%.

Group of orthologs #564. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 T.nigroviridis:727

Q4H2R2              	100.00%		H3D6H4              	100.00%
F6VQ10              	71.86%		
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for H3D6H4 as seed ortholog is 100%.

Group of orthologs #565. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 T.nigroviridis:727

F6XIP9              	100.00%		H3BVT8              	100.00%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for H3BVT8 as seed ortholog is 100%.

Group of orthologs #566. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:212

F6X9G8              	100.00%		H3CNZ7              	100.00%
Bootstrap support for F6X9G8 as seed ortholog is 99%.
Bootstrap support for H3CNZ7 as seed ortholog is 99%.

Group of orthologs #567. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:310

O76808              	100.00%		H3D633              	100.00%
Bootstrap support for O76808 as seed ortholog is 100%.
Bootstrap support for H3D633 as seed ortholog is 100%.

Group of orthologs #568. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 T.nigroviridis:725

F6V5U6              	100.00%		H3CWR0              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for H3CWR0 as seed ortholog is 100%.

Group of orthologs #569. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:412

F7B875              	100.00%		H3DPP0              	100.00%
Bootstrap support for F7B875 as seed ortholog is 99%.
Bootstrap support for H3DPP0 as seed ortholog is 100%.

Group of orthologs #570. Best score 724 bits
Score difference with first non-orthologous sequence - C.intestinalis:724 T.nigroviridis:724

F6UQ90              	100.00%		H3C920              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 100%.
Bootstrap support for H3C920 as seed ortholog is 100%.

Group of orthologs #571. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:494 T.nigroviridis:723

F6REB0              	100.00%		H3CA44              	100.00%
                    	       		H3CNK5              	14.44%
Bootstrap support for F6REB0 as seed ortholog is 100%.
Bootstrap support for H3CA44 as seed ortholog is 100%.

Group of orthologs #572. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:723 T.nigroviridis:723

F6SNM2              	100.00%		H3CSU6              	100.00%
                    	       		H3BZS7              	14.87%
Bootstrap support for F6SNM2 as seed ortholog is 100%.
Bootstrap support for H3CSU6 as seed ortholog is 100%.

Group of orthologs #573. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 T.nigroviridis:478

F6SUC9              	100.00%		H3DG70              	100.00%
                    	       		H3D7M3              	17.86%
Bootstrap support for F6SUC9 as seed ortholog is 100%.
Bootstrap support for H3DG70 as seed ortholog is 100%.

Group of orthologs #574. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:723 T.nigroviridis:723

F6TRN8              	100.00%		H3CUG9              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for H3CUG9 as seed ortholog is 100%.

Group of orthologs #575. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 T.nigroviridis:391

F7AV37              	100.00%		H3CVJ4              	100.00%
                    	       		H3CC29              	30.86%
                    	       		H3BZC7              	22.30%
Bootstrap support for F7AV37 as seed ortholog is 100%.
Bootstrap support for H3CVJ4 as seed ortholog is 100%.

Group of orthologs #576. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 T.nigroviridis:589

F6VTM3              	100.00%		H3C3K5              	100.00%
Bootstrap support for F6VTM3 as seed ortholog is 100%.
Bootstrap support for H3C3K5 as seed ortholog is 100%.

Group of orthologs #577. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 T.nigroviridis:722

F6XK10              	100.00%		H3CW90              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for H3CW90 as seed ortholog is 100%.

Group of orthologs #578. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:721 T.nigroviridis:100

F6UW46              	100.00%		H3D733              	100.00%
                    	       		H3CI54              	47.06%
                    	       		H3DI58              	17.16%
                    	       		H3D6F6              	7.35%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for H3D733 as seed ortholog is 99%.

Group of orthologs #579. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 T.nigroviridis:551

F6TWF6              	100.00%		H3C4S0              	100.00%
Bootstrap support for F6TWF6 as seed ortholog is 100%.
Bootstrap support for H3C4S0 as seed ortholog is 100%.

Group of orthologs #580. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:721 T.nigroviridis:721

F6UF57              	100.00%		H3D6E2              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for H3D6E2 as seed ortholog is 100%.

Group of orthologs #581. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:721 T.nigroviridis:335

F6Y9D9              	100.00%		H3CVB6              	100.00%
Bootstrap support for F6Y9D9 as seed ortholog is 100%.
Bootstrap support for H3CVB6 as seed ortholog is 100%.

Group of orthologs #582. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:721 T.nigroviridis:721

F7B580              	100.00%		H3D9Y4              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for H3D9Y4 as seed ortholog is 100%.

Group of orthologs #583. Best score 719 bits
Score difference with first non-orthologous sequence - C.intestinalis:719 T.nigroviridis:719

F6ZC49              	100.00%		Q4SFT9              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for Q4SFT9 as seed ortholog is 100%.

Group of orthologs #584. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 T.nigroviridis:48

Q1RLE7              	100.00%		H3D2G7              	100.00%
                    	       		H3BWM8              	5.93%
Bootstrap support for Q1RLE7 as seed ortholog is 100%.
Bootstrap support for H3D2G7 as seed ortholog is 74%.
Alternative seed ortholog is H3DEX8 (48 bits away from this cluster)

Group of orthologs #585. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 T.nigroviridis:459

H2XW04              	100.00%		H3CVH3              	100.00%
Bootstrap support for H2XW04 as seed ortholog is 100%.
Bootstrap support for H3CVH3 as seed ortholog is 100%.

Group of orthologs #586. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 T.nigroviridis:717

H2XM66              	100.00%		H3C6H7              	100.00%
                    	       		H3C7W2              	18.17%
Bootstrap support for H2XM66 as seed ortholog is 100%.
Bootstrap support for H3C6H7 as seed ortholog is 100%.

Group of orthologs #587. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 T.nigroviridis:301

F6XF93              	100.00%		H3CB69              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for H3CB69 as seed ortholog is 100%.

Group of orthologs #588. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:716 T.nigroviridis:576

F6WR85              	100.00%		H3CFW6              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for H3CFW6 as seed ortholog is 100%.

Group of orthologs #589. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 T.nigroviridis:715

H2XLC7              	100.00%		H3CV90              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for H3CV90 as seed ortholog is 100%.

Group of orthologs #590. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:714 T.nigroviridis:714

F6SXW5              	100.00%		H3CNI0              	100.00%
Bootstrap support for F6SXW5 as seed ortholog is 100%.
Bootstrap support for H3CNI0 as seed ortholog is 100%.

Group of orthologs #591. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:714 T.nigroviridis:714

F6TPA2              	100.00%		H3CWQ4              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for H3CWQ4 as seed ortholog is 100%.

Group of orthologs #592. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:714 T.nigroviridis:714

F6Q0U4              	100.00%		Q4RS02              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for Q4RS02 as seed ortholog is 100%.

Group of orthologs #593. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 T.nigroviridis:510

F6QWS2              	100.00%		H3CRT7              	100.00%
Bootstrap support for F6QWS2 as seed ortholog is 100%.
Bootstrap support for H3CRT7 as seed ortholog is 100%.

Group of orthologs #594. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 T.nigroviridis:713

F6XVY9              	100.00%		Q4RYB4              	100.00%
Bootstrap support for F6XVY9 as seed ortholog is 100%.
Bootstrap support for Q4RYB4 as seed ortholog is 100%.

Group of orthologs #595. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:103

F6Y9W3              	100.00%		H3C3B2              	100.00%
Bootstrap support for F6Y9W3 as seed ortholog is 99%.
Bootstrap support for H3C3B2 as seed ortholog is 98%.

Group of orthologs #596. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 T.nigroviridis:712

F6X9E5              	100.00%		H3CB86              	100.00%
Bootstrap support for F6X9E5 as seed ortholog is 100%.
Bootstrap support for H3CB86 as seed ortholog is 100%.

Group of orthologs #597. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 T.nigroviridis:711

H2XWW7              	100.00%		H3D042              	100.00%
                    	       		H3DHB2              	52.45%
                    	       		H3CGX4              	26.36%
                    	       		H3DFT4              	8.70%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for H3D042 as seed ortholog is 100%.

Group of orthologs #598. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 T.nigroviridis:711

F6Q2Q3              	100.00%		H3DK15              	100.00%
                    	       		H3C1H6              	16.77%
Bootstrap support for F6Q2Q3 as seed ortholog is 100%.
Bootstrap support for H3DK15 as seed ortholog is 100%.

Group of orthologs #599. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 T.nigroviridis:78

F6UI47              	100.00%		H3C338              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for H3C338 as seed ortholog is 98%.

Group of orthologs #600. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 T.nigroviridis:711

F6V4K8              	100.00%		H3DN87              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for H3DN87 as seed ortholog is 100%.

Group of orthologs #601. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 T.nigroviridis:711

F6Y025              	100.00%		H3DF09              	100.00%
Bootstrap support for F6Y025 as seed ortholog is 100%.
Bootstrap support for H3DF09 as seed ortholog is 100%.

Group of orthologs #602. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 T.nigroviridis:520

F6WZA5              	100.00%		H3CHK8              	100.00%
                    	       		H3DPU3              	44.50%
Bootstrap support for F6WZA5 as seed ortholog is 100%.
Bootstrap support for H3CHK8 as seed ortholog is 100%.

Group of orthologs #603. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 T.nigroviridis:320

H2Y2J7              	100.00%		H3DM86              	100.00%
                    	       		H3CA18              	5.12%
Bootstrap support for H2Y2J7 as seed ortholog is 100%.
Bootstrap support for H3DM86 as seed ortholog is 99%.

Group of orthologs #604. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 T.nigroviridis:535

F6QEZ7              	100.00%		H3CWD9              	100.00%
Bootstrap support for F6QEZ7 as seed ortholog is 100%.
Bootstrap support for H3CWD9 as seed ortholog is 100%.

Group of orthologs #605. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 T.nigroviridis:710

F6WYI9              	100.00%		H3CVX1              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for H3CVX1 as seed ortholog is 100%.

Group of orthologs #606. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 T.nigroviridis:636

F6W8G0              	100.00%		H3D3X4              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for H3D3X4 as seed ortholog is 100%.

Group of orthologs #607. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 T.nigroviridis:102

F6U0I8              	100.00%		H3C542              	100.00%
Bootstrap support for F6U0I8 as seed ortholog is 100%.
Bootstrap support for H3C542 as seed ortholog is 99%.

Group of orthologs #608. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:709 T.nigroviridis:709

F6UQJ9              	100.00%		H3DE41              	100.00%
Bootstrap support for F6UQJ9 as seed ortholog is 100%.
Bootstrap support for H3DE41 as seed ortholog is 100%.

Group of orthologs #609. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 T.nigroviridis:426

Q4H2T4              	100.00%		H3CUH4              	100.00%
                    	       		H3CC01              	47.26%
Bootstrap support for Q4H2T4 as seed ortholog is 100%.
Bootstrap support for H3CUH4 as seed ortholog is 100%.

Group of orthologs #610. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 T.nigroviridis:29

F6Y8V9              	100.00%		H3CDL9              	100.00%
Bootstrap support for F6Y8V9 as seed ortholog is 100%.
Bootstrap support for H3CDL9 as seed ortholog is 62%.
Alternative seed ortholog is H3D2V7 (29 bits away from this cluster)

Group of orthologs #611. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 T.nigroviridis:708

F7AYX3              	100.00%		H3CSI1              	100.00%
Bootstrap support for F7AYX3 as seed ortholog is 100%.
Bootstrap support for H3CSI1 as seed ortholog is 100%.

Group of orthologs #612. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 T.nigroviridis:708

F6V9G2              	100.00%		H3DNU0              	100.00%
Bootstrap support for F6V9G2 as seed ortholog is 100%.
Bootstrap support for H3DNU0 as seed ortholog is 100%.

Group of orthologs #613. Best score 707 bits
Score difference with first non-orthologous sequence - C.intestinalis:707 T.nigroviridis:573

H2Y0P6              	100.00%		H3DB95              	100.00%
Bootstrap support for H2Y0P6 as seed ortholog is 100%.
Bootstrap support for H3DB95 as seed ortholog is 100%.

Group of orthologs #614. Best score 706 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 T.nigroviridis:430

F6WI66              	100.00%		H3CMA7              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 100%.
Bootstrap support for H3CMA7 as seed ortholog is 100%.

Group of orthologs #615. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 T.nigroviridis:459

F6Z726              	100.00%		H3CTJ0              	100.00%
Bootstrap support for F6Z726 as seed ortholog is 100%.
Bootstrap support for H3CTJ0 as seed ortholog is 100%.

Group of orthologs #616. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 T.nigroviridis:188

F7AA31              	100.00%		H3CXE2              	100.00%
Bootstrap support for F7AA31 as seed ortholog is 100%.
Bootstrap support for H3CXE2 as seed ortholog is 99%.

Group of orthologs #617. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:704 T.nigroviridis:585

F7ARH4              	100.00%		H3CW49              	100.00%
                    	       		H3CCH4              	10.69%
Bootstrap support for F7ARH4 as seed ortholog is 100%.
Bootstrap support for H3CW49 as seed ortholog is 100%.

Group of orthologs #618. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:704 T.nigroviridis:704

F6Y921              	100.00%		H3CL19              	100.00%
Bootstrap support for F6Y921 as seed ortholog is 100%.
Bootstrap support for H3CL19 as seed ortholog is 100%.

Group of orthologs #619. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:703 T.nigroviridis:703

H2XL64              	100.00%		H3BYH0              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for H3BYH0 as seed ortholog is 100%.

Group of orthologs #620. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 T.nigroviridis:702

F6PJX3              	100.00%		H3C5W5              	100.00%
Bootstrap support for F6PJX3 as seed ortholog is 100%.
Bootstrap support for H3C5W5 as seed ortholog is 100%.

Group of orthologs #621. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 T.nigroviridis:365

F7AK99              	100.00%		H3CAK7              	100.00%
Bootstrap support for F7AK99 as seed ortholog is 100%.
Bootstrap support for H3CAK7 as seed ortholog is 100%.

Group of orthologs #622. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 T.nigroviridis:702

F6VFC5              	100.00%		H3DCC8              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for H3DCC8 as seed ortholog is 100%.

Group of orthologs #623. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 T.nigroviridis:701

F6QF10              	100.00%		H3DPK6              	100.00%
                    	       		H3CA59              	14.60%
Bootstrap support for F6QF10 as seed ortholog is 100%.
Bootstrap support for H3DPK6 as seed ortholog is 100%.

Group of orthologs #624. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 T.nigroviridis:560

H2Y288              	100.00%		H3BX07              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for H3BX07 as seed ortholog is 100%.

Group of orthologs #625. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:538

F7BHP4              	100.00%		H3DNK8              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for H3DNK8 as seed ortholog is 100%.

Group of orthologs #626. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 T.nigroviridis:701

Q1RPU5              	100.00%		H3DJR7              	100.00%
Bootstrap support for Q1RPU5 as seed ortholog is 100%.
Bootstrap support for H3DJR7 as seed ortholog is 100%.

Group of orthologs #627. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:84

F7ACX7              	100.00%		H3CND7              	100.00%
                    	       		H3C9V3              	8.65%
Bootstrap support for F7ACX7 as seed ortholog is 98%.
Bootstrap support for H3CND7 as seed ortholog is 95%.

Group of orthologs #628. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:164

F7AQG9              	100.00%		H3DD92              	100.00%
                    	       		H3D7K7              	24.65%
Bootstrap support for F7AQG9 as seed ortholog is 100%.
Bootstrap support for H3DD92 as seed ortholog is 99%.

Group of orthologs #629. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 T.nigroviridis:412

F6TPD4              	100.00%		H3D2L0              	100.00%
                    	       		H3C9E5              	54.36%
                    	       		H3CQE7              	34.75%
Bootstrap support for F6TPD4 as seed ortholog is 100%.
Bootstrap support for H3D2L0 as seed ortholog is 100%.

Group of orthologs #630. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:27

H2XSE7              	100.00%		Q4SZC3              	100.00%
                    	       		H3CLV3              	80.52%
Bootstrap support for H2XSE7 as seed ortholog is 99%.
Bootstrap support for Q4SZC3 as seed ortholog is 77%.

Group of orthologs #631. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 T.nigroviridis:698

F7BQ30              	100.00%		H3CNJ8              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 100%.
Bootstrap support for H3CNJ8 as seed ortholog is 100%.

Group of orthologs #632. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 T.nigroviridis:491

F6TZU9              	100.00%		H3DPG5              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for H3DPG5 as seed ortholog is 100%.

Group of orthologs #633. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 T.nigroviridis:540

F6UWX3              	100.00%		H3CI49              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for H3CI49 as seed ortholog is 100%.

Group of orthologs #634. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:696 T.nigroviridis:696

F6VDB6              	100.00%		H3DKZ6              	100.00%
Bootstrap support for F6VDB6 as seed ortholog is 100%.
Bootstrap support for H3DKZ6 as seed ortholog is 100%.

Group of orthologs #635. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 T.nigroviridis:695

F7AEC5              	100.00%		H3DP39              	100.00%
                    	       		H3CLS0              	72.56%
                    	       		H3BXZ9              	25.12%
Bootstrap support for F7AEC5 as seed ortholog is 100%.
Bootstrap support for H3DP39 as seed ortholog is 100%.

Group of orthologs #636. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:695

F6PHI7              	100.00%		H3CMJ2              	100.00%
Bootstrap support for F6PHI7 as seed ortholog is 100%.
Bootstrap support for H3CMJ2 as seed ortholog is 100%.

Group of orthologs #637. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 T.nigroviridis:695

F7A429              	100.00%		H3D392              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for H3D392 as seed ortholog is 100%.

Group of orthologs #638. Best score 694 bits
Score difference with first non-orthologous sequence - C.intestinalis:694 T.nigroviridis:694

F7A8S2              	100.00%		H3CIM1              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for H3CIM1 as seed ortholog is 100%.

Group of orthologs #639. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 T.nigroviridis:169

F6TAP2              	100.00%		H3D2N0              	100.00%
                    	       		H3BYB7              	9.83%
Bootstrap support for F6TAP2 as seed ortholog is 100%.
Bootstrap support for H3D2N0 as seed ortholog is 99%.

Group of orthologs #640. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 T.nigroviridis:693

F6PL95              	100.00%		H3D5X8              	100.00%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for H3D5X8 as seed ortholog is 100%.

Group of orthologs #641. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 T.nigroviridis:619

F7ASK1              	100.00%		H3CIU6              	100.00%
Bootstrap support for F7ASK1 as seed ortholog is 100%.
Bootstrap support for H3CIU6 as seed ortholog is 100%.

Group of orthologs #642. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 T.nigroviridis:468

H2XQT6              	100.00%		H3CU75              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 100%.
Bootstrap support for H3CU75 as seed ortholog is 100%.

Group of orthologs #643. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 T.nigroviridis:398

F6X7X8              	100.00%		H3D5W6              	100.00%
                    	       		Q4SEX7              	24.95%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for H3D5W6 as seed ortholog is 100%.

Group of orthologs #644. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 T.nigroviridis:691

F6RAB3              	100.00%		Q4SFA0              	100.00%
                    	       		H3CXN6              	95.35%
Bootstrap support for F6RAB3 as seed ortholog is 100%.
Bootstrap support for Q4SFA0 as seed ortholog is 100%.

Group of orthologs #645. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 T.nigroviridis:691

F7BNC1              	100.00%		H3D7L0              	100.00%
Bootstrap support for F7BNC1 as seed ortholog is 100%.
Bootstrap support for H3D7L0 as seed ortholog is 100%.

Group of orthologs #646. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 T.nigroviridis:691

H2XU13              	100.00%		Q4S5X1              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for Q4S5X1 as seed ortholog is 100%.

Group of orthologs #647. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:153

F6XCC4              	100.00%		H3DGN5              	100.00%
Bootstrap support for F6XCC4 as seed ortholog is 84%.
Bootstrap support for H3DGN5 as seed ortholog is 99%.

Group of orthologs #648. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 T.nigroviridis:495

F7AX62              	100.00%		H3D4X5              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for H3D4X5 as seed ortholog is 100%.

Group of orthologs #649. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 T.nigroviridis:144

F6SF88              	100.00%		H3CZG2              	100.00%
Bootstrap support for F6SF88 as seed ortholog is 100%.
Bootstrap support for H3CZG2 as seed ortholog is 98%.

Group of orthologs #650. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 T.nigroviridis:485

F6UHT2              	100.00%		H3CXS0              	100.00%
Bootstrap support for F6UHT2 as seed ortholog is 100%.
Bootstrap support for H3CXS0 as seed ortholog is 100%.

Group of orthologs #651. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 T.nigroviridis:513

F6YL86              	100.00%		H3DM59              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for H3DM59 as seed ortholog is 100%.

Group of orthologs #652. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 T.nigroviridis:688

F6RCY1              	100.00%		H3CDZ7              	100.00%
                    	       		H3CTS1              	20.16%
Bootstrap support for F6RCY1 as seed ortholog is 100%.
Bootstrap support for H3CDZ7 as seed ortholog is 100%.

Group of orthologs #653. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 T.nigroviridis:333

F6PPJ1              	100.00%		H3DBR2              	100.00%
                    	       		H3C6F2              	23.38%
Bootstrap support for F6PPJ1 as seed ortholog is 100%.
Bootstrap support for H3DBR2 as seed ortholog is 100%.

Group of orthologs #654. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 T.nigroviridis:562

F6T283              	100.00%		H3CE57              	100.00%
Bootstrap support for F6T283 as seed ortholog is 100%.
Bootstrap support for H3CE57 as seed ortholog is 100%.

Group of orthologs #655. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 T.nigroviridis:688

F6ZGD4              	100.00%		H3D060              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for H3D060 as seed ortholog is 100%.

Group of orthologs #656. Best score 687 bits
Score difference with first non-orthologous sequence - C.intestinalis:687 T.nigroviridis:687

F6Y3K6              	100.00%		H3CNZ4              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for H3CNZ4 as seed ortholog is 100%.

Group of orthologs #657. Best score 687 bits
Score difference with first non-orthologous sequence - C.intestinalis:687 T.nigroviridis:687

F6USX3              	100.00%		H3D8F0              	100.00%
Bootstrap support for F6USX3 as seed ortholog is 100%.
Bootstrap support for H3D8F0 as seed ortholog is 100%.

Group of orthologs #658. Best score 687 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:42

F6T718              	100.00%		H3DMZ8              	100.00%
Bootstrap support for F6T718 as seed ortholog is 100%.
Bootstrap support for H3DMZ8 as seed ortholog is 88%.

Group of orthologs #659. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 T.nigroviridis:686

H2Y3A3              	100.00%		H3D2U6              	100.00%
Bootstrap support for H2Y3A3 as seed ortholog is 100%.
Bootstrap support for H3D2U6 as seed ortholog is 100%.

Group of orthologs #660. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 T.nigroviridis:131

F6ZDC7              	100.00%		H3DL71              	100.00%
                    	       		H3DJQ0              	6.47%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for H3DL71 as seed ortholog is 99%.

Group of orthologs #661. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 T.nigroviridis:685

F6WHS8              	100.00%		H3C2W1              	100.00%
Bootstrap support for F6WHS8 as seed ortholog is 100%.
Bootstrap support for H3C2W1 as seed ortholog is 100%.

Group of orthologs #662. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 T.nigroviridis:685

F6ZF70              	100.00%		H3D1C5              	100.00%
Bootstrap support for F6ZF70 as seed ortholog is 100%.
Bootstrap support for H3D1C5 as seed ortholog is 100%.

Group of orthologs #663. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 T.nigroviridis:135

F6VP00              	100.00%		H3CN55              	100.00%
                    	       		H3C5K7              	10.62%
Bootstrap support for F6VP00 as seed ortholog is 100%.
Bootstrap support for H3CN55 as seed ortholog is 97%.

Group of orthologs #664. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 T.nigroviridis:640

F6SKU8              	100.00%		H3CT15              	100.00%
Bootstrap support for F6SKU8 as seed ortholog is 100%.
Bootstrap support for H3CT15 as seed ortholog is 100%.

Group of orthologs #665. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 T.nigroviridis:131

F6UUQ0              	100.00%		H3D823              	100.00%
Bootstrap support for F6UUQ0 as seed ortholog is 100%.
Bootstrap support for H3D823 as seed ortholog is 99%.

Group of orthologs #666. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 T.nigroviridis:38

H2XPX0              	100.00%		H3DH65              	100.00%
Bootstrap support for H2XPX0 as seed ortholog is 100%.
Bootstrap support for H3DH65 as seed ortholog is 74%.
Alternative seed ortholog is H3CBN9 (38 bits away from this cluster)

Group of orthologs #667. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 T.nigroviridis:683

F7AP89              	100.00%		H3DL83              	100.00%
                    	       		H3DJP5              	33.38%
                    	       		H3D0H2              	27.58%
                    	       		H3CS42              	26.07%
Bootstrap support for F7AP89 as seed ortholog is 100%.
Bootstrap support for H3DL83 as seed ortholog is 100%.

Group of orthologs #668. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 T.nigroviridis:683

F6X7U3              	100.00%		H3CRS0              	100.00%
Bootstrap support for F6X7U3 as seed ortholog is 100%.
Bootstrap support for H3CRS0 as seed ortholog is 100%.

Group of orthologs #669. Best score 682 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 T.nigroviridis:554

F6YDF4              	100.00%		H3CCF6              	100.00%
Bootstrap support for F6YDF4 as seed ortholog is 100%.
Bootstrap support for H3CCF6 as seed ortholog is 100%.

Group of orthologs #670. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:302

H2XLI9              	100.00%		H3CTP7              	100.00%
                    	       		H3DBT6              	26.23%
                    	       		H3D6X2              	15.82%
Bootstrap support for H2XLI9 as seed ortholog is 100%.
Bootstrap support for H3CTP7 as seed ortholog is 100%.

Group of orthologs #671. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 T.nigroviridis:681

H2Y2S2              	100.00%		H3CQM8              	100.00%
Bootstrap support for H2Y2S2 as seed ortholog is 100%.
Bootstrap support for H3CQM8 as seed ortholog is 100%.

Group of orthologs #672. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:533

F7AHA3              	100.00%		H3DL93              	100.00%
Bootstrap support for F7AHA3 as seed ortholog is 100%.
Bootstrap support for H3DL93 as seed ortholog is 100%.

Group of orthologs #673. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 T.nigroviridis:680

F7A961              	100.00%		H3BZU4              	100.00%
                    	       		H3BWP8              	12.37%
Bootstrap support for F7A961 as seed ortholog is 100%.
Bootstrap support for H3BZU4 as seed ortholog is 100%.

Group of orthologs #674. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:462

F6YGC1              	100.00%		H3CBD4              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 100%.
Bootstrap support for H3CBD4 as seed ortholog is 100%.

Group of orthologs #675. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 T.nigroviridis:679

F6YU96              	100.00%		H3DG63              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for H3DG63 as seed ortholog is 100%.

Group of orthologs #676. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:678 T.nigroviridis:678

F6YNG6              	100.00%		H3CR85              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 100%.
Bootstrap support for H3CR85 as seed ortholog is 100%.

Group of orthologs #677. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 T.nigroviridis:262

F6QID5              	100.00%		H3DR89              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for H3DR89 as seed ortholog is 100%.

Group of orthologs #678. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 T.nigroviridis:251

F6U465              	100.00%		H3D1K3              	100.00%
                    	       		H3CMF2              	16.98%
Bootstrap support for F6U465 as seed ortholog is 100%.
Bootstrap support for H3D1K3 as seed ortholog is 99%.

Group of orthologs #679. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 T.nigroviridis:677

F6XRI7              	100.00%		H3CWE6              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for H3CWE6 as seed ortholog is 100%.

Group of orthologs #680. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:615 T.nigroviridis:320

F6YKJ2              	100.00%		H3CFI7              	100.00%
                    	       		H3C1M3              	13.68%
Bootstrap support for F6YKJ2 as seed ortholog is 100%.
Bootstrap support for H3CFI7 as seed ortholog is 100%.

Group of orthologs #681. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:184

F6U2S1              	100.00%		H3D0Y5              	100.00%
                    	       		H3BYV5              	26.27%
Bootstrap support for F6U2S1 as seed ortholog is 99%.
Bootstrap support for H3D0Y5 as seed ortholog is 99%.

Group of orthologs #682. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 T.nigroviridis:676

F6X3A4              	100.00%		H3CFH9              	100.00%
Bootstrap support for F6X3A4 as seed ortholog is 100%.
Bootstrap support for H3CFH9 as seed ortholog is 100%.

Group of orthologs #683. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 T.nigroviridis:676

F6XCK4              	100.00%		H3CM65              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 100%.
Bootstrap support for H3CM65 as seed ortholog is 100%.

Group of orthologs #684. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 T.nigroviridis:676

F6PRY2              	100.00%		H3DD02              	100.00%
Bootstrap support for F6PRY2 as seed ortholog is 100%.
Bootstrap support for H3DD02 as seed ortholog is 100%.

Group of orthologs #685. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:525

F6XKP0              	100.00%		H3DJY6              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for H3DJY6 as seed ortholog is 100%.

Group of orthologs #686. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:104

F6VS92              	100.00%		H3DAJ5              	100.00%
F6RFT0              	48.27%		
H2XN22              	8.08%		
Bootstrap support for F6VS92 as seed ortholog is 99%.
Bootstrap support for H3DAJ5 as seed ortholog is 99%.

Group of orthologs #687. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 T.nigroviridis:394

F6ZRQ5              	100.00%		H3CDE8              	100.00%
Bootstrap support for F6ZRQ5 as seed ortholog is 100%.
Bootstrap support for H3CDE8 as seed ortholog is 100%.

Group of orthologs #688. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 T.nigroviridis:484

F6R472              	100.00%		H3DCU8              	100.00%
Bootstrap support for F6R472 as seed ortholog is 100%.
Bootstrap support for H3DCU8 as seed ortholog is 100%.

Group of orthologs #689. Best score 674 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 T.nigroviridis:115

F6XIK7              	100.00%		H3CZX7              	100.00%
Bootstrap support for F6XIK7 as seed ortholog is 100%.
Bootstrap support for H3CZX7 as seed ortholog is 99%.

Group of orthologs #690. Best score 674 bits
Score difference with first non-orthologous sequence - C.intestinalis:674 T.nigroviridis:674

H2XXJ0              	100.00%		H3DIZ4              	100.00%
Bootstrap support for H2XXJ0 as seed ortholog is 100%.
Bootstrap support for H3DIZ4 as seed ortholog is 100%.

Group of orthologs #691. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:116

F6V5B4              	100.00%		H3CPB3              	100.00%
F6SGT8              	34.64%		
Bootstrap support for F6V5B4 as seed ortholog is 99%.
Bootstrap support for H3CPB3 as seed ortholog is 99%.

Group of orthologs #692. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:673 T.nigroviridis:673

F6ZM08              	100.00%		H3CYP3              	100.00%
Bootstrap support for F6ZM08 as seed ortholog is 100%.
Bootstrap support for H3CYP3 as seed ortholog is 100%.

Group of orthologs #693. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:205

F6TSL2              	100.00%		H3DHX6              	100.00%
Bootstrap support for F6TSL2 as seed ortholog is 100%.
Bootstrap support for H3DHX6 as seed ortholog is 100%.

Group of orthologs #694. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:78

F6XTN6              	100.00%		H3DEM3              	100.00%
                    	       		H3CGR3              	27.47%
Bootstrap support for F6XTN6 as seed ortholog is 99%.
Bootstrap support for H3DEM3 as seed ortholog is 94%.

Group of orthologs #695. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 T.nigroviridis:424

F6S8N9              	100.00%		H3CVK4              	100.00%
Bootstrap support for F6S8N9 as seed ortholog is 100%.
Bootstrap support for H3CVK4 as seed ortholog is 100%.

Group of orthologs #696. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 T.nigroviridis:672

H2XWM6              	100.00%		H3CGZ6              	100.00%
Bootstrap support for H2XWM6 as seed ortholog is 100%.
Bootstrap support for H3CGZ6 as seed ortholog is 100%.

Group of orthologs #697. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 T.nigroviridis:608

F7ABK2              	100.00%		H3D7J4              	100.00%
Bootstrap support for F7ABK2 as seed ortholog is 100%.
Bootstrap support for H3D7J4 as seed ortholog is 100%.

Group of orthologs #698. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 T.nigroviridis:615

F6SG33              	100.00%		H3CY30              	100.00%
                    	       		H3DKE5              	44.42%
Bootstrap support for F6SG33 as seed ortholog is 100%.
Bootstrap support for H3CY30 as seed ortholog is 100%.

Group of orthologs #699. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 T.nigroviridis:45

F6YKX8              	100.00%		H3D119              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for H3D119 as seed ortholog is 93%.

Group of orthologs #700. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 T.nigroviridis:414

F6YDG7              	100.00%		H3D496              	100.00%
Bootstrap support for F6YDG7 as seed ortholog is 99%.
Bootstrap support for H3D496 as seed ortholog is 100%.

Group of orthologs #701. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 T.nigroviridis:671

F6SQE9              	100.00%		H3DNX5              	100.00%
Bootstrap support for F6SQE9 as seed ortholog is 100%.
Bootstrap support for H3DNX5 as seed ortholog is 100%.

Group of orthologs #702. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:669 T.nigroviridis:669

H2XPB4              	100.00%		H3CV55              	100.00%
                    	       		H3D5B8              	33.58%
Bootstrap support for H2XPB4 as seed ortholog is 100%.
Bootstrap support for H3CV55 as seed ortholog is 100%.

Group of orthologs #703. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 T.nigroviridis:161

F6XVE4              	100.00%		H3DJZ4              	100.00%
Bootstrap support for F6XVE4 as seed ortholog is 100%.
Bootstrap support for H3DJZ4 as seed ortholog is 99%.

Group of orthologs #704. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:546

F7AMH0              	100.00%		H3CX80              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for H3CX80 as seed ortholog is 100%.

Group of orthologs #705. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 T.nigroviridis:667

F6U8B5              	100.00%		H3C4B8              	100.00%
                    	       		H3CIN6              	23.34%
Bootstrap support for F6U8B5 as seed ortholog is 100%.
Bootstrap support for H3C4B8 as seed ortholog is 100%.

Group of orthologs #706. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 T.nigroviridis:667

F7B4V9              	100.00%		H3CJ79              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for H3CJ79 as seed ortholog is 100%.

Group of orthologs #707. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 T.nigroviridis:666

H2XVK2              	100.00%		H3CWE5              	100.00%
H2XQD5              	34.87%		H3DGV4              	17.39%
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for H3CWE5 as seed ortholog is 100%.

Group of orthologs #708. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:338

F6UHH9              	100.00%		H3DJF8              	100.00%
                    	       		H3CL71              	10.49%
Bootstrap support for F6UHH9 as seed ortholog is 100%.
Bootstrap support for H3DJF8 as seed ortholog is 100%.

Group of orthologs #709. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:244

H2Y1L4              	100.00%		H3CMF8              	100.00%
Bootstrap support for H2Y1L4 as seed ortholog is 99%.
Bootstrap support for H3CMF8 as seed ortholog is 99%.

Group of orthologs #710. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 T.nigroviridis:417

F6R2Y1              	100.00%		H3DBI9              	100.00%
                    	       		H3DNM0              	22.02%
                    	       		H3DG90              	19.03%
                    	       		H3DC71              	13.12%
Bootstrap support for F6R2Y1 as seed ortholog is 100%.
Bootstrap support for H3DBI9 as seed ortholog is 100%.

Group of orthologs #711. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 T.nigroviridis:395

F6WMK2              	100.00%		H3CWV5              	100.00%
Bootstrap support for F6WMK2 as seed ortholog is 100%.
Bootstrap support for H3CWV5 as seed ortholog is 100%.

Group of orthologs #712. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 T.nigroviridis:226

F7AQA9              	100.00%		H3CRT8              	100.00%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for H3CRT8 as seed ortholog is 100%.

Group of orthologs #713. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 T.nigroviridis:663

F6QFH5              	100.00%		H3D1X0              	100.00%
Bootstrap support for F6QFH5 as seed ortholog is 100%.
Bootstrap support for H3D1X0 as seed ortholog is 100%.

Group of orthologs #714. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 T.nigroviridis:663

F6ZWW6              	100.00%		H3CJC9              	100.00%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for H3CJC9 as seed ortholog is 100%.

Group of orthologs #715. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 T.nigroviridis:591

F6ZHD7              	100.00%		H3CQA6              	100.00%
Bootstrap support for F6ZHD7 as seed ortholog is 100%.
Bootstrap support for H3CQA6 as seed ortholog is 100%.

Group of orthologs #716. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 T.nigroviridis:590

H2Y107              	100.00%		H3CGL9              	100.00%
                    	       		H3CT83              	50.00%
Bootstrap support for H2Y107 as seed ortholog is 100%.
Bootstrap support for H3CGL9 as seed ortholog is 100%.

Group of orthologs #717. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:661 T.nigroviridis:661

F6THM1              	100.00%		H3CUI2              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for H3CUI2 as seed ortholog is 100%.

Group of orthologs #718. Best score 660 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:42

F6QN34              	100.00%		H3BX90              	100.00%
Bootstrap support for F6QN34 as seed ortholog is 99%.
Bootstrap support for H3BX90 as seed ortholog is 83%.

Group of orthologs #719. Best score 660 bits
Score difference with first non-orthologous sequence - C.intestinalis:660 T.nigroviridis:660

F6QY24              	100.00%		H3DA40              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for H3DA40 as seed ortholog is 100%.

Group of orthologs #720. Best score 660 bits
Score difference with first non-orthologous sequence - C.intestinalis:660 T.nigroviridis:660

F6UJ17              	100.00%		H3DEV8              	100.00%
Bootstrap support for F6UJ17 as seed ortholog is 100%.
Bootstrap support for H3DEV8 as seed ortholog is 100%.

Group of orthologs #721. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 T.nigroviridis:561

H2XUE6              	100.00%		H3C5X5              	100.00%
                    	       		H3DIX4              	5.50%
Bootstrap support for H2XUE6 as seed ortholog is 100%.
Bootstrap support for H3C5X5 as seed ortholog is 100%.

Group of orthologs #722. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 T.nigroviridis:526

H2Y1W2              	100.00%		H3DI91              	100.00%
                    	       		H3DPN5              	24.52%
Bootstrap support for H2Y1W2 as seed ortholog is 100%.
Bootstrap support for H3DI91 as seed ortholog is 100%.

Group of orthologs #723. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 T.nigroviridis:659

F6T5V0              	100.00%		H3CJ82              	100.00%
Bootstrap support for F6T5V0 as seed ortholog is 100%.
Bootstrap support for H3CJ82 as seed ortholog is 100%.

Group of orthologs #724. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 T.nigroviridis:659

F6SYF4              	100.00%		H3D6C5              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for H3D6C5 as seed ortholog is 100%.

Group of orthologs #725. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 T.nigroviridis:337

F6T060              	100.00%		H3DA92              	100.00%
F6SZU4              	51.96%		H3BXM1              	23.25%
                    	       		H3CZQ8              	22.27%
                    	       		H3DF83              	16.67%
Bootstrap support for F6T060 as seed ortholog is 100%.
Bootstrap support for H3DA92 as seed ortholog is 100%.

Group of orthologs #726. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 T.nigroviridis:658

F6ZXH6              	100.00%		H3CIU1              	100.00%
                    	       		H3CHW7              	24.38%
Bootstrap support for F6ZXH6 as seed ortholog is 100%.
Bootstrap support for H3CIU1 as seed ortholog is 100%.

Group of orthologs #727. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 T.nigroviridis:368

F6V6X8              	100.00%		H3DK37              	100.00%
                    	       		H3DFR7              	21.46%
Bootstrap support for F6V6X8 as seed ortholog is 100%.
Bootstrap support for H3DK37 as seed ortholog is 100%.

Group of orthologs #728. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 T.nigroviridis:658

Q4H372              	100.00%		H3DPM5              	100.00%
                    	       		H3CG45              	15.14%
Bootstrap support for Q4H372 as seed ortholog is 100%.
Bootstrap support for H3DPM5 as seed ortholog is 100%.

Group of orthologs #729. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 T.nigroviridis:104

F6ZBI9              	100.00%		H3DDZ0              	100.00%
Bootstrap support for F6ZBI9 as seed ortholog is 100%.
Bootstrap support for H3DDZ0 as seed ortholog is 99%.

Group of orthologs #730. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 T.nigroviridis:658

H2Y3P6              	100.00%		H3DEA5              	100.00%
Bootstrap support for H2Y3P6 as seed ortholog is 100%.
Bootstrap support for H3DEA5 as seed ortholog is 100%.

Group of orthologs #731. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:405

F6PSM8              	100.00%		H3CYX2              	100.00%
                    	       		H3D099              	24.04%
Bootstrap support for F6PSM8 as seed ortholog is 100%.
Bootstrap support for H3CYX2 as seed ortholog is 100%.

Group of orthologs #732. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:657 T.nigroviridis:657

F6UDJ0              	100.00%		H3D3G1              	100.00%
Bootstrap support for F6UDJ0 as seed ortholog is 100%.
Bootstrap support for H3D3G1 as seed ortholog is 100%.

Group of orthologs #733. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:657 T.nigroviridis:564

F6YC60              	100.00%		H3CZY6              	100.00%
Bootstrap support for F6YC60 as seed ortholog is 100%.
Bootstrap support for H3CZY6 as seed ortholog is 100%.

Group of orthologs #734. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:97

F6TXB9              	100.00%		H3DLN8              	100.00%
F6XP43              	30.16%		H3DIA7              	28.85%
                    	       		H3DIL2              	17.79%
                    	       		H3DHW5              	14.32%
Bootstrap support for F6TXB9 as seed ortholog is 100%.
Bootstrap support for H3DLN8 as seed ortholog is 99%.

Group of orthologs #735. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 T.nigroviridis:656

H2XYE1              	100.00%		H3DBG9              	100.00%
                    	       		H3CJG0              	10.16%
Bootstrap support for H2XYE1 as seed ortholog is 100%.
Bootstrap support for H3DBG9 as seed ortholog is 100%.

Group of orthologs #736. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 T.nigroviridis:656

F6TJ71              	100.00%		H3CW61              	100.00%
Bootstrap support for F6TJ71 as seed ortholog is 100%.
Bootstrap support for H3CW61 as seed ortholog is 100%.

Group of orthologs #737. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 T.nigroviridis:656

F6QBM2              	100.00%		H3DFW2              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for H3DFW2 as seed ortholog is 100%.

Group of orthologs #738. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 T.nigroviridis:656

F7B9N2              	100.00%		H3CLZ2              	100.00%
Bootstrap support for F7B9N2 as seed ortholog is 100%.
Bootstrap support for H3CLZ2 as seed ortholog is 100%.

Group of orthologs #739. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 T.nigroviridis:655

F6S6E8              	100.00%		H3D560              	100.00%
                    	       		H3BYG8              	16.89%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for H3D560 as seed ortholog is 100%.

Group of orthologs #740. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:427

F7B898              	100.00%		H3CD26              	100.00%
                    	       		Q4RRC6              	39.38%
Bootstrap support for F7B898 as seed ortholog is 100%.
Bootstrap support for H3CD26 as seed ortholog is 100%.

Group of orthologs #741. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 T.nigroviridis:655

F6Q8U3              	100.00%		H3C4T9              	100.00%
Bootstrap support for F6Q8U3 as seed ortholog is 100%.
Bootstrap support for H3C4T9 as seed ortholog is 100%.

Group of orthologs #742. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 T.nigroviridis:655

F6T6E4              	100.00%		H3CZV4              	100.00%
Bootstrap support for F6T6E4 as seed ortholog is 100%.
Bootstrap support for H3CZV4 as seed ortholog is 100%.

Group of orthologs #743. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 T.nigroviridis:655

F6WUM1              	100.00%		Q4RHG7              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for Q4RHG7 as seed ortholog is 100%.

Group of orthologs #744. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 T.nigroviridis:654

F6U5F1              	100.00%		H3CMQ4              	100.00%
                    	       		H3CMB6              	63.61%
Bootstrap support for F6U5F1 as seed ortholog is 100%.
Bootstrap support for H3CMQ4 as seed ortholog is 100%.

Group of orthologs #745. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 T.nigroviridis:654

F6SKI3              	100.00%		H3DHH0              	100.00%
                    	       		H3CZ85              	34.57%
Bootstrap support for F6SKI3 as seed ortholog is 100%.
Bootstrap support for H3DHH0 as seed ortholog is 100%.

Group of orthologs #746. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 T.nigroviridis:46

F6XBC5              	100.00%		H3DCD1              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for H3DCD1 as seed ortholog is 86%.

Group of orthologs #747. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:653

H2XUG5              	100.00%		H3BZS9              	100.00%
Bootstrap support for H2XUG5 as seed ortholog is 100%.
Bootstrap support for H3BZS9 as seed ortholog is 100%.

Group of orthologs #748. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 T.nigroviridis:147

F6V549              	100.00%		H3DGH3              	100.00%
Bootstrap support for F6V549 as seed ortholog is 100%.
Bootstrap support for H3DGH3 as seed ortholog is 99%.

Group of orthologs #749. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 T.nigroviridis:653

F7BL51              	100.00%		H3D1Q6              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for H3D1Q6 as seed ortholog is 100%.

Group of orthologs #750. Best score 652 bits
Score difference with first non-orthologous sequence - C.intestinalis:652 T.nigroviridis:455

F6VEU9              	100.00%		H3DL57              	100.00%
                    	       		H3CG10              	19.90%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for H3DL57 as seed ortholog is 100%.

Group of orthologs #751. Best score 652 bits
Score difference with first non-orthologous sequence - C.intestinalis:652 T.nigroviridis:219

F6W8D0              	100.00%		H3DCN8              	100.00%
Bootstrap support for F6W8D0 as seed ortholog is 100%.
Bootstrap support for H3DCN8 as seed ortholog is 99%.

Group of orthologs #752. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 T.nigroviridis:651

F6S902              	100.00%		H3CHA3              	100.00%
Bootstrap support for F6S902 as seed ortholog is 100%.
Bootstrap support for H3CHA3 as seed ortholog is 100%.

Group of orthologs #753. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 T.nigroviridis:651

F6VMS4              	100.00%		H3CNP7              	100.00%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for H3CNP7 as seed ortholog is 100%.

Group of orthologs #754. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 T.nigroviridis:651

F6WY47              	100.00%		H3CK30              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 100%.
Bootstrap support for H3CK30 as seed ortholog is 100%.

Group of orthologs #755. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 T.nigroviridis:651

F7A5Y1              	100.00%		H3CNC1              	100.00%
Bootstrap support for F7A5Y1 as seed ortholog is 100%.
Bootstrap support for H3CNC1 as seed ortholog is 100%.

Group of orthologs #756. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 T.nigroviridis:573

F7ABS5              	100.00%		H3DEG1              	100.00%
Bootstrap support for F7ABS5 as seed ortholog is 100%.
Bootstrap support for H3DEG1 as seed ortholog is 100%.

Group of orthologs #757. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:650 T.nigroviridis:650

F6TAK3              	100.00%		H3CBR6              	100.00%
                    	       		H3DHW2              	39.99%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for H3CBR6 as seed ortholog is 100%.

Group of orthologs #758. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 T.nigroviridis:481

Q9NL43              	100.00%		H3D8U7              	100.00%
                    	       		H3CCY4              	6.50%
Bootstrap support for Q9NL43 as seed ortholog is 100%.
Bootstrap support for H3D8U7 as seed ortholog is 100%.

Group of orthologs #759. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:650

F6YWP5              	100.00%		H3DJS5              	100.00%
Bootstrap support for F6YWP5 as seed ortholog is 100%.
Bootstrap support for H3DJS5 as seed ortholog is 100%.

Group of orthologs #760. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:125

Q4H2T5              	100.00%		H3CSN4              	100.00%
                    	       		H3D1J5              	40.56%
                    	       		H3CGW0              	32.93%
Bootstrap support for Q4H2T5 as seed ortholog is 99%.
Bootstrap support for H3CSN4 as seed ortholog is 99%.

Group of orthologs #761. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:649

F6XG08              	100.00%		H3CR31              	100.00%
                    	       		H3D7Z7              	21.23%
Bootstrap support for F6XG08 as seed ortholog is 100%.
Bootstrap support for H3CR31 as seed ortholog is 100%.

Group of orthologs #762. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 T.nigroviridis:359

F6TTZ5              	100.00%		H3CCG6              	100.00%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for H3CCG6 as seed ortholog is 100%.

Group of orthologs #763. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 T.nigroviridis:649

F6S8S3              	100.00%		H3D6E6              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for H3D6E6 as seed ortholog is 100%.

Group of orthologs #764. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 T.nigroviridis:552

H2Y130              	100.00%		H3CAY7              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for H3CAY7 as seed ortholog is 100%.

Group of orthologs #765. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 T.nigroviridis:649

F6WY01              	100.00%		H3DK75              	100.00%
Bootstrap support for F6WY01 as seed ortholog is 100%.
Bootstrap support for H3DK75 as seed ortholog is 100%.

Group of orthologs #766. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 T.nigroviridis:549

F6ZCE0              	100.00%		H3CDM8              	100.00%
                    	       		H3CXF8              	38.39%
                    	       		H3CN31              	22.99%
Bootstrap support for F6ZCE0 as seed ortholog is 100%.
Bootstrap support for H3CDM8 as seed ortholog is 100%.

Group of orthologs #767. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:419

F6Q0M2              	100.00%		H3CAZ7              	100.00%
                    	       		H3C8L1              	51.03%
Bootstrap support for F6Q0M2 as seed ortholog is 100%.
Bootstrap support for H3CAZ7 as seed ortholog is 100%.

Group of orthologs #768. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 T.nigroviridis:181

Q8T3S5              	100.00%		H3CDS9              	100.00%
                    	       		H3DM83              	29.03%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for H3CDS9 as seed ortholog is 100%.

Group of orthologs #769. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 T.nigroviridis:648

F6QIK7              	100.00%		H3CF18              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for H3CF18 as seed ortholog is 100%.

Group of orthologs #770. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:145

F6XZ93              	100.00%		Q4RXG6              	100.00%
                    	       		H3CIH8              	43.06%
                    	       		H3CCD8              	27.31%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for Q4RXG6 as seed ortholog is 99%.

Group of orthologs #771. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 T.nigroviridis:647

F6Q601              	100.00%		H3CY85              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for H3CY85 as seed ortholog is 100%.

Group of orthologs #772. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 T.nigroviridis:337

F6VZ84              	100.00%		H3D3G4              	100.00%
Bootstrap support for F6VZ84 as seed ortholog is 100%.
Bootstrap support for H3D3G4 as seed ortholog is 100%.

Group of orthologs #773. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 T.nigroviridis:599

F6Z0E0              	100.00%		H3DBT5              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for H3DBT5 as seed ortholog is 100%.

Group of orthologs #774. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 T.nigroviridis:358

H2XXR6              	100.00%		H3DCK3              	100.00%
                    	       		H3C6U0              	53.85%
                    	       		H3D1E7              	14.73%
                    	       		H3CCL0              	6.26%
Bootstrap support for H2XXR6 as seed ortholog is 100%.
Bootstrap support for H3DCK3 as seed ortholog is 100%.

Group of orthologs #775. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 T.nigroviridis:646

F6SHG8              	100.00%		H3CDX4              	100.00%
Bootstrap support for F6SHG8 as seed ortholog is 100%.
Bootstrap support for H3CDX4 as seed ortholog is 100%.

Group of orthologs #776. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 T.nigroviridis:646

F6Y5C7              	100.00%		H3CRU8              	100.00%
Bootstrap support for F6Y5C7 as seed ortholog is 100%.
Bootstrap support for H3CRU8 as seed ortholog is 100%.

Group of orthologs #777. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 T.nigroviridis:646

F6SID0              	100.00%		Q4T4X5              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for Q4T4X5 as seed ortholog is 100%.

Group of orthologs #778. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:644 T.nigroviridis:644

F6YPY1              	100.00%		H3DIV3              	100.00%
                    	       		H3BZB0              	47.60%
Bootstrap support for F6YPY1 as seed ortholog is 100%.
Bootstrap support for H3DIV3 as seed ortholog is 100%.

Group of orthologs #779. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 T.nigroviridis:502

H2XLI2              	100.00%		Q4RJN5              	100.00%
                    	       		H3BXK8              	77.78%
Bootstrap support for H2XLI2 as seed ortholog is 100%.
Bootstrap support for Q4RJN5 as seed ortholog is 100%.

Group of orthologs #780. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 T.nigroviridis:80

H2XJF4              	100.00%		H3CL90              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for H3CL90 as seed ortholog is 98%.

Group of orthologs #781. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 T.nigroviridis:643

F6VYY7              	100.00%		H3DC79              	100.00%
Bootstrap support for F6VYY7 as seed ortholog is 100%.
Bootstrap support for H3DC79 as seed ortholog is 100%.

Group of orthologs #782. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 T.nigroviridis:547

Q1RLA7              	100.00%		H3CT21              	100.00%
Bootstrap support for Q1RLA7 as seed ortholog is 100%.
Bootstrap support for H3CT21 as seed ortholog is 100%.

Group of orthologs #783. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:642 T.nigroviridis:426

F6RCR9              	100.00%		H3CPW6              	100.00%
                    	       		H3CMP8              	24.72%
Bootstrap support for F6RCR9 as seed ortholog is 100%.
Bootstrap support for H3CPW6 as seed ortholog is 100%.

Group of orthologs #784. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 T.nigroviridis:642

F6WBG2              	100.00%		H3CP54              	100.00%
                    	       		H3CA53              	33.81%
Bootstrap support for F6WBG2 as seed ortholog is 100%.
Bootstrap support for H3CP54 as seed ortholog is 100%.

Group of orthologs #785. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:642 T.nigroviridis:642

A1XDA5              	100.00%		H3DEQ6              	100.00%
Bootstrap support for A1XDA5 as seed ortholog is 100%.
Bootstrap support for H3DEQ6 as seed ortholog is 100%.

Group of orthologs #786. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 T.nigroviridis:641

F7AQD6              	100.00%		H3DFN9              	100.00%
Bootstrap support for F7AQD6 as seed ortholog is 100%.
Bootstrap support for H3DFN9 as seed ortholog is 100%.

Group of orthologs #787. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 T.nigroviridis:360

H2XU69              	100.00%		H3DIZ7              	100.00%
Bootstrap support for H2XU69 as seed ortholog is 100%.
Bootstrap support for H3DIZ7 as seed ortholog is 100%.

Group of orthologs #788. Best score 640 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 T.nigroviridis:204

F6W6K0              	100.00%		H3CQH4              	100.00%
Bootstrap support for F6W6K0 as seed ortholog is 100%.
Bootstrap support for H3CQH4 as seed ortholog is 100%.

Group of orthologs #789. Best score 640 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 T.nigroviridis:241

F6YUE7              	100.00%		H3DKH6              	100.00%
Bootstrap support for F6YUE7 as seed ortholog is 100%.
Bootstrap support for H3DKH6 as seed ortholog is 100%.

Group of orthologs #790. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 T.nigroviridis:526

F6QNQ9              	100.00%		H3DAK0              	100.00%
                    	       		H3DG58              	100.00%
                    	       		H3D2P3              	23.30%
Bootstrap support for F6QNQ9 as seed ortholog is 100%.
Bootstrap support for H3DAK0 as seed ortholog is 100%.
Bootstrap support for H3DG58 as seed ortholog is 100%.

Group of orthologs #791. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:82

F6YWW9              	100.00%		H3D3P2              	100.00%
F6WDF7              	31.95%		
Bootstrap support for F6YWW9 as seed ortholog is 99%.
Bootstrap support for H3D3P2 as seed ortholog is 94%.

Group of orthologs #792. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 T.nigroviridis:639

F6UF05              	100.00%		H3CSC6              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for H3CSC6 as seed ortholog is 100%.

Group of orthologs #793. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 T.nigroviridis:567

F6WAY8              	100.00%		H3CFQ4              	100.00%
                    	       		Q4RPP8              	39.60%
Bootstrap support for F6WAY8 as seed ortholog is 100%.
Bootstrap support for H3CFQ4 as seed ortholog is 100%.

Group of orthologs #794. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:76

F6XNT2              	100.00%		H3CTJ9              	100.00%
                    	       		H3CE73              	18.29%
Bootstrap support for F6XNT2 as seed ortholog is 77%.
Bootstrap support for H3CTJ9 as seed ortholog is 95%.

Group of orthologs #795. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 T.nigroviridis:638

F6SDU9              	100.00%		H3DCZ7              	100.00%
                    	       		H3CVT2              	21.86%
Bootstrap support for F6SDU9 as seed ortholog is 100%.
Bootstrap support for H3DCZ7 as seed ortholog is 100%.

Group of orthologs #796. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:638

F6UTT2              	100.00%		H3CG91              	100.00%
Bootstrap support for F6UTT2 as seed ortholog is 89%.
Bootstrap support for H3CG91 as seed ortholog is 100%.

Group of orthologs #797. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:638

H2XXL7              	100.00%		H3CZA5              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for H3CZA5 as seed ortholog is 100%.

Group of orthologs #798. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 T.nigroviridis:638

Q1RLD5              	100.00%		H3CUD0              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for H3CUD0 as seed ortholog is 100%.

Group of orthologs #799. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 T.nigroviridis:637

F6YX67              	100.00%		H3D4U0              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for H3D4U0 as seed ortholog is 100%.

Group of orthologs #800. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:456

H2XJZ4              	100.00%		H3CYQ0              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 100%.
Bootstrap support for H3CYQ0 as seed ortholog is 100%.

Group of orthologs #801. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:295

F6ZXE7              	100.00%		H3DCV1              	100.00%
Bootstrap support for F6ZXE7 as seed ortholog is 100%.
Bootstrap support for H3DCV1 as seed ortholog is 100%.

Group of orthologs #802. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 T.nigroviridis:636

H2Y2K4              	100.00%		H3CF93              	100.00%
Bootstrap support for H2Y2K4 as seed ortholog is 100%.
Bootstrap support for H3CF93 as seed ortholog is 100%.

Group of orthologs #803. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:234

F6QWQ4              	100.00%		H3DA26              	100.00%
Bootstrap support for F6QWQ4 as seed ortholog is 99%.
Bootstrap support for H3DA26 as seed ortholog is 99%.

Group of orthologs #804. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 T.nigroviridis:635

F6X882              	100.00%		H3CYU1              	100.00%
Bootstrap support for F6X882 as seed ortholog is 100%.
Bootstrap support for H3CYU1 as seed ortholog is 100%.

Group of orthologs #805. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 T.nigroviridis:305

F6S4F7              	100.00%		H3DQB6              	100.00%
                    	       		H3CIA6              	38.55%
                    	       		H3CFX2              	38.26%
Bootstrap support for F6S4F7 as seed ortholog is 100%.
Bootstrap support for H3DQB6 as seed ortholog is 100%.

Group of orthologs #806. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 T.nigroviridis:634

F6S2V8              	100.00%		H3DEI7              	100.00%
                    	       		H3DFE5              	6.51%
Bootstrap support for F6S2V8 as seed ortholog is 100%.
Bootstrap support for H3DEI7 as seed ortholog is 100%.

Group of orthologs #807. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 T.nigroviridis:634

F6YY15              	100.00%		H3D5V9              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for H3D5V9 as seed ortholog is 100%.

Group of orthologs #808. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 T.nigroviridis:633

H2XVM9              	100.00%		H3CDE6              	100.00%
                    	       		H3DAR1              	33.56%
Bootstrap support for H2XVM9 as seed ortholog is 100%.
Bootstrap support for H3CDE6 as seed ortholog is 100%.

Group of orthologs #809. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:576

F6SDI7              	100.00%		Q4TA90              	100.00%
                    	       		H3D908              	23.83%
Bootstrap support for F6SDI7 as seed ortholog is 100%.
Bootstrap support for Q4TA90 as seed ortholog is 100%.

Group of orthologs #810. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 T.nigroviridis:96

F7ACB9              	100.00%		H3CUP8              	100.00%
                    	       		H3D0F8              	41.32%
                    	       		H3CXI2              	8.68%
Bootstrap support for F7ACB9 as seed ortholog is 100%.
Bootstrap support for H3CUP8 as seed ortholog is 99%.

Group of orthologs #811. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 T.nigroviridis:631

F7AN36              	100.00%		H3DID3              	100.00%
                    	       		H3CJ94              	30.44%
Bootstrap support for F7AN36 as seed ortholog is 100%.
Bootstrap support for H3DID3 as seed ortholog is 100%.

Group of orthologs #812. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 T.nigroviridis:631

F7AGW4              	100.00%		H3C021              	100.00%
Bootstrap support for F7AGW4 as seed ortholog is 100%.
Bootstrap support for H3C021 as seed ortholog is 100%.

Group of orthologs #813. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:83

F7AKC9              	100.00%		H3CG13              	100.00%
Bootstrap support for F7AKC9 as seed ortholog is 100%.
Bootstrap support for H3CG13 as seed ortholog is 96%.

Group of orthologs #814. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 T.nigroviridis:631

F6SVI8              	100.00%		H3D7C2              	100.00%
Bootstrap support for F6SVI8 as seed ortholog is 100%.
Bootstrap support for H3D7C2 as seed ortholog is 100%.

Group of orthologs #815. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 T.nigroviridis:270

H2XZY0              	100.00%		H3D150              	100.00%
Bootstrap support for H2XZY0 as seed ortholog is 100%.
Bootstrap support for H3D150 as seed ortholog is 100%.

Group of orthologs #816. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:90

F6WX88              	100.00%		H3CV15              	100.00%
Bootstrap support for F6WX88 as seed ortholog is 99%.
Bootstrap support for H3CV15 as seed ortholog is 97%.

Group of orthologs #817. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 T.nigroviridis:129

F7AHE5              	100.00%		H3D6I1              	100.00%
Bootstrap support for F7AHE5 as seed ortholog is 100%.
Bootstrap support for H3D6I1 as seed ortholog is 99%.

Group of orthologs #818. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 T.nigroviridis:529

F7A5V7              	100.00%		Q4SRZ8              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for Q4SRZ8 as seed ortholog is 100%.

Group of orthologs #819. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:210

F6WJF4              	100.00%		H3DCD3              	100.00%
                    	       		H3BY81              	48.07%
                    	       		H3C3H3              	44.74%
Bootstrap support for F6WJF4 as seed ortholog is 99%.
Bootstrap support for H3DCD3 as seed ortholog is 100%.

Group of orthologs #820. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 T.nigroviridis:628

F6XKA2              	100.00%		H3CV39              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for H3CV39 as seed ortholog is 100%.

Group of orthologs #821. Best score 627 bits
Score difference with first non-orthologous sequence - C.intestinalis:627 T.nigroviridis:627

F6WIL6              	100.00%		H3DAI7              	100.00%
Bootstrap support for F6WIL6 as seed ortholog is 100%.
Bootstrap support for H3DAI7 as seed ortholog is 100%.

Group of orthologs #822. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:626 T.nigroviridis:454

H2XMT7              	100.00%		H3DPT2              	100.00%
                    	       		H3DPA8              	39.05%
Bootstrap support for H2XMT7 as seed ortholog is 100%.
Bootstrap support for H3DPT2 as seed ortholog is 100%.

Group of orthologs #823. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:21

F6TKP0              	100.00%		H3DEI6              	100.00%
F7B882              	68.17%		H3CUN8              	21.64%
F6TPL8              	55.34%		
Bootstrap support for F6TKP0 as seed ortholog is 99%.
Bootstrap support for H3DEI6 as seed ortholog is 64%.
Alternative seed ortholog is H3CJC3 (21 bits away from this cluster)

Group of orthologs #824. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 T.nigroviridis:625

F6QX56              	100.00%		H3CBZ2              	100.00%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for H3CBZ2 as seed ortholog is 100%.

Group of orthologs #825. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:266

F6TJJ7              	100.00%		H3CS56              	100.00%
Bootstrap support for F6TJJ7 as seed ortholog is 100%.
Bootstrap support for H3CS56 as seed ortholog is 100%.

Group of orthologs #826. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 T.nigroviridis:625

F6SZE1              	100.00%		H3DEQ3              	100.00%
Bootstrap support for F6SZE1 as seed ortholog is 100%.
Bootstrap support for H3DEQ3 as seed ortholog is 100%.

Group of orthologs #827. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 T.nigroviridis:625

H2XWZ3              	100.00%		H3DDM8              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for H3DDM8 as seed ortholog is 100%.

Group of orthologs #828. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 T.nigroviridis:624

F6TG24              	100.00%		H3CAK0              	100.00%
Bootstrap support for F6TG24 as seed ortholog is 100%.
Bootstrap support for H3CAK0 as seed ortholog is 100%.

Group of orthologs #829. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 T.nigroviridis:350

F6WPA9              	100.00%		H3C722              	100.00%
Bootstrap support for F6WPA9 as seed ortholog is 100%.
Bootstrap support for H3C722 as seed ortholog is 100%.

Group of orthologs #830. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:328

F7BBT3              	100.00%		H3BYM5              	100.00%
Bootstrap support for F7BBT3 as seed ortholog is 100%.
Bootstrap support for H3BYM5 as seed ortholog is 100%.

Group of orthologs #831. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:623

F6SVM8              	100.00%		H3DPH5              	100.00%
                    	       		H3DN78              	5.69%
                    	       		H3DPH1              	5.03%
Bootstrap support for F6SVM8 as seed ortholog is 99%.
Bootstrap support for H3DPH5 as seed ortholog is 100%.

Group of orthologs #832. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 T.nigroviridis:517

F7A0P7              	100.00%		H3DHQ6              	100.00%
                    	       		H3CR29              	69.96%
                    	       		H3BXH1              	28.69%
Bootstrap support for F7A0P7 as seed ortholog is 100%.
Bootstrap support for H3DHQ6 as seed ortholog is 100%.

Group of orthologs #833. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 T.nigroviridis:623

F6YT91              	100.00%		H3CIG1              	100.00%
Bootstrap support for F6YT91 as seed ortholog is 100%.
Bootstrap support for H3CIG1 as seed ortholog is 100%.

Group of orthologs #834. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:622 T.nigroviridis:400

F6XQD4              	100.00%		H3D5R7              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for H3D5R7 as seed ortholog is 100%.

Group of orthologs #835. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:410

F6W6I5              	100.00%		H3DR27              	100.00%
                    	       		H3CQ86              	40.72%
                    	       		H3CPT3              	37.13%
                    	       		H3DDV8              	36.71%
                    	       		H3DKB9              	29.32%
Bootstrap support for F6W6I5 as seed ortholog is 100%.
Bootstrap support for H3DR27 as seed ortholog is 100%.

Group of orthologs #836. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 T.nigroviridis:368

F6YLZ5              	100.00%		H3DL96              	100.00%
                    	       		H3CUH5              	28.39%
                    	       		H3CCA5              	11.68%
Bootstrap support for F6YLZ5 as seed ortholog is 100%.
Bootstrap support for H3DL96 as seed ortholog is 100%.

Group of orthologs #837. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 T.nigroviridis:337

F6V4B3              	100.00%		H3CMI9              	100.00%
                    	       		H3DL95              	5.91%
Bootstrap support for F6V4B3 as seed ortholog is 100%.
Bootstrap support for H3CMI9 as seed ortholog is 100%.

Group of orthologs #838. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 T.nigroviridis:621

H2Y1I7              	100.00%		H3D016              	100.00%
Bootstrap support for H2Y1I7 as seed ortholog is 100%.
Bootstrap support for H3D016 as seed ortholog is 100%.

Group of orthologs #839. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 T.nigroviridis:620

F6YXZ3              	100.00%		H3BWY4              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for H3BWY4 as seed ortholog is 100%.

Group of orthologs #840. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 T.nigroviridis:351

F7A4T6              	100.00%		H3CR27              	100.00%
Bootstrap support for F7A4T6 as seed ortholog is 100%.
Bootstrap support for H3CR27 as seed ortholog is 100%.

Group of orthologs #841. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 T.nigroviridis:620

F6WCM9              	100.00%		H3DE01              	100.00%
Bootstrap support for F6WCM9 as seed ortholog is 100%.
Bootstrap support for H3DE01 as seed ortholog is 100%.

Group of orthologs #842. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 T.nigroviridis:620

H2XZ93              	100.00%		H3CAT9              	100.00%
Bootstrap support for H2XZ93 as seed ortholog is 100%.
Bootstrap support for H3CAT9 as seed ortholog is 100%.

Group of orthologs #843. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 T.nigroviridis:619

F6YMX2              	100.00%		H3D8M7              	100.00%
                    	       		H3DNX9              	37.06%
Bootstrap support for F6YMX2 as seed ortholog is 100%.
Bootstrap support for H3D8M7 as seed ortholog is 100%.

Group of orthologs #844. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 T.nigroviridis:619

H2Y048              	100.00%		Q4RUY4              	100.00%
F6S5A6              	8.37%		
Bootstrap support for H2Y048 as seed ortholog is 100%.
Bootstrap support for Q4RUY4 as seed ortholog is 100%.

Group of orthologs #845. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 T.nigroviridis:337

F6UJS3              	100.00%		H3DJN5              	100.00%
Bootstrap support for F6UJS3 as seed ortholog is 100%.
Bootstrap support for H3DJN5 as seed ortholog is 100%.

Group of orthologs #846. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 T.nigroviridis:542

H2XT62              	100.00%		H3CIC3              	100.00%
Bootstrap support for H2XT62 as seed ortholog is 100%.
Bootstrap support for H3CIC3 as seed ortholog is 100%.

Group of orthologs #847. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:194

F6XLF0              	100.00%		H3D3C5              	100.00%
                    	       		H3CQ96              	30.16%
                    	       		H3D7U7              	6.76%
Bootstrap support for F6XLF0 as seed ortholog is 100%.
Bootstrap support for H3D3C5 as seed ortholog is 100%.

Group of orthologs #848. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 T.nigroviridis:281

F6YPX6              	100.00%		H3CJ77              	100.00%
                    	       		H3DH95              	37.52%
Bootstrap support for F6YPX6 as seed ortholog is 100%.
Bootstrap support for H3CJ77 as seed ortholog is 100%.

Group of orthologs #849. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 T.nigroviridis:618

F6ZTJ9              	100.00%		H3DEK9              	100.00%
Bootstrap support for F6ZTJ9 as seed ortholog is 100%.
Bootstrap support for H3DEK9 as seed ortholog is 100%.

Group of orthologs #850. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:463

F6R6X6              	100.00%		H3C0K1              	100.00%
                    	       		H3BX87              	46.05%
                    	       		H3D3L9              	38.31%
Bootstrap support for F6R6X6 as seed ortholog is 100%.
Bootstrap support for H3C0K1 as seed ortholog is 100%.

Group of orthologs #851. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 T.nigroviridis:49

F6V5P8              	100.00%		H3DE94              	100.00%
                    	       		H3DLG6              	9.32%
Bootstrap support for F6V5P8 as seed ortholog is 100%.
Bootstrap support for H3DE94 as seed ortholog is 94%.

Group of orthologs #852. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 T.nigroviridis:18

F6Y1K6              	100.00%		Q4RG22              	100.00%
F6Q5E4              	43.06%		H3DBR9              	42.86%
                    	       		H3D1L0              	9.52%
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for Q4RG22 as seed ortholog is 80%.

Group of orthologs #853. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 T.nigroviridis:520

H2XYJ2              	100.00%		H3C022              	100.00%
                    	       		H3DGK1              	24.22%
Bootstrap support for H2XYJ2 as seed ortholog is 100%.
Bootstrap support for H3C022 as seed ortholog is 100%.

Group of orthologs #854. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 T.nigroviridis:415

F6W1F7              	100.00%		H3CUS0              	100.00%
Bootstrap support for F6W1F7 as seed ortholog is 100%.
Bootstrap support for H3CUS0 as seed ortholog is 100%.

Group of orthologs #855. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 T.nigroviridis:502

F7A606              	100.00%		H3CX13              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for H3CX13 as seed ortholog is 100%.

Group of orthologs #856. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 T.nigroviridis:616

H2XUU5              	100.00%		H3CQT9              	100.00%
Bootstrap support for H2XUU5 as seed ortholog is 100%.
Bootstrap support for H3CQT9 as seed ortholog is 100%.

Group of orthologs #857. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 T.nigroviridis:544

F6UNP2              	100.00%		H3DCY6              	100.00%
Bootstrap support for F6UNP2 as seed ortholog is 100%.
Bootstrap support for H3DCY6 as seed ortholog is 100%.

Group of orthologs #858. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:453

F6VAT4              	100.00%		Q4SEQ8              	100.00%
                    	       		H3DHH8              	13.11%
Bootstrap support for F6VAT4 as seed ortholog is 100%.
Bootstrap support for Q4SEQ8 as seed ortholog is 100%.

Group of orthologs #859. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 T.nigroviridis:614

F6W1L1              	100.00%		H3CUP7              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for H3CUP7 as seed ortholog is 100%.

Group of orthologs #860. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 T.nigroviridis:613

F6VR09              	100.00%		H3D6Z0              	100.00%
Bootstrap support for F6VR09 as seed ortholog is 100%.
Bootstrap support for H3D6Z0 as seed ortholog is 100%.

Group of orthologs #861. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 T.nigroviridis:613

F6ZTE7              	100.00%		H3CUU5              	100.00%
Bootstrap support for F6ZTE7 as seed ortholog is 100%.
Bootstrap support for H3CUU5 as seed ortholog is 100%.

Group of orthologs #862. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 T.nigroviridis:448

F7B040              	100.00%		H3D826              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for H3D826 as seed ortholog is 100%.

Group of orthologs #863. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:612 T.nigroviridis:70

F6PNS6              	100.00%		Q4SJ84              	100.00%
                    	       		H3CTC8              	23.53%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for Q4SJ84 as seed ortholog is 99%.

Group of orthologs #864. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:612 T.nigroviridis:612

F6WBF5              	100.00%		Q4T049              	100.00%
Bootstrap support for F6WBF5 as seed ortholog is 100%.
Bootstrap support for Q4T049 as seed ortholog is 100%.

Group of orthologs #865. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:376

H2XK60              	100.00%		H3DIW9              	100.00%
Bootstrap support for H2XK60 as seed ortholog is 100%.
Bootstrap support for H3DIW9 as seed ortholog is 100%.

Group of orthologs #866. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 T.nigroviridis:570

H2Y0G9              	100.00%		H3DGW3              	100.00%
                    	       		H3C8D1              	9.19%
Bootstrap support for H2Y0G9 as seed ortholog is 100%.
Bootstrap support for H3DGW3 as seed ortholog is 100%.

Group of orthologs #867. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 T.nigroviridis:611

F6SZ37              	100.00%		H3CZ34              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for H3CZ34 as seed ortholog is 100%.

Group of orthologs #868. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 T.nigroviridis:495

F6WWK0              	100.00%		Q4S349              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 100%.
Bootstrap support for Q4S349 as seed ortholog is 100%.

Group of orthologs #869. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 T.nigroviridis:354

F7BQ75              	100.00%		H3DGS5              	100.00%
Bootstrap support for F7BQ75 as seed ortholog is 100%.
Bootstrap support for H3DGS5 as seed ortholog is 100%.

Group of orthologs #870. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:610

F7B684              	100.00%		H3D6Q2              	100.00%
                    	       		H3DMH2              	24.40%
Bootstrap support for F7B684 as seed ortholog is 100%.
Bootstrap support for H3D6Q2 as seed ortholog is 100%.

Group of orthologs #871. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 T.nigroviridis:140

F6YFU4              	100.00%		H3CVL7              	100.00%
F6YFZ5              	17.37%		
Bootstrap support for F6YFU4 as seed ortholog is 100%.
Bootstrap support for H3CVL7 as seed ortholog is 99%.

Group of orthologs #872. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 T.nigroviridis:500

H2XPW5              	100.00%		H3D8C4              	100.00%
                    	       		H3D9E2              	37.49%
Bootstrap support for H2XPW5 as seed ortholog is 100%.
Bootstrap support for H3D8C4 as seed ortholog is 100%.

Group of orthologs #873. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 T.nigroviridis:608

F6R8L5              	100.00%		H3D051              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for H3D051 as seed ortholog is 100%.

Group of orthologs #874. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 T.nigroviridis:608

F6YHS8              	100.00%		H3CHW8              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for H3CHW8 as seed ortholog is 100%.

Group of orthologs #875. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 T.nigroviridis:345

H2XLM3              	100.00%		H3DGX3              	100.00%
Bootstrap support for H2XLM3 as seed ortholog is 100%.
Bootstrap support for H3DGX3 as seed ortholog is 99%.

Group of orthologs #876. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 T.nigroviridis:333

F6R3K6              	100.00%		H3CVE7              	100.00%
                    	       		H3D880              	56.52%
Bootstrap support for F6R3K6 as seed ortholog is 100%.
Bootstrap support for H3CVE7 as seed ortholog is 100%.

Group of orthologs #877. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 T.nigroviridis:607

F7BNL5              	100.00%		H3CPC5              	100.00%
                    	       		H3CF59              	35.46%
Bootstrap support for F7BNL5 as seed ortholog is 100%.
Bootstrap support for H3CPC5 as seed ortholog is 100%.

Group of orthologs #878. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 T.nigroviridis:607

F6VVR6              	100.00%		H3CDL0              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for H3CDL0 as seed ortholog is 100%.

Group of orthologs #879. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 T.nigroviridis:607

F6UHC9              	100.00%		H3D1K4              	100.00%
Bootstrap support for F6UHC9 as seed ortholog is 100%.
Bootstrap support for H3D1K4 as seed ortholog is 100%.

Group of orthologs #880. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 T.nigroviridis:187

F6UDY1              	100.00%		H3DDW3              	100.00%
Bootstrap support for F6UDY1 as seed ortholog is 100%.
Bootstrap support for H3DDW3 as seed ortholog is 100%.

Group of orthologs #881. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 T.nigroviridis:450

H2XYY6              	100.00%		H3D4E0              	100.00%
Bootstrap support for H2XYY6 as seed ortholog is 100%.
Bootstrap support for H3D4E0 as seed ortholog is 100%.

Group of orthologs #882. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 T.nigroviridis:605

F6UX10              	100.00%		H3CYB9              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for H3CYB9 as seed ortholog is 100%.

Group of orthologs #883. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 T.nigroviridis:366

F6ZQ65              	100.00%		H3CVN5              	100.00%
Bootstrap support for F6ZQ65 as seed ortholog is 100%.
Bootstrap support for H3CVN5 as seed ortholog is 100%.

Group of orthologs #884. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:201

F7BBN7              	100.00%		H3CT02              	100.00%
Bootstrap support for F7BBN7 as seed ortholog is 100%.
Bootstrap support for H3CT02 as seed ortholog is 99%.

Group of orthologs #885. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:25

F6VAS2              	100.00%		H3DF90              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for H3DF90 as seed ortholog is 89%.

Group of orthologs #886. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 T.nigroviridis:387

F6YKT9              	100.00%		H3CPL3              	100.00%
Bootstrap support for F6YKT9 as seed ortholog is 100%.
Bootstrap support for H3CPL3 as seed ortholog is 100%.

Group of orthologs #887. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 T.nigroviridis:138

F6UDR5              	100.00%		H3D4J9              	100.00%
Bootstrap support for F6UDR5 as seed ortholog is 100%.
Bootstrap support for H3D4J9 as seed ortholog is 99%.

Group of orthologs #888. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 T.nigroviridis:602

H2XTT5              	100.00%		H3C6T0              	100.00%
Bootstrap support for H2XTT5 as seed ortholog is 100%.
Bootstrap support for H3C6T0 as seed ortholog is 100%.

Group of orthologs #889. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 T.nigroviridis:463

F6TZD9              	100.00%		H3CF83              	100.00%
Bootstrap support for F6TZD9 as seed ortholog is 100%.
Bootstrap support for H3CF83 as seed ortholog is 100%.

Group of orthologs #890. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:516

F6S3E0              	100.00%		H3D975              	100.00%
Bootstrap support for F6S3E0 as seed ortholog is 100%.
Bootstrap support for H3D975 as seed ortholog is 100%.

Group of orthologs #891. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:599 T.nigroviridis:599

F6SDM6              	100.00%		H3C7Q6              	100.00%
                    	       		H3D4E5              	25.64%
                    	       		H3CXR6              	22.08%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for H3C7Q6 as seed ortholog is 100%.

Group of orthologs #892. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:599 T.nigroviridis:599

F6SDZ0              	100.00%		H3DB29              	100.00%
                    	       		H3CJI7              	10.63%
Bootstrap support for F6SDZ0 as seed ortholog is 100%.
Bootstrap support for H3DB29 as seed ortholog is 100%.

Group of orthologs #893. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 T.nigroviridis:138

F6X0I3              	100.00%		H3D661              	100.00%
                    	       		H3C205              	28.81%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for H3D661 as seed ortholog is 100%.

Group of orthologs #894. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:148

F6SLT5              	100.00%		H3CIK3              	100.00%
Bootstrap support for F6SLT5 as seed ortholog is 99%.
Bootstrap support for H3CIK3 as seed ortholog is 98%.

Group of orthologs #895. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:598 T.nigroviridis:598

F6YQ60              	100.00%		H3C6I7              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for H3C6I7 as seed ortholog is 100%.

Group of orthologs #896. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:598 T.nigroviridis:55

F6WWM2              	100.00%		H3CMK1              	100.00%
Bootstrap support for F6WWM2 as seed ortholog is 100%.
Bootstrap support for H3CMK1 as seed ortholog is 87%.

Group of orthologs #897. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:368

F7AEF7              	100.00%		H3CYR6              	100.00%
Bootstrap support for F7AEF7 as seed ortholog is 100%.
Bootstrap support for H3CYR6 as seed ortholog is 100%.

Group of orthologs #898. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:598 T.nigroviridis:598

F6ZWS5              	100.00%		H3D631              	100.00%
Bootstrap support for F6ZWS5 as seed ortholog is 100%.
Bootstrap support for H3D631 as seed ortholog is 100%.

Group of orthologs #899. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 T.nigroviridis:597

F6YWY7              	100.00%		H3CMZ3              	100.00%
                    	       		H3CNR4              	22.64%
                    	       		H3C1J7              	19.77%
                    	       		H3D4W5              	6.59%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for H3CMZ3 as seed ortholog is 100%.

Group of orthologs #900. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:198

F6TVZ8              	100.00%		H3D7V8              	100.00%
Bootstrap support for F6TVZ8 as seed ortholog is 100%.
Bootstrap support for H3D7V8 as seed ortholog is 100%.

Group of orthologs #901. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 T.nigroviridis:459

F7B7G6              	100.00%		H3D7V1              	100.00%
Bootstrap support for F7B7G6 as seed ortholog is 100%.
Bootstrap support for H3D7V1 as seed ortholog is 100%.

Group of orthologs #902. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 T.nigroviridis:596

F7ACS2              	100.00%		H3C274              	100.00%
Bootstrap support for F7ACS2 as seed ortholog is 100%.
Bootstrap support for H3C274 as seed ortholog is 100%.

Group of orthologs #903. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 T.nigroviridis:432

F6Q106              	100.00%		H3D3D6              	100.00%
Bootstrap support for F6Q106 as seed ortholog is 100%.
Bootstrap support for H3D3D6 as seed ortholog is 100%.

Group of orthologs #904. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 T.nigroviridis:596

F7AHM4              	100.00%		H3CSG3              	100.00%
Bootstrap support for F7AHM4 as seed ortholog is 100%.
Bootstrap support for H3CSG3 as seed ortholog is 100%.

Group of orthologs #905. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 T.nigroviridis:342

F6RNS7              	100.00%		H3CTW0              	100.00%
                    	       		H3DJT3              	24.37%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for H3CTW0 as seed ortholog is 100%.

Group of orthologs #906. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 T.nigroviridis:595

F6R6J0              	100.00%		H3CZ92              	100.00%
Bootstrap support for F6R6J0 as seed ortholog is 100%.
Bootstrap support for H3CZ92 as seed ortholog is 100%.

Group of orthologs #907. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 T.nigroviridis:165

F6V299              	100.00%		H3CR58              	100.00%
Bootstrap support for F6V299 as seed ortholog is 100%.
Bootstrap support for H3CR58 as seed ortholog is 99%.

Group of orthologs #908. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:328

F6PH07              	100.00%		H3CYL5              	100.00%
                    	       		H3CSX4              	58.91%
                    	       		H3D957              	37.98%
                    	       		H3D3P8              	27.13%
Bootstrap support for F6PH07 as seed ortholog is 100%.
Bootstrap support for H3CYL5 as seed ortholog is 100%.

Group of orthologs #909. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 T.nigroviridis:286

Q4H3L5              	100.00%		H3DD22              	100.00%
                    	       		H3D1Z5              	19.39%
Bootstrap support for Q4H3L5 as seed ortholog is 100%.
Bootstrap support for H3DD22 as seed ortholog is 100%.

Group of orthologs #910. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 T.nigroviridis:594

H2XZT6              	100.00%		H3CRI4              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for H3CRI4 as seed ortholog is 100%.

Group of orthologs #911. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 T.nigroviridis:492

F6UGF1              	100.00%		H3D813              	100.00%
                    	       		H3D2D0              	13.26%
Bootstrap support for F6UGF1 as seed ortholog is 100%.
Bootstrap support for H3D813 as seed ortholog is 100%.

Group of orthologs #912. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:537

F6PLA8              	100.00%		H3DMX8              	100.00%
                    	       		H3CW13              	21.43%
Bootstrap support for F6PLA8 as seed ortholog is 100%.
Bootstrap support for H3DMX8 as seed ortholog is 100%.

Group of orthologs #913. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:56

F7A4H3              	100.00%		H3CV07              	100.00%
F6PLF9              	10.03%		
Bootstrap support for F7A4H3 as seed ortholog is 99%.
Bootstrap support for H3CV07 as seed ortholog is 89%.

Group of orthologs #914. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:203

F6Q2J0              	100.00%		H3CBM0              	100.00%
Bootstrap support for F6Q2J0 as seed ortholog is 100%.
Bootstrap support for H3CBM0 as seed ortholog is 100%.

Group of orthologs #915. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 T.nigroviridis:592

F6PKW3              	100.00%		H3D6U1              	100.00%
                    	       		H3CV78              	13.11%
Bootstrap support for F6PKW3 as seed ortholog is 100%.
Bootstrap support for H3D6U1 as seed ortholog is 100%.

Group of orthologs #916. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:229

F7B6X8              	100.00%		H3CQB0              	100.00%
Bootstrap support for F7B6X8 as seed ortholog is 98%.
Bootstrap support for H3CQB0 as seed ortholog is 100%.

Group of orthologs #917. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 T.nigroviridis:442

F6ZN89              	100.00%		H3DGC2              	100.00%
Bootstrap support for F6ZN89 as seed ortholog is 100%.
Bootstrap support for H3DGC2 as seed ortholog is 100%.

Group of orthologs #918. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 T.nigroviridis:47

Q4H3S1              	100.00%		H3CKE1              	100.00%
Bootstrap support for Q4H3S1 as seed ortholog is 100%.
Bootstrap support for H3CKE1 as seed ortholog is 86%.

Group of orthologs #919. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 T.nigroviridis:591

F6QD44              	100.00%		H3CZE4              	100.00%
Bootstrap support for F6QD44 as seed ortholog is 100%.
Bootstrap support for H3CZE4 as seed ortholog is 100%.

Group of orthologs #920. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:431

F6ZUU0              	100.00%		H3D7L9              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 100%.
Bootstrap support for H3D7L9 as seed ortholog is 100%.

Group of orthologs #921. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 T.nigroviridis:231

H2Y169              	100.00%		H3D268              	100.00%
Bootstrap support for H2Y169 as seed ortholog is 100%.
Bootstrap support for H3D268 as seed ortholog is 100%.

Group of orthologs #922. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 T.nigroviridis:435

H2XT39              	100.00%		Q4RYE7              	100.00%
Bootstrap support for H2XT39 as seed ortholog is 100%.
Bootstrap support for Q4RYE7 as seed ortholog is 100%.

Group of orthologs #923. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 T.nigroviridis:328

Q1RL25              	100.00%		H3D559              	100.00%
                    	       		H3DAY2              	17.94%
Bootstrap support for Q1RL25 as seed ortholog is 100%.
Bootstrap support for H3D559 as seed ortholog is 100%.

Group of orthologs #924. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 T.nigroviridis:590

F7A693              	100.00%		H3CAS7              	100.00%
Bootstrap support for F7A693 as seed ortholog is 100%.
Bootstrap support for H3CAS7 as seed ortholog is 100%.

Group of orthologs #925. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:589

F6YIL9              	100.00%		Q4S684              	100.00%
                    	       		H3CIL7              	42.90%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for Q4S684 as seed ortholog is 100%.

Group of orthologs #926. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:589

Q5QQ55              	100.00%		H3D149              	100.00%
                    	       		H3D202              	24.26%
Bootstrap support for Q5QQ55 as seed ortholog is 100%.
Bootstrap support for H3D149 as seed ortholog is 100%.

Group of orthologs #927. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:589

F7ABR6              	100.00%		H3BZB4              	100.00%
Bootstrap support for F7ABR6 as seed ortholog is 97%.
Bootstrap support for H3BZB4 as seed ortholog is 100%.

Group of orthologs #928. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:535

F6UMX9              	100.00%		H3CRT2              	100.00%
Bootstrap support for F6UMX9 as seed ortholog is 100%.
Bootstrap support for H3CRT2 as seed ortholog is 100%.

Group of orthologs #929. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:589

H2XM91              	100.00%		H3CA93              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for H3CA93 as seed ortholog is 100%.

Group of orthologs #930. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:589

F6Y7P7              	100.00%		H3CXP0              	100.00%
Bootstrap support for F6Y7P7 as seed ortholog is 100%.
Bootstrap support for H3CXP0 as seed ortholog is 100%.

Group of orthologs #931. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:263

F6S8U4              	100.00%		Q4RR92              	100.00%
Bootstrap support for F6S8U4 as seed ortholog is 100%.
Bootstrap support for Q4RR92 as seed ortholog is 100%.

Group of orthologs #932. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:317

F7AVB6              	100.00%		H3DE66              	100.00%
Bootstrap support for F7AVB6 as seed ortholog is 100%.
Bootstrap support for H3DE66 as seed ortholog is 100%.

Group of orthologs #933. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 T.nigroviridis:589

H2XVM3              	100.00%		H3CX06              	100.00%
Bootstrap support for H2XVM3 as seed ortholog is 100%.
Bootstrap support for H3CX06 as seed ortholog is 100%.

Group of orthologs #934. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 T.nigroviridis:588

F6W141              	100.00%		H3CC41              	100.00%
                    	       		H3D5K8              	27.99%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for H3CC41 as seed ortholog is 100%.

Group of orthologs #935. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 T.nigroviridis:452

F7B221              	100.00%		H3CVP6              	100.00%
                    	       		H3CFP8              	69.68%
Bootstrap support for F7B221 as seed ortholog is 100%.
Bootstrap support for H3CVP6 as seed ortholog is 100%.

Group of orthologs #936. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 T.nigroviridis:588

F6TGV4              	100.00%		H3DN48              	100.00%
Bootstrap support for F6TGV4 as seed ortholog is 100%.
Bootstrap support for H3DN48 as seed ortholog is 100%.

Group of orthologs #937. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:545

F7B5K2              	100.00%		H3CBX8              	100.00%
                    	       		H3D4B5              	26.72%
Bootstrap support for F7B5K2 as seed ortholog is 100%.
Bootstrap support for H3CBX8 as seed ortholog is 100%.

Group of orthologs #938. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 T.nigroviridis:587

H2XVM0              	100.00%		H3D1A8              	100.00%
                    	       		H3DLY8              	15.08%
Bootstrap support for H2XVM0 as seed ortholog is 100%.
Bootstrap support for H3D1A8 as seed ortholog is 100%.

Group of orthologs #939. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 T.nigroviridis:587

F6YW68              	100.00%		H3CTE9              	100.00%
Bootstrap support for F6YW68 as seed ortholog is 100%.
Bootstrap support for H3CTE9 as seed ortholog is 100%.

Group of orthologs #940. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 T.nigroviridis:326

F7BEA7              	100.00%		H3CV30              	100.00%
Bootstrap support for F7BEA7 as seed ortholog is 100%.
Bootstrap support for H3CV30 as seed ortholog is 100%.

Group of orthologs #941. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 T.nigroviridis:408

F6XLX0              	100.00%		H3DJ05              	100.00%
Bootstrap support for F6XLX0 as seed ortholog is 100%.
Bootstrap support for H3DJ05 as seed ortholog is 100%.

Group of orthologs #942. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 T.nigroviridis:587

H2XNA5              	100.00%		H3DJV4              	100.00%
Bootstrap support for H2XNA5 as seed ortholog is 100%.
Bootstrap support for H3DJV4 as seed ortholog is 100%.

Group of orthologs #943. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:30

F6W833              	100.00%		H3CTQ3              	100.00%
L7N0R6              	51.82%		H3CZF8              	35.04%
H2Y1N3              	22.59%		
F6XCJ9              	20.85%		
F6W7L1              	20.38%		
Bootstrap support for F6W833 as seed ortholog is 69%.
Alternative seed ortholog is F6VSX4 (25 bits away from this cluster)
Bootstrap support for H3CTQ3 as seed ortholog is 73%.
Alternative seed ortholog is H3DH22 (30 bits away from this cluster)

Group of orthologs #944. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 T.nigroviridis:586

F6S4D4              	100.00%		H3DHL9              	100.00%
Bootstrap support for F6S4D4 as seed ortholog is 100%.
Bootstrap support for H3DHL9 as seed ortholog is 100%.

Group of orthologs #945. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 T.nigroviridis:519

F7AVN5              	100.00%		H3DBQ5              	100.00%
                    	       		H3CBT0              	28.57%
                    	       		H3DNG9              	20.00%
Bootstrap support for F7AVN5 as seed ortholog is 100%.
Bootstrap support for H3DBQ5 as seed ortholog is 100%.

Group of orthologs #946. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 T.nigroviridis:585

F6TZ29              	100.00%		H3DBF4              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for H3DBF4 as seed ortholog is 100%.

Group of orthologs #947. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 T.nigroviridis:585

F7B059              	100.00%		H3CSY6              	100.00%
Bootstrap support for F7B059 as seed ortholog is 100%.
Bootstrap support for H3CSY6 as seed ortholog is 100%.

Group of orthologs #948. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 T.nigroviridis:585

F6YV51              	100.00%		H3DPN3              	100.00%
Bootstrap support for F6YV51 as seed ortholog is 100%.
Bootstrap support for H3DPN3 as seed ortholog is 100%.

Group of orthologs #949. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:584

F6USH9              	100.00%		H3D3A4              	100.00%
                    	       		H3DKS6              	62.36%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for H3D3A4 as seed ortholog is 100%.

Group of orthologs #950. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:68

H2XYU1              	100.00%		H3C2I2              	100.00%
                    	       		H3DLE7              	5.43%
Bootstrap support for H2XYU1 as seed ortholog is 100%.
Bootstrap support for H3C2I2 as seed ortholog is 32%.
Alternative seed ortholog is H3CFD6 (68 bits away from this cluster)

Group of orthologs #951. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:584

F6R1A2              	100.00%		H3CAL9              	100.00%
Bootstrap support for F6R1A2 as seed ortholog is 100%.
Bootstrap support for H3CAL9 as seed ortholog is 100%.

Group of orthologs #952. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:584

F7BHR3              	100.00%		H3BY47              	100.00%
Bootstrap support for F7BHR3 as seed ortholog is 100%.
Bootstrap support for H3BY47 as seed ortholog is 100%.

Group of orthologs #953. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:584

F6ZHS2              	100.00%		H3D2P7              	100.00%
Bootstrap support for F6ZHS2 as seed ortholog is 100%.
Bootstrap support for H3D2P7 as seed ortholog is 100%.

Group of orthologs #954. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 T.nigroviridis:584

H2XKW2              	100.00%		H3DNN0              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for H3DNN0 as seed ortholog is 100%.

Group of orthologs #955. Best score 583 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 T.nigroviridis:583

F6TSN4              	100.00%		H3DN06              	100.00%
                    	       		H3DB80              	31.86%
                    	       		H3C5H4              	30.52%
Bootstrap support for F6TSN4 as seed ortholog is 100%.
Bootstrap support for H3DN06 as seed ortholog is 100%.

Group of orthologs #956. Best score 583 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 T.nigroviridis:583

F7AER5              	100.00%		H3DED3              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for H3DED3 as seed ortholog is 100%.

Group of orthologs #957. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:582

F6XFJ7              	100.00%		H3CGJ2              	100.00%
                    	       		H3C0U9              	22.74%
                    	       		H3CXI4              	22.12%
Bootstrap support for F6XFJ7 as seed ortholog is 100%.
Bootstrap support for H3CGJ2 as seed ortholog is 100%.

Group of orthologs #958. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:582

F6T636              	100.00%		H3DPT7              	100.00%
                    	       		H3C845              	23.05%
                    	       		H3DHD9              	13.43%
Bootstrap support for F6T636 as seed ortholog is 100%.
Bootstrap support for H3DPT7 as seed ortholog is 100%.

Group of orthologs #959. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:200

F6ZFK4              	100.00%		H3C664              	100.00%
H2XJH1              	8.83%		
Bootstrap support for F6ZFK4 as seed ortholog is 100%.
Bootstrap support for H3C664 as seed ortholog is 99%.

Group of orthologs #960. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:582

F6YYY1              	100.00%		H3BY17              	100.00%
Bootstrap support for F6YYY1 as seed ortholog is 100%.
Bootstrap support for H3BY17 as seed ortholog is 100%.

Group of orthologs #961. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:582

F6WAD4              	100.00%		H3CKM7              	100.00%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for H3CKM7 as seed ortholog is 100%.

Group of orthologs #962. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:157

F6ZIP1              	100.00%		H3CHR9              	100.00%
Bootstrap support for F6ZIP1 as seed ortholog is 100%.
Bootstrap support for H3CHR9 as seed ortholog is 99%.

Group of orthologs #963. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 T.nigroviridis:582

H2XZ65              	100.00%		Q4RKX4              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for Q4RKX4 as seed ortholog is 100%.

Group of orthologs #964. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:68

F7AW67              	100.00%		H3D2I5              	100.00%
                    	       		Q4RX95              	100.00%
                    	       		H3D005              	75.21%
                    	       		H3DDM6              	32.03%
Bootstrap support for F7AW67 as seed ortholog is 100%.
Bootstrap support for H3D2I5 as seed ortholog is 99%.
Bootstrap support for Q4RX95 as seed ortholog is 99%.

Group of orthologs #965. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 T.nigroviridis:581

F6PWP3              	100.00%		H3CRI2              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for H3CRI2 as seed ortholog is 100%.

Group of orthologs #966. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:254

F6YJQ7              	100.00%		H3CNB8              	100.00%
Bootstrap support for F6YJQ7 as seed ortholog is 100%.
Bootstrap support for H3CNB8 as seed ortholog is 100%.

Group of orthologs #967. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 T.nigroviridis:581

F6U441              	100.00%		H3D719              	100.00%
Bootstrap support for F6U441 as seed ortholog is 100%.
Bootstrap support for H3D719 as seed ortholog is 100%.

Group of orthologs #968. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 T.nigroviridis:56

F6UJI9              	100.00%		H3CGK1              	100.00%
Bootstrap support for F6UJI9 as seed ortholog is 100%.
Bootstrap support for H3CGK1 as seed ortholog is 91%.

Group of orthologs #969. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 T.nigroviridis:580

F6QY94              	100.00%		H3DGC5              	100.00%
Bootstrap support for F6QY94 as seed ortholog is 100%.
Bootstrap support for H3DGC5 as seed ortholog is 100%.

Group of orthologs #970. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 T.nigroviridis:535

F7BML6              	100.00%		H3BWS9              	100.00%
Bootstrap support for F7BML6 as seed ortholog is 100%.
Bootstrap support for H3BWS9 as seed ortholog is 100%.

Group of orthologs #971. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 T.nigroviridis:131

F7AU99              	100.00%		H3C4X0              	100.00%
Bootstrap support for F7AU99 as seed ortholog is 100%.
Bootstrap support for H3C4X0 as seed ortholog is 99%.

Group of orthologs #972. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 T.nigroviridis:578

F6UK15              	100.00%		H3DLN1              	100.00%
                    	       		H3DID2              	26.42%
                    	       		H3DNK9              	12.40%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for H3DLN1 as seed ortholog is 100%.

Group of orthologs #973. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 T.nigroviridis:510

F6ZAH0              	100.00%		H3CQD5              	100.00%
Bootstrap support for F6ZAH0 as seed ortholog is 100%.
Bootstrap support for H3CQD5 as seed ortholog is 100%.

Group of orthologs #974. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 T.nigroviridis:577

F6UAX7              	100.00%		H3D110              	100.00%
                    	       		H3CRP7              	33.14%
Bootstrap support for F6UAX7 as seed ortholog is 100%.
Bootstrap support for H3D110 as seed ortholog is 100%.

Group of orthologs #975. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 T.nigroviridis:577

F6QZI8              	100.00%		H3CES5              	100.00%
Bootstrap support for F6QZI8 as seed ortholog is 100%.
Bootstrap support for H3CES5 as seed ortholog is 100%.

Group of orthologs #976. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:383

F7BHM4              	100.00%		H3D8F9              	100.00%
Bootstrap support for F7BHM4 as seed ortholog is 100%.
Bootstrap support for H3D8F9 as seed ortholog is 100%.

Group of orthologs #977. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 T.nigroviridis:484

F6TLE7              	100.00%		H3D529              	100.00%
                    	       		H3D7S1              	11.94%
Bootstrap support for F6TLE7 as seed ortholog is 100%.
Bootstrap support for H3D529 as seed ortholog is 100%.

Group of orthologs #978. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 T.nigroviridis:576

F7AFK4              	100.00%		Q4SNL8              	100.00%
                    	       		H3C1Y2              	27.91%
Bootstrap support for F7AFK4 as seed ortholog is 100%.
Bootstrap support for Q4SNL8 as seed ortholog is 100%.

Group of orthologs #979. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 T.nigroviridis:576

F6ZGT0              	100.00%		H3C3H4              	100.00%
Bootstrap support for F6ZGT0 as seed ortholog is 100%.
Bootstrap support for H3C3H4 as seed ortholog is 100%.

Group of orthologs #980. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 T.nigroviridis:576

F6YZ22              	100.00%		H3C9W1              	100.00%
Bootstrap support for F6YZ22 as seed ortholog is 100%.
Bootstrap support for H3C9W1 as seed ortholog is 100%.

Group of orthologs #981. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 T.nigroviridis:576

F6SAH8              	100.00%		H3D7P7              	100.00%
Bootstrap support for F6SAH8 as seed ortholog is 100%.
Bootstrap support for H3D7P7 as seed ortholog is 100%.

Group of orthologs #982. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 T.nigroviridis:575

F6YN13              	100.00%		H3D7I3              	100.00%
                    	       		H3CVS7              	14.94%
Bootstrap support for F6YN13 as seed ortholog is 100%.
Bootstrap support for H3D7I3 as seed ortholog is 100%.

Group of orthologs #983. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 T.nigroviridis:575

H2XSN2              	100.00%		H3CDX7              	100.00%
Bootstrap support for H2XSN2 as seed ortholog is 100%.
Bootstrap support for H3CDX7 as seed ortholog is 100%.

Group of orthologs #984. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 T.nigroviridis:96

F7APB5              	100.00%		Q4RJR9              	100.00%
Bootstrap support for F7APB5 as seed ortholog is 100%.
Bootstrap support for Q4RJR9 as seed ortholog is 99%.

Group of orthologs #985. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 T.nigroviridis:574

F6QK56              	100.00%		H3CMP3              	100.00%
Bootstrap support for F6QK56 as seed ortholog is 100%.
Bootstrap support for H3CMP3 as seed ortholog is 100%.

Group of orthologs #986. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 T.nigroviridis:574

F6W0L1              	100.00%		H3DIJ7              	100.00%
Bootstrap support for F6W0L1 as seed ortholog is 100%.
Bootstrap support for H3DIJ7 as seed ortholog is 100%.

Group of orthologs #987. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 T.nigroviridis:574

F6YJE0              	100.00%		H3DPP8              	100.00%
Bootstrap support for F6YJE0 as seed ortholog is 100%.
Bootstrap support for H3DPP8 as seed ortholog is 100%.

Group of orthologs #988. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 T.nigroviridis:573

F6SHN0              	100.00%		H3D7E1              	100.00%
F6TSK2              	36.46%		
Bootstrap support for F6SHN0 as seed ortholog is 100%.
Bootstrap support for H3D7E1 as seed ortholog is 100%.

Group of orthologs #989. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 T.nigroviridis:573

F6Z7L9              	100.00%		H3DQ20              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for H3DQ20 as seed ortholog is 100%.

Group of orthologs #990. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 T.nigroviridis:573

H2Y1W6              	100.00%		H3CUG4              	100.00%
Bootstrap support for H2Y1W6 as seed ortholog is 100%.
Bootstrap support for H3CUG4 as seed ortholog is 100%.

Group of orthologs #991. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 T.nigroviridis:573

H2Y1G5              	100.00%		H3D9M3              	100.00%
Bootstrap support for H2Y1G5 as seed ortholog is 100%.
Bootstrap support for H3D9M3 as seed ortholog is 100%.

Group of orthologs #992. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 T.nigroviridis:572

F6U2V6              	100.00%		H3BXD6              	100.00%
Bootstrap support for F6U2V6 as seed ortholog is 100%.
Bootstrap support for H3BXD6 as seed ortholog is 100%.

Group of orthologs #993. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 T.nigroviridis:256

F7BA18              	100.00%		H3CL83              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for H3CL83 as seed ortholog is 99%.

Group of orthologs #994. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 T.nigroviridis:572

H2XPV7              	100.00%		H3CCF2              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for H3CCF2 as seed ortholog is 100%.

Group of orthologs #995. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 T.nigroviridis:458

H2XW76              	100.00%		H3D2H4              	100.00%
Bootstrap support for H2XW76 as seed ortholog is 100%.
Bootstrap support for H3D2H4 as seed ortholog is 100%.

Group of orthologs #996. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 T.nigroviridis:571

Q1RL44              	100.00%		H3DML4              	100.00%
                    	       		H3D1S8              	8.97%
Bootstrap support for Q1RL44 as seed ortholog is 100%.
Bootstrap support for H3DML4 as seed ortholog is 100%.

Group of orthologs #997. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 T.nigroviridis:571

F6PPP3              	100.00%		H3CGB8              	100.00%
Bootstrap support for F6PPP3 as seed ortholog is 100%.
Bootstrap support for H3CGB8 as seed ortholog is 100%.

Group of orthologs #998. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 T.nigroviridis:571

F6WRF3              	100.00%		H3CQJ5              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for H3CQJ5 as seed ortholog is 100%.

Group of orthologs #999. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 T.nigroviridis:153

F7B991              	100.00%		H3D913              	100.00%
Bootstrap support for F7B991 as seed ortholog is 100%.
Bootstrap support for H3D913 as seed ortholog is 100%.

Group of orthologs #1000. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 T.nigroviridis:571

F6ZW39              	100.00%		H3DIA6              	100.00%
Bootstrap support for F6ZW39 as seed ortholog is 100%.
Bootstrap support for H3DIA6 as seed ortholog is 100%.

Group of orthologs #1001. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 T.nigroviridis:473

F6W122              	100.00%		H3CSX3              	100.00%
                    	       		H3BVN9              	30.06%
                    	       		H3D170              	25.62%
Bootstrap support for F6W122 as seed ortholog is 100%.
Bootstrap support for H3CSX3 as seed ortholog is 100%.

Group of orthologs #1002. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 T.nigroviridis:570

F7B0I1              	100.00%		H3D0R3              	100.00%
                    	       		H3CKM6              	74.90%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for H3D0R3 as seed ortholog is 100%.

Group of orthologs #1003. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 T.nigroviridis:168

F6XAQ8              	100.00%		H3D0C7              	100.00%
Bootstrap support for F6XAQ8 as seed ortholog is 100%.
Bootstrap support for H3D0C7 as seed ortholog is 99%.

Group of orthologs #1004. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 T.nigroviridis:472

F6Y7R5              	100.00%		H3DRG5              	100.00%
Bootstrap support for F6Y7R5 as seed ortholog is 100%.
Bootstrap support for H3DRG5 as seed ortholog is 100%.

Group of orthologs #1005. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:342

F6QBL6              	100.00%		H3CRB1              	100.00%
                    	       		H3C0I8              	9.79%
                    	       		H3CN97              	8.36%
Bootstrap support for F6QBL6 as seed ortholog is 83%.
Bootstrap support for H3CRB1 as seed ortholog is 100%.

Group of orthologs #1006. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 T.nigroviridis:569

H2XT92              	100.00%		H3CRD6              	100.00%
                    	       		H3CGX7              	35.96%
Bootstrap support for H2XT92 as seed ortholog is 100%.
Bootstrap support for H3CRD6 as seed ortholog is 100%.

Group of orthologs #1007. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 T.nigroviridis:35

F6VNH8              	100.00%		H3CAH7              	100.00%
Bootstrap support for F6VNH8 as seed ortholog is 100%.
Bootstrap support for H3CAH7 as seed ortholog is 69%.
Alternative seed ortholog is H3D759 (35 bits away from this cluster)

Group of orthologs #1008. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 T.nigroviridis:569

F6YQR4              	100.00%		H3DCH0              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for H3DCH0 as seed ortholog is 100%.

Group of orthologs #1009. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:568

F6RXC5              	100.00%		H3CX26              	100.00%
                    	       		H3CLR6              	16.20%
                    	       		H3CQA1              	5.36%
Bootstrap support for F6RXC5 as seed ortholog is 100%.
Bootstrap support for H3CX26 as seed ortholog is 100%.

Group of orthologs #1010. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:65

F6VJS2              	100.00%		H3DAD9              	100.00%
                    	       		H3DIA2              	9.08%
Bootstrap support for F6VJS2 as seed ortholog is 100%.
Bootstrap support for H3DAD9 as seed ortholog is 87%.

Group of orthologs #1011. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:273

F6ZL94              	100.00%		Q4RR78              	100.00%
                    	       		H3C5I6              	8.38%
Bootstrap support for F6ZL94 as seed ortholog is 100%.
Bootstrap support for Q4RR78 as seed ortholog is 100%.

Group of orthologs #1012. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:568

F6SDE2              	100.00%		H3CHM8              	100.00%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for H3CHM8 as seed ortholog is 100%.

Group of orthologs #1013. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:568

F6YWB6              	100.00%		H3CDV3              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for H3CDV3 as seed ortholog is 100%.

Group of orthologs #1014. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:568

F7A9V2              	100.00%		H3CH45              	100.00%
Bootstrap support for F7A9V2 as seed ortholog is 100%.
Bootstrap support for H3CH45 as seed ortholog is 100%.

Group of orthologs #1015. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 T.nigroviridis:372

F7AYN4              	100.00%		H3CVZ4              	100.00%
Bootstrap support for F7AYN4 as seed ortholog is 100%.
Bootstrap support for H3CVZ4 as seed ortholog is 100%.

Group of orthologs #1016. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:568

F6WWH2              	100.00%		H3DPA7              	100.00%
Bootstrap support for F6WWH2 as seed ortholog is 100%.
Bootstrap support for H3DPA7 as seed ortholog is 100%.

Group of orthologs #1017. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 T.nigroviridis:568

H2XJK0              	100.00%		H3DI97              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for H3DI97 as seed ortholog is 100%.

Group of orthologs #1018. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:68

F6X9M4              	100.00%		H3D885              	100.00%
                    	       		H3DAX5              	37.46%
                    	       		H3D5M5              	15.58%
                    	       		H3DNN5              	12.14%
Bootstrap support for F6X9M4 as seed ortholog is 94%.
Bootstrap support for H3D885 as seed ortholog is 93%.

Group of orthologs #1019. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 T.nigroviridis:345

F7ADR7              	100.00%		H3CSC2              	100.00%
Bootstrap support for F7ADR7 as seed ortholog is 100%.
Bootstrap support for H3CSC2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 T.nigroviridis:567

F6ZA35              	100.00%		H3D4V6              	100.00%
Bootstrap support for F6ZA35 as seed ortholog is 100%.
Bootstrap support for H3D4V6 as seed ortholog is 100%.

Group of orthologs #1021. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 T.nigroviridis:435

F6RZA6              	100.00%		H3CX64              	100.00%
Bootstrap support for F6RZA6 as seed ortholog is 100%.
Bootstrap support for H3CX64 as seed ortholog is 100%.

Group of orthologs #1022. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 T.nigroviridis:566

H2XRH2              	100.00%		H3D3W3              	100.00%
Bootstrap support for H2XRH2 as seed ortholog is 100%.
Bootstrap support for H3D3W3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:110

F6YLJ0              	100.00%		H3BYH7              	100.00%
F6VIM5              	5.57%		
Bootstrap support for F6YLJ0 as seed ortholog is 79%.
Bootstrap support for H3BYH7 as seed ortholog is 99%.

Group of orthologs #1024. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:565

H2XNI1              	100.00%		H3CP26              	100.00%
Bootstrap support for H2XNI1 as seed ortholog is 100%.
Bootstrap support for H3CP26 as seed ortholog is 100%.

Group of orthologs #1025. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:141

F7A6E1              	100.00%		H3CF15              	100.00%
                    	       		H3CX71              	21.48%
                    	       		H3DLJ5              	19.11%
                    	       		H3CUC2              	17.02%
                    	       		H3CXE3              	16.60%
Bootstrap support for F7A6E1 as seed ortholog is 51%.
Alternative seed ortholog is F7AQC2 (18 bits away from this cluster)
Bootstrap support for H3CF15 as seed ortholog is 99%.

Group of orthologs #1026. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 T.nigroviridis:564

F6UHR3              	100.00%		H3C5G3              	100.00%
Bootstrap support for F6UHR3 as seed ortholog is 100%.
Bootstrap support for H3C5G3 as seed ortholog is 100%.

Group of orthologs #1027. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 T.nigroviridis:564

F7A1R5              	100.00%		H3CP06              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for H3CP06 as seed ortholog is 100%.

Group of orthologs #1028. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 T.nigroviridis:389

F6UIG7              	100.00%		H3D925              	100.00%
Bootstrap support for F6UIG7 as seed ortholog is 100%.
Bootstrap support for H3D925 as seed ortholog is 100%.

Group of orthologs #1029. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:114

H2XP37              	100.00%		H3CHV7              	100.00%
Bootstrap support for H2XP37 as seed ortholog is 99%.
Bootstrap support for H3CHV7 as seed ortholog is 99%.

Group of orthologs #1030. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 T.nigroviridis:563

H2XW46              	100.00%		H3D7J0              	100.00%
H2XPW9              	7.39%		
Bootstrap support for H2XW46 as seed ortholog is 100%.
Bootstrap support for H3D7J0 as seed ortholog is 100%.

Group of orthologs #1031. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 T.nigroviridis:563

F6ZY44              	100.00%		H3DPY4              	100.00%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for H3DPY4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:241

F6ZMT5              	100.00%		H3CCC1              	100.00%
                    	       		H3CHD0              	28.20%
                    	       		H3CYS9              	20.63%
Bootstrap support for F6ZMT5 as seed ortholog is 100%.
Bootstrap support for H3CCC1 as seed ortholog is 100%.

Group of orthologs #1033. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 T.nigroviridis:562

F6WJQ9              	100.00%		H3CHP8              	100.00%
Bootstrap support for F6WJQ9 as seed ortholog is 100%.
Bootstrap support for H3CHP8 as seed ortholog is 100%.

Group of orthologs #1034. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 T.nigroviridis:562

F6PYH8              	100.00%		H3DFD3              	100.00%
Bootstrap support for F6PYH8 as seed ortholog is 100%.
Bootstrap support for H3DFD3 as seed ortholog is 100%.

Group of orthologs #1035. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:562

F7BH30              	100.00%		H3CGT0              	100.00%
Bootstrap support for F7BH30 as seed ortholog is 100%.
Bootstrap support for H3CGT0 as seed ortholog is 100%.

Group of orthologs #1036. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:332

F6R4H2              	100.00%		Q4RH34              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 100%.
Bootstrap support for Q4RH34 as seed ortholog is 100%.

Group of orthologs #1037. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 T.nigroviridis:561

H2XKN0              	100.00%		H3CPG6              	100.00%
Bootstrap support for H2XKN0 as seed ortholog is 100%.
Bootstrap support for H3CPG6 as seed ortholog is 100%.

Group of orthologs #1038. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 T.nigroviridis:561

H2XYB4              	100.00%		H3CLD1              	100.00%
Bootstrap support for H2XYB4 as seed ortholog is 100%.
Bootstrap support for H3CLD1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 T.nigroviridis:561

F7B1U4              	100.00%		H3DP92              	100.00%
Bootstrap support for F7B1U4 as seed ortholog is 100%.
Bootstrap support for H3DP92 as seed ortholog is 100%.

Group of orthologs #1040. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 T.nigroviridis:560

F6RFB0              	100.00%		H3CSV5              	100.00%
                    	       		H3CDB9              	28.92%
                    	       		H3DLK7              	8.80%
Bootstrap support for F6RFB0 as seed ortholog is 100%.
Bootstrap support for H3CSV5 as seed ortholog is 100%.

Group of orthologs #1041. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 T.nigroviridis:91

F6ZP71              	100.00%		H3CCC9              	100.00%
                    	       		H3DCX0              	46.07%
                    	       		H3D982              	6.74%
Bootstrap support for F6ZP71 as seed ortholog is 100%.
Bootstrap support for H3CCC9 as seed ortholog is 99%.

Group of orthologs #1042. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:13

Q8WSS1              	100.00%		H3DAV0              	100.00%
Bootstrap support for Q8WSS1 as seed ortholog is 99%.
Bootstrap support for H3DAV0 as seed ortholog is 65%.
Alternative seed ortholog is H3DCF2 (13 bits away from this cluster)

Group of orthologs #1043. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:183

F6YJ55              	100.00%		H3CXP4              	100.00%
F6YJ69              	36.28%		H3D648              	33.41%
                    	       		H3CQW1              	30.31%
                    	       		H3DK93              	24.12%
Bootstrap support for F6YJ55 as seed ortholog is 100%.
Bootstrap support for H3CXP4 as seed ortholog is 99%.

Group of orthologs #1044. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:304

Q4H3K6              	100.00%		H3C429              	100.00%
F6QQF5              	81.70%		H3CQB4              	47.77%
                    	       		H3DND6              	41.05%
                    	       		H3D7B8              	39.07%
Bootstrap support for Q4H3K6 as seed ortholog is 100%.
Bootstrap support for H3C429 as seed ortholog is 100%.

Group of orthologs #1045. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:559

F7B0A7              	100.00%		H3C5X2              	100.00%
                    	       		Q4S204              	42.25%
Bootstrap support for F7B0A7 as seed ortholog is 100%.
Bootstrap support for H3C5X2 as seed ortholog is 100%.

Group of orthologs #1046. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 T.nigroviridis:275

F6XGL3              	100.00%		H3BW05              	100.00%
Bootstrap support for F6XGL3 as seed ortholog is 100%.
Bootstrap support for H3BW05 as seed ortholog is 100%.

Group of orthologs #1047. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 T.nigroviridis:478

F6V779              	100.00%		H3CJX5              	100.00%
Bootstrap support for F6V779 as seed ortholog is 100%.
Bootstrap support for H3CJX5 as seed ortholog is 100%.

Group of orthologs #1048. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 T.nigroviridis:287

F6U1L2              	100.00%		H3D7T7              	100.00%
Bootstrap support for F6U1L2 as seed ortholog is 100%.
Bootstrap support for H3D7T7 as seed ortholog is 100%.

Group of orthologs #1049. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 T.nigroviridis:271

F6W4K8              	100.00%		H3D433              	100.00%
                    	       		H3CH90              	83.59%
                    	       		H3BY46              	59.45%
                    	       		H3D3R5              	56.64%
                    	       		H3CIB4              	10.86%
                    	       		H3CQS2              	7.48%
Bootstrap support for F6W4K8 as seed ortholog is 100%.
Bootstrap support for H3D433 as seed ortholog is 99%.

Group of orthologs #1050. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 T.nigroviridis:558

H2Y2D6              	100.00%		H3C9D0              	100.00%
                    	       		H3D9N3              	13.96%
                    	       		H3BYG5              	5.22%
Bootstrap support for H2Y2D6 as seed ortholog is 100%.
Bootstrap support for H3C9D0 as seed ortholog is 100%.

Group of orthologs #1051. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:380

F6SDQ3              	100.00%		H3CXV2              	100.00%
Bootstrap support for F6SDQ3 as seed ortholog is 100%.
Bootstrap support for H3CXV2 as seed ortholog is 100%.

Group of orthologs #1052. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 T.nigroviridis:557

F6REB5              	100.00%		H3DC18              	100.00%
                    	       		H3CQ54              	40.12%
Bootstrap support for F6REB5 as seed ortholog is 100%.
Bootstrap support for H3DC18 as seed ortholog is 100%.

Group of orthologs #1053. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:131

H2XQ28              	100.00%		H3C717              	100.00%
                    	       		H3CQH2              	11.66%
Bootstrap support for H2XQ28 as seed ortholog is 99%.
Bootstrap support for H3C717 as seed ortholog is 99%.

Group of orthologs #1054. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:475

F6UHI7              	100.00%		H3CS11              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for H3CS11 as seed ortholog is 100%.

Group of orthologs #1055. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 T.nigroviridis:557

F6YFB9              	100.00%		H3CPT9              	100.00%
Bootstrap support for F6YFB9 as seed ortholog is 100%.
Bootstrap support for H3CPT9 as seed ortholog is 100%.

Group of orthologs #1056. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:557

F6VL61              	100.00%		H3DLD1              	100.00%
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for H3DLD1 as seed ortholog is 100%.

Group of orthologs #1057. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 T.nigroviridis:557

H2XR08              	100.00%		H3CX87              	100.00%
Bootstrap support for H2XR08 as seed ortholog is 100%.
Bootstrap support for H3CX87 as seed ortholog is 100%.

Group of orthologs #1058. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 T.nigroviridis:556

F6VVE9              	100.00%		H3CAF6              	100.00%
Bootstrap support for F6VVE9 as seed ortholog is 100%.
Bootstrap support for H3CAF6 as seed ortholog is 100%.

Group of orthologs #1059. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:347

F6Z0V8              	100.00%		H3DDM5              	100.00%
Bootstrap support for F6Z0V8 as seed ortholog is 100%.
Bootstrap support for H3DDM5 as seed ortholog is 100%.

Group of orthologs #1060. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:58

F6Y1R8              	100.00%		H3BWJ1              	100.00%
                    	       		H3D5C7              	19.78%
                    	       		H3DBV7              	15.62%
Bootstrap support for F6Y1R8 as seed ortholog is 100%.
Bootstrap support for H3BWJ1 as seed ortholog is 86%.

Group of orthologs #1061. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:555

F6RMP9              	100.00%		H3D6L6              	100.00%
                    	       		H3DH64              	29.16%
                    	       		H3CRF4              	26.82%
Bootstrap support for F6RMP9 as seed ortholog is 100%.
Bootstrap support for H3D6L6 as seed ortholog is 100%.

Group of orthologs #1062. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:266

F6V934              	100.00%		H3DQ26              	100.00%
                    	       		H3CYT9              	28.87%
Bootstrap support for F6V934 as seed ortholog is 100%.
Bootstrap support for H3DQ26 as seed ortholog is 100%.

Group of orthologs #1063. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:555

F6ZA03              	100.00%		H3CFR3              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for H3CFR3 as seed ortholog is 100%.

Group of orthologs #1064. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:510

F6YBW7              	100.00%		H3CNR0              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for H3CNR0 as seed ortholog is 100%.

Group of orthologs #1065. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:555

F6YNT4              	100.00%		H3CWJ5              	100.00%
Bootstrap support for F6YNT4 as seed ortholog is 100%.
Bootstrap support for H3CWJ5 as seed ortholog is 100%.

Group of orthologs #1066. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:555

F7ALJ6              	100.00%		H3CQD7              	100.00%
Bootstrap support for F7ALJ6 as seed ortholog is 100%.
Bootstrap support for H3CQD7 as seed ortholog is 100%.

Group of orthologs #1067. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:555

F6TJS8              	100.00%		H3DKW8              	100.00%
Bootstrap support for F6TJS8 as seed ortholog is 100%.
Bootstrap support for H3DKW8 as seed ortholog is 100%.

Group of orthologs #1068. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 T.nigroviridis:555

F6SUS9              	100.00%		Q4SM08              	100.00%
Bootstrap support for F6SUS9 as seed ortholog is 100%.
Bootstrap support for Q4SM08 as seed ortholog is 100%.

Group of orthologs #1069. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 T.nigroviridis:554

F6UG35              	100.00%		H3D080              	100.00%
                    	       		H3DNL3              	37.75%
Bootstrap support for F6UG35 as seed ortholog is 100%.
Bootstrap support for H3D080 as seed ortholog is 100%.

Group of orthologs #1070. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:337

F6XTY4              	100.00%		Q4SXZ3              	100.00%
                    	       		H3D4E9              	15.22%
Bootstrap support for F6XTY4 as seed ortholog is 100%.
Bootstrap support for Q4SXZ3 as seed ortholog is 100%.

Group of orthologs #1071. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 T.nigroviridis:554

F7AJ78              	100.00%		H3CPZ4              	100.00%
Bootstrap support for F7AJ78 as seed ortholog is 100%.
Bootstrap support for H3CPZ4 as seed ortholog is 100%.

Group of orthologs #1072. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 T.nigroviridis:553

F7A912              	100.00%		H3CVV1              	100.00%
Bootstrap support for F7A912 as seed ortholog is 100%.
Bootstrap support for H3CVV1 as seed ortholog is 100%.

Group of orthologs #1073. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 T.nigroviridis:152

F7AD70              	100.00%		H3DLP5              	100.00%
Bootstrap support for F7AD70 as seed ortholog is 100%.
Bootstrap support for H3DLP5 as seed ortholog is 99%.

Group of orthologs #1074. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 T.nigroviridis:552

F7AWI9              	100.00%		H3DAA6              	100.00%
Bootstrap support for F7AWI9 as seed ortholog is 100%.
Bootstrap support for H3DAA6 as seed ortholog is 100%.

Group of orthologs #1075. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 T.nigroviridis:552

H2Y2Q0              	100.00%		H3D5T0              	100.00%
Bootstrap support for H2Y2Q0 as seed ortholog is 100%.
Bootstrap support for H3D5T0 as seed ortholog is 100%.

Group of orthologs #1076. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 T.nigroviridis:480

F6QRJ2              	100.00%		H3CP58              	100.00%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for H3CP58 as seed ortholog is 100%.

Group of orthologs #1077. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 T.nigroviridis:291

F6TUU8              	100.00%		H3DL97              	100.00%
Bootstrap support for F6TUU8 as seed ortholog is 100%.
Bootstrap support for H3DL97 as seed ortholog is 100%.

Group of orthologs #1078. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:224

H2XS38              	100.00%		H3BYD5              	100.00%
                    	       		H3CLF3              	10.45%
Bootstrap support for H2XS38 as seed ortholog is 99%.
Bootstrap support for H3BYD5 as seed ortholog is 99%.

Group of orthologs #1079. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 T.nigroviridis:360

F6PQ66              	100.00%		H3DJH3              	100.00%
                    	       		H3DM94              	13.27%
Bootstrap support for F6PQ66 as seed ortholog is 100%.
Bootstrap support for H3DJH3 as seed ortholog is 100%.

Group of orthologs #1080. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 T.nigroviridis:550

H2XVF8              	100.00%		H3CZG5              	100.00%
                    	       		H3CMV8              	12.68%
Bootstrap support for H2XVF8 as seed ortholog is 100%.
Bootstrap support for H3CZG5 as seed ortholog is 100%.

Group of orthologs #1081. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:184

F6W3N0              	100.00%		H3CAW8              	100.00%
Bootstrap support for F6W3N0 as seed ortholog is 72%.
Alternative seed ortholog is F6TEN3 (28 bits away from this cluster)
Bootstrap support for H3CAW8 as seed ortholog is 99%.

Group of orthologs #1082. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:52

F6TMJ9              	100.00%		H3CPM8              	100.00%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for H3CPM8 as seed ortholog is 95%.

Group of orthologs #1083. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:383

F6UEZ5              	100.00%		H3DQ14              	100.00%
Bootstrap support for F6UEZ5 as seed ortholog is 100%.
Bootstrap support for H3DQ14 as seed ortholog is 100%.

Group of orthologs #1084. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:195

F6ZK74              	100.00%		H3DBC1              	100.00%
Bootstrap support for F6ZK74 as seed ortholog is 100%.
Bootstrap support for H3DBC1 as seed ortholog is 99%.

Group of orthologs #1085. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 T.nigroviridis:550

F6YFG4              	100.00%		H3DQ25              	100.00%
Bootstrap support for F6YFG4 as seed ortholog is 100%.
Bootstrap support for H3DQ25 as seed ortholog is 100%.

Group of orthologs #1086. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:379

H2XX53              	100.00%		H3DCJ9              	100.00%
Bootstrap support for H2XX53 as seed ortholog is 100%.
Bootstrap support for H3DCJ9 as seed ortholog is 100%.

Group of orthologs #1087. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:549

H2XNC4              	100.00%		H3CMX8              	100.00%
H2XUW8              	58.25%		
H2XQV4              	52.69%		
Bootstrap support for H2XNC4 as seed ortholog is 99%.
Bootstrap support for H3CMX8 as seed ortholog is 100%.

Group of orthologs #1088. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 T.nigroviridis:549

H2XPJ9              	100.00%		H3CMD1              	100.00%
                    	       		H3D9C5              	24.17%
                    	       		H3D6P7              	18.61%
Bootstrap support for H2XPJ9 as seed ortholog is 100%.
Bootstrap support for H3CMD1 as seed ortholog is 100%.

Group of orthologs #1089. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 T.nigroviridis:549

F6PHE6              	100.00%		H3CHH1              	100.00%
Bootstrap support for F6PHE6 as seed ortholog is 100%.
Bootstrap support for H3CHH1 as seed ortholog is 100%.

Group of orthologs #1090. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 T.nigroviridis:236

F7AHK4              	100.00%		H3CVJ8              	100.00%
Bootstrap support for F7AHK4 as seed ortholog is 100%.
Bootstrap support for H3CVJ8 as seed ortholog is 99%.

Group of orthologs #1091. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 T.nigroviridis:196

H2XK85              	100.00%		H3CBT7              	100.00%
H2XLI5              	22.58%		
Bootstrap support for H2XK85 as seed ortholog is 100%.
Bootstrap support for H3CBT7 as seed ortholog is 100%.

Group of orthologs #1092. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:548

F6R5L0              	100.00%		H3CSB0              	100.00%
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for H3CSB0 as seed ortholog is 100%.

Group of orthologs #1093. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 T.nigroviridis:547

F6QLM7              	100.00%		H3CXM1              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for H3CXM1 as seed ortholog is 100%.

Group of orthologs #1094. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:92

F7AHM9              	100.00%		H3CQF9              	100.00%
Bootstrap support for F7AHM9 as seed ortholog is 98%.
Bootstrap support for H3CQF9 as seed ortholog is 97%.

Group of orthologs #1095. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 T.nigroviridis:547

F6QI37              	100.00%		Q4TBL7              	100.00%
Bootstrap support for F6QI37 as seed ortholog is 100%.
Bootstrap support for Q4TBL7 as seed ortholog is 100%.

Group of orthologs #1096. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 T.nigroviridis:547

H2XRG4              	100.00%		H3D3N5              	100.00%
Bootstrap support for H2XRG4 as seed ortholog is 100%.
Bootstrap support for H3D3N5 as seed ortholog is 100%.

Group of orthologs #1097. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:12

F6XL13              	100.00%		H3BZP5              	100.00%
F6SPL0              	55.18%		
Bootstrap support for F6XL13 as seed ortholog is 99%.
Bootstrap support for H3BZP5 as seed ortholog is 60%.
Alternative seed ortholog is H3D173 (12 bits away from this cluster)

Group of orthologs #1098. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 T.nigroviridis:546

F6SM47              	100.00%		H3CZZ5              	100.00%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for H3CZZ5 as seed ortholog is 100%.

Group of orthologs #1099. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 T.nigroviridis:546

H2XLP3              	100.00%		H3CVR6              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for H3CVR6 as seed ortholog is 100%.

Group of orthologs #1100. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:412

F6U7X2              	100.00%		H3BXX4              	100.00%
                    	       		H3DLW5              	14.54%
                    	       		H3DD95              	10.24%
Bootstrap support for F6U7X2 as seed ortholog is 100%.
Bootstrap support for H3BXX4 as seed ortholog is 100%.

Group of orthologs #1101. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:545

F6YPB8              	100.00%		H3CCJ9              	100.00%
                    	       		H3C0N7              	10.85%
                    	       		H3C6I0              	9.49%
Bootstrap support for F6YPB8 as seed ortholog is 99%.
Bootstrap support for H3CCJ9 as seed ortholog is 100%.

Group of orthologs #1102. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:436

F6W841              	100.00%		H3CP53              	100.00%
                    	       		H3D504              	10.60%
                    	       		H3BW34              	10.25%
Bootstrap support for F6W841 as seed ortholog is 100%.
Bootstrap support for H3CP53 as seed ortholog is 100%.

Group of orthologs #1103. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:271

F6WBI7              	100.00%		H3CIK1              	100.00%
F6WXA3              	44.92%		
Bootstrap support for F6WBI7 as seed ortholog is 100%.
Bootstrap support for H3CIK1 as seed ortholog is 100%.

Group of orthologs #1104. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:545

F6U1G1              	100.00%		H3D8K8              	100.00%
                    	       		H3CHM5              	10.90%
Bootstrap support for F6U1G1 as seed ortholog is 100%.
Bootstrap support for H3D8K8 as seed ortholog is 100%.

Group of orthologs #1105. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:545

F6R999              	100.00%		H3BZR2              	100.00%
Bootstrap support for F6R999 as seed ortholog is 100%.
Bootstrap support for H3BZR2 as seed ortholog is 100%.

Group of orthologs #1106. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:545

F6WYU9              	100.00%		H3CNE4              	100.00%
Bootstrap support for F6WYU9 as seed ortholog is 100%.
Bootstrap support for H3CNE4 as seed ortholog is 100%.

Group of orthologs #1107. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 T.nigroviridis:545

H2XP55              	100.00%		H3BVN0              	100.00%
Bootstrap support for H2XP55 as seed ortholog is 100%.
Bootstrap support for H3BVN0 as seed ortholog is 100%.

Group of orthologs #1108. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:115

F6TJL2              	100.00%		H3DPK2              	100.00%
Bootstrap support for F6TJL2 as seed ortholog is 99%.
Bootstrap support for H3DPK2 as seed ortholog is 99%.

Group of orthologs #1109. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 T.nigroviridis:430

F6RB18              	100.00%		H3BVJ7              	100.00%
Bootstrap support for F6RB18 as seed ortholog is 100%.
Bootstrap support for H3BVJ7 as seed ortholog is 100%.

Group of orthologs #1110. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 T.nigroviridis:544

F6S9F0              	100.00%		H3CLY9              	100.00%
Bootstrap support for F6S9F0 as seed ortholog is 100%.
Bootstrap support for H3CLY9 as seed ortholog is 100%.

Group of orthologs #1111. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 T.nigroviridis:544

F6YGJ1              	100.00%		H3D5F2              	100.00%
Bootstrap support for F6YGJ1 as seed ortholog is 100%.
Bootstrap support for H3D5F2 as seed ortholog is 100%.

Group of orthologs #1112. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 T.nigroviridis:344

F7BP11              	100.00%		H3CH94              	100.00%
Bootstrap support for F7BP11 as seed ortholog is 100%.
Bootstrap support for H3CH94 as seed ortholog is 100%.

Group of orthologs #1113. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 T.nigroviridis:542

F6UIA2              	100.00%		H3CTX1              	100.00%
Bootstrap support for F6UIA2 as seed ortholog is 100%.
Bootstrap support for H3CTX1 as seed ortholog is 100%.

Group of orthologs #1114. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:485

F6YK29              	100.00%		H3D0M9              	100.00%
Bootstrap support for F6YK29 as seed ortholog is 99%.
Bootstrap support for H3D0M9 as seed ortholog is 100%.

Group of orthologs #1115. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 T.nigroviridis:280

H2XUW1              	100.00%		H3CW70              	100.00%
                    	       		H3DJT8              	6.28%
Bootstrap support for H2XUW1 as seed ortholog is 100%.
Bootstrap support for H3CW70 as seed ortholog is 100%.

Group of orthologs #1116. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 T.nigroviridis:541

F6U2M6              	100.00%		H3CA62              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for H3CA62 as seed ortholog is 100%.

Group of orthologs #1117. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 T.nigroviridis:541

F6WN54              	100.00%		H3CK36              	100.00%
Bootstrap support for F6WN54 as seed ortholog is 100%.
Bootstrap support for H3CK36 as seed ortholog is 100%.

Group of orthologs #1118. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 T.nigroviridis:155

F6RBW8              	100.00%		H3D9F6              	100.00%
Bootstrap support for F6RBW8 as seed ortholog is 100%.
Bootstrap support for H3D9F6 as seed ortholog is 99%.

Group of orthologs #1119. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 T.nigroviridis:541

F6TIM2              	100.00%		H3D6G7              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for H3D6G7 as seed ortholog is 100%.

Group of orthologs #1120. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 T.nigroviridis:541

F6TMN3              	100.00%		H3D7J9              	100.00%
Bootstrap support for F6TMN3 as seed ortholog is 100%.
Bootstrap support for H3D7J9 as seed ortholog is 100%.

Group of orthologs #1121. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 T.nigroviridis:540

F6TQI0              	100.00%		H3DR21              	100.00%
F6TB46              	68.50%		
F6UUY2              	11.97%		
F6TQU2              	7.72%		
Bootstrap support for F6TQI0 as seed ortholog is 100%.
Bootstrap support for H3DR21 as seed ortholog is 100%.

Group of orthologs #1122. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:161

H2Y1T7              	100.00%		H3D8L0              	100.00%
                    	       		H3D2W3              	25.38%
Bootstrap support for H2Y1T7 as seed ortholog is 100%.
Bootstrap support for H3D8L0 as seed ortholog is 99%.

Group of orthologs #1123. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 T.nigroviridis:31

F6TAK8              	100.00%		H3C7X8              	100.00%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for H3C7X8 as seed ortholog is 88%.

Group of orthologs #1124. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:107

F6Y4T9              	100.00%		H3CD47              	100.00%
Bootstrap support for F6Y4T9 as seed ortholog is 51%.
Alternative seed ortholog is F6YGW9 (3 bits away from this cluster)
Bootstrap support for H3CD47 as seed ortholog is 98%.

Group of orthologs #1125. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 T.nigroviridis:539

F6TTI3              	100.00%		Q4SLR1              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 100%.
Bootstrap support for Q4SLR1 as seed ortholog is 100%.

Group of orthologs #1126. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 T.nigroviridis:539

F7B2Q7              	100.00%		H3D5P8              	100.00%
Bootstrap support for F7B2Q7 as seed ortholog is 100%.
Bootstrap support for H3D5P8 as seed ortholog is 100%.

Group of orthologs #1127. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 T.nigroviridis:538

F6U3Q1              	100.00%		Q4SBC3              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for Q4SBC3 as seed ortholog is 100%.

Group of orthologs #1128. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 T.nigroviridis:322

H2XS52              	100.00%		H3D4D7              	100.00%
Bootstrap support for H2XS52 as seed ortholog is 100%.
Bootstrap support for H3D4D7 as seed ortholog is 100%.

Group of orthologs #1129. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 T.nigroviridis:237

F6VYF2              	100.00%		H3CH74              	100.00%
                    	       		H3CAZ5              	21.24%
                    	       		H3CIC5              	17.57%
                    	       		H3CEU2              	12.54%
                    	       		H3DKN8              	10.09%
                    	       		H3CQ67              	8.32%
Bootstrap support for F6VYF2 as seed ortholog is 57%.
Alternative seed ortholog is F7ABT2 (1 bits away from this cluster)
Bootstrap support for H3CH74 as seed ortholog is 99%.

Group of orthologs #1130. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:247

F6WZV6              	100.00%		H3CRL0              	100.00%
                    	       		H3D330              	51.00%
                    	       		H3CQ03              	43.23%
                    	       		H3DCY4              	43.23%
Bootstrap support for F6WZV6 as seed ortholog is 99%.
Bootstrap support for H3CRL0 as seed ortholog is 100%.

Group of orthologs #1131. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:82

F6WQS9              	100.00%		H3DLV3              	100.00%
                    	       		H3D3B3              	15.62%
                    	       		H3D6I5              	14.71%
Bootstrap support for F6WQS9 as seed ortholog is 99%.
Bootstrap support for H3DLV3 as seed ortholog is 99%.

Group of orthologs #1132. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 T.nigroviridis:25

F6SSQ7              	100.00%		H3CNH4              	100.00%
                    	       		H3CEA1              	5.67%
Bootstrap support for F6SSQ7 as seed ortholog is 100%.
Bootstrap support for H3CNH4 as seed ortholog is 64%.
Alternative seed ortholog is H3D210 (25 bits away from this cluster)

Group of orthologs #1133. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 T.nigroviridis:211

F6WXC5              	100.00%		H3C6R6              	100.00%
Bootstrap support for F6WXC5 as seed ortholog is 100%.
Bootstrap support for H3C6R6 as seed ortholog is 100%.

Group of orthologs #1134. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 T.nigroviridis:537

F6TMR2              	100.00%		H3CKD7              	100.00%
Bootstrap support for F6TMR2 as seed ortholog is 100%.
Bootstrap support for H3CKD7 as seed ortholog is 100%.

Group of orthologs #1135. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 T.nigroviridis:537

F6YND1              	100.00%		H3CQC0              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for H3CQC0 as seed ortholog is 100%.

Group of orthologs #1136. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 T.nigroviridis:187

F6UVK0              	100.00%		H3DHP1              	100.00%
Bootstrap support for F6UVK0 as seed ortholog is 100%.
Bootstrap support for H3DHP1 as seed ortholog is 99%.

Group of orthologs #1137. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 T.nigroviridis:537

Q95YJ5              	100.00%		H3C3F0              	100.00%
Bootstrap support for Q95YJ5 as seed ortholog is 100%.
Bootstrap support for H3C3F0 as seed ortholog is 100%.

Group of orthologs #1138. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 T.nigroviridis:448

H2XQR7              	100.00%		H3D8P7              	100.00%
Bootstrap support for H2XQR7 as seed ortholog is 100%.
Bootstrap support for H3D8P7 as seed ortholog is 100%.

Group of orthologs #1139. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 T.nigroviridis:536

F6ZXB2              	100.00%		H3D349              	100.00%
Bootstrap support for F6ZXB2 as seed ortholog is 100%.
Bootstrap support for H3D349 as seed ortholog is 100%.

Group of orthologs #1140. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 T.nigroviridis:331

F6XT75              	100.00%		H3DJ71              	100.00%
Bootstrap support for F6XT75 as seed ortholog is 100%.
Bootstrap support for H3DJ71 as seed ortholog is 100%.

Group of orthologs #1141. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 T.nigroviridis:536

F6XDI5              	100.00%		H3DN72              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for H3DN72 as seed ortholog is 100%.

Group of orthologs #1142. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 T.nigroviridis:417

L7N0S3              	100.00%		H3CIA2              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 100%.
Bootstrap support for H3CIA2 as seed ortholog is 100%.

Group of orthologs #1143. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 T.nigroviridis:307

H2XS58              	100.00%		H3D3K3              	100.00%
                    	       		H3D1G1              	35.29%
                    	       		H3D0N4              	15.93%
                    	       		H3DLR6              	6.90%
Bootstrap support for H2XS58 as seed ortholog is 100%.
Bootstrap support for H3D3K3 as seed ortholog is 99%.

Group of orthologs #1144. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 T.nigroviridis:471

F7AAV2              	100.00%		H3CLU7              	100.00%
F6SDP7              	19.37%		H3DL92              	8.48%
Bootstrap support for F7AAV2 as seed ortholog is 100%.
Bootstrap support for H3CLU7 as seed ortholog is 100%.

Group of orthologs #1145. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:392

F6SGJ4              	100.00%		H3CYK0              	100.00%
Bootstrap support for F6SGJ4 as seed ortholog is 100%.
Bootstrap support for H3CYK0 as seed ortholog is 100%.

Group of orthologs #1146. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 T.nigroviridis:535

F6QR08              	100.00%		H3DMR7              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for H3DMR7 as seed ortholog is 100%.

Group of orthologs #1147. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 T.nigroviridis:535

F7BBV8              	100.00%		H3CVP4              	100.00%
Bootstrap support for F7BBV8 as seed ortholog is 100%.
Bootstrap support for H3CVP4 as seed ortholog is 100%.

Group of orthologs #1148. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:45

F6PWZ1              	100.00%		H3D8L5              	100.00%
F6ZVR9              	16.39%		
F7AJJ2              	12.69%		
F6TUF1              	8.78%		
Bootstrap support for F6PWZ1 as seed ortholog is 56%.
Alternative seed ortholog is H2Y1L6 (28 bits away from this cluster)
Bootstrap support for H3D8L5 as seed ortholog is 85%.

Group of orthologs #1149. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:307

F6SRA1              	100.00%		H3DDX9              	100.00%
Bootstrap support for F6SRA1 as seed ortholog is 100%.
Bootstrap support for H3DDX9 as seed ortholog is 100%.

Group of orthologs #1150. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 T.nigroviridis:534

Q1RLG4              	100.00%		H3BZP9              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for H3BZP9 as seed ortholog is 100%.

Group of orthologs #1151. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 T.nigroviridis:534

F6U7M8              	100.00%		Q4T9H1              	100.00%
Bootstrap support for F6U7M8 as seed ortholog is 100%.
Bootstrap support for Q4T9H1 as seed ortholog is 100%.

Group of orthologs #1152. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 T.nigroviridis:534

F6Z6K5              	100.00%		H3DGH5              	100.00%
Bootstrap support for F6Z6K5 as seed ortholog is 100%.
Bootstrap support for H3DGH5 as seed ortholog is 100%.

Group of orthologs #1153. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 T.nigroviridis:215

H2Y307              	100.00%		H3D3P7              	100.00%
Bootstrap support for H2Y307 as seed ortholog is 100%.
Bootstrap support for H3D3P7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 T.nigroviridis:534

H2XQE4              	100.00%		Q4SY05              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for Q4SY05 as seed ortholog is 100%.

Group of orthologs #1155. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 T.nigroviridis:44

H2XXZ7              	100.00%		H3CRI0              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for H3CRI0 as seed ortholog is 95%.

Group of orthologs #1156. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 T.nigroviridis:532

Q9NL46              	100.00%		H3CXR9              	100.00%
                    	       		H3D0I7              	31.40%
                    	       		H3D4S3              	25.30%
Bootstrap support for Q9NL46 as seed ortholog is 100%.
Bootstrap support for H3CXR9 as seed ortholog is 100%.

Group of orthologs #1157. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:64

F6YP78              	100.00%		H3CGD9              	100.00%
F6WN12              	48.85%		
Bootstrap support for F6YP78 as seed ortholog is 98%.
Bootstrap support for H3CGD9 as seed ortholog is 96%.

Group of orthologs #1158. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 T.nigroviridis:532

H2XME0              	100.00%		Q2KN95              	100.00%
                    	       		H3CSZ6              	5.60%
Bootstrap support for H2XME0 as seed ortholog is 100%.
Bootstrap support for Q2KN95 as seed ortholog is 100%.

Group of orthologs #1159. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 T.nigroviridis:532

F6WLN1              	100.00%		H3C0G9              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for H3C0G9 as seed ortholog is 100%.

Group of orthologs #1160. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 T.nigroviridis:532

F6XUA1              	100.00%		H3CF91              	100.00%
Bootstrap support for F6XUA1 as seed ortholog is 100%.
Bootstrap support for H3CF91 as seed ortholog is 100%.

Group of orthologs #1161. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 T.nigroviridis:532

F6Z781              	100.00%		H3DDG9              	100.00%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for H3DDG9 as seed ortholog is 100%.

Group of orthologs #1162. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 T.nigroviridis:532

F7BBJ9              	100.00%		Q4STM3              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for Q4STM3 as seed ortholog is 100%.

Group of orthologs #1163. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 T.nigroviridis:339

F6R9S1              	100.00%		H3D2C9              	100.00%
                    	       		Q4RNM8              	37.57%
Bootstrap support for F6R9S1 as seed ortholog is 100%.
Bootstrap support for H3D2C9 as seed ortholog is 100%.

Group of orthologs #1164. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 T.nigroviridis:531

F6WXF1              	100.00%		H3DM36              	100.00%
Bootstrap support for F6WXF1 as seed ortholog is 100%.
Bootstrap support for H3DM36 as seed ortholog is 100%.

Group of orthologs #1165. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 T.nigroviridis:531

H2XLC1              	100.00%		H3DIE4              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for H3DIE4 as seed ortholog is 100%.

Group of orthologs #1166. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 T.nigroviridis:380

H2XVW1              	100.00%		H3D919              	100.00%
                    	       		H3DQM5              	30.03%
                    	       		H3BWC9              	9.41%
Bootstrap support for H2XVW1 as seed ortholog is 100%.
Bootstrap support for H3D919 as seed ortholog is 100%.

Group of orthologs #1167. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 T.nigroviridis:530

F6Y1T4              	100.00%		H3DLZ4              	100.00%
Bootstrap support for F6Y1T4 as seed ortholog is 100%.
Bootstrap support for H3DLZ4 as seed ortholog is 100%.

Group of orthologs #1168. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:401

F6VJT7              	100.00%		H3DE35              	100.00%
F7BLJ0              	9.67%		H3C9A9              	10.74%
Bootstrap support for F6VJT7 as seed ortholog is 86%.
Bootstrap support for H3DE35 as seed ortholog is 100%.

Group of orthologs #1169. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:529

F6UR25              	100.00%		H3BYG0              	100.00%
Bootstrap support for F6UR25 as seed ortholog is 100%.
Bootstrap support for H3BYG0 as seed ortholog is 100%.

Group of orthologs #1170. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 T.nigroviridis:529

H2XNB1              	100.00%		H3CU19              	100.00%
Bootstrap support for H2XNB1 as seed ortholog is 100%.
Bootstrap support for H3CU19 as seed ortholog is 100%.

Group of orthologs #1171. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:528

F7AAA7              	100.00%		H3D998              	100.00%
                    	       		H3BYE5              	7.54%
Bootstrap support for F7AAA7 as seed ortholog is 100%.
Bootstrap support for H3D998 as seed ortholog is 100%.

Group of orthologs #1172. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:528

F6X4W9              	100.00%		H3BYT3              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for H3BYT3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:528

F6PQW9              	100.00%		H3CYK9              	100.00%
Bootstrap support for F6PQW9 as seed ortholog is 100%.
Bootstrap support for H3CYK9 as seed ortholog is 100%.

Group of orthologs #1174. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:528

F6R5G5              	100.00%		H3D133              	100.00%
Bootstrap support for F6R5G5 as seed ortholog is 100%.
Bootstrap support for H3D133 as seed ortholog is 100%.

Group of orthologs #1175. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:528

F6W067              	100.00%		H3DLF5              	100.00%
Bootstrap support for F6W067 as seed ortholog is 100%.
Bootstrap support for H3DLF5 as seed ortholog is 100%.

Group of orthologs #1176. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 T.nigroviridis:528

H2XQ25              	100.00%		H3DKQ1              	100.00%
Bootstrap support for H2XQ25 as seed ortholog is 100%.
Bootstrap support for H3DKQ1 as seed ortholog is 100%.

Group of orthologs #1177. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 T.nigroviridis:527

F6PG92              	100.00%		H3CGR7              	100.00%
Bootstrap support for F6PG92 as seed ortholog is 100%.
Bootstrap support for H3CGR7 as seed ortholog is 100%.

Group of orthologs #1178. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:60

H2Y369              	100.00%		H3DFC8              	100.00%
Bootstrap support for H2Y369 as seed ortholog is 88%.
Bootstrap support for H3DFC8 as seed ortholog is 90%.

Group of orthologs #1179. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 T.nigroviridis:526

F6VWV8              	100.00%		H3BZK9              	100.00%
Bootstrap support for F6VWV8 as seed ortholog is 100%.
Bootstrap support for H3BZK9 as seed ortholog is 100%.

Group of orthologs #1180. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 T.nigroviridis:526

F6UGC2              	100.00%		H3D7A2              	100.00%
Bootstrap support for F6UGC2 as seed ortholog is 100%.
Bootstrap support for H3D7A2 as seed ortholog is 100%.

Group of orthologs #1181. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:526

F6ZFS8              	100.00%		H3CUP5              	100.00%
Bootstrap support for F6ZFS8 as seed ortholog is 100%.
Bootstrap support for H3CUP5 as seed ortholog is 100%.

Group of orthologs #1182. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:245

F7A2K6              	100.00%		H3D1N8              	100.00%
                    	       		H3CUK7              	33.17%
Bootstrap support for F7A2K6 as seed ortholog is 99%.
Bootstrap support for H3D1N8 as seed ortholog is 100%.

Group of orthologs #1183. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 T.nigroviridis:525

H2Y164              	100.00%		H3DA13              	100.00%
                    	       		H3D044              	23.21%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for H3DA13 as seed ortholog is 100%.

Group of orthologs #1184. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 T.nigroviridis:525

F7BD94              	100.00%		H3C9L9              	100.00%
Bootstrap support for F7BD94 as seed ortholog is 100%.
Bootstrap support for H3C9L9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 T.nigroviridis:525

F6W673              	100.00%		H3D3A5              	100.00%
Bootstrap support for F6W673 as seed ortholog is 100%.
Bootstrap support for H3D3A5 as seed ortholog is 100%.

Group of orthologs #1186. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 T.nigroviridis:525

H2XWZ0              	100.00%		H3C5A9              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for H3C5A9 as seed ortholog is 100%.

Group of orthologs #1187. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:170

F6WY28              	100.00%		H3CA27              	100.00%
                    	       		H3CJG1              	29.14%
Bootstrap support for F6WY28 as seed ortholog is 99%.
Bootstrap support for H3CA27 as seed ortholog is 99%.

Group of orthologs #1188. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 T.nigroviridis:524

F6ZP25              	100.00%		H3D026              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for H3D026 as seed ortholog is 100%.

Group of orthologs #1189. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 T.nigroviridis:524

F6RKR7              	100.00%		Q4REF0              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for Q4REF0 as seed ortholog is 100%.

Group of orthologs #1190. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 T.nigroviridis:523

H2XWR9              	100.00%		H3CDX9              	100.00%
Bootstrap support for H2XWR9 as seed ortholog is 100%.
Bootstrap support for H3CDX9 as seed ortholog is 100%.

Group of orthologs #1191. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 T.nigroviridis:523

F6UF11              	100.00%		H3DQ13              	100.00%
Bootstrap support for F6UF11 as seed ortholog is 100%.
Bootstrap support for H3DQ13 as seed ortholog is 100%.

Group of orthologs #1192. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 T.nigroviridis:196

F6ZFE0              	100.00%		Q4SS88              	100.00%
Bootstrap support for F6ZFE0 as seed ortholog is 100%.
Bootstrap support for Q4SS88 as seed ortholog is 100%.

Group of orthologs #1193. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:522

F6SI87              	100.00%		H3DD94              	100.00%
                    	       		H3D3P0              	35.93%
Bootstrap support for F6SI87 as seed ortholog is 100%.
Bootstrap support for H3DD94 as seed ortholog is 100%.

Group of orthologs #1194. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:522

F6PYJ8              	100.00%		H3CQX6              	100.00%
Bootstrap support for F6PYJ8 as seed ortholog is 100%.
Bootstrap support for H3CQX6 as seed ortholog is 100%.

Group of orthologs #1195. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:522

F6TGX2              	100.00%		H3D2N1              	100.00%
Bootstrap support for F6TGX2 as seed ortholog is 100%.
Bootstrap support for H3D2N1 as seed ortholog is 100%.

Group of orthologs #1196. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:522

F6WQG9              	100.00%		H3D1K0              	100.00%
Bootstrap support for F6WQG9 as seed ortholog is 100%.
Bootstrap support for H3D1K0 as seed ortholog is 100%.

Group of orthologs #1197. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:522

F7AX15              	100.00%		H3D8H5              	100.00%
Bootstrap support for F7AX15 as seed ortholog is 100%.
Bootstrap support for H3D8H5 as seed ortholog is 100%.

Group of orthologs #1198. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 T.nigroviridis:522

F6X3S3              	100.00%		Q4RG23              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for Q4RG23 as seed ortholog is 100%.

Group of orthologs #1199. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 T.nigroviridis:521

F6S4V6              	100.00%		H3DAN5              	100.00%
Bootstrap support for F6S4V6 as seed ortholog is 100%.
Bootstrap support for H3DAN5 as seed ortholog is 100%.

Group of orthologs #1200. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 T.nigroviridis:520

H2Y2M6              	100.00%		H3CVZ6              	100.00%
H2XK55              	73.18%		
Bootstrap support for H2Y2M6 as seed ortholog is 100%.
Bootstrap support for H3CVZ6 as seed ortholog is 100%.

Group of orthologs #1201. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:301

F6TSM0              	100.00%		H3DBN0              	100.00%
Bootstrap support for F6TSM0 as seed ortholog is 100%.
Bootstrap support for H3DBN0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 T.nigroviridis:520

F7BLS5              	100.00%		H3CLZ4              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for H3CLZ4 as seed ortholog is 100%.

Group of orthologs #1203. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 T.nigroviridis:520

F7A5L4              	100.00%		H3D2U9              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for H3D2U9 as seed ortholog is 100%.

Group of orthologs #1204. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 T.nigroviridis:519

F6WWX5              	100.00%		H3D2U0              	100.00%
Bootstrap support for F6WWX5 as seed ortholog is 100%.
Bootstrap support for H3D2U0 as seed ortholog is 100%.

Group of orthologs #1205. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 T.nigroviridis:362

F7A8T7              	100.00%		H3CCH3              	100.00%
                    	       		H3CPA7              	6.03%
Bootstrap support for F7A8T7 as seed ortholog is 100%.
Bootstrap support for H3CCH3 as seed ortholog is 100%.

Group of orthologs #1206. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:284

H2XZZ6              	100.00%		H3D0Z2              	100.00%
                    	       		H3D8Z9              	10.53%
Bootstrap support for H2XZZ6 as seed ortholog is 100%.
Bootstrap support for H3D0Z2 as seed ortholog is 100%.

Group of orthologs #1207. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 T.nigroviridis:518

H2XM76              	100.00%		H3C280              	100.00%
Bootstrap support for H2XM76 as seed ortholog is 100%.
Bootstrap support for H3C280 as seed ortholog is 100%.

Group of orthologs #1208. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 T.nigroviridis:518

F6ZZ65              	100.00%		H3CYE9              	100.00%
Bootstrap support for F6ZZ65 as seed ortholog is 100%.
Bootstrap support for H3CYE9 as seed ortholog is 100%.

Group of orthologs #1209. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:312

H2XQB4              	100.00%		H3DGA8              	100.00%
                    	       		H3CU97              	42.56%
                    	       		H3CZL4              	35.79%
                    	       		Q4T9N1              	31.19%
                    	       		H3CZN6              	23.49%
Bootstrap support for H2XQB4 as seed ortholog is 100%.
Bootstrap support for H3DGA8 as seed ortholog is 100%.

Group of orthologs #1210. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:258

F6RGG4              	100.00%		H3CNL3              	100.00%
                    	       		H3D383              	65.78%
                    	       		H3DBK2              	45.25%
                    	       		H3CFJ0              	10.65%
Bootstrap support for F6RGG4 as seed ortholog is 100%.
Bootstrap support for H3CNL3 as seed ortholog is 100%.

Group of orthologs #1211. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 T.nigroviridis:517

H2XX22              	100.00%		H3C3J4              	100.00%
                    	       		H3CRL9              	47.02%
                    	       		H3CWN0              	44.20%
                    	       		H3DNA5              	9.72%
Bootstrap support for H2XX22 as seed ortholog is 100%.
Bootstrap support for H3C3J4 as seed ortholog is 100%.

Group of orthologs #1212. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:109

F7ADD9              	100.00%		H3CTZ2              	100.00%
                    	       		H3C0W7              	32.64%
                    	       		H3D7X6              	14.35%
Bootstrap support for F7ADD9 as seed ortholog is 92%.
Bootstrap support for H3CTZ2 as seed ortholog is 93%.

Group of orthologs #1213. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:73

F6SCX5              	100.00%		H3DNP0              	100.00%
                    	       		H3DAS5              	27.34%
                    	       		H3DGE3              	15.62%
Bootstrap support for F6SCX5 as seed ortholog is 99%.
Bootstrap support for H3DNP0 as seed ortholog is 96%.

Group of orthologs #1214. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 T.nigroviridis:302

F6UIV5              	100.00%		H3CIM9              	100.00%
                    	       		H3CHX7              	8.24%
Bootstrap support for F6UIV5 as seed ortholog is 100%.
Bootstrap support for H3CIM9 as seed ortholog is 100%.

Group of orthologs #1215. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 T.nigroviridis:386

F6Q8D1              	100.00%		H3C1J4              	100.00%
Bootstrap support for F6Q8D1 as seed ortholog is 100%.
Bootstrap support for H3C1J4 as seed ortholog is 100%.

Group of orthologs #1216. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 T.nigroviridis:516

F6X413              	100.00%		H3CPR5              	100.00%
                    	       		H3DPU8              	30.25%
                    	       		H3D7C9              	22.16%
Bootstrap support for F6X413 as seed ortholog is 100%.
Bootstrap support for H3CPR5 as seed ortholog is 100%.

Group of orthologs #1217. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:11

F6SML2              	100.00%		H3DEE8              	100.00%
                    	       		H3DDD7              	22.38%
Bootstrap support for F6SML2 as seed ortholog is 100%.
Bootstrap support for H3DEE8 as seed ortholog is 65%.
Alternative seed ortholog is H3DEE9 (11 bits away from this cluster)

Group of orthologs #1218. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:71

F6SM21              	100.00%		H3DCH1              	100.00%
Bootstrap support for F6SM21 as seed ortholog is 100%.
Bootstrap support for H3DCH1 as seed ortholog is 94%.

Group of orthologs #1219. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 T.nigroviridis:398

F6SK29              	100.00%		Q4SDS8              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for Q4SDS8 as seed ortholog is 100%.

Group of orthologs #1220. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 T.nigroviridis:515

F6Y2U7              	100.00%		H3DED4              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for H3DED4 as seed ortholog is 100%.

Group of orthologs #1221. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 T.nigroviridis:515

F7A713              	100.00%		H3D7E2              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for H3D7E2 as seed ortholog is 100%.

Group of orthologs #1222. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 T.nigroviridis:515

F6VEI9              	100.00%		H3DPD7              	100.00%
Bootstrap support for F6VEI9 as seed ortholog is 100%.
Bootstrap support for H3DPD7 as seed ortholog is 100%.

Group of orthologs #1223. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:74

F6ZM65              	100.00%		H3DBG7              	100.00%
Bootstrap support for F6ZM65 as seed ortholog is 100%.
Bootstrap support for H3DBG7 as seed ortholog is 94%.

Group of orthologs #1224. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 T.nigroviridis:515

F6XL41              	100.00%		Q4SBG3              	100.00%
Bootstrap support for F6XL41 as seed ortholog is 100%.
Bootstrap support for Q4SBG3 as seed ortholog is 100%.

Group of orthologs #1225. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:296

F6XKS1              	100.00%		H3CQX9              	100.00%
H2Y3U6              	9.14%		
F6RQF2              	8.10%		
Bootstrap support for F6XKS1 as seed ortholog is 100%.
Bootstrap support for H3CQX9 as seed ortholog is 100%.

Group of orthologs #1226. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 T.nigroviridis:473

Q1RLG9              	100.00%		H3DEM5              	100.00%
                    	       		H3CGR5              	28.98%
Bootstrap support for Q1RLG9 as seed ortholog is 100%.
Bootstrap support for H3DEM5 as seed ortholog is 100%.

Group of orthologs #1227. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 T.nigroviridis:402

F6SSW4              	100.00%		H3DLD8              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for H3DLD8 as seed ortholog is 100%.

Group of orthologs #1228. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 T.nigroviridis:132

Q1RL93              	100.00%		H3D8E8              	100.00%
                    	       		H3CUB8              	27.33%
Bootstrap support for Q1RL93 as seed ortholog is 100%.
Bootstrap support for H3D8E8 as seed ortholog is 99%.

Group of orthologs #1229. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 T.nigroviridis:288

F6SXS1              	100.00%		H3CRK5              	100.00%
Bootstrap support for F6SXS1 as seed ortholog is 100%.
Bootstrap support for H3CRK5 as seed ortholog is 100%.

Group of orthologs #1230. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:26

F6TM76              	100.00%		H3D7G9              	100.00%
Bootstrap support for F6TM76 as seed ortholog is 99%.
Bootstrap support for H3D7G9 as seed ortholog is 72%.
Alternative seed ortholog is H3BXL1 (26 bits away from this cluster)

Group of orthologs #1231. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 T.nigroviridis:512

F7B6E8              	100.00%		H3CVR9              	100.00%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for H3CVR9 as seed ortholog is 100%.

Group of orthologs #1232. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 T.nigroviridis:111

F7BHB2              	100.00%		H3D6L7              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for H3D6L7 as seed ortholog is 99%.

Group of orthologs #1233. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 T.nigroviridis:512

F6ZCC7              	100.00%		H3DMC1              	100.00%
Bootstrap support for F6ZCC7 as seed ortholog is 100%.
Bootstrap support for H3DMC1 as seed ortholog is 100%.

Group of orthologs #1234. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 T.nigroviridis:512

Q1RPV0              	100.00%		H3CTU2              	100.00%
Bootstrap support for Q1RPV0 as seed ortholog is 100%.
Bootstrap support for H3CTU2 as seed ortholog is 100%.

Group of orthologs #1235. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 T.nigroviridis:512

H2XTN4              	100.00%		H3DEZ4              	100.00%
Bootstrap support for H2XTN4 as seed ortholog is 100%.
Bootstrap support for H3DEZ4 as seed ortholog is 100%.

Group of orthologs #1236. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:376

Q1RQ07              	100.00%		H3D629              	100.00%
Bootstrap support for Q1RQ07 as seed ortholog is 99%.
Bootstrap support for H3D629 as seed ortholog is 100%.

Group of orthologs #1237. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 T.nigroviridis:511

F6SLD6              	100.00%		H3D6D6              	100.00%
Bootstrap support for F6SLD6 as seed ortholog is 100%.
Bootstrap support for H3D6D6 as seed ortholog is 100%.

Group of orthologs #1238. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 T.nigroviridis:511

F6ZVE7              	100.00%		H3CHP0              	100.00%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for H3CHP0 as seed ortholog is 100%.

Group of orthologs #1239. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 T.nigroviridis:511

F6ZGK8              	100.00%		H3D3Z5              	100.00%
Bootstrap support for F6ZGK8 as seed ortholog is 100%.
Bootstrap support for H3D3Z5 as seed ortholog is 100%.

Group of orthologs #1240. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 T.nigroviridis:511

F6TT57              	100.00%		H3DNC9              	100.00%
Bootstrap support for F6TT57 as seed ortholog is 100%.
Bootstrap support for H3DNC9 as seed ortholog is 100%.

Group of orthologs #1241. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 T.nigroviridis:347

F6UD02              	100.00%		H3C1J9              	100.00%
                    	       		H3DAN3              	35.85%
Bootstrap support for F6UD02 as seed ortholog is 100%.
Bootstrap support for H3C1J9 as seed ortholog is 100%.

Group of orthologs #1242. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 T.nigroviridis:510

F6TEA0              	100.00%		H3D931              	100.00%
                    	       		H3D212              	12.39%
Bootstrap support for F6TEA0 as seed ortholog is 100%.
Bootstrap support for H3D931 as seed ortholog is 100%.

Group of orthologs #1243. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 T.nigroviridis:394

F7AY24              	100.00%		H3CSB7              	100.00%
                    	       		H3BY10              	24.92%
Bootstrap support for F7AY24 as seed ortholog is 100%.
Bootstrap support for H3CSB7 as seed ortholog is 100%.

Group of orthologs #1244. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 T.nigroviridis:510

F6UZU2              	100.00%		H3C730              	100.00%
Bootstrap support for F6UZU2 as seed ortholog is 100%.
Bootstrap support for H3C730 as seed ortholog is 100%.

Group of orthologs #1245. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 T.nigroviridis:510

F6TFJ1              	100.00%		H3CFJ9              	100.00%
Bootstrap support for F6TFJ1 as seed ortholog is 100%.
Bootstrap support for H3CFJ9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:60

F6PKL5              	100.00%		H3CSK2              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 100%.
Bootstrap support for H3CSK2 as seed ortholog is 95%.

Group of orthologs #1247. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 T.nigroviridis:510

F6ZUV7              	100.00%		Q4RRG7              	100.00%
Bootstrap support for F6ZUV7 as seed ortholog is 100%.
Bootstrap support for Q4RRG7 as seed ortholog is 100%.

Group of orthologs #1248. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 T.nigroviridis:509

F6XHG6              	100.00%		H3CII6              	100.00%
                    	       		H3CII5              	14.91%
                    	       		H3DG56              	9.39%
Bootstrap support for F6XHG6 as seed ortholog is 100%.
Bootstrap support for H3CII6 as seed ortholog is 100%.

Group of orthologs #1249. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 T.nigroviridis:509

F6RMT1              	100.00%		H3CM26              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for H3CM26 as seed ortholog is 100%.

Group of orthologs #1250. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:373

F6X1K6              	100.00%		H3D1H9              	100.00%
Bootstrap support for F6X1K6 as seed ortholog is 100%.
Bootstrap support for H3D1H9 as seed ortholog is 100%.

Group of orthologs #1251. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 T.nigroviridis:413

F6ZFW2              	100.00%		H3CTV1              	100.00%
Bootstrap support for F6ZFW2 as seed ortholog is 100%.
Bootstrap support for H3CTV1 as seed ortholog is 100%.

Group of orthologs #1252. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 T.nigroviridis:509

F7BCV4              	100.00%		Q4RRE6              	100.00%
Bootstrap support for F7BCV4 as seed ortholog is 100%.
Bootstrap support for Q4RRE6 as seed ortholog is 100%.

Group of orthologs #1253. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 T.nigroviridis:451

F6SML9              	100.00%		H3CMM4              	100.00%
Bootstrap support for F6SML9 as seed ortholog is 100%.
Bootstrap support for H3CMM4 as seed ortholog is 100%.

Group of orthologs #1254. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 T.nigroviridis:508

H2Y1I4              	100.00%		Q4SGE4              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for Q4SGE4 as seed ortholog is 100%.

Group of orthologs #1255. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 T.nigroviridis:195

F7A6C5              	100.00%		H3D536              	100.00%
                    	       		H3C5R9              	5.45%
Bootstrap support for F7A6C5 as seed ortholog is 100%.
Bootstrap support for H3D536 as seed ortholog is 99%.

Group of orthologs #1256. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:300

F7B3K0              	100.00%		H3DPU0              	100.00%
                    	       		H3DNV1              	6.64%
Bootstrap support for F7B3K0 as seed ortholog is 100%.
Bootstrap support for H3DPU0 as seed ortholog is 100%.

Group of orthologs #1257. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 T.nigroviridis:292

Q4H3D5              	100.00%		H3D4G9              	100.00%
                    	       		H3CRR7              	13.66%
Bootstrap support for Q4H3D5 as seed ortholog is 100%.
Bootstrap support for H3D4G9 as seed ortholog is 100%.

Group of orthologs #1258. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 T.nigroviridis:323

F6XG93              	100.00%		H3DCL6              	100.00%
Bootstrap support for F6XG93 as seed ortholog is 100%.
Bootstrap support for H3DCL6 as seed ortholog is 100%.

Group of orthologs #1259. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:121

F6VES6              	100.00%		H3DG02              	100.00%
F6W5K3              	8.62%		
Bootstrap support for F6VES6 as seed ortholog is 97%.
Bootstrap support for H3DG02 as seed ortholog is 99%.

Group of orthologs #1260. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:182

F6SR69              	100.00%		H3D4X3              	100.00%
                    	       		H3C6I5              	10.57%
Bootstrap support for F6SR69 as seed ortholog is 99%.
Bootstrap support for H3D4X3 as seed ortholog is 99%.

Group of orthologs #1261. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 T.nigroviridis:82

F6XEQ3              	100.00%		H3CZ87              	100.00%
                    	       		H3D4D2              	10.82%
Bootstrap support for F6XEQ3 as seed ortholog is 100%.
Bootstrap support for H3CZ87 as seed ortholog is 96%.

Group of orthologs #1262. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:118

F6XJF3              	100.00%		H3BXL9              	100.00%
Bootstrap support for F6XJF3 as seed ortholog is 100%.
Bootstrap support for H3BXL9 as seed ortholog is 98%.

Group of orthologs #1263. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 T.nigroviridis:436

F7B5G0              	100.00%		H3C0H7              	100.00%
Bootstrap support for F7B5G0 as seed ortholog is 100%.
Bootstrap support for H3C0H7 as seed ortholog is 100%.

Group of orthologs #1264. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 T.nigroviridis:505

F6VN53              	100.00%		H3D6V2              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for H3D6V2 as seed ortholog is 100%.

Group of orthologs #1265. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 T.nigroviridis:505

F6V9Y2              	100.00%		H3DG85              	100.00%
Bootstrap support for F6V9Y2 as seed ortholog is 100%.
Bootstrap support for H3DG85 as seed ortholog is 100%.

Group of orthologs #1266. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 T.nigroviridis:341

F6YKR1              	100.00%		H3DLY3              	100.00%
Bootstrap support for F6YKR1 as seed ortholog is 100%.
Bootstrap support for H3DLY3 as seed ortholog is 100%.

Group of orthologs #1267. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 T.nigroviridis:30

F7BAF2              	100.00%		H3DC85              	100.00%
Bootstrap support for F7BAF2 as seed ortholog is 94%.
Bootstrap support for H3DC85 as seed ortholog is 72%.
Alternative seed ortholog is H3CKV7 (30 bits away from this cluster)

Group of orthologs #1268. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 T.nigroviridis:504

F6VUM2              	100.00%		H3DCP9              	100.00%
Bootstrap support for F6VUM2 as seed ortholog is 100%.
Bootstrap support for H3DCP9 as seed ortholog is 100%.

Group of orthologs #1269. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 T.nigroviridis:504

F6Z3S5              	100.00%		H3D556              	100.00%
Bootstrap support for F6Z3S5 as seed ortholog is 100%.
Bootstrap support for H3D556 as seed ortholog is 100%.

Group of orthologs #1270. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 T.nigroviridis:460

F6WBK6              	100.00%		H3CW16              	100.00%
Bootstrap support for F6WBK6 as seed ortholog is 100%.
Bootstrap support for H3CW16 as seed ortholog is 100%.

Group of orthologs #1271. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:113

F6WYA1              	100.00%		H3D302              	100.00%
Bootstrap support for F6WYA1 as seed ortholog is 100%.
Bootstrap support for H3D302 as seed ortholog is 99%.

Group of orthologs #1272. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 T.nigroviridis:503

F6WRC9              	100.00%		H3DFU6              	100.00%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for H3DFU6 as seed ortholog is 100%.

Group of orthologs #1273. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 T.nigroviridis:502

F6QEV0              	100.00%		H3C1V1              	100.00%
                    	       		H3DL47              	17.95%
Bootstrap support for F6QEV0 as seed ortholog is 100%.
Bootstrap support for H3C1V1 as seed ortholog is 100%.

Group of orthologs #1274. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:177

H2XQ18              	100.00%		H3CFN1              	100.00%
Bootstrap support for H2XQ18 as seed ortholog is 100%.
Bootstrap support for H3CFN1 as seed ortholog is 99%.

Group of orthologs #1275. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 T.nigroviridis:502

F6Z672              	100.00%		H3D8F5              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for H3D8F5 as seed ortholog is 100%.

Group of orthologs #1276. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 T.nigroviridis:502

F6XLS2              	100.00%		H3DJI2              	100.00%
Bootstrap support for F6XLS2 as seed ortholog is 100%.
Bootstrap support for H3DJI2 as seed ortholog is 100%.

Group of orthologs #1277. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 T.nigroviridis:502

F7AZV0              	100.00%		H3DJ60              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for H3DJ60 as seed ortholog is 100%.

Group of orthologs #1278. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 T.nigroviridis:370

F6SMZ6              	100.00%		H3CAW1              	100.00%
                    	       		H3DIU4              	35.77%
Bootstrap support for F6SMZ6 as seed ortholog is 100%.
Bootstrap support for H3CAW1 as seed ortholog is 100%.

Group of orthologs #1279. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 T.nigroviridis:442

H2Y2K5              	100.00%		H3CP62              	100.00%
F6VXL3              	14.55%		
Bootstrap support for H2Y2K5 as seed ortholog is 100%.
Bootstrap support for H3CP62 as seed ortholog is 100%.

Group of orthologs #1280. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 T.nigroviridis:501

F6YGR5              	100.00%		H3CA72              	100.00%
Bootstrap support for F6YGR5 as seed ortholog is 100%.
Bootstrap support for H3CA72 as seed ortholog is 100%.

Group of orthologs #1281. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 T.nigroviridis:501

F6RSZ1              	100.00%		H3CZJ0              	100.00%
Bootstrap support for F6RSZ1 as seed ortholog is 100%.
Bootstrap support for H3CZJ0 as seed ortholog is 100%.

Group of orthologs #1282. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 T.nigroviridis:501

F6TBI8              	100.00%		H3DBW1              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for H3DBW1 as seed ortholog is 100%.

Group of orthologs #1283. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 T.nigroviridis:106

F6V4L6              	100.00%		H3DFH1              	100.00%
                    	       		H3CDF1              	28.66%
                    	       		H3DLJ7              	14.01%
Bootstrap support for F6V4L6 as seed ortholog is 100%.
Bootstrap support for H3DFH1 as seed ortholog is 98%.

Group of orthologs #1284. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:312

F6ZQY6              	100.00%		H3CF23              	100.00%
Bootstrap support for F6ZQY6 as seed ortholog is 99%.
Bootstrap support for H3CF23 as seed ortholog is 100%.

Group of orthologs #1285. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 T.nigroviridis:500

F6UGN5              	100.00%		H3DAI3              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for H3DAI3 as seed ortholog is 100%.

Group of orthologs #1286. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 T.nigroviridis:500

F6UQL0              	100.00%		H3DD24              	100.00%
Bootstrap support for F6UQL0 as seed ortholog is 100%.
Bootstrap support for H3DD24 as seed ortholog is 100%.

Group of orthologs #1287. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 T.nigroviridis:499

F6UE58              	100.00%		H3C056              	100.00%
                    	       		H3CZV7              	28.25%
Bootstrap support for F6UE58 as seed ortholog is 100%.
Bootstrap support for H3C056 as seed ortholog is 100%.

Group of orthologs #1288. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 T.nigroviridis:499

F6UQM6              	100.00%		H3CHA0              	100.00%
Bootstrap support for F6UQM6 as seed ortholog is 100%.
Bootstrap support for H3CHA0 as seed ortholog is 100%.

Group of orthologs #1289. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 T.nigroviridis:499

F7BH52              	100.00%		H3CXA9              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 100%.
Bootstrap support for H3CXA9 as seed ortholog is 100%.

Group of orthologs #1290. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 T.nigroviridis:499

F6YGD1              	100.00%		H3DJG0              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for H3DJG0 as seed ortholog is 100%.

Group of orthologs #1291. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 T.nigroviridis:499

F7A5J2              	100.00%		Q4S9B4              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for Q4S9B4 as seed ortholog is 100%.

Group of orthologs #1292. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 T.nigroviridis:498

F6R213              	100.00%		H3DAV5              	100.00%
Bootstrap support for F6R213 as seed ortholog is 100%.
Bootstrap support for H3DAV5 as seed ortholog is 100%.

Group of orthologs #1293. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:498

F6XBA5              	100.00%		H3D427              	100.00%
Bootstrap support for F6XBA5 as seed ortholog is 99%.
Bootstrap support for H3D427 as seed ortholog is 100%.

Group of orthologs #1294. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 T.nigroviridis:498

F6R763              	100.00%		H3DNG0              	100.00%
Bootstrap support for F6R763 as seed ortholog is 100%.
Bootstrap support for H3DNG0 as seed ortholog is 100%.

Group of orthologs #1295. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 T.nigroviridis:497

F6VTU7              	100.00%		H3D3S4              	100.00%
H2XPZ6              	8.38%		H3C2L8              	11.34%
                    	       		Q4RYZ7              	9.60%
                    	       		H3D3R4              	8.38%
Bootstrap support for F6VTU7 as seed ortholog is 82%.
Bootstrap support for H3D3S4 as seed ortholog is 100%.

Group of orthologs #1296. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 T.nigroviridis:496

F6RXZ8              	100.00%		Q4SW80              	100.00%
                    	       		H3CS86              	14.93%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for Q4SW80 as seed ortholog is 100%.

Group of orthologs #1297. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:96

F6R3U4              	100.00%		H3DNV8              	100.00%
Bootstrap support for F6R3U4 as seed ortholog is 97%.
Bootstrap support for H3DNV8 as seed ortholog is 96%.

Group of orthologs #1298. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 T.nigroviridis:495

F6PP44              	100.00%		H3D9P4              	100.00%
                    	       		H3CX83              	13.11%
                    	       		H3DCM1              	10.86%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for H3D9P4 as seed ortholog is 100%.

Group of orthologs #1299. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 T.nigroviridis:495

F6YVU0              	100.00%		H3DBV6              	100.00%
                    	       		H3DLY1              	39.11%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for H3DBV6 as seed ortholog is 100%.

Group of orthologs #1300. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 T.nigroviridis:323

H2XVD0              	100.00%		H3DNN9              	100.00%
                    	       		H3CAS9              	13.79%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for H3DNN9 as seed ortholog is 100%.

Group of orthologs #1301. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 T.nigroviridis:495

F7BE59              	100.00%		H3DKV3              	100.00%
Bootstrap support for F7BE59 as seed ortholog is 100%.
Bootstrap support for H3DKV3 as seed ortholog is 100%.

Group of orthologs #1302. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:9

F6X7T3              	100.00%		H3D1D4              	100.00%
F6Y178              	16.27%		H3C9D6              	21.67%
Bootstrap support for F6X7T3 as seed ortholog is 82%.
Bootstrap support for H3D1D4 as seed ortholog is 55%.
Alternative seed ortholog is H3CEG4 (9 bits away from this cluster)

Group of orthologs #1303. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:125

F7AQQ6              	100.00%		H3CR91              	100.00%
F6QUA3              	5.66%		
Bootstrap support for F7AQQ6 as seed ortholog is 95%.
Bootstrap support for H3CR91 as seed ortholog is 98%.

Group of orthologs #1304. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:494 T.nigroviridis:494

F6SZY0              	100.00%		H3DN92              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for H3DN92 as seed ortholog is 100%.

Group of orthologs #1305. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 T.nigroviridis:339

F7AXN3              	100.00%		H3DJ12              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 100%.
Bootstrap support for H3DJ12 as seed ortholog is 100%.

Group of orthologs #1306. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 T.nigroviridis:285

Q9NL28              	100.00%		H3D5I2              	100.00%
                    	       		H3CIU4              	50.55%
                    	       		H3CXW9              	7.88%
Bootstrap support for Q9NL28 as seed ortholog is 100%.
Bootstrap support for H3D5I2 as seed ortholog is 100%.

Group of orthologs #1307. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 T.nigroviridis:194

F6YXW3              	100.00%		H3D6N1              	100.00%
                    	       		H3C5Z9              	11.89%
Bootstrap support for F6YXW3 as seed ortholog is 100%.
Bootstrap support for H3D6N1 as seed ortholog is 99%.

Group of orthologs #1308. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:414

F6Z465              	100.00%		H3DMU2              	100.00%
                    	       		H3C7M7              	50.88%
Bootstrap support for F6Z465 as seed ortholog is 100%.
Bootstrap support for H3DMU2 as seed ortholog is 100%.

Group of orthologs #1309. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 T.nigroviridis:368

F6R4T5              	100.00%		H3C115              	100.00%
Bootstrap support for F6R4T5 as seed ortholog is 100%.
Bootstrap support for H3C115 as seed ortholog is 100%.

Group of orthologs #1310. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 T.nigroviridis:493

F6T957              	100.00%		H3CCT7              	100.00%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for H3CCT7 as seed ortholog is 100%.

Group of orthologs #1311. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 T.nigroviridis:493

F6QHG7              	100.00%		H3D6B4              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for H3D6B4 as seed ortholog is 100%.

Group of orthologs #1312. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:285

F7AJP1              	100.00%		H3CAP7              	100.00%
Bootstrap support for F7AJP1 as seed ortholog is 99%.
Bootstrap support for H3CAP7 as seed ortholog is 100%.

Group of orthologs #1313. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:305

F6WVT9              	100.00%		H3D5L6              	100.00%
Bootstrap support for F6WVT9 as seed ortholog is 98%.
Bootstrap support for H3D5L6 as seed ortholog is 100%.

Group of orthologs #1314. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:186

F7AQ62              	100.00%		H3D261              	100.00%
Bootstrap support for F7AQ62 as seed ortholog is 100%.
Bootstrap support for H3D261 as seed ortholog is 99%.

Group of orthologs #1315. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:110

F7A4A9              	100.00%		H3D046              	100.00%
                    	       		H3DBL8              	13.11%
                    	       		H3CPG8              	10.03%
                    	       		H3C0X6              	5.95%
Bootstrap support for F7A4A9 as seed ortholog is 100%.
Bootstrap support for H3D046 as seed ortholog is 99%.

Group of orthologs #1316. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:19

F6R798              	100.00%		H3CXY1              	100.00%
                    	       		H3CAB9              	10.43%
Bootstrap support for F6R798 as seed ortholog is 100%.
Bootstrap support for H3CXY1 as seed ortholog is 60%.
Alternative seed ortholog is H3C615 (19 bits away from this cluster)

Group of orthologs #1317. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 T.nigroviridis:223

H2XP89              	100.00%		H3DI10              	100.00%
                    	       		H3DG69              	36.83%
Bootstrap support for H2XP89 as seed ortholog is 100%.
Bootstrap support for H3DI10 as seed ortholog is 100%.

Group of orthologs #1318. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:492

F6TCF1              	100.00%		H3CN40              	100.00%
Bootstrap support for F6TCF1 as seed ortholog is 100%.
Bootstrap support for H3CN40 as seed ortholog is 100%.

Group of orthologs #1319. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:492

F6SZQ5              	100.00%		H3D4S7              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for H3D4S7 as seed ortholog is 100%.

Group of orthologs #1320. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:492

H2XL44              	100.00%		H3CCB5              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for H3CCB5 as seed ortholog is 100%.

Group of orthologs #1321. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 T.nigroviridis:492

F6WAW7              	100.00%		Q4SG11              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for Q4SG11 as seed ortholog is 100%.

Group of orthologs #1322. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 T.nigroviridis:492

Q8T8A6              	100.00%		H3DC51              	100.00%
Bootstrap support for Q8T8A6 as seed ortholog is 57%.
Alternative seed ortholog is F6XVB0 (10 bits away from this cluster)
Bootstrap support for H3DC51 as seed ortholog is 100%.

Group of orthologs #1323. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 T.nigroviridis:491

F7AX37              	100.00%		H3DFV5              	100.00%
                    	       		H3DMS4              	29.38%
                    	       		H3C5A3              	21.86%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for H3DFV5 as seed ortholog is 100%.

Group of orthologs #1324. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:187

F6SZT6              	100.00%		H3D6X4              	100.00%
                    	       		H3DGF4              	33.05%
Bootstrap support for F6SZT6 as seed ortholog is 95%.
Bootstrap support for H3D6X4 as seed ortholog is 99%.

Group of orthologs #1325. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:338

F6TX56              	100.00%		Q4S9H0              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for Q4S9H0 as seed ortholog is 100%.

Group of orthologs #1326. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 T.nigroviridis:490

F7B6S1              	100.00%		H3DKE0              	100.00%
                    	       		H3D827              	20.87%
                    	       		H3CNM6              	12.00%
Bootstrap support for F7B6S1 as seed ortholog is 100%.
Bootstrap support for H3DKE0 as seed ortholog is 100%.

Group of orthologs #1327. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 T.nigroviridis:490

F6SLC8              	100.00%		H3DHS4              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for H3DHS4 as seed ortholog is 100%.

Group of orthologs #1328. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 T.nigroviridis:406

F6PW19              	100.00%		H3D2I4              	100.00%
                    	       		H3D9W9              	35.66%
                    	       		H3CGQ7              	27.84%
Bootstrap support for F6PW19 as seed ortholog is 100%.
Bootstrap support for H3D2I4 as seed ortholog is 100%.

Group of orthologs #1329. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 T.nigroviridis:489

F6YIY8              	100.00%		H3DAY4              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for H3DAY4 as seed ortholog is 100%.

Group of orthologs #1330. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 T.nigroviridis:488

F6WEC9              	100.00%		H3CJN2              	100.00%
Bootstrap support for F6WEC9 as seed ortholog is 100%.
Bootstrap support for H3CJN2 as seed ortholog is 100%.

Group of orthologs #1331. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:53

F6Y403              	100.00%		H3CV82              	100.00%
Bootstrap support for F6Y403 as seed ortholog is 99%.
Bootstrap support for H3CV82 as seed ortholog is 83%.

Group of orthologs #1332. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 T.nigroviridis:488

F6VN41              	100.00%		Q4SFK8              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for Q4SFK8 as seed ortholog is 100%.

Group of orthologs #1333. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 T.nigroviridis:487

F6UTV1              	100.00%		H3CAD0              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for H3CAD0 as seed ortholog is 100%.

Group of orthologs #1334. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 T.nigroviridis:487

F6TBF9              	100.00%		H3CRJ8              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for H3CRJ8 as seed ortholog is 100%.

Group of orthologs #1335. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 T.nigroviridis:487

F7B7H5              	100.00%		H3CJF7              	100.00%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for H3CJF7 as seed ortholog is 100%.

Group of orthologs #1336. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 T.nigroviridis:423

F7B1X4              	100.00%		H3DCT1              	100.00%
Bootstrap support for F7B1X4 as seed ortholog is 100%.
Bootstrap support for H3DCT1 as seed ortholog is 100%.

Group of orthologs #1337. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 T.nigroviridis:486

F6U254              	100.00%		H3BZM4              	100.00%
                    	       		H3CP55              	23.84%
                    	       		H3D4P3              	16.56%
Bootstrap support for F6U254 as seed ortholog is 100%.
Bootstrap support for H3BZM4 as seed ortholog is 100%.

Group of orthologs #1338. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 T.nigroviridis:486

F6QNL7              	100.00%		H3CBP0              	100.00%
Bootstrap support for F6QNL7 as seed ortholog is 100%.
Bootstrap support for H3CBP0 as seed ortholog is 100%.

Group of orthologs #1339. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 T.nigroviridis:486

F6W097              	100.00%		H3DMF8              	100.00%
Bootstrap support for F6W097 as seed ortholog is 100%.
Bootstrap support for H3DMF8 as seed ortholog is 100%.

Group of orthologs #1340. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 T.nigroviridis:294

F6ZPY0              	100.00%		H3D5J1              	100.00%
                    	       		H3CET4              	24.70%
Bootstrap support for F6ZPY0 as seed ortholog is 100%.
Bootstrap support for H3D5J1 as seed ortholog is 100%.

Group of orthologs #1341. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 T.nigroviridis:377

F6QHM7              	100.00%		H3CLP0              	100.00%
Bootstrap support for F6QHM7 as seed ortholog is 100%.
Bootstrap support for H3CLP0 as seed ortholog is 100%.

Group of orthologs #1342. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 T.nigroviridis:485

H2XMI3              	100.00%		H3DG15              	100.00%
Bootstrap support for H2XMI3 as seed ortholog is 100%.
Bootstrap support for H3DG15 as seed ortholog is 100%.

Group of orthologs #1343. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 T.nigroviridis:484

F6UNT7              	100.00%		H3D9J8              	100.00%
                    	       		H3CMQ7              	12.05%
Bootstrap support for F6UNT7 as seed ortholog is 100%.
Bootstrap support for H3D9J8 as seed ortholog is 100%.

Group of orthologs #1344. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 T.nigroviridis:484

F6PY90              	100.00%		H3DPY1              	100.00%
                    	       		H3D9M7              	8.00%
Bootstrap support for F6PY90 as seed ortholog is 100%.
Bootstrap support for H3DPY1 as seed ortholog is 100%.

Group of orthologs #1345. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 T.nigroviridis:371

F7A7F8              	100.00%		H3DEY0              	100.00%
                    	       		H3D0N6              	13.26%
Bootstrap support for F7A7F8 as seed ortholog is 100%.
Bootstrap support for H3DEY0 as seed ortholog is 100%.

Group of orthologs #1346. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 T.nigroviridis:484

F6PRZ9              	100.00%		H3CIS9              	100.00%
Bootstrap support for F6PRZ9 as seed ortholog is 100%.
Bootstrap support for H3CIS9 as seed ortholog is 100%.

Group of orthologs #1347. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:251

F6X753              	100.00%		H3CQT7              	100.00%
Bootstrap support for F6X753 as seed ortholog is 100%.
Bootstrap support for H3CQT7 as seed ortholog is 100%.

Group of orthologs #1348. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:181

F7AMH7              	100.00%		H3CYV6              	100.00%
                    	       		H3DGT9              	35.79%
                    	       		H3CPR3              	30.65%
                    	       		H3CLD3              	29.33%
                    	       		H3C6V4              	28.93%
Bootstrap support for F7AMH7 as seed ortholog is 100%.
Bootstrap support for H3CYV6 as seed ortholog is 100%.

Group of orthologs #1349. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:483

F7AV11              	100.00%		H3CBS1              	100.00%
                    	       		H3D2W4              	6.22%
Bootstrap support for F7AV11 as seed ortholog is 100%.
Bootstrap support for H3CBS1 as seed ortholog is 100%.

Group of orthologs #1350. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:483

F6PKS2              	100.00%		H3DFA4              	100.00%
                    	       		H3D4C9              	27.57%
Bootstrap support for F6PKS2 as seed ortholog is 100%.
Bootstrap support for H3DFA4 as seed ortholog is 100%.

Group of orthologs #1351. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:256

F6PYE4              	100.00%		H3DHS0              	100.00%
                    	       		H3D4R1              	21.73%
Bootstrap support for F6PYE4 as seed ortholog is 100%.
Bootstrap support for H3DHS0 as seed ortholog is 99%.

Group of orthologs #1352. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:483

F6TJB5              	100.00%		H3CML3              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for H3CML3 as seed ortholog is 100%.

Group of orthologs #1353. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:483

F6V6S0              	100.00%		H3CGT9              	100.00%
Bootstrap support for F6V6S0 as seed ortholog is 100%.
Bootstrap support for H3CGT9 as seed ortholog is 100%.

Group of orthologs #1354. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 T.nigroviridis:422

F6R683              	100.00%		H3CUT3              	100.00%
Bootstrap support for F6R683 as seed ortholog is 100%.
Bootstrap support for H3CUT3 as seed ortholog is 100%.

Group of orthologs #1355. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:168

F6SYV7              	100.00%		H3D4D4              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for H3D4D4 as seed ortholog is 100%.

Group of orthologs #1356. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 T.nigroviridis:483

F7AVN1              	100.00%		H3CJ81              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for H3CJ81 as seed ortholog is 100%.

Group of orthologs #1357. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 T.nigroviridis:213

F6S4U2              	100.00%		H3CPE4              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for H3CPE4 as seed ortholog is 100%.

Group of orthologs #1358. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 T.nigroviridis:482

F6ZFJ9              	100.00%		H3CEM6              	100.00%
Bootstrap support for F6ZFJ9 as seed ortholog is 100%.
Bootstrap support for H3CEM6 as seed ortholog is 100%.

Group of orthologs #1359. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:202

F6U7S8              	100.00%		H3D4I0              	100.00%
Bootstrap support for F6U7S8 as seed ortholog is 99%.
Bootstrap support for H3D4I0 as seed ortholog is 99%.

Group of orthologs #1360. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:25

F7A9Y8              	100.00%		H3CYT2              	100.00%
Bootstrap support for F7A9Y8 as seed ortholog is 100%.
Bootstrap support for H3CYT2 as seed ortholog is 52%.
Alternative seed ortholog is H3CRK7 (25 bits away from this cluster)

Group of orthologs #1361. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:57

F7BEC5              	100.00%		H3CW35              	100.00%
Bootstrap support for F7BEC5 as seed ortholog is 100%.
Bootstrap support for H3CW35 as seed ortholog is 90%.

Group of orthologs #1362. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:261

H2XUP0              	100.00%		H3CJZ0              	100.00%
Bootstrap support for H2XUP0 as seed ortholog is 85%.
Bootstrap support for H3CJZ0 as seed ortholog is 99%.

Group of orthologs #1363. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 T.nigroviridis:482

F7ACJ3              	100.00%		H3DMW5              	100.00%
Bootstrap support for F7ACJ3 as seed ortholog is 100%.
Bootstrap support for H3DMW5 as seed ortholog is 100%.

Group of orthologs #1364. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 T.nigroviridis:150

Q1RPX1              	100.00%		H3D0P5              	100.00%
Bootstrap support for Q1RPX1 as seed ortholog is 100%.
Bootstrap support for H3D0P5 as seed ortholog is 99%.

Group of orthologs #1365. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 T.nigroviridis:358

F6WCA3              	100.00%		H3CS62              	100.00%
                    	       		H3BWN8              	30.71%
                    	       		H3C236              	28.27%
                    	       		H3DKD4              	15.75%
Bootstrap support for F6WCA3 as seed ortholog is 100%.
Bootstrap support for H3CS62 as seed ortholog is 100%.

Group of orthologs #1366. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 T.nigroviridis:80

F6UY72              	100.00%		H3DNY8              	100.00%
                    	       		H3BXW5              	9.07%
Bootstrap support for F6UY72 as seed ortholog is 100%.
Bootstrap support for H3DNY8 as seed ortholog is 91%.

Group of orthologs #1367. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 T.nigroviridis:122

F7BB43              	100.00%		H3BZS2              	100.00%
Bootstrap support for F7BB43 as seed ortholog is 100%.
Bootstrap support for H3BZS2 as seed ortholog is 93%.

Group of orthologs #1368. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 T.nigroviridis:481

F6YLW1              	100.00%		H3CGA7              	100.00%
Bootstrap support for F6YLW1 as seed ortholog is 100%.
Bootstrap support for H3CGA7 as seed ortholog is 100%.

Group of orthologs #1369. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 T.nigroviridis:417

F6WLA0              	100.00%		H3CS21              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for H3CS21 as seed ortholog is 100%.

Group of orthologs #1370. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:481

F6UBT3              	100.00%		Q4SBG6              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for Q4SBG6 as seed ortholog is 100%.

Group of orthologs #1371. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 T.nigroviridis:481

F7AA01              	100.00%		H3DLT2              	100.00%
Bootstrap support for F7AA01 as seed ortholog is 100%.
Bootstrap support for H3DLT2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 T.nigroviridis:480

F6XMP8              	100.00%		H3D706              	100.00%
                    	       		H3CUT0              	72.03%
                    	       		H3DHM6              	47.15%
                    	       		H3DKL7              	38.49%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for H3D706 as seed ortholog is 100%.

Group of orthologs #1373. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 T.nigroviridis:480

F6PZT9              	100.00%		H3D5H6              	100.00%
Bootstrap support for F6PZT9 as seed ortholog is 100%.
Bootstrap support for H3D5H6 as seed ortholog is 100%.

Group of orthologs #1374. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 T.nigroviridis:480

F6QTS6              	100.00%		H3D852              	100.00%
Bootstrap support for F6QTS6 as seed ortholog is 100%.
Bootstrap support for H3D852 as seed ortholog is 100%.

Group of orthologs #1375. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:203

F6U7Z2              	100.00%		Q4T5A1              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 100%.
Bootstrap support for Q4T5A1 as seed ortholog is 100%.

Group of orthologs #1376. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 T.nigroviridis:479

F6U144              	100.00%		H3CG61              	100.00%
Bootstrap support for F6U144 as seed ortholog is 100%.
Bootstrap support for H3CG61 as seed ortholog is 100%.

Group of orthologs #1377. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 T.nigroviridis:479

F6SFP2              	100.00%		H3D8T0              	100.00%
Bootstrap support for F6SFP2 as seed ortholog is 100%.
Bootstrap support for H3D8T0 as seed ortholog is 100%.

Group of orthologs #1378. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 T.nigroviridis:479

H2XZM3              	100.00%		H3C7X4              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for H3C7X4 as seed ortholog is 100%.

Group of orthologs #1379. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:216

D2KU21              	100.00%		H3D8X3              	100.00%
                    	       		H3DE86              	50.23%
                    	       		H3D9C8              	42.36%
                    	       		H3D5Z4              	33.10%
Bootstrap support for D2KU21 as seed ortholog is 100%.
Bootstrap support for H3D8X3 as seed ortholog is 100%.

Group of orthologs #1380. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 T.nigroviridis:478

F6UD40              	100.00%		H3CRY1              	100.00%
                    	       		H3DFX7              	30.38%
                    	       		H3CNN8              	14.08%
Bootstrap support for F6UD40 as seed ortholog is 100%.
Bootstrap support for H3CRY1 as seed ortholog is 100%.

Group of orthologs #1381. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 T.nigroviridis:478

F6QAP0              	100.00%		H3BW40              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for H3BW40 as seed ortholog is 100%.

Group of orthologs #1382. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 T.nigroviridis:478

F6QS75              	100.00%		H3CZW8              	100.00%
Bootstrap support for F6QS75 as seed ortholog is 100%.
Bootstrap support for H3CZW8 as seed ortholog is 100%.

Group of orthologs #1383. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:477

F6U4H3              	100.00%		H3CVU9              	100.00%
                    	       		H3CBS4              	15.00%
                    	       		H3CDI0              	5.62%
Bootstrap support for F6U4H3 as seed ortholog is 100%.
Bootstrap support for H3CVU9 as seed ortholog is 100%.

Group of orthologs #1384. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 T.nigroviridis:397

F6YGK4              	100.00%		H3D902              	100.00%
                    	       		H3DK60              	39.15%
                    	       		H3DGC7              	30.22%
Bootstrap support for F6YGK4 as seed ortholog is 100%.
Bootstrap support for H3D902 as seed ortholog is 100%.

Group of orthologs #1385. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:330

F6TLU2              	100.00%		H3BYJ6              	100.00%
                    	       		H3CRA9              	25.04%
Bootstrap support for F6TLU2 as seed ortholog is 62%.
Alternative seed ortholog is F6TZG1 (12 bits away from this cluster)
Bootstrap support for H3BYJ6 as seed ortholog is 100%.

Group of orthologs #1386. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 T.nigroviridis:477

F6ZYI6              	100.00%		H3CVK9              	100.00%
Bootstrap support for F6ZYI6 as seed ortholog is 100%.
Bootstrap support for H3CVK9 as seed ortholog is 100%.

Group of orthologs #1387. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 T.nigroviridis:245

F7BK08              	100.00%		H3CQI7              	100.00%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for H3CQI7 as seed ortholog is 100%.

Group of orthologs #1388. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 T.nigroviridis:477

F6SCN2              	100.00%		Q4RFD8              	100.00%
Bootstrap support for F6SCN2 as seed ortholog is 100%.
Bootstrap support for Q4RFD8 as seed ortholog is 100%.

Group of orthologs #1389. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:167

F6PTZ3              	100.00%		H3D7Y1              	100.00%
F6PUF3              	26.54%		
Bootstrap support for F6PTZ3 as seed ortholog is 99%.
Bootstrap support for H3D7Y1 as seed ortholog is 99%.

Group of orthologs #1390. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:476

F6Z9I2              	100.00%		H3CSA6              	100.00%
                    	       		H3D8S9              	30.22%
Bootstrap support for F6Z9I2 as seed ortholog is 100%.
Bootstrap support for H3CSA6 as seed ortholog is 100%.

Group of orthologs #1391. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 T.nigroviridis:344

F6R4D8              	100.00%		H3CDN8              	100.00%
Bootstrap support for F6R4D8 as seed ortholog is 100%.
Bootstrap support for H3CDN8 as seed ortholog is 100%.

Group of orthologs #1392. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 T.nigroviridis:300

F6Q989              	100.00%		H3CRF5              	100.00%
Bootstrap support for F6Q989 as seed ortholog is 100%.
Bootstrap support for H3CRF5 as seed ortholog is 100%.

Group of orthologs #1393. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 T.nigroviridis:476

F6SJ40              	100.00%		H3DEP3              	100.00%
Bootstrap support for F6SJ40 as seed ortholog is 100%.
Bootstrap support for H3DEP3 as seed ortholog is 100%.

Group of orthologs #1394. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 T.nigroviridis:476

F6VHE0              	100.00%		H3DI21              	100.00%
Bootstrap support for F6VHE0 as seed ortholog is 100%.
Bootstrap support for H3DI21 as seed ortholog is 100%.

Group of orthologs #1395. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 T.nigroviridis:476

F7B4M1              	100.00%		Q4SXY4              	100.00%
Bootstrap support for F7B4M1 as seed ortholog is 100%.
Bootstrap support for Q4SXY4 as seed ortholog is 100%.

Group of orthologs #1396. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 T.nigroviridis:38

H2XZE3              	100.00%		H3DE26              	100.00%
Bootstrap support for H2XZE3 as seed ortholog is 100%.
Bootstrap support for H3DE26 as seed ortholog is 37%.
Alternative seed ortholog is H3DNH8 (38 bits away from this cluster)

Group of orthologs #1397. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:385

F6XR36              	100.00%		H3DBT8              	100.00%
                    	       		H3C9P1              	33.72%
                    	       		H3BXL4              	25.10%
Bootstrap support for F6XR36 as seed ortholog is 100%.
Bootstrap support for H3DBT8 as seed ortholog is 100%.

Group of orthologs #1398. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:475

F7ASD2              	100.00%		H3DME3              	100.00%
F6SRW6              	6.57%		
Bootstrap support for F7ASD2 as seed ortholog is 100%.
Bootstrap support for H3DME3 as seed ortholog is 100%.

Group of orthologs #1399. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 T.nigroviridis:425

F6X2C4              	100.00%		H3CAQ3              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for H3CAQ3 as seed ortholog is 100%.

Group of orthologs #1400. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:475

F6UVC2              	100.00%		H3D8N9              	100.00%
Bootstrap support for F6UVC2 as seed ortholog is 100%.
Bootstrap support for H3D8N9 as seed ortholog is 100%.

Group of orthologs #1401. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:475

F6V6M0              	100.00%		H3D8N4              	100.00%
Bootstrap support for F6V6M0 as seed ortholog is 100%.
Bootstrap support for H3D8N4 as seed ortholog is 100%.

Group of orthologs #1402. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 T.nigroviridis:475

H2XTB8              	100.00%		H3CBP5              	100.00%
Bootstrap support for H2XTB8 as seed ortholog is 100%.
Bootstrap support for H3CBP5 as seed ortholog is 100%.

Group of orthologs #1403. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 T.nigroviridis:379

F6S043              	100.00%		H3CPU3              	100.00%
Bootstrap support for F6S043 as seed ortholog is 100%.
Bootstrap support for H3CPU3 as seed ortholog is 100%.

Group of orthologs #1404. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 T.nigroviridis:474

F6ZTT3              	100.00%		H3CQ61              	100.00%
Bootstrap support for F6ZTT3 as seed ortholog is 100%.
Bootstrap support for H3CQ61 as seed ortholog is 100%.

Group of orthologs #1405. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 T.nigroviridis:474

F6TDZ5              	100.00%		Q4SRM0              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 100%.
Bootstrap support for Q4SRM0 as seed ortholog is 100%.

Group of orthologs #1406. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:87

F6VBC2              	100.00%		H3D739              	100.00%
                    	       		H3BZB9              	15.02%
                    	       		H3CL06              	9.42%
Bootstrap support for F6VBC2 as seed ortholog is 99%.
Bootstrap support for H3D739 as seed ortholog is 91%.

Group of orthologs #1407. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 T.nigroviridis:473

Q1RL77              	100.00%		H3CT96              	100.00%
                    	       		H3CJZ8              	26.70%
Bootstrap support for Q1RL77 as seed ortholog is 100%.
Bootstrap support for H3CT96 as seed ortholog is 100%.

Group of orthologs #1408. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:473

F6VKI2              	100.00%		H3CCX2              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for H3CCX2 as seed ortholog is 100%.

Group of orthologs #1409. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:328

H2XKP7              	100.00%		H3CGK4              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 99%.
Bootstrap support for H3CGK4 as seed ortholog is 100%.

Group of orthologs #1410. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 T.nigroviridis:473

F6ZYJ2              	100.00%		Q4T8X8              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for Q4T8X8 as seed ortholog is 100%.

Group of orthologs #1411. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:128

H2XQ32              	100.00%		H3DNF2              	100.00%
Bootstrap support for H2XQ32 as seed ortholog is 99%.
Bootstrap support for H3DNF2 as seed ortholog is 99%.

Group of orthologs #1412. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 T.nigroviridis:473

H2Y2G1              	100.00%		H3D7E3              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for H3D7E3 as seed ortholog is 100%.

Group of orthologs #1413. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 T.nigroviridis:85

F6W510              	100.00%		H3D311              	100.00%
                    	       		H3CET9              	6.91%
Bootstrap support for F6W510 as seed ortholog is 100%.
Bootstrap support for H3D311 as seed ortholog is 100%.

Group of orthologs #1414. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 T.nigroviridis:472

F7BNW5              	100.00%		H3DC70              	100.00%
                    	       		H3DAT3              	51.89%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for H3DC70 as seed ortholog is 100%.

Group of orthologs #1415. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 T.nigroviridis:430

Q1RPW9              	100.00%		H3DE42              	100.00%
                    	       		H3D9X8              	21.66%
Bootstrap support for Q1RPW9 as seed ortholog is 100%.
Bootstrap support for H3DE42 as seed ortholog is 100%.

Group of orthologs #1416. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:66

F6R4F4              	100.00%		H3CIZ5              	100.00%
Bootstrap support for F6R4F4 as seed ortholog is 100%.
Bootstrap support for H3CIZ5 as seed ortholog is 94%.

Group of orthologs #1417. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 T.nigroviridis:472

F7AEM1              	100.00%		H3C0G8              	100.00%
Bootstrap support for F7AEM1 as seed ortholog is 100%.
Bootstrap support for H3C0G8 as seed ortholog is 100%.

Group of orthologs #1418. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 T.nigroviridis:472

F6W6V6              	100.00%		H3CVU4              	100.00%
Bootstrap support for F6W6V6 as seed ortholog is 77%.
Bootstrap support for H3CVU4 as seed ortholog is 100%.

Group of orthologs #1419. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 T.nigroviridis:472

F6T2S3              	100.00%		H3DN04              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for H3DN04 as seed ortholog is 100%.

Group of orthologs #1420. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:413

F6XWW8              	100.00%		H3D910              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 99%.
Bootstrap support for H3D910 as seed ortholog is 100%.

Group of orthologs #1421. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:229

F7AZI8              	100.00%		H3DD82              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 100%.
Bootstrap support for H3DD82 as seed ortholog is 100%.

Group of orthologs #1422. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 T.nigroviridis:411

F6ZUD0              	100.00%		H3DQ17              	100.00%
Bootstrap support for F6ZUD0 as seed ortholog is 100%.
Bootstrap support for H3DQ17 as seed ortholog is 100%.

Group of orthologs #1423. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 T.nigroviridis:471

F6THY1              	100.00%		H3DJ22              	100.00%
                    	       		H3D077              	45.45%
                    	       		H3CWT9              	39.00%
Bootstrap support for F6THY1 as seed ortholog is 100%.
Bootstrap support for H3DJ22 as seed ortholog is 100%.

Group of orthologs #1424. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 T.nigroviridis:471

F6SUM0              	100.00%		H3C450              	100.00%
F7AAH8              	33.57%		
Bootstrap support for F6SUM0 as seed ortholog is 100%.
Bootstrap support for H3C450 as seed ortholog is 100%.

Group of orthologs #1425. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:299

F6XNC0              	100.00%		H3DBH0              	100.00%
                    	       		H3DHR6              	25.27%
Bootstrap support for F6XNC0 as seed ortholog is 85%.
Bootstrap support for H3DBH0 as seed ortholog is 99%.

Group of orthologs #1426. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:403

F6ZG18              	100.00%		H3DFF0              	100.00%
                    	       		H3DDT4              	46.22%
Bootstrap support for F6ZG18 as seed ortholog is 100%.
Bootstrap support for H3DFF0 as seed ortholog is 100%.

Group of orthologs #1427. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 T.nigroviridis:147

F6UAZ6              	100.00%		H3BXH2              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for H3BXH2 as seed ortholog is 99%.

Group of orthologs #1428. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 T.nigroviridis:200

F6YS67              	100.00%		H3BXH6              	100.00%
Bootstrap support for F6YS67 as seed ortholog is 100%.
Bootstrap support for H3BXH6 as seed ortholog is 100%.

Group of orthologs #1429. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:471

F6QXQ1              	100.00%		H3CT12              	100.00%
Bootstrap support for F6QXQ1 as seed ortholog is 99%.
Bootstrap support for H3CT12 as seed ortholog is 100%.

Group of orthologs #1430. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 T.nigroviridis:395

H2XX16              	100.00%		H3D4P0              	100.00%
Bootstrap support for H2XX16 as seed ortholog is 100%.
Bootstrap support for H3D4P0 as seed ortholog is 100%.

Group of orthologs #1431. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:372

F6PHN1              	100.00%		H3CYY3              	100.00%
Bootstrap support for F6PHN1 as seed ortholog is 100%.
Bootstrap support for H3CYY3 as seed ortholog is 100%.

Group of orthologs #1432. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:470

F6TC27              	100.00%		H3D087              	100.00%
Bootstrap support for F6TC27 as seed ortholog is 100%.
Bootstrap support for H3D087 as seed ortholog is 100%.

Group of orthologs #1433. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:372

F6W2S7              	100.00%		H3CVH9              	100.00%
Bootstrap support for F6W2S7 as seed ortholog is 100%.
Bootstrap support for H3CVH9 as seed ortholog is 100%.

Group of orthologs #1434. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 T.nigroviridis:470

F6YNQ3              	100.00%		H3D0K2              	100.00%
Bootstrap support for F6YNQ3 as seed ortholog is 100%.
Bootstrap support for H3D0K2 as seed ortholog is 100%.

Group of orthologs #1435. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 T.nigroviridis:470

F7BH80              	100.00%		H3DFZ4              	100.00%
Bootstrap support for F7BH80 as seed ortholog is 100%.
Bootstrap support for H3DFZ4 as seed ortholog is 100%.

Group of orthologs #1436. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:161

F6YFX5              	100.00%		H3DA78              	100.00%
                    	       		H3CU54              	46.29%
                    	       		H3CZM1              	32.67%
Bootstrap support for F6YFX5 as seed ortholog is 100%.
Bootstrap support for H3DA78 as seed ortholog is 99%.

Group of orthologs #1437. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:258

Q4H358              	100.00%		H3BY33              	100.00%
                    	       		H3CC31              	39.82%
Bootstrap support for Q4H358 as seed ortholog is 100%.
Bootstrap support for H3BY33 as seed ortholog is 100%.

Group of orthologs #1438. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 T.nigroviridis:469

F7B658              	100.00%		H3CGT4              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for H3CGT4 as seed ortholog is 100%.

Group of orthologs #1439. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 T.nigroviridis:469

F6S2A1              	100.00%		H3DJV0              	100.00%
Bootstrap support for F6S2A1 as seed ortholog is 100%.
Bootstrap support for H3DJV0 as seed ortholog is 100%.

Group of orthologs #1440. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 T.nigroviridis:308

F6WQ08              	100.00%		H3DH07              	100.00%
Bootstrap support for F6WQ08 as seed ortholog is 100%.
Bootstrap support for H3DH07 as seed ortholog is 100%.

Group of orthologs #1441. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:180

F7B7R9              	100.00%		H3CRD4              	100.00%
                    	       		H3CF60              	67.00%
Bootstrap support for F7B7R9 as seed ortholog is 98%.
Bootstrap support for H3CRD4 as seed ortholog is 99%.

Group of orthologs #1442. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 T.nigroviridis:468

F6SY86              	100.00%		H3CE85              	100.00%
Bootstrap support for F6SY86 as seed ortholog is 100%.
Bootstrap support for H3CE85 as seed ortholog is 100%.

Group of orthologs #1443. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 T.nigroviridis:468

F6TQG1              	100.00%		H3CYH4              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for H3CYH4 as seed ortholog is 100%.

Group of orthologs #1444. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:346

F6RS66              	100.00%		H3DCY1              	100.00%
Bootstrap support for F6RS66 as seed ortholog is 100%.
Bootstrap support for H3DCY1 as seed ortholog is 100%.

Group of orthologs #1445. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 T.nigroviridis:468

F7AA24              	100.00%		H3CNH1              	100.00%
Bootstrap support for F7AA24 as seed ortholog is 100%.
Bootstrap support for H3CNH1 as seed ortholog is 100%.

Group of orthologs #1446. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 T.nigroviridis:468

F6WNN3              	100.00%		H3DI36              	100.00%
Bootstrap support for F6WNN3 as seed ortholog is 100%.
Bootstrap support for H3DI36 as seed ortholog is 100%.

Group of orthologs #1447. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

F6Z2I4              	100.00%		H3CPJ9              	100.00%
                    	       		H3CAI0              	25.33%
                    	       		H3CPI9              	6.99%
Bootstrap support for F6Z2I4 as seed ortholog is 100%.
Bootstrap support for H3CPJ9 as seed ortholog is 100%.

Group of orthologs #1448. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:350

H2XKS2              	100.00%		H3CN76              	100.00%
                    	       		H3DLR7              	45.21%
                    	       		H3D0N2              	33.89%
Bootstrap support for H2XKS2 as seed ortholog is 100%.
Bootstrap support for H3CN76 as seed ortholog is 100%.

Group of orthologs #1449. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

F6X5M5              	100.00%		H3CPR9              	100.00%
                    	       		H3CYX3              	48.28%
Bootstrap support for F6X5M5 as seed ortholog is 100%.
Bootstrap support for H3CPR9 as seed ortholog is 100%.

Group of orthologs #1450. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:416

H2XQB0              	100.00%		H3CI21              	100.00%
                    	       		H3DKL8              	25.82%
Bootstrap support for H2XQB0 as seed ortholog is 100%.
Bootstrap support for H3CI21 as seed ortholog is 100%.

Group of orthologs #1451. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

F6Z9J5              	100.00%		H3CCZ4              	100.00%
Bootstrap support for F6Z9J5 as seed ortholog is 100%.
Bootstrap support for H3CCZ4 as seed ortholog is 100%.

Group of orthologs #1452. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:138

F6YNE2              	100.00%		H3CRK4              	100.00%
Bootstrap support for F6YNE2 as seed ortholog is 100%.
Bootstrap support for H3CRK4 as seed ortholog is 99%.

Group of orthologs #1453. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 T.nigroviridis:174

F6UAS2              	100.00%		H3D5Q0              	100.00%
Bootstrap support for F6UAS2 as seed ortholog is 100%.
Bootstrap support for H3D5Q0 as seed ortholog is 99%.

Group of orthologs #1454. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

F6VEG5              	100.00%		H3DBB2              	100.00%
Bootstrap support for F6VEG5 as seed ortholog is 100%.
Bootstrap support for H3DBB2 as seed ortholog is 100%.

Group of orthologs #1455. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:395

F6VAX6              	100.00%		H3DGS8              	100.00%
Bootstrap support for F6VAX6 as seed ortholog is 100%.
Bootstrap support for H3DGS8 as seed ortholog is 100%.

Group of orthologs #1456. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

F6XVX1              	100.00%		H3DBZ3              	100.00%
Bootstrap support for F6XVX1 as seed ortholog is 100%.
Bootstrap support for H3DBZ3 as seed ortholog is 100%.

Group of orthologs #1457. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

F7AHK9              	100.00%		H3D455              	100.00%
Bootstrap support for F7AHK9 as seed ortholog is 100%.
Bootstrap support for H3D455 as seed ortholog is 100%.

Group of orthologs #1458. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:336

F6ZIT4              	100.00%		H3DK14              	100.00%
Bootstrap support for F6ZIT4 as seed ortholog is 100%.
Bootstrap support for H3DK14 as seed ortholog is 100%.

Group of orthologs #1459. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 T.nigroviridis:467

H2Y0R2              	100.00%		H3DDU4              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for H3DDU4 as seed ortholog is 100%.

Group of orthologs #1460. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:158

F6TVX8              	100.00%		H3D8I6              	100.00%
                    	       		H3DLF6              	46.17%
                    	       		H3DLS2              	32.18%
                    	       		H3CXQ1              	21.84%
                    	       		H3CMG0              	7.47%
Bootstrap support for F6TVX8 as seed ortholog is 99%.
Bootstrap support for H3D8I6 as seed ortholog is 99%.

Group of orthologs #1461. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 T.nigroviridis:466

F6VI40              	100.00%		H3DHV3              	100.00%
                    	       		H3D4Q8              	42.27%
                    	       		H3DKE1              	10.97%
Bootstrap support for F6VI40 as seed ortholog is 100%.
Bootstrap support for H3DHV3 as seed ortholog is 100%.

Group of orthologs #1462. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 T.nigroviridis:361

H2XSA6              	100.00%		H3CA81              	100.00%
                    	       		H3CGE1              	10.37%
Bootstrap support for H2XSA6 as seed ortholog is 100%.
Bootstrap support for H3CA81 as seed ortholog is 100%.

Group of orthologs #1463. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:161

H2Y2I8              	100.00%		H3CSM5              	100.00%
                    	       		H3DPW3              	29.80%
Bootstrap support for H2Y2I8 as seed ortholog is 99%.
Bootstrap support for H3CSM5 as seed ortholog is 99%.

Group of orthologs #1464. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 T.nigroviridis:466

F6YAM0              	100.00%		H3CRT0              	100.00%
Bootstrap support for F6YAM0 as seed ortholog is 100%.
Bootstrap support for H3CRT0 as seed ortholog is 100%.

Group of orthologs #1465. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 T.nigroviridis:466

F7B0U3              	100.00%		H3CGF6              	100.00%
Bootstrap support for F7B0U3 as seed ortholog is 100%.
Bootstrap support for H3CGF6 as seed ortholog is 100%.

Group of orthologs #1466. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 T.nigroviridis:466

H2XY06              	100.00%		H3DBW9              	100.00%
Bootstrap support for H2XY06 as seed ortholog is 100%.
Bootstrap support for H3DBW9 as seed ortholog is 100%.

Group of orthologs #1467. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 T.nigroviridis:465

F6QF37              	100.00%		H3CZM5              	100.00%
                    	       		H3DHY0              	46.72%
                    	       		H3DJA4              	37.42%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for H3CZM5 as seed ortholog is 100%.

Group of orthologs #1468. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 T.nigroviridis:465

F7B065              	100.00%		H3CB12              	100.00%
                    	       		H3DF81              	100.00%
                    	       		H3D3C8              	18.09%
Bootstrap support for F7B065 as seed ortholog is 100%.
Bootstrap support for H3CB12 as seed ortholog is 100%.
Bootstrap support for H3DF81 as seed ortholog is 100%.

Group of orthologs #1469. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:337

F6TYX5              	100.00%		H3D599              	100.00%
                    	       		Q4RKV1              	58.96%
Bootstrap support for F6TYX5 as seed ortholog is 100%.
Bootstrap support for H3D599 as seed ortholog is 100%.

Group of orthologs #1470. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 T.nigroviridis:465

H2Y0B3              	100.00%		H3D5W9              	100.00%
                    	       		H3CFT8              	15.02%
Bootstrap support for H2Y0B3 as seed ortholog is 100%.
Bootstrap support for H3D5W9 as seed ortholog is 100%.

Group of orthologs #1471. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:321

F6RD19              	100.00%		H3CAH0              	100.00%
Bootstrap support for F6RD19 as seed ortholog is 100%.
Bootstrap support for H3CAH0 as seed ortholog is 100%.

Group of orthologs #1472. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 T.nigroviridis:465

F6TTJ7              	100.00%		H3C413              	100.00%
Bootstrap support for F6TTJ7 as seed ortholog is 100%.
Bootstrap support for H3C413 as seed ortholog is 100%.

Group of orthologs #1473. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 T.nigroviridis:465

F6Q0X6              	100.00%		H3CP31              	100.00%
Bootstrap support for F6Q0X6 as seed ortholog is 100%.
Bootstrap support for H3CP31 as seed ortholog is 100%.

Group of orthologs #1474. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:272

F6ZRR5              	100.00%		H3C520              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 100%.
Bootstrap support for H3C520 as seed ortholog is 100%.

Group of orthologs #1475. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 T.nigroviridis:465

F6QAT1              	100.00%		H3DK82              	100.00%
Bootstrap support for F6QAT1 as seed ortholog is 100%.
Bootstrap support for H3DK82 as seed ortholog is 100%.

Group of orthologs #1476. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 T.nigroviridis:226

F6VND6              	100.00%		H3D5N6              	100.00%
                    	       		H3DC59              	36.97%
                    	       		H3DLE1              	22.65%
Bootstrap support for F6VND6 as seed ortholog is 100%.
Bootstrap support for H3D5N6 as seed ortholog is 100%.

Group of orthologs #1477. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 T.nigroviridis:464

F6V318              	100.00%		H3CSK7              	100.00%
                    	       		H3CBW5              	8.97%
Bootstrap support for F6V318 as seed ortholog is 100%.
Bootstrap support for H3CSK7 as seed ortholog is 100%.

Group of orthologs #1478. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 T.nigroviridis:27

F6TM19              	100.00%		H3DH83              	100.00%
                    	       		H3CB42              	18.49%
Bootstrap support for F6TM19 as seed ortholog is 100%.
Bootstrap support for H3DH83 as seed ortholog is 61%.
Alternative seed ortholog is H3DGE7 (27 bits away from this cluster)

Group of orthologs #1479. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 T.nigroviridis:464

F6RA92              	100.00%		H3CB70              	100.00%
Bootstrap support for F6RA92 as seed ortholog is 100%.
Bootstrap support for H3CB70 as seed ortholog is 100%.

Group of orthologs #1480. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 T.nigroviridis:464

F6U5W6              	100.00%		H3D848              	100.00%
Bootstrap support for F6U5W6 as seed ortholog is 100%.
Bootstrap support for H3D848 as seed ortholog is 100%.

Group of orthologs #1481. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 T.nigroviridis:464

F6ZLM3              	100.00%		H3D0A0              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for H3D0A0 as seed ortholog is 100%.

Group of orthologs #1482. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 T.nigroviridis:180

F6YGN3              	100.00%		H3D955              	100.00%
Bootstrap support for F6YGN3 as seed ortholog is 100%.
Bootstrap support for H3D955 as seed ortholog is 100%.

Group of orthologs #1483. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:131

F7ATZ1              	100.00%		Q4T2N1              	100.00%
Bootstrap support for F7ATZ1 as seed ortholog is 100%.
Bootstrap support for Q4T2N1 as seed ortholog is 99%.

Group of orthologs #1484. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:197

F6WVW2              	100.00%		H3C0W4              	100.00%
                    	       		H3CKU0              	29.40%
                    	       		H3CPH1              	20.83%
                    	       		H3CCV7              	11.07%
Bootstrap support for F6WVW2 as seed ortholog is 100%.
Bootstrap support for H3C0W4 as seed ortholog is 99%.

Group of orthologs #1485. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:350

H2XS68              	100.00%		H3DL25              	100.00%
H2XK79              	100.00%		H3CXE8              	100.00%
Bootstrap support for H2XS68 as seed ortholog is 100%.
Bootstrap support for H2XK79 as seed ortholog is 99%.
Bootstrap support for H3DL25 as seed ortholog is 100%.
Bootstrap support for H3CXE8 as seed ortholog is 100%.

Group of orthologs #1486. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:463

F6RDE8              	100.00%		H3C8S7              	100.00%
Bootstrap support for F6RDE8 as seed ortholog is 100%.
Bootstrap support for H3C8S7 as seed ortholog is 100%.

Group of orthologs #1487. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:463

F6YEQ8              	100.00%		H3D0V1              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for H3D0V1 as seed ortholog is 100%.

Group of orthologs #1488. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:311

F6RZH2              	100.00%		Q4RSD5              	100.00%
Bootstrap support for F6RZH2 as seed ortholog is 100%.
Bootstrap support for Q4RSD5 as seed ortholog is 100%.

Group of orthologs #1489. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:463

F6VZF6              	100.00%		H3DFJ5              	100.00%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for H3DFJ5 as seed ortholog is 100%.

Group of orthologs #1490. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 T.nigroviridis:463

F7BEE9              	100.00%		H3DIA0              	100.00%
Bootstrap support for F7BEE9 as seed ortholog is 100%.
Bootstrap support for H3DIA0 as seed ortholog is 100%.

Group of orthologs #1491. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:354

F6ZTU7              	100.00%		H3DPC4              	100.00%
Bootstrap support for F6ZTU7 as seed ortholog is 100%.
Bootstrap support for H3DPC4 as seed ortholog is 100%.

Group of orthologs #1492. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 T.nigroviridis:66

H2XQN8              	100.00%		H3C0X7              	100.00%
Bootstrap support for H2XQN8 as seed ortholog is 100%.
Bootstrap support for H3C0X7 as seed ortholog is 95%.

Group of orthologs #1493. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 T.nigroviridis:462

F6XP34              	100.00%		H3D8S5              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for H3D8S5 as seed ortholog is 100%.

Group of orthologs #1494. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 T.nigroviridis:462

F6YHR6              	100.00%		H3D9B3              	100.00%
Bootstrap support for F6YHR6 as seed ortholog is 100%.
Bootstrap support for H3D9B3 as seed ortholog is 100%.

Group of orthologs #1495. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 T.nigroviridis:462

F7B7E9              	100.00%		H3DE80              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 100%.
Bootstrap support for H3DE80 as seed ortholog is 100%.

Group of orthologs #1496. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 T.nigroviridis:462

F6YH10              	100.00%		Q4RQ99              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for Q4RQ99 as seed ortholog is 100%.

Group of orthologs #1497. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:239

F6UUU5              	100.00%		H3DC31              	100.00%
                    	       		H3DLQ6              	61.11%
                    	       		H3DC32              	48.66%
                    	       		H3DEZ6              	47.13%
                    	       		H3CW27              	37.36%
                    	       		H3C2R4              	28.54%
                    	       		H3DLQ9              	25.10%
                    	       		H3CM69              	16.86%
Bootstrap support for F6UUU5 as seed ortholog is 98%.
Bootstrap support for H3DC31 as seed ortholog is 100%.

Group of orthologs #1498. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 T.nigroviridis:177

F6PUP9              	100.00%		Q4RJ43              	100.00%
F6Z4E6              	27.41%		
Bootstrap support for F6PUP9 as seed ortholog is 100%.
Bootstrap support for Q4RJ43 as seed ortholog is 99%.

Group of orthologs #1499. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 T.nigroviridis:461

F6U6T9              	100.00%		Q4SQ80              	100.00%
Bootstrap support for F6U6T9 as seed ortholog is 100%.
Bootstrap support for Q4SQ80 as seed ortholog is 100%.

Group of orthologs #1500. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 T.nigroviridis:359

F7BQ53              	100.00%		H3DD60              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for H3DD60 as seed ortholog is 100%.

Group of orthologs #1501. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:461

H2XYI9              	100.00%		H3D3V5              	100.00%
Bootstrap support for H2XYI9 as seed ortholog is 99%.
Bootstrap support for H3D3V5 as seed ortholog is 100%.

Group of orthologs #1502. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 T.nigroviridis:66

F6T3V6              	100.00%		H3CGM9              	100.00%
Bootstrap support for F6T3V6 as seed ortholog is 100%.
Bootstrap support for H3CGM9 as seed ortholog is 56%.
Alternative seed ortholog is H3D574 (66 bits away from this cluster)

Group of orthologs #1503. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 T.nigroviridis:460

F6WCU4              	100.00%		H3CY72              	100.00%
Bootstrap support for F6WCU4 as seed ortholog is 100%.
Bootstrap support for H3CY72 as seed ortholog is 100%.

Group of orthologs #1504. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 T.nigroviridis:460

F7A172              	100.00%		H3CND4              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for H3CND4 as seed ortholog is 100%.

Group of orthologs #1505. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 T.nigroviridis:460

F6RJV3              	100.00%		Q4SM39              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for Q4SM39 as seed ortholog is 100%.

Group of orthologs #1506. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:282

H2XSK6              	100.00%		H3CML7              	100.00%
Bootstrap support for H2XSK6 as seed ortholog is 100%.
Bootstrap support for H3CML7 as seed ortholog is 100%.

Group of orthologs #1507. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 T.nigroviridis:18

H2XYF8              	100.00%		H3CE98              	100.00%
Bootstrap support for H2XYF8 as seed ortholog is 100%.
Bootstrap support for H3CE98 as seed ortholog is 80%.

Group of orthologs #1508. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:460

H2XZC1              	100.00%		H3D3V8              	100.00%
Bootstrap support for H2XZC1 as seed ortholog is 100%.
Bootstrap support for H3D3V8 as seed ortholog is 100%.

Group of orthologs #1509. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 T.nigroviridis:460

H2XY03              	100.00%		H3DHP8              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 100%.
Bootstrap support for H3DHP8 as seed ortholog is 100%.

Group of orthologs #1510. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 T.nigroviridis:459

F6QE16              	100.00%		H3CWM3              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for H3CWM3 as seed ortholog is 100%.

Group of orthologs #1511. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 T.nigroviridis:459

F6PKT6              	100.00%		H3D945              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for H3D945 as seed ortholog is 100%.

Group of orthologs #1512. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 T.nigroviridis:459

H2XRS3              	100.00%		H3DN49              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for H3DN49 as seed ortholog is 100%.

Group of orthologs #1513. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 T.nigroviridis:337

H2XZV8              	100.00%		H3DD97              	100.00%
Bootstrap support for H2XZV8 as seed ortholog is 100%.
Bootstrap support for H3DD97 as seed ortholog is 100%.

Group of orthologs #1514. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:94

H2XLQ1              	100.00%		H3CVQ3              	100.00%
                    	       		H3DH96              	37.99%
                    	       		H3CZK5              	12.53%
                    	       		H3CN95              	11.70%
                    	       		H3DKA8              	8.51%
                    	       		H3CVQ2              	7.84%
Bootstrap support for H2XLQ1 as seed ortholog is 99%.
Bootstrap support for H3CVQ3 as seed ortholog is 95%.

Group of orthologs #1515. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:402

F6PK80              	100.00%		H3CC58              	100.00%
Bootstrap support for F6PK80 as seed ortholog is 100%.
Bootstrap support for H3CC58 as seed ortholog is 100%.

Group of orthologs #1516. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 T.nigroviridis:458

F6S0E6              	100.00%		H3CBL3              	100.00%
Bootstrap support for F6S0E6 as seed ortholog is 100%.
Bootstrap support for H3CBL3 as seed ortholog is 100%.

Group of orthologs #1517. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:184

F6W1D2              	100.00%		H3CGI6              	100.00%
Bootstrap support for F6W1D2 as seed ortholog is 100%.
Bootstrap support for H3CGI6 as seed ortholog is 99%.

Group of orthologs #1518. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 T.nigroviridis:229

F6VNW9              	100.00%		H3CI25              	100.00%
Bootstrap support for F6VNW9 as seed ortholog is 100%.
Bootstrap support for H3CI25 as seed ortholog is 100%.

Group of orthologs #1519. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 T.nigroviridis:214

F6PGY3              	100.00%		H3D552              	100.00%
Bootstrap support for F6PGY3 as seed ortholog is 100%.
Bootstrap support for H3D552 as seed ortholog is 100%.

Group of orthologs #1520. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 T.nigroviridis:43

F7ALM5              	100.00%		H3CHU3              	100.00%
Bootstrap support for F7ALM5 as seed ortholog is 100%.
Bootstrap support for H3CHU3 as seed ortholog is 87%.

Group of orthologs #1521. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 T.nigroviridis:349

F7A801              	100.00%		H3DGM0              	100.00%
Bootstrap support for F7A801 as seed ortholog is 100%.
Bootstrap support for H3DGM0 as seed ortholog is 100%.

Group of orthologs #1522. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:321

F6RS86              	100.00%		H3CNU3              	100.00%
F7ARF4              	44.07%		
Bootstrap support for F6RS86 as seed ortholog is 99%.
Bootstrap support for H3CNU3 as seed ortholog is 100%.

Group of orthologs #1523. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 T.nigroviridis:457

F6X9G1              	100.00%		H3CAN5              	100.00%
Bootstrap support for F6X9G1 as seed ortholog is 100%.
Bootstrap support for H3CAN5 as seed ortholog is 100%.

Group of orthologs #1524. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 T.nigroviridis:49

F7BDV2              	100.00%		H3C5N0              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for H3C5N0 as seed ortholog is 96%.

Group of orthologs #1525. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 T.nigroviridis:392

F6SSU2              	100.00%		H3DBY0              	100.00%
Bootstrap support for F6SSU2 as seed ortholog is 100%.
Bootstrap support for H3DBY0 as seed ortholog is 100%.

Group of orthologs #1526. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 T.nigroviridis:456

F7BQ44              	100.00%		H3D584              	100.00%
                    	       		H3DIQ7              	35.94%
                    	       		H3D4M2              	28.25%
Bootstrap support for F7BQ44 as seed ortholog is 100%.
Bootstrap support for H3D584 as seed ortholog is 100%.

Group of orthologs #1527. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 T.nigroviridis:456

F6U315              	100.00%		H3DC14              	100.00%
                    	       		H3CHL9              	17.13%
Bootstrap support for F6U315 as seed ortholog is 100%.
Bootstrap support for H3DC14 as seed ortholog is 100%.

Group of orthologs #1528. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 T.nigroviridis:456

F6SYW5              	100.00%		H3CJ22              	100.00%
Bootstrap support for F6SYW5 as seed ortholog is 100%.
Bootstrap support for H3CJ22 as seed ortholog is 100%.

Group of orthologs #1529. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:342

F6PW34              	100.00%		H3DHW0              	100.00%
Bootstrap support for F6PW34 as seed ortholog is 100%.
Bootstrap support for H3DHW0 as seed ortholog is 100%.

Group of orthologs #1530. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 T.nigroviridis:456

H2Y123              	100.00%		Q4RQZ5              	100.00%
Bootstrap support for H2Y123 as seed ortholog is 100%.
Bootstrap support for Q4RQZ5 as seed ortholog is 100%.

Group of orthologs #1531. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 T.nigroviridis:455

F6VFM3              	100.00%		H3BWG6              	100.00%
                    	       		H3CCM8              	40.41%
                    	       		H3BY41              	35.39%
Bootstrap support for F6VFM3 as seed ortholog is 100%.
Bootstrap support for H3BWG6 as seed ortholog is 100%.

Group of orthologs #1532. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:455

F6SSX2              	100.00%		H3CFA4              	100.00%
Bootstrap support for F6SSX2 as seed ortholog is 100%.
Bootstrap support for H3CFA4 as seed ortholog is 100%.

Group of orthologs #1533. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 T.nigroviridis:455

F6Q8G4              	100.00%		H3CNU8              	100.00%
Bootstrap support for F6Q8G4 as seed ortholog is 100%.
Bootstrap support for H3CNU8 as seed ortholog is 100%.

Group of orthologs #1534. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 T.nigroviridis:324

F6V055              	100.00%		H3CCB7              	100.00%
Bootstrap support for F6V055 as seed ortholog is 100%.
Bootstrap support for H3CCB7 as seed ortholog is 100%.

Group of orthologs #1535. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 T.nigroviridis:374

F6QDG1              	100.00%		H3DBB6              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for H3DBB6 as seed ortholog is 100%.

Group of orthologs #1536. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 T.nigroviridis:455

F6YUA5              	100.00%		H3DLV0              	100.00%
Bootstrap support for F6YUA5 as seed ortholog is 100%.
Bootstrap support for H3DLV0 as seed ortholog is 100%.

Group of orthologs #1537. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 T.nigroviridis:455

F7A2G6              	100.00%		H3DIG4              	100.00%
Bootstrap support for F7A2G6 as seed ortholog is 62%.
Alternative seed ortholog is H2XP90 (10 bits away from this cluster)
Bootstrap support for H3DIG4 as seed ortholog is 100%.

Group of orthologs #1538. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:131

F6YEL1              	100.00%		H3C4E3              	100.00%
                    	       		H3CQY6              	31.95%
                    	       		H3CG09              	29.47%
Bootstrap support for F6YEL1 as seed ortholog is 99%.
Bootstrap support for H3C4E3 as seed ortholog is 96%.

Group of orthologs #1539. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:454

F6UZS7              	100.00%		H3CZ52              	100.00%
                    	       		H3D4X4              	24.40%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for H3CZ52 as seed ortholog is 100%.

Group of orthologs #1540. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:454

F6UB18              	100.00%		H3C3R0              	100.00%
Bootstrap support for F6UB18 as seed ortholog is 100%.
Bootstrap support for H3C3R0 as seed ortholog is 100%.

Group of orthologs #1541. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:454

F6UH30              	100.00%		H3CN45              	100.00%
Bootstrap support for F6UH30 as seed ortholog is 100%.
Bootstrap support for H3CN45 as seed ortholog is 100%.

Group of orthologs #1542. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:391

F6TFD0              	100.00%		H3D5U2              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for H3D5U2 as seed ortholog is 100%.

Group of orthologs #1543. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:454

F6ZF56              	100.00%		H3CQ14              	100.00%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for H3CQ14 as seed ortholog is 100%.

Group of orthologs #1544. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:454

F6XHE4              	100.00%		H3CX66              	100.00%
Bootstrap support for F6XHE4 as seed ortholog is 100%.
Bootstrap support for H3CX66 as seed ortholog is 100%.

Group of orthologs #1545. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 T.nigroviridis:454

F6UUV9              	100.00%		H3DG66              	100.00%
Bootstrap support for F6UUV9 as seed ortholog is 100%.
Bootstrap support for H3DG66 as seed ortholog is 100%.

Group of orthologs #1546. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:206

H2XXD3              	100.00%		H3DAH2              	100.00%
Bootstrap support for H2XXD3 as seed ortholog is 100%.
Bootstrap support for H3DAH2 as seed ortholog is 100%.

Group of orthologs #1547. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:277

F6PJL7              	100.00%		H3CNR5              	100.00%
                    	       		H3CPA9              	12.77%
Bootstrap support for F6PJL7 as seed ortholog is 100%.
Bootstrap support for H3CNR5 as seed ortholog is 100%.

Group of orthologs #1548. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 T.nigroviridis:453

F7ACM5              	100.00%		H3CNC7              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for H3CNC7 as seed ortholog is 100%.

Group of orthologs #1549. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:30

F6YLI3              	100.00%		H3DES5              	100.00%
Bootstrap support for F6YLI3 as seed ortholog is 99%.
Bootstrap support for H3DES5 as seed ortholog is 74%.
Alternative seed ortholog is H3D8F4 (30 bits away from this cluster)

Group of orthologs #1550. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 T.nigroviridis:453

H2XVI6              	100.00%		H3D7Q0              	100.00%
Bootstrap support for H2XVI6 as seed ortholog is 100%.
Bootstrap support for H3D7Q0 as seed ortholog is 100%.

Group of orthologs #1551. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:348

F6XB39              	100.00%		H3D7N5              	100.00%
                    	       		H3CX81              	21.11%
Bootstrap support for F6XB39 as seed ortholog is 100%.
Bootstrap support for H3D7N5 as seed ortholog is 100%.

Group of orthologs #1552. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:283

H2XWJ0              	100.00%		H3D6Y7              	100.00%
                    	       		H3DHH3              	25.36%
Bootstrap support for H2XWJ0 as seed ortholog is 100%.
Bootstrap support for H3D6Y7 as seed ortholog is 100%.

Group of orthologs #1553. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 T.nigroviridis:452

F6WK69              	100.00%		H3D5L2              	100.00%
Bootstrap support for F6WK69 as seed ortholog is 100%.
Bootstrap support for H3D5L2 as seed ortholog is 100%.

Group of orthologs #1554. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:451

F6ZRT4              	100.00%		H3CAA8              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 99%.
Bootstrap support for H3CAA8 as seed ortholog is 100%.

Group of orthologs #1555. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 T.nigroviridis:451

F7AI93              	100.00%		H3C896              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for H3C896 as seed ortholog is 100%.

Group of orthologs #1556. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 T.nigroviridis:451

F7AAC1              	100.00%		H3DN63              	100.00%
Bootstrap support for F7AAC1 as seed ortholog is 100%.
Bootstrap support for H3DN63 as seed ortholog is 100%.

Group of orthologs #1557. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 T.nigroviridis:451

H2XYW0              	100.00%		H3D3I6              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for H3D3I6 as seed ortholog is 100%.

Group of orthologs #1558. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:143

F6WTG3              	100.00%		H3CRK2              	100.00%
                    	       		H3CZA9              	23.92%
Bootstrap support for F6WTG3 as seed ortholog is 100%.
Bootstrap support for H3CRK2 as seed ortholog is 99%.

Group of orthologs #1559. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 T.nigroviridis:450

F6ZY58              	100.00%		H3DDJ2              	100.00%
                    	       		H3C2U5              	13.64%
Bootstrap support for F6ZY58 as seed ortholog is 100%.
Bootstrap support for H3DDJ2 as seed ortholog is 100%.

Group of orthologs #1560. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 T.nigroviridis:450

F6Z7E0              	100.00%		H3CA30              	100.00%
Bootstrap support for F6Z7E0 as seed ortholog is 100%.
Bootstrap support for H3CA30 as seed ortholog is 100%.

Group of orthologs #1561. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:373

F6SP32              	100.00%		H3DB83              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for H3DB83 as seed ortholog is 100%.

Group of orthologs #1562. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 T.nigroviridis:450

F7B330              	100.00%		H3CVP0              	100.00%
Bootstrap support for F7B330 as seed ortholog is 100%.
Bootstrap support for H3CVP0 as seed ortholog is 100%.

Group of orthologs #1563. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 T.nigroviridis:361

F6YRS8              	100.00%		H3DLZ9              	100.00%
Bootstrap support for F6YRS8 as seed ortholog is 100%.
Bootstrap support for H3DLZ9 as seed ortholog is 100%.

Group of orthologs #1564. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:268

F6VRW9              	100.00%		Q4T4U0              	100.00%
                    	       		H3C3X7              	15.96%
                    	       		H3D4J2              	8.41%
Bootstrap support for F6VRW9 as seed ortholog is 100%.
Bootstrap support for Q4T4U0 as seed ortholog is 100%.

Group of orthologs #1565. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:66

H2XY01              	100.00%		H3DFD1              	100.00%
                    	       		H3DA62              	50.47%
                    	       		Q4RYN6              	18.01%
Bootstrap support for H2XY01 as seed ortholog is 100%.
Bootstrap support for H3DFD1 as seed ortholog is 96%.

Group of orthologs #1566. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 T.nigroviridis:449

F6Z6L1              	100.00%		H3CH53              	100.00%
                    	       		H3D503              	9.50%
Bootstrap support for F6Z6L1 as seed ortholog is 100%.
Bootstrap support for H3CH53 as seed ortholog is 100%.

Group of orthologs #1567. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 T.nigroviridis:449

F6VT08              	100.00%		H3CXD2              	100.00%
                    	       		H3CG31              	55.89%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for H3CXD2 as seed ortholog is 100%.

Group of orthologs #1568. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 T.nigroviridis:449

F6QE47              	100.00%		H3CDN4              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for H3CDN4 as seed ortholog is 100%.

Group of orthologs #1569. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 T.nigroviridis:449

H2XTB6              	100.00%		H3D684              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for H3D684 as seed ortholog is 100%.

Group of orthologs #1570. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 T.nigroviridis:449

H2XM50              	100.00%		H3DIX7              	100.00%
Bootstrap support for H2XM50 as seed ortholog is 92%.
Bootstrap support for H3DIX7 as seed ortholog is 100%.

Group of orthologs #1571. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:149

F6YD53              	100.00%		H3CXF3              	100.00%
                    	       		H3DBE6              	23.12%
                    	       		H3C9W4              	9.75%
Bootstrap support for F6YD53 as seed ortholog is 100%.
Bootstrap support for H3CXF3 as seed ortholog is 100%.

Group of orthologs #1572. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F6Y9G9              	100.00%		H3D4F6              	100.00%
F7ADG5              	52.26%		
Bootstrap support for F6Y9G9 as seed ortholog is 100%.
Bootstrap support for H3D4F6 as seed ortholog is 100%.

Group of orthologs #1573. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:101

H2Y0H5              	100.00%		H3CE79              	100.00%
F6V8V5              	9.09%		
Bootstrap support for H2Y0H5 as seed ortholog is 100%.
Bootstrap support for H3CE79 as seed ortholog is 99%.

Group of orthologs #1574. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:114

F6X3V2              	100.00%		Q4RSN7              	100.00%
                    	       		H3CSQ9              	19.23%
Bootstrap support for F6X3V2 as seed ortholog is 100%.
Bootstrap support for Q4RSN7 as seed ortholog is 96%.

Group of orthologs #1575. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F6PKL1              	100.00%		H3C3I4              	100.00%
Bootstrap support for F6PKL1 as seed ortholog is 100%.
Bootstrap support for H3C3I4 as seed ortholog is 100%.

Group of orthologs #1576. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F6PMY2              	100.00%		H3CGI8              	100.00%
Bootstrap support for F6PMY2 as seed ortholog is 100%.
Bootstrap support for H3CGI8 as seed ortholog is 100%.

Group of orthologs #1577. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F6T7M7              	100.00%		H3CSS6              	100.00%
Bootstrap support for F6T7M7 as seed ortholog is 100%.
Bootstrap support for H3CSS6 as seed ortholog is 100%.

Group of orthologs #1578. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 T.nigroviridis:312

F7ANS1              	100.00%		H3C6U3              	100.00%
Bootstrap support for F7ANS1 as seed ortholog is 95%.
Bootstrap support for H3C6U3 as seed ortholog is 100%.

Group of orthologs #1579. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F6YM78              	100.00%		H3CKU4              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for H3CKU4 as seed ortholog is 100%.

Group of orthologs #1580. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F7AB27              	100.00%		H3CTQ8              	100.00%
Bootstrap support for F7AB27 as seed ortholog is 100%.
Bootstrap support for H3CTQ8 as seed ortholog is 100%.

Group of orthologs #1581. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:448

F6TLX8              	100.00%		H3DHX2              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for H3DHX2 as seed ortholog is 100%.

Group of orthologs #1582. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:448

F6UF46              	100.00%		Q4S1G6              	100.00%
Bootstrap support for F6UF46 as seed ortholog is 95%.
Bootstrap support for Q4S1G6 as seed ortholog is 100%.

Group of orthologs #1583. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 T.nigroviridis:79

H2XNY7              	100.00%		Q4SQA7              	100.00%
Bootstrap support for H2XNY7 as seed ortholog is 100%.
Bootstrap support for Q4SQA7 as seed ortholog is 100%.

Group of orthologs #1584. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 T.nigroviridis:447

F6QIL3              	100.00%		H3CFE8              	100.00%
                    	       		Q4RHF6              	27.08%
                    	       		H3CE35              	16.15%
                    	       		H3CM41              	13.78%
Bootstrap support for F6QIL3 as seed ortholog is 100%.
Bootstrap support for H3CFE8 as seed ortholog is 100%.

Group of orthologs #1585. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 T.nigroviridis:447

F6XVD3              	100.00%		H3C499              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for H3C499 as seed ortholog is 100%.

Group of orthologs #1586. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 T.nigroviridis:291

Q4H3F3              	100.00%		H3CZ15              	100.00%
Bootstrap support for Q4H3F3 as seed ortholog is 100%.
Bootstrap support for H3CZ15 as seed ortholog is 100%.

Group of orthologs #1587. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 T.nigroviridis:446

F7B8H6              	100.00%		H3CKY4              	100.00%
F6TEA7              	50.37%		
Bootstrap support for F7B8H6 as seed ortholog is 100%.
Bootstrap support for H3CKY4 as seed ortholog is 100%.

Group of orthologs #1588. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 T.nigroviridis:446

F6RNB7              	100.00%		H3D163              	100.00%
Bootstrap support for F6RNB7 as seed ortholog is 100%.
Bootstrap support for H3D163 as seed ortholog is 100%.

Group of orthologs #1589. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 T.nigroviridis:446

F6U602              	100.00%		H3D4C4              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for H3D4C4 as seed ortholog is 100%.

Group of orthologs #1590. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 T.nigroviridis:446

F6Q512              	100.00%		H3DGH0              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for H3DGH0 as seed ortholog is 100%.

Group of orthologs #1591. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:325

Q4H383              	100.00%		H3CSM8              	100.00%
                    	       		H3CC53              	7.08%
Bootstrap support for Q4H383 as seed ortholog is 100%.
Bootstrap support for H3CSM8 as seed ortholog is 100%.

Group of orthologs #1592. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 T.nigroviridis:61

F6Q7A6              	100.00%		H3D914              	100.00%
Bootstrap support for F6Q7A6 as seed ortholog is 100%.
Bootstrap support for H3D914 as seed ortholog is 92%.

Group of orthologs #1593. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 T.nigroviridis:445

H2XPV2              	100.00%		H3D1P9              	100.00%
Bootstrap support for H2XPV2 as seed ortholog is 100%.
Bootstrap support for H3D1P9 as seed ortholog is 100%.

Group of orthologs #1594. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:93

F6Z9D3              	100.00%		H3DF06              	100.00%
                    	       		H3DB73              	36.71%
Bootstrap support for F6Z9D3 as seed ortholog is 100%.
Bootstrap support for H3DF06 as seed ortholog is 99%.

Group of orthologs #1595. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:202

F6QXU2              	100.00%		H3D8W4              	100.00%
Bootstrap support for F6QXU2 as seed ortholog is 99%.
Bootstrap support for H3D8W4 as seed ortholog is 99%.

Group of orthologs #1596. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 T.nigroviridis:444

F6ZS66              	100.00%		H3D853              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 100%.
Bootstrap support for H3D853 as seed ortholog is 100%.

Group of orthologs #1597. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:443

F6SSP8              	100.00%		H3D076              	100.00%
                    	       		H3DHB4              	9.89%
Bootstrap support for F6SSP8 as seed ortholog is 100%.
Bootstrap support for H3D076 as seed ortholog is 100%.

Group of orthologs #1598. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:82

F7AX33              	100.00%		H3CVG2              	100.00%
                    	       		H3C8V9              	8.05%
Bootstrap support for F7AX33 as seed ortholog is 100%.
Bootstrap support for H3CVG2 as seed ortholog is 98%.

Group of orthologs #1599. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:443

F6UZR0              	100.00%		H3CC44              	100.00%
Bootstrap support for F6UZR0 as seed ortholog is 100%.
Bootstrap support for H3CC44 as seed ortholog is 100%.

Group of orthologs #1600. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:298

F7AKB5              	100.00%		H3C048              	100.00%
Bootstrap support for F7AKB5 as seed ortholog is 100%.
Bootstrap support for H3C048 as seed ortholog is 100%.

Group of orthologs #1601. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:443

F6TJV9              	100.00%		H3DJU8              	100.00%
Bootstrap support for F6TJV9 as seed ortholog is 100%.
Bootstrap support for H3DJU8 as seed ortholog is 100%.

Group of orthologs #1602. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:136

F6YG66              	100.00%		H3D6J7              	100.00%
Bootstrap support for F6YG66 as seed ortholog is 99%.
Bootstrap support for H3D6J7 as seed ortholog is 99%.

Group of orthologs #1603. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:443

F7AL38              	100.00%		H3DIM5              	100.00%
Bootstrap support for F7AL38 as seed ortholog is 100%.
Bootstrap support for H3DIM5 as seed ortholog is 100%.

Group of orthologs #1604. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:443

F7B623              	100.00%		H3DJW7              	100.00%
Bootstrap support for F7B623 as seed ortholog is 100%.
Bootstrap support for H3DJW7 as seed ortholog is 100%.

Group of orthologs #1605. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 T.nigroviridis:443

H2XWE4              	100.00%		H3DKX6              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for H3DKX6 as seed ortholog is 100%.

Group of orthologs #1606. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 T.nigroviridis:442

F7ALL8              	100.00%		H3CC85              	100.00%
                    	       		H3DJ77              	13.49%
Bootstrap support for F7ALL8 as seed ortholog is 100%.
Bootstrap support for H3CC85 as seed ortholog is 100%.

Group of orthologs #1607. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 T.nigroviridis:442

F6ULQ2              	100.00%		H3DK33              	100.00%
                    	       		H3D103              	56.82%
Bootstrap support for F6ULQ2 as seed ortholog is 100%.
Bootstrap support for H3DK33 as seed ortholog is 100%.

Group of orthologs #1608. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:381

F6W7N8              	100.00%		H3CVK0              	100.00%
Bootstrap support for F6W7N8 as seed ortholog is 100%.
Bootstrap support for H3CVK0 as seed ortholog is 100%.

Group of orthologs #1609. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:341

H2Y3K9              	100.00%		H3CAM1              	100.00%
Bootstrap support for H2Y3K9 as seed ortholog is 100%.
Bootstrap support for H3CAM1 as seed ortholog is 100%.

Group of orthologs #1610. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:116

H2XZV4              	100.00%		H3CXZ5              	100.00%
Bootstrap support for H2XZV4 as seed ortholog is 100%.
Bootstrap support for H3CXZ5 as seed ortholog is 99%.

Group of orthologs #1611. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 T.nigroviridis:52

F6TLX0              	100.00%		H3DHE5              	100.00%
                    	       		H3CUA6              	10.60%
                    	       		H3DJV9              	10.32%
                    	       		H3D590              	7.60%
Bootstrap support for F6TLX0 as seed ortholog is 100%.
Bootstrap support for H3DHE5 as seed ortholog is 91%.

Group of orthologs #1612. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:206

F6TIY7              	100.00%		H3DF04              	100.00%
                    	       		H3CP21              	55.83%
Bootstrap support for F6TIY7 as seed ortholog is 100%.
Bootstrap support for H3DF04 as seed ortholog is 98%.

Group of orthologs #1613. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:213

F6PKF9              	100.00%		H3BWE9              	100.00%
Bootstrap support for F6PKF9 as seed ortholog is 100%.
Bootstrap support for H3BWE9 as seed ortholog is 100%.

Group of orthologs #1614. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:325

F6Z188              	100.00%		H3CDP0              	100.00%
Bootstrap support for F6Z188 as seed ortholog is 100%.
Bootstrap support for H3CDP0 as seed ortholog is 100%.

Group of orthologs #1615. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 T.nigroviridis:441

F6YP95              	100.00%		H3CQ70              	100.00%
Bootstrap support for F6YP95 as seed ortholog is 100%.
Bootstrap support for H3CQ70 as seed ortholog is 100%.

Group of orthologs #1616. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 T.nigroviridis:441

F6W318              	100.00%		H3DAK7              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for H3DAK7 as seed ortholog is 100%.

Group of orthologs #1617. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 T.nigroviridis:441

H2XT24              	100.00%		H3D6Q6              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for H3D6Q6 as seed ortholog is 100%.

Group of orthologs #1618. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:292

F6RRI2              	100.00%		H3CPM5              	100.00%
                    	       		H3CWL1              	100.00%
Bootstrap support for F6RRI2 as seed ortholog is 100%.
Bootstrap support for H3CPM5 as seed ortholog is 100%.
Bootstrap support for H3CWL1 as seed ortholog is 100%.

Group of orthologs #1619. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:255

F7ACA9              	100.00%		H3D5M0              	100.00%
                    	       		H3C8C1              	23.39%
Bootstrap support for F7ACA9 as seed ortholog is 100%.
Bootstrap support for H3D5M0 as seed ortholog is 100%.

Group of orthologs #1620. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 T.nigroviridis:440

F6R3M6              	100.00%		H3CNS3              	100.00%
Bootstrap support for F6R3M6 as seed ortholog is 100%.
Bootstrap support for H3CNS3 as seed ortholog is 100%.

Group of orthologs #1621. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 T.nigroviridis:440

F6VEU2              	100.00%		H3CAJ2              	100.00%
Bootstrap support for F6VEU2 as seed ortholog is 100%.
Bootstrap support for H3CAJ2 as seed ortholog is 100%.

Group of orthologs #1622. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 T.nigroviridis:440

F6Q5D4              	100.00%		H3DM02              	100.00%
Bootstrap support for F6Q5D4 as seed ortholog is 100%.
Bootstrap support for H3DM02 as seed ortholog is 100%.

Group of orthologs #1623. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 T.nigroviridis:103

F6WYI2              	100.00%		H3D639              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 100%.
Bootstrap support for H3D639 as seed ortholog is 99%.

Group of orthologs #1624. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 T.nigroviridis:440

H2XR49              	100.00%		H3D704              	100.00%
Bootstrap support for H2XR49 as seed ortholog is 100%.
Bootstrap support for H3D704 as seed ortholog is 100%.

Group of orthologs #1625. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 T.nigroviridis:287

F6S4S1              	100.00%		H3CMC2              	100.00%
                    	       		H3CXS9              	24.19%
Bootstrap support for F6S4S1 as seed ortholog is 100%.
Bootstrap support for H3CMC2 as seed ortholog is 100%.

Group of orthologs #1626. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 T.nigroviridis:439

F7AXB1              	100.00%		H3CZU8              	100.00%
                    	       		H3CHH5              	12.55%
Bootstrap support for F7AXB1 as seed ortholog is 100%.
Bootstrap support for H3CZU8 as seed ortholog is 100%.

Group of orthologs #1627. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 T.nigroviridis:439

H2XMC6              	100.00%		H3CVA7              	100.00%
Bootstrap support for H2XMC6 as seed ortholog is 100%.
Bootstrap support for H3CVA7 as seed ortholog is 100%.

Group of orthologs #1628. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 T.nigroviridis:439

F6YTX7              	100.00%		Q4SG97              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for Q4SG97 as seed ortholog is 100%.

Group of orthologs #1629. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 T.nigroviridis:329

H2Y2U9              	100.00%		H3CYI9              	100.00%
Bootstrap support for H2Y2U9 as seed ortholog is 100%.
Bootstrap support for H3CYI9 as seed ortholog is 100%.

Group of orthologs #1630. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 T.nigroviridis:439

H2XTB4              	100.00%		H3DKU3              	100.00%
Bootstrap support for H2XTB4 as seed ortholog is 100%.
Bootstrap support for H3DKU3 as seed ortholog is 100%.

Group of orthologs #1631. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 T.nigroviridis:438

F7BA39              	100.00%		H3DBQ0              	100.00%
                    	       		H3DDG8              	7.15%
Bootstrap support for F7BA39 as seed ortholog is 100%.
Bootstrap support for H3DBQ0 as seed ortholog is 100%.

Group of orthologs #1632. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 T.nigroviridis:168

F6YHC8              	100.00%		H3CUU8              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for H3CUU8 as seed ortholog is 99%.

Group of orthologs #1633. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 T.nigroviridis:438

F6WBA4              	100.00%		H3D2G0              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for H3D2G0 as seed ortholog is 100%.

Group of orthologs #1634. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:394

F6S9Y0              	100.00%		H3DHM0              	100.00%
Bootstrap support for F6S9Y0 as seed ortholog is 99%.
Bootstrap support for H3DHM0 as seed ortholog is 100%.

Group of orthologs #1635. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 T.nigroviridis:438

F6ZTX9              	100.00%		H3CY54              	100.00%
Bootstrap support for F6ZTX9 as seed ortholog is 100%.
Bootstrap support for H3CY54 as seed ortholog is 100%.

Group of orthologs #1636. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:339

F7BJ92              	100.00%		H3D9D6              	100.00%
Bootstrap support for F7BJ92 as seed ortholog is 99%.
Bootstrap support for H3D9D6 as seed ortholog is 100%.

Group of orthologs #1637. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 T.nigroviridis:437

F6V6R4              	100.00%		H3C6T4              	100.00%
                    	       		H3C7W4              	17.29%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for H3C6T4 as seed ortholog is 100%.

Group of orthologs #1638. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 T.nigroviridis:262

F6YUL2              	100.00%		H3CEI7              	100.00%
                    	       		H3CNI4              	15.24%
Bootstrap support for F6YUL2 as seed ortholog is 100%.
Bootstrap support for H3CEI7 as seed ortholog is 100%.

Group of orthologs #1639. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 T.nigroviridis:437

F7BP62              	100.00%		H3CBZ8              	100.00%
Bootstrap support for F7BP62 as seed ortholog is 100%.
Bootstrap support for H3CBZ8 as seed ortholog is 100%.

Group of orthologs #1640. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 T.nigroviridis:437

F6X600              	100.00%		H3DJR1              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for H3DJR1 as seed ortholog is 100%.

Group of orthologs #1641. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:131

F6YCW2              	100.00%		H3C5B9              	100.00%
F6V0N3              	62.72%		H3DNL7              	19.38%
Bootstrap support for F6YCW2 as seed ortholog is 100%.
Bootstrap support for H3C5B9 as seed ortholog is 99%.

Group of orthologs #1642. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

F6U8A8              	100.00%		H3CG66              	100.00%
                    	       		H3D8V9              	12.94%
Bootstrap support for F6U8A8 as seed ortholog is 100%.
Bootstrap support for H3CG66 as seed ortholog is 100%.

Group of orthologs #1643. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

H2XNK3              	100.00%		H3C2J0              	100.00%
                    	       		H3DEG3              	18.50%
Bootstrap support for H2XNK3 as seed ortholog is 100%.
Bootstrap support for H3C2J0 as seed ortholog is 100%.

Group of orthologs #1644. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:389

F6Q643              	100.00%		H3DEB6              	100.00%
                    	       		H3D588              	17.63%
Bootstrap support for F6Q643 as seed ortholog is 100%.
Bootstrap support for H3DEB6 as seed ortholog is 100%.

Group of orthologs #1645. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:203

H2XRB5              	100.00%		H3CZB0              	100.00%
F6U8G8              	9.72%		
Bootstrap support for H2XRB5 as seed ortholog is 100%.
Bootstrap support for H3CZB0 as seed ortholog is 99%.

Group of orthologs #1646. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

F6Q096              	100.00%		H3CI86              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for H3CI86 as seed ortholog is 100%.

Group of orthologs #1647. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

F6TWQ7              	100.00%		H3CRV8              	100.00%
Bootstrap support for F6TWQ7 as seed ortholog is 100%.
Bootstrap support for H3CRV8 as seed ortholog is 100%.

Group of orthologs #1648. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

F7BDH7              	100.00%		H3CSR4              	100.00%
Bootstrap support for F7BDH7 as seed ortholog is 100%.
Bootstrap support for H3CSR4 as seed ortholog is 100%.

Group of orthologs #1649. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

F7BQA9              	100.00%		H3DJW4              	100.00%
Bootstrap support for F7BQA9 as seed ortholog is 100%.
Bootstrap support for H3DJW4 as seed ortholog is 100%.

Group of orthologs #1650. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 T.nigroviridis:436

H2Y005              	100.00%		H3D4S6              	100.00%
Bootstrap support for H2Y005 as seed ortholog is 100%.
Bootstrap support for H3D4S6 as seed ortholog is 100%.

Group of orthologs #1651. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 T.nigroviridis:435

F6XEV8              	100.00%		H3CYT8              	100.00%
                    	       		H3C919              	14.29%
Bootstrap support for F6XEV8 as seed ortholog is 100%.
Bootstrap support for H3CYT8 as seed ortholog is 100%.

Group of orthologs #1652. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 T.nigroviridis:435

F7BHN6              	100.00%		H3CVQ6              	100.00%
                    	       		H3DLI3              	14.45%
Bootstrap support for F7BHN6 as seed ortholog is 100%.
Bootstrap support for H3CVQ6 as seed ortholog is 100%.

Group of orthologs #1653. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:297

F6X3X4              	100.00%		H3CBK7              	100.00%
Bootstrap support for F6X3X4 as seed ortholog is 100%.
Bootstrap support for H3CBK7 as seed ortholog is 100%.

Group of orthologs #1654. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 T.nigroviridis:316

F6YEH2              	100.00%		H3DF19              	100.00%
                    	       		H3D4S0              	24.34%
Bootstrap support for F6YEH2 as seed ortholog is 100%.
Bootstrap support for H3DF19 as seed ortholog is 100%.

Group of orthologs #1655. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 T.nigroviridis:373

H2XQC1              	100.00%		H3DH61              	100.00%
                    	       		H3CW14              	14.59%
Bootstrap support for H2XQC1 as seed ortholog is 100%.
Bootstrap support for H3DH61 as seed ortholog is 100%.

Group of orthologs #1656. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:52

F6PP23              	100.00%		H3CN84              	100.00%
Bootstrap support for F6PP23 as seed ortholog is 100%.
Bootstrap support for H3CN84 as seed ortholog is 87%.

Group of orthologs #1657. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 T.nigroviridis:433

F6ZHM4              	100.00%		H3CLU2              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for H3CLU2 as seed ortholog is 100%.

Group of orthologs #1658. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 T.nigroviridis:433

F6QAQ0              	100.00%		H3DJU0              	100.00%
Bootstrap support for F6QAQ0 as seed ortholog is 100%.
Bootstrap support for H3DJU0 as seed ortholog is 100%.

Group of orthologs #1659. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 T.nigroviridis:433

F6YG27              	100.00%		H3D5P9              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for H3D5P9 as seed ortholog is 100%.

Group of orthologs #1660. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 T.nigroviridis:157

F7BDF6              	100.00%		H3C6M0              	100.00%
                    	       		H3DIW1              	10.25%
Bootstrap support for F7BDF6 as seed ortholog is 100%.
Bootstrap support for H3C6M0 as seed ortholog is 99%.

Group of orthologs #1661. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 T.nigroviridis:271

F6ZGR3              	100.00%		H3C9Y4              	100.00%
Bootstrap support for F6ZGR3 as seed ortholog is 100%.
Bootstrap support for H3C9Y4 as seed ortholog is 100%.

Group of orthologs #1662. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 T.nigroviridis:432

F6R5Z4              	100.00%		H3D2J7              	100.00%
Bootstrap support for F6R5Z4 as seed ortholog is 100%.
Bootstrap support for H3D2J7 as seed ortholog is 100%.

Group of orthologs #1663. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 T.nigroviridis:432

H2XLN7              	100.00%		H3CIW3              	100.00%
Bootstrap support for H2XLN7 as seed ortholog is 100%.
Bootstrap support for H3CIW3 as seed ortholog is 100%.

Group of orthologs #1664. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:314

F7AFR6              	100.00%		H3CWJ7              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 100%.
Bootstrap support for H3CWJ7 as seed ortholog is 100%.

Group of orthologs #1665. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:243

Q1RLF0              	100.00%		H3DFM7              	100.00%
Bootstrap support for Q1RLF0 as seed ortholog is 100%.
Bootstrap support for H3DFM7 as seed ortholog is 100%.

Group of orthologs #1666. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 T.nigroviridis:287

F6SZ94              	100.00%		H3CBK3              	100.00%
Bootstrap support for F6SZ94 as seed ortholog is 100%.
Bootstrap support for H3CBK3 as seed ortholog is 100%.

Group of orthologs #1667. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:431

F6VP14              	100.00%		H3CBI5              	100.00%
Bootstrap support for F6VP14 as seed ortholog is 100%.
Bootstrap support for H3CBI5 as seed ortholog is 100%.

Group of orthologs #1668. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 T.nigroviridis:431

F6PJU1              	100.00%		H3D6C9              	100.00%
Bootstrap support for F6PJU1 as seed ortholog is 100%.
Bootstrap support for H3D6C9 as seed ortholog is 100%.

Group of orthologs #1669. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:259

F6XBY1              	100.00%		H3D7Q2              	100.00%
Bootstrap support for F6XBY1 as seed ortholog is 100%.
Bootstrap support for H3D7Q2 as seed ortholog is 100%.

Group of orthologs #1670. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 T.nigroviridis:431

F6VUN5              	100.00%		H3DJZ8              	100.00%
Bootstrap support for F6VUN5 as seed ortholog is 100%.
Bootstrap support for H3DJZ8 as seed ortholog is 100%.

Group of orthologs #1671. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 T.nigroviridis:430

F6U4Y0              	100.00%		H3CVI6              	100.00%
                    	       		H3D6P4              	38.08%
Bootstrap support for F6U4Y0 as seed ortholog is 100%.
Bootstrap support for H3CVI6 as seed ortholog is 100%.

Group of orthologs #1672. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 T.nigroviridis:200

F6Q6E0              	100.00%		H3CYY8              	100.00%
Bootstrap support for F6Q6E0 as seed ortholog is 65%.
Alternative seed ortholog is F6WXB6 (15 bits away from this cluster)
Bootstrap support for H3CYY8 as seed ortholog is 99%.

Group of orthologs #1673. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 T.nigroviridis:108

F6Q2J9              	100.00%		H3D0P4              	100.00%
Bootstrap support for F6Q2J9 as seed ortholog is 100%.
Bootstrap support for H3D0P4 as seed ortholog is 97%.

Group of orthologs #1674. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 T.nigroviridis:430

H2XPX9              	100.00%		H3D7R7              	100.00%
Bootstrap support for H2XPX9 as seed ortholog is 100%.
Bootstrap support for H3D7R7 as seed ortholog is 100%.

Group of orthologs #1675. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:429

F6U959              	100.00%		H3CGA0              	100.00%
                    	       		H3C3P5              	15.19%
                    	       		H3CS10              	13.13%
Bootstrap support for F6U959 as seed ortholog is 100%.
Bootstrap support for H3CGA0 as seed ortholog is 100%.

Group of orthologs #1676. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:429

F6TD07              	100.00%		H3CCA8              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for H3CCA8 as seed ortholog is 100%.

Group of orthologs #1677. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:92

F6REQ0              	100.00%		H3CUJ7              	100.00%
Bootstrap support for F6REQ0 as seed ortholog is 100%.
Bootstrap support for H3CUJ7 as seed ortholog is 98%.

Group of orthologs #1678. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:429

F6VW40              	100.00%		H3D267              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for H3D267 as seed ortholog is 100%.

Group of orthologs #1679. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:429

F6RRX9              	100.00%		H3DPL8              	100.00%
Bootstrap support for F6RRX9 as seed ortholog is 100%.
Bootstrap support for H3DPL8 as seed ortholog is 100%.

Group of orthologs #1680. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:429

H2Y2K2              	100.00%		H3CAD5              	100.00%
Bootstrap support for H2Y2K2 as seed ortholog is 100%.
Bootstrap support for H3CAD5 as seed ortholog is 100%.

Group of orthologs #1681. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:345

F7BJM0              	100.00%		H3DEK4              	100.00%
Bootstrap support for F7BJM0 as seed ortholog is 100%.
Bootstrap support for H3DEK4 as seed ortholog is 100%.

Group of orthologs #1682. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 T.nigroviridis:429

Q1RL29              	100.00%		H3DG37              	100.00%
Bootstrap support for Q1RL29 as seed ortholog is 100%.
Bootstrap support for H3DG37 as seed ortholog is 100%.

Group of orthologs #1683. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:44

F6TA22              	100.00%		H3CJR0              	100.00%
                    	       		H3C7X7              	25.12%
                    	       		Q4T7D3              	12.80%
                    	       		H3DAV1              	11.67%
                    	       		H3BYP6              	8.10%
Bootstrap support for F6TA22 as seed ortholog is 94%.
Bootstrap support for H3CJR0 as seed ortholog is 82%.

Group of orthologs #1684. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:199

F6WYW5              	100.00%		H3CYG0              	100.00%
                    	       		H3CG96              	9.06%
Bootstrap support for F6WYW5 as seed ortholog is 100%.
Bootstrap support for H3CYG0 as seed ortholog is 99%.

Group of orthologs #1685. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:379

F6PNT4              	100.00%		H3DB38              	100.00%
Bootstrap support for F6PNT4 as seed ortholog is 99%.
Bootstrap support for H3DB38 as seed ortholog is 100%.

Group of orthologs #1686. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 T.nigroviridis:428

F6T0X5              	100.00%		H3DHP5              	100.00%
Bootstrap support for F6T0X5 as seed ortholog is 100%.
Bootstrap support for H3DHP5 as seed ortholog is 100%.

Group of orthologs #1687. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 T.nigroviridis:428

F6YHB0              	100.00%		H3DDX5              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for H3DDX5 as seed ortholog is 100%.

Group of orthologs #1688. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 T.nigroviridis:428

F6Z2W9              	100.00%		Q4SQA8              	100.00%
Bootstrap support for F6Z2W9 as seed ortholog is 100%.
Bootstrap support for Q4SQA8 as seed ortholog is 100%.

Group of orthologs #1689. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:173

L7N0R8              	100.00%		H3DR92              	100.00%
Bootstrap support for L7N0R8 as seed ortholog is 100%.
Bootstrap support for H3DR92 as seed ortholog is 99%.

Group of orthologs #1690. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 T.nigroviridis:241

F6YGL5              	100.00%		H3CM63              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 100%.
Bootstrap support for H3CM63 as seed ortholog is 100%.

Group of orthologs #1691. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:190

F7BFE1              	100.00%		H3DKJ8              	100.00%
                    	       		H3CPF2              	61.07%
                    	       		H3CYH7              	53.13%
                    	       		H3D4V3              	25.30%
                    	       		H3DPF0              	20.45%
                    	       		H3DAV7              	19.82%
                    	       		H3D3Y4              	14.20%
                    	       		H3C0U3              	13.56%
Bootstrap support for F7BFE1 as seed ortholog is 81%.
Bootstrap support for H3DKJ8 as seed ortholog is 99%.

Group of orthologs #1692. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 T.nigroviridis:426

F6WVH2              	100.00%		H3CSR6              	100.00%
F6Q6W6              	41.24%		
Bootstrap support for F6WVH2 as seed ortholog is 100%.
Bootstrap support for H3CSR6 as seed ortholog is 100%.

Group of orthologs #1693. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:260

F6S0X0              	100.00%		H3CKK3              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 100%.
Bootstrap support for H3CKK3 as seed ortholog is 100%.

Group of orthologs #1694. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 T.nigroviridis:56

H2XLH6              	100.00%		H3D2B2              	100.00%
Bootstrap support for H2XLH6 as seed ortholog is 99%.
Bootstrap support for H3D2B2 as seed ortholog is 93%.

Group of orthologs #1695. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F6UCU4              	100.00%		Q4RR77              	100.00%
                    	       		H3DHN2              	14.16%
                    	       		H3BW64              	12.39%
Bootstrap support for F6UCU4 as seed ortholog is 100%.
Bootstrap support for Q4RR77 as seed ortholog is 100%.

Group of orthologs #1696. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:425

F6Z015              	100.00%		H3CTD7              	100.00%
                    	       		H3DKZ7              	11.66%
Bootstrap support for F6Z015 as seed ortholog is 71%.
Alternative seed ortholog is H2XV50 (32 bits away from this cluster)
Bootstrap support for H3CTD7 as seed ortholog is 100%.

Group of orthologs #1697. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F6YD02              	100.00%		Q4SD49              	100.00%
                    	       		H3CZP8              	10.53%
Bootstrap support for F6YD02 as seed ortholog is 100%.
Bootstrap support for Q4SD49 as seed ortholog is 100%.

Group of orthologs #1698. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F6W350              	100.00%		H3CZ23              	100.00%
Bootstrap support for F6W350 as seed ortholog is 100%.
Bootstrap support for H3CZ23 as seed ortholog is 100%.

Group of orthologs #1699. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F6VDW8              	100.00%		H3D1G2              	100.00%
Bootstrap support for F6VDW8 as seed ortholog is 100%.
Bootstrap support for H3D1G2 as seed ortholog is 100%.

Group of orthologs #1700. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F6XMM6              	100.00%		H3CW06              	100.00%
Bootstrap support for F6XMM6 as seed ortholog is 100%.
Bootstrap support for H3CW06 as seed ortholog is 100%.

Group of orthologs #1701. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F6XQV0              	100.00%		H3D499              	100.00%
Bootstrap support for F6XQV0 as seed ortholog is 100%.
Bootstrap support for H3D499 as seed ortholog is 100%.

Group of orthologs #1702. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

F7B568              	100.00%		H3D1I9              	100.00%
Bootstrap support for F7B568 as seed ortholog is 100%.
Bootstrap support for H3D1I9 as seed ortholog is 100%.

Group of orthologs #1703. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 T.nigroviridis:425

Q1RPZ2              	100.00%		H3DCY8              	100.00%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for H3DCY8 as seed ortholog is 100%.

Group of orthologs #1704. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:342

F6QMU4              	100.00%		H3DDG2              	100.00%
                    	       		H3D167              	63.00%
                    	       		H3DMJ8              	55.96%
                    	       		H3DRE0              	12.54%
Bootstrap support for F6QMU4 as seed ortholog is 100%.
Bootstrap support for H3DDG2 as seed ortholog is 100%.

Group of orthologs #1705. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 T.nigroviridis:424

F6QHD2              	100.00%		H3C251              	100.00%
Bootstrap support for F6QHD2 as seed ortholog is 100%.
Bootstrap support for H3C251 as seed ortholog is 100%.

Group of orthologs #1706. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:423

F6YFM8              	100.00%		H3CLY6              	100.00%
                    	       		H3CT24              	6.76%
Bootstrap support for F6YFM8 as seed ortholog is 100%.
Bootstrap support for H3CLY6 as seed ortholog is 100%.

Group of orthologs #1707. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:216

F6TQT4              	100.00%		H3DIF4              	100.00%
                    	       		H3D4X1              	43.65%
Bootstrap support for F6TQT4 as seed ortholog is 100%.
Bootstrap support for H3DIF4 as seed ortholog is 100%.

Group of orthologs #1708. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:423

F6PI67              	100.00%		H3CS48              	100.00%
Bootstrap support for F6PI67 as seed ortholog is 100%.
Bootstrap support for H3CS48 as seed ortholog is 100%.

Group of orthologs #1709. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:423

F6UJ45              	100.00%		H3CGJ9              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 100%.
Bootstrap support for H3CGJ9 as seed ortholog is 100%.

Group of orthologs #1710. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:423

F6YN96              	100.00%		H3CBJ4              	100.00%
Bootstrap support for F6YN96 as seed ortholog is 100%.
Bootstrap support for H3CBJ4 as seed ortholog is 100%.

Group of orthologs #1711. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:423

F6TMB1              	100.00%		H3CZ22              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for H3CZ22 as seed ortholog is 100%.

Group of orthologs #1712. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:423

H2XSD2              	100.00%		H3BZH3              	100.00%
Bootstrap support for H2XSD2 as seed ortholog is 100%.
Bootstrap support for H3BZH3 as seed ortholog is 100%.

Group of orthologs #1713. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:263

F6T0J5              	100.00%		H3DCN4              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for H3DCN4 as seed ortholog is 100%.

Group of orthologs #1714. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:307

F6Z8G0              	100.00%		H3CX90              	100.00%
Bootstrap support for F6Z8G0 as seed ortholog is 100%.
Bootstrap support for H3CX90 as seed ortholog is 100%.

Group of orthologs #1715. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 T.nigroviridis:423

F7A1S8              	100.00%		H3DHL2              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for H3DHL2 as seed ortholog is 100%.

Group of orthologs #1716. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 T.nigroviridis:324

F6ZU35              	100.00%		H3C0Y8              	100.00%
Bootstrap support for F6ZU35 as seed ortholog is 100%.
Bootstrap support for H3C0Y8 as seed ortholog is 100%.

Group of orthologs #1717. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 T.nigroviridis:421

F6VDV2              	100.00%		H3D0U3              	100.00%
                    	       		H3CDE9              	41.25%
Bootstrap support for F6VDV2 as seed ortholog is 100%.
Bootstrap support for H3D0U3 as seed ortholog is 100%.

Group of orthologs #1718. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:333

F6TDN1              	100.00%		H3CEA0              	100.00%
Bootstrap support for F6TDN1 as seed ortholog is 100%.
Bootstrap support for H3CEA0 as seed ortholog is 100%.

Group of orthologs #1719. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:281

F6Q9M9              	100.00%		H3D906              	100.00%
Bootstrap support for F6Q9M9 as seed ortholog is 100%.
Bootstrap support for H3D906 as seed ortholog is 100%.

Group of orthologs #1720. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 T.nigroviridis:421

F6ZJF3              	100.00%		H3CYY6              	100.00%
Bootstrap support for F6ZJF3 as seed ortholog is 100%.
Bootstrap support for H3CYY6 as seed ortholog is 100%.

Group of orthologs #1721. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 T.nigroviridis:421

H2XRD9              	100.00%		H3CKX8              	100.00%
Bootstrap support for H2XRD9 as seed ortholog is 100%.
Bootstrap support for H3CKX8 as seed ortholog is 100%.

Group of orthologs #1722. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 T.nigroviridis:421

H2XUV6              	100.00%		H3DI24              	100.00%
Bootstrap support for H2XUV6 as seed ortholog is 100%.
Bootstrap support for H3DI24 as seed ortholog is 100%.

Group of orthologs #1723. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 T.nigroviridis:170

F6TEZ1              	100.00%		Q4RBH0              	100.00%
                    	       		Q4RBG9              	41.03%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for Q4RBH0 as seed ortholog is 100%.

Group of orthologs #1724. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:420

F6PPC0              	100.00%		H3CK57              	100.00%
Bootstrap support for F6PPC0 as seed ortholog is 100%.
Bootstrap support for H3CK57 as seed ortholog is 100%.

Group of orthologs #1725. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 T.nigroviridis:420

F6TGX7              	100.00%		H3CGK0              	100.00%
Bootstrap support for F6TGX7 as seed ortholog is 100%.
Bootstrap support for H3CGK0 as seed ortholog is 100%.

Group of orthologs #1726. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 T.nigroviridis:420

F6VCG5              	100.00%		H3CHE8              	100.00%
Bootstrap support for F6VCG5 as seed ortholog is 100%.
Bootstrap support for H3CHE8 as seed ortholog is 100%.

Group of orthologs #1727. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:420

F6WRI9              	100.00%		H3CGU7              	100.00%
Bootstrap support for F6WRI9 as seed ortholog is 100%.
Bootstrap support for H3CGU7 as seed ortholog is 100%.

Group of orthologs #1728. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:73

F6YRW6              	100.00%		H3DCG5              	100.00%
Bootstrap support for F6YRW6 as seed ortholog is 99%.
Bootstrap support for H3DCG5 as seed ortholog is 98%.

Group of orthologs #1729. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 T.nigroviridis:229

H2XPD1              	100.00%		H3DER2              	100.00%
Bootstrap support for H2XPD1 as seed ortholog is 100%.
Bootstrap support for H3DER2 as seed ortholog is 100%.

Group of orthologs #1730. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 T.nigroviridis:419

F6TZ34              	100.00%		Q4SJX5              	100.00%
                    	       		H3CTC7              	40.61%
Bootstrap support for F6TZ34 as seed ortholog is 100%.
Bootstrap support for Q4SJX5 as seed ortholog is 100%.

Group of orthologs #1731. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 T.nigroviridis:419

F6QB35              	100.00%		H3CQC8              	100.00%
Bootstrap support for F6QB35 as seed ortholog is 100%.
Bootstrap support for H3CQC8 as seed ortholog is 100%.

Group of orthologs #1732. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 T.nigroviridis:419

F6X7W0              	100.00%		H3DCA0              	100.00%
Bootstrap support for F6X7W0 as seed ortholog is 100%.
Bootstrap support for H3DCA0 as seed ortholog is 100%.

Group of orthologs #1733. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:179

H2Y1T5              	100.00%		H3DJ58              	100.00%
                    	       		H3DG04              	68.72%
                    	       		H3DK17              	49.38%
                    	       		H3CZM7              	17.28%
Bootstrap support for H2Y1T5 as seed ortholog is 100%.
Bootstrap support for H3DJ58 as seed ortholog is 99%.

Group of orthologs #1734. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 T.nigroviridis:418

F6TJS2              	100.00%		H3D105              	100.00%
Bootstrap support for F6TJS2 as seed ortholog is 100%.
Bootstrap support for H3D105 as seed ortholog is 100%.

Group of orthologs #1735. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 T.nigroviridis:418

F7AUL7              	100.00%		H3CGH5              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for H3CGH5 as seed ortholog is 100%.

Group of orthologs #1736. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 T.nigroviridis:418

F7AEV2              	100.00%		H3CSB5              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for H3CSB5 as seed ortholog is 100%.

Group of orthologs #1737. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 T.nigroviridis:171

Q1RLE3              	100.00%		H3BWD9              	100.00%
Bootstrap support for Q1RLE3 as seed ortholog is 100%.
Bootstrap support for H3BWD9 as seed ortholog is 99%.

Group of orthologs #1738. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:180

F7APJ4              	100.00%		H3DKN3              	100.00%
                    	       		H3DF13              	37.33%
Bootstrap support for F7APJ4 as seed ortholog is 100%.
Bootstrap support for H3DKN3 as seed ortholog is 100%.

Group of orthologs #1739. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 T.nigroviridis:417

F6XVH7              	100.00%		H3CHN3              	100.00%
Bootstrap support for F6XVH7 as seed ortholog is 100%.
Bootstrap support for H3CHN3 as seed ortholog is 100%.

Group of orthologs #1740. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 T.nigroviridis:186

Q6XZ10              	100.00%		H3D622              	100.00%
Q6XZ09              	74.69%		Q3BBX8              	95.83%
                    	       		H3CWJ0              	25.20%
                    	       		Q3BBX7              	23.41%
                    	       		H3CEY0              	14.48%
Bootstrap support for Q6XZ10 as seed ortholog is 80%.
Bootstrap support for H3D622 as seed ortholog is 99%.

Group of orthologs #1741. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:416

F6TV83              	100.00%		H3CH80              	100.00%
                    	       		H3CXH8              	28.57%
                    	       		H3DL74              	20.31%
                    	       		H3DMJ5              	7.22%
Bootstrap support for F6TV83 as seed ortholog is 99%.
Bootstrap support for H3CH80 as seed ortholog is 100%.

Group of orthologs #1742. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:192

F6WDR9              	100.00%		H3DBM1              	100.00%
                    	       		H3DIF9              	100.00%
Bootstrap support for F6WDR9 as seed ortholog is 100%.
Bootstrap support for H3DBM1 as seed ortholog is 99%.
Bootstrap support for H3DIF9 as seed ortholog is 99%.

Group of orthologs #1743. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 T.nigroviridis:416

H2Y2E8              	100.00%		H3CE70              	100.00%
                    	       		H3D1H3              	21.81%
Bootstrap support for H2Y2E8 as seed ortholog is 100%.
Bootstrap support for H3CE70 as seed ortholog is 100%.

Group of orthologs #1744. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:337

F6RKQ2              	100.00%		H3D9P1              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for H3D9P1 as seed ortholog is 100%.

Group of orthologs #1745. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 T.nigroviridis:416

F6XSG2              	100.00%		H3D1A1              	100.00%
Bootstrap support for F6XSG2 as seed ortholog is 100%.
Bootstrap support for H3D1A1 as seed ortholog is 100%.

Group of orthologs #1746. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:209

F6UEG1              	100.00%		H3D976              	100.00%
Bootstrap support for F6UEG1 as seed ortholog is 88%.
Bootstrap support for H3D976 as seed ortholog is 100%.

Group of orthologs #1747. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 T.nigroviridis:414

F6PJM3              	100.00%		H3DEW1              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 100%.
Bootstrap support for H3DEW1 as seed ortholog is 100%.

Group of orthologs #1748. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:51

F7A0P0              	100.00%		H3CNL6              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for H3CNL6 as seed ortholog is 97%.

Group of orthologs #1749. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 T.nigroviridis:308

H2XQR8              	100.00%		H3CTL6              	100.00%
Bootstrap support for H2XQR8 as seed ortholog is 100%.
Bootstrap support for H3CTL6 as seed ortholog is 100%.

Group of orthologs #1750. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:358

H2XK82              	100.00%		H3DQZ0              	100.00%
Bootstrap support for H2XK82 as seed ortholog is 100%.
Bootstrap support for H3DQZ0 as seed ortholog is 100%.

Group of orthologs #1751. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

F6X9B1              	100.00%		H3C8F9              	100.00%
                    	       		H3DJ75              	16.06%
Bootstrap support for F6X9B1 as seed ortholog is 100%.
Bootstrap support for H3C8F9 as seed ortholog is 100%.

Group of orthologs #1752. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:153

B1H3L8              	100.00%		H3BWA6              	100.00%
Bootstrap support for B1H3L8 as seed ortholog is 99%.
Bootstrap support for H3BWA6 as seed ortholog is 99%.

Group of orthologs #1753. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

F6Z7S0              	100.00%		H3BYW9              	100.00%
Bootstrap support for F6Z7S0 as seed ortholog is 100%.
Bootstrap support for H3BYW9 as seed ortholog is 100%.

Group of orthologs #1754. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:413

F6WF51              	100.00%		H3CCK3              	100.00%
Bootstrap support for F6WF51 as seed ortholog is 79%.
Bootstrap support for H3CCK3 as seed ortholog is 100%.

Group of orthologs #1755. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:362

F6U9X5              	100.00%		H3CPX6              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for H3CPX6 as seed ortholog is 100%.

Group of orthologs #1756. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

F6UJF1              	100.00%		H3CRN3              	100.00%
Bootstrap support for F6UJF1 as seed ortholog is 100%.
Bootstrap support for H3CRN3 as seed ortholog is 100%.

Group of orthologs #1757. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

F6TU49              	100.00%		H3CZC8              	100.00%
Bootstrap support for F6TU49 as seed ortholog is 100%.
Bootstrap support for H3CZC8 as seed ortholog is 100%.

Group of orthologs #1758. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

F6SHZ7              	100.00%		H3DAY9              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for H3DAY9 as seed ortholog is 100%.

Group of orthologs #1759. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

H2Y3Q6              	100.00%		H3CHM0              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for H3CHM0 as seed ortholog is 100%.

Group of orthologs #1760. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 T.nigroviridis:413

F7BDS3              	100.00%		H3DK03              	100.00%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for H3DK03 as seed ortholog is 100%.

Group of orthologs #1761. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 T.nigroviridis:412

F6SGZ6              	100.00%		H3D980              	100.00%
                    	       		H3DBJ8              	14.18%
Bootstrap support for F6SGZ6 as seed ortholog is 100%.
Bootstrap support for H3D980 as seed ortholog is 100%.

Group of orthologs #1762. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 T.nigroviridis:412

F7A9G9              	100.00%		H3DLA4              	100.00%
                    	       		H3CTG3              	44.69%
Bootstrap support for F7A9G9 as seed ortholog is 100%.
Bootstrap support for H3DLA4 as seed ortholog is 100%.

Group of orthologs #1763. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:412

F6QDT9              	100.00%		H3DMV1              	100.00%
Bootstrap support for F6QDT9 as seed ortholog is 100%.
Bootstrap support for H3DMV1 as seed ortholog is 100%.

Group of orthologs #1764. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:412

Q4H352              	100.00%		H3C1Y8              	100.00%
Bootstrap support for Q4H352 as seed ortholog is 100%.
Bootstrap support for H3C1Y8 as seed ortholog is 100%.

Group of orthologs #1765. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 T.nigroviridis:412

F6W170              	100.00%		H3DKS7              	100.00%
Bootstrap support for F6W170 as seed ortholog is 100%.
Bootstrap support for H3DKS7 as seed ortholog is 100%.

Group of orthologs #1766. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:411

H2XVU4              	100.00%		H3CEA2              	100.00%
H2XSC1              	13.95%		
H2XZ95              	11.73%		
H2XP11              	10.74%		
Bootstrap support for H2XVU4 as seed ortholog is 100%.
Bootstrap support for H3CEA2 as seed ortholog is 100%.

Group of orthologs #1767. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:343

F6Z5P6              	100.00%		H3CVV0              	100.00%
F6ZTZ7              	64.03%		
Bootstrap support for F6Z5P6 as seed ortholog is 100%.
Bootstrap support for H3CVV0 as seed ortholog is 100%.

Group of orthologs #1768. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:332

F6YVQ9              	100.00%		H3DDB9              	100.00%
                    	       		H3CZQ5              	17.90%
Bootstrap support for F6YVQ9 as seed ortholog is 100%.
Bootstrap support for H3DDB9 as seed ortholog is 100%.

Group of orthologs #1769. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:411

F6YUB3              	100.00%		H3CR30              	100.00%
Bootstrap support for F6YUB3 as seed ortholog is 100%.
Bootstrap support for H3CR30 as seed ortholog is 100%.

Group of orthologs #1770. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:411

F6WZ68              	100.00%		H3DLD4              	100.00%
Bootstrap support for F6WZ68 as seed ortholog is 100%.
Bootstrap support for H3DLD4 as seed ortholog is 100%.

Group of orthologs #1771. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 T.nigroviridis:411

F7ATT1              	100.00%		Q4SDY0              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for Q4SDY0 as seed ortholog is 100%.

Group of orthologs #1772. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:334

F6Q909              	100.00%		H3C0A6              	100.00%
                    	       		H3DMI8              	20.05%
                    	       		H3C733              	17.81%
Bootstrap support for F6Q909 as seed ortholog is 100%.
Bootstrap support for H3C0A6 as seed ortholog is 100%.

Group of orthologs #1773. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 T.nigroviridis:410

F6SQQ1              	100.00%		H3CAX9              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for H3CAX9 as seed ortholog is 100%.

Group of orthologs #1774. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:315

F6VEB2              	100.00%		H3CFC5              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for H3CFC5 as seed ortholog is 100%.

Group of orthologs #1775. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 T.nigroviridis:410

F6UJM5              	100.00%		H3DDN7              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for H3DDN7 as seed ortholog is 100%.

Group of orthologs #1776. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 T.nigroviridis:410

F6WHI9              	100.00%		H3D7U8              	100.00%
Bootstrap support for F6WHI9 as seed ortholog is 100%.
Bootstrap support for H3D7U8 as seed ortholog is 100%.

Group of orthologs #1777. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 T.nigroviridis:410

H2Y1J2              	100.00%		H3CGL0              	100.00%
Bootstrap support for H2Y1J2 as seed ortholog is 100%.
Bootstrap support for H3CGL0 as seed ortholog is 100%.

Group of orthologs #1778. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 T.nigroviridis:410

F6ZIS0              	100.00%		H3DPY6              	100.00%
Bootstrap support for F6ZIS0 as seed ortholog is 100%.
Bootstrap support for H3DPY6 as seed ortholog is 100%.

Group of orthologs #1779. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:409

F6UXC7              	100.00%		H3DMM5              	100.00%
                    	       		H3D5Y1              	14.80%
Bootstrap support for F6UXC7 as seed ortholog is 100%.
Bootstrap support for H3DMM5 as seed ortholog is 100%.

Group of orthologs #1780. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:133

Q9U6V0              	100.00%		H3DC17              	100.00%
                    	       		H3DMN4              	47.34%
Bootstrap support for Q9U6V0 as seed ortholog is 100%.
Bootstrap support for H3DC17 as seed ortholog is 99%.

Group of orthologs #1781. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:409

F6R1B9              	100.00%		H3CML2              	100.00%
Bootstrap support for F6R1B9 as seed ortholog is 100%.
Bootstrap support for H3CML2 as seed ortholog is 100%.

Group of orthologs #1782. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:266

F6SIX8              	100.00%		H3CRN2              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for H3CRN2 as seed ortholog is 100%.

Group of orthologs #1783. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:358

F6UP66              	100.00%		H3CN66              	100.00%
Bootstrap support for F6UP66 as seed ortholog is 100%.
Bootstrap support for H3CN66 as seed ortholog is 100%.

Group of orthologs #1784. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:104

F6VYK8              	100.00%		H3CKM9              	100.00%
Bootstrap support for F6VYK8 as seed ortholog is 100%.
Bootstrap support for H3CKM9 as seed ortholog is 96%.

Group of orthologs #1785. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:143

F6UUI8              	100.00%		H3DH79              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for H3DH79 as seed ortholog is 99%.

Group of orthologs #1786. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:258

F6TS86              	100.00%		H3DLY0              	100.00%
Bootstrap support for F6TS86 as seed ortholog is 99%.
Bootstrap support for H3DLY0 as seed ortholog is 100%.

Group of orthologs #1787. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:409

F6TLL4              	100.00%		Q4RVM5              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for Q4RVM5 as seed ortholog is 100%.

Group of orthologs #1788. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 T.nigroviridis:409

F6ZCS4              	100.00%		H3DBH6              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for H3DBH6 as seed ortholog is 100%.

Group of orthologs #1789. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:281

H2XR98              	100.00%		H3CZJ2              	100.00%
Bootstrap support for H2XR98 as seed ortholog is 100%.
Bootstrap support for H3CZJ2 as seed ortholog is 100%.

Group of orthologs #1790. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:408

F6QSJ0              	100.00%		H3D160              	100.00%
                    	       		H3DMM2              	10.69%
Bootstrap support for F6QSJ0 as seed ortholog is 100%.
Bootstrap support for H3D160 as seed ortholog is 100%.

Group of orthologs #1791. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:408

F6WYV6              	100.00%		H3CWN2              	100.00%
                    	       		H3CFI6              	22.22%
Bootstrap support for F6WYV6 as seed ortholog is 100%.
Bootstrap support for H3CWN2 as seed ortholog is 100%.

Group of orthologs #1792. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 T.nigroviridis:408

F6XKA8              	100.00%		H3D6K7              	100.00%
                    	       		H3DGK8              	43.24%
Bootstrap support for F6XKA8 as seed ortholog is 100%.
Bootstrap support for H3D6K7 as seed ortholog is 100%.

Group of orthologs #1793. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:246

F6TXZ8              	100.00%		Q4SK83              	100.00%
                    	       		H3DEW4              	33.64%
Bootstrap support for F6TXZ8 as seed ortholog is 100%.
Bootstrap support for Q4SK83 as seed ortholog is 100%.

Group of orthologs #1794. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:408

F6TAR1              	100.00%		H3C7Z5              	100.00%
Bootstrap support for F6TAR1 as seed ortholog is 100%.
Bootstrap support for H3C7Z5 as seed ortholog is 100%.

Group of orthologs #1795. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:408

F6SSK4              	100.00%		H3CDP1              	100.00%
Bootstrap support for F6SSK4 as seed ortholog is 100%.
Bootstrap support for H3CDP1 as seed ortholog is 100%.

Group of orthologs #1796. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:408

F6WJV4              	100.00%		H3CA71              	100.00%
Bootstrap support for F6WJV4 as seed ortholog is 100%.
Bootstrap support for H3CA71 as seed ortholog is 100%.

Group of orthologs #1797. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:351

F6TIU3              	100.00%		H3CV53              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 100%.
Bootstrap support for H3CV53 as seed ortholog is 100%.

Group of orthologs #1798. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:271

F6U222              	100.00%		H3CZP4              	100.00%
Bootstrap support for F6U222 as seed ortholog is 100%.
Bootstrap support for H3CZP4 as seed ortholog is 100%.

Group of orthologs #1799. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:159

F6ZSR8              	100.00%		H3CTV9              	100.00%
Bootstrap support for F6ZSR8 as seed ortholog is 100%.
Bootstrap support for H3CTV9 as seed ortholog is 100%.

Group of orthologs #1800. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 T.nigroviridis:408

F7AE51              	100.00%		H3DQC2              	100.00%
Bootstrap support for F7AE51 as seed ortholog is 100%.
Bootstrap support for H3DQC2 as seed ortholog is 100%.

Group of orthologs #1801. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 T.nigroviridis:407

F6R4Z1              	100.00%		H3CKE5              	100.00%
                    	       		H3D717              	55.02%
Bootstrap support for F6R4Z1 as seed ortholog is 100%.
Bootstrap support for H3CKE5 as seed ortholog is 100%.

Group of orthologs #1802. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:320

F6T7Q1              	100.00%		H3DNK3              	100.00%
                    	       		H3DBV2              	24.08%
Bootstrap support for F6T7Q1 as seed ortholog is 100%.
Bootstrap support for H3DNK3 as seed ortholog is 100%.

Group of orthologs #1803. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:220

F6PTJ9              	100.00%		H3CEA7              	100.00%
Bootstrap support for F6PTJ9 as seed ortholog is 90%.
Bootstrap support for H3CEA7 as seed ortholog is 61%.
Alternative seed ortholog is Q4SPI2 (220 bits away from this cluster)

Group of orthologs #1804. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:111

F6RD62              	100.00%		H3CS75              	100.00%
Bootstrap support for F6RD62 as seed ortholog is 99%.
Bootstrap support for H3CS75 as seed ortholog is 99%.

Group of orthologs #1805. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 T.nigroviridis:407

F6Z910              	100.00%		H3DMJ0              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for H3DMJ0 as seed ortholog is 100%.

Group of orthologs #1806. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:407

F7ATS3              	100.00%		H3DKH0              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for H3DKH0 as seed ortholog is 100%.

Group of orthologs #1807. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 T.nigroviridis:407

H2XU61              	100.00%		H3DG40              	100.00%
Bootstrap support for H2XU61 as seed ortholog is 100%.
Bootstrap support for H3DG40 as seed ortholog is 100%.

Group of orthologs #1808. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:406

F6T9L2              	100.00%		H3CPI3              	100.00%
                    	       		H3DKS5              	19.76%
Bootstrap support for F6T9L2 as seed ortholog is 100%.
Bootstrap support for H3CPI3 as seed ortholog is 100%.

Group of orthologs #1809. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:179

F7BKM3              	100.00%		H3CTU3              	100.00%
                    	       		H3CQK0              	31.98%
Bootstrap support for F7BKM3 as seed ortholog is 100%.
Bootstrap support for H3CTU3 as seed ortholog is 99%.

Group of orthologs #1810. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 T.nigroviridis:406

F6ZNA8              	100.00%		H3D899              	100.00%
                    	       		H3CTQ9              	7.12%
Bootstrap support for F6ZNA8 as seed ortholog is 100%.
Bootstrap support for H3D899 as seed ortholog is 100%.

Group of orthologs #1811. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:406

F6ZX12              	100.00%		H3DAZ4              	100.00%
                    	       		Q4SCA9              	53.37%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for H3DAZ4 as seed ortholog is 100%.

Group of orthologs #1812. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:406

F6S360              	100.00%		H3BYZ1              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for H3BYZ1 as seed ortholog is 100%.

Group of orthologs #1813. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:406

F6UA87              	100.00%		H3CJN9              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for H3CJN9 as seed ortholog is 100%.

Group of orthologs #1814. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:406

F6RTW0              	100.00%		H3CY04              	100.00%
Bootstrap support for F6RTW0 as seed ortholog is 100%.
Bootstrap support for H3CY04 as seed ortholog is 100%.

Group of orthologs #1815. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 T.nigroviridis:406

F6VLB7              	100.00%		H3DFM0              	100.00%
Bootstrap support for F6VLB7 as seed ortholog is 100%.
Bootstrap support for H3DFM0 as seed ortholog is 100%.

Group of orthologs #1816. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F6Q427              	100.00%		H3CJK6              	100.00%
Bootstrap support for F6Q427 as seed ortholog is 100%.
Bootstrap support for H3CJK6 as seed ortholog is 100%.

Group of orthologs #1817. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F7ASH4              	100.00%		H3C2F8              	100.00%
Bootstrap support for F7ASH4 as seed ortholog is 100%.
Bootstrap support for H3C2F8 as seed ortholog is 100%.

Group of orthologs #1818. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F6V6F4              	100.00%		H3CR64              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for H3CR64 as seed ortholog is 100%.

Group of orthologs #1819. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F6ZS04              	100.00%		H3CPF4              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for H3CPF4 as seed ortholog is 100%.

Group of orthologs #1820. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F6SGF7              	100.00%		H3DFE7              	100.00%
Bootstrap support for F6SGF7 as seed ortholog is 100%.
Bootstrap support for H3DFE7 as seed ortholog is 100%.

Group of orthologs #1821. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F6ZU53              	100.00%		H3DE67              	100.00%
Bootstrap support for F6ZU53 as seed ortholog is 100%.
Bootstrap support for H3DE67 as seed ortholog is 100%.

Group of orthologs #1822. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 T.nigroviridis:405

F6Z1E3              	100.00%		Q4T8S6              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for Q4T8S6 as seed ortholog is 100%.

Group of orthologs #1823. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 T.nigroviridis:404

F6VD75              	100.00%		H3CIW7              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for H3CIW7 as seed ortholog is 100%.

Group of orthologs #1824. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:79

F6YSP8              	100.00%		H3CFA8              	100.00%
Bootstrap support for F6YSP8 as seed ortholog is 80%.
Bootstrap support for H3CFA8 as seed ortholog is 96%.

Group of orthologs #1825. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:71

H2XSR0              	100.00%		H3CVT7              	100.00%
Bootstrap support for H2XSR0 as seed ortholog is 99%.
Bootstrap support for H3CVT7 as seed ortholog is 93%.

Group of orthologs #1826. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:48

F6ZNF4              	100.00%		H3DJK1              	100.00%
                    	       		H3DLU0              	34.31%
                    	       		H3D3A9              	22.74%
                    	       		H3CK60              	16.49%
                    	       		H3C3Y4              	5.85%
Bootstrap support for F6ZNF4 as seed ortholog is 99%.
Bootstrap support for H3DJK1 as seed ortholog is 88%.

Group of orthologs #1827. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 T.nigroviridis:403

F6ZCL3              	100.00%		H3CPM0              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for H3CPM0 as seed ortholog is 100%.

Group of orthologs #1828. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:403

F6YIR3              	100.00%		H3CTA5              	100.00%
Bootstrap support for F6YIR3 as seed ortholog is 100%.
Bootstrap support for H3CTA5 as seed ortholog is 100%.

Group of orthologs #1829. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 T.nigroviridis:403

F7B2R9              	100.00%		H3CS44              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for H3CS44 as seed ortholog is 100%.

Group of orthologs #1830. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 T.nigroviridis:403

H2Y240              	100.00%		H3D2X3              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for H3D2X3 as seed ortholog is 100%.

Group of orthologs #1831. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 T.nigroviridis:403

Q967X2              	100.00%		H3DM77              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for H3DM77 as seed ortholog is 100%.

Group of orthologs #1832. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:160

Q4H2U9              	100.00%		H3C3A1              	100.00%
                    	       		H3CLI2              	5.12%
Bootstrap support for Q4H2U9 as seed ortholog is 100%.
Bootstrap support for H3C3A1 as seed ortholog is 99%.

Group of orthologs #1833. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 T.nigroviridis:402

F6SF69              	100.00%		H3CMT0              	100.00%
Bootstrap support for F6SF69 as seed ortholog is 100%.
Bootstrap support for H3CMT0 as seed ortholog is 100%.

Group of orthologs #1834. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 T.nigroviridis:402

F6X0L7              	100.00%		H3DA19              	100.00%
Bootstrap support for F6X0L7 as seed ortholog is 100%.
Bootstrap support for H3DA19 as seed ortholog is 100%.

Group of orthologs #1835. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 T.nigroviridis:402

F6WPV3              	100.00%		H3DCV0              	100.00%
Bootstrap support for F6WPV3 as seed ortholog is 100%.
Bootstrap support for H3DCV0 as seed ortholog is 100%.

Group of orthologs #1836. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 T.nigroviridis:77

Q1RL49              	100.00%		H3DLH1              	100.00%
Bootstrap support for Q1RL49 as seed ortholog is 100%.
Bootstrap support for H3DLH1 as seed ortholog is 95%.

Group of orthologs #1837. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:255

F6ZVH3              	100.00%		H3CDI8              	100.00%
                    	       		H3CXF9              	39.28%
                    	       		H3CN15              	23.25%
Bootstrap support for F6ZVH3 as seed ortholog is 100%.
Bootstrap support for H3CDI8 as seed ortholog is 100%.

Group of orthologs #1838. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

F6S8I5              	100.00%		H3C5L4              	100.00%
                    	       		H3CS14              	19.01%
Bootstrap support for F6S8I5 as seed ortholog is 100%.
Bootstrap support for H3C5L4 as seed ortholog is 100%.

Group of orthologs #1839. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

F6UT38              	100.00%		H3CDJ1              	100.00%
Bootstrap support for F6UT38 as seed ortholog is 100%.
Bootstrap support for H3CDJ1 as seed ortholog is 100%.

Group of orthologs #1840. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:307

F6XKQ1              	100.00%		H3CAA7              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for H3CAA7 as seed ortholog is 100%.

Group of orthologs #1841. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

C4B8X0              	100.00%		H3D8D9              	100.00%
Bootstrap support for C4B8X0 as seed ortholog is 100%.
Bootstrap support for H3D8D9 as seed ortholog is 100%.

Group of orthologs #1842. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:154

F6T7E5              	100.00%		H3D406              	100.00%
Bootstrap support for F6T7E5 as seed ortholog is 100%.
Bootstrap support for H3D406 as seed ortholog is 99%.

Group of orthologs #1843. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:192

F6X159              	100.00%		H3CWP0              	100.00%
Bootstrap support for F6X159 as seed ortholog is 99%.
Bootstrap support for H3CWP0 as seed ortholog is 100%.

Group of orthologs #1844. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

F6QS20              	100.00%		H3DJM0              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for H3DJM0 as seed ortholog is 100%.

Group of orthologs #1845. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

H2XRE3              	100.00%		H3CEB7              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for H3CEB7 as seed ortholog is 100%.

Group of orthologs #1846. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:181

F6XDT3              	100.00%		H3DGK2              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for H3DGK2 as seed ortholog is 100%.

Group of orthologs #1847. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

F6V8N9              	100.00%		Q4S214              	100.00%
Bootstrap support for F6V8N9 as seed ortholog is 100%.
Bootstrap support for Q4S214 as seed ortholog is 100%.

Group of orthologs #1848. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

H2XR99              	100.00%		H3DLL2              	100.00%
Bootstrap support for H2XR99 as seed ortholog is 100%.
Bootstrap support for H3DLL2 as seed ortholog is 100%.

Group of orthologs #1849. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 T.nigroviridis:401

H2XY38              	100.00%		H3DLD9              	100.00%
Bootstrap support for H2XY38 as seed ortholog is 100%.
Bootstrap support for H3DLD9 as seed ortholog is 100%.

Group of orthologs #1850. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:292

F6VQ38              	100.00%		H3DP89              	100.00%
Bootstrap support for F6VQ38 as seed ortholog is 99%.
Bootstrap support for H3DP89 as seed ortholog is 100%.

Group of orthologs #1851. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:399

F7A8J9              	100.00%		H3DD83              	100.00%
                    	       		H3DN61              	6.83%
Bootstrap support for F7A8J9 as seed ortholog is 100%.
Bootstrap support for H3DD83 as seed ortholog is 100%.

Group of orthologs #1852. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:205

F6Q5A8              	100.00%		H3C4L4              	100.00%
Bootstrap support for F6Q5A8 as seed ortholog is 100%.
Bootstrap support for H3C4L4 as seed ortholog is 99%.

Group of orthologs #1853. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:399

F6SSM8              	100.00%		H3CSM9              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for H3CSM9 as seed ortholog is 100%.

Group of orthologs #1854. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:399

F6Y3X0              	100.00%		H3CXX5              	100.00%
Bootstrap support for F6Y3X0 as seed ortholog is 100%.
Bootstrap support for H3CXX5 as seed ortholog is 100%.

Group of orthologs #1855. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:178

F6ZPX3              	100.00%		H3D489              	100.00%
Bootstrap support for F6ZPX3 as seed ortholog is 100%.
Bootstrap support for H3D489 as seed ortholog is 100%.

Group of orthologs #1856. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 T.nigroviridis:399

H2XRU0              	100.00%		H3CMK4              	100.00%
Bootstrap support for H2XRU0 as seed ortholog is 100%.
Bootstrap support for H3CMK4 as seed ortholog is 100%.

Group of orthologs #1857. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:88

F6YG13              	100.00%		H3BXS7              	100.00%
                    	       		H3C5A5              	21.94%
                    	       		H3DLG3              	19.55%
                    	       		H3DLG2              	17.72%
                    	       		H3CZM2              	16.46%
                    	       		H3C047              	11.25%
                    	       		H3CF17              	7.45%
Bootstrap support for F6YG13 as seed ortholog is 99%.
Bootstrap support for H3BXS7 as seed ortholog is 99%.

Group of orthologs #1858. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:398

F7B9Q3              	100.00%		H3CPY9              	100.00%
                    	       		H3D728              	14.16%
                    	       		H3DH93              	8.77%
Bootstrap support for F7B9Q3 as seed ortholog is 100%.
Bootstrap support for H3CPY9 as seed ortholog is 100%.

Group of orthologs #1859. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:398

F6U831              	100.00%		H3C500              	100.00%
                    	       		H3CBL6              	36.23%
Bootstrap support for F6U831 as seed ortholog is 100%.
Bootstrap support for H3C500 as seed ortholog is 100%.

Group of orthologs #1860. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:73

F6VFZ2              	100.00%		H3DIZ2              	100.00%
                    	       		Q4SQK0              	29.31%
Bootstrap support for F6VFZ2 as seed ortholog is 100%.
Bootstrap support for H3DIZ2 as seed ortholog is 96%.

Group of orthologs #1861. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:398

Q4H367              	100.00%		H3C9S2              	100.00%
                    	       		H3DEG2              	6.56%
Bootstrap support for Q4H367 as seed ortholog is 100%.
Bootstrap support for H3C9S2 as seed ortholog is 100%.

Group of orthologs #1862. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:398

F7B4X6              	100.00%		H3CBU4              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for H3CBU4 as seed ortholog is 100%.

Group of orthologs #1863. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:86

F6VL41              	100.00%		H3D2L9              	100.00%
Bootstrap support for F6VL41 as seed ortholog is 100%.
Bootstrap support for H3D2L9 as seed ortholog is 99%.

Group of orthologs #1864. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:398

F7AAE8              	100.00%		H3D3V0              	100.00%
Bootstrap support for F7AAE8 as seed ortholog is 100%.
Bootstrap support for H3D3V0 as seed ortholog is 100%.

Group of orthologs #1865. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 T.nigroviridis:398

H2XPZ1              	100.00%		H3DMX9              	100.00%
Bootstrap support for H2XPZ1 as seed ortholog is 100%.
Bootstrap support for H3DMX9 as seed ortholog is 100%.

Group of orthologs #1866. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 T.nigroviridis:397

F6QCQ5              	100.00%		H3CPY0              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for H3CPY0 as seed ortholog is 100%.

Group of orthologs #1867. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 T.nigroviridis:143

F6PT55              	100.00%		H3DAN8              	100.00%
Bootstrap support for F6PT55 as seed ortholog is 100%.
Bootstrap support for H3DAN8 as seed ortholog is 99%.

Group of orthologs #1868. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 T.nigroviridis:225

F7BL16              	100.00%		H3D1B6              	100.00%
Bootstrap support for F7BL16 as seed ortholog is 100%.
Bootstrap support for H3D1B6 as seed ortholog is 100%.

Group of orthologs #1869. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:84

F6QHN7              	100.00%		H3D5N1              	100.00%
                    	       		H3CWN9              	33.54%
                    	       		H3CG02              	29.22%
                    	       		Q4SN97              	9.05%
Bootstrap support for F6QHN7 as seed ortholog is 100%.
Bootstrap support for H3D5N1 as seed ortholog is 99%.

Group of orthologs #1870. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F6W3Q3              	100.00%		H3CA73              	100.00%
                    	       		H3DGW8              	8.88%
Bootstrap support for F6W3Q3 as seed ortholog is 100%.
Bootstrap support for H3CA73 as seed ortholog is 100%.

Group of orthologs #1871. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F6TNU2              	100.00%		H3CP47              	100.00%
Bootstrap support for F6TNU2 as seed ortholog is 100%.
Bootstrap support for H3CP47 as seed ortholog is 100%.

Group of orthologs #1872. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F7AAS8              	100.00%		H3CFF4              	100.00%
Bootstrap support for F7AAS8 as seed ortholog is 100%.
Bootstrap support for H3CFF4 as seed ortholog is 100%.

Group of orthologs #1873. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F6R589              	100.00%		H3DD39              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for H3DD39 as seed ortholog is 100%.

Group of orthologs #1874. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:218

F6XTZ0              	100.00%		H3CW11              	100.00%
Bootstrap support for F6XTZ0 as seed ortholog is 100%.
Bootstrap support for H3CW11 as seed ortholog is 100%.

Group of orthologs #1875. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F6U6L5              	100.00%		H3DKZ1              	100.00%
Bootstrap support for F6U6L5 as seed ortholog is 100%.
Bootstrap support for H3DKZ1 as seed ortholog is 100%.

Group of orthologs #1876. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F6WVX7              	100.00%		H3DGD0              	100.00%
Bootstrap support for F6WVX7 as seed ortholog is 100%.
Bootstrap support for H3DGD0 as seed ortholog is 100%.

Group of orthologs #1877. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:178

F6WCD3              	100.00%		H3DMD7              	100.00%
Bootstrap support for F6WCD3 as seed ortholog is 100%.
Bootstrap support for H3DMD7 as seed ortholog is 100%.

Group of orthologs #1878. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 T.nigroviridis:396

F7AF81              	100.00%		H3D8B1              	100.00%
Bootstrap support for F7AF81 as seed ortholog is 100%.
Bootstrap support for H3D8B1 as seed ortholog is 100%.

Group of orthologs #1879. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 T.nigroviridis:236

F6YFP0              	100.00%		H3CET7              	100.00%
                    	       		H3DHR8              	100.00%
                    	       		H3CRV2              	31.81%
Bootstrap support for F6YFP0 as seed ortholog is 100%.
Bootstrap support for H3CET7 as seed ortholog is 100%.
Bootstrap support for H3DHR8 as seed ortholog is 100%.

Group of orthologs #1880. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 T.nigroviridis:395

F6VTZ3              	100.00%		H3DPR8              	100.00%
                    	       		H3D409              	16.94%
Bootstrap support for F6VTZ3 as seed ortholog is 100%.
Bootstrap support for H3DPR8 as seed ortholog is 100%.

Group of orthologs #1881. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 T.nigroviridis:290

F6UAP7              	100.00%		H3CMB7              	100.00%
Bootstrap support for F6UAP7 as seed ortholog is 100%.
Bootstrap support for H3CMB7 as seed ortholog is 100%.

Group of orthologs #1882. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:44

F6VZQ1              	100.00%		Q4RZF9              	100.00%
Bootstrap support for F6VZQ1 as seed ortholog is 99%.
Bootstrap support for Q4RZF9 as seed ortholog is 91%.

Group of orthologs #1883. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:186

H2XZE5              	100.00%		H3CW95              	100.00%
Bootstrap support for H2XZE5 as seed ortholog is 100%.
Bootstrap support for H3CW95 as seed ortholog is 100%.

Group of orthologs #1884. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

F6Q5L2              	100.00%		H3D5P5              	100.00%
Bootstrap support for F6Q5L2 as seed ortholog is 100%.
Bootstrap support for H3D5P5 as seed ortholog is 100%.

Group of orthologs #1885. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

F6XCY9              	100.00%		H3CME5              	100.00%
Bootstrap support for F6XCY9 as seed ortholog is 100%.
Bootstrap support for H3CME5 as seed ortholog is 100%.

Group of orthologs #1886. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:152

F6SKG8              	100.00%		H3D9X6              	100.00%
Bootstrap support for F6SKG8 as seed ortholog is 100%.
Bootstrap support for H3D9X6 as seed ortholog is 99%.

Group of orthologs #1887. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

H2XWN4              	100.00%		H3CEW1              	100.00%
Bootstrap support for H2XWN4 as seed ortholog is 100%.
Bootstrap support for H3CEW1 as seed ortholog is 100%.

Group of orthologs #1888. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

F6WST8              	100.00%		H3DG73              	100.00%
Bootstrap support for F6WST8 as seed ortholog is 100%.
Bootstrap support for H3DG73 as seed ortholog is 100%.

Group of orthologs #1889. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

Q4H3S6              	100.00%		H3CQA7              	100.00%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for H3CQA7 as seed ortholog is 100%.

Group of orthologs #1890. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

H2XYQ2              	100.00%		H3DI15              	100.00%
Bootstrap support for H2XYQ2 as seed ortholog is 100%.
Bootstrap support for H3DI15 as seed ortholog is 100%.

Group of orthologs #1891. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 T.nigroviridis:394

Q67EQ6              	100.00%		H3DBU2              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for H3DBU2 as seed ortholog is 100%.

Group of orthologs #1892. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 T.nigroviridis:393

F7A4J9              	100.00%		H3BXQ3              	100.00%
                    	       		H3DA14              	14.65%
Bootstrap support for F7A4J9 as seed ortholog is 100%.
Bootstrap support for H3BXQ3 as seed ortholog is 100%.

Group of orthologs #1893. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 T.nigroviridis:393

F6S3G5              	100.00%		H3DPA9              	100.00%
                    	       		H3DFV6              	27.80%
Bootstrap support for F6S3G5 as seed ortholog is 100%.
Bootstrap support for H3DPA9 as seed ortholog is 100%.

Group of orthologs #1894. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:167

F6TI28              	100.00%		H3CUV4              	100.00%
Bootstrap support for F6TI28 as seed ortholog is 100%.
Bootstrap support for H3CUV4 as seed ortholog is 100%.

Group of orthologs #1895. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 T.nigroviridis:153

F7B4P3              	100.00%		H3C3X4              	100.00%
Bootstrap support for F7B4P3 as seed ortholog is 100%.
Bootstrap support for H3C3X4 as seed ortholog is 99%.

Group of orthologs #1896. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:392

F6RWR9              	100.00%		H3D188              	100.00%
                    	       		H3CYC9              	6.58%
Bootstrap support for F6RWR9 as seed ortholog is 100%.
Bootstrap support for H3D188 as seed ortholog is 100%.

Group of orthologs #1897. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:178

F6SH39              	100.00%		Q4RX42              	100.00%
                    	       		H3DCU5              	22.37%
Bootstrap support for F6SH39 as seed ortholog is 100%.
Bootstrap support for Q4RX42 as seed ortholog is 100%.

Group of orthologs #1898. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:392

F6S5I8              	100.00%		H3DEZ5              	100.00%
Bootstrap support for F6S5I8 as seed ortholog is 100%.
Bootstrap support for H3DEZ5 as seed ortholog is 100%.

Group of orthologs #1899. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:392

F6YDG1              	100.00%		H3D152              	100.00%
Bootstrap support for F6YDG1 as seed ortholog is 100%.
Bootstrap support for H3D152 as seed ortholog is 100%.

Group of orthologs #1900. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:392

F7ASN6              	100.00%		H3CS26              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for H3CS26 as seed ortholog is 100%.

Group of orthologs #1901. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:392

F6VKM8              	100.00%		H3DFM6              	100.00%
Bootstrap support for F6VKM8 as seed ortholog is 100%.
Bootstrap support for H3DFM6 as seed ortholog is 100%.

Group of orthologs #1902. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:180

F6U952              	100.00%		Q4RST5              	100.00%
Bootstrap support for F6U952 as seed ortholog is 100%.
Bootstrap support for Q4RST5 as seed ortholog is 99%.

Group of orthologs #1903. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 T.nigroviridis:392

F6XWN6              	100.00%		Q4RR37              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for Q4RR37 as seed ortholog is 100%.

Group of orthologs #1904. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:94

F6XQI0              	100.00%		H3DNK4              	100.00%
                    	       		Q4RWI3              	65.17%
                    	       		H3DGD8              	49.44%
                    	       		Q4SPX1              	12.92%
                    	       		H3CLH3              	10.86%
Bootstrap support for F6XQI0 as seed ortholog is 100%.
Bootstrap support for H3DNK4 as seed ortholog is 99%.

Group of orthologs #1905. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:391

F6Q0S7              	100.00%		H3CG20              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for H3CG20 as seed ortholog is 100%.

Group of orthologs #1906. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:320

F6QQM7              	100.00%		H3CFR4              	100.00%
Bootstrap support for F6QQM7 as seed ortholog is 99%.
Bootstrap support for H3CFR4 as seed ortholog is 100%.

Group of orthologs #1907. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:391

F6T5M6              	100.00%		H3CEF5              	100.00%
Bootstrap support for F6T5M6 as seed ortholog is 100%.
Bootstrap support for H3CEF5 as seed ortholog is 100%.

Group of orthologs #1908. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:391

F6R7B5              	100.00%		H3CNJ2              	100.00%
Bootstrap support for F6R7B5 as seed ortholog is 100%.
Bootstrap support for H3CNJ2 as seed ortholog is 100%.

Group of orthologs #1909. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:270

F6XX66              	100.00%		H3CNZ2              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 100%.
Bootstrap support for H3CNZ2 as seed ortholog is 100%.

Group of orthologs #1910. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:236

F6VAW2              	100.00%		H3D1A7              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for H3D1A7 as seed ortholog is 100%.

Group of orthologs #1911. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:391

F6TBE2              	100.00%		H3DPV6              	100.00%
Bootstrap support for F6TBE2 as seed ortholog is 100%.
Bootstrap support for H3DPV6 as seed ortholog is 100%.

Group of orthologs #1912. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:273

Q68A31              	100.00%		H3CJY4              	100.00%
Bootstrap support for Q68A31 as seed ortholog is 100%.
Bootstrap support for H3CJY4 as seed ortholog is 100%.

Group of orthologs #1913. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 T.nigroviridis:77

H2XSN3              	100.00%		H3DHM2              	100.00%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for H3DHM2 as seed ortholog is 99%.

Group of orthologs #1914. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 T.nigroviridis:32

H2XQX1              	100.00%		H3CLF1              	100.00%
                    	       		H3CUR1              	63.96%
                    	       		H3DNJ5              	47.70%
Bootstrap support for H2XQX1 as seed ortholog is 100%.
Bootstrap support for H3CLF1 as seed ortholog is 69%.
Alternative seed ortholog is H3CLE4 (32 bits away from this cluster)

Group of orthologs #1915. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 T.nigroviridis:390

F7AM61              	100.00%		H3DL29              	100.00%
                    	       		H3CJX7              	30.09%
Bootstrap support for F7AM61 as seed ortholog is 100%.
Bootstrap support for H3DL29 as seed ortholog is 100%.

Group of orthologs #1916. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:199

F6VMY2              	100.00%		H3CUG1              	100.00%
Bootstrap support for F6VMY2 as seed ortholog is 100%.
Bootstrap support for H3CUG1 as seed ortholog is 100%.

Group of orthologs #1917. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 T.nigroviridis:111

F6Y836              	100.00%		H3CW30              	100.00%
Bootstrap support for F6Y836 as seed ortholog is 100%.
Bootstrap support for H3CW30 as seed ortholog is 99%.

Group of orthologs #1918. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:302

H2XX49              	100.00%		Q4S2E2              	100.00%
Bootstrap support for H2XX49 as seed ortholog is 100%.
Bootstrap support for Q4S2E2 as seed ortholog is 100%.

Group of orthologs #1919. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:389

F6UAH7              	100.00%		H3DKV5              	100.00%
                    	       		H3D5T7              	11.01%
Bootstrap support for F6UAH7 as seed ortholog is 100%.
Bootstrap support for H3DKV5 as seed ortholog is 100%.

Group of orthologs #1920. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:389

F6ULS9              	100.00%		H3CC87              	100.00%
Bootstrap support for F6ULS9 as seed ortholog is 100%.
Bootstrap support for H3CC87 as seed ortholog is 100%.

Group of orthologs #1921. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:389

F7AZ43              	100.00%		H3CC74              	100.00%
Bootstrap support for F7AZ43 as seed ortholog is 100%.
Bootstrap support for H3CC74 as seed ortholog is 100%.

Group of orthologs #1922. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:389

F7AEY7              	100.00%		H3CXX9              	100.00%
Bootstrap support for F7AEY7 as seed ortholog is 100%.
Bootstrap support for H3CXX9 as seed ortholog is 100%.

Group of orthologs #1923. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:389

F6ZT62              	100.00%		H3D0X2              	100.00%
Bootstrap support for F6ZT62 as seed ortholog is 100%.
Bootstrap support for H3D0X2 as seed ortholog is 100%.

Group of orthologs #1924. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:389

H2XXZ6              	100.00%		H3CPR7              	100.00%
Bootstrap support for H2XXZ6 as seed ortholog is 100%.
Bootstrap support for H3CPR7 as seed ortholog is 100%.

Group of orthologs #1925. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 T.nigroviridis:89

H2Y3D5              	100.00%		H3DAG0              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for H3DAG0 as seed ortholog is 97%.

Group of orthologs #1926. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 T.nigroviridis:388

F6VXA3              	100.00%		H3DKH1              	100.00%
                    	       		H3DM67              	21.87%
Bootstrap support for F6VXA3 as seed ortholog is 100%.
Bootstrap support for H3DKH1 as seed ortholog is 100%.

Group of orthologs #1927. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:329

F6ZPV8              	100.00%		H3C6B1              	100.00%
Bootstrap support for F6ZPV8 as seed ortholog is 100%.
Bootstrap support for H3C6B1 as seed ortholog is 100%.

Group of orthologs #1928. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 T.nigroviridis:388

F6Y5N8              	100.00%		H3CXQ9              	100.00%
Bootstrap support for F6Y5N8 as seed ortholog is 100%.
Bootstrap support for H3CXQ9 as seed ortholog is 100%.

Group of orthologs #1929. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 T.nigroviridis:388

Q7YZS7              	100.00%		H3DG95              	100.00%
Bootstrap support for Q7YZS7 as seed ortholog is 100%.
Bootstrap support for H3DG95 as seed ortholog is 100%.

Group of orthologs #1930. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:100

F6PN33              	100.00%		H3C0T3              	100.00%
                    	       		H3CC38              	13.31%
Bootstrap support for F6PN33 as seed ortholog is 97%.
Bootstrap support for H3C0T3 as seed ortholog is 99%.

Group of orthologs #1931. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 T.nigroviridis:387

F6W713              	100.00%		H3C179              	100.00%
                    	       		H3CRR5              	98.66%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for H3C179 as seed ortholog is 100%.

Group of orthologs #1932. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 T.nigroviridis:202

F6XLK3              	100.00%		H3D1E6              	100.00%
                    	       		H3DEZ9              	27.34%
Bootstrap support for F6XLK3 as seed ortholog is 100%.
Bootstrap support for H3D1E6 as seed ortholog is 100%.

Group of orthologs #1933. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 T.nigroviridis:387

F6TVB5              	100.00%		H3DLD5              	100.00%
                    	       		H3CBB0              	18.92%
Bootstrap support for F6TVB5 as seed ortholog is 100%.
Bootstrap support for H3DLD5 as seed ortholog is 100%.

Group of orthologs #1934. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 T.nigroviridis:387

H2XVC3              	100.00%		H3CA52              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for H3CA52 as seed ortholog is 100%.

Group of orthologs #1935. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:386

F6Q041              	100.00%		H3DQ40              	100.00%
                    	       		H3D2M9              	44.75%
                    	       		H3CDQ4              	42.15%
Bootstrap support for F6Q041 as seed ortholog is 100%.
Bootstrap support for H3DQ40 as seed ortholog is 100%.

Group of orthologs #1936. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:386

F7A9J1              	100.00%		H3CLJ9              	100.00%
                    	       		H3CVG5              	16.82%
Bootstrap support for F7A9J1 as seed ortholog is 100%.
Bootstrap support for H3CLJ9 as seed ortholog is 100%.

Group of orthologs #1937. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:386

F6TW46              	100.00%		H3DA60              	100.00%
                    	       		H3DFD5              	13.97%
Bootstrap support for F6TW46 as seed ortholog is 100%.
Bootstrap support for H3DA60 as seed ortholog is 100%.

Group of orthologs #1938. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:174

F6ZRP3              	100.00%		H3C2H5              	100.00%
Bootstrap support for F6ZRP3 as seed ortholog is 96%.
Bootstrap support for H3C2H5 as seed ortholog is 99%.

Group of orthologs #1939. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:190

F6X034              	100.00%		H3DEU2              	100.00%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for H3DEU2 as seed ortholog is 100%.

Group of orthologs #1940. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:386

H2XLW7              	100.00%		H3CY95              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for H3CY95 as seed ortholog is 100%.

Group of orthologs #1941. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:290

F6WR94              	100.00%		Q4T0A0              	100.00%
Bootstrap support for F6WR94 as seed ortholog is 100%.
Bootstrap support for Q4T0A0 as seed ortholog is 100%.

Group of orthologs #1942. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 T.nigroviridis:386

F6XXF0              	100.00%		Q4SVR3              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for Q4SVR3 as seed ortholog is 100%.

Group of orthologs #1943. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 T.nigroviridis:385

F6YA02              	100.00%		H3CT85              	100.00%
                    	       		H3DF87              	42.92%
                    	       		Q4RSR7              	33.02%
Bootstrap support for F6YA02 as seed ortholog is 100%.
Bootstrap support for H3CT85 as seed ortholog is 100%.

Group of orthologs #1944. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:244

F6SZ54              	100.00%		H3CDV1              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 100%.
Bootstrap support for H3CDV1 as seed ortholog is 100%.

Group of orthologs #1945. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:276

F6RD78              	100.00%		H3CWA8              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 100%.
Bootstrap support for H3CWA8 as seed ortholog is 100%.

Group of orthologs #1946. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 T.nigroviridis:385

F6YJ84              	100.00%		H3CLS9              	100.00%
Bootstrap support for F6YJ84 as seed ortholog is 100%.
Bootstrap support for H3CLS9 as seed ortholog is 100%.

Group of orthologs #1947. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 T.nigroviridis:70

H2XVX5              	100.00%		H3BZK1              	100.00%
Bootstrap support for H2XVX5 as seed ortholog is 100%.
Bootstrap support for H3BZK1 as seed ortholog is 96%.

Group of orthologs #1948. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:284

H2XZF9              	100.00%		H3D347              	100.00%
Bootstrap support for H2XZF9 as seed ortholog is 100%.
Bootstrap support for H3D347 as seed ortholog is 100%.

Group of orthologs #1949. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:384

F6PQN7              	100.00%		H3DLV1              	100.00%
                    	       		H3DN42              	13.88%
                    	       		H3DDC9              	10.65%
Bootstrap support for F6PQN7 as seed ortholog is 100%.
Bootstrap support for H3DLV1 as seed ortholog is 100%.

Group of orthologs #1950. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:384

F6VPX3              	100.00%		H3CJF4              	100.00%
                    	       		Q4SVK8              	37.68%
Bootstrap support for F6VPX3 as seed ortholog is 100%.
Bootstrap support for H3CJF4 as seed ortholog is 100%.

Group of orthologs #1951. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:384

H2XL54              	100.00%		H3BW92              	100.00%
                    	       		H3DB39              	33.64%
Bootstrap support for H2XL54 as seed ortholog is 100%.
Bootstrap support for H3BW92 as seed ortholog is 100%.

Group of orthologs #1952. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:384

F6WTW2              	100.00%		H3C6W7              	100.00%
Bootstrap support for F6WTW2 as seed ortholog is 100%.
Bootstrap support for H3C6W7 as seed ortholog is 100%.

Group of orthologs #1953. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:223

F6TVE9              	100.00%		H3CHI8              	100.00%
Bootstrap support for F6TVE9 as seed ortholog is 99%.
Bootstrap support for H3CHI8 as seed ortholog is 99%.

Group of orthologs #1954. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 T.nigroviridis:384

F6R2V7              	100.00%		H3DG54              	100.00%
Bootstrap support for F6R2V7 as seed ortholog is 100%.
Bootstrap support for H3DG54 as seed ortholog is 100%.

Group of orthologs #1955. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:216

F7A9K4              	100.00%		H3D9A2              	100.00%
Bootstrap support for F7A9K4 as seed ortholog is 99%.
Bootstrap support for H3D9A2 as seed ortholog is 100%.

Group of orthologs #1956. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 T.nigroviridis:383

F6PR01              	100.00%		H3DL48              	100.00%
                    	       		H3D9D8              	28.25%
                    	       		H3DDN0              	22.27%
Bootstrap support for F6PR01 as seed ortholog is 100%.
Bootstrap support for H3DL48 as seed ortholog is 100%.

Group of orthologs #1957. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 T.nigroviridis:383

F6Y7Q5              	100.00%		H3D551              	100.00%
                    	       		H3CYN9              	33.91%
Bootstrap support for F6Y7Q5 as seed ortholog is 100%.
Bootstrap support for H3D551 as seed ortholog is 100%.

Group of orthologs #1958. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 T.nigroviridis:383

F6PR16              	100.00%		H3DE72              	100.00%
Bootstrap support for F6PR16 as seed ortholog is 100%.
Bootstrap support for H3DE72 as seed ortholog is 100%.

Group of orthologs #1959. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 T.nigroviridis:383

F6T2X1              	100.00%		H3D712              	100.00%
Bootstrap support for F6T2X1 as seed ortholog is 100%.
Bootstrap support for H3D712 as seed ortholog is 100%.

Group of orthologs #1960. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:383

H2XVE9              	100.00%		H3DKF9              	100.00%
Bootstrap support for H2XVE9 as seed ortholog is 100%.
Bootstrap support for H3DKF9 as seed ortholog is 100%.

Group of orthologs #1961. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

F6YQM8              	100.00%		H3DF86              	100.00%
                    	       		H3D681              	44.63%
Bootstrap support for F6YQM8 as seed ortholog is 100%.
Bootstrap support for H3DF86 as seed ortholog is 100%.

Group of orthologs #1962. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

C4B8W8              	100.00%		H3CYI3              	100.00%
Bootstrap support for C4B8W8 as seed ortholog is 100%.
Bootstrap support for H3CYI3 as seed ortholog is 100%.

Group of orthologs #1963. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:288

F6VBG8              	100.00%		H3CIN1              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for H3CIN1 as seed ortholog is 100%.

Group of orthologs #1964. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

H2XK69              	100.00%		H3BVN1              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for H3BVN1 as seed ortholog is 100%.

Group of orthologs #1965. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

F7BKI5              	100.00%		H3CKG1              	100.00%
Bootstrap support for F7BKI5 as seed ortholog is 100%.
Bootstrap support for H3CKG1 as seed ortholog is 100%.

Group of orthologs #1966. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

F7B376              	100.00%		H3CQ25              	100.00%
Bootstrap support for F7B376 as seed ortholog is 100%.
Bootstrap support for H3CQ25 as seed ortholog is 100%.

Group of orthologs #1967. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:272

F7ASM2              	100.00%		H3CVC6              	100.00%
Bootstrap support for F7ASM2 as seed ortholog is 100%.
Bootstrap support for H3CVC6 as seed ortholog is 100%.

Group of orthologs #1968. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:382

H2XQ91              	100.00%		H3CTJ7              	100.00%
Bootstrap support for H2XQ91 as seed ortholog is 100%.
Bootstrap support for H3CTJ7 as seed ortholog is 100%.

Group of orthologs #1969. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:382

H2XP13              	100.00%		H3D248              	100.00%
Bootstrap support for H2XP13 as seed ortholog is 100%.
Bootstrap support for H3D248 as seed ortholog is 100%.

Group of orthologs #1970. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

H2Y1L9              	100.00%		H3CJV1              	100.00%
Bootstrap support for H2Y1L9 as seed ortholog is 100%.
Bootstrap support for H3CJV1 as seed ortholog is 100%.

Group of orthologs #1971. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 T.nigroviridis:382

F7AMR5              	100.00%		Q4SDJ7              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for Q4SDJ7 as seed ortholog is 100%.

Group of orthologs #1972. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:43

F6THW7              	100.00%		H3CNA7              	100.00%
                    	       		H3DJS6              	16.25%
Bootstrap support for F6THW7 as seed ortholog is 100%.
Bootstrap support for H3CNA7 as seed ortholog is 93%.

Group of orthologs #1973. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:381

F6ZBD0              	100.00%		H3CGV6              	100.00%
Bootstrap support for F6ZBD0 as seed ortholog is 100%.
Bootstrap support for H3CGV6 as seed ortholog is 100%.

Group of orthologs #1974. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:322

F7AIP5              	100.00%		H3CPZ3              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for H3CPZ3 as seed ortholog is 100%.

Group of orthologs #1975. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:330

F7ATG5              	100.00%		H3CQD0              	100.00%
Bootstrap support for F7ATG5 as seed ortholog is 100%.
Bootstrap support for H3CQD0 as seed ortholog is 100%.

Group of orthologs #1976. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 T.nigroviridis:381

F6RMR3              	100.00%		H3DNI5              	100.00%
Bootstrap support for F6RMR3 as seed ortholog is 100%.
Bootstrap support for H3DNI5 as seed ortholog is 100%.

Group of orthologs #1977. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:149

F6SMU1              	100.00%		H3DB20              	100.00%
                    	       		H3CSJ1              	34.99%
                    	       		H3CZC0              	23.33%
                    	       		H3DD08              	21.27%
                    	       		H3DLW7              	7.72%
Bootstrap support for F6SMU1 as seed ortholog is 100%.
Bootstrap support for H3DB20 as seed ortholog is 99%.

Group of orthologs #1978. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:380

F6WQ28              	100.00%		H3C9T2              	100.00%
                    	       		H3DJC5              	29.92%
Bootstrap support for F6WQ28 as seed ortholog is 100%.
Bootstrap support for H3C9T2 as seed ortholog is 100%.

Group of orthologs #1979. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:252

F7AS27              	100.00%		H3CSG5              	100.00%
                    	       		H3CM60              	9.73%
Bootstrap support for F7AS27 as seed ortholog is 100%.
Bootstrap support for H3CSG5 as seed ortholog is 100%.

Group of orthologs #1980. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:91

H2XN98              	100.00%		H3D4K6              	100.00%
                    	       		H3DP09              	13.18%
Bootstrap support for H2XN98 as seed ortholog is 100%.
Bootstrap support for H3D4K6 as seed ortholog is 98%.

Group of orthologs #1981. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:336

F6TX35              	100.00%		H3BYY5              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for H3BYY5 as seed ortholog is 100%.

Group of orthologs #1982. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:380

F6VKF0              	100.00%		H3CDP4              	100.00%
Bootstrap support for F6VKF0 as seed ortholog is 100%.
Bootstrap support for H3CDP4 as seed ortholog is 100%.

Group of orthologs #1983. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:380

F6STU7              	100.00%		H3CWA2              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for H3CWA2 as seed ortholog is 100%.

Group of orthologs #1984. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 T.nigroviridis:380

F6YY79              	100.00%		H3CK91              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for H3CK91 as seed ortholog is 100%.

Group of orthologs #1985. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:50

F7AK04              	100.00%		H3CME6              	100.00%
Bootstrap support for F7AK04 as seed ortholog is 87%.
Bootstrap support for H3CME6 as seed ortholog is 89%.

Group of orthologs #1986. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:379

F6QZL4              	100.00%		H3DBV5              	100.00%
                    	       		H3D0Q1              	27.69%
                    	       		H3DAB6              	20.21%
Bootstrap support for F6QZL4 as seed ortholog is 100%.
Bootstrap support for H3DBV5 as seed ortholog is 100%.

Group of orthologs #1987. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:169

H2XW16              	100.00%		H3CWT5              	100.00%
                    	       		H3CDC9              	73.67%
Bootstrap support for H2XW16 as seed ortholog is 89%.
Bootstrap support for H3CWT5 as seed ortholog is 100%.

Group of orthologs #1988. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:19

Q1RLH6              	100.00%		H3DLY5              	100.00%
                    	       		H3CFJ3              	19.75%
Bootstrap support for Q1RLH6 as seed ortholog is 100%.
Bootstrap support for H3DLY5 as seed ortholog is 61%.
Alternative seed ortholog is H3D387 (19 bits away from this cluster)

Group of orthologs #1989. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:297

F6UHV9              	100.00%		H3CJS0              	100.00%
Bootstrap support for F6UHV9 as seed ortholog is 100%.
Bootstrap support for H3CJS0 as seed ortholog is 100%.

Group of orthologs #1990. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:300

F6ZP02              	100.00%		H3CJ03              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for H3CJ03 as seed ortholog is 100%.

Group of orthologs #1991. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:379

F6PX81              	100.00%		H3DPW0              	100.00%
Bootstrap support for F6PX81 as seed ortholog is 100%.
Bootstrap support for H3DPW0 as seed ortholog is 100%.

Group of orthologs #1992. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:81

F6YCY6              	100.00%		H3D2D6              	100.00%
Bootstrap support for F6YCY6 as seed ortholog is 100%.
Bootstrap support for H3D2D6 as seed ortholog is 98%.

Group of orthologs #1993. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:379

F7ASJ4              	100.00%		H3DAG1              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for H3DAG1 as seed ortholog is 100%.

Group of orthologs #1994. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 T.nigroviridis:48

F6XML2              	100.00%		Q4RSV0              	100.00%
Bootstrap support for F6XML2 as seed ortholog is 100%.
Bootstrap support for Q4RSV0 as seed ortholog is 93%.

Group of orthologs #1995. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:239

F6Z491              	100.00%		Q4SRB7              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for Q4SRB7 as seed ortholog is 100%.

Group of orthologs #1996. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:378

F6VDU4              	100.00%		H3D0Z7              	100.00%
H2XRS2              	17.89%		H3CX38              	51.51%
F6U734              	17.20%		H3D5E9              	17.89%
                    	       		H3CK13              	7.03%
                    	       		H3C5E5              	5.18%
Bootstrap support for F6VDU4 as seed ortholog is 98%.
Bootstrap support for H3D0Z7 as seed ortholog is 100%.

Group of orthologs #1997. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:378

F7AI88              	100.00%		H3CHQ8              	100.00%
                    	       		H3CDR7              	31.74%
                    	       		H3CXN4              	19.52%
Bootstrap support for F7AI88 as seed ortholog is 100%.
Bootstrap support for H3CHQ8 as seed ortholog is 100%.

Group of orthologs #1998. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:378

F7BH38              	100.00%		H3DCP3              	100.00%
                    	       		H3DAS6              	16.88%
                    	       		H3DDX8              	5.14%
Bootstrap support for F7BH38 as seed ortholog is 100%.
Bootstrap support for H3DCP3 as seed ortholog is 100%.

Group of orthologs #1999. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:286

F7B7X5              	100.00%		H3CL40              	100.00%
                    	       		H3DJF0              	14.88%
Bootstrap support for F7B7X5 as seed ortholog is 100%.
Bootstrap support for H3CL40 as seed ortholog is 100%.

Group of orthologs #2000. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:378

F6QX88              	100.00%		H3CFW0              	100.00%
Bootstrap support for F6QX88 as seed ortholog is 100%.
Bootstrap support for H3CFW0 as seed ortholog is 100%.

Group of orthologs #2001. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:314

F6RBK2              	100.00%		H3D6Y5              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 100%.
Bootstrap support for H3D6Y5 as seed ortholog is 100%.

Group of orthologs #2002. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:378

F6V5I4              	100.00%		H3DBB3              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for H3DBB3 as seed ortholog is 100%.

Group of orthologs #2003. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:378

F6Z2X4              	100.00%		H3D8U5              	100.00%
Bootstrap support for F6Z2X4 as seed ortholog is 100%.
Bootstrap support for H3D8U5 as seed ortholog is 100%.

Group of orthologs #2004. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:294

F6Z541              	100.00%		H3DHH9              	100.00%
Bootstrap support for F6Z541 as seed ortholog is 100%.
Bootstrap support for H3DHH9 as seed ortholog is 98%.

Group of orthologs #2005. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 T.nigroviridis:186

H2XQ27              	100.00%		H3D7F7              	100.00%
Bootstrap support for H2XQ27 as seed ortholog is 100%.
Bootstrap support for H3D7F7 as seed ortholog is 99%.

Group of orthologs #2006. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:105

F6PJI6              	100.00%		H3C493              	100.00%
Q07068              	98.68%		H3BYP9              	35.03%
                    	       		Q4RWQ5              	35.03%
                    	       		H3CHP2              	16.56%
Bootstrap support for F6PJI6 as seed ortholog is 99%.
Bootstrap support for H3C493 as seed ortholog is 100%.

Group of orthologs #2007. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:377

F6SXN2              	100.00%		H3CM72              	100.00%
                    	       		H3CFT5              	30.29%
                    	       		H3D456              	6.29%
Bootstrap support for F6SXN2 as seed ortholog is 99%.
Bootstrap support for H3CM72 as seed ortholog is 100%.

Group of orthologs #2008. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:377

F6WMV3              	100.00%		H3C4R2              	100.00%
                    	       		H3DP11              	7.73%
Bootstrap support for F6WMV3 as seed ortholog is 95%.
Bootstrap support for H3C4R2 as seed ortholog is 100%.

Group of orthologs #2009. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 T.nigroviridis:377

Q1RPW1              	100.00%		H3CRV3              	100.00%
                    	       		H3CU73              	12.90%
Bootstrap support for Q1RPW1 as seed ortholog is 100%.
Bootstrap support for H3CRV3 as seed ortholog is 100%.

Group of orthologs #2010. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 T.nigroviridis:377

F6RDQ7              	100.00%		H3CQC7              	100.00%
Bootstrap support for F6RDQ7 as seed ortholog is 100%.
Bootstrap support for H3CQC7 as seed ortholog is 100%.

Group of orthologs #2011. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 T.nigroviridis:151

F6SWB6              	100.00%		H3CYR9              	100.00%
Bootstrap support for F6SWB6 as seed ortholog is 100%.
Bootstrap support for H3CYR9 as seed ortholog is 99%.

Group of orthologs #2012. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 T.nigroviridis:377

F6RA65              	100.00%		H3DD75              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for H3DD75 as seed ortholog is 100%.

Group of orthologs #2013. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 T.nigroviridis:377

F6VHI4              	100.00%		H3D7J6              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for H3D7J6 as seed ortholog is 100%.

Group of orthologs #2014. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:377

H2XZ54              	100.00%		Q4SK90              	100.00%
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for Q4SK90 as seed ortholog is 100%.

Group of orthologs #2015. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:376

F6XMI0              	100.00%		H3DA71              	100.00%
                    	       		H3CUF7              	28.09%
                    	       		H3CZK0              	7.37%
Bootstrap support for F6XMI0 as seed ortholog is 100%.
Bootstrap support for H3DA71 as seed ortholog is 100%.

Group of orthologs #2016. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:168

F6U7K8              	100.00%		H3DNV4              	100.00%
                    	       		H3DGS2              	15.65%
                    	       		H3CAC1              	8.21%
Bootstrap support for F6U7K8 as seed ortholog is 99%.
Bootstrap support for H3DNV4 as seed ortholog is 99%.

Group of orthologs #2017. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:250

F6ZLL3              	100.00%		H3CT00              	100.00%
                    	       		H3CIC7              	32.47%
Bootstrap support for F6ZLL3 as seed ortholog is 100%.
Bootstrap support for H3CT00 as seed ortholog is 100%.

Group of orthologs #2018. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:149

H2XWT4              	100.00%		Q4RWN7              	100.00%
                    	       		H3CCP9              	35.40%
Bootstrap support for H2XWT4 as seed ortholog is 100%.
Bootstrap support for Q4RWN7 as seed ortholog is 100%.

Group of orthologs #2019. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:376

F6T7H6              	100.00%		H3CH64              	100.00%
Bootstrap support for F6T7H6 as seed ortholog is 100%.
Bootstrap support for H3CH64 as seed ortholog is 100%.

Group of orthologs #2020. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:376

F7B503              	100.00%		H3CCT0              	100.00%
Bootstrap support for F7B503 as seed ortholog is 100%.
Bootstrap support for H3CCT0 as seed ortholog is 100%.

Group of orthologs #2021. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:376

F7B5Q2              	100.00%		H3DJ31              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for H3DJ31 as seed ortholog is 100%.

Group of orthologs #2022. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:140

H2XT98              	100.00%		H3D5W7              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for H3D5W7 as seed ortholog is 100%.

Group of orthologs #2023. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:376

H2XJG6              	100.00%		Q4S3C9              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for Q4S3C9 as seed ortholog is 100%.

Group of orthologs #2024. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 T.nigroviridis:376

Q8HIN5              	100.00%		Q4JQH5              	100.00%
Bootstrap support for Q8HIN5 as seed ortholog is 100%.
Bootstrap support for Q4JQH5 as seed ortholog is 100%.

Group of orthologs #2025. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 T.nigroviridis:375

F6TBW4              	100.00%		H3DDI5              	100.00%
                    	       		H3DNE2              	13.77%
Bootstrap support for F6TBW4 as seed ortholog is 100%.
Bootstrap support for H3DDI5 as seed ortholog is 100%.

Group of orthologs #2026. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 T.nigroviridis:375

F6RRF2              	100.00%		H3DE60              	100.00%
Bootstrap support for F6RRF2 as seed ortholog is 100%.
Bootstrap support for H3DE60 as seed ortholog is 100%.

Group of orthologs #2027. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:250

F6XEX3              	100.00%		H3CMC4              	100.00%
F6XEW4              	18.78%		
Bootstrap support for F6XEX3 as seed ortholog is 100%.
Bootstrap support for H3CMC4 as seed ortholog is 100%.

Group of orthologs #2028. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:280

F6VQ02              	100.00%		H3CP56              	100.00%
Bootstrap support for F6VQ02 as seed ortholog is 100%.
Bootstrap support for H3CP56 as seed ortholog is 100%.

Group of orthologs #2029. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:32

F6RUQ3              	100.00%		Q4SGW1              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for Q4SGW1 as seed ortholog is 88%.

Group of orthologs #2030. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:374

F6VXM8              	100.00%		Q4RFP0              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 100%.
Bootstrap support for Q4RFP0 as seed ortholog is 100%.

Group of orthologs #2031. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 T.nigroviridis:374

F6ZG25              	100.00%		H3DGQ4              	100.00%
Bootstrap support for F6ZG25 as seed ortholog is 100%.
Bootstrap support for H3DGQ4 as seed ortholog is 100%.

Group of orthologs #2032. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 T.nigroviridis:154

F6PW95              	100.00%		H3D8G5              	100.00%
                    	       		H3C9U9              	52.41%
Bootstrap support for F6PW95 as seed ortholog is 100%.
Bootstrap support for H3D8G5 as seed ortholog is 100%.

Group of orthologs #2033. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:234

F6Z839              	100.00%		H3CMS8              	100.00%
                    	       		H3C9J3              	15.33%
Bootstrap support for F6Z839 as seed ortholog is 100%.
Bootstrap support for H3CMS8 as seed ortholog is 100%.

Group of orthologs #2034. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 T.nigroviridis:246

F6WNH9              	100.00%		Q4SQI1              	100.00%
                    	       		H3DEH7              	58.44%
Bootstrap support for F6WNH9 as seed ortholog is 100%.
Bootstrap support for Q4SQI1 as seed ortholog is 100%.

Group of orthologs #2035. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:373

F6UIB0              	100.00%		H3CB78              	100.00%
Bootstrap support for F6UIB0 as seed ortholog is 79%.
Bootstrap support for H3CB78 as seed ortholog is 100%.

Group of orthologs #2036. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 T.nigroviridis:373

F6Y0T9              	100.00%		H3CKV5              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for H3CKV5 as seed ortholog is 100%.

Group of orthologs #2037. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 T.nigroviridis:373

F6ZF50              	100.00%		H3D870              	100.00%
Bootstrap support for F6ZF50 as seed ortholog is 100%.
Bootstrap support for H3D870 as seed ortholog is 100%.

Group of orthologs #2038. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 T.nigroviridis:372

F6YRA9              	100.00%		H3CXW6              	100.00%
F6XKQ6              	84.80%		
Bootstrap support for F6YRA9 as seed ortholog is 100%.
Bootstrap support for H3CXW6 as seed ortholog is 100%.

Group of orthologs #2039. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 T.nigroviridis:372

F6TLP7              	100.00%		H3CML6              	100.00%
Bootstrap support for F6TLP7 as seed ortholog is 100%.
Bootstrap support for H3CML6 as seed ortholog is 100%.

Group of orthologs #2040. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 T.nigroviridis:52

F6WPZ9              	100.00%		H3CRM7              	100.00%
Bootstrap support for F6WPZ9 as seed ortholog is 100%.
Bootstrap support for H3CRM7 as seed ortholog is 84%.

Group of orthologs #2041. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 T.nigroviridis:372

F6WAN9              	100.00%		H3DJY8              	100.00%
Bootstrap support for F6WAN9 as seed ortholog is 100%.
Bootstrap support for H3DJY8 as seed ortholog is 100%.

Group of orthologs #2042. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:318

F6ZSI5              	100.00%		H3DIK8              	100.00%
Bootstrap support for F6ZSI5 as seed ortholog is 99%.
Bootstrap support for H3DIK8 as seed ortholog is 100%.

Group of orthologs #2043. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:79

F6VH85              	100.00%		H3DLS8              	100.00%
                    	       		H3D1I0              	25.00%
                    	       		H3DN83              	16.60%
Bootstrap support for F6VH85 as seed ortholog is 100%.
Bootstrap support for H3DLS8 as seed ortholog is 98%.

Group of orthologs #2044. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:371

F7BFD3              	100.00%		H3DIN3              	100.00%
                    	       		H3DQR6              	16.59%
                    	       		H3CFX8              	10.34%
Bootstrap support for F7BFD3 as seed ortholog is 100%.
Bootstrap support for H3DIN3 as seed ortholog is 100%.

Group of orthologs #2045. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:371

F7BDS7              	100.00%		H3CA33              	100.00%
Bootstrap support for F7BDS7 as seed ortholog is 100%.
Bootstrap support for H3CA33 as seed ortholog is 100%.

Group of orthologs #2046. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:256

F6TJN1              	100.00%		H3DJ99              	100.00%
Bootstrap support for F6TJN1 as seed ortholog is 100%.
Bootstrap support for H3DJ99 as seed ortholog is 100%.

Group of orthologs #2047. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:371

H2XMQ8              	100.00%		H3CQ88              	100.00%
Bootstrap support for H2XMQ8 as seed ortholog is 100%.
Bootstrap support for H3CQ88 as seed ortholog is 100%.

Group of orthologs #2048. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:371

F6YLE1              	100.00%		H3DKG1              	100.00%
Bootstrap support for F6YLE1 as seed ortholog is 100%.
Bootstrap support for H3DKG1 as seed ortholog is 100%.

Group of orthologs #2049. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 T.nigroviridis:371

F6X0V6              	100.00%		Q4SS99              	100.00%
Bootstrap support for F6X0V6 as seed ortholog is 100%.
Bootstrap support for Q4SS99 as seed ortholog is 100%.

Group of orthologs #2050. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 T.nigroviridis:370

F6U637              	100.00%		H3D4H6              	100.00%
                    	       		H3BVU8              	10.46%
                    	       		H3D0L8              	7.98%
Bootstrap support for F6U637 as seed ortholog is 100%.
Bootstrap support for H3D4H6 as seed ortholog is 100%.

Group of orthologs #2051. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:254

F6QEH2              	100.00%		H3DLX4              	100.00%
                    	       		H3D120              	10.90%
Bootstrap support for F6QEH2 as seed ortholog is 100%.
Bootstrap support for H3DLX4 as seed ortholog is 100%.

Group of orthologs #2052. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 T.nigroviridis:370

F6TBB0              	100.00%		H3CB32              	100.00%
Bootstrap support for F6TBB0 as seed ortholog is 100%.
Bootstrap support for H3CB32 as seed ortholog is 100%.

Group of orthologs #2053. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 T.nigroviridis:370

F6Q7B5              	100.00%		H3CXT6              	100.00%
Bootstrap support for F6Q7B5 as seed ortholog is 100%.
Bootstrap support for H3CXT6 as seed ortholog is 100%.

Group of orthologs #2054. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:282

F6VSD5              	100.00%		H3CY41              	100.00%
Bootstrap support for F6VSD5 as seed ortholog is 100%.
Bootstrap support for H3CY41 as seed ortholog is 100%.

Group of orthologs #2055. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 T.nigroviridis:370

F7B5B2              	100.00%		H3CYH0              	100.00%
Bootstrap support for F7B5B2 as seed ortholog is 100%.
Bootstrap support for H3CYH0 as seed ortholog is 100%.

Group of orthologs #2056. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:39

F6YBW0              	100.00%		H3CKV3              	100.00%
                    	       		H3DD72              	18.02%
                    	       		H3D9A7              	17.73%
Bootstrap support for F6YBW0 as seed ortholog is 100%.
Bootstrap support for H3CKV3 as seed ortholog is 85%.

Group of orthologs #2057. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:106

F6XQX8              	100.00%		H3DK77              	100.00%
                    	       		H3C1K9              	5.19%
Bootstrap support for F6XQX8 as seed ortholog is 99%.
Bootstrap support for H3DK77 as seed ortholog is 99%.

Group of orthologs #2058. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:369

F6S7F2              	100.00%		H3CGL1              	100.00%
Bootstrap support for F6S7F2 as seed ortholog is 100%.
Bootstrap support for H3CGL1 as seed ortholog is 100%.

Group of orthologs #2059. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:369

F6T8R8              	100.00%		H3CLU5              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for H3CLU5 as seed ortholog is 100%.

Group of orthologs #2060. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:369

F6WBE1              	100.00%		H3CE53              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for H3CE53 as seed ortholog is 100%.

Group of orthologs #2061. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 T.nigroviridis:184

F7BAT7              	100.00%		H3CB35              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for H3CB35 as seed ortholog is 100%.

Group of orthologs #2062. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:369

H2XK01              	100.00%		H3CCX4              	100.00%
Bootstrap support for H2XK01 as seed ortholog is 100%.
Bootstrap support for H3CCX4 as seed ortholog is 100%.

Group of orthologs #2063. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:369

F6VWH1              	100.00%		H3D0M6              	100.00%
Bootstrap support for F6VWH1 as seed ortholog is 100%.
Bootstrap support for H3D0M6 as seed ortholog is 100%.

Group of orthologs #2064. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 T.nigroviridis:218

H2XR71              	100.00%		H3CCF0              	100.00%
Bootstrap support for H2XR71 as seed ortholog is 100%.
Bootstrap support for H3CCF0 as seed ortholog is 100%.

Group of orthologs #2065. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 T.nigroviridis:369

F7B8G2              	100.00%		Q4SNF6              	100.00%
Bootstrap support for F7B8G2 as seed ortholog is 100%.
Bootstrap support for Q4SNF6 as seed ortholog is 100%.

Group of orthologs #2066. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:125

F6URK3              	100.00%		H3CK87              	100.00%
                    	       		H3CR22              	39.86%
                    	       		H3D804              	34.60%
Bootstrap support for F6URK3 as seed ortholog is 100%.
Bootstrap support for H3CK87 as seed ortholog is 65%.
Alternative seed ortholog is H3CLZ7 (125 bits away from this cluster)

Group of orthologs #2067. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:79

F6YSB9              	100.00%		H3C5V3              	100.00%
                    	       		Q4SRI6              	75.79%
Bootstrap support for F6YSB9 as seed ortholog is 100%.
Bootstrap support for H3C5V3 as seed ortholog is 96%.

Group of orthologs #2068. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:305

H2XRS4              	100.00%		H3CYV3              	100.00%
                    	       		H3DGS1              	11.26%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for H3CYV3 as seed ortholog is 100%.

Group of orthologs #2069. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:368

F6WYE6              	100.00%		Q4SKK0              	100.00%
                    	       		H3CV89              	19.03%
Bootstrap support for F6WYE6 as seed ortholog is 100%.
Bootstrap support for Q4SKK0 as seed ortholog is 100%.

Group of orthologs #2070. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:368

F6TFE2              	100.00%		H3CQK2              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for H3CQK2 as seed ortholog is 100%.

Group of orthologs #2071. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:368

F6SF30              	100.00%		H3D287              	100.00%
Bootstrap support for F6SF30 as seed ortholog is 100%.
Bootstrap support for H3D287 as seed ortholog is 100%.

Group of orthologs #2072. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 T.nigroviridis:368

H2XX92              	100.00%		H3CYQ8              	100.00%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for H3CYQ8 as seed ortholog is 100%.

Group of orthologs #2073. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 T.nigroviridis:367

F6V7W7              	100.00%		H3CTY1              	100.00%
                    	       		H3BZQ3              	16.71%
                    	       		H3CP10              	14.56%
Bootstrap support for F6V7W7 as seed ortholog is 100%.
Bootstrap support for H3CTY1 as seed ortholog is 100%.

Group of orthologs #2074. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:3

F6T724              	100.00%		H3DDW6              	100.00%
F6T6J2              	9.23%		H3C982              	94.32%
Bootstrap support for F6T724 as seed ortholog is 55%.
Alternative seed ortholog is F6T6N4 (8 bits away from this cluster)
Bootstrap support for H3DDW6 as seed ortholog is 53%.
Alternative seed ortholog is H3DIQ5 (3 bits away from this cluster)

Group of orthologs #2075. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 T.nigroviridis:367

F6WEC1              	100.00%		H3CU26              	100.00%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for H3CU26 as seed ortholog is 100%.

Group of orthologs #2076. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 T.nigroviridis:367

F6Z7A9              	100.00%		H3DBT4              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for H3DBT4 as seed ortholog is 100%.

Group of orthologs #2077. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:280

H2XK45              	100.00%		H3CD71              	100.00%
                    	       		H3CWE8              	25.15%
                    	       		H3DGQ8              	24.18%
Bootstrap support for H2XK45 as seed ortholog is 100%.
Bootstrap support for H3CD71 as seed ortholog is 100%.

Group of orthologs #2078. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:366

F7BLL7              	100.00%		H3DL18              	100.00%
                    	       		H3DGD1              	37.83%
Bootstrap support for F7BLL7 as seed ortholog is 100%.
Bootstrap support for H3DL18 as seed ortholog is 100%.

Group of orthologs #2079. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:366

F6SSI8              	100.00%		H3D671              	100.00%
Bootstrap support for F6SSI8 as seed ortholog is 100%.
Bootstrap support for H3D671 as seed ortholog is 100%.

Group of orthologs #2080. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:148

F6U019              	100.00%		H3D466              	100.00%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for H3D466 as seed ortholog is 99%.

Group of orthologs #2081. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:366

F6ZZH3              	100.00%		H3CJE1              	100.00%
Bootstrap support for F6ZZH3 as seed ortholog is 100%.
Bootstrap support for H3CJE1 as seed ortholog is 100%.

Group of orthologs #2082. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:366

F6ZN43              	100.00%		H3DKN1              	100.00%
Bootstrap support for F6ZN43 as seed ortholog is 100%.
Bootstrap support for H3DKN1 as seed ortholog is 100%.

Group of orthologs #2083. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:305

F6XN50              	100.00%		Q4SMU1              	100.00%
Bootstrap support for F6XN50 as seed ortholog is 100%.
Bootstrap support for Q4SMU1 as seed ortholog is 100%.

Group of orthologs #2084. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:290

F6ZGS5              	100.00%		Q4S5D5              	100.00%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for Q4S5D5 as seed ortholog is 100%.

Group of orthologs #2085. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:366

F7A160              	100.00%		Q4SGZ4              	100.00%
Bootstrap support for F7A160 as seed ortholog is 100%.
Bootstrap support for Q4SGZ4 as seed ortholog is 100%.

Group of orthologs #2086. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 T.nigroviridis:366

H2XZ35              	100.00%		H3D390              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 100%.
Bootstrap support for H3D390 as seed ortholog is 100%.

Group of orthologs #2087. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 T.nigroviridis:365

F6RG39              	100.00%		H3C813              	100.00%
                    	       		H3CLY5              	84.14%
Bootstrap support for F6RG39 as seed ortholog is 100%.
Bootstrap support for H3C813 as seed ortholog is 100%.

Group of orthologs #2088. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 T.nigroviridis:365

F6X1E1              	100.00%		H3DP43              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for H3DP43 as seed ortholog is 100%.

Group of orthologs #2089. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 T.nigroviridis:364

H2XMH4              	100.00%		H3CE59              	100.00%
                    	       		H3DI87              	25.91%
Bootstrap support for H2XMH4 as seed ortholog is 100%.
Bootstrap support for H3CE59 as seed ortholog is 100%.

Group of orthologs #2090. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 T.nigroviridis:364

F7A515              	100.00%		H3CGW3              	100.00%
Bootstrap support for F7A515 as seed ortholog is 100%.
Bootstrap support for H3CGW3 as seed ortholog is 100%.

Group of orthologs #2091. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 T.nigroviridis:364

F7BF26              	100.00%		H3CBP2              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for H3CBP2 as seed ortholog is 100%.

Group of orthologs #2092. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:105

F7AQE7              	100.00%		H3CF28              	100.00%
Bootstrap support for F7AQE7 as seed ortholog is 100%.
Bootstrap support for H3CF28 as seed ortholog is 99%.

Group of orthologs #2093. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:253

H2XQ42              	100.00%		H3CH03              	100.00%
                    	       		H3CLW6              	37.68%
Bootstrap support for H2XQ42 as seed ortholog is 100%.
Bootstrap support for H3CH03 as seed ortholog is 100%.

Group of orthologs #2094. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:363

F6T065              	100.00%		H3DN85              	100.00%
                    	       		H3DFJ1              	33.10%
Bootstrap support for F6T065 as seed ortholog is 100%.
Bootstrap support for H3DN85 as seed ortholog is 100%.

Group of orthologs #2095. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:142

F6V899              	100.00%		H3DNQ7              	100.00%
                    	       		H3C8T5              	14.55%
Bootstrap support for F6V899 as seed ortholog is 100%.
Bootstrap support for H3DNQ7 as seed ortholog is 100%.

Group of orthologs #2096. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:248

F6PH64              	100.00%		H3C0Y4              	100.00%
Bootstrap support for F6PH64 as seed ortholog is 99%.
Bootstrap support for H3C0Y4 as seed ortholog is 100%.

Group of orthologs #2097. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:363

F6Q3Y2              	100.00%		H3CAR9              	100.00%
Bootstrap support for F6Q3Y2 as seed ortholog is 100%.
Bootstrap support for H3CAR9 as seed ortholog is 100%.

Group of orthologs #2098. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:363

F7B890              	100.00%		H3D3R0              	100.00%
Bootstrap support for F7B890 as seed ortholog is 100%.
Bootstrap support for H3D3R0 as seed ortholog is 100%.

Group of orthologs #2099. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:363

H2XXK6              	100.00%		H3CXL1              	100.00%
Bootstrap support for H2XXK6 as seed ortholog is 100%.
Bootstrap support for H3CXL1 as seed ortholog is 100%.

Group of orthologs #2100. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:300

H2XWF2              	100.00%		H3D444              	100.00%
Bootstrap support for H2XWF2 as seed ortholog is 100%.
Bootstrap support for H3D444 as seed ortholog is 100%.

Group of orthologs #2101. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 T.nigroviridis:363

H2XWD3              	100.00%		Q4SIH0              	100.00%
Bootstrap support for H2XWD3 as seed ortholog is 100%.
Bootstrap support for Q4SIH0 as seed ortholog is 100%.

Group of orthologs #2102. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 T.nigroviridis:279

F7BLG0              	100.00%		H3D8N1              	100.00%
                    	       		H3DHG4              	33.47%
Bootstrap support for F7BLG0 as seed ortholog is 100%.
Bootstrap support for H3D8N1 as seed ortholog is 100%.

Group of orthologs #2103. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 T.nigroviridis:362

F6UP98              	100.00%		H3CHG3              	100.00%
Bootstrap support for F6UP98 as seed ortholog is 100%.
Bootstrap support for H3CHG3 as seed ortholog is 100%.

Group of orthologs #2104. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 T.nigroviridis:362

F6ZQG8              	100.00%		H3C2A6              	100.00%
Bootstrap support for F6ZQG8 as seed ortholog is 100%.
Bootstrap support for H3C2A6 as seed ortholog is 100%.

Group of orthologs #2105. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 T.nigroviridis:362

F6YDK0              	100.00%		H3CBT8              	100.00%
Bootstrap support for F6YDK0 as seed ortholog is 100%.
Bootstrap support for H3CBT8 as seed ortholog is 100%.

Group of orthologs #2106. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 T.nigroviridis:190

F7ALU0              	100.00%		H3DF71              	100.00%
Bootstrap support for F7ALU0 as seed ortholog is 100%.
Bootstrap support for H3DF71 as seed ortholog is 99%.

Group of orthologs #2107. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:267

F6TZR8              	100.00%		H3CMV5              	100.00%
                    	       		H3C6I8              	21.79%
                    	       		H3DPH3              	14.40%
Bootstrap support for F6TZR8 as seed ortholog is 97%.
Bootstrap support for H3CMV5 as seed ortholog is 100%.

Group of orthologs #2108. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:153

F6QQK4              	100.00%		H3D4R0              	100.00%
                    	       		H3DPZ3              	29.02%
                    	       		H3C6N6              	28.73%
Bootstrap support for F6QQK4 as seed ortholog is 88%.
Bootstrap support for H3D4R0 as seed ortholog is 98%.

Group of orthologs #2109. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:19

F7AFI4              	100.00%		H3CX69              	100.00%
F6YCJ4              	52.55%		
F6YGS0              	18.88%		
Bootstrap support for F7AFI4 as seed ortholog is 100%.
Bootstrap support for H3CX69 as seed ortholog is 78%.

Group of orthologs #2110. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:131

F6VUH2              	100.00%		H3DL35              	100.00%
                    	       		H3CVV5              	18.71%
                    	       		H3CKY8              	14.62%
Bootstrap support for F6VUH2 as seed ortholog is 100%.
Bootstrap support for H3DL35 as seed ortholog is 100%.

Group of orthologs #2111. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6YW80              	100.00%		H3DDG7              	100.00%
                    	       		H3BVS7              	34.64%
                    	       		H3DKY5              	17.99%
Bootstrap support for F6YW80 as seed ortholog is 100%.
Bootstrap support for H3DDG7 as seed ortholog is 100%.

Group of orthologs #2112. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6RJ12              	100.00%		H3D045              	100.00%
                    	       		H3CQL3              	21.93%
Bootstrap support for F6RJ12 as seed ortholog is 100%.
Bootstrap support for H3D045 as seed ortholog is 100%.

Group of orthologs #2113. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:110

F6YVL2              	100.00%		H3CZC1              	100.00%
                    	       		H3BYD8              	35.17%
Bootstrap support for F6YVL2 as seed ortholog is 100%.
Bootstrap support for H3CZC1 as seed ortholog is 99%.

Group of orthologs #2114. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6S3Q7              	100.00%		H3CPG4              	100.00%
Bootstrap support for F6S3Q7 as seed ortholog is 100%.
Bootstrap support for H3CPG4 as seed ortholog is 100%.

Group of orthologs #2115. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:173

F6UUA2              	100.00%		H3CNW5              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for H3CNW5 as seed ortholog is 100%.

Group of orthologs #2116. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:270

F6W1C5              	100.00%		H3CLE0              	100.00%
Bootstrap support for F6W1C5 as seed ortholog is 100%.
Bootstrap support for H3CLE0 as seed ortholog is 100%.

Group of orthologs #2117. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6YM02              	100.00%		H3CGK5              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for H3CGK5 as seed ortholog is 100%.

Group of orthologs #2118. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6PQL4              	100.00%		H3DA39              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for H3DA39 as seed ortholog is 100%.

Group of orthologs #2119. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6XUX1              	100.00%		H3CN93              	100.00%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for H3CN93 as seed ortholog is 100%.

Group of orthologs #2120. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

F6T385              	100.00%		H3DKM1              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for H3DKM1 as seed ortholog is 100%.

Group of orthologs #2121. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

H2XP72              	100.00%		H3CUC0              	100.00%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for H3CUC0 as seed ortholog is 100%.

Group of orthologs #2122. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

H2XLD1              	100.00%		H3D5J9              	100.00%
Bootstrap support for H2XLD1 as seed ortholog is 100%.
Bootstrap support for H3D5J9 as seed ortholog is 100%.

Group of orthologs #2123. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 T.nigroviridis:361

H2XVS8              	100.00%		Q4RKM7              	100.00%
Bootstrap support for H2XVS8 as seed ortholog is 100%.
Bootstrap support for Q4RKM7 as seed ortholog is 100%.

Group of orthologs #2124. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:146

F7BFT5              	100.00%		H3CYP5              	100.00%
                    	       		Q4RL69              	73.89%
                    	       		H3DKI3              	32.08%
Bootstrap support for F7BFT5 as seed ortholog is 99%.
Bootstrap support for H3CYP5 as seed ortholog is 99%.

Group of orthologs #2125. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 T.nigroviridis:360

F7AXE7              	100.00%		H3CIV6              	100.00%
                    	       		H3CVE5              	62.55%
Bootstrap support for F7AXE7 as seed ortholog is 100%.
Bootstrap support for H3CIV6 as seed ortholog is 100%.

Group of orthologs #2126. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:33

F6SUA6              	100.00%		H3C894              	100.00%
Bootstrap support for F6SUA6 as seed ortholog is 99%.
Bootstrap support for H3C894 as seed ortholog is 80%.

Group of orthologs #2127. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:74

F6Y6M4              	100.00%		H3D9X9              	100.00%
Bootstrap support for F6Y6M4 as seed ortholog is 99%.
Bootstrap support for H3D9X9 as seed ortholog is 98%.

Group of orthologs #2128. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:128

F6WXG6              	100.00%		H3DPJ7              	100.00%
Bootstrap support for F6WXG6 as seed ortholog is 99%.
Bootstrap support for H3DPJ7 as seed ortholog is 99%.

Group of orthologs #2129. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:359

F6PYR8              	100.00%		H3CV22              	100.00%
                    	       		H3DIC8              	46.53%
                    	       		H3CWG8              	36.11%
Bootstrap support for F6PYR8 as seed ortholog is 100%.
Bootstrap support for H3CV22 as seed ortholog is 100%.

Group of orthologs #2130. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:359

Q4H3W9              	100.00%		H3D9R2              	100.00%
                    	       		H3CDW8              	29.06%
                    	       		H3CJM1              	14.97%
Bootstrap support for Q4H3W9 as seed ortholog is 100%.
Bootstrap support for H3D9R2 as seed ortholog is 100%.

Group of orthologs #2131. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:99

F6WSV3              	100.00%		H3CGV9              	100.00%
                    	       		H3CT31              	21.92%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for H3CGV9 as seed ortholog is 99%.

Group of orthologs #2132. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:359

H2XX66              	100.00%		H3DG21              	100.00%
                    	       		H3C0C8              	9.90%
Bootstrap support for H2XX66 as seed ortholog is 100%.
Bootstrap support for H3DG21 as seed ortholog is 100%.

Group of orthologs #2133. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:359

F6RLP1              	100.00%		H3D2E6              	100.00%
Bootstrap support for F6RLP1 as seed ortholog is 100%.
Bootstrap support for H3D2E6 as seed ortholog is 100%.

Group of orthologs #2134. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 T.nigroviridis:28

F7ARV5              	100.00%		H3CSU8              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 100%.
Bootstrap support for H3CSU8 as seed ortholog is 85%.

Group of orthologs #2135. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:359

F6ZYB8              	100.00%		H3CX65              	100.00%
Bootstrap support for F6ZYB8 as seed ortholog is 62%.
Alternative seed ortholog is F6RCP1 (18 bits away from this cluster)
Bootstrap support for H3CX65 as seed ortholog is 100%.

Group of orthologs #2136. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:359

F6SVK8              	100.00%		H3DL70              	100.00%
Bootstrap support for F6SVK8 as seed ortholog is 100%.
Bootstrap support for H3DL70 as seed ortholog is 100%.

Group of orthologs #2137. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:359

H2XP92              	100.00%		H3D1E5              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for H3D1E5 as seed ortholog is 100%.

Group of orthologs #2138. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 T.nigroviridis:359

H2Y124              	100.00%		H3CUW6              	100.00%
Bootstrap support for H2Y124 as seed ortholog is 100%.
Bootstrap support for H3CUW6 as seed ortholog is 100%.

Group of orthologs #2139. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:262

F6SBQ3              	100.00%		H3BZ63              	100.00%
                    	       		H3D3K0              	39.48%
Bootstrap support for F6SBQ3 as seed ortholog is 100%.
Bootstrap support for H3BZ63 as seed ortholog is 99%.

Group of orthologs #2140. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:358

F7AEU0              	100.00%		H3CN91              	100.00%
Q8T880              	100.00%		
Bootstrap support for F7AEU0 as seed ortholog is 100%.
Bootstrap support for Q8T880 as seed ortholog is 100%.
Bootstrap support for H3CN91 as seed ortholog is 100%.

Group of orthologs #2141. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:358

H2XQ34              	100.00%		H3DFT2              	100.00%
                    	       		H3C3S2              	44.35%
Bootstrap support for H2XQ34 as seed ortholog is 100%.
Bootstrap support for H3DFT2 as seed ortholog is 100%.

Group of orthologs #2142. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:294

F6PK54              	100.00%		H3CHN7              	100.00%
Bootstrap support for F6PK54 as seed ortholog is 100%.
Bootstrap support for H3CHN7 as seed ortholog is 100%.

Group of orthologs #2143. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:358

F6TUR1              	100.00%		H3D440              	100.00%
Bootstrap support for F6TUR1 as seed ortholog is 100%.
Bootstrap support for H3D440 as seed ortholog is 100%.

Group of orthologs #2144. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:120

F6X8P5              	100.00%		H3CX72              	100.00%
Bootstrap support for F6X8P5 as seed ortholog is 100%.
Bootstrap support for H3CX72 as seed ortholog is 97%.

Group of orthologs #2145. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 T.nigroviridis:247

Q6IMM2              	100.00%		H3CM89              	100.00%
Bootstrap support for Q6IMM2 as seed ortholog is 100%.
Bootstrap support for H3CM89 as seed ortholog is 100%.

Group of orthologs #2146. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 T.nigroviridis:358

H2XY13              	100.00%		H3DI00              	100.00%
Bootstrap support for H2XY13 as seed ortholog is 100%.
Bootstrap support for H3DI00 as seed ortholog is 100%.

Group of orthologs #2147. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6SA18              	100.00%		H3DE22              	100.00%
                    	       		H3CEY4              	7.85%
Bootstrap support for F6SA18 as seed ortholog is 100%.
Bootstrap support for H3DE22 as seed ortholog is 100%.

Group of orthologs #2148. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6S8B5              	100.00%		H3DF21              	100.00%
                    	       		H3D398              	20.09%
Bootstrap support for F6S8B5 as seed ortholog is 100%.
Bootstrap support for H3DF21 as seed ortholog is 100%.

Group of orthologs #2149. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6XS01              	100.00%		Q4SRP6              	100.00%
                    	       		H3D0R9              	12.55%
Bootstrap support for F6XS01 as seed ortholog is 100%.
Bootstrap support for Q4SRP6 as seed ortholog is 100%.

Group of orthologs #2150. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6QZY3              	100.00%		H3CGR6              	100.00%
Bootstrap support for F6QZY3 as seed ortholog is 100%.
Bootstrap support for H3CGR6 as seed ortholog is 100%.

Group of orthologs #2151. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6WPY5              	100.00%		H3CJ93              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for H3CJ93 as seed ortholog is 100%.

Group of orthologs #2152. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6UMP0              	100.00%		H3D4L4              	100.00%
Bootstrap support for F6UMP0 as seed ortholog is 100%.
Bootstrap support for H3D4L4 as seed ortholog is 100%.

Group of orthologs #2153. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F6YCP6              	100.00%		H3D7L8              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for H3D7L8 as seed ortholog is 100%.

Group of orthologs #2154. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:357

F7A8M5              	100.00%		H3D5G9              	100.00%
Bootstrap support for F7A8M5 as seed ortholog is 100%.
Bootstrap support for H3D5G9 as seed ortholog is 100%.

Group of orthologs #2155. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 T.nigroviridis:219

H2XY10              	100.00%		H3CG60              	100.00%
Bootstrap support for H2XY10 as seed ortholog is 100%.
Bootstrap support for H3CG60 as seed ortholog is 100%.

Group of orthologs #2156. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:99

F6ZXN6              	100.00%		H3DGA0              	100.00%
                    	       		H3DMR3              	27.40%
                    	       		H3DLL6              	21.35%
                    	       		H3DBT7              	16.90%
                    	       		H3D3G3              	5.34%
Bootstrap support for F6ZXN6 as seed ortholog is 90%.
Bootstrap support for H3DGA0 as seed ortholog is 98%.

Group of orthologs #2157. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:356

F6U6Z4              	100.00%		H3CVH0              	100.00%
                    	       		H3CKX9              	11.96%
Bootstrap support for F6U6Z4 as seed ortholog is 100%.
Bootstrap support for H3CVH0 as seed ortholog is 100%.

Group of orthologs #2158. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:110

H2XLH4              	100.00%		H3CPU0              	100.00%
                    	       		Q4RM36              	34.02%
Bootstrap support for H2XLH4 as seed ortholog is 100%.
Bootstrap support for H3CPU0 as seed ortholog is 100%.

Group of orthologs #2159. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:165

F6QQA0              	100.00%		H3CLK6              	100.00%
Bootstrap support for F6QQA0 as seed ortholog is 100%.
Bootstrap support for H3CLK6 as seed ortholog is 100%.

Group of orthologs #2160. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:356

F6QG73              	100.00%		H3D342              	100.00%
Bootstrap support for F6QG73 as seed ortholog is 100%.
Bootstrap support for H3D342 as seed ortholog is 100%.

Group of orthologs #2161. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:356

F7A1H6              	100.00%		H3CDP3              	100.00%
Bootstrap support for F7A1H6 as seed ortholog is 100%.
Bootstrap support for H3CDP3 as seed ortholog is 100%.

Group of orthologs #2162. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:162

F6ZTE1              	100.00%		H3D0U0              	100.00%
Bootstrap support for F6ZTE1 as seed ortholog is 100%.
Bootstrap support for H3D0U0 as seed ortholog is 99%.

Group of orthologs #2163. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:356

H2XK39              	100.00%		H3D2Q1              	100.00%
Bootstrap support for H2XK39 as seed ortholog is 100%.
Bootstrap support for H3D2Q1 as seed ortholog is 100%.

Group of orthologs #2164. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 T.nigroviridis:356

H2Y2L0              	100.00%		H3CZ90              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for H3CZ90 as seed ortholog is 100%.

Group of orthologs #2165. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:54

Q7YT79              	100.00%		H3D5R2              	100.00%
Bootstrap support for Q7YT79 as seed ortholog is 96%.
Bootstrap support for H3D5R2 as seed ortholog is 99%.

Group of orthologs #2166. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:176

F6QMD4              	100.00%		H3DGX9              	100.00%
                    	       		H3CHH4              	31.28%
                    	       		Q4RUG2              	13.22%
                    	       		H3DBP1              	10.13%
Bootstrap support for F6QMD4 as seed ortholog is 99%.
Bootstrap support for H3DGX9 as seed ortholog is 99%.

Group of orthologs #2167. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:115

F6XCQ7              	100.00%		H3D6M7              	100.00%
                    	       		Q4SBK4              	74.68%
                    	       		Q4S3D4              	72.15%
                    	       		Q4TGT4              	48.10%
Bootstrap support for F6XCQ7 as seed ortholog is 100%.
Bootstrap support for H3D6M7 as seed ortholog is 100%.

Group of orthologs #2168. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 T.nigroviridis:160

A7BK23              	100.00%		H3BY45              	100.00%
                    	       		H3C0K7              	38.12%
Bootstrap support for A7BK23 as seed ortholog is 100%.
Bootstrap support for H3BY45 as seed ortholog is 99%.

Group of orthologs #2169. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:223

F6XT60              	100.00%		H3D0L3              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 100%.
Bootstrap support for H3D0L3 as seed ortholog is 100%.

Group of orthologs #2170. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 T.nigroviridis:355

F7AWS8              	100.00%		H3CW45              	100.00%
Bootstrap support for F7AWS8 as seed ortholog is 100%.
Bootstrap support for H3CW45 as seed ortholog is 100%.

Group of orthologs #2171. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 T.nigroviridis:355

H2XWF9              	100.00%		H3D4W9              	100.00%
Bootstrap support for H2XWF9 as seed ortholog is 100%.
Bootstrap support for H3D4W9 as seed ortholog is 100%.

Group of orthologs #2172. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:72

F6TNW3              	100.00%		H3C9E6              	100.00%
F6WL19              	5.23%		
Bootstrap support for F6TNW3 as seed ortholog is 100%.
Bootstrap support for H3C9E6 as seed ortholog is 99%.

Group of orthologs #2173. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:131

F6QIP6              	100.00%		H3DN15              	100.00%
                    	       		H3DDH9              	29.79%
Bootstrap support for F6QIP6 as seed ortholog is 100%.
Bootstrap support for H3DN15 as seed ortholog is 99%.

Group of orthologs #2174. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

F7A5H4              	100.00%		H3CYB6              	100.00%
                    	       		H3DGX4              	19.88%
Bootstrap support for F7A5H4 as seed ortholog is 100%.
Bootstrap support for H3CYB6 as seed ortholog is 100%.

Group of orthologs #2175. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

F7B670              	100.00%		H3D004              	100.00%
                    	       		H3D1D1              	100.00%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for H3D004 as seed ortholog is 100%.
Bootstrap support for H3D1D1 as seed ortholog is 100%.

Group of orthologs #2176. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:191

L7N0U6              	100.00%		Q4S4T0              	100.00%
F6PS78              	98.72%		
Bootstrap support for L7N0U6 as seed ortholog is 100%.
Bootstrap support for Q4S4T0 as seed ortholog is 100%.

Group of orthologs #2177. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:297

F6USY8              	100.00%		H3CP68              	100.00%
Bootstrap support for F6USY8 as seed ortholog is 100%.
Bootstrap support for H3CP68 as seed ortholog is 100%.

Group of orthologs #2178. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:36

F6Q874              	100.00%		H3D6E7              	100.00%
Bootstrap support for F6Q874 as seed ortholog is 99%.
Bootstrap support for H3D6E7 as seed ortholog is 69%.
Alternative seed ortholog is H3CKU3 (36 bits away from this cluster)

Group of orthologs #2179. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

F6X8B5              	100.00%		H3CLC8              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for H3CLC8 as seed ortholog is 100%.

Group of orthologs #2180. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

F6Z0U1              	100.00%		H3CV73              	100.00%
Bootstrap support for F6Z0U1 as seed ortholog is 100%.
Bootstrap support for H3CV73 as seed ortholog is 100%.

Group of orthologs #2181. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:354

F6W2L5              	100.00%		H3DD41              	100.00%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for H3DD41 as seed ortholog is 100%.

Group of orthologs #2182. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

F6TIA8              	100.00%		H3DKZ9              	100.00%
Bootstrap support for F6TIA8 as seed ortholog is 100%.
Bootstrap support for H3DKZ9 as seed ortholog is 100%.

Group of orthologs #2183. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

F6SKY6              	100.00%		H3DNZ3              	100.00%
Bootstrap support for F6SKY6 as seed ortholog is 100%.
Bootstrap support for H3DNZ3 as seed ortholog is 100%.

Group of orthologs #2184. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 T.nigroviridis:354

H2Y1E6              	100.00%		H3DLL3              	100.00%
Bootstrap support for H2Y1E6 as seed ortholog is 100%.
Bootstrap support for H3DLL3 as seed ortholog is 100%.

Group of orthologs #2185. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

F6TAV4              	100.00%		H3CDT4              	100.00%
                    	       		H3DMK8              	29.04%
Bootstrap support for F6TAV4 as seed ortholog is 100%.
Bootstrap support for H3CDT4 as seed ortholog is 100%.

Group of orthologs #2186. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

Q1RLA5              	100.00%		Q4SMD2              	100.00%
                    	       		Q4S0J2              	59.84%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for Q4SMD2 as seed ortholog is 100%.

Group of orthologs #2187. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

F6URQ9              	100.00%		H3CGV3              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for H3CGV3 as seed ortholog is 100%.

Group of orthologs #2188. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

F6RN60              	100.00%		H3D3C7              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for H3D3C7 as seed ortholog is 100%.

Group of orthologs #2189. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

F7BIJ9              	100.00%		H3CB60              	100.00%
Bootstrap support for F7BIJ9 as seed ortholog is 100%.
Bootstrap support for H3CB60 as seed ortholog is 100%.

Group of orthologs #2190. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:100

F6RCT7              	100.00%		H3DHM5              	100.00%
Bootstrap support for F6RCT7 as seed ortholog is 100%.
Bootstrap support for H3DHM5 as seed ortholog is 99%.

Group of orthologs #2191. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

H2XN47              	100.00%		H3CES6              	100.00%
Bootstrap support for H2XN47 as seed ortholog is 100%.
Bootstrap support for H3CES6 as seed ortholog is 100%.

Group of orthologs #2192. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 T.nigroviridis:353

F6YPB3              	100.00%		H3D7G3              	100.00%
Bootstrap support for F6YPB3 as seed ortholog is 100%.
Bootstrap support for H3D7G3 as seed ortholog is 100%.

Group of orthologs #2193. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 T.nigroviridis:352

F6RQQ8              	100.00%		H3DB14              	100.00%
                    	       		H3DAY1              	17.63%
Bootstrap support for F6RQQ8 as seed ortholog is 100%.
Bootstrap support for H3DB14 as seed ortholog is 100%.

Group of orthologs #2194. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 T.nigroviridis:352

F6R8G4              	100.00%		H3CRG8              	100.00%
Bootstrap support for F6R8G4 as seed ortholog is 100%.
Bootstrap support for H3CRG8 as seed ortholog is 100%.

Group of orthologs #2195. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:32

F6T8Y3              	100.00%		Q4SZL9              	100.00%
Bootstrap support for F6T8Y3 as seed ortholog is 100%.
Bootstrap support for Q4SZL9 as seed ortholog is 83%.

Group of orthologs #2196. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 T.nigroviridis:352

F7BDK3              	100.00%		H3D4Z8              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for H3D4Z8 as seed ortholog is 100%.

Group of orthologs #2197. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:97

H2Y2X2              	100.00%		H3D9C6              	100.00%
F6U649              	17.00%		H3DL28              	59.32%
                    	       		H3D959              	49.86%
                    	       		H3CLD7              	23.29%
                    	       		H3CK04              	5.05%
Bootstrap support for H2Y2X2 as seed ortholog is 100%.
Bootstrap support for H3D9C6 as seed ortholog is 87%.

Group of orthologs #2198. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:351

F6QFM3              	100.00%		H3CUL3              	100.00%
                    	       		H3C359              	38.62%
                    	       		H3BWG5              	19.88%
Bootstrap support for F6QFM3 as seed ortholog is 100%.
Bootstrap support for H3CUL3 as seed ortholog is 100%.

Group of orthologs #2199. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:202

F6SAD5              	100.00%		H3CQ39              	100.00%
                    	       		H3CYD5              	18.64%
                    	       		H3CFQ8              	13.60%
Bootstrap support for F6SAD5 as seed ortholog is 100%.
Bootstrap support for H3CQ39 as seed ortholog is 100%.

Group of orthologs #2200. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:100

F6W2M8              	100.00%		Q4RZX5              	100.00%
                    	       		H3CTE2              	69.36%
                    	       		Q4SW55              	40.46%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for Q4RZX5 as seed ortholog is 99%.

Group of orthologs #2201. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:351

F6QQ49              	100.00%		H3CTC2              	100.00%
Bootstrap support for F6QQ49 as seed ortholog is 100%.
Bootstrap support for H3CTC2 as seed ortholog is 100%.

Group of orthologs #2202. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:151

F6XDD9              	100.00%		H3CZU6              	100.00%
Bootstrap support for F6XDD9 as seed ortholog is 100%.
Bootstrap support for H3CZU6 as seed ortholog is 99%.

Group of orthologs #2203. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:351

F7AEB8              	100.00%		H3CQG1              	100.00%
Bootstrap support for F7AEB8 as seed ortholog is 100%.
Bootstrap support for H3CQG1 as seed ortholog is 100%.

Group of orthologs #2204. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:351

F6WFL4              	100.00%		H3D5C1              	100.00%
Bootstrap support for F6WFL4 as seed ortholog is 100%.
Bootstrap support for H3D5C1 as seed ortholog is 100%.

Group of orthologs #2205. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:351

F6ZCY4              	100.00%		H3DBL4              	100.00%
Bootstrap support for F6ZCY4 as seed ortholog is 100%.
Bootstrap support for H3DBL4 as seed ortholog is 100%.

Group of orthologs #2206. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 T.nigroviridis:351

H2Y3F1              	100.00%		H3CHS3              	100.00%
Bootstrap support for H2Y3F1 as seed ortholog is 100%.
Bootstrap support for H3CHS3 as seed ortholog is 100%.

Group of orthologs #2207. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:111

F6ZV29              	100.00%		H3DL87              	100.00%
Bootstrap support for F6ZV29 as seed ortholog is 99%.
Bootstrap support for H3DL87 as seed ortholog is 99%.

Group of orthologs #2208. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 T.nigroviridis:350

F6SPY1              	100.00%		H3D6Y4              	100.00%
                    	       		H3D266              	8.19%
Bootstrap support for F6SPY1 as seed ortholog is 100%.
Bootstrap support for H3D6Y4 as seed ortholog is 100%.

Group of orthologs #2209. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 T.nigroviridis:350

F6U936              	100.00%		H3C4S4              	100.00%
Bootstrap support for F6U936 as seed ortholog is 100%.
Bootstrap support for H3C4S4 as seed ortholog is 100%.

Group of orthologs #2210. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:235

F6RY16              	100.00%		H3DFA3              	100.00%
Bootstrap support for F6RY16 as seed ortholog is 99%.
Bootstrap support for H3DFA3 as seed ortholog is 100%.

Group of orthologs #2211. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 T.nigroviridis:350

F6YIX5              	100.00%		H3D1D3              	100.00%
Bootstrap support for F6YIX5 as seed ortholog is 100%.
Bootstrap support for H3D1D3 as seed ortholog is 100%.

Group of orthologs #2212. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 T.nigroviridis:350

F7AUJ8              	100.00%		H3D1Z6              	100.00%
Bootstrap support for F7AUJ8 as seed ortholog is 96%.
Bootstrap support for H3D1Z6 as seed ortholog is 100%.

Group of orthologs #2213. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 T.nigroviridis:350

F6XER0              	100.00%		H3DGW0              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for H3DGW0 as seed ortholog is 100%.

Group of orthologs #2214. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 T.nigroviridis:350

F7ACG4              	100.00%		H3DPG8              	100.00%
Bootstrap support for F7ACG4 as seed ortholog is 100%.
Bootstrap support for H3DPG8 as seed ortholog is 100%.

Group of orthologs #2215. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 T.nigroviridis:349

F6PV66              	100.00%		H3CFT7              	100.00%
                    	       		H3D2G3              	6.57%
Bootstrap support for F6PV66 as seed ortholog is 100%.
Bootstrap support for H3CFT7 as seed ortholog is 100%.

Group of orthologs #2216. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:280

F7ART8              	100.00%		H3CSB2              	100.00%
Bootstrap support for F7ART8 as seed ortholog is 100%.
Bootstrap support for H3CSB2 as seed ortholog is 100%.

Group of orthologs #2217. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:202

F6TFC4              	100.00%		H3DMV2              	100.00%
Bootstrap support for F6TFC4 as seed ortholog is 100%.
Bootstrap support for H3DMV2 as seed ortholog is 100%.

Group of orthologs #2218. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 T.nigroviridis:218

F7B418              	100.00%		H3DLE3              	100.00%
Bootstrap support for F7B418 as seed ortholog is 100%.
Bootstrap support for H3DLE3 as seed ortholog is 100%.

Group of orthologs #2219. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 T.nigroviridis:349

H2XYL3              	100.00%		Q4SUD1              	100.00%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for Q4SUD1 as seed ortholog is 100%.

Group of orthologs #2220. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 T.nigroviridis:348

F6UPC7              	100.00%		H3C3Z9              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for H3C3Z9 as seed ortholog is 100%.

Group of orthologs #2221. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 T.nigroviridis:348

F6Y7V1              	100.00%		H3C9Z4              	100.00%
Bootstrap support for F6Y7V1 as seed ortholog is 100%.
Bootstrap support for H3C9Z4 as seed ortholog is 100%.

Group of orthologs #2222. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 T.nigroviridis:348

F6Z326              	100.00%		H3D9U3              	100.00%
Bootstrap support for F6Z326 as seed ortholog is 100%.
Bootstrap support for H3D9U3 as seed ortholog is 100%.

Group of orthologs #2223. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:268

Q1RL41              	100.00%		H3DGH6              	100.00%
Bootstrap support for Q1RL41 as seed ortholog is 100%.
Bootstrap support for H3DGH6 as seed ortholog is 100%.

Group of orthologs #2224. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:248

F6R8N5              	100.00%		H3D0Y7              	100.00%
                    	       		H3DMW6              	28.89%
                    	       		H3CGE3              	6.29%
Bootstrap support for F6R8N5 as seed ortholog is 95%.
Bootstrap support for H3D0Y7 as seed ortholog is 100%.

Group of orthologs #2225. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 T.nigroviridis:90

H2Y1F3              	100.00%		H3CFT2              	100.00%
                    	       		H3D3U1              	7.99%
                    	       		H3D1F6              	6.73%
Bootstrap support for H2Y1F3 as seed ortholog is 55%.
Alternative seed ortholog is F6SIL2 (22 bits away from this cluster)
Bootstrap support for H3CFT2 as seed ortholog is 99%.

Group of orthologs #2226. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 T.nigroviridis:347

Q4H396              	100.00%		H3DMY5              	100.00%
                    	       		H3DKL1              	18.30%
Bootstrap support for Q4H396 as seed ortholog is 100%.
Bootstrap support for H3DMY5 as seed ortholog is 100%.

Group of orthologs #2227. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:229

F6WAG8              	100.00%		H3CTD2              	100.00%
Bootstrap support for F6WAG8 as seed ortholog is 100%.
Bootstrap support for H3CTD2 as seed ortholog is 100%.

Group of orthologs #2228. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 T.nigroviridis:347

F6QL17              	100.00%		Q4SF74              	100.00%
Bootstrap support for F6QL17 as seed ortholog is 100%.
Bootstrap support for Q4SF74 as seed ortholog is 100%.

Group of orthologs #2229. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 T.nigroviridis:179

F6Y7E9              	100.00%		Q4SMV9              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for Q4SMV9 as seed ortholog is 100%.

Group of orthologs #2230. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:6

H2XWP0              	100.00%		Q4SBL3              	100.00%
Bootstrap support for H2XWP0 as seed ortholog is 100%.
Bootstrap support for Q4SBL3 as seed ortholog is 62%.
Alternative seed ortholog is Q4RL52 (6 bits away from this cluster)

Group of orthologs #2231. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 T.nigroviridis:347

H2Y0A5              	100.00%		Q4SGI0              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for Q4SGI0 as seed ortholog is 100%.

Group of orthologs #2232. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F7B779              	100.00%		H3CPI1              	100.00%
                    	       		H3DME5              	38.33%
                    	       		H3CPA4              	28.69%
Bootstrap support for F7B779 as seed ortholog is 100%.
Bootstrap support for H3CPI1 as seed ortholog is 100%.

Group of orthologs #2233. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:96

F6YI37              	100.00%		H3D5E1              	100.00%
F6ST69              	18.04%		H3CXM3              	6.57%
Bootstrap support for F6YI37 as seed ortholog is 89%.
Bootstrap support for H3D5E1 as seed ortholog is 98%.

Group of orthologs #2234. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 T.nigroviridis:197

F6T5A7              	100.00%		H3CMP2              	100.00%
F6RBM9              	73.27%		
Bootstrap support for F6T5A7 as seed ortholog is 56%.
Alternative seed ortholog is F6RID1 (7 bits away from this cluster)
Bootstrap support for H3CMP2 as seed ortholog is 100%.

Group of orthologs #2235. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:195

F6V304              	100.00%		H3CVP1              	100.00%
                    	       		H3CQV9              	25.27%
Bootstrap support for F6V304 as seed ortholog is 100%.
Bootstrap support for H3CVP1 as seed ortholog is 100%.

Group of orthologs #2236. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:37

H2XYB1              	100.00%		H3CXL7              	100.00%
                    	       		H3DFW9              	5.04%
Bootstrap support for H2XYB1 as seed ortholog is 100%.
Bootstrap support for H3CXL7 as seed ortholog is 84%.

Group of orthologs #2237. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:72

Q4H308              	100.00%		H3DF57              	100.00%
                    	       		H3DC48              	46.19%
Bootstrap support for Q4H308 as seed ortholog is 99%.
Bootstrap support for H3DF57 as seed ortholog is 95%.

Group of orthologs #2238. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F6T310              	100.00%		H3CSP7              	100.00%
Bootstrap support for F6T310 as seed ortholog is 100%.
Bootstrap support for H3CSP7 as seed ortholog is 100%.

Group of orthologs #2239. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F7B006              	100.00%		H3BXW3              	100.00%
Bootstrap support for F7B006 as seed ortholog is 100%.
Bootstrap support for H3BXW3 as seed ortholog is 100%.

Group of orthologs #2240. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:160

F6UJQ6              	100.00%		H3D3I3              	100.00%
Bootstrap support for F6UJQ6 as seed ortholog is 100%.
Bootstrap support for H3D3I3 as seed ortholog is 100%.

Group of orthologs #2241. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F6TE09              	100.00%		H3DG82              	100.00%
Bootstrap support for F6TE09 as seed ortholog is 100%.
Bootstrap support for H3DG82 as seed ortholog is 100%.

Group of orthologs #2242. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F6X618              	100.00%		H3D509              	100.00%
Bootstrap support for F6X618 as seed ortholog is 100%.
Bootstrap support for H3D509 as seed ortholog is 100%.

Group of orthologs #2243. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F6S6A5              	100.00%		H3DPG0              	100.00%
Bootstrap support for F6S6A5 as seed ortholog is 100%.
Bootstrap support for H3DPG0 as seed ortholog is 100%.

Group of orthologs #2244. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F6VII3              	100.00%		H3DMG8              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for H3DMG8 as seed ortholog is 100%.

Group of orthologs #2245. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 T.nigroviridis:346

F6ZB45              	100.00%		H3DCV2              	100.00%
Bootstrap support for F6ZB45 as seed ortholog is 100%.
Bootstrap support for H3DCV2 as seed ortholog is 100%.

Group of orthologs #2246. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:129

F6RGL3              	100.00%		H3CZU7              	100.00%
                    	       		H3DMI9              	14.98%
Bootstrap support for F6RGL3 as seed ortholog is 100%.
Bootstrap support for H3CZU7 as seed ortholog is 99%.

Group of orthologs #2247. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:40

F6VVA7              	100.00%		H3CPU1              	100.00%
                    	       		H3DIZ1              	20.96%
Bootstrap support for F6VVA7 as seed ortholog is 100%.
Bootstrap support for H3CPU1 as seed ortholog is 93%.

Group of orthologs #2248. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 T.nigroviridis:345

F7ABL1              	100.00%		H3CX19              	100.00%
Bootstrap support for F7ABL1 as seed ortholog is 100%.
Bootstrap support for H3CX19 as seed ortholog is 100%.

Group of orthologs #2249. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:257

H2XPL6              	100.00%		H3DPN6              	100.00%
Bootstrap support for H2XPL6 as seed ortholog is 100%.
Bootstrap support for H3DPN6 as seed ortholog is 100%.

Group of orthologs #2250. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 T.nigroviridis:239

F6UHX2              	100.00%		H3CYD7              	100.00%
Bootstrap support for F6UHX2 as seed ortholog is 100%.
Bootstrap support for H3CYD7 as seed ortholog is 100%.

Group of orthologs #2251. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 T.nigroviridis:344

H2XPK8              	100.00%		H3C7U5              	100.00%
Bootstrap support for H2XPK8 as seed ortholog is 100%.
Bootstrap support for H3C7U5 as seed ortholog is 100%.

Group of orthologs #2252. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 T.nigroviridis:344

F6ZLN5              	100.00%		H3D017              	100.00%
Bootstrap support for F6ZLN5 as seed ortholog is 100%.
Bootstrap support for H3D017 as seed ortholog is 100%.

Group of orthologs #2253. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:156

H2Y1B2              	100.00%		H3CCT6              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 100%.
Bootstrap support for H3CCT6 as seed ortholog is 100%.

Group of orthologs #2254. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 T.nigroviridis:292

F6YAA4              	100.00%		H3DJE5              	100.00%
Bootstrap support for F6YAA4 as seed ortholog is 100%.
Bootstrap support for H3DJE5 as seed ortholog is 100%.

Group of orthologs #2255. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6QWP6              	100.00%		H3CRV1              	100.00%
                    	       		H3D0I9              	29.66%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for H3CRV1 as seed ortholog is 100%.

Group of orthologs #2256. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6WYT3              	100.00%		H3CGV0              	100.00%
H2XRA0              	5.28%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for H3CGV0 as seed ortholog is 100%.

Group of orthologs #2257. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:180

F6R3W0              	100.00%		H3DHF1              	100.00%
                    	       		Q4RVC5              	13.75%
Bootstrap support for F6R3W0 as seed ortholog is 100%.
Bootstrap support for H3DHF1 as seed ortholog is 100%.

Group of orthologs #2258. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

H2XM46              	100.00%		H3CA31              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for H3CA31 as seed ortholog is 100%.

Group of orthologs #2259. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6VU73              	100.00%		H3D1E8              	100.00%
Bootstrap support for F6VU73 as seed ortholog is 100%.
Bootstrap support for H3D1E8 as seed ortholog is 100%.

Group of orthologs #2260. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6S578              	100.00%		H3DDK7              	100.00%
Bootstrap support for F6S578 as seed ortholog is 100%.
Bootstrap support for H3DDK7 as seed ortholog is 100%.

Group of orthologs #2261. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6RPW8              	100.00%		H3DHR2              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for H3DHR2 as seed ortholog is 100%.

Group of orthologs #2262. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6TXN5              	100.00%		H3DBL1              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for H3DBL1 as seed ortholog is 100%.

Group of orthologs #2263. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:95

F6UBJ3              	100.00%		H3DA34              	100.00%
Bootstrap support for F6UBJ3 as seed ortholog is 100%.
Bootstrap support for H3DA34 as seed ortholog is 99%.

Group of orthologs #2264. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:343

F6S4C0              	100.00%		H3DM17              	100.00%
Bootstrap support for F6S4C0 as seed ortholog is 100%.
Bootstrap support for H3DM17 as seed ortholog is 100%.

Group of orthologs #2265. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 T.nigroviridis:343

F7AZT4              	100.00%		H3DBU5              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 100%.
Bootstrap support for H3DBU5 as seed ortholog is 100%.

Group of orthologs #2266. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 T.nigroviridis:194

F7BDH1              	100.00%		H3DHV4              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for H3DHV4 as seed ortholog is 99%.

Group of orthologs #2267. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:69

F6PH03              	100.00%		H3CNQ6              	100.00%
                    	       		H3CYP9              	51.64%
                    	       		H3C4L0              	21.71%
                    	       		H3CVJ9              	15.38%
                    	       		H3CD58              	11.84%
                    	       		H3DKS3              	7.98%
                    	       		H3C3S3              	7.65%
Bootstrap support for F6PH03 as seed ortholog is 100%.
Bootstrap support for H3CNQ6 as seed ortholog is 99%.

Group of orthologs #2268. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:342

F6W4G9              	100.00%		H3D1J1              	100.00%
                    	       		H3D7H4              	64.14%
                    	       		H3D6D2              	15.57%
Bootstrap support for F6W4G9 as seed ortholog is 100%.
Bootstrap support for H3D1J1 as seed ortholog is 100%.

Group of orthologs #2269. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 T.nigroviridis:41

F7B262              	100.00%		H3C622              	100.00%
                    	       		H3DMV0              	15.44%
Bootstrap support for F7B262 as seed ortholog is 52%.
Alternative seed ortholog is F7ACE2 (5 bits away from this cluster)
Bootstrap support for H3C622 as seed ortholog is 79%.

Group of orthologs #2270. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:142

F6WK17              	100.00%		H3D3E8              	100.00%
                    	       		H3D965              	7.55%
Bootstrap support for F6WK17 as seed ortholog is 100%.
Bootstrap support for H3D3E8 as seed ortholog is 99%.

Group of orthologs #2271. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 T.nigroviridis:177

H2XY76              	100.00%		H3CQN7              	100.00%
                    	       		H3DJY9              	23.16%
Bootstrap support for H2XY76 as seed ortholog is 100%.
Bootstrap support for H3CQN7 as seed ortholog is 100%.

Group of orthologs #2272. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:342

F6R035              	100.00%		H3C3W5              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for H3C3W5 as seed ortholog is 100%.

Group of orthologs #2273. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:342

F6RID7              	100.00%		H3CCU2              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for H3CCU2 as seed ortholog is 100%.

Group of orthologs #2274. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:342

F6ZUH0              	100.00%		H3CIW8              	100.00%
Bootstrap support for F6ZUH0 as seed ortholog is 100%.
Bootstrap support for H3CIW8 as seed ortholog is 100%.

Group of orthologs #2275. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 T.nigroviridis:342

F6WSZ0              	100.00%		H3D9W0              	100.00%
Bootstrap support for F6WSZ0 as seed ortholog is 100%.
Bootstrap support for H3D9W0 as seed ortholog is 100%.

Group of orthologs #2276. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:341

F7AZQ8              	100.00%		H3C4T1              	100.00%
                    	       		H3D0I4              	43.80%
                    	       		H3BWJ6              	35.94%
Bootstrap support for F7AZQ8 as seed ortholog is 100%.
Bootstrap support for H3C4T1 as seed ortholog is 100%.

Group of orthologs #2277. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:90

F6QI83              	100.00%		H3CB72              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for H3CB72 as seed ortholog is 98%.

Group of orthologs #2278. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:341

F6VYZ5              	100.00%		H3C214              	100.00%
Bootstrap support for F6VYZ5 as seed ortholog is 99%.
Bootstrap support for H3C214 as seed ortholog is 100%.

Group of orthologs #2279. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:52

F6RC25              	100.00%		H3CR86              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for H3CR86 as seed ortholog is 94%.

Group of orthologs #2280. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:341

H2XWU7              	100.00%		H3CCW5              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for H3CCW5 as seed ortholog is 100%.

Group of orthologs #2281. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:228

H2XJG5              	100.00%		H3CVY6              	100.00%
Bootstrap support for H2XJG5 as seed ortholog is 99%.
Bootstrap support for H3CVY6 as seed ortholog is 100%.

Group of orthologs #2282. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:341

F7AWQ7              	100.00%		H3CZI5              	100.00%
Bootstrap support for F7AWQ7 as seed ortholog is 100%.
Bootstrap support for H3CZI5 as seed ortholog is 100%.

Group of orthologs #2283. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:341

F6YX11              	100.00%		H3DAT4              	100.00%
Bootstrap support for F6YX11 as seed ortholog is 100%.
Bootstrap support for H3DAT4 as seed ortholog is 100%.

Group of orthologs #2284. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:341

F7BFF4              	100.00%		H3D7M2              	100.00%
Bootstrap support for F7BFF4 as seed ortholog is 100%.
Bootstrap support for H3D7M2 as seed ortholog is 100%.

Group of orthologs #2285. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:341

F6WH82              	100.00%		Q4RSM0              	100.00%
Bootstrap support for F6WH82 as seed ortholog is 100%.
Bootstrap support for Q4RSM0 as seed ortholog is 100%.

Group of orthologs #2286. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 T.nigroviridis:281

F7B3X8              	100.00%		H3DFU8              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for H3DFU8 as seed ortholog is 100%.

Group of orthologs #2287. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 T.nigroviridis:35

Q7YT82              	100.00%		Q4RXL7              	100.00%
                    	       		Q4SWJ4              	100.00%
                    	       		Q4RW89              	44.44%
                    	       		H3DLP6              	38.89%
Bootstrap support for Q7YT82 as seed ortholog is 100%.
Bootstrap support for Q4RXL7 as seed ortholog is 97%.
Bootstrap support for Q4SWJ4 as seed ortholog is 96%.

Group of orthologs #2288. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:216

F7BF76              	100.00%		H3CW41              	100.00%
                    	       		H3CAC8              	45.11%
                    	       		H3D0B4              	33.73%
Bootstrap support for F7BF76 as seed ortholog is 99%.
Bootstrap support for H3CW41 as seed ortholog is 100%.

Group of orthologs #2289. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:207

F6QBH7              	100.00%		H3CV83              	100.00%
                    	       		H3CV87              	5.69%
Bootstrap support for F6QBH7 as seed ortholog is 100%.
Bootstrap support for H3CV83 as seed ortholog is 100%.

Group of orthologs #2290. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:340

F6SKK8              	100.00%		H3DPM1              	100.00%
                    	       		Q4REN9              	83.55%
Bootstrap support for F6SKK8 as seed ortholog is 100%.
Bootstrap support for H3DPM1 as seed ortholog is 100%.

Group of orthologs #2291. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:202

F6ZZP5              	100.00%		H3DH39              	100.00%
                    	       		H3CBU2              	33.33%
Bootstrap support for F6ZZP5 as seed ortholog is 100%.
Bootstrap support for H3DH39 as seed ortholog is 100%.

Group of orthologs #2292. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:340

F7A7A0              	100.00%		Q4RK97              	100.00%
                    	       		H3D9N7              	18.48%
Bootstrap support for F7A7A0 as seed ortholog is 100%.
Bootstrap support for Q4RK97 as seed ortholog is 100%.

Group of orthologs #2293. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 T.nigroviridis:248

H2XXA8              	100.00%		H3CA76              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 100%.
Bootstrap support for H3CA76 as seed ortholog is 100%.

Group of orthologs #2294. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:340

F6Z8S6              	100.00%		H3D516              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 100%.
Bootstrap support for H3D516 as seed ortholog is 100%.

Group of orthologs #2295. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:340

F6VI10              	100.00%		H3DNZ7              	100.00%
Bootstrap support for F6VI10 as seed ortholog is 100%.
Bootstrap support for H3DNZ7 as seed ortholog is 100%.

Group of orthologs #2296. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 T.nigroviridis:340

H2Y2N2              	100.00%		H3DD25              	100.00%
Bootstrap support for H2Y2N2 as seed ortholog is 100%.
Bootstrap support for H3DD25 as seed ortholog is 100%.

Group of orthologs #2297. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

F6XH93              	100.00%		H3CYM0              	100.00%
                    	       		H3CXI7              	21.34%
                    	       		H3CKV4              	9.15%
Bootstrap support for F6XH93 as seed ortholog is 100%.
Bootstrap support for H3CYM0 as seed ortholog is 100%.

Group of orthologs #2298. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

F6T886              	100.00%		H3DH20              	100.00%
F7AUB9              	46.21%		
F7BDU0              	22.99%		
Bootstrap support for F6T886 as seed ortholog is 100%.
Bootstrap support for H3DH20 as seed ortholog is 100%.

Group of orthologs #2299. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:90

F7B369              	100.00%		H3CCL2              	100.00%
                    	       		H3DCZ5              	18.67%
Bootstrap support for F7B369 as seed ortholog is 100%.
Bootstrap support for H3CCL2 as seed ortholog is 99%.

Group of orthologs #2300. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

F6PWD4              	100.00%		H3D2H0              	100.00%
Bootstrap support for F6PWD4 as seed ortholog is 100%.
Bootstrap support for H3D2H0 as seed ortholog is 100%.

Group of orthologs #2301. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

F6W282              	100.00%		H3CJR5              	100.00%
Bootstrap support for F6W282 as seed ortholog is 100%.
Bootstrap support for H3CJR5 as seed ortholog is 100%.

Group of orthologs #2302. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:339

F7B391              	100.00%		H3C3T4              	100.00%
Bootstrap support for F7B391 as seed ortholog is 100%.
Bootstrap support for H3C3T4 as seed ortholog is 100%.

Group of orthologs #2303. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

F6S1A9              	100.00%		H3DAG3              	100.00%
Bootstrap support for F6S1A9 as seed ortholog is 100%.
Bootstrap support for H3DAG3 as seed ortholog is 100%.

Group of orthologs #2304. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:285

F6WFK7              	100.00%		H3DBE8              	100.00%
Bootstrap support for F6WFK7 as seed ortholog is 100%.
Bootstrap support for H3DBE8 as seed ortholog is 100%.

Group of orthologs #2305. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:227

H2XW45              	100.00%		H3CPF8              	100.00%
Bootstrap support for H2XW45 as seed ortholog is 100%.
Bootstrap support for H3CPF8 as seed ortholog is 100%.

Group of orthologs #2306. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

F7AZS2              	100.00%		H3DNQ8              	100.00%
Bootstrap support for F7AZS2 as seed ortholog is 100%.
Bootstrap support for H3DNQ8 as seed ortholog is 100%.

Group of orthologs #2307. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

H2XKC9              	100.00%		H3DQ39              	100.00%
Bootstrap support for H2XKC9 as seed ortholog is 100%.
Bootstrap support for H3DQ39 as seed ortholog is 100%.

Group of orthologs #2308. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 T.nigroviridis:339

H2Y079              	100.00%		H3D6P9              	100.00%
Bootstrap support for H2Y079 as seed ortholog is 100%.
Bootstrap support for H3D6P9 as seed ortholog is 100%.

Group of orthologs #2309. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:293

F6PP61              	100.00%		H3CIJ2              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for H3CIJ2 as seed ortholog is 100%.

Group of orthologs #2310. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 T.nigroviridis:338

F6PHT6              	100.00%		H3DHS7              	100.00%
Bootstrap support for F6PHT6 as seed ortholog is 100%.
Bootstrap support for H3DHS7 as seed ortholog is 100%.

Group of orthologs #2311. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 T.nigroviridis:338

F7AA18              	100.00%		H3CNW2              	100.00%
Bootstrap support for F7AA18 as seed ortholog is 100%.
Bootstrap support for H3CNW2 as seed ortholog is 100%.

Group of orthologs #2312. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 T.nigroviridis:338

F7B314              	100.00%		H3CM13              	100.00%
Bootstrap support for F7B314 as seed ortholog is 100%.
Bootstrap support for H3CM13 as seed ortholog is 100%.

Group of orthologs #2313. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 T.nigroviridis:338

F6ZYE8              	100.00%		H3D401              	100.00%
Bootstrap support for F6ZYE8 as seed ortholog is 100%.
Bootstrap support for H3D401 as seed ortholog is 100%.

Group of orthologs #2314. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 T.nigroviridis:338

F6VF53              	100.00%		Q4S374              	100.00%
Bootstrap support for F6VF53 as seed ortholog is 100%.
Bootstrap support for Q4S374 as seed ortholog is 100%.

Group of orthologs #2315. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F6XQS7              	100.00%		H3CQF2              	100.00%
                    	       		H3D0X1              	53.00%
                    	       		H3CLF4              	6.21%
                    	       		H3D0U1              	5.18%
Bootstrap support for F6XQS7 as seed ortholog is 100%.
Bootstrap support for H3CQF2 as seed ortholog is 100%.

Group of orthologs #2316. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:167

F6REF5              	100.00%		Q4REY8              	100.00%
F6XGI2              	30.52%		H3D8G6              	19.69%
                    	       		H3CK32              	14.46%
Bootstrap support for F6REF5 as seed ortholog is 93%.
Bootstrap support for Q4REY8 as seed ortholog is 100%.

Group of orthologs #2317. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:252

F6YVN9              	100.00%		H3CKN5              	100.00%
                    	       		H3C1A7              	30.92%
Bootstrap support for F6YVN9 as seed ortholog is 100%.
Bootstrap support for H3CKN5 as seed ortholog is 100%.

Group of orthologs #2318. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

H2XQJ7              	100.00%		H3D3L6              	100.00%
                    	       		H3D8H7              	19.74%
Bootstrap support for H2XQJ7 as seed ortholog is 100%.
Bootstrap support for H3D3L6 as seed ortholog is 100%.

Group of orthologs #2319. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F6Q4Z2              	100.00%		H3C0G0              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for H3C0G0 as seed ortholog is 100%.

Group of orthologs #2320. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F6V9C5              	100.00%		H3CHU8              	100.00%
Bootstrap support for F6V9C5 as seed ortholog is 100%.
Bootstrap support for H3CHU8 as seed ortholog is 100%.

Group of orthologs #2321. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F7A1T4              	100.00%		H3CAT0              	100.00%
Bootstrap support for F7A1T4 as seed ortholog is 100%.
Bootstrap support for H3CAT0 as seed ortholog is 100%.

Group of orthologs #2322. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F6WRK0              	100.00%		H3CUM8              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for H3CUM8 as seed ortholog is 100%.

Group of orthologs #2323. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F6YIU9              	100.00%		H3CSM4              	100.00%
Bootstrap support for F6YIU9 as seed ortholog is 100%.
Bootstrap support for H3CSM4 as seed ortholog is 100%.

Group of orthologs #2324. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

F6TWS7              	100.00%		H3DME7              	100.00%
Bootstrap support for F6TWS7 as seed ortholog is 100%.
Bootstrap support for H3DME7 as seed ortholog is 100%.

Group of orthologs #2325. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 T.nigroviridis:337

Q4H3E2              	100.00%		H3DFD7              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for H3DFD7 as seed ortholog is 100%.

Group of orthologs #2326. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 T.nigroviridis:17

F6ZAX9              	100.00%		H3C8N8              	100.00%
H2XN25              	51.91%		
F7BEM7              	25.04%		
F6WKT2              	19.58%		
Bootstrap support for F6ZAX9 as seed ortholog is 100%.
Bootstrap support for H3C8N8 as seed ortholog is 62%.
Alternative seed ortholog is H3DEV5 (17 bits away from this cluster)

Group of orthologs #2327. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 T.nigroviridis:336

H2XSL3              	100.00%		H3C3Y1              	100.00%
                    	       		H3DJ15              	31.44%
Bootstrap support for H2XSL3 as seed ortholog is 100%.
Bootstrap support for H3C3Y1 as seed ortholog is 100%.

Group of orthologs #2328. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 T.nigroviridis:336

Q1RL70              	100.00%		H3CRU2              	100.00%
                    	       		H3DBI0              	16.55%
Bootstrap support for Q1RL70 as seed ortholog is 100%.
Bootstrap support for H3CRU2 as seed ortholog is 100%.

Group of orthologs #2329. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 T.nigroviridis:133

F6YSL9              	100.00%		H3C656              	100.00%
Bootstrap support for F6YSL9 as seed ortholog is 100%.
Bootstrap support for H3C656 as seed ortholog is 99%.

Group of orthologs #2330. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:145

F6RYU3              	100.00%		H3D5D9              	100.00%
Bootstrap support for F6RYU3 as seed ortholog is 100%.
Bootstrap support for H3D5D9 as seed ortholog is 100%.

Group of orthologs #2331. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 T.nigroviridis:336

F7AP04              	100.00%		H3DER6              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for H3DER6 as seed ortholog is 100%.

Group of orthologs #2332. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:335

F7ARL3              	100.00%		H3CT74              	100.00%
                    	       		H3CAZ2              	9.11%
Bootstrap support for F7ARL3 as seed ortholog is 100%.
Bootstrap support for H3CT74 as seed ortholog is 100%.

Group of orthologs #2333. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:46

F7ALU8              	100.00%		H3CXW3              	100.00%
                    	       		H3DMK1              	8.03%
Bootstrap support for F7ALU8 as seed ortholog is 100%.
Bootstrap support for H3CXW3 as seed ortholog is 80%.

Group of orthologs #2334. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:335

F6UM67              	100.00%		H3CYJ2              	100.00%
Bootstrap support for F6UM67 as seed ortholog is 100%.
Bootstrap support for H3CYJ2 as seed ortholog is 100%.

Group of orthologs #2335. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 T.nigroviridis:274

F6TJ76              	100.00%		H3D9G3              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for H3D9G3 as seed ortholog is 100%.

Group of orthologs #2336. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:335

H2XXL3              	100.00%		H3C983              	100.00%
Bootstrap support for H2XXL3 as seed ortholog is 100%.
Bootstrap support for H3C983 as seed ortholog is 100%.

Group of orthologs #2337. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:335

F6ZTX2              	100.00%		H3DBM7              	100.00%
Bootstrap support for F6ZTX2 as seed ortholog is 100%.
Bootstrap support for H3DBM7 as seed ortholog is 100%.

Group of orthologs #2338. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 T.nigroviridis:335

H2XJZ5              	100.00%		H3DGP5              	100.00%
Bootstrap support for H2XJZ5 as seed ortholog is 100%.
Bootstrap support for H3DGP5 as seed ortholog is 100%.

Group of orthologs #2339. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:334

Q1RPZ3              	100.00%		H3DNA1              	100.00%
                    	       		H3CWK7              	31.71%
                    	       		H3CC42              	12.64%
Bootstrap support for Q1RPZ3 as seed ortholog is 96%.
Bootstrap support for H3DNA1 as seed ortholog is 100%.

Group of orthologs #2340. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:334

F6UTA8              	100.00%		H3C3P0              	100.00%
                    	       		H3D1S9              	8.21%
Bootstrap support for F6UTA8 as seed ortholog is 100%.
Bootstrap support for H3C3P0 as seed ortholog is 100%.

Group of orthologs #2341. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:166

F6S8T2              	100.00%		H3CXQ8              	100.00%
                    	       		H3BW38              	25.60%
Bootstrap support for F6S8T2 as seed ortholog is 100%.
Bootstrap support for H3CXQ8 as seed ortholog is 99%.

Group of orthologs #2342. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:334

F6YH98              	100.00%		H3CED3              	100.00%
                    	       		H3D683              	33.40%
Bootstrap support for F6YH98 as seed ortholog is 100%.
Bootstrap support for H3CED3 as seed ortholog is 100%.

Group of orthologs #2343. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:334

F6R012              	100.00%		H3DF66              	100.00%
Bootstrap support for F6R012 as seed ortholog is 100%.
Bootstrap support for H3DF66 as seed ortholog is 100%.

Group of orthologs #2344. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:334

F6UGT8              	100.00%		H3DJ34              	100.00%
Bootstrap support for F6UGT8 as seed ortholog is 100%.
Bootstrap support for H3DJ34 as seed ortholog is 100%.

Group of orthologs #2345. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:334

F7BGY7              	100.00%		H3D1T6              	100.00%
Bootstrap support for F7BGY7 as seed ortholog is 100%.
Bootstrap support for H3D1T6 as seed ortholog is 100%.

Group of orthologs #2346. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 T.nigroviridis:334

F6ZIP8              	100.00%		H3DQ44              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for H3DQ44 as seed ortholog is 100%.

Group of orthologs #2347. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:233

H2XZQ0              	100.00%		H3DCQ6              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for H3DCQ6 as seed ortholog is 100%.

Group of orthologs #2348. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 T.nigroviridis:333

F6Z2G5              	100.00%		H3CA13              	100.00%
                    	       		H3CK06              	30.77%
Bootstrap support for F6Z2G5 as seed ortholog is 100%.
Bootstrap support for H3CA13 as seed ortholog is 100%.

Group of orthologs #2349. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:159

F6ZHC8              	100.00%		H3CYC1              	100.00%
                    	       		H3D632              	21.35%
Bootstrap support for F6ZHC8 as seed ortholog is 100%.
Bootstrap support for H3CYC1 as seed ortholog is 99%.

Group of orthologs #2350. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 T.nigroviridis:219

F6X3P0              	100.00%		Q4SF47              	100.00%
                    	       		H3CMC1              	17.89%
Bootstrap support for F6X3P0 as seed ortholog is 100%.
Bootstrap support for Q4SF47 as seed ortholog is 100%.

Group of orthologs #2351. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:132

K9J6P5              	100.00%		H3D5I6              	100.00%
F7AYD9              	58.29%		
Bootstrap support for K9J6P5 as seed ortholog is 99%.
Bootstrap support for H3D5I6 as seed ortholog is 100%.

Group of orthologs #2352. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 T.nigroviridis:333

F6PHM0              	100.00%		H3CDG1              	100.00%
Bootstrap support for F6PHM0 as seed ortholog is 100%.
Bootstrap support for H3CDG1 as seed ortholog is 100%.

Group of orthologs #2353. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:182

F6WMB2              	100.00%		H3CFN3              	100.00%
Bootstrap support for F6WMB2 as seed ortholog is 99%.
Bootstrap support for H3CFN3 as seed ortholog is 99%.

Group of orthologs #2354. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 T.nigroviridis:333

F6SM68              	100.00%		H3CVF4              	100.00%
Bootstrap support for F6SM68 as seed ortholog is 100%.
Bootstrap support for H3CVF4 as seed ortholog is 100%.

Group of orthologs #2355. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:227

F6QEE3              	100.00%		H3DCP2              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 100%.
Bootstrap support for H3DCP2 as seed ortholog is 100%.

Group of orthologs #2356. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:333

F6W304              	100.00%		H3D402              	100.00%
Bootstrap support for F6W304 as seed ortholog is 99%.
Bootstrap support for H3D402 as seed ortholog is 100%.

Group of orthologs #2357. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:93

F6QQZ3              	100.00%		Q4SFM2              	100.00%
Bootstrap support for F6QQZ3 as seed ortholog is 99%.
Bootstrap support for Q4SFM2 as seed ortholog is 99%.

Group of orthologs #2358. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 T.nigroviridis:235

H2XUQ0              	100.00%		H3CL89              	100.00%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for H3CL89 as seed ortholog is 100%.

Group of orthologs #2359. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:333

H2XZI2              	100.00%		H3DC61              	100.00%
Bootstrap support for H2XZI2 as seed ortholog is 99%.
Bootstrap support for H3DC61 as seed ortholog is 100%.

Group of orthologs #2360. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6W7C2              	100.00%		H3CXG2              	100.00%
                    	       		H3D0V7              	13.05%
                    	       		H3CBZ3              	6.69%
Bootstrap support for F6W7C2 as seed ortholog is 100%.
Bootstrap support for H3CXG2 as seed ortholog is 100%.

Group of orthologs #2361. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:100

F6QTW3              	100.00%		H3CNS0              	100.00%
                    	       		H3CXS7              	31.04%
Bootstrap support for F6QTW3 as seed ortholog is 87%.
Bootstrap support for H3CNS0 as seed ortholog is 98%.

Group of orthologs #2362. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6RVB8              	100.00%		H3CLD4              	100.00%
Bootstrap support for F6RVB8 as seed ortholog is 100%.
Bootstrap support for H3CLD4 as seed ortholog is 100%.

Group of orthologs #2363. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6XCJ0              	100.00%		H3CAE5              	100.00%
Bootstrap support for F6XCJ0 as seed ortholog is 100%.
Bootstrap support for H3CAE5 as seed ortholog is 100%.

Group of orthologs #2364. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:212

F6YDS2              	100.00%		H3CGX1              	100.00%
Bootstrap support for F6YDS2 as seed ortholog is 99%.
Bootstrap support for H3CGX1 as seed ortholog is 100%.

Group of orthologs #2365. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6Z5W5              	100.00%		H3CV93              	100.00%
Bootstrap support for F6Z5W5 as seed ortholog is 100%.
Bootstrap support for H3CV93 as seed ortholog is 100%.

Group of orthologs #2366. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6YIJ5              	100.00%		H3CYR1              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for H3CYR1 as seed ortholog is 100%.

Group of orthologs #2367. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6V6L4              	100.00%		H3DDL2              	100.00%
Bootstrap support for F6V6L4 as seed ortholog is 100%.
Bootstrap support for H3DDL2 as seed ortholog is 100%.

Group of orthologs #2368. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 T.nigroviridis:332

F6SDU1              	100.00%		Q4RRE0              	100.00%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for Q4RRE0 as seed ortholog is 100%.

Group of orthologs #2369. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:180

F6Q539              	100.00%		H3CSP3              	100.00%
                    	       		H3DCA5              	18.85%
Bootstrap support for F6Q539 as seed ortholog is 100%.
Bootstrap support for H3CSP3 as seed ortholog is 99%.

Group of orthologs #2370. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:166

F6TGU6              	100.00%		H3D711              	100.00%
                    	       		H3D4K7              	19.88%
Bootstrap support for F6TGU6 as seed ortholog is 99%.
Bootstrap support for H3D711 as seed ortholog is 99%.

Group of orthologs #2371. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:331

F6YGM8              	100.00%		H3DHK8              	100.00%
                    	       		H3CX52              	15.03%
Bootstrap support for F6YGM8 as seed ortholog is 100%.
Bootstrap support for H3DHK8 as seed ortholog is 100%.

Group of orthologs #2372. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:89

F7BJB6              	100.00%		H3DKK6              	100.00%
                    	       		H3CKF1              	52.87%
Bootstrap support for F7BJB6 as seed ortholog is 99%.
Bootstrap support for H3DKK6 as seed ortholog is 92%.

Group of orthologs #2373. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:331

F6PM75              	100.00%		H3CAN7              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for H3CAN7 as seed ortholog is 100%.

Group of orthologs #2374. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:331

F6WW70              	100.00%		H3CPI5              	100.00%
Bootstrap support for F6WW70 as seed ortholog is 100%.
Bootstrap support for H3CPI5 as seed ortholog is 100%.

Group of orthologs #2375. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:331

F6W248              	100.00%		H3D8G8              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for H3D8G8 as seed ortholog is 100%.

Group of orthologs #2376. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:138

F7API1              	100.00%		H3CTD6              	100.00%
Bootstrap support for F7API1 as seed ortholog is 100%.
Bootstrap support for H3CTD6 as seed ortholog is 99%.

Group of orthologs #2377. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:331

F6UKV2              	100.00%		H3DK34              	100.00%
Bootstrap support for F6UKV2 as seed ortholog is 100%.
Bootstrap support for H3DK34 as seed ortholog is 100%.

Group of orthologs #2378. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:211

H2XJH6              	100.00%		H3D3R8              	100.00%
Bootstrap support for H2XJH6 as seed ortholog is 100%.
Bootstrap support for H3D3R8 as seed ortholog is 100%.

Group of orthologs #2379. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 T.nigroviridis:331

F7AH61              	100.00%		Q4RSX0              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for Q4RSX0 as seed ortholog is 100%.

Group of orthologs #2380. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:127

Q5SE06              	100.00%		H3D030              	100.00%
Bootstrap support for Q5SE06 as seed ortholog is 99%.
Bootstrap support for H3D030 as seed ortholog is 99%.

Group of orthologs #2381. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 T.nigroviridis:330

F6XPZ4              	100.00%		H3C315              	100.00%
                    	       		Q4TBU5              	11.23%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for H3C315 as seed ortholog is 100%.

Group of orthologs #2382. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 T.nigroviridis:225

F6U6F4              	100.00%		H3CQV1              	100.00%
                    	       		H3D3Q8              	40.39%
Bootstrap support for F6U6F4 as seed ortholog is 100%.
Bootstrap support for H3CQV1 as seed ortholog is 99%.

Group of orthologs #2383. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 T.nigroviridis:330

F6V5K2              	100.00%		H3CZ09              	100.00%
                    	       		H3DL12              	27.88%
Bootstrap support for F6V5K2 as seed ortholog is 100%.
Bootstrap support for H3CZ09 as seed ortholog is 100%.

Group of orthologs #2384. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 T.nigroviridis:141

F6Z498              	100.00%		H3DBG6              	100.00%
                    	       		H3DF46              	49.67%
Bootstrap support for F6Z498 as seed ortholog is 100%.
Bootstrap support for H3DBG6 as seed ortholog is 99%.

Group of orthologs #2385. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 T.nigroviridis:330

F6SS76              	100.00%		H3CEG2              	100.00%
Bootstrap support for F6SS76 as seed ortholog is 100%.
Bootstrap support for H3CEG2 as seed ortholog is 100%.

Group of orthologs #2386. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 T.nigroviridis:330

F6YUQ8              	100.00%		H3CZC2              	100.00%
Bootstrap support for F6YUQ8 as seed ortholog is 100%.
Bootstrap support for H3CZC2 as seed ortholog is 100%.

Group of orthologs #2387. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:260

F6ZUD7              	100.00%		H3D5Z1              	100.00%
Bootstrap support for F6ZUD7 as seed ortholog is 100%.
Bootstrap support for H3D5Z1 as seed ortholog is 100%.

Group of orthologs #2388. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:330

Q8I7E2              	100.00%		H3CZS3              	100.00%
Bootstrap support for Q8I7E2 as seed ortholog is 100%.
Bootstrap support for H3CZS3 as seed ortholog is 100%.

Group of orthologs #2389. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 T.nigroviridis:329

F6VHL9              	100.00%		H3CD66              	100.00%
                    	       		H3D7V7              	9.55%
Bootstrap support for F6VHL9 as seed ortholog is 100%.
Bootstrap support for H3CD66 as seed ortholog is 100%.

Group of orthologs #2390. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:220

F6ZRB6              	100.00%		H3C3N4              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for H3C3N4 as seed ortholog is 100%.

Group of orthologs #2391. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 T.nigroviridis:329

F6YW46              	100.00%		H3CC60              	100.00%
Bootstrap support for F6YW46 as seed ortholog is 100%.
Bootstrap support for H3CC60 as seed ortholog is 100%.

Group of orthologs #2392. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 T.nigroviridis:67

F7B2X5              	100.00%		H3CLE8              	100.00%
Bootstrap support for F7B2X5 as seed ortholog is 100%.
Bootstrap support for H3CLE8 as seed ortholog is 96%.

Group of orthologs #2393. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:7

F6W0H5              	100.00%		H3CS38              	100.00%
                    	       		H3DNS3              	21.57%
                    	       		H3CEB4              	18.51%
                    	       		H3DP14              	11.45%
                    	       		H3CHG1              	11.35%
                    	       		H3C680              	7.36%
Bootstrap support for F6W0H5 as seed ortholog is 71%.
Alternative seed ortholog is L7N0R2 (33 bits away from this cluster)
Bootstrap support for H3CS38 as seed ortholog is 56%.
Alternative seed ortholog is H3CK00 (7 bits away from this cluster)

Group of orthologs #2394. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:70

F6Y1X1              	100.00%		H3C430              	100.00%
                    	       		H3DDR5              	17.47%
                    	       		H3CQ15              	15.92%
Bootstrap support for F6Y1X1 as seed ortholog is 100%.
Bootstrap support for H3C430 as seed ortholog is 90%.

Group of orthologs #2395. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:42

F6T143              	100.00%		H3DNK7              	100.00%
                    	       		H3CR16              	12.54%
                    	       		H3C3Q1              	5.50%
Bootstrap support for F6T143 as seed ortholog is 99%.
Bootstrap support for H3DNK7 as seed ortholog is 76%.

Group of orthologs #2396. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F6Q558              	100.00%		H3C268              	100.00%
Bootstrap support for F6Q558 as seed ortholog is 100%.
Bootstrap support for H3C268 as seed ortholog is 100%.

Group of orthologs #2397. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F6PLX9              	100.00%		H3CBQ3              	100.00%
Bootstrap support for F6PLX9 as seed ortholog is 100%.
Bootstrap support for H3CBQ3 as seed ortholog is 100%.

Group of orthologs #2398. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F6WCT6              	100.00%		H3CP76              	100.00%
Bootstrap support for F6WCT6 as seed ortholog is 100%.
Bootstrap support for H3CP76 as seed ortholog is 100%.

Group of orthologs #2399. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F6RQS4              	100.00%		H3D5Y7              	100.00%
Bootstrap support for F6RQS4 as seed ortholog is 100%.
Bootstrap support for H3D5Y7 as seed ortholog is 100%.

Group of orthologs #2400. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:21

F6YAG6              	100.00%		H3CLZ6              	100.00%
Bootstrap support for F6YAG6 as seed ortholog is 100%.
Bootstrap support for H3CLZ6 as seed ortholog is 67%.
Alternative seed ortholog is H3CAJ7 (21 bits away from this cluster)

Group of orthologs #2401. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F7A9D9              	100.00%		H3CFU7              	100.00%
Bootstrap support for F7A9D9 as seed ortholog is 100%.
Bootstrap support for H3CFU7 as seed ortholog is 100%.

Group of orthologs #2402. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:68

F6UJB5              	100.00%		H3DGS7              	100.00%
Bootstrap support for F6UJB5 as seed ortholog is 100%.
Bootstrap support for H3DGS7 as seed ortholog is 97%.

Group of orthologs #2403. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F6Y978              	100.00%		H3DF84              	100.00%
Bootstrap support for F6Y978 as seed ortholog is 100%.
Bootstrap support for H3DF84 as seed ortholog is 100%.

Group of orthologs #2404. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F7A328              	100.00%		H3DCX7              	100.00%
Bootstrap support for F7A328 as seed ortholog is 100%.
Bootstrap support for H3DCX7 as seed ortholog is 100%.

Group of orthologs #2405. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

F6YXT8              	100.00%		H3DLC6              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for H3DLC6 as seed ortholog is 100%.

Group of orthologs #2406. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 T.nigroviridis:328

H2XUL1              	100.00%		H3D4Z4              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 100%.
Bootstrap support for H3D4Z4 as seed ortholog is 100%.

Group of orthologs #2407. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 T.nigroviridis:133

F6WPT0              	100.00%		H3CGM6              	100.00%
                    	       		H3CZ16              	37.68%
                    	       		H3C2Y3              	21.85%
Bootstrap support for F6WPT0 as seed ortholog is 100%.
Bootstrap support for H3CGM6 as seed ortholog is 99%.

Group of orthologs #2408. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:219

F6TAL4              	100.00%		H3CXU0              	100.00%
                    	       		H3CK79              	34.09%
                    	       		H3C6X7              	9.04%
Bootstrap support for F6TAL4 as seed ortholog is 100%.
Bootstrap support for H3CXU0 as seed ortholog is 100%.

Group of orthologs #2409. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:327

F6PN41              	100.00%		H3CT97              	100.00%
                    	       		H3DL02              	13.39%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for H3CT97 as seed ortholog is 100%.

Group of orthologs #2410. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:258

F6ZRE8              	100.00%		H3DCG3              	100.00%
                    	       		H3D0I3              	33.61%
Bootstrap support for F6ZRE8 as seed ortholog is 100%.
Bootstrap support for H3DCG3 as seed ortholog is 100%.

Group of orthologs #2411. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:53

Q4H2M5              	100.00%		H3CSU0              	100.00%
                    	       		H3CKM8              	74.72%
Bootstrap support for Q4H2M5 as seed ortholog is 99%.
Bootstrap support for H3CSU0 as seed ortholog is 90%.

Group of orthologs #2412. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:280

F6QGV6              	100.00%		H3CAZ9              	100.00%
Bootstrap support for F6QGV6 as seed ortholog is 100%.
Bootstrap support for H3CAZ9 as seed ortholog is 100%.

Group of orthologs #2413. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:247

F6SW03              	100.00%		H3CAQ1              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for H3CAQ1 as seed ortholog is 100%.

Group of orthologs #2414. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:327

F6R906              	100.00%		H3CGE2              	100.00%
Bootstrap support for F6R906 as seed ortholog is 100%.
Bootstrap support for H3CGE2 as seed ortholog is 100%.

Group of orthologs #2415. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:219

F6X4A8              	100.00%		H3D4D6              	100.00%
Bootstrap support for F6X4A8 as seed ortholog is 99%.
Bootstrap support for H3D4D6 as seed ortholog is 100%.

Group of orthologs #2416. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:253

H2XX04              	100.00%		H3C7Y1              	100.00%
Bootstrap support for H2XX04 as seed ortholog is 100%.
Bootstrap support for H3C7Y1 as seed ortholog is 100%.

Group of orthologs #2417. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:327

I6L7H7              	100.00%		H3BX02              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for H3BX02 as seed ortholog is 100%.

Group of orthologs #2418. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:327

H2Y397              	100.00%		H3CE17              	100.00%
Bootstrap support for H2Y397 as seed ortholog is 100%.
Bootstrap support for H3CE17 as seed ortholog is 100%.

Group of orthologs #2419. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 T.nigroviridis:327

F6ZRN6              	100.00%		H3DMF6              	100.00%
Bootstrap support for F6ZRN6 as seed ortholog is 100%.
Bootstrap support for H3DMF6 as seed ortholog is 100%.

Group of orthologs #2420. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:135

F6QZ03              	100.00%		H3CCW9              	100.00%
                    	       		H3D606              	7.97%
Bootstrap support for F6QZ03 as seed ortholog is 100%.
Bootstrap support for H3CCW9 as seed ortholog is 100%.

Group of orthologs #2421. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:43

F6Q0N1              	100.00%		H3CY90              	100.00%
Bootstrap support for F6Q0N1 as seed ortholog is 100%.
Bootstrap support for H3CY90 as seed ortholog is 93%.

Group of orthologs #2422. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:326

F6PM63              	100.00%		H3D3V2              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for H3D3V2 as seed ortholog is 100%.

Group of orthologs #2423. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:326

F6WCC6              	100.00%		H3CNR2              	100.00%
Bootstrap support for F6WCC6 as seed ortholog is 100%.
Bootstrap support for H3CNR2 as seed ortholog is 100%.

Group of orthologs #2424. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:326

F6TJ64              	100.00%		Q4SGE5              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for Q4SGE5 as seed ortholog is 100%.

Group of orthologs #2425. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:326

F6YLQ9              	100.00%		Q4RJ32              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for Q4RJ32 as seed ortholog is 100%.

Group of orthologs #2426. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 T.nigroviridis:326

H2XSX6              	100.00%		H3D4C1              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for H3D4C1 as seed ortholog is 100%.

Group of orthologs #2427. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:325

F7AEE6              	100.00%		H3DHU8              	100.00%
                    	       		H3CA95              	33.18%
Bootstrap support for F7AEE6 as seed ortholog is 100%.
Bootstrap support for H3DHU8 as seed ortholog is 100%.

Group of orthologs #2428. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:325

H2XXL5              	100.00%		H3DGZ8              	100.00%
                    	       		H3CLV0              	71.96%
Bootstrap support for H2XXL5 as seed ortholog is 100%.
Bootstrap support for H3DGZ8 as seed ortholog is 100%.

Group of orthologs #2429. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:211

F6PLY6              	100.00%		H3CD88              	100.00%
Bootstrap support for F6PLY6 as seed ortholog is 100%.
Bootstrap support for H3CD88 as seed ortholog is 100%.

Group of orthologs #2430. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:207

F6XWH9              	100.00%		H3CKQ0              	100.00%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for H3CKQ0 as seed ortholog is 100%.

Group of orthologs #2431. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:103

F6Z6J2              	100.00%		H3CPR2              	100.00%
Bootstrap support for F6Z6J2 as seed ortholog is 100%.
Bootstrap support for H3CPR2 as seed ortholog is 99%.

Group of orthologs #2432. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:325

F7AFK8              	100.00%		H3CSE3              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 100%.
Bootstrap support for H3CSE3 as seed ortholog is 100%.

Group of orthologs #2433. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:325

F7BK20              	100.00%		H3CY03              	100.00%
Bootstrap support for F7BK20 as seed ortholog is 100%.
Bootstrap support for H3CY03 as seed ortholog is 100%.

Group of orthologs #2434. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:325

F7ASX2              	100.00%		H3DGB9              	100.00%
Bootstrap support for F7ASX2 as seed ortholog is 100%.
Bootstrap support for H3DGB9 as seed ortholog is 100%.

Group of orthologs #2435. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 T.nigroviridis:325

H2XTC5              	100.00%		H3DEU0              	100.00%
Bootstrap support for H2XTC5 as seed ortholog is 100%.
Bootstrap support for H3DEU0 as seed ortholog is 100%.

Group of orthologs #2436. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 T.nigroviridis:324

H2XJY3              	100.00%		H3CB26              	100.00%
                    	       		H3DI71              	28.35%
                    	       		H3CB95              	16.14%
Bootstrap support for H2XJY3 as seed ortholog is 100%.
Bootstrap support for H3CB26 as seed ortholog is 100%.

Group of orthologs #2437. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 T.nigroviridis:324

F6PMM3              	100.00%		H3D5Z3              	100.00%
                    	       		H3D0E4              	14.08%
Bootstrap support for F6PMM3 as seed ortholog is 100%.
Bootstrap support for H3D5Z3 as seed ortholog is 100%.

Group of orthologs #2438. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 T.nigroviridis:324

F6RCC2              	100.00%		H3D8T3              	100.00%
I6L237              	95.87%		
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for H3D8T3 as seed ortholog is 100%.

Group of orthologs #2439. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 T.nigroviridis:324

F6XYV2              	100.00%		H3D1I5              	100.00%
                    	       		H3DD37              	53.97%
Bootstrap support for F6XYV2 as seed ortholog is 100%.
Bootstrap support for H3D1I5 as seed ortholog is 100%.

Group of orthologs #2440. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 T.nigroviridis:324

H2XW51              	100.00%		H3CT65              	100.00%
                    	       		H3CF45              	25.66%
Bootstrap support for H2XW51 as seed ortholog is 100%.
Bootstrap support for H3CT65 as seed ortholog is 100%.

Group of orthologs #2441. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:278

F6Z1B8              	100.00%		H3CCB6              	100.00%
Bootstrap support for F6Z1B8 as seed ortholog is 100%.
Bootstrap support for H3CCB6 as seed ortholog is 100%.

Group of orthologs #2442. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:243

H2XPM6              	100.00%		H3CSQ4              	100.00%
Bootstrap support for H2XPM6 as seed ortholog is 100%.
Bootstrap support for H3CSQ4 as seed ortholog is 100%.

Group of orthologs #2443. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 T.nigroviridis:323

F6W9C9              	100.00%		H3DF55              	100.00%
                    	       		H3DLP4              	16.86%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for H3DF55 as seed ortholog is 100%.

Group of orthologs #2444. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:70

F6U088              	100.00%		H3CA38              	100.00%
Bootstrap support for F6U088 as seed ortholog is 100%.
Bootstrap support for H3CA38 as seed ortholog is 98%.

Group of orthologs #2445. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 T.nigroviridis:323

F6RZ45              	100.00%		H3CLH8              	100.00%
Bootstrap support for F6RZ45 as seed ortholog is 100%.
Bootstrap support for H3CLH8 as seed ortholog is 100%.

Group of orthologs #2446. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 T.nigroviridis:323

F6UJD6              	100.00%		H3CPZ2              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for H3CPZ2 as seed ortholog is 100%.

Group of orthologs #2447. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 T.nigroviridis:196

H2XLP9              	100.00%		H3BW89              	100.00%
Bootstrap support for H2XLP9 as seed ortholog is 100%.
Bootstrap support for H3BW89 as seed ortholog is 99%.

Group of orthologs #2448. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:266

F6VIB4              	100.00%		H3CRT9              	100.00%
                    	       		H3CNL9              	21.35%
Bootstrap support for F6VIB4 as seed ortholog is 100%.
Bootstrap support for H3CRT9 as seed ortholog is 100%.

Group of orthologs #2449. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:230

H2XS14              	100.00%		H3D487              	100.00%
                    	       		H3CJG9              	71.21%
Bootstrap support for H2XS14 as seed ortholog is 100%.
Bootstrap support for H3D487 as seed ortholog is 100%.

Group of orthologs #2450. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:95

F6ZHF5              	100.00%		H3DP02              	100.00%
                    	       		Q4RJT5              	61.05%
Bootstrap support for F6ZHF5 as seed ortholog is 99%.
Bootstrap support for H3DP02 as seed ortholog is 99%.

Group of orthologs #2451. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:38

F6V597              	100.00%		H3C559              	100.00%
Bootstrap support for F6V597 as seed ortholog is 99%.
Bootstrap support for H3C559 as seed ortholog is 82%.

Group of orthologs #2452. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:322

H2XN21              	100.00%		H3C9U4              	100.00%
Bootstrap support for H2XN21 as seed ortholog is 100%.
Bootstrap support for H3C9U4 as seed ortholog is 100%.

Group of orthologs #2453. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:82

F7A5W3              	100.00%		H3CMD7              	100.00%
Bootstrap support for F7A5W3 as seed ortholog is 100%.
Bootstrap support for H3CMD7 as seed ortholog is 99%.

Group of orthologs #2454. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:81

F7B5N7              	100.00%		H3CZF4              	100.00%
Bootstrap support for F7B5N7 as seed ortholog is 100%.
Bootstrap support for H3CZF4 as seed ortholog is 98%.

Group of orthologs #2455. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:191

F6ZFI0              	100.00%		H3DG30              	100.00%
Bootstrap support for F6ZFI0 as seed ortholog is 100%.
Bootstrap support for H3DG30 as seed ortholog is 100%.

Group of orthologs #2456. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:322

F6YI25              	100.00%		Q4T6P5              	100.00%
Bootstrap support for F6YI25 as seed ortholog is 100%.
Bootstrap support for Q4T6P5 as seed ortholog is 100%.

Group of orthologs #2457. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 T.nigroviridis:322

F7A2R6              	100.00%		Q4SLE5              	100.00%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for Q4SLE5 as seed ortholog is 100%.

Group of orthologs #2458. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:27

F6S1S7              	100.00%		H3D274              	100.00%
                    	       		H3CUX2              	71.82%
                    	       		H3CDS4              	32.73%
                    	       		H3D2C4              	22.73%
Bootstrap support for F6S1S7 as seed ortholog is 100%.
Bootstrap support for H3D274 as seed ortholog is 92%.

Group of orthologs #2459. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:321

F6XRP8              	100.00%		H3D2E5              	100.00%
                    	       		H3CMR4              	56.60%
Bootstrap support for F6XRP8 as seed ortholog is 100%.
Bootstrap support for H3D2E5 as seed ortholog is 100%.

Group of orthologs #2460. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:81

H2XUU8              	100.00%		H3CHL0              	100.00%
                    	       		H3CAL8              	5.85%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for H3CHL0 as seed ortholog is 96%.

Group of orthologs #2461. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:114

F6YVH4              	100.00%		H3DJA0              	100.00%
                    	       		H3D303              	5.40%
Bootstrap support for F6YVH4 as seed ortholog is 98%.
Bootstrap support for H3DJA0 as seed ortholog is 99%.

Group of orthologs #2462. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 T.nigroviridis:2

H2XQH0              	100.00%		H3DME1              	100.00%
F6ZRC6              	17.37%		
Bootstrap support for H2XQH0 as seed ortholog is 98%.
Bootstrap support for H3DME1 as seed ortholog is 48%.
Alternative seed ortholog is H3DD71 (2 bits away from this cluster)

Group of orthologs #2463. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:264

C4B8W9              	100.00%		H3C7S4              	100.00%
Bootstrap support for C4B8W9 as seed ortholog is 100%.
Bootstrap support for H3C7S4 as seed ortholog is 100%.

Group of orthologs #2464. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:321

F6VD90              	100.00%		H3CSI5              	100.00%
Bootstrap support for F6VD90 as seed ortholog is 100%.
Bootstrap support for H3CSI5 as seed ortholog is 100%.

Group of orthologs #2465. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:321

F6QHP8              	100.00%		H3DLT6              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for H3DLT6 as seed ortholog is 100%.

Group of orthologs #2466. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:321

F6XNG1              	100.00%		H3D7Y2              	100.00%
Bootstrap support for F6XNG1 as seed ortholog is 100%.
Bootstrap support for H3D7Y2 as seed ortholog is 100%.

Group of orthologs #2467. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:270

F6ZVR2              	100.00%		H3D801              	100.00%
Bootstrap support for F6ZVR2 as seed ortholog is 100%.
Bootstrap support for H3D801 as seed ortholog is 100%.

Group of orthologs #2468. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 T.nigroviridis:321

H2XUK5              	100.00%		H3CTM0              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 100%.
Bootstrap support for H3CTM0 as seed ortholog is 100%.

Group of orthologs #2469. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:321

F6YGZ1              	100.00%		Q4SVI5              	100.00%
Bootstrap support for F6YGZ1 as seed ortholog is 100%.
Bootstrap support for Q4SVI5 as seed ortholog is 100%.

Group of orthologs #2470. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:273

F7BBJ6              	100.00%		H3DMA5              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for H3DMA5 as seed ortholog is 100%.

Group of orthologs #2471. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 T.nigroviridis:121

F6S3S9              	100.00%		H3D7H9              	100.00%
                    	       		H3DD56              	54.62%
                    	       		H3CYG9              	9.52%
Bootstrap support for F6S3S9 as seed ortholog is 100%.
Bootstrap support for H3D7H9 as seed ortholog is 99%.

Group of orthologs #2472. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:54

H2XRT9              	100.00%		H3DGA5              	100.00%
                    	       		H3C9S5              	69.75%
                    	       		H3DAG7              	23.04%
Bootstrap support for H2XRT9 as seed ortholog is 99%.
Bootstrap support for H3DGA5 as seed ortholog is 82%.

Group of orthologs #2473. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 T.nigroviridis:274

H2XRX5              	100.00%		H3CX44              	100.00%
                    	       		H3CNS9              	12.61%
Bootstrap support for H2XRX5 as seed ortholog is 100%.
Bootstrap support for H3CX44 as seed ortholog is 100%.

Group of orthologs #2474. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:196

F6V5G2              	100.00%		H3BZJ9              	100.00%
Bootstrap support for F6V5G2 as seed ortholog is 99%.
Bootstrap support for H3BZJ9 as seed ortholog is 100%.

Group of orthologs #2475. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:202

F6PIE8              	100.00%		Q4SMQ7              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 100%.
Bootstrap support for Q4SMQ7 as seed ortholog is 100%.

Group of orthologs #2476. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 T.nigroviridis:320

F6YJ10              	100.00%		H3D5N2              	100.00%
Bootstrap support for F6YJ10 as seed ortholog is 100%.
Bootstrap support for H3D5N2 as seed ortholog is 100%.

Group of orthologs #2477. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 T.nigroviridis:320

H2Y0B7              	100.00%		H3DLD6              	100.00%
Bootstrap support for H2Y0B7 as seed ortholog is 100%.
Bootstrap support for H3DLD6 as seed ortholog is 100%.

Group of orthologs #2478. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:30

F6UNA3              	100.00%		H3DHK3              	100.00%
F6QH95              	17.46%		
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for H3DHK3 as seed ortholog is 77%.

Group of orthologs #2479. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:319

H2XLX0              	100.00%		H3D070              	100.00%
                    	       		H3CMF1              	41.94%
Bootstrap support for H2XLX0 as seed ortholog is 100%.
Bootstrap support for H3D070 as seed ortholog is 100%.

Group of orthologs #2480. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:319

F6Q7D4              	100.00%		H3C2G6              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for H3C2G6 as seed ortholog is 100%.

Group of orthologs #2481. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:142

F6XYB7              	100.00%		H3D627              	100.00%
Bootstrap support for F6XYB7 as seed ortholog is 100%.
Bootstrap support for H3D627 as seed ortholog is 99%.

Group of orthologs #2482. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:319

F6ZK14              	100.00%		H3DA97              	100.00%
Bootstrap support for F6ZK14 as seed ortholog is 100%.
Bootstrap support for H3DA97 as seed ortholog is 100%.

Group of orthologs #2483. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:96

H2XV16              	100.00%		H3CTS9              	100.00%
Bootstrap support for H2XV16 as seed ortholog is 100%.
Bootstrap support for H3CTS9 as seed ortholog is 98%.

Group of orthologs #2484. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:45

H2XYD3              	100.00%		H3CPX2              	100.00%
Bootstrap support for H2XYD3 as seed ortholog is 100%.
Bootstrap support for H3CPX2 as seed ortholog is 88%.

Group of orthologs #2485. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:32

F6Z255              	100.00%		H3DP78              	100.00%
Bootstrap support for F6Z255 as seed ortholog is 100%.
Bootstrap support for H3DP78 as seed ortholog is 89%.

Group of orthologs #2486. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:237

H2XNI7              	100.00%		H3DMM1              	100.00%
Bootstrap support for H2XNI7 as seed ortholog is 100%.
Bootstrap support for H3DMM1 as seed ortholog is 100%.

Group of orthologs #2487. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:62

Q4VYB1              	100.00%		H3D8J2              	100.00%
Bootstrap support for Q4VYB1 as seed ortholog is 99%.
Bootstrap support for H3D8J2 as seed ortholog is 97%.

Group of orthologs #2488. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 T.nigroviridis:319

H2XS91              	100.00%		Q4SA94              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for Q4SA94 as seed ortholog is 100%.

Group of orthologs #2489. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 T.nigroviridis:318

F6XE85              	100.00%		H3C4S2              	100.00%
Bootstrap support for F6XE85 as seed ortholog is 100%.
Bootstrap support for H3C4S2 as seed ortholog is 100%.

Group of orthologs #2490. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:56

F6PQ74              	100.00%		H3D9F1              	100.00%
Bootstrap support for F6PQ74 as seed ortholog is 100%.
Bootstrap support for H3D9F1 as seed ortholog is 96%.

Group of orthologs #2491. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:230

F6UQ99              	100.00%		H3CTF0              	100.00%
                    	       		H3CZQ2              	25.71%
Bootstrap support for F6UQ99 as seed ortholog is 100%.
Bootstrap support for H3CTF0 as seed ortholog is 100%.

Group of orthologs #2492. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

F6PJ79              	100.00%		H3DGP2              	100.00%
                    	       		H3D937              	24.39%
Bootstrap support for F6PJ79 as seed ortholog is 100%.
Bootstrap support for H3DGP2 as seed ortholog is 100%.

Group of orthologs #2493. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:47

F6PM82              	100.00%		Q4S2W1              	100.00%
                    	       		H3D441              	28.95%
Bootstrap support for F6PM82 as seed ortholog is 99%.
Bootstrap support for Q4S2W1 as seed ortholog is 98%.

Group of orthologs #2494. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

F6QDX7              	100.00%		H3CE10              	100.00%
Bootstrap support for F6QDX7 as seed ortholog is 100%.
Bootstrap support for H3CE10 as seed ortholog is 100%.

Group of orthologs #2495. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

F6R7I5              	100.00%		H3CJT9              	100.00%
Bootstrap support for F6R7I5 as seed ortholog is 100%.
Bootstrap support for H3CJT9 as seed ortholog is 100%.

Group of orthologs #2496. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

F6SQC0              	100.00%		H3DPG1              	100.00%
Bootstrap support for F6SQC0 as seed ortholog is 100%.
Bootstrap support for H3DPG1 as seed ortholog is 100%.

Group of orthologs #2497. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:22

H2XVD5              	100.00%		H3CDI1              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for H3CDI1 as seed ortholog is 77%.

Group of orthologs #2498. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:240

F7AGV3              	100.00%		H3D0U8              	100.00%
Bootstrap support for F7AGV3 as seed ortholog is 99%.
Bootstrap support for H3D0U8 as seed ortholog is 99%.

Group of orthologs #2499. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

F6V771              	100.00%		H3DIT0              	100.00%
Bootstrap support for F6V771 as seed ortholog is 100%.
Bootstrap support for H3DIT0 as seed ortholog is 100%.

Group of orthologs #2500. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

F6Y886              	100.00%		H3DKK8              	100.00%
Bootstrap support for F6Y886 as seed ortholog is 100%.
Bootstrap support for H3DKK8 as seed ortholog is 100%.

Group of orthologs #2501. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 T.nigroviridis:317

H2XPH6              	100.00%		H3DF42              	100.00%
Bootstrap support for H2XPH6 as seed ortholog is 100%.
Bootstrap support for H3DF42 as seed ortholog is 100%.

Group of orthologs #2502. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 T.nigroviridis:316

F6TS32              	100.00%		H3DBC2              	100.00%
                    	       		H3DBR4              	8.02%
Bootstrap support for F6TS32 as seed ortholog is 100%.
Bootstrap support for H3DBC2 as seed ortholog is 100%.

Group of orthologs #2503. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:188

F6W9T5              	100.00%		H3D7M9              	100.00%
                    	       		H3D9W5              	21.37%
Bootstrap support for F6W9T5 as seed ortholog is 100%.
Bootstrap support for H3D7M9 as seed ortholog is 100%.

Group of orthologs #2504. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 T.nigroviridis:316

F6PLX2              	100.00%		H3CR49              	100.00%
Bootstrap support for F6PLX2 as seed ortholog is 100%.
Bootstrap support for H3CR49 as seed ortholog is 100%.

Group of orthologs #2505. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 T.nigroviridis:316

F6RTY1              	100.00%		H3CUL8              	100.00%
Bootstrap support for F6RTY1 as seed ortholog is 100%.
Bootstrap support for H3CUL8 as seed ortholog is 100%.

Group of orthologs #2506. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 T.nigroviridis:254

H2XNY0              	100.00%		H3CNP9              	100.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for H3CNP9 as seed ortholog is 100%.

Group of orthologs #2507. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:185

H2XWZ5              	100.00%		H3CNC5              	100.00%
Bootstrap support for H2XWZ5 as seed ortholog is 100%.
Bootstrap support for H3CNC5 as seed ortholog is 100%.

Group of orthologs #2508. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 T.nigroviridis:252

Q4H2Q6              	100.00%		H3DBA3              	100.00%
Bootstrap support for Q4H2Q6 as seed ortholog is 100%.
Bootstrap support for H3DBA3 as seed ortholog is 100%.

Group of orthologs #2509. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 T.nigroviridis:316

H2XYT3              	100.00%		H3DLL0              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for H3DLL0 as seed ortholog is 100%.

Group of orthologs #2510. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 T.nigroviridis:315

F6YSM6              	100.00%		H3BYL5              	100.00%
Bootstrap support for F6YSM6 as seed ortholog is 100%.
Bootstrap support for H3BYL5 as seed ortholog is 100%.

Group of orthologs #2511. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 T.nigroviridis:315

F6R8Z1              	100.00%		H3CZR1              	100.00%
Bootstrap support for F6R8Z1 as seed ortholog is 100%.
Bootstrap support for H3CZR1 as seed ortholog is 100%.

Group of orthologs #2512. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 T.nigroviridis:192

F6VVB7              	100.00%		H3CL15              	100.00%
Bootstrap support for F6VVB7 as seed ortholog is 100%.
Bootstrap support for H3CL15 as seed ortholog is 100%.

Group of orthologs #2513. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 T.nigroviridis:315

F7AEF1              	100.00%		H3C8M0              	100.00%
Bootstrap support for F7AEF1 as seed ortholog is 100%.
Bootstrap support for H3C8M0 as seed ortholog is 100%.

Group of orthologs #2514. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:73

F7AHV7              	100.00%		H3CNS1              	100.00%
Bootstrap support for F7AHV7 as seed ortholog is 100%.
Bootstrap support for H3CNS1 as seed ortholog is 99%.

Group of orthologs #2515. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:102

Q1RPY5              	100.00%		H3CW38              	100.00%
Bootstrap support for Q1RPY5 as seed ortholog is 99%.
Bootstrap support for H3CW38 as seed ortholog is 99%.

Group of orthologs #2516. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:239

H2XSQ5              	100.00%		H3DM88              	100.00%
Bootstrap support for H2XSQ5 as seed ortholog is 99%.
Bootstrap support for H3DM88 as seed ortholog is 100%.

Group of orthologs #2517. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:257

Q4H3S8              	100.00%		H3DJP7              	100.00%
Bootstrap support for Q4H3S8 as seed ortholog is 100%.
Bootstrap support for H3DJP7 as seed ortholog is 100%.

Group of orthologs #2518. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:314

F6R939              	100.00%		H3CTW6              	100.00%
                    	       		H3CM39              	93.55%
Bootstrap support for F6R939 as seed ortholog is 100%.
Bootstrap support for H3CTW6 as seed ortholog is 100%.

Group of orthologs #2519. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:101

F6W1X7              	100.00%		H3CWM1              	100.00%
                    	       		H3D969              	56.91%
Bootstrap support for F6W1X7 as seed ortholog is 99%.
Bootstrap support for H3CWM1 as seed ortholog is 99%.

Group of orthologs #2520. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:314

F6PHR7              	100.00%		H3C4Q2              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for H3C4Q2 as seed ortholog is 100%.

Group of orthologs #2521. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:247

F6PWM6              	100.00%		H3CS80              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 100%.
Bootstrap support for H3CS80 as seed ortholog is 100%.

Group of orthologs #2522. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:157

F7AHE1              	100.00%		H3C2P0              	100.00%
Bootstrap support for F7AHE1 as seed ortholog is 100%.
Bootstrap support for H3C2P0 as seed ortholog is 100%.

Group of orthologs #2523. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:314

F6PH58              	100.00%		H3DRG9              	100.00%
Bootstrap support for F6PH58 as seed ortholog is 100%.
Bootstrap support for H3DRG9 as seed ortholog is 100%.

Group of orthologs #2524. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:314

F6WSZ7              	100.00%		H3D7P8              	100.00%
Bootstrap support for F6WSZ7 as seed ortholog is 100%.
Bootstrap support for H3D7P8 as seed ortholog is 100%.

Group of orthologs #2525. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:119

F6X5R6              	100.00%		H3D8E9              	100.00%
Bootstrap support for F6X5R6 as seed ortholog is 99%.
Bootstrap support for H3D8E9 as seed ortholog is 99%.

Group of orthologs #2526. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:314

H2XVA2              	100.00%		H3CQW8              	100.00%
Bootstrap support for H2XVA2 as seed ortholog is 100%.
Bootstrap support for H3CQW8 as seed ortholog is 100%.

Group of orthologs #2527. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 T.nigroviridis:82

F6X5I5              	100.00%		H3DNQ2              	100.00%
Bootstrap support for F6X5I5 as seed ortholog is 100%.
Bootstrap support for H3DNQ2 as seed ortholog is 99%.

Group of orthologs #2528. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 T.nigroviridis:313

Q68A32              	100.00%		Q4SMU5              	100.00%
                    	       		H3D4Y4              	46.76%
                    	       		Q4S6T9              	20.14%
Bootstrap support for Q68A32 as seed ortholog is 100%.
Bootstrap support for Q4SMU5 as seed ortholog is 100%.

Group of orthologs #2529. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 T.nigroviridis:80

F6VFD2              	100.00%		H3BW32              	100.00%
                    	       		H3CEH8              	12.41%
Bootstrap support for F6VFD2 as seed ortholog is 100%.
Bootstrap support for H3BW32 as seed ortholog is 100%.

Group of orthologs #2530. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 T.nigroviridis:313

F6WWY7              	100.00%		H3C1G9              	100.00%
                    	       		H3CTW2              	7.26%
Bootstrap support for F6WWY7 as seed ortholog is 100%.
Bootstrap support for H3C1G9 as seed ortholog is 100%.

Group of orthologs #2531. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:148

F6ZFM9              	100.00%		H3DI79              	100.00%
                    	       		H3BXK1              	21.63%
Bootstrap support for F6ZFM9 as seed ortholog is 100%.
Bootstrap support for H3DI79 as seed ortholog is 99%.

Group of orthologs #2532. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 T.nigroviridis:313

F6TN28              	100.00%		H3CYK3              	100.00%
Bootstrap support for F6TN28 as seed ortholog is 100%.
Bootstrap support for H3CYK3 as seed ortholog is 100%.

Group of orthologs #2533. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 T.nigroviridis:246

H2Y1I3              	100.00%		H3CFH1              	100.00%
Bootstrap support for H2Y1I3 as seed ortholog is 100%.
Bootstrap support for H3CFH1 as seed ortholog is 100%.

Group of orthologs #2534. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 T.nigroviridis:178

F6YU98              	100.00%		H3DGN1              	100.00%
Bootstrap support for F6YU98 as seed ortholog is 100%.
Bootstrap support for H3DGN1 as seed ortholog is 100%.

Group of orthologs #2535. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 T.nigroviridis:313

H2XM20              	100.00%		H3D783              	100.00%
Bootstrap support for H2XM20 as seed ortholog is 100%.
Bootstrap support for H3D783 as seed ortholog is 100%.

Group of orthologs #2536. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 T.nigroviridis:312

F6S925              	100.00%		H3DPH7              	100.00%
F6S909              	13.46%		H3DJJ3              	18.16%
Q4H398              	6.25%		H3D0H7              	9.63%
Bootstrap support for F6S925 as seed ortholog is 100%.
Bootstrap support for H3DPH7 as seed ortholog is 100%.

Group of orthologs #2537. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:30

F6X7Y3              	100.00%		H3D9L1              	100.00%
                    	       		H3CLJ1              	20.53%
                    	       		H3BW22              	6.71%
                    	       		H3C381              	6.10%
                    	       		H3CJM4              	6.10%
Bootstrap support for F6X7Y3 as seed ortholog is 71%.
Alternative seed ortholog is H2XTR1 (18 bits away from this cluster)
Bootstrap support for H3D9L1 as seed ortholog is 67%.
Alternative seed ortholog is H3CXE1 (30 bits away from this cluster)

Group of orthologs #2538. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 T.nigroviridis:23

H2Y040              	100.00%		H3C873              	100.00%
                    	       		H3DAT1              	64.15%
                    	       		Q4S991              	56.60%
Bootstrap support for H2Y040 as seed ortholog is 78%.
Bootstrap support for H3C873 as seed ortholog is 88%.

Group of orthologs #2539. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 T.nigroviridis:251

F6VHJ0              	100.00%		H3C866              	100.00%
Bootstrap support for F6VHJ0 as seed ortholog is 100%.
Bootstrap support for H3C866 as seed ortholog is 100%.

Group of orthologs #2540. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 T.nigroviridis:312

F6QBE1              	100.00%		H3CQS7              	100.00%
Bootstrap support for F6QBE1 as seed ortholog is 100%.
Bootstrap support for H3CQS7 as seed ortholog is 100%.

Group of orthologs #2541. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 T.nigroviridis:167

F6Y9R7              	100.00%		H3CBI7              	100.00%
Bootstrap support for F6Y9R7 as seed ortholog is 100%.
Bootstrap support for H3CBI7 as seed ortholog is 99%.

Group of orthologs #2542. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 T.nigroviridis:312

F6VH72              	100.00%		H3CPH7              	100.00%
Bootstrap support for F6VH72 as seed ortholog is 100%.
Bootstrap support for H3CPH7 as seed ortholog is 100%.

Group of orthologs #2543. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:312

F6RCH7              	100.00%		H3D5J4              	100.00%
Bootstrap support for F6RCH7 as seed ortholog is 100%.
Bootstrap support for H3D5J4 as seed ortholog is 100%.

Group of orthologs #2544. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 T.nigroviridis:312

F6S1K1              	100.00%		H3D9I9              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for H3D9I9 as seed ortholog is 100%.

Group of orthologs #2545. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:133

F7AN60              	100.00%		H3D130              	100.00%
Bootstrap support for F7AN60 as seed ortholog is 99%.
Bootstrap support for H3D130 as seed ortholog is 99%.

Group of orthologs #2546. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:151

F6TIL4              	100.00%		H3D4Z7              	100.00%
                    	       		H3DGM5              	41.41%
                    	       		H3CNQ9              	36.08%
                    	       		H3DRA0              	20.45%
Bootstrap support for F6TIL4 as seed ortholog is 100%.
Bootstrap support for H3D4Z7 as seed ortholog is 99%.

Group of orthologs #2547. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:311

F7A1F6              	100.00%		H3DPC5              	100.00%
F7A1G9              	31.80%		H3CE92              	18.87%
                    	       		H3CLP7              	6.09%
Bootstrap support for F7A1F6 as seed ortholog is 100%.
Bootstrap support for H3DPC5 as seed ortholog is 100%.

Group of orthologs #2548. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:112

F6WF86              	100.00%		H3CLW2              	100.00%
                    	       		H3DPZ2              	17.63%
Bootstrap support for F6WF86 as seed ortholog is 99%.
Bootstrap support for H3CLW2 as seed ortholog is 98%.

Group of orthologs #2549. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:180

H2XKH3              	100.00%		H3CGN8              	100.00%
                    	       		H3CI02              	8.70%
Bootstrap support for H2XKH3 as seed ortholog is 100%.
Bootstrap support for H3CGN8 as seed ortholog is 100%.

Group of orthologs #2550. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:217

Q1RLG5              	100.00%		H3CZH2              	100.00%
                    	       		Q4RM50              	68.68%
Bootstrap support for Q1RLG5 as seed ortholog is 100%.
Bootstrap support for H3CZH2 as seed ortholog is 100%.

Group of orthologs #2551. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:136

H2XTG6              	100.00%		H3DI03              	100.00%
F6YH77              	6.15%		
Bootstrap support for H2XTG6 as seed ortholog is 92%.
Bootstrap support for H3DI03 as seed ortholog is 99%.

Group of orthologs #2552. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 T.nigroviridis:58

Q68A28              	100.00%		Q4S7T1              	100.00%
                    	       		Q4ZJF5              	22.11%
Bootstrap support for Q68A28 as seed ortholog is 92%.
Bootstrap support for Q4S7T1 as seed ortholog is 99%.

Group of orthologs #2553. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:10

F6WPS3              	100.00%		H3CY64              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for H3CY64 as seed ortholog is 65%.
Alternative seed ortholog is H3DHE0 (10 bits away from this cluster)

Group of orthologs #2554. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:64

F7A8L8              	100.00%		H3CYI1              	100.00%
Bootstrap support for F7A8L8 as seed ortholog is 100%.
Bootstrap support for H3CYI1 as seed ortholog is 48%.
Alternative seed ortholog is H3C605 (64 bits away from this cluster)

Group of orthologs #2555. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:199

F6YI64              	100.00%		H3D8A5              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for H3D8A5 as seed ortholog is 100%.

Group of orthologs #2556. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:311

F6V6S8              	100.00%		Q4S6V6              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for Q4S6V6 as seed ortholog is 100%.

Group of orthologs #2557. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:99

F6XTV8              	100.00%		H3DMR5              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for H3DMR5 as seed ortholog is 99%.

Group of orthologs #2558. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 T.nigroviridis:311

F6Y9F6              	100.00%		Q4RF48              	100.00%
Bootstrap support for F6Y9F6 as seed ortholog is 100%.
Bootstrap support for Q4RF48 as seed ortholog is 100%.

Group of orthologs #2559. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:203

H2Y0K9              	100.00%		H3D0Z1              	100.00%
Bootstrap support for H2Y0K9 as seed ortholog is 100%.
Bootstrap support for H3D0Z1 as seed ortholog is 100%.

Group of orthologs #2560. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:79

F6SS10              	100.00%		H3C6P0              	100.00%
                    	       		H3CM42              	12.09%
                    	       		H3CM48              	11.82%
                    	       		H3D0B7              	5.74%
Bootstrap support for F6SS10 as seed ortholog is 100%.
Bootstrap support for H3C6P0 as seed ortholog is 91%.

Group of orthologs #2561. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:48

F6X9C7              	100.00%		H3C243              	100.00%
H2XY34              	8.33%		H3C410              	9.47%
Bootstrap support for F6X9C7 as seed ortholog is 87%.
Bootstrap support for H3C243 as seed ortholog is 77%.

Group of orthologs #2562. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:310

H2XVS3              	100.00%		H3DHA9              	100.00%
                    	       		H3D055              	27.92%
                    	       		H3DA17              	19.16%
Bootstrap support for H2XVS3 as seed ortholog is 100%.
Bootstrap support for H3DHA9 as seed ortholog is 100%.

Group of orthologs #2563. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:122

F6VL03              	100.00%		H3C4F4              	100.00%
Bootstrap support for F6VL03 as seed ortholog is 93%.
Bootstrap support for H3C4F4 as seed ortholog is 99%.

Group of orthologs #2564. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:310

F6XFA8              	100.00%		H3CC70              	100.00%
Bootstrap support for F6XFA8 as seed ortholog is 100%.
Bootstrap support for H3CC70 as seed ortholog is 100%.

Group of orthologs #2565. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 T.nigroviridis:258

F6TVY6              	100.00%		H3CQC5              	100.00%
Bootstrap support for F6TVY6 as seed ortholog is 100%.
Bootstrap support for H3CQC5 as seed ortholog is 100%.

Group of orthologs #2566. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:88

F6SUL1              	100.00%		H3DHV7              	100.00%
Bootstrap support for F6SUL1 as seed ortholog is 99%.
Bootstrap support for H3DHV7 as seed ortholog is 99%.

Group of orthologs #2567. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:209

F6Y7N9              	100.00%		H3DA68              	100.00%
Bootstrap support for F6Y7N9 as seed ortholog is 100%.
Bootstrap support for H3DA68 as seed ortholog is 99%.

Group of orthologs #2568. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:26

F7B9K0              	100.00%		H3CMS2              	100.00%
F6ZNW9              	41.80%		H3D9R8              	41.27%
H2XRT7              	41.65%		H3C3R1              	26.04%
H2Y2D9              	39.69%		H3CVG6              	6.23%
F6TL47              	38.71%		
F6TL65              	33.94%		
F7BB38              	33.66%		
F7A0M9              	19.07%		
F6PUR6              	13.46%		
H2XJM1              	10.94%		
L7N0S0              	10.38%		
H2XXR0              	10.38%		
F6PLM8              	9.68%		
H2XMC8              	8.27%		
H2XVS1              	8.13%		
H2Y171              	8.13%		
F6RLR6              	6.59%		
F6WRT4              	5.75%		
F6QC31              	5.61%		
F6THU3              	5.33%		
Bootstrap support for F7B9K0 as seed ortholog is 97%.
Bootstrap support for H3CMS2 as seed ortholog is 70%.
Alternative seed ortholog is H3BXV6 (26 bits away from this cluster)

Group of orthologs #2569. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 T.nigroviridis:84

F6Z145              	100.00%		H3DHT6              	100.00%
F7B1Z2              	19.27%		H3DC55              	23.08%
Bootstrap support for F6Z145 as seed ortholog is 98%.
Bootstrap support for H3DHT6 as seed ortholog is 97%.

Group of orthologs #2570. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:149

H2Y3H5              	100.00%		H3CNK8              	100.00%
                    	       		H3D4L1              	66.67%
                    	       		H3CLX4              	28.33%
Bootstrap support for H2Y3H5 as seed ortholog is 100%.
Bootstrap support for H3CNK8 as seed ortholog is 100%.

Group of orthologs #2571. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:88

F6PKP1              	100.00%		H3CBS0              	100.00%
                    	       		H3CWQ7              	23.37%
Bootstrap support for F6PKP1 as seed ortholog is 100%.
Bootstrap support for H3CBS0 as seed ortholog is 99%.

Group of orthologs #2572. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

F6STW3              	100.00%		H3D1I3              	100.00%
                    	       		H3D4V9              	18.71%
Bootstrap support for F6STW3 as seed ortholog is 100%.
Bootstrap support for H3D1I3 as seed ortholog is 100%.

Group of orthologs #2573. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:144

H2XPI4              	100.00%		H3CY89              	100.00%
F6S5C8              	96.04%		
Bootstrap support for H2XPI4 as seed ortholog is 100%.
Bootstrap support for H3CY89 as seed ortholog is 99%.

Group of orthologs #2574. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

H2XUT2              	100.00%		H3D5G6              	100.00%
                    	       		H3C250              	24.77%
Bootstrap support for H2XUT2 as seed ortholog is 100%.
Bootstrap support for H3D5G6 as seed ortholog is 100%.

Group of orthologs #2575. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:99

F6RD45              	100.00%		H3CRC3              	100.00%
Bootstrap support for F6RD45 as seed ortholog is 100%.
Bootstrap support for H3CRC3 as seed ortholog is 99%.

Group of orthologs #2576. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

F6QAK1              	100.00%		H3CVY1              	100.00%
Bootstrap support for F6QAK1 as seed ortholog is 100%.
Bootstrap support for H3CVY1 as seed ortholog is 100%.

Group of orthologs #2577. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

F6WW79              	100.00%		H3CB03              	100.00%
Bootstrap support for F6WW79 as seed ortholog is 100%.
Bootstrap support for H3CB03 as seed ortholog is 100%.

Group of orthologs #2578. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

F6TYL9              	100.00%		H3D669              	100.00%
Bootstrap support for F6TYL9 as seed ortholog is 100%.
Bootstrap support for H3D669 as seed ortholog is 100%.

Group of orthologs #2579. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:50

H2XL87              	100.00%		H3CFY0              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 100%.
Bootstrap support for H3CFY0 as seed ortholog is 99%.

Group of orthologs #2580. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

H2XZK6              	100.00%		H3C6U2              	100.00%
Bootstrap support for H2XZK6 as seed ortholog is 100%.
Bootstrap support for H3C6U2 as seed ortholog is 100%.

Group of orthologs #2581. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:239

F6U8U5              	100.00%		H3DN50              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 100%.
Bootstrap support for H3DN50 as seed ortholog is 100%.

Group of orthologs #2582. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

F6UK51              	100.00%		Q4T9N8              	100.00%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for Q4T9N8 as seed ortholog is 100%.

Group of orthologs #2583. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 T.nigroviridis:309

F7BI62              	100.00%		H3DCR4              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for H3DCR4 as seed ortholog is 100%.

Group of orthologs #2584. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:108

F6TMZ9              	100.00%		H3DL99              	100.00%
                    	       		H3CRX8              	68.43%
                    	       		H3DB78              	56.91%
                    	       		H3DAW6              	44.72%
                    	       		H3CDD8              	9.89%
                    	       		H3D6Z8              	8.13%
                    	       		H3CI17              	7.86%
Bootstrap support for F6TMZ9 as seed ortholog is 95%.
Bootstrap support for H3DL99 as seed ortholog is 99%.

Group of orthologs #2585. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:308

H2Y050              	100.00%		H3D2V6              	100.00%
                    	       		H3CEL1              	27.88%
                    	       		H3DIY1              	5.92%
Bootstrap support for H2Y050 as seed ortholog is 100%.
Bootstrap support for H3D2V6 as seed ortholog is 100%.

Group of orthologs #2586. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:267

F6QST8              	100.00%		H3CVW5              	100.00%
                    	       		H3DDK8              	25.41%
Bootstrap support for F6QST8 as seed ortholog is 100%.
Bootstrap support for H3CVW5 as seed ortholog is 100%.

Group of orthologs #2587. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:308

F6S4Q0              	100.00%		H3D419              	100.00%
F6U8Z7              	100.00%		
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for F6U8Z7 as seed ortholog is 100%.
Bootstrap support for H3D419 as seed ortholog is 100%.

Group of orthologs #2588. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:186

F6V2M0              	100.00%		H3CWD3              	100.00%
                    	       		H3D9U1              	11.28%
Bootstrap support for F6V2M0 as seed ortholog is 99%.
Bootstrap support for H3CWD3 as seed ortholog is 99%.

Group of orthologs #2589. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:17

F6SA38              	100.00%		H3CWA9              	100.00%
Bootstrap support for F6SA38 as seed ortholog is 100%.
Bootstrap support for H3CWA9 as seed ortholog is 60%.
Alternative seed ortholog is H3C1I7 (17 bits away from this cluster)

Group of orthologs #2590. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:308

F6ZGU5              	100.00%		H3CIG6              	100.00%
Bootstrap support for F6ZGU5 as seed ortholog is 100%.
Bootstrap support for H3CIG6 as seed ortholog is 100%.

Group of orthologs #2591. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:308

F6PH23              	100.00%		H3DIT3              	100.00%
Bootstrap support for F6PH23 as seed ortholog is 100%.
Bootstrap support for H3DIT3 as seed ortholog is 100%.

Group of orthologs #2592. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:224

F6YR71              	100.00%		H3DB65              	100.00%
Bootstrap support for F6YR71 as seed ortholog is 100%.
Bootstrap support for H3DB65 as seed ortholog is 100%.

Group of orthologs #2593. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:308

F7BMQ6              	100.00%		H3D2M7              	100.00%
Bootstrap support for F7BMQ6 as seed ortholog is 100%.
Bootstrap support for H3D2M7 as seed ortholog is 100%.

Group of orthologs #2594. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:95

F7AZY9              	100.00%		H3DMV4              	100.00%
Bootstrap support for F7AZY9 as seed ortholog is 100%.
Bootstrap support for H3DMV4 as seed ortholog is 89%.

Group of orthologs #2595. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 T.nigroviridis:308

H2XX99              	100.00%		H3D9D3              	100.00%
Bootstrap support for H2XX99 as seed ortholog is 100%.
Bootstrap support for H3D9D3 as seed ortholog is 100%.

Group of orthologs #2596. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:206

F6X4P6              	100.00%		H3CS99              	100.00%
                    	       		H3C475              	53.45%
                    	       		H3DHS9              	20.53%
Bootstrap support for F6X4P6 as seed ortholog is 100%.
Bootstrap support for H3CS99 as seed ortholog is 100%.

Group of orthologs #2597. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:60

Q4H2X6              	100.00%		H3DCC4              	100.00%
                    	       		H3CL54              	26.06%
                    	       		H3BZ42              	21.23%
Bootstrap support for Q4H2X6 as seed ortholog is 100%.
Bootstrap support for H3DCC4 as seed ortholog is 94%.

Group of orthologs #2598. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:307

F6SVU6              	100.00%		H3BVL1              	100.00%
L7N0U5              	52.04%		
Bootstrap support for F6SVU6 as seed ortholog is 94%.
Bootstrap support for H3BVL1 as seed ortholog is 100%.

Group of orthologs #2599. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:307

F6WEK5              	100.00%		H3D6C7              	100.00%
                    	       		H3CQ20              	41.43%
Bootstrap support for F6WEK5 as seed ortholog is 100%.
Bootstrap support for H3D6C7 as seed ortholog is 100%.

Group of orthologs #2600. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:142

F7AG96              	100.00%		H3CTI4              	100.00%
                    	       		H3CR18              	28.32%
Bootstrap support for F7AG96 as seed ortholog is 100%.
Bootstrap support for H3CTI4 as seed ortholog is 100%.

Group of orthologs #2601. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:91

F6WKA4              	100.00%		H3DC73              	100.00%
                    	       		H3DI33              	21.89%
Bootstrap support for F6WKA4 as seed ortholog is 99%.
Bootstrap support for H3DC73 as seed ortholog is 97%.

Group of orthologs #2602. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6R046              	100.00%		H3C9W9              	100.00%
Bootstrap support for F6R046 as seed ortholog is 100%.
Bootstrap support for H3C9W9 as seed ortholog is 100%.

Group of orthologs #2603. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6UCW1              	100.00%		H3C888              	100.00%
Bootstrap support for F6UCW1 as seed ortholog is 100%.
Bootstrap support for H3C888 as seed ortholog is 100%.

Group of orthologs #2604. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6SMS0              	100.00%		H3CT94              	100.00%
Bootstrap support for F6SMS0 as seed ortholog is 100%.
Bootstrap support for H3CT94 as seed ortholog is 100%.

Group of orthologs #2605. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6S4X9              	100.00%		H3CYS5              	100.00%
Bootstrap support for F6S4X9 as seed ortholog is 100%.
Bootstrap support for H3CYS5 as seed ortholog is 100%.

Group of orthologs #2606. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6S593              	100.00%		H3D6Q4              	100.00%
Bootstrap support for F6S593 as seed ortholog is 100%.
Bootstrap support for H3D6Q4 as seed ortholog is 100%.

Group of orthologs #2607. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6X4T0              	100.00%		H3CZE7              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for H3CZE7 as seed ortholog is 100%.

Group of orthologs #2608. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6RPC5              	100.00%		H3DN33              	100.00%
Bootstrap support for F6RPC5 as seed ortholog is 100%.
Bootstrap support for H3DN33 as seed ortholog is 100%.

Group of orthologs #2609. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:148

F6VUE2              	100.00%		H3DAR4              	100.00%
Bootstrap support for F6VUE2 as seed ortholog is 99%.
Bootstrap support for H3DAR4 as seed ortholog is 99%.

Group of orthologs #2610. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F7ASB0              	100.00%		H3CX92              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for H3CX92 as seed ortholog is 100%.

Group of orthologs #2611. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

H2XT29              	100.00%		H3CG65              	100.00%
Bootstrap support for H2XT29 as seed ortholog is 100%.
Bootstrap support for H3CG65 as seed ortholog is 100%.

Group of orthologs #2612. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

F6XNV2              	100.00%		H3DH57              	100.00%
Bootstrap support for F6XNV2 as seed ortholog is 100%.
Bootstrap support for H3DH57 as seed ortholog is 100%.

Group of orthologs #2613. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

H2XMQ4              	100.00%		Q4SG74              	100.00%
Bootstrap support for H2XMQ4 as seed ortholog is 100%.
Bootstrap support for Q4SG74 as seed ortholog is 100%.

Group of orthologs #2614. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

H2XXM2              	100.00%		H3DPA4              	100.00%
Bootstrap support for H2XXM2 as seed ortholog is 100%.
Bootstrap support for H3DPA4 as seed ortholog is 100%.

Group of orthologs #2615. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:307

Q69HS7              	100.00%		H3DFL3              	100.00%
Bootstrap support for Q69HS7 as seed ortholog is 100%.
Bootstrap support for H3DFL3 as seed ortholog is 100%.

Group of orthologs #2616. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 T.nigroviridis:248

Q1RLC3              	100.00%		H3DHV6              	100.00%
Bootstrap support for Q1RLC3 as seed ortholog is 100%.
Bootstrap support for H3DHV6 as seed ortholog is 100%.

Group of orthologs #2617. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:82

F6YZB7              	100.00%		H3CA66              	100.00%
F6Q7A1              	55.87%		
F7BIZ0              	23.72%		
F6VZ78              	20.92%		
Bootstrap support for F6YZB7 as seed ortholog is 99%.
Bootstrap support for H3CA66 as seed ortholog is 99%.

Group of orthologs #2618. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:306

F6S0S0              	100.00%		H3CG24              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for H3CG24 as seed ortholog is 100%.

Group of orthologs #2619. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:306

F6U182              	100.00%		H3D1U5              	100.00%
Bootstrap support for F6U182 as seed ortholog is 100%.
Bootstrap support for H3D1U5 as seed ortholog is 100%.

Group of orthologs #2620. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:306

F6WGS7              	100.00%		H3DF00              	100.00%
Bootstrap support for F6WGS7 as seed ortholog is 100%.
Bootstrap support for H3DF00 as seed ortholog is 100%.

Group of orthologs #2621. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 T.nigroviridis:306

F6RRD5              	100.00%		Q4TBF8              	100.00%
Bootstrap support for F6RRD5 as seed ortholog is 100%.
Bootstrap support for Q4TBF8 as seed ortholog is 100%.

Group of orthologs #2622. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:87

H2Y1M2              	100.00%		H3C9X7              	100.00%
Bootstrap support for H2Y1M2 as seed ortholog is 99%.
Bootstrap support for H3C9X7 as seed ortholog is 99%.

Group of orthologs #2623. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:85

H2XMX1              	100.00%		H3CZ02              	100.00%
                    	       		H3CUC6              	63.35%
                    	       		H3D791              	7.47%
Bootstrap support for H2XMX1 as seed ortholog is 100%.
Bootstrap support for H3CZ02 as seed ortholog is 99%.

Group of orthologs #2624. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:162

Q5IFL5              	100.00%		H3CVQ4              	100.00%
                    	       		H3DLI4              	34.22%
                    	       		H3DK31              	30.50%
Bootstrap support for Q5IFL5 as seed ortholog is 100%.
Bootstrap support for H3CVQ4 as seed ortholog is 99%.

Group of orthologs #2625. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:58

F6QQE0              	100.00%		H3CR51              	100.00%
                    	       		H3DGC0              	14.49%
Bootstrap support for F6QQE0 as seed ortholog is 100%.
Bootstrap support for H3CR51 as seed ortholog is 78%.

Group of orthologs #2626. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:305

F6W023              	100.00%		H3CVY8              	100.00%
                    	       		H3CC08              	17.69%
Bootstrap support for F6W023 as seed ortholog is 100%.
Bootstrap support for H3CVY8 as seed ortholog is 100%.

Group of orthologs #2627. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:55

F6USY0              	100.00%		H3D794              	100.00%
                    	       		H3DH66              	100.00%
Bootstrap support for F6USY0 as seed ortholog is 74%.
Alternative seed ortholog is F6SIL2 (138 bits away from this cluster)
Bootstrap support for H3D794 as seed ortholog is 92%.
Bootstrap support for H3DH66 as seed ortholog is 89%.

Group of orthologs #2628. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:232

F7AXZ4              	100.00%		H3D050              	100.00%
                    	       		H3CNL8              	7.40%
Bootstrap support for F7AXZ4 as seed ortholog is 100%.
Bootstrap support for H3D050 as seed ortholog is 100%.

Group of orthologs #2629. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:305

F6Q5U4              	100.00%		H3CC05              	100.00%
Bootstrap support for F6Q5U4 as seed ortholog is 100%.
Bootstrap support for H3CC05 as seed ortholog is 100%.

Group of orthologs #2630. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:305

F6Q4K7              	100.00%		H3CLL9              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for H3CLL9 as seed ortholog is 100%.

Group of orthologs #2631. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:305

F6ZII8              	100.00%		H3C5F4              	100.00%
Bootstrap support for F6ZII8 as seed ortholog is 100%.
Bootstrap support for H3C5F4 as seed ortholog is 100%.

Group of orthologs #2632. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:196

F6PZV6              	100.00%		H3D618              	100.00%
Bootstrap support for F6PZV6 as seed ortholog is 100%.
Bootstrap support for H3D618 as seed ortholog is 99%.

Group of orthologs #2633. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:305

F7BHG2              	100.00%		H3CCR6              	100.00%
Bootstrap support for F7BHG2 as seed ortholog is 100%.
Bootstrap support for H3CCR6 as seed ortholog is 100%.

Group of orthologs #2634. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:165

F6XGG4              	100.00%		H3D185              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 100%.
Bootstrap support for H3D185 as seed ortholog is 100%.

Group of orthologs #2635. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:47

F6VCD8              	100.00%		H3DFM2              	100.00%
Bootstrap support for F6VCD8 as seed ortholog is 99%.
Bootstrap support for H3DFM2 as seed ortholog is 93%.

Group of orthologs #2636. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:305

H2XQR1              	100.00%		H3CSZ0              	100.00%
Bootstrap support for H2XQR1 as seed ortholog is 100%.
Bootstrap support for H3CSZ0 as seed ortholog is 100%.

Group of orthologs #2637. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 T.nigroviridis:305

H2XS53              	100.00%		H3D3G6              	100.00%
Bootstrap support for H2XS53 as seed ortholog is 72%.
Alternative seed ortholog is F6ZIX6 (20 bits away from this cluster)
Bootstrap support for H3D3G6 as seed ortholog is 100%.

Group of orthologs #2638. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 T.nigroviridis:62

F6YAY9              	100.00%		Q4S033              	100.00%
Bootstrap support for F6YAY9 as seed ortholog is 100%.
Bootstrap support for Q4S033 as seed ortholog is 98%.

Group of orthologs #2639. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:143

H2XVE2              	100.00%		H3C474              	100.00%
H2Y2K3              	31.25%		H3BWI4              	24.47%
H2Y0Z7              	29.03%		
H2XPY7              	20.00%		
Bootstrap support for H2XVE2 as seed ortholog is 99%.
Bootstrap support for H3C474 as seed ortholog is 99%.

Group of orthologs #2640. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:176

Q1RLB1              	100.00%		H3CH44              	100.00%
                    	       		Q4SZL6              	10.57%
                    	       		H3DKF4              	6.34%
Bootstrap support for Q1RLB1 as seed ortholog is 100%.
Bootstrap support for H3CH44 as seed ortholog is 99%.

Group of orthologs #2641. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 T.nigroviridis:212

F6QZM4              	100.00%		H3CZA0              	100.00%
                    	       		H3DDE1              	37.70%
Bootstrap support for F6QZM4 as seed ortholog is 47%.
Alternative seed ortholog is H2XP52 (2 bits away from this cluster)
Bootstrap support for H3CZA0 as seed ortholog is 100%.

Group of orthologs #2642. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F6VF91              	100.00%		H3CAN9              	100.00%
Bootstrap support for F6VF91 as seed ortholog is 100%.
Bootstrap support for H3CAN9 as seed ortholog is 100%.

Group of orthologs #2643. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F6R407              	100.00%		H3CQD1              	100.00%
Bootstrap support for F6R407 as seed ortholog is 100%.
Bootstrap support for H3CQD1 as seed ortholog is 100%.

Group of orthologs #2644. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:113

F6RJT7              	100.00%		H3D7A6              	100.00%
Bootstrap support for F6RJT7 as seed ortholog is 100%.
Bootstrap support for H3D7A6 as seed ortholog is 99%.

Group of orthologs #2645. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F7B310              	100.00%		H3CBW2              	100.00%
Bootstrap support for F7B310 as seed ortholog is 100%.
Bootstrap support for H3CBW2 as seed ortholog is 100%.

Group of orthologs #2646. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F7B1W3              	100.00%		H3CG04              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for H3CG04 as seed ortholog is 100%.

Group of orthologs #2647. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F6THX7              	100.00%		H3DHR7              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for H3DHR7 as seed ortholog is 100%.

Group of orthologs #2648. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F6YXK3              	100.00%		H3D356              	100.00%
Bootstrap support for F6YXK3 as seed ortholog is 100%.
Bootstrap support for H3D356 as seed ortholog is 100%.

Group of orthologs #2649. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F6TB52              	100.00%		Q4SJL7              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for Q4SJL7 as seed ortholog is 100%.

Group of orthologs #2650. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

F6ZL64              	100.00%		H3DBS7              	100.00%
Bootstrap support for F6ZL64 as seed ortholog is 100%.
Bootstrap support for H3DBS7 as seed ortholog is 100%.

Group of orthologs #2651. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

H2XSN5              	100.00%		H3D5L3              	100.00%
Bootstrap support for H2XSN5 as seed ortholog is 100%.
Bootstrap support for H3D5L3 as seed ortholog is 100%.

Group of orthologs #2652. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 T.nigroviridis:304

Q8HIM8              	100.00%		Q4JQH7              	100.00%
Bootstrap support for Q8HIM8 as seed ortholog is 100%.
Bootstrap support for Q4JQH7 as seed ortholog is 100%.

Group of orthologs #2653. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:33

F6S855              	100.00%		H3D1C3              	100.00%
F6S880              	100.00%		H3D810              	100.00%
F6XUY3              	49.04%		H3CRS2              	38.72%
F6W3Q9              	17.52%		H3CRS1              	22.90%
                    	       		H3CB88              	12.57%
Bootstrap support for F6S855 as seed ortholog is 99%.
Bootstrap support for F6S880 as seed ortholog is 99%.
Bootstrap support for H3D1C3 as seed ortholog is 82%.
Bootstrap support for H3D810 as seed ortholog is 66%.
Alternative seed ortholog is H3D3W2 (33 bits away from this cluster)

Group of orthologs #2654. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:303

F6U8F8              	100.00%		H3BWT3              	100.00%
                    	       		H3CHT7              	5.57%
Bootstrap support for F6U8F8 as seed ortholog is 100%.
Bootstrap support for H3BWT3 as seed ortholog is 100%.

Group of orthologs #2655. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:303

F6U1Z4              	100.00%		H3DAJ8              	100.00%
                    	       		Q4RYW0              	67.12%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for H3DAJ8 as seed ortholog is 100%.

Group of orthologs #2656. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:28

F7B397              	100.00%		H3C225              	100.00%
Bootstrap support for F7B397 as seed ortholog is 100%.
Bootstrap support for H3C225 as seed ortholog is 11%.
Alternative seed ortholog is H3DQ83 (28 bits away from this cluster)

Group of orthologs #2657. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 T.nigroviridis:227

F6QC45              	100.00%		H3D7M4              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 100%.
Bootstrap support for H3D7M4 as seed ortholog is 100%.

Group of orthologs #2658. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:303

F7BMB7              	100.00%		H3C3W6              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 100%.
Bootstrap support for H3C3W6 as seed ortholog is 100%.

Group of orthologs #2659. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:303

F6YI87              	100.00%		H3CP24              	100.00%
Bootstrap support for F6YI87 as seed ortholog is 99%.
Bootstrap support for H3CP24 as seed ortholog is 100%.

Group of orthologs #2660. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:70

F6T453              	100.00%		H3D687              	100.00%
Bootstrap support for F6T453 as seed ortholog is 100%.
Bootstrap support for H3D687 as seed ortholog is 96%.

Group of orthologs #2661. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:303

F6ZGT8              	100.00%		H3CXK2              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for H3CXK2 as seed ortholog is 100%.

Group of orthologs #2662. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:101

H2XPX2              	100.00%		H3CKM2              	100.00%
Bootstrap support for H2XPX2 as seed ortholog is 100%.
Bootstrap support for H3CKM2 as seed ortholog is 97%.

Group of orthologs #2663. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:303

F6ZK09              	100.00%		H3DJ08              	100.00%
Bootstrap support for F6ZK09 as seed ortholog is 100%.
Bootstrap support for H3DJ08 as seed ortholog is 100%.

Group of orthologs #2664. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 T.nigroviridis:303

H2XZJ6              	100.00%		H3CW84              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for H3CW84 as seed ortholog is 100%.

Group of orthologs #2665. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:13

F6W8H6              	100.00%		H3DNV2              	100.00%
F6VYD7              	80.20%		H3CMC7              	10.63%
H2XSP5              	47.44%		H3C9Z8              	8.67%
Bootstrap support for F6W8H6 as seed ortholog is 87%.
Bootstrap support for H3DNV2 as seed ortholog is 56%.
Alternative seed ortholog is H3BXV6 (13 bits away from this cluster)

Group of orthologs #2666. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

F6WRB6              	100.00%		H3C5L6              	100.00%
                    	       		H3DDB6              	20.78%
Bootstrap support for F6WRB6 as seed ortholog is 100%.
Bootstrap support for H3C5L6 as seed ortholog is 100%.

Group of orthologs #2667. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:103

F7APE7              	100.00%		H3D2B6              	100.00%
                    	       		H3DKG3              	11.45%
Bootstrap support for F7APE7 as seed ortholog is 99%.
Bootstrap support for H3D2B6 as seed ortholog is 99%.

Group of orthologs #2668. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:198

H2XME3              	100.00%		H3D2Z1              	100.00%
                    	       		H3DH13              	38.04%
Bootstrap support for H2XME3 as seed ortholog is 100%.
Bootstrap support for H3D2Z1 as seed ortholog is 100%.

Group of orthologs #2669. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

F6VI88              	100.00%		H3CCM1              	100.00%
Bootstrap support for F6VI88 as seed ortholog is 100%.
Bootstrap support for H3CCM1 as seed ortholog is 100%.

Group of orthologs #2670. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

F6RAN6              	100.00%		H3CRI5              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for H3CRI5 as seed ortholog is 100%.

Group of orthologs #2671. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

F6RHG2              	100.00%		H3D4C5              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for H3D4C5 as seed ortholog is 100%.

Group of orthologs #2672. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:214

F7AE45              	100.00%		H3CVQ9              	100.00%
Bootstrap support for F7AE45 as seed ortholog is 99%.
Bootstrap support for H3CVQ9 as seed ortholog is 100%.

Group of orthologs #2673. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

F6UFY6              	100.00%		H3DH86              	100.00%
Bootstrap support for F6UFY6 as seed ortholog is 100%.
Bootstrap support for H3DH86 as seed ortholog is 100%.

Group of orthologs #2674. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

F6QQ08              	100.00%		Q4T2X8              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for Q4T2X8 as seed ortholog is 100%.

Group of orthologs #2675. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:154

F7AUS4              	100.00%		H3D971              	100.00%
Bootstrap support for F7AUS4 as seed ortholog is 100%.
Bootstrap support for H3D971 as seed ortholog is 100%.

Group of orthologs #2676. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 T.nigroviridis:302

H2XRW4              	100.00%		Q4S3J4              	100.00%
Bootstrap support for H2XRW4 as seed ortholog is 100%.
Bootstrap support for Q4S3J4 as seed ortholog is 100%.

Group of orthologs #2677. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:78

F6XNK4              	100.00%		H3CGE9              	100.00%
Bootstrap support for F6XNK4 as seed ortholog is 100%.
Bootstrap support for H3CGE9 as seed ortholog is 98%.

Group of orthologs #2678. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 T.nigroviridis:152

F7BHL8              	100.00%		H3CJH5              	100.00%
Bootstrap support for F7BHL8 as seed ortholog is 100%.
Bootstrap support for H3CJH5 as seed ortholog is 99%.

Group of orthologs #2679. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:161

F7B9X1              	100.00%		H3DDS7              	100.00%
Bootstrap support for F7B9X1 as seed ortholog is 99%.
Bootstrap support for H3DDS7 as seed ortholog is 100%.

Group of orthologs #2680. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:65

F6RRU7              	100.00%		H3CAX7              	100.00%
F6RLA4              	51.30%		H3CR71              	29.19%
Bootstrap support for F6RRU7 as seed ortholog is 100%.
Bootstrap support for H3CAX7 as seed ortholog is 87%.

Group of orthologs #2681. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:300

F6TI40              	100.00%		H3DDJ1              	100.00%
H2XMY4              	7.52%		
F6TI69              	6.27%		
Bootstrap support for F6TI40 as seed ortholog is 100%.
Bootstrap support for H3DDJ1 as seed ortholog is 100%.

Group of orthologs #2682. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:35

F7AQZ5              	100.00%		H3CYL1              	100.00%
F7AR10              	78.35%		H3D5K6              	6.61%
Bootstrap support for F7AQZ5 as seed ortholog is 100%.
Bootstrap support for H3CYL1 as seed ortholog is 80%.

Group of orthologs #2683. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:164

F6Q1G7              	100.00%		H3DH67              	100.00%
                    	       		H3CDT6              	40.47%
Bootstrap support for F6Q1G7 as seed ortholog is 99%.
Bootstrap support for H3DH67 as seed ortholog is 100%.

Group of orthologs #2684. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:300

F6RGF8              	100.00%		H3CBC2              	100.00%
Bootstrap support for F6RGF8 as seed ortholog is 100%.
Bootstrap support for H3CBC2 as seed ortholog is 100%.

Group of orthologs #2685. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:300

F6SSL3              	100.00%		H3DBB7              	100.00%
Bootstrap support for F6SSL3 as seed ortholog is 100%.
Bootstrap support for H3DBB7 as seed ortholog is 100%.

Group of orthologs #2686. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:300

F7AAL8              	100.00%		H3D960              	100.00%
Bootstrap support for F7AAL8 as seed ortholog is 100%.
Bootstrap support for H3D960 as seed ortholog is 100%.

Group of orthologs #2687. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:300

H2XY83              	100.00%		H3CTS2              	100.00%
Bootstrap support for H2XY83 as seed ortholog is 100%.
Bootstrap support for H3CTS2 as seed ortholog is 100%.

Group of orthologs #2688. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 T.nigroviridis:229

H2XW94              	100.00%		H3D3L1              	100.00%
Bootstrap support for H2XW94 as seed ortholog is 76%.
Bootstrap support for H3D3L1 as seed ortholog is 100%.

Group of orthologs #2689. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 T.nigroviridis:300

F7ARU3              	100.00%		H3DR02              	100.00%
Bootstrap support for F7ARU3 as seed ortholog is 100%.
Bootstrap support for H3DR02 as seed ortholog is 100%.

Group of orthologs #2690. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:110

H2XRD4              	100.00%		Q4S0U5              	100.00%
Bootstrap support for H2XRD4 as seed ortholog is 100%.
Bootstrap support for Q4S0U5 as seed ortholog is 100%.

Group of orthologs #2691. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:299

H2XTA5              	100.00%		H3DG29              	100.00%
F6R8R2              	31.92%		
F6R8U2              	28.34%		
F6YNP9              	23.71%		
F7ARX5              	22.78%		
F6UCV3              	21.32%		
H2XZG6              	21.06%		
F6XF34              	12.32%		
Bootstrap support for H2XTA5 as seed ortholog is 100%.
Bootstrap support for H3DG29 as seed ortholog is 100%.

Group of orthologs #2692. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:42

F6PK93              	100.00%		H3CSS8              	100.00%
F6UPT3              	15.84%		H3DB79              	9.87%
Bootstrap support for F6PK93 as seed ortholog is 99%.
Bootstrap support for H3CSS8 as seed ortholog is 81%.

Group of orthologs #2693. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:183

F6VKX1              	100.00%		H3CNB9              	100.00%
                    	       		H3CPY6              	23.48%
Bootstrap support for F6VKX1 as seed ortholog is 100%.
Bootstrap support for H3CNB9 as seed ortholog is 100%.

Group of orthologs #2694. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:299

F7AKV8              	100.00%		H3DJD1              	100.00%
                    	       		H3C7R8              	21.67%
Bootstrap support for F7AKV8 as seed ortholog is 100%.
Bootstrap support for H3DJD1 as seed ortholog is 100%.

Group of orthologs #2695. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:299

F6SFM0              	100.00%		H3CHH0              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 100%.
Bootstrap support for H3CHH0 as seed ortholog is 100%.

Group of orthologs #2696. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:299

F6TI55              	100.00%		H3CH16              	100.00%
Bootstrap support for F6TI55 as seed ortholog is 100%.
Bootstrap support for H3CH16 as seed ortholog is 100%.

Group of orthologs #2697. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:299

F6SR47              	100.00%		H3CX11              	100.00%
Bootstrap support for F6SR47 as seed ortholog is 100%.
Bootstrap support for H3CX11 as seed ortholog is 100%.

Group of orthologs #2698. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:299

F6SNL0              	100.00%		Q4TBS0              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for Q4TBS0 as seed ortholog is 100%.

Group of orthologs #2699. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 T.nigroviridis:299

F7A5A0              	100.00%		Q4SVD2              	100.00%
Bootstrap support for F7A5A0 as seed ortholog is 100%.
Bootstrap support for Q4SVD2 as seed ortholog is 100%.

Group of orthologs #2700. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:82

H2Y1B6              	100.00%		H3DQL6              	100.00%
Bootstrap support for H2Y1B6 as seed ortholog is 99%.
Bootstrap support for H3DQL6 as seed ortholog is 99%.

Group of orthologs #2701. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:95

F7AVZ3              	100.00%		H3D053              	100.00%
                    	       		H3CW72              	16.59%
                    	       		H3DL54              	11.50%
                    	       		H3CLR8              	7.52%
Bootstrap support for F7AVZ3 as seed ortholog is 48%.
Alternative seed ortholog is F6XAM7 (3 bits away from this cluster)
Bootstrap support for H3D053 as seed ortholog is 98%.

Group of orthologs #2702. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 T.nigroviridis:298

H2XUS4              	100.00%		H3DQ01              	100.00%
Bootstrap support for H2XUS4 as seed ortholog is 100%.
Bootstrap support for H3DQ01 as seed ortholog is 100%.

Group of orthologs #2703. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:51

F6YLB5              	100.00%		H3C0M6              	100.00%
F6WIM7              	8.45%		H3BYS6              	23.94%
                    	       		H3D9T3              	23.58%
                    	       		H3D9T6              	14.99%
                    	       		H3DCZ1              	12.82%
Bootstrap support for F6YLB5 as seed ortholog is 83%.
Bootstrap support for H3C0M6 as seed ortholog is 84%.

Group of orthologs #2704. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 T.nigroviridis:297

F6XKZ6              	100.00%		H3CR93              	100.00%
                    	       		H3CV31              	10.49%
Bootstrap support for F6XKZ6 as seed ortholog is 100%.
Bootstrap support for H3CR93 as seed ortholog is 100%.

Group of orthologs #2705. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 T.nigroviridis:219

H2XZG7              	100.00%		H3CWS9              	100.00%
                    	       		H3CFX7              	86.67%
Bootstrap support for H2XZG7 as seed ortholog is 100%.
Bootstrap support for H3CWS9 as seed ortholog is 100%.

Group of orthologs #2706. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 T.nigroviridis:297

H2XLJ5              	100.00%		H3C676              	100.00%
Bootstrap support for H2XLJ5 as seed ortholog is 100%.
Bootstrap support for H3C676 as seed ortholog is 100%.

Group of orthologs #2707. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 T.nigroviridis:165

H2XNL6              	100.00%		H3C6U4              	100.00%
Bootstrap support for H2XNL6 as seed ortholog is 100%.
Bootstrap support for H3C6U4 as seed ortholog is 99%.

Group of orthologs #2708. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 T.nigroviridis:297

F6ZT40              	100.00%		H3CUV8              	100.00%
Bootstrap support for F6ZT40 as seed ortholog is 100%.
Bootstrap support for H3CUV8 as seed ortholog is 100%.

Group of orthologs #2709. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 T.nigroviridis:297

F6XGT9              	100.00%		H3DJR5              	100.00%
Bootstrap support for F6XGT9 as seed ortholog is 100%.
Bootstrap support for H3DJR5 as seed ortholog is 100%.

Group of orthologs #2710. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:217

F6PTH0              	100.00%		H3CT20              	100.00%
F6PTW3              	45.85%		H3DFN3              	45.29%
F6PUC9              	32.20%		
F6RPI4              	31.22%		
F6RPK0              	16.59%		
Bootstrap support for F6PTH0 as seed ortholog is 100%.
Bootstrap support for H3CT20 as seed ortholog is 100%.

Group of orthologs #2711. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:51

Q4H3F5              	100.00%		H3D0L5              	100.00%
                    	       		H3CDJ6              	17.30%
Bootstrap support for Q4H3F5 as seed ortholog is 100%.
Bootstrap support for H3D0L5 as seed ortholog is 94%.

Group of orthologs #2712. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:296

F6Y1Z7              	100.00%		H3CS51              	100.00%
Bootstrap support for F6Y1Z7 as seed ortholog is 100%.
Bootstrap support for H3CS51 as seed ortholog is 100%.

Group of orthologs #2713. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:296

F6VA08              	100.00%		H3D283              	100.00%
Bootstrap support for F6VA08 as seed ortholog is 100%.
Bootstrap support for H3D283 as seed ortholog is 100%.

Group of orthologs #2714. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:296

F6ZAR8              	100.00%		H3DCK0              	100.00%
Bootstrap support for F6ZAR8 as seed ortholog is 100%.
Bootstrap support for H3DCK0 as seed ortholog is 100%.

Group of orthologs #2715. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:296

F6WUH0              	100.00%		H3DN67              	100.00%
Bootstrap support for F6WUH0 as seed ortholog is 100%.
Bootstrap support for H3DN67 as seed ortholog is 100%.

Group of orthologs #2716. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:296

F7BA03              	100.00%		H3DE05              	100.00%
Bootstrap support for F7BA03 as seed ortholog is 100%.
Bootstrap support for H3DE05 as seed ortholog is 100%.

Group of orthologs #2717. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:102

H2XLJ3              	100.00%		Q4SSR9              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 100%.
Bootstrap support for Q4SSR9 as seed ortholog is 100%.

Group of orthologs #2718. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 T.nigroviridis:296

H2XSF2              	100.00%		Q4ST86              	100.00%
Bootstrap support for H2XSF2 as seed ortholog is 100%.
Bootstrap support for Q4ST86 as seed ortholog is 100%.

Group of orthologs #2719. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:93

H2XSV6              	100.00%		H3CYI0              	100.00%
                    	       		H3DBB0              	13.30%
                    	       		H3BX70              	12.60%
Bootstrap support for H2XSV6 as seed ortholog is 100%.
Bootstrap support for H3CYI0 as seed ortholog is 99%.

Group of orthologs #2720. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:295

H2XYP3              	100.00%		H3D3L2              	100.00%
                    	       		H3D9J9              	27.25%
                    	       		H3DCK6              	16.84%
Bootstrap support for H2XYP3 as seed ortholog is 100%.
Bootstrap support for H3D3L2 as seed ortholog is 100%.

Group of orthologs #2721. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:194

Q4H3J8              	100.00%		H3DIL6              	100.00%
                    	       		H3DIG8              	38.22%
                    	       		H3CG57              	5.75%
Bootstrap support for Q4H3J8 as seed ortholog is 100%.
Bootstrap support for H3DIL6 as seed ortholog is 100%.

Group of orthologs #2722. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:295

F6Q3L6              	100.00%		H3CX60              	100.00%
                    	       		H3CDF0              	9.20%
Bootstrap support for F6Q3L6 as seed ortholog is 100%.
Bootstrap support for H3CX60 as seed ortholog is 100%.

Group of orthologs #2723. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:179

F6WCV2              	100.00%		H3BZU9              	100.00%
Bootstrap support for F6WCV2 as seed ortholog is 100%.
Bootstrap support for H3BZU9 as seed ortholog is 100%.

Group of orthologs #2724. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:295

F6VZQ9              	100.00%		H3CHZ9              	100.00%
Bootstrap support for F6VZQ9 as seed ortholog is 100%.
Bootstrap support for H3CHZ9 as seed ortholog is 100%.

Group of orthologs #2725. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:295

F7AG49              	100.00%		H3CZ86              	100.00%
Bootstrap support for F7AG49 as seed ortholog is 100%.
Bootstrap support for H3CZ86 as seed ortholog is 100%.

Group of orthologs #2726. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 T.nigroviridis:220

F7BC45              	100.00%		H3D6M3              	100.00%
Bootstrap support for F7BC45 as seed ortholog is 100%.
Bootstrap support for H3D6M3 as seed ortholog is 100%.

Group of orthologs #2727. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:194

H2Y0T2              	100.00%		H3CMZ9              	100.00%
                    	       		H3D2M0              	44.03%
                    	       		Q4S8T6              	43.08%
                    	       		H3DFN8              	41.82%
Bootstrap support for H2Y0T2 as seed ortholog is 100%.
Bootstrap support for H3CMZ9 as seed ortholog is 100%.

Group of orthologs #2728. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:294

F6V3T4              	100.00%		H3DKP2              	100.00%
                    	       		H3CMS9              	9.66%
Bootstrap support for F6V3T4 as seed ortholog is 100%.
Bootstrap support for H3DKP2 as seed ortholog is 100%.

Group of orthologs #2729. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:223

H2XUL2              	100.00%		H3CKX2              	100.00%
                    	       		H3C9E7              	7.12%
Bootstrap support for H2XUL2 as seed ortholog is 100%.
Bootstrap support for H3CKX2 as seed ortholog is 100%.

Group of orthologs #2730. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:35

F6S6V5              	100.00%		H3CFF3              	100.00%
Bootstrap support for F6S6V5 as seed ortholog is 100%.
Bootstrap support for H3CFF3 as seed ortholog is 97%.

Group of orthologs #2731. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:294

F6PJS6              	100.00%		H3CY23              	100.00%
Bootstrap support for F6PJS6 as seed ortholog is 100%.
Bootstrap support for H3CY23 as seed ortholog is 100%.

Group of orthologs #2732. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:294

F6XPD3              	100.00%		H3CQ66              	100.00%
Bootstrap support for F6XPD3 as seed ortholog is 100%.
Bootstrap support for H3CQ66 as seed ortholog is 100%.

Group of orthologs #2733. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:294

F6SCG1              	100.00%		H3D879              	100.00%
Bootstrap support for F6SCG1 as seed ortholog is 100%.
Bootstrap support for H3D879 as seed ortholog is 100%.

Group of orthologs #2734. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:128

F6ZH30              	100.00%		H3D7G7              	100.00%
Bootstrap support for F6ZH30 as seed ortholog is 100%.
Bootstrap support for H3D7G7 as seed ortholog is 99%.

Group of orthologs #2735. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:294

F6YB67              	100.00%		H3DII2              	100.00%
Bootstrap support for F6YB67 as seed ortholog is 100%.
Bootstrap support for H3DII2 as seed ortholog is 100%.

Group of orthologs #2736. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:129

H2XKN2              	100.00%		H3DIS2              	100.00%
Bootstrap support for H2XKN2 as seed ortholog is 99%.
Bootstrap support for H3DIS2 as seed ortholog is 99%.

Group of orthologs #2737. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 T.nigroviridis:294

H2Y1K5              	100.00%		H3D6T4              	100.00%
Bootstrap support for H2Y1K5 as seed ortholog is 100%.
Bootstrap support for H3D6T4 as seed ortholog is 100%.

Group of orthologs #2738. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:293

F6RCD1              	100.00%		H3DJJ0              	100.00%
                    	       		Q4RWZ8              	13.57%
Bootstrap support for F6RCD1 as seed ortholog is 100%.
Bootstrap support for H3DJJ0 as seed ortholog is 100%.

Group of orthologs #2739. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:110

H2XNI0              	100.00%		H3CWP9              	100.00%
                    	       		H3CCG8              	65.67%
Bootstrap support for H2XNI0 as seed ortholog is 99%.
Bootstrap support for H3CWP9 as seed ortholog is 99%.

Group of orthologs #2740. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:103

F7BLB2              	100.00%		H3D9I2              	100.00%
                    	       		H3D9S8              	9.42%
Bootstrap support for F7BLB2 as seed ortholog is 100%.
Bootstrap support for H3D9I2 as seed ortholog is 98%.

Group of orthologs #2741. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:293

H2XYH1              	100.00%		H3D8L8              	100.00%
F7AAN8              	52.42%		
Bootstrap support for H2XYH1 as seed ortholog is 100%.
Bootstrap support for H3D8L8 as seed ortholog is 100%.

Group of orthologs #2742. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:293

C4B8X6              	100.00%		H3C539              	100.00%
Bootstrap support for C4B8X6 as seed ortholog is 100%.
Bootstrap support for H3C539 as seed ortholog is 100%.

Group of orthologs #2743. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:26

F6UK82              	100.00%		H3C1C1              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 100%.
Bootstrap support for H3C1C1 as seed ortholog is 70%.
Alternative seed ortholog is H3CTP8 (26 bits away from this cluster)

Group of orthologs #2744. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:293

F6RZ52              	100.00%		H3CTS8              	100.00%
Bootstrap support for F6RZ52 as seed ortholog is 100%.
Bootstrap support for H3CTS8 as seed ortholog is 100%.

Group of orthologs #2745. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:293

F7APD9              	100.00%		H3C3R8              	100.00%
Bootstrap support for F7APD9 as seed ortholog is 100%.
Bootstrap support for H3C3R8 as seed ortholog is 100%.

Group of orthologs #2746. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 T.nigroviridis:293

F6YCI4              	100.00%		H3DPZ8              	100.00%
Bootstrap support for F6YCI4 as seed ortholog is 100%.
Bootstrap support for H3DPZ8 as seed ortholog is 100%.

Group of orthologs #2747. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:228

H2XY62              	100.00%		H3DM34              	100.00%
Bootstrap support for H2XY62 as seed ortholog is 100%.
Bootstrap support for H3DM34 as seed ortholog is 100%.

Group of orthologs #2748. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 T.nigroviridis:292

F7BHW5              	100.00%		H3CHT1              	100.00%
Bootstrap support for F7BHW5 as seed ortholog is 100%.
Bootstrap support for H3CHT1 as seed ortholog is 100%.

Group of orthologs #2749. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:97

F6W872              	100.00%		H3D5Z5              	100.00%
Bootstrap support for F6W872 as seed ortholog is 100%.
Bootstrap support for H3D5Z5 as seed ortholog is 99%.

Group of orthologs #2750. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 T.nigroviridis:292

F7B6W8              	100.00%		H3CRD8              	100.00%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for H3CRD8 as seed ortholog is 100%.

Group of orthologs #2751. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 T.nigroviridis:23

F6V2A4              	100.00%		H3DJT1              	100.00%
Bootstrap support for F6V2A4 as seed ortholog is 100%.
Bootstrap support for H3DJT1 as seed ortholog is 76%.

Group of orthologs #2752. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 T.nigroviridis:292

H2Y0Z1              	100.00%		H3CE26              	100.00%
Bootstrap support for H2Y0Z1 as seed ortholog is 100%.
Bootstrap support for H3CE26 as seed ortholog is 100%.

Group of orthologs #2753. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 T.nigroviridis:292

F6U8M8              	100.00%		Q4SFE2              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 100%.
Bootstrap support for Q4SFE2 as seed ortholog is 100%.

Group of orthologs #2754. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:80

F7B7A4              	100.00%		H3DBP3              	100.00%
Bootstrap support for F7B7A4 as seed ortholog is 99%.
Bootstrap support for H3DBP3 as seed ortholog is 98%.

Group of orthologs #2755. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 T.nigroviridis:292

F6YMT8              	100.00%		Q4RLI5              	100.00%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for Q4RLI5 as seed ortholog is 100%.

Group of orthologs #2756. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:102

F6SBR0              	100.00%		H3DHD3              	100.00%
                    	       		H3D8Z4              	48.68%
                    	       		H3C3Q7              	35.53%
                    	       		H3CS77              	30.26%
Bootstrap support for F6SBR0 as seed ortholog is 100%.
Bootstrap support for H3DHD3 as seed ortholog is 100%.

Group of orthologs #2757. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:95

F7AK90              	100.00%		H3BZX9              	100.00%
F7BHT5              	89.78%		H3CS25              	14.49%
Bootstrap support for F7AK90 as seed ortholog is 91%.
Bootstrap support for H3BZX9 as seed ortholog is 99%.

Group of orthologs #2758. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 T.nigroviridis:291

F6RP59              	100.00%		H3CJA9              	100.00%
                    	       		H3DGS4              	25.76%
Bootstrap support for F6RP59 as seed ortholog is 100%.
Bootstrap support for H3CJA9 as seed ortholog is 100%.

Group of orthologs #2759. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:221

F6XSD8              	100.00%		H3CYF2              	100.00%
H2XPB7              	34.81%		
Bootstrap support for F6XSD8 as seed ortholog is 100%.
Bootstrap support for H3CYF2 as seed ortholog is 100%.

Group of orthologs #2760. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:170

F6ZX23              	100.00%		H3CWQ3              	100.00%
                    	       		Q4S9C4              	6.82%
Bootstrap support for F6ZX23 as seed ortholog is 100%.
Bootstrap support for H3CWQ3 as seed ortholog is 100%.

Group of orthologs #2761. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 T.nigroviridis:291

F7BD35              	100.00%		H3DKR0              	100.00%
                    	       		H3CBB7              	13.23%
Bootstrap support for F7BD35 as seed ortholog is 100%.
Bootstrap support for H3DKR0 as seed ortholog is 100%.

Group of orthologs #2762. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 T.nigroviridis:291

F6PZD7              	100.00%		H3CZ89              	100.00%
Bootstrap support for F6PZD7 as seed ortholog is 100%.
Bootstrap support for H3CZ89 as seed ortholog is 100%.

Group of orthologs #2763. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 T.nigroviridis:64

F6TFY3              	100.00%		Q4SLU8              	100.00%
Bootstrap support for F6TFY3 as seed ortholog is 100%.
Bootstrap support for Q4SLU8 as seed ortholog is 99%.

Group of orthologs #2764. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 T.nigroviridis:180

H2XQ36              	100.00%		H3CVJ2              	100.00%
Bootstrap support for H2XQ36 as seed ortholog is 100%.
Bootstrap support for H3CVJ2 as seed ortholog is 100%.

Group of orthologs #2765. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:53

F6ZSP8              	100.00%		H3DMW3              	100.00%
Bootstrap support for F6ZSP8 as seed ortholog is 96%.
Bootstrap support for H3DMW3 as seed ortholog is 89%.

Group of orthologs #2766. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:156

F6SWY4              	100.00%		H3CZJ3              	100.00%
F6Z370              	47.40%		
Bootstrap support for F6SWY4 as seed ortholog is 54%.
Alternative seed ortholog is H2XKK7 (8 bits away from this cluster)
Bootstrap support for H3CZJ3 as seed ortholog is 99%.

Group of orthologs #2767. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:27

F6TR93              	100.00%		H3DBJ0              	100.00%
                    	       		H3CTT6              	26.27%
Bootstrap support for F6TR93 as seed ortholog is 100%.
Bootstrap support for H3DBJ0 as seed ortholog is 65%.
Alternative seed ortholog is H3C4U4 (27 bits away from this cluster)

Group of orthologs #2768. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:105

F6WJT4              	100.00%		H3CKI0              	100.00%
Bootstrap support for F6WJT4 as seed ortholog is 99%.
Bootstrap support for H3CKI0 as seed ortholog is 99%.

Group of orthologs #2769. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:290

H2XRN7              	100.00%		H3C2N3              	100.00%
Bootstrap support for H2XRN7 as seed ortholog is 100%.
Bootstrap support for H3C2N3 as seed ortholog is 100%.

Group of orthologs #2770. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:208

Q1RL32              	100.00%		H3BVL2              	100.00%
Bootstrap support for Q1RL32 as seed ortholog is 100%.
Bootstrap support for H3BVL2 as seed ortholog is 100%.

Group of orthologs #2771. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:290

H2Y152              	100.00%		H3CC45              	100.00%
Bootstrap support for H2Y152 as seed ortholog is 100%.
Bootstrap support for H3CC45 as seed ortholog is 100%.

Group of orthologs #2772. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:290

F6XWZ8              	100.00%		H3DKI5              	100.00%
Bootstrap support for F6XWZ8 as seed ortholog is 100%.
Bootstrap support for H3DKI5 as seed ortholog is 100%.

Group of orthologs #2773. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:290

H2XQ81              	100.00%		Q4RLT9              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for Q4RLT9 as seed ortholog is 100%.

Group of orthologs #2774. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 T.nigroviridis:172

H2Y299              	100.00%		H3DGI5              	100.00%
Bootstrap support for H2Y299 as seed ortholog is 100%.
Bootstrap support for H3DGI5 as seed ortholog is 99%.

Group of orthologs #2775. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 T.nigroviridis:17

F6T2C1              	100.00%		H3CDX1              	100.00%
                    	       		H3CQN4              	100.00%
Bootstrap support for F6T2C1 as seed ortholog is 49%.
Alternative seed ortholog is F6T2A6 (1 bits away from this cluster)
Bootstrap support for H3CDX1 as seed ortholog is 98%.
Bootstrap support for H3CQN4 as seed ortholog is 98%.

Group of orthologs #2776. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:289

F6TKP9              	100.00%		H3CNY2              	100.00%
F6UZT3              	36.95%		
Bootstrap support for F6TKP9 as seed ortholog is 92%.
Bootstrap support for H3CNY2 as seed ortholog is 100%.

Group of orthologs #2777. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 T.nigroviridis:289

F6RD37              	100.00%		H3D1J2              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for H3D1J2 as seed ortholog is 100%.

Group of orthologs #2778. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:17

F6XND0              	100.00%		H3CV99              	100.00%
Bootstrap support for F6XND0 as seed ortholog is 99%.
Bootstrap support for H3CV99 as seed ortholog is 76%.

Group of orthologs #2779. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 T.nigroviridis:185

F6ZKW1              	100.00%		H3D6H9              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for H3D6H9 as seed ortholog is 100%.

Group of orthologs #2780. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 T.nigroviridis:289

F6YWI2              	100.00%		Q4SZ64              	100.00%
Bootstrap support for F6YWI2 as seed ortholog is 100%.
Bootstrap support for Q4SZ64 as seed ortholog is 100%.

Group of orthologs #2781. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 T.nigroviridis:289

F7ASI0              	100.00%		H3DP20              	100.00%
Bootstrap support for F7ASI0 as seed ortholog is 100%.
Bootstrap support for H3DP20 as seed ortholog is 100%.

Group of orthologs #2782. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 T.nigroviridis:289

H2XJI0              	100.00%		H3DQJ9              	100.00%
Bootstrap support for H2XJI0 as seed ortholog is 100%.
Bootstrap support for H3DQJ9 as seed ortholog is 100%.

Group of orthologs #2783. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:288

F6VVP4              	100.00%		H3CX98              	100.00%
F6PS87              	33.46%		
F6VVK4              	28.67%		
F7BMK2              	13.59%		
Bootstrap support for F6VVP4 as seed ortholog is 99%.
Bootstrap support for H3CX98 as seed ortholog is 100%.

Group of orthologs #2784. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 T.nigroviridis:288

F6WQE3              	100.00%		H3BXV3              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for H3BXV3 as seed ortholog is 100%.

Group of orthologs #2785. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 T.nigroviridis:288

F6TDS0              	100.00%		H3CWA1              	100.00%
Bootstrap support for F6TDS0 as seed ortholog is 100%.
Bootstrap support for H3CWA1 as seed ortholog is 100%.

Group of orthologs #2786. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 T.nigroviridis:288

H2Y0C0              	100.00%		H3DHI5              	100.00%
Bootstrap support for H2Y0C0 as seed ortholog is 100%.
Bootstrap support for H3DHI5 as seed ortholog is 100%.

Group of orthologs #2787. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:156

F6QW33              	100.00%		H3CQR9              	100.00%
                    	       		H3CY21              	10.55%
                    	       		H3DKE4              	8.41%
Bootstrap support for F6QW33 as seed ortholog is 100%.
Bootstrap support for H3CQR9 as seed ortholog is 99%.

Group of orthologs #2788. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:193

F6PN13              	100.00%		H3DCW2              	100.00%
                    	       		H3BX95              	62.18%
Bootstrap support for F6PN13 as seed ortholog is 100%.
Bootstrap support for H3DCW2 as seed ortholog is 100%.

Group of orthologs #2789. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:287

F6PH90              	100.00%		H3CCH7              	100.00%
Bootstrap support for F6PH90 as seed ortholog is 100%.
Bootstrap support for H3CCH7 as seed ortholog is 100%.

Group of orthologs #2790. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:79

F6PPH5              	100.00%		H3CJA8              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 100%.
Bootstrap support for H3CJA8 as seed ortholog is 99%.

Group of orthologs #2791. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 T.nigroviridis:287

F6R8C3              	100.00%		H3CMT9              	100.00%
Bootstrap support for F6R8C3 as seed ortholog is 100%.
Bootstrap support for H3CMT9 as seed ortholog is 100%.

Group of orthologs #2792. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:287

F6ZD00              	100.00%		H3CLD8              	100.00%
Bootstrap support for F6ZD00 as seed ortholog is 100%.
Bootstrap support for H3CLD8 as seed ortholog is 100%.

Group of orthologs #2793. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:210

F6SPV5              	100.00%		H3DIV1              	100.00%
Bootstrap support for F6SPV5 as seed ortholog is 100%.
Bootstrap support for H3DIV1 as seed ortholog is 100%.

Group of orthologs #2794. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:287

F6YS62              	100.00%		Q4RXL8              	100.00%
Bootstrap support for F6YS62 as seed ortholog is 100%.
Bootstrap support for Q4RXL8 as seed ortholog is 100%.

Group of orthologs #2795. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 T.nigroviridis:287

H2XSI8              	100.00%		H3DNQ1              	100.00%
Bootstrap support for H2XSI8 as seed ortholog is 100%.
Bootstrap support for H3DNQ1 as seed ortholog is 100%.

Group of orthologs #2796. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 T.nigroviridis:81

F6VYS2              	100.00%		H3CMU5              	100.00%
                    	       		H3BWS2              	13.17%
Bootstrap support for F6VYS2 as seed ortholog is 100%.
Bootstrap support for H3CMU5 as seed ortholog is 91%.

Group of orthologs #2797. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 T.nigroviridis:286

F6RWY1              	100.00%		H3D829              	100.00%
Bootstrap support for F6RWY1 as seed ortholog is 100%.
Bootstrap support for H3D829 as seed ortholog is 100%.

Group of orthologs #2798. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:105

F6WB20              	100.00%		H3DLA7              	100.00%
Bootstrap support for F6WB20 as seed ortholog is 100%.
Bootstrap support for H3DLA7 as seed ortholog is 99%.

Group of orthologs #2799. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F6X6Z3              	100.00%		H3C2J7              	100.00%
                    	       		H3C364              	40.95%
                    	       		H3C1Z3              	17.40%
Bootstrap support for F6X6Z3 as seed ortholog is 100%.
Bootstrap support for H3C2J7 as seed ortholog is 100%.

Group of orthologs #2800. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:117

F6VRB9              	100.00%		H3D8F2              	100.00%
                    	       		H3CYZ0              	33.53%
                    	       		H3DNF6              	29.96%
Bootstrap support for F6VRB9 as seed ortholog is 100%.
Bootstrap support for H3D8F2 as seed ortholog is 99%.

Group of orthologs #2801. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F7ATI9              	100.00%		H3CZN3              	100.00%
                    	       		H3CEM2              	6.47%
Bootstrap support for F7ATI9 as seed ortholog is 100%.
Bootstrap support for H3CZN3 as seed ortholog is 100%.

Group of orthologs #2802. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F7ACY4              	100.00%		H3CBE6              	100.00%
Bootstrap support for F7ACY4 as seed ortholog is 100%.
Bootstrap support for H3CBE6 as seed ortholog is 100%.

Group of orthologs #2803. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F6ZQ58              	100.00%		H3CH93              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for H3CH93 as seed ortholog is 100%.

Group of orthologs #2804. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

H2XTJ5              	100.00%		H3CAE6              	100.00%
Bootstrap support for H2XTJ5 as seed ortholog is 100%.
Bootstrap support for H3CAE6 as seed ortholog is 100%.

Group of orthologs #2805. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:219

Q256Z9              	100.00%		H3BZH9              	100.00%
Bootstrap support for Q256Z9 as seed ortholog is 100%.
Bootstrap support for H3BZH9 as seed ortholog is 100%.

Group of orthologs #2806. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F7B496              	100.00%		H3DE23              	100.00%
Bootstrap support for F7B496 as seed ortholog is 100%.
Bootstrap support for H3DE23 as seed ortholog is 100%.

Group of orthologs #2807. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F7A2C9              	100.00%		H3DLA2              	100.00%
Bootstrap support for F7A2C9 as seed ortholog is 100%.
Bootstrap support for H3DLA2 as seed ortholog is 100%.

Group of orthologs #2808. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F7A5R9              	100.00%		Q4RLG4              	100.00%
Bootstrap support for F7A5R9 as seed ortholog is 100%.
Bootstrap support for Q4RLG4 as seed ortholog is 100%.

Group of orthologs #2809. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

F7BQ69              	100.00%		Q4S618              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for Q4S618 as seed ortholog is 100%.

Group of orthologs #2810. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 T.nigroviridis:285

H2XSG4              	100.00%		H3DKY0              	100.00%
Bootstrap support for H2XSG4 as seed ortholog is 100%.
Bootstrap support for H3DKY0 as seed ortholog is 100%.

Group of orthologs #2811. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:213

H2XMB6              	100.00%		Q4SV04              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 100%.
Bootstrap support for Q4SV04 as seed ortholog is 100%.

Group of orthologs #2812. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:285

H2XY27              	100.00%		Q4RTV6              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for Q4RTV6 as seed ortholog is 100%.

Group of orthologs #2813. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:72

H2XSU2              	100.00%		H3D360              	100.00%
                    	       		H3CQH6              	20.81%
Bootstrap support for H2XSU2 as seed ortholog is 100%.
Bootstrap support for H3D360 as seed ortholog is 96%.

Group of orthologs #2814. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:284

F6SYP3              	100.00%		H3CPY2              	100.00%
Bootstrap support for F6SYP3 as seed ortholog is 100%.
Bootstrap support for H3CPY2 as seed ortholog is 100%.

Group of orthologs #2815. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:284

F6YFV6              	100.00%		H3CN05              	100.00%
Bootstrap support for F6YFV6 as seed ortholog is 100%.
Bootstrap support for H3CN05 as seed ortholog is 100%.

Group of orthologs #2816. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:14

F6VY76              	100.00%		H3D1L6              	100.00%
Bootstrap support for F6VY76 as seed ortholog is 100%.
Bootstrap support for H3D1L6 as seed ortholog is 82%.

Group of orthologs #2817. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:182

F7ALJ0              	100.00%		H3DJX2              	100.00%
Bootstrap support for F7ALJ0 as seed ortholog is 99%.
Bootstrap support for H3DJX2 as seed ortholog is 100%.

Group of orthologs #2818. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:284

H2XVN4              	100.00%		H3DEF9              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for H3DEF9 as seed ortholog is 100%.

Group of orthologs #2819. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:168

H2XYX4              	100.00%		H3DD98              	100.00%
Bootstrap support for H2XYX4 as seed ortholog is 100%.
Bootstrap support for H3DD98 as seed ortholog is 99%.

Group of orthologs #2820. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 T.nigroviridis:108

Q4H3F7              	100.00%		H3D8S7              	100.00%
Bootstrap support for Q4H3F7 as seed ortholog is 100%.
Bootstrap support for H3D8S7 as seed ortholog is 99%.

Group of orthologs #2821. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:283

F6XBS5              	100.00%		H3DGA3              	100.00%
                    	       		H3D5G4              	38.49%
                    	       		H3DC78              	20.56%
Bootstrap support for F6XBS5 as seed ortholog is 78%.
Bootstrap support for H3DGA3 as seed ortholog is 100%.

Group of orthologs #2822. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:116

F6WJ31              	100.00%		H3CA39              	100.00%
                    	       		H3D8D2              	13.39%
Bootstrap support for F6WJ31 as seed ortholog is 100%.
Bootstrap support for H3CA39 as seed ortholog is 99%.

Group of orthologs #2823. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:11

Q95P33              	100.00%		H3BYA7              	100.00%
F6YTW2              	22.29%		
Bootstrap support for Q95P33 as seed ortholog is 100%.
Bootstrap support for H3BYA7 as seed ortholog is 63%.
Alternative seed ortholog is H3DQ31 (11 bits away from this cluster)

Group of orthologs #2824. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 T.nigroviridis:283

F6TLE4              	100.00%		H3CE76              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for H3CE76 as seed ortholog is 100%.

Group of orthologs #2825. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 T.nigroviridis:134

F7AXI1              	100.00%		H3CCZ2              	100.00%
Bootstrap support for F7AXI1 as seed ortholog is 100%.
Bootstrap support for H3CCZ2 as seed ortholog is 99%.

Group of orthologs #2826. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 T.nigroviridis:283

F6WSD2              	100.00%		Q4SF87              	100.00%
Bootstrap support for F6WSD2 as seed ortholog is 100%.
Bootstrap support for Q4SF87 as seed ortholog is 100%.

Group of orthologs #2827. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:282

H2XJH4              	100.00%		H3CJ14              	100.00%
                    	       		Q4SMA2              	69.23%
                    	       		H3CTJ1              	52.11%
Bootstrap support for H2XJH4 as seed ortholog is 100%.
Bootstrap support for H3CJ14 as seed ortholog is 100%.

Group of orthologs #2828. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:282

F6SFI7              	100.00%		H3CG07              	100.00%
                    	       		H3DL66              	21.48%
Bootstrap support for F6SFI7 as seed ortholog is 100%.
Bootstrap support for H3CG07 as seed ortholog is 100%.

Group of orthologs #2829. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:94

F6S1J5              	100.00%		H3CMC0              	100.00%
                    	       		H3DJP6              	14.25%
Bootstrap support for F6S1J5 as seed ortholog is 99%.
Bootstrap support for H3CMC0 as seed ortholog is 99%.

Group of orthologs #2830. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:103

F6ZUZ5              	100.00%		H3CTY8              	100.00%
                    	       		H3DK74              	42.18%
Bootstrap support for F6ZUZ5 as seed ortholog is 100%.
Bootstrap support for H3CTY8 as seed ortholog is 99%.

Group of orthologs #2831. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 T.nigroviridis:77

H2XNC3              	100.00%		H3DM29              	100.00%
                    	       		H3CA29              	15.32%
Bootstrap support for H2XNC3 as seed ortholog is 60%.
Alternative seed ortholog is F6RKK1 (14 bits away from this cluster)
Bootstrap support for H3DM29 as seed ortholog is 97%.

Group of orthologs #2832. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:282

F6YJB7              	100.00%		H3BX47              	100.00%
Bootstrap support for F6YJB7 as seed ortholog is 100%.
Bootstrap support for H3BX47 as seed ortholog is 100%.

Group of orthologs #2833. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:282

H2XQ29              	100.00%		H3BWN6              	100.00%
Bootstrap support for H2XQ29 as seed ortholog is 100%.
Bootstrap support for H3BWN6 as seed ortholog is 100%.

Group of orthologs #2834. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:282

F7AJZ2              	100.00%		H3CCH9              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for H3CCH9 as seed ortholog is 100%.

Group of orthologs #2835. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:282

F6QRX3              	100.00%		H3DH42              	100.00%
Bootstrap support for F6QRX3 as seed ortholog is 100%.
Bootstrap support for H3DH42 as seed ortholog is 100%.

Group of orthologs #2836. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:47

F6WV27              	100.00%		H3D9Y7              	100.00%
Bootstrap support for F6WV27 as seed ortholog is 100%.
Bootstrap support for H3D9Y7 as seed ortholog is 91%.

Group of orthologs #2837. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 T.nigroviridis:55

H2XQ24              	100.00%		H3DD26              	100.00%
Bootstrap support for H2XQ24 as seed ortholog is 100%.
Bootstrap support for H3DD26 as seed ortholog is 97%.

Group of orthologs #2838. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:179

H2XZJ2              	100.00%		Q4RN14              	100.00%
                    	       		H3DMS2              	77.46%
                    	       		H3DMZ5              	67.61%
Bootstrap support for H2XZJ2 as seed ortholog is 100%.
Bootstrap support for Q4RN14 as seed ortholog is 100%.

Group of orthologs #2839. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

F6PXM4              	100.00%		H3DJ69              	100.00%
                    	       		H3CWI9              	13.21%
Bootstrap support for F6PXM4 as seed ortholog is 100%.
Bootstrap support for H3DJ69 as seed ortholog is 100%.

Group of orthologs #2840. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

F6X2Y1              	100.00%		H3C630              	100.00%
Bootstrap support for F6X2Y1 as seed ortholog is 100%.
Bootstrap support for H3C630 as seed ortholog is 100%.

Group of orthologs #2841. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

F6QWW6              	100.00%		H3CYY4              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for H3CYY4 as seed ortholog is 100%.

Group of orthologs #2842. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:204

F6X139              	100.00%		H3CHF6              	100.00%
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for H3CHF6 as seed ortholog is 100%.

Group of orthologs #2843. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:164

F6YGF8              	100.00%		H3CX34              	100.00%
Bootstrap support for F6YGF8 as seed ortholog is 100%.
Bootstrap support for H3CX34 as seed ortholog is 100%.

Group of orthologs #2844. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

F6XZ31              	100.00%		H3D257              	100.00%
Bootstrap support for F6XZ31 as seed ortholog is 100%.
Bootstrap support for H3D257 as seed ortholog is 100%.

Group of orthologs #2845. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F6T4J3              	100.00%		H3DPB2              	100.00%
Bootstrap support for F6T4J3 as seed ortholog is 100%.
Bootstrap support for H3DPB2 as seed ortholog is 100%.

Group of orthologs #2846. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

F6XFZ5              	100.00%		H3DKH2              	100.00%
Bootstrap support for F6XFZ5 as seed ortholog is 100%.
Bootstrap support for H3DKH2 as seed ortholog is 100%.

Group of orthologs #2847. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

H2XM43              	100.00%		H3DB04              	100.00%
Bootstrap support for H2XM43 as seed ortholog is 100%.
Bootstrap support for H3DB04 as seed ortholog is 100%.

Group of orthologs #2848. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 T.nigroviridis:281

H2Y2A0              	100.00%		Q4S931              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for Q4S931 as seed ortholog is 100%.

Group of orthologs #2849. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6WJ25              	100.00%		Q4SV25              	100.00%
                    	       		H3CX85              	13.55%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for Q4SV25 as seed ortholog is 100%.

Group of orthologs #2850. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 T.nigroviridis:29

F6R0U8              	100.00%		H3D3Y3              	100.00%
Bootstrap support for F6R0U8 as seed ortholog is 100%.
Bootstrap support for H3D3Y3 as seed ortholog is 87%.

Group of orthologs #2851. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:9

F6QIM1              	100.00%		H3D6A1              	100.00%
Bootstrap support for F6QIM1 as seed ortholog is 100%.
Bootstrap support for H3D6A1 as seed ortholog is 67%.
Alternative seed ortholog is H3CU91 (9 bits away from this cluster)

Group of orthologs #2852. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6UMT8              	100.00%		H3CYS0              	100.00%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for H3CYS0 as seed ortholog is 100%.

Group of orthologs #2853. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6RYL0              	100.00%		H3DDL4              	100.00%
Bootstrap support for F6RYL0 as seed ortholog is 100%.
Bootstrap support for H3DDL4 as seed ortholog is 100%.

Group of orthologs #2854. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6R192              	100.00%		H3DMM9              	100.00%
Bootstrap support for F6R192 as seed ortholog is 100%.
Bootstrap support for H3DMM9 as seed ortholog is 100%.

Group of orthologs #2855. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6WTU8              	100.00%		H3D682              	100.00%
Bootstrap support for F6WTU8 as seed ortholog is 100%.
Bootstrap support for H3D682 as seed ortholog is 100%.

Group of orthologs #2856. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6W0Q4              	100.00%		H3DJV7              	100.00%
Bootstrap support for F6W0Q4 as seed ortholog is 100%.
Bootstrap support for H3DJV7 as seed ortholog is 100%.

Group of orthologs #2857. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F6Z768              	100.00%		H3D9A5              	100.00%
Bootstrap support for F6Z768 as seed ortholog is 100%.
Bootstrap support for H3D9A5 as seed ortholog is 100%.

Group of orthologs #2858. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:280

H2Y2T1              	100.00%		H3CNY4              	100.00%
Bootstrap support for H2Y2T1 as seed ortholog is 99%.
Bootstrap support for H3CNY4 as seed ortholog is 100%.

Group of orthologs #2859. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F7B2Q1              	100.00%		H3DHC6              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for H3DHC6 as seed ortholog is 100%.

Group of orthologs #2860. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:280

F7APT3              	100.00%		Q4S9I2              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for Q4S9I2 as seed ortholog is 100%.

Group of orthologs #2861. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:74

H2XTS6              	100.00%		H3DIM1              	100.00%
Bootstrap support for H2XTS6 as seed ortholog is 100%.
Bootstrap support for H3DIM1 as seed ortholog is 97%.

Group of orthologs #2862. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 T.nigroviridis:63

H2Y3J8              	100.00%		H3DHE8              	100.00%
Bootstrap support for H2Y3J8 as seed ortholog is 100%.
Bootstrap support for H3DHE8 as seed ortholog is 94%.

Group of orthologs #2863. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:96

F6Z7L3              	100.00%		H3DBY5              	100.00%
                    	       		H3D5E3              	56.32%
                    	       		H3DHG0              	47.18%
Bootstrap support for F6Z7L3 as seed ortholog is 100%.
Bootstrap support for H3DBY5 as seed ortholog is 99%.

Group of orthologs #2864. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:177

F6UEE4              	100.00%		H3DB85              	100.00%
                    	       		H3DC22              	7.01%
Bootstrap support for F6UEE4 as seed ortholog is 100%.
Bootstrap support for H3DB85 as seed ortholog is 100%.

Group of orthologs #2865. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:213

H2XQS5              	100.00%		H3CR00              	100.00%
F7ADF2              	33.90%		
Bootstrap support for H2XQS5 as seed ortholog is 100%.
Bootstrap support for H3CR00 as seed ortholog is 100%.

Group of orthologs #2866. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:204

F6Q9C5              	100.00%		H3CBU5              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 100%.
Bootstrap support for H3CBU5 as seed ortholog is 100%.

Group of orthologs #2867. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:279

F6UVY6              	100.00%		H3C462              	100.00%
Bootstrap support for F6UVY6 as seed ortholog is 100%.
Bootstrap support for H3C462 as seed ortholog is 100%.

Group of orthologs #2868. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:279

F6PIG9              	100.00%		H3CUV5              	100.00%
Bootstrap support for F6PIG9 as seed ortholog is 100%.
Bootstrap support for H3CUV5 as seed ortholog is 100%.

Group of orthologs #2869. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:182

F6XWG9              	100.00%		H3CBF6              	100.00%
Bootstrap support for F6XWG9 as seed ortholog is 100%.
Bootstrap support for H3CBF6 as seed ortholog is 100%.

Group of orthologs #2870. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:279

F6RU88              	100.00%		H3D122              	100.00%
Bootstrap support for F6RU88 as seed ortholog is 100%.
Bootstrap support for H3D122 as seed ortholog is 100%.

Group of orthologs #2871. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 T.nigroviridis:279

F6QX49              	100.00%		Q4S7S5              	100.00%
Bootstrap support for F6QX49 as seed ortholog is 86%.
Bootstrap support for Q4S7S5 as seed ortholog is 100%.

Group of orthologs #2872. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:137

H2XLK7              	100.00%		H3CQN8              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 100%.
Bootstrap support for H3CQN8 as seed ortholog is 100%.

Group of orthologs #2873. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 T.nigroviridis:279

Q8I7E3              	100.00%		H3CNR3              	100.00%
Bootstrap support for Q8I7E3 as seed ortholog is 100%.
Bootstrap support for H3CNR3 as seed ortholog is 100%.

Group of orthologs #2874. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 T.nigroviridis:108

F6Y5B7              	100.00%		H3CII4              	100.00%
Bootstrap support for F6Y5B7 as seed ortholog is 94%.
Bootstrap support for H3CII4 as seed ortholog is 100%.

Group of orthologs #2875. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 T.nigroviridis:278

F6SXF0              	100.00%		H3D645              	100.00%
Bootstrap support for F6SXF0 as seed ortholog is 100%.
Bootstrap support for H3D645 as seed ortholog is 100%.

Group of orthologs #2876. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 T.nigroviridis:278

H2XWR8              	100.00%		H3CF87              	100.00%
Bootstrap support for H2XWR8 as seed ortholog is 100%.
Bootstrap support for H3CF87 as seed ortholog is 100%.

Group of orthologs #2877. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:221

Q8T888              	100.00%		H3CI66              	100.00%
Bootstrap support for Q8T888 as seed ortholog is 100%.
Bootstrap support for H3CI66 as seed ortholog is 100%.

Group of orthologs #2878. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

F6PPI4              	100.00%		H3CK52              	100.00%
                    	       		H3D3I5              	100.00%
Bootstrap support for F6PPI4 as seed ortholog is 100%.
Bootstrap support for H3CK52 as seed ortholog is 100%.
Bootstrap support for H3D3I5 as seed ortholog is 100%.

Group of orthologs #2879. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:131

F6UXM4              	100.00%		H3CDW2              	100.00%
                    	       		H3CND3              	8.64%
Bootstrap support for F6UXM4 as seed ortholog is 99%.
Bootstrap support for H3CDW2 as seed ortholog is 100%.

Group of orthologs #2880. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:175

F6S968              	100.00%		H3D4A5              	100.00%
                    	       		H3CU16              	11.96%
Bootstrap support for F6S968 as seed ortholog is 99%.
Bootstrap support for H3D4A5 as seed ortholog is 100%.

Group of orthologs #2881. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

F6Z8I7              	100.00%		H3D8P5              	100.00%
                    	       		H3D5D8              	45.45%
Bootstrap support for F6Z8I7 as seed ortholog is 100%.
Bootstrap support for H3D8P5 as seed ortholog is 100%.

Group of orthologs #2882. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:170

H2XN11              	100.00%		H3D5R4              	100.00%
                    	       		H3D5R5              	34.46%
Bootstrap support for H2XN11 as seed ortholog is 100%.
Bootstrap support for H3D5R4 as seed ortholog is 100%.

Group of orthologs #2883. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:45

F6X2D7              	100.00%		Q4SHT5              	100.00%
                    	       		H3BXA1              	18.63%
Bootstrap support for F6X2D7 as seed ortholog is 100%.
Bootstrap support for Q4SHT5 as seed ortholog is 85%.

Group of orthologs #2884. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:84

F6QH89              	100.00%		H3CHC2              	100.00%
Bootstrap support for F6QH89 as seed ortholog is 99%.
Bootstrap support for H3CHC2 as seed ortholog is 97%.

Group of orthologs #2885. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

F6UUL4              	100.00%		H3C5E0              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for H3C5E0 as seed ortholog is 100%.

Group of orthologs #2886. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

F6YYU4              	100.00%		H3CGI5              	100.00%
Bootstrap support for F6YYU4 as seed ortholog is 100%.
Bootstrap support for H3CGI5 as seed ortholog is 100%.

Group of orthologs #2887. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:85

F6S146              	100.00%		H3DGZ2              	100.00%
Bootstrap support for F6S146 as seed ortholog is 99%.
Bootstrap support for H3DGZ2 as seed ortholog is 97%.

Group of orthologs #2888. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

H2XST8              	100.00%		H3C7X6              	100.00%
Bootstrap support for H2XST8 as seed ortholog is 100%.
Bootstrap support for H3C7X6 as seed ortholog is 100%.

Group of orthologs #2889. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

F6ZIA7              	100.00%		H3D260              	100.00%
Bootstrap support for F6ZIA7 as seed ortholog is 100%.
Bootstrap support for H3D260 as seed ortholog is 100%.

Group of orthologs #2890. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:277

F6XT34              	100.00%		H3D926              	100.00%
Bootstrap support for F6XT34 as seed ortholog is 100%.
Bootstrap support for H3D926 as seed ortholog is 100%.

Group of orthologs #2891. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:16

F7BKD9              	100.00%		H3D0J3              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for H3D0J3 as seed ortholog is 69%.
Alternative seed ortholog is H3CJB7 (16 bits away from this cluster)

Group of orthologs #2892. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:215

F6YLC1              	100.00%		H3DCA4              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 100%.
Bootstrap support for H3DCA4 as seed ortholog is 100%.

Group of orthologs #2893. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:179

F6X9K2              	100.00%		H3DKR6              	100.00%
Bootstrap support for F6X9K2 as seed ortholog is 100%.
Bootstrap support for H3DKR6 as seed ortholog is 100%.

Group of orthologs #2894. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:154

F6XXY5              	100.00%		Q4RMS0              	100.00%
Bootstrap support for F6XXY5 as seed ortholog is 100%.
Bootstrap support for Q4RMS0 as seed ortholog is 100%.

Group of orthologs #2895. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 T.nigroviridis:102

F7A771              	100.00%		Q4S823              	100.00%
Bootstrap support for F7A771 as seed ortholog is 100%.
Bootstrap support for Q4S823 as seed ortholog is 99%.

Group of orthologs #2896. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:163

H2XXH6              	100.00%		Q4SQ77              	100.00%
Bootstrap support for H2XXH6 as seed ortholog is 100%.
Bootstrap support for Q4SQ77 as seed ortholog is 100%.

Group of orthologs #2897. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:276

F6ZNK2              	100.00%		H3DJE8              	100.00%
                    	       		H3DAU6              	14.24%
Bootstrap support for F6ZNK2 as seed ortholog is 98%.
Bootstrap support for H3DJE8 as seed ortholog is 100%.

Group of orthologs #2898. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:276

F6QLG8              	100.00%		H3CI48              	100.00%
Bootstrap support for F6QLG8 as seed ortholog is 100%.
Bootstrap support for H3CI48 as seed ortholog is 100%.

Group of orthologs #2899. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:276

F6RZU6              	100.00%		H3CL91              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for H3CL91 as seed ortholog is 100%.

Group of orthologs #2900. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:276

F6Y0Q5              	100.00%		H3CEJ0              	100.00%
Bootstrap support for F6Y0Q5 as seed ortholog is 100%.
Bootstrap support for H3CEJ0 as seed ortholog is 100%.

Group of orthologs #2901. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:133

F6ZX46              	100.00%		H3CMD0              	100.00%
Bootstrap support for F6ZX46 as seed ortholog is 100%.
Bootstrap support for H3CMD0 as seed ortholog is 100%.

Group of orthologs #2902. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:276

H2XNN8              	100.00%		H3CEC2              	100.00%
Bootstrap support for H2XNN8 as seed ortholog is 100%.
Bootstrap support for H3CEC2 as seed ortholog is 100%.

Group of orthologs #2903. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:159

H2XNS7              	100.00%		H3CQD6              	100.00%
Bootstrap support for H2XNS7 as seed ortholog is 99%.
Bootstrap support for H3CQD6 as seed ortholog is 100%.

Group of orthologs #2904. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 T.nigroviridis:276

H2XW41              	100.00%		H3CY47              	100.00%
Bootstrap support for H2XW41 as seed ortholog is 100%.
Bootstrap support for H3CY47 as seed ortholog is 100%.

Group of orthologs #2905. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 T.nigroviridis:275

Q4H3H4              	100.00%		H3CE64              	100.00%
                    	       		H3CS52              	32.98%
                    	       		H3DN95              	13.24%
                    	       		H3C3K1              	12.39%
Bootstrap support for Q4H3H4 as seed ortholog is 89%.
Bootstrap support for H3CE64 as seed ortholog is 100%.

Group of orthologs #2906. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:72

H2XR17              	100.00%		H3CZ84              	100.00%
                    	       		H3DE81              	48.53%
                    	       		H3CQE9              	19.61%
Bootstrap support for H2XR17 as seed ortholog is 98%.
Bootstrap support for H3CZ84 as seed ortholog is 98%.

Group of orthologs #2907. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:275

F6WWW9              	100.00%		H3CI59              	100.00%
                    	       		H3CA96              	23.69%
Bootstrap support for F6WWW9 as seed ortholog is 100%.
Bootstrap support for H3CI59 as seed ortholog is 100%.

Group of orthologs #2908. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:193

F6RUS9              	100.00%		H3DJ67              	100.00%
F6Q3M5              	9.75%		
Bootstrap support for F6RUS9 as seed ortholog is 100%.
Bootstrap support for H3DJ67 as seed ortholog is 100%.

Group of orthologs #2909. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:72

H2Y115              	100.00%		H3DJY3              	100.00%
                    	       		H3CQN6              	17.43%
Bootstrap support for H2Y115 as seed ortholog is 99%.
Bootstrap support for H3DJY3 as seed ortholog is 99%.

Group of orthologs #2910. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:275

H2XU57              	100.00%		Q4T9W7              	100.00%
Q8I7D6              	92.31%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for Q4T9W7 as seed ortholog is 100%.

Group of orthologs #2911. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:275

F6QDJ6              	100.00%		H3CKL4              	100.00%
Bootstrap support for F6QDJ6 as seed ortholog is 100%.
Bootstrap support for H3CKL4 as seed ortholog is 100%.

Group of orthologs #2912. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:275

H2XTN0              	100.00%		H3BXR2              	100.00%
Bootstrap support for H2XTN0 as seed ortholog is 100%.
Bootstrap support for H3BXR2 as seed ortholog is 100%.

Group of orthologs #2913. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:275

F6UA65              	100.00%		Q4SM54              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for Q4SM54 as seed ortholog is 100%.

Group of orthologs #2914. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 T.nigroviridis:53

F7ASL8              	100.00%		Q4S2G5              	100.00%
Bootstrap support for F7ASL8 as seed ortholog is 71%.
Alternative seed ortholog is F6QRC2 (11 bits away from this cluster)
Bootstrap support for Q4S2G5 as seed ortholog is 99%.

Group of orthologs #2915. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 T.nigroviridis:275

H2XPJ6              	100.00%		Q4S4I5              	100.00%
Bootstrap support for H2XPJ6 as seed ortholog is 100%.
Bootstrap support for Q4S4I5 as seed ortholog is 100%.

Group of orthologs #2916. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

F6X5U2              	100.00%		H3DMU9              	100.00%
                    	       		H3CD43              	19.91%
Bootstrap support for F6X5U2 as seed ortholog is 100%.
Bootstrap support for H3DMU9 as seed ortholog is 100%.

Group of orthologs #2917. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

F6ZM98              	100.00%		H3DH35              	100.00%
                    	       		H3DCW9              	11.04%
Bootstrap support for F6ZM98 as seed ortholog is 100%.
Bootstrap support for H3DH35 as seed ortholog is 100%.

Group of orthologs #2918. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

F6ZCI6              	100.00%		H3CMZ8              	100.00%
Bootstrap support for F6ZCI6 as seed ortholog is 100%.
Bootstrap support for H3CMZ8 as seed ortholog is 100%.

Group of orthologs #2919. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

H2XW62              	100.00%		H3CAK2              	100.00%
Bootstrap support for H2XW62 as seed ortholog is 100%.
Bootstrap support for H3CAK2 as seed ortholog is 100%.

Group of orthologs #2920. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

F6ZCF4              	100.00%		H3DE50              	100.00%
Bootstrap support for F6ZCF4 as seed ortholog is 100%.
Bootstrap support for H3DE50 as seed ortholog is 100%.

Group of orthologs #2921. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

F6YYA5              	100.00%		H3DI55              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for H3DI55 as seed ortholog is 100%.

Group of orthologs #2922. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

Q4H3P5              	100.00%		H3CMM2              	100.00%
Bootstrap support for Q4H3P5 as seed ortholog is 100%.
Bootstrap support for H3CMM2 as seed ortholog is 100%.

Group of orthologs #2923. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:201

F7AFF3              	100.00%		Q4RIR8              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for Q4RIR8 as seed ortholog is 100%.

Group of orthologs #2924. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 T.nigroviridis:274

H2Y279              	100.00%		H3D6T9              	100.00%
Bootstrap support for H2Y279 as seed ortholog is 64%.
Alternative seed ortholog is F6SGU7 (13 bits away from this cluster)
Bootstrap support for H3D6T9 as seed ortholog is 100%.

Group of orthologs #2925. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 T.nigroviridis:274

H2XWW0              	100.00%		H3DFC7              	100.00%
Bootstrap support for H2XWW0 as seed ortholog is 100%.
Bootstrap support for H3DFC7 as seed ortholog is 100%.

Group of orthologs #2926. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 T.nigroviridis:65

F6T1L5              	100.00%		H3D3N3              	100.00%
F6ZUI8              	62.22%		H3CFZ4              	20.47%
H2XYR8              	7.07%		
H2XW85              	6.72%		
Bootstrap support for F6T1L5 as seed ortholog is 55%.
Alternative seed ortholog is F6UTN2 (5 bits away from this cluster)
Bootstrap support for H3D3N3 as seed ortholog is 89%.

Group of orthologs #2927. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:273

F7AR28              	100.00%		H3DIJ5              	100.00%
                    	       		H3CZC7              	55.77%
                    	       		H3DDA6              	22.38%
Bootstrap support for F7AR28 as seed ortholog is 100%.
Bootstrap support for H3DIJ5 as seed ortholog is 100%.

Group of orthologs #2928. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:164

F6XP52              	100.00%		H3CEF0              	100.00%
                    	       		H3D939              	9.62%
Bootstrap support for F6XP52 as seed ortholog is 100%.
Bootstrap support for H3CEF0 as seed ortholog is 99%.

Group of orthologs #2929. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:217

F7A9X0              	100.00%		H3DA63              	100.00%
                    	       		H3CKX3              	30.38%
Bootstrap support for F7A9X0 as seed ortholog is 100%.
Bootstrap support for H3DA63 as seed ortholog is 100%.

Group of orthologs #2930. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:273

F6WGY1              	100.00%		H3CIK9              	100.00%
Bootstrap support for F6WGY1 as seed ortholog is 100%.
Bootstrap support for H3CIK9 as seed ortholog is 100%.

Group of orthologs #2931. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:273

F6YDH8              	100.00%		H3CCF7              	100.00%
Bootstrap support for F6YDH8 as seed ortholog is 100%.
Bootstrap support for H3CCF7 as seed ortholog is 100%.

Group of orthologs #2932. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:177

F6UFA9              	100.00%		H3CU74              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for H3CU74 as seed ortholog is 100%.

Group of orthologs #2933. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 T.nigroviridis:93

F7AMQ9              	100.00%		H3D6Z7              	100.00%
Bootstrap support for F7AMQ9 as seed ortholog is 69%.
Alternative seed ortholog is F6XJ57 (14 bits away from this cluster)
Bootstrap support for H3D6Z7 as seed ortholog is 99%.

Group of orthologs #2934. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:273

F6Y043              	100.00%		H3DJY4              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 100%.
Bootstrap support for H3DJY4 as seed ortholog is 100%.

Group of orthologs #2935. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:201

H2XXX4              	100.00%		H3DBZ0              	100.00%
Bootstrap support for H2XXX4 as seed ortholog is 100%.
Bootstrap support for H3DBZ0 as seed ortholog is 100%.

Group of orthologs #2936. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:218

H2XSU1              	100.00%		H3DJY7              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for H3DJY7 as seed ortholog is 100%.

Group of orthologs #2937. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 T.nigroviridis:135

H2XYW2              	100.00%		H3DJ32              	100.00%
Bootstrap support for H2XYW2 as seed ortholog is 100%.
Bootstrap support for H3DJ32 as seed ortholog is 99%.

Group of orthologs #2938. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:91

H2XJR2              	100.00%		Q4SMW0              	100.00%
                    	       		H3DB77              	19.09%
                    	       		H3DAW7              	17.18%
Bootstrap support for H2XJR2 as seed ortholog is 100%.
Bootstrap support for Q4SMW0 as seed ortholog is 99%.

Group of orthologs #2939. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:272

F6R2P7              	100.00%		H3CGN4              	100.00%
                    	       		H3D1I1              	30.11%
Bootstrap support for F6R2P7 as seed ortholog is 98%.
Bootstrap support for H3CGN4 as seed ortholog is 100%.

Group of orthologs #2940. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 T.nigroviridis:183

F6TSI9              	100.00%		H3DA27              	100.00%
                    	       		H3CCZ7              	22.24%
Bootstrap support for F6TSI9 as seed ortholog is 100%.
Bootstrap support for H3DA27 as seed ortholog is 100%.

Group of orthologs #2941. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:104

F7ATJ8              	100.00%		H3CUA4              	100.00%
                    	       		H3D6S2              	26.20%
Bootstrap support for F7ATJ8 as seed ortholog is 100%.
Bootstrap support for H3CUA4 as seed ortholog is 99%.

Group of orthologs #2942. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:163

H2XRU5              	100.00%		H3DF91              	100.00%
                    	       		H3DE92              	35.71%
Bootstrap support for H2XRU5 as seed ortholog is 100%.
Bootstrap support for H3DF91 as seed ortholog is 100%.

Group of orthologs #2943. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:170

C4B8X5              	100.00%		H3C5E1              	100.00%
Bootstrap support for C4B8X5 as seed ortholog is 100%.
Bootstrap support for H3C5E1 as seed ortholog is 100%.

Group of orthologs #2944. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 T.nigroviridis:272

F6UMK9              	100.00%		H3CCG7              	100.00%
Bootstrap support for F6UMK9 as seed ortholog is 100%.
Bootstrap support for H3CCG7 as seed ortholog is 100%.

Group of orthologs #2945. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 T.nigroviridis:272

F6WJQ0              	100.00%		H3CC96              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for H3CC96 as seed ortholog is 100%.

Group of orthologs #2946. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:181

F6WJS0              	100.00%		H3CR45              	100.00%
Bootstrap support for F6WJS0 as seed ortholog is 100%.
Bootstrap support for H3CR45 as seed ortholog is 100%.

Group of orthologs #2947. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:272

F6Y8Y8              	100.00%		H3CQL5              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for H3CQL5 as seed ortholog is 100%.

Group of orthologs #2948. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:26

F6UAF0              	100.00%		H3D7R6              	100.00%
Bootstrap support for F6UAF0 as seed ortholog is 100%.
Bootstrap support for H3D7R6 as seed ortholog is 91%.

Group of orthologs #2949. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 T.nigroviridis:272

F6SKS5              	100.00%		Q4SRX8              	100.00%
Bootstrap support for F6SKS5 as seed ortholog is 100%.
Bootstrap support for Q4SRX8 as seed ortholog is 100%.

Group of orthologs #2950. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 T.nigroviridis:156

H2XPF4              	100.00%		H3D3K2              	100.00%
Bootstrap support for H2XPF4 as seed ortholog is 100%.
Bootstrap support for H3D3K2 as seed ortholog is 100%.

Group of orthologs #2951. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 T.nigroviridis:272

H2XV63              	100.00%		H3D2N7              	100.00%
Bootstrap support for H2XV63 as seed ortholog is 100%.
Bootstrap support for H3D2N7 as seed ortholog is 100%.

Group of orthologs #2952. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:105

H2XSB5              	100.00%		H3CP69              	100.00%
                    	       		H3DF76              	22.49%
Bootstrap support for H2XSB5 as seed ortholog is 100%.
Bootstrap support for H3CP69 as seed ortholog is 99%.

Group of orthologs #2953. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:271

F6W3C3              	100.00%		H3C503              	100.00%
Bootstrap support for F6W3C3 as seed ortholog is 100%.
Bootstrap support for H3C503 as seed ortholog is 100%.

Group of orthologs #2954. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:210

F6T9R1              	100.00%		H3CQ87              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for H3CQ87 as seed ortholog is 100%.

Group of orthologs #2955. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:138

F6TXZ0              	100.00%		H3CRX9              	100.00%
Bootstrap support for F6TXZ0 as seed ortholog is 99%.
Bootstrap support for H3CRX9 as seed ortholog is 98%.

Group of orthologs #2956. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:144

F6TCR0              	100.00%		H3D5R6              	100.00%
Bootstrap support for F6TCR0 as seed ortholog is 99%.
Bootstrap support for H3D5R6 as seed ortholog is 99%.

Group of orthologs #2957. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 T.nigroviridis:209

F6SU61              	100.00%		H3DA33              	100.00%
Bootstrap support for F6SU61 as seed ortholog is 100%.
Bootstrap support for H3DA33 as seed ortholog is 100%.

Group of orthologs #2958. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:188

H2XWC1              	100.00%		H3BVV1              	100.00%
Bootstrap support for H2XWC1 as seed ortholog is 100%.
Bootstrap support for H3BVV1 as seed ortholog is 100%.

Group of orthologs #2959. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:271

F6WSV9              	100.00%		H3D4H1              	100.00%
Bootstrap support for F6WSV9 as seed ortholog is 100%.
Bootstrap support for H3D4H1 as seed ortholog is 100%.

Group of orthologs #2960. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:271

H2XNJ5              	100.00%		H3CFM7              	100.00%
Bootstrap support for H2XNJ5 as seed ortholog is 100%.
Bootstrap support for H3CFM7 as seed ortholog is 100%.

Group of orthologs #2961. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 T.nigroviridis:271

H2XS95              	100.00%		H3D0W9              	100.00%
Bootstrap support for H2XS95 as seed ortholog is 100%.
Bootstrap support for H3D0W9 as seed ortholog is 100%.

Group of orthologs #2962. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

Q1RLF9              	100.00%		H3CBQ5              	100.00%
                    	       		H3CZE9              	27.89%
                    	       		H3CSV7              	22.80%
Bootstrap support for Q1RLF9 as seed ortholog is 100%.
Bootstrap support for H3CBQ5 as seed ortholog is 100%.

Group of orthologs #2963. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

F6WKL0              	100.00%		H3BX40              	100.00%
                    	       		H3CNG6              	6.53%
Bootstrap support for F6WKL0 as seed ortholog is 100%.
Bootstrap support for H3BX40 as seed ortholog is 100%.

Group of orthologs #2964. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:37

F6QXH6              	100.00%		Q4SXN5              	100.00%
                    	       		Q4S3H3              	5.41%
Bootstrap support for F6QXH6 as seed ortholog is 100%.
Bootstrap support for Q4SXN5 as seed ortholog is 96%.

Group of orthologs #2965. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:227

F6RGX1              	100.00%		H3CA60              	100.00%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for H3CA60 as seed ortholog is 100%.

Group of orthologs #2966. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

F7APS6              	100.00%		H3C8E9              	100.00%
Bootstrap support for F7APS6 as seed ortholog is 100%.
Bootstrap support for H3C8E9 as seed ortholog is 100%.

Group of orthologs #2967. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

F6XNX8              	100.00%		H3CPX7              	100.00%
Bootstrap support for F6XNX8 as seed ortholog is 100%.
Bootstrap support for H3CPX7 as seed ortholog is 100%.

Group of orthologs #2968. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

H2XWQ0              	100.00%		H3CDN9              	100.00%
Bootstrap support for H2XWQ0 as seed ortholog is 100%.
Bootstrap support for H3CDN9 as seed ortholog is 100%.

Group of orthologs #2969. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:149

F6WJD2              	100.00%		H3DKD7              	100.00%
Bootstrap support for F6WJD2 as seed ortholog is 99%.
Bootstrap support for H3DKD7 as seed ortholog is 100%.

Group of orthologs #2970. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

F6TRZ2              	100.00%		Q4SIB7              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for Q4SIB7 as seed ortholog is 100%.

Group of orthologs #2971. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:270

F7BBQ0              	100.00%		H3D924              	100.00%
Bootstrap support for F7BBQ0 as seed ortholog is 100%.
Bootstrap support for H3D924 as seed ortholog is 100%.

Group of orthologs #2972. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 T.nigroviridis:147

H2XPL3              	100.00%		H3D7W1              	100.00%
Bootstrap support for H2XPL3 as seed ortholog is 100%.
Bootstrap support for H3D7W1 as seed ortholog is 99%.

Group of orthologs #2973. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:120

F6YJ36              	100.00%		H3C6V3              	100.00%
                    	       		H3DM90              	20.96%
                    	       		H3C0W0              	17.01%
                    	       		H3DNB6              	8.66%
Bootstrap support for F6YJ36 as seed ortholog is 78%.
Bootstrap support for H3C6V3 as seed ortholog is 99%.

Group of orthologs #2974. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:145

F6S8K9              	100.00%		H3CTS4              	100.00%
                    	       		Q4RZE5              	18.33%
Bootstrap support for F6S8K9 as seed ortholog is 100%.
Bootstrap support for H3CTS4 as seed ortholog is 99%.

Group of orthologs #2975. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:31

H2XZR6              	100.00%		H3CXN8              	100.00%
P91580              	100.00%		
Bootstrap support for H2XZR6 as seed ortholog is 100%.
Bootstrap support for P91580 as seed ortholog is 100%.
Bootstrap support for H3CXN8 as seed ortholog is 89%.

Group of orthologs #2976. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:161

H2XNN6              	100.00%		H3DFF5              	100.00%
                    	       		H3DFN0              	26.67%
Bootstrap support for H2XNN6 as seed ortholog is 100%.
Bootstrap support for H3DFF5 as seed ortholog is 100%.

Group of orthologs #2977. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:269

F6S8Y1              	100.00%		H3CUS5              	100.00%
Bootstrap support for F6S8Y1 as seed ortholog is 100%.
Bootstrap support for H3CUS5 as seed ortholog is 100%.

Group of orthologs #2978. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

F6R180              	100.00%		H3CZM3              	100.00%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for H3CZM3 as seed ortholog is 100%.

Group of orthologs #2979. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

F6ZU45              	100.00%		H3C6Z0              	100.00%
Bootstrap support for F6ZU45 as seed ortholog is 100%.
Bootstrap support for H3C6Z0 as seed ortholog is 100%.

Group of orthologs #2980. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

F6VKC0              	100.00%		H3CNX0              	100.00%
Bootstrap support for F6VKC0 as seed ortholog is 100%.
Bootstrap support for H3CNX0 as seed ortholog is 100%.

Group of orthologs #2981. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:269

F6X0R0              	100.00%		H3CMJ1              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 100%.
Bootstrap support for H3CMJ1 as seed ortholog is 100%.

Group of orthologs #2982. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

F6YAD0              	100.00%		H3CXA1              	100.00%
Bootstrap support for F6YAD0 as seed ortholog is 100%.
Bootstrap support for H3CXA1 as seed ortholog is 100%.

Group of orthologs #2983. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

H2XX27              	100.00%		H3C271              	100.00%
Bootstrap support for H2XX27 as seed ortholog is 100%.
Bootstrap support for H3C271 as seed ortholog is 100%.

Group of orthologs #2984. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

F6ZSN0              	100.00%		H3D1N4              	100.00%
Bootstrap support for F6ZSN0 as seed ortholog is 100%.
Bootstrap support for H3D1N4 as seed ortholog is 100%.

Group of orthologs #2985. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 T.nigroviridis:269

F7BJ17              	100.00%		H3CWG5              	100.00%
Bootstrap support for F7BJ17 as seed ortholog is 100%.
Bootstrap support for H3CWG5 as seed ortholog is 100%.

Group of orthologs #2986. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

F6SVN8              	100.00%		H3DIX2              	100.00%
                    	       		H3DP75              	24.08%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for H3DIX2 as seed ortholog is 100%.

Group of orthologs #2987. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

L7N0S6              	100.00%		H3D1B9              	100.00%
F6X0N8              	69.70%		
Bootstrap support for L7N0S6 as seed ortholog is 100%.
Bootstrap support for H3D1B9 as seed ortholog is 100%.

Group of orthologs #2988. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

F6UG73              	100.00%		H3D6E3              	100.00%
Bootstrap support for F6UG73 as seed ortholog is 100%.
Bootstrap support for H3D6E3 as seed ortholog is 100%.

Group of orthologs #2989. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

F6UUV5              	100.00%		H3DCM8              	100.00%
Bootstrap support for F6UUV5 as seed ortholog is 100%.
Bootstrap support for H3DCM8 as seed ortholog is 100%.

Group of orthologs #2990. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

F6ZBF1              	100.00%		H3DPM8              	100.00%
Bootstrap support for F6ZBF1 as seed ortholog is 100%.
Bootstrap support for H3DPM8 as seed ortholog is 100%.

Group of orthologs #2991. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

F7AWV5              	100.00%		Q4RHA7              	100.00%
Bootstrap support for F7AWV5 as seed ortholog is 100%.
Bootstrap support for Q4RHA7 as seed ortholog is 100%.

Group of orthologs #2992. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 T.nigroviridis:268

Q8HIN3              	100.00%		Q4JQI1              	100.00%
Bootstrap support for Q8HIN3 as seed ortholog is 100%.
Bootstrap support for Q4JQI1 as seed ortholog is 100%.

Group of orthologs #2993. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:267

F6ZNE7              	100.00%		H3CWD6              	100.00%
                    	       		H3DDZ2              	23.61%
Bootstrap support for F6ZNE7 as seed ortholog is 100%.
Bootstrap support for H3CWD6 as seed ortholog is 100%.

Group of orthologs #2994. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:166

H2XJL6              	100.00%		H3D8K6              	100.00%
                    	       		H3C2M5              	70.74%
Bootstrap support for H2XJL6 as seed ortholog is 100%.
Bootstrap support for H3D8K6 as seed ortholog is 100%.

Group of orthologs #2995. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:205

H2XPN7              	100.00%		H3D2C6              	100.00%
                    	       		H3DGF5              	17.17%
Bootstrap support for H2XPN7 as seed ortholog is 100%.
Bootstrap support for H3D2C6 as seed ortholog is 100%.

Group of orthologs #2996. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:67

F7BLL2              	100.00%		H3DI49              	100.00%
                    	       		Q4RG75              	19.38%
Bootstrap support for F7BLL2 as seed ortholog is 99%.
Bootstrap support for H3DI49 as seed ortholog is 97%.

Group of orthologs #2997. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:267

H2XV91              	100.00%		H3DGL2              	100.00%
F7A726              	9.46%		
Bootstrap support for H2XV91 as seed ortholog is 100%.
Bootstrap support for H3DGL2 as seed ortholog is 100%.

Group of orthologs #2998. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:267

F6TAD8              	100.00%		H3CE75              	100.00%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for H3CE75 as seed ortholog is 100%.

Group of orthologs #2999. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:267

F6TKH9              	100.00%		H3CSX5              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 100%.
Bootstrap support for H3CSX5 as seed ortholog is 100%.

Group of orthologs #3000. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:191

F6X1A2              	100.00%		H3CWH1              	100.00%
Bootstrap support for F6X1A2 as seed ortholog is 100%.
Bootstrap support for H3CWH1 as seed ortholog is 100%.

Group of orthologs #3001. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:267

F6TST6              	100.00%		H3DJP1              	100.00%
Bootstrap support for F6TST6 as seed ortholog is 100%.
Bootstrap support for H3DJP1 as seed ortholog is 100%.

Group of orthologs #3002. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 T.nigroviridis:267

H2XLQ6              	100.00%		H3CST7              	100.00%
Bootstrap support for H2XLQ6 as seed ortholog is 100%.
Bootstrap support for H3CST7 as seed ortholog is 100%.

Group of orthologs #3003. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 T.nigroviridis:188

H2XPF3              	100.00%		H3CT46              	100.00%
Bootstrap support for H2XPF3 as seed ortholog is 83%.
Bootstrap support for H3CT46 as seed ortholog is 100%.

Group of orthologs #3004. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:266

F6Z8E9              	100.00%		H3D6V6              	100.00%
                    	       		H3DIJ9              	39.24%
                    	       		H3C4L5              	35.11%
Bootstrap support for F6Z8E9 as seed ortholog is 100%.
Bootstrap support for H3D6V6 as seed ortholog is 100%.

Group of orthologs #3005. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:266

F6Q548              	100.00%		H3C8T4              	100.00%
                    	       		H3CK96              	53.83%
Bootstrap support for F6Q548 as seed ortholog is 100%.
Bootstrap support for H3C8T4 as seed ortholog is 100%.

Group of orthologs #3006. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:65

F7B4P8              	100.00%		H3CD74              	100.00%
                    	       		Q4RGI4              	12.96%
Bootstrap support for F7B4P8 as seed ortholog is 100%.
Bootstrap support for H3CD74 as seed ortholog is 99%.

Group of orthologs #3007. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:266

F6U8Q9              	100.00%		H3DIV4              	100.00%
                    	       		H3CW63              	28.71%
Bootstrap support for F6U8Q9 as seed ortholog is 100%.
Bootstrap support for H3DIV4 as seed ortholog is 100%.

Group of orthologs #3008. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:266

F6XML9              	100.00%		H3D4Q5              	100.00%
Bootstrap support for F6XML9 as seed ortholog is 100%.
Bootstrap support for H3D4Q5 as seed ortholog is 100%.

Group of orthologs #3009. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:175

F6TR45              	100.00%		H3DIP2              	100.00%
Bootstrap support for F6TR45 as seed ortholog is 100%.
Bootstrap support for H3DIP2 as seed ortholog is 99%.

Group of orthologs #3010. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:266

F7BKG7              	100.00%		H3D565              	100.00%
Bootstrap support for F7BKG7 as seed ortholog is 100%.
Bootstrap support for H3D565 as seed ortholog is 100%.

Group of orthologs #3011. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 T.nigroviridis:39

F7B4V3              	100.00%		Q4SYL0              	100.00%
Bootstrap support for F7B4V3 as seed ortholog is 100%.
Bootstrap support for Q4SYL0 as seed ortholog is 92%.

Group of orthologs #3012. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

F6Y9G2              	100.00%		H3D7D4              	100.00%
                    	       		H3C2I4              	31.34%
                    	       		H3CQM2              	24.56%
                    	       		H3D2F5              	16.79%
Bootstrap support for F6Y9G2 as seed ortholog is 100%.
Bootstrap support for H3D7D4 as seed ortholog is 100%.

Group of orthologs #3013. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:265

F7BP82              	100.00%		H3CYB7              	100.00%
F7A686              	17.45%		
Bootstrap support for F7BP82 as seed ortholog is 99%.
Bootstrap support for H3CYB7 as seed ortholog is 100%.

Group of orthologs #3014. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

F6QM57              	100.00%		H3C9S1              	100.00%
Bootstrap support for F6QM57 as seed ortholog is 100%.
Bootstrap support for H3C9S1 as seed ortholog is 100%.

Group of orthologs #3015. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

F6U1E2              	100.00%		H3CLM1              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 100%.
Bootstrap support for H3CLM1 as seed ortholog is 100%.

Group of orthologs #3016. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

F7B0X0              	100.00%		H3C6D1              	100.00%
Bootstrap support for F7B0X0 as seed ortholog is 100%.
Bootstrap support for H3C6D1 as seed ortholog is 100%.

Group of orthologs #3017. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

F6S7J0              	100.00%		H3DDG4              	100.00%
Bootstrap support for F6S7J0 as seed ortholog is 100%.
Bootstrap support for H3DDG4 as seed ortholog is 100%.

Group of orthologs #3018. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:265

F6X593              	100.00%		H3D762              	100.00%
Bootstrap support for F6X593 as seed ortholog is 70%.
Alternative seed ortholog is F6QAL4 (3 bits away from this cluster)
Bootstrap support for H3D762 as seed ortholog is 100%.

Group of orthologs #3019. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:265

F6PP92              	100.00%		Q4SYH6              	100.00%
Bootstrap support for F6PP92 as seed ortholog is 100%.
Bootstrap support for Q4SYH6 as seed ortholog is 100%.

Group of orthologs #3020. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

H2XUN3              	100.00%		H3CE66              	100.00%
Bootstrap support for H2XUN3 as seed ortholog is 100%.
Bootstrap support for H3CE66 as seed ortholog is 100%.

Group of orthologs #3021. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

F6ZN60              	100.00%		H3DFZ2              	100.00%
Bootstrap support for F6ZN60 as seed ortholog is 100%.
Bootstrap support for H3DFZ2 as seed ortholog is 100%.

Group of orthologs #3022. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:265

H2XRN4              	100.00%		H3DJB5              	100.00%
Bootstrap support for H2XRN4 as seed ortholog is 100%.
Bootstrap support for H3DJB5 as seed ortholog is 100%.

Group of orthologs #3023. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 T.nigroviridis:6

H2XK16              	100.00%		Q4S9G0              	100.00%
Bootstrap support for H2XK16 as seed ortholog is 60%.
Alternative seed ortholog is F7AHT0 (2 bits away from this cluster)
Bootstrap support for Q4S9G0 as seed ortholog is 78%.

Group of orthologs #3024. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 T.nigroviridis:22

H2XNB4              	100.00%		Q4S1X7              	100.00%
Bootstrap support for H2XNB4 as seed ortholog is 100%.
Bootstrap support for Q4S1X7 as seed ortholog is 87%.

Group of orthologs #3025. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:126

Q8T883              	100.00%		H3DQH8              	100.00%
Bootstrap support for Q8T883 as seed ortholog is 99%.
Bootstrap support for H3DQH8 as seed ortholog is 99%.

Group of orthologs #3026. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:113

F6XHP5              	100.00%		H3CNN7              	100.00%
                    	       		H3CTF5              	31.28%
                    	       		H3D821              	29.73%
                    	       		H3D3Q5              	27.39%
                    	       		H3D3Q6              	27.16%
                    	       		H3DLB3              	27.00%
                    	       		H3D3Q7              	25.84%
                    	       		H3CWV4              	20.16%
                    	       		H3CR87              	19.53%
                    	       		H3D822              	18.37%
                    	       		H3D3P6              	15.95%
                    	       		H3CXP8              	12.14%
Bootstrap support for F6XHP5 as seed ortholog is 99%.
Bootstrap support for H3CNN7 as seed ortholog is 99%.

Group of orthologs #3027. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:207

F7B1Y1              	100.00%		H3C9J8              	100.00%
Q8I7D5              	75.86%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for H3C9J8 as seed ortholog is 100%.

Group of orthologs #3028. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:172

H2XUW3              	100.00%		H3CIS8              	100.00%
                    	       		H3DIN6              	6.66%
Bootstrap support for H2XUW3 as seed ortholog is 100%.
Bootstrap support for H3CIS8 as seed ortholog is 100%.

Group of orthologs #3029. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:64

F6X0G2              	100.00%		H3DIA3              	100.00%
                    	       		H3DJI8              	7.11%
Bootstrap support for F6X0G2 as seed ortholog is 100%.
Bootstrap support for H3DIA3 as seed ortholog is 90%.

Group of orthologs #3030. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:120

F6UQX1              	100.00%		H3CIG0              	100.00%
Bootstrap support for F6UQX1 as seed ortholog is 100%.
Bootstrap support for H3CIG0 as seed ortholog is 99%.

Group of orthologs #3031. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:264

F6UE24              	100.00%		H3CNW9              	100.00%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for H3CNW9 as seed ortholog is 100%.

Group of orthologs #3032. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:264

F6WYC4              	100.00%		H3CJA3              	100.00%
Bootstrap support for F6WYC4 as seed ortholog is 100%.
Bootstrap support for H3CJA3 as seed ortholog is 100%.

Group of orthologs #3033. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:55

F6Y437              	100.00%		H3CKN3              	100.00%
Bootstrap support for F6Y437 as seed ortholog is 100%.
Bootstrap support for H3CKN3 as seed ortholog is 92%.

Group of orthologs #3034. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:264

F6ZJB9              	100.00%		H3CJX4              	100.00%
Bootstrap support for F6ZJB9 as seed ortholog is 100%.
Bootstrap support for H3CJX4 as seed ortholog is 100%.

Group of orthologs #3035. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:264

F6PSK8              	100.00%		H3DJE4              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 99%.
Bootstrap support for H3DJE4 as seed ortholog is 100%.

Group of orthologs #3036. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:264

F7B355              	100.00%		H3CJP5              	100.00%
Bootstrap support for F7B355 as seed ortholog is 100%.
Bootstrap support for H3CJP5 as seed ortholog is 100%.

Group of orthologs #3037. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:264

F6RRS1              	100.00%		Q4T5L9              	100.00%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for Q4T5L9 as seed ortholog is 100%.

Group of orthologs #3038. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 T.nigroviridis:264

H2XX78              	100.00%		H3D5G5              	100.00%
Bootstrap support for H2XX78 as seed ortholog is 100%.
Bootstrap support for H3D5G5 as seed ortholog is 100%.

Group of orthologs #3039. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 T.nigroviridis:156

F6XMP2              	100.00%		H3D4Y8              	100.00%
                    	       		H3CYW1              	25.30%
                    	       		H3D934              	20.28%
                    	       		H3CPC0              	17.87%
Bootstrap support for F6XMP2 as seed ortholog is 100%.
Bootstrap support for H3D4Y8 as seed ortholog is 99%.

Group of orthologs #3040. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:13

F6R8W1              	100.00%		H3D7R5              	100.00%
                    	       		Q4S7U5              	19.76%
                    	       		H3CE80              	16.23%
Bootstrap support for F6R8W1 as seed ortholog is 99%.
Bootstrap support for H3D7R5 as seed ortholog is 99%.

Group of orthologs #3041. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 T.nigroviridis:263

H2XVM6              	100.00%		H3DKR2              	100.00%
                    	       		H3CW48              	14.54%
Bootstrap support for H2XVM6 as seed ortholog is 100%.
Bootstrap support for H3DKR2 as seed ortholog is 100%.

Group of orthologs #3042. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 T.nigroviridis:263

H2XVJ7              	100.00%		H3C356              	100.00%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for H3C356 as seed ortholog is 100%.

Group of orthologs #3043. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 T.nigroviridis:263

F7BPY2              	100.00%		H3CW22              	100.00%
Bootstrap support for F7BPY2 as seed ortholog is 100%.
Bootstrap support for H3CW22 as seed ortholog is 100%.

Group of orthologs #3044. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 T.nigroviridis:263

F7B480              	100.00%		H3CZF9              	100.00%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for H3CZF9 as seed ortholog is 100%.

Group of orthologs #3045. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:152

F6TEQ0              	100.00%		H3CY15              	100.00%
                    	       		H3D814              	100.00%
                    	       		H3D9S3              	34.91%
Bootstrap support for F6TEQ0 as seed ortholog is 100%.
Bootstrap support for H3CY15 as seed ortholog is 100%.
Bootstrap support for H3D814 as seed ortholog is 100%.

Group of orthologs #3046. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:94

F6X184              	100.00%		H3DG03              	100.00%
                    	       		H3CL80              	24.35%
                    	       		H3DHC4              	18.48%
Bootstrap support for F6X184 as seed ortholog is 100%.
Bootstrap support for H3DG03 as seed ortholog is 96%.

Group of orthologs #3047. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:262

F6ZW37              	100.00%		H3C6S7              	100.00%
Bootstrap support for F6ZW37 as seed ortholog is 100%.
Bootstrap support for H3C6S7 as seed ortholog is 100%.

Group of orthologs #3048. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:262

H2XL93              	100.00%		H3CK29              	100.00%
Bootstrap support for H2XL93 as seed ortholog is 100%.
Bootstrap support for H3CK29 as seed ortholog is 100%.

Group of orthologs #3049. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:262

F7BK27              	100.00%		H3CSG2              	100.00%
Bootstrap support for F7BK27 as seed ortholog is 100%.
Bootstrap support for H3CSG2 as seed ortholog is 100%.

Group of orthologs #3050. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:262

F6ZZC3              	100.00%		H3D0L2              	100.00%
Bootstrap support for F6ZZC3 as seed ortholog is 100%.
Bootstrap support for H3D0L2 as seed ortholog is 100%.

Group of orthologs #3051. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:126

F6ZID3              	100.00%		H3DMQ0              	100.00%
Bootstrap support for F6ZID3 as seed ortholog is 100%.
Bootstrap support for H3DMQ0 as seed ortholog is 99%.

Group of orthologs #3052. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:262

H2XV90              	100.00%		H3D4V8              	100.00%
Bootstrap support for H2XV90 as seed ortholog is 100%.
Bootstrap support for H3D4V8 as seed ortholog is 100%.

Group of orthologs #3053. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:6

F7BIC8              	100.00%		H3DM39              	100.00%
Bootstrap support for F7BIC8 as seed ortholog is 99%.
Bootstrap support for H3DM39 as seed ortholog is 75%.

Group of orthologs #3054. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 T.nigroviridis:262

H2XX21              	100.00%		H3DMY0              	100.00%
Bootstrap support for H2XX21 as seed ortholog is 100%.
Bootstrap support for H3DMY0 as seed ortholog is 100%.

Group of orthologs #3055. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 T.nigroviridis:51

F6ZD62              	100.00%		C4XVD1              	100.00%
                    	       		H3CEV6              	16.58%
                    	       		H3C667              	12.99%
                    	       		Q4RXW2              	12.82%
                    	       		C4XVD3              	11.45%
Bootstrap support for F6ZD62 as seed ortholog is 100%.
Bootstrap support for C4XVD1 as seed ortholog is 98%.

Group of orthologs #3056. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 T.nigroviridis:128

F6QE09              	100.00%		H3CVL6              	100.00%
                    	       		H3CFK2              	26.96%
Bootstrap support for F6QE09 as seed ortholog is 97%.
Bootstrap support for H3CVL6 as seed ortholog is 100%.

Group of orthologs #3057. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 T.nigroviridis:261

Q4H2Z5              	100.00%		H3DPN7              	100.00%
                    	       		H3DHL5              	22.11%
Bootstrap support for Q4H2Z5 as seed ortholog is 100%.
Bootstrap support for H3DPN7 as seed ortholog is 100%.

Group of orthologs #3058. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 T.nigroviridis:261

F6QND3              	100.00%		H3CN65              	100.00%
Bootstrap support for F6QND3 as seed ortholog is 100%.
Bootstrap support for H3CN65 as seed ortholog is 100%.

Group of orthologs #3059. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 T.nigroviridis:261

F6RE18              	100.00%		H3D521              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for H3D521 as seed ortholog is 100%.

Group of orthologs #3060. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 T.nigroviridis:261

F7AEP2              	100.00%		H3CUZ2              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for H3CUZ2 as seed ortholog is 100%.

Group of orthologs #3061. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F7B4R7              	100.00%		Q4SNS1              	100.00%
H2XM06              	100.00%		
F6T7Z6              	56.47%		
Bootstrap support for F7B4R7 as seed ortholog is 100%.
Bootstrap support for H2XM06 as seed ortholog is 100%.
Bootstrap support for Q4SNS1 as seed ortholog is 100%.

Group of orthologs #3062. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:47

H2XLI1              	100.00%		H3D7E4              	100.00%
                    	       		H3DDH0              	7.03%
Bootstrap support for H2XLI1 as seed ortholog is 100%.
Bootstrap support for H3D7E4 as seed ortholog is 92%.

Group of orthologs #3063. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:260

F6T0U6              	100.00%		H3CIP9              	100.00%
Bootstrap support for F6T0U6 as seed ortholog is 100%.
Bootstrap support for H3CIP9 as seed ortholog is 100%.

Group of orthologs #3064. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:260

F6T1Y9              	100.00%		H3CJ42              	100.00%
Bootstrap support for F6T1Y9 as seed ortholog is 100%.
Bootstrap support for H3CJ42 as seed ortholog is 100%.

Group of orthologs #3065. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:260

F6QVW6              	100.00%		H3CVJ6              	100.00%
Bootstrap support for F6QVW6 as seed ortholog is 100%.
Bootstrap support for H3CVJ6 as seed ortholog is 100%.

Group of orthologs #3066. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:260

F7B499              	100.00%		H3CAM6              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for H3CAM6 as seed ortholog is 100%.

Group of orthologs #3067. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:260

F6WUF6              	100.00%		H3D8N5              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for H3D8N5 as seed ortholog is 100%.

Group of orthologs #3068. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:58

F7BHV9              	100.00%		H3CUT2              	100.00%
Bootstrap support for F7BHV9 as seed ortholog is 100%.
Bootstrap support for H3CUT2 as seed ortholog is 98%.

Group of orthologs #3069. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 T.nigroviridis:68

F6QE62              	100.00%		Q4T6M6              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for Q4T6M6 as seed ortholog is 99%.

Group of orthologs #3070. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

F6S7T3              	100.00%		H3BYT4              	100.00%
Bootstrap support for F6S7T3 as seed ortholog is 100%.
Bootstrap support for H3BYT4 as seed ortholog is 100%.

Group of orthologs #3071. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

F6SSN4              	100.00%		H3BX11              	100.00%
Bootstrap support for F6SSN4 as seed ortholog is 100%.
Bootstrap support for H3BX11 as seed ortholog is 100%.

Group of orthologs #3072. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:201

F6X9U7              	100.00%		H3C1J2              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for H3C1J2 as seed ortholog is 100%.

Group of orthologs #3073. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

H2Y0Q6              	100.00%		H3C3Q5              	100.00%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for H3C3Q5 as seed ortholog is 100%.

Group of orthologs #3074. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

F6WS50              	100.00%		H3DLX1              	100.00%
Bootstrap support for F6WS50 as seed ortholog is 100%.
Bootstrap support for H3DLX1 as seed ortholog is 100%.

Group of orthologs #3075. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

H2XQK5              	100.00%		H3CZJ1              	100.00%
Bootstrap support for H2XQK5 as seed ortholog is 100%.
Bootstrap support for H3CZJ1 as seed ortholog is 100%.

Group of orthologs #3076. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

F6VLF4              	100.00%		Q4SKC9              	100.00%
Bootstrap support for F6VLF4 as seed ortholog is 100%.
Bootstrap support for Q4SKC9 as seed ortholog is 100%.

Group of orthologs #3077. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:259

H2XQH7              	100.00%		H3DIK3              	100.00%
Bootstrap support for H2XQH7 as seed ortholog is 100%.
Bootstrap support for H3DIK3 as seed ortholog is 100%.

Group of orthologs #3078. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 T.nigroviridis:259

H2XTT0              	100.00%		Q4SLC8              	100.00%
Bootstrap support for H2XTT0 as seed ortholog is 100%.
Bootstrap support for Q4SLC8 as seed ortholog is 100%.

Group of orthologs #3079. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 T.nigroviridis:258

H2Y2K0              	100.00%		H3DNQ3              	100.00%
                    	       		H3DBM8              	55.81%
                    	       		H3CB27              	11.62%
Bootstrap support for H2Y2K0 as seed ortholog is 100%.
Bootstrap support for H3DNQ3 as seed ortholog is 100%.

Group of orthologs #3080. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:181

H2XL75              	100.00%		H3D2F9              	100.00%
                    	       		H3CCA1              	20.31%
Bootstrap support for H2XL75 as seed ortholog is 99%.
Bootstrap support for H3D2F9 as seed ortholog is 99%.

Group of orthologs #3081. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:258

F6TU56              	100.00%		H3D605              	100.00%
Bootstrap support for F6TU56 as seed ortholog is 100%.
Bootstrap support for H3D605 as seed ortholog is 100%.

Group of orthologs #3082. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:258

F6Y0K7              	100.00%		H3CYQ9              	100.00%
Bootstrap support for F6Y0K7 as seed ortholog is 99%.
Bootstrap support for H3CYQ9 as seed ortholog is 100%.

Group of orthologs #3083. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 T.nigroviridis:105

H2XUE7              	100.00%		H3CQC2              	100.00%
Bootstrap support for H2XUE7 as seed ortholog is 100%.
Bootstrap support for H3CQC2 as seed ortholog is 99%.

Group of orthologs #3084. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:258

F6WXJ5              	100.00%		Q4RN61              	100.00%
Bootstrap support for F6WXJ5 as seed ortholog is 99%.
Bootstrap support for Q4RN61 as seed ortholog is 100%.

Group of orthologs #3085. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

F6RGI4              	100.00%		H3CCQ6              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for H3CCQ6 as seed ortholog is 100%.

Group of orthologs #3086. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

F7A9N7              	100.00%		H3C0V3              	100.00%
Bootstrap support for F7A9N7 as seed ortholog is 100%.
Bootstrap support for H3C0V3 as seed ortholog is 100%.

Group of orthologs #3087. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:98

F6YFI7              	100.00%		H3CCW6              	100.00%
Bootstrap support for F6YFI7 as seed ortholog is 100%.
Bootstrap support for H3CCW6 as seed ortholog is 99%.

Group of orthologs #3088. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

F6UGM6              	100.00%		H3CRL7              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for H3CRL7 as seed ortholog is 100%.

Group of orthologs #3089. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

H2XPE2              	100.00%		H3C0V2              	100.00%
Bootstrap support for H2XPE2 as seed ortholog is 100%.
Bootstrap support for H3C0V2 as seed ortholog is 100%.

Group of orthologs #3090. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

F6UAY9              	100.00%		H3D3S8              	100.00%
Bootstrap support for F6UAY9 as seed ortholog is 100%.
Bootstrap support for H3D3S8 as seed ortholog is 100%.

Group of orthologs #3091. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:119

F6ZJP7              	100.00%		H3DDS8              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for H3DDS8 as seed ortholog is 100%.

Group of orthologs #3092. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

F6YSG2              	100.00%		H3DJU3              	100.00%
Bootstrap support for F6YSG2 as seed ortholog is 100%.
Bootstrap support for H3DJU3 as seed ortholog is 100%.

Group of orthologs #3093. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

H2XL84              	100.00%		H3DBC9              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for H3DBC9 as seed ortholog is 100%.

Group of orthologs #3094. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 T.nigroviridis:25

H2Y360              	100.00%		H3CR25              	100.00%
Bootstrap support for H2Y360 as seed ortholog is 93%.
Bootstrap support for H3CR25 as seed ortholog is 78%.

Group of orthologs #3095. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 T.nigroviridis:257

H2XQ06              	100.00%		H3DGV2              	100.00%
Bootstrap support for H2XQ06 as seed ortholog is 100%.
Bootstrap support for H3DGV2 as seed ortholog is 100%.

Group of orthologs #3096. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

H2XUA2              	100.00%		H3CPC8              	100.00%
                    	       		H3C1X3              	31.24%
                    	       		H3CHF9              	24.95%
                    	       		H3CPP9              	19.78%
Bootstrap support for H2XUA2 as seed ortholog is 100%.
Bootstrap support for H3CPC8 as seed ortholog is 100%.

Group of orthologs #3097. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

F7B3P4              	100.00%		H3CDK0              	100.00%
                    	       		H3DPX4              	20.69%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for H3CDK0 as seed ortholog is 100%.

Group of orthologs #3098. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

F6Q8V8              	100.00%		H3C4B5              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for H3C4B5 as seed ortholog is 100%.

Group of orthologs #3099. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

F6VIA9              	100.00%		H3CZ32              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for H3CZ32 as seed ortholog is 100%.

Group of orthologs #3100. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

F6PMD1              	100.00%		H3DMR9              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for H3DMR9 as seed ortholog is 100%.

Group of orthologs #3101. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

F7BNX7              	100.00%		H3CU11              	100.00%
Bootstrap support for F7BNX7 as seed ortholog is 100%.
Bootstrap support for H3CU11 as seed ortholog is 100%.

Group of orthologs #3102. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:194

F6WQJ1              	100.00%		H3DJA2              	100.00%
Bootstrap support for F6WQJ1 as seed ortholog is 100%.
Bootstrap support for H3DJA2 as seed ortholog is 100%.

Group of orthologs #3103. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 T.nigroviridis:256

F6Z8U5              	100.00%		H3DI95              	100.00%
Bootstrap support for F6Z8U5 as seed ortholog is 100%.
Bootstrap support for H3DI95 as seed ortholog is 100%.

Group of orthologs #3104. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F6Z6W8              	100.00%		H3DGQ0              	100.00%
F7A7R4              	13.71%		H3CJ92              	40.22%
Bootstrap support for F6Z6W8 as seed ortholog is 100%.
Bootstrap support for H3DGQ0 as seed ortholog is 100%.

Group of orthologs #3105. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F6XQ02              	100.00%		H3BWC3              	100.00%
                    	       		H3CWZ2              	17.04%
Bootstrap support for F6XQ02 as seed ortholog is 100%.
Bootstrap support for H3BWC3 as seed ortholog is 100%.

Group of orthologs #3106. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F7AND3              	100.00%		H3CU04              	100.00%
                    	       		H3CY14              	6.90%
Bootstrap support for F7AND3 as seed ortholog is 100%.
Bootstrap support for H3CU04 as seed ortholog is 100%.

Group of orthologs #3107. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F6SCE7              	100.00%		H3CF68              	100.00%
Bootstrap support for F6SCE7 as seed ortholog is 100%.
Bootstrap support for H3CF68 as seed ortholog is 100%.

Group of orthologs #3108. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F6ZDT1              	100.00%		H3C0A3              	100.00%
Bootstrap support for F6ZDT1 as seed ortholog is 100%.
Bootstrap support for H3C0A3 as seed ortholog is 100%.

Group of orthologs #3109. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F6TQR9              	100.00%		H3CU34              	100.00%
Bootstrap support for F6TQR9 as seed ortholog is 100%.
Bootstrap support for H3CU34 as seed ortholog is 100%.

Group of orthologs #3110. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

F6SFB8              	100.00%		H3D2D3              	100.00%
Bootstrap support for F6SFB8 as seed ortholog is 100%.
Bootstrap support for H3D2D3 as seed ortholog is 100%.

Group of orthologs #3111. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:178

F6XIW9              	100.00%		H3D1D5              	100.00%
Bootstrap support for F6XIW9 as seed ortholog is 99%.
Bootstrap support for H3D1D5 as seed ortholog is 99%.

Group of orthologs #3112. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:196

H2XXD0              	100.00%		H3CA04              	100.00%
Bootstrap support for H2XXD0 as seed ortholog is 100%.
Bootstrap support for H3CA04 as seed ortholog is 100%.

Group of orthologs #3113. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 T.nigroviridis:255

H2XWQ2              	100.00%		H3CBX1              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for H3CBX1 as seed ortholog is 100%.

Group of orthologs #3114. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:255

H2XQU6              	100.00%		H3D5W1              	100.00%
Bootstrap support for H2XQU6 as seed ortholog is 98%.
Bootstrap support for H3D5W1 as seed ortholog is 100%.

Group of orthologs #3115. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F6T3G6              	100.00%		H3D5R1              	100.00%
F6WG12              	21.20%		
Bootstrap support for F6T3G6 as seed ortholog is 100%.
Bootstrap support for H3D5R1 as seed ortholog is 100%.

Group of orthologs #3116. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F6WNQ6              	100.00%		H3D5I4              	100.00%
                    	       		H3CIU2              	21.66%
Bootstrap support for F6WNQ6 as seed ortholog is 100%.
Bootstrap support for H3D5I4 as seed ortholog is 100%.

Group of orthologs #3117. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F6Y089              	100.00%		H3CAD4              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for H3CAD4 as seed ortholog is 100%.

Group of orthologs #3118. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F6V9X6              	100.00%		H3CJX9              	100.00%
Bootstrap support for F6V9X6 as seed ortholog is 100%.
Bootstrap support for H3CJX9 as seed ortholog is 100%.

Group of orthologs #3119. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F6RIG9              	100.00%		H3DHJ7              	100.00%
Bootstrap support for F6RIG9 as seed ortholog is 100%.
Bootstrap support for H3DHJ7 as seed ortholog is 100%.

Group of orthologs #3120. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F6VXB1              	100.00%		H3D818              	100.00%
Bootstrap support for F6VXB1 as seed ortholog is 100%.
Bootstrap support for H3D818 as seed ortholog is 100%.

Group of orthologs #3121. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F7AUY7              	100.00%		H3DAZ1              	100.00%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for H3DAZ1 as seed ortholog is 100%.

Group of orthologs #3122. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 T.nigroviridis:254

F7BMH5              	100.00%		H3DCQ5              	100.00%
Bootstrap support for F7BMH5 as seed ortholog is 100%.
Bootstrap support for H3DCQ5 as seed ortholog is 100%.

Group of orthologs #3123. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 T.nigroviridis:109

F6Y7X3              	100.00%		H3D1K1              	100.00%
                    	       		H3CSZ5              	24.38%
                    	       		H3CP83              	11.58%
                    	       		H3DLR1              	5.17%
Bootstrap support for F6Y7X3 as seed ortholog is 96%.
Bootstrap support for H3D1K1 as seed ortholog is 99%.

Group of orthologs #3124. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:253

F6ZMG2              	100.00%		H3CHV6              	100.00%
F6XNX3              	51.40%		
Bootstrap support for F6ZMG2 as seed ortholog is 100%.
Bootstrap support for H3CHV6 as seed ortholog is 100%.

Group of orthologs #3125. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 T.nigroviridis:253

F6WVH9              	100.00%		H3CHB8              	100.00%
Bootstrap support for F6WVH9 as seed ortholog is 60%.
Alternative seed ortholog is F6V5Y1 (13 bits away from this cluster)
Bootstrap support for H3CHB8 as seed ortholog is 100%.

Group of orthologs #3126. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:253

H2XR44              	100.00%		H3CAR2              	100.00%
Bootstrap support for H2XR44 as seed ortholog is 78%.
Bootstrap support for H3CAR2 as seed ortholog is 100%.

Group of orthologs #3127. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:253

F6Y6X7              	100.00%		H3D8A1              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for H3D8A1 as seed ortholog is 100%.

Group of orthologs #3128. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:90

F6Y7Y1              	100.00%		H3D8J7              	100.00%
Bootstrap support for F6Y7Y1 as seed ortholog is 98%.
Bootstrap support for H3D8J7 as seed ortholog is 99%.

Group of orthologs #3129. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:124

H2XWI8              	100.00%		H3CTK6              	100.00%
Bootstrap support for H2XWI8 as seed ortholog is 100%.
Bootstrap support for H3CTK6 as seed ortholog is 99%.

Group of orthologs #3130. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:186

F7BEX9              	100.00%		H3DJ00              	100.00%
Bootstrap support for F7BEX9 as seed ortholog is 99%.
Bootstrap support for H3DJ00 as seed ortholog is 100%.

Group of orthologs #3131. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:91

H2XZ21              	100.00%		H3CYL3              	100.00%
Bootstrap support for H2XZ21 as seed ortholog is 100%.
Bootstrap support for H3CYL3 as seed ortholog is 99%.

Group of orthologs #3132. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:253

F6ZPU3              	100.00%		Q4RZR9              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for Q4RZR9 as seed ortholog is 100%.

Group of orthologs #3133. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 T.nigroviridis:253

H2XSK2              	100.00%		H3DKZ5              	100.00%
Bootstrap support for H2XSK2 as seed ortholog is 100%.
Bootstrap support for H3DKZ5 as seed ortholog is 100%.

Group of orthologs #3134. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:34

F6WI19              	100.00%		H3DBY6              	100.00%
Q1RL20              	69.28%		H3D5E4              	33.88%
Q1RL21              	46.59%		H3DHF9              	11.92%
H2XMP0              	38.57%		
H2XZ50              	35.84%		
Bootstrap support for F6WI19 as seed ortholog is 100%.
Bootstrap support for H3DBY6 as seed ortholog is 84%.

Group of orthologs #3135. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

F6YIK6              	100.00%		H3CCM0              	100.00%
                    	       		H3CV54              	30.38%
Bootstrap support for F6YIK6 as seed ortholog is 100%.
Bootstrap support for H3CCM0 as seed ortholog is 100%.

Group of orthologs #3136. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:206

F7ANK8              	100.00%		H3CYV0              	100.00%
                    	       		H3DCN3              	56.18%
Bootstrap support for F7ANK8 as seed ortholog is 100%.
Bootstrap support for H3CYV0 as seed ortholog is 100%.

Group of orthologs #3137. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

F6TZ23              	100.00%		H3CAG8              	100.00%
Bootstrap support for F6TZ23 as seed ortholog is 100%.
Bootstrap support for H3CAG8 as seed ortholog is 100%.

Group of orthologs #3138. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

F6QU62              	100.00%		H3D020              	100.00%
Bootstrap support for F6QU62 as seed ortholog is 100%.
Bootstrap support for H3D020 as seed ortholog is 100%.

Group of orthologs #3139. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

F6ZQX9              	100.00%		H3C9W0              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for H3C9W0 as seed ortholog is 100%.

Group of orthologs #3140. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:45

F6XLN4              	100.00%		H3CTJ3              	100.00%
Bootstrap support for F6XLN4 as seed ortholog is 100%.
Bootstrap support for H3CTJ3 as seed ortholog is 83%.

Group of orthologs #3141. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:125

H2XS72              	100.00%		H3CNE2              	100.00%
Bootstrap support for H2XS72 as seed ortholog is 100%.
Bootstrap support for H3CNE2 as seed ortholog is 99%.

Group of orthologs #3142. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

F7A4X2              	100.00%		H3D8W1              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for H3D8W1 as seed ortholog is 100%.

Group of orthologs #3143. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

H2XR12              	100.00%		H3CZF7              	100.00%
Bootstrap support for H2XR12 as seed ortholog is 100%.
Bootstrap support for H3CZF7 as seed ortholog is 100%.

Group of orthologs #3144. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

F6YUM3              	100.00%		H3DLB4              	100.00%
Bootstrap support for F6YUM3 as seed ortholog is 100%.
Bootstrap support for H3DLB4 as seed ortholog is 100%.

Group of orthologs #3145. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

H2XP93              	100.00%		H3D418              	100.00%
Bootstrap support for H2XP93 as seed ortholog is 100%.
Bootstrap support for H3D418 as seed ortholog is 100%.

Group of orthologs #3146. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 T.nigroviridis:252

H2XX55              	100.00%		Q4RPI5              	100.00%
Bootstrap support for H2XX55 as seed ortholog is 100%.
Bootstrap support for Q4RPI5 as seed ortholog is 100%.

Group of orthologs #3147. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:132

F6WZU2              	100.00%		H3CPW0              	100.00%
                    	       		H3C966              	28.00%
                    	       		H3CQE2              	26.33%
Bootstrap support for F6WZU2 as seed ortholog is 100%.
Bootstrap support for H3CPW0 as seed ortholog is 99%.

Group of orthologs #3148. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:251

F6R1Q7              	100.00%		H3CPS5              	100.00%
                    	       		H3DPU7              	33.71%
Bootstrap support for F6R1Q7 as seed ortholog is 100%.
Bootstrap support for H3CPS5 as seed ortholog is 100%.

Group of orthologs #3149. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:251

H2XMJ7              	100.00%		H3C5H7              	100.00%
                    	       		H3DEI1              	24.51%
Bootstrap support for H2XMJ7 as seed ortholog is 100%.
Bootstrap support for H3C5H7 as seed ortholog is 100%.

Group of orthologs #3150. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:126

F6ZHQ2              	100.00%		Q4SJS2              	100.00%
                    	       		H3C7X9              	20.36%
Bootstrap support for F6ZHQ2 as seed ortholog is 100%.
Bootstrap support for Q4SJS2 as seed ortholog is 100%.

Group of orthologs #3151. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:251

F6ZYG1              	100.00%		H3CCF8              	100.00%
Bootstrap support for F6ZYG1 as seed ortholog is 100%.
Bootstrap support for H3CCF8 as seed ortholog is 100%.

Group of orthologs #3152. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:251

F6ZN66              	100.00%		H3CJ80              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for H3CJ80 as seed ortholog is 100%.

Group of orthologs #3153. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:251

H2XRC8              	100.00%		H3CW24              	100.00%
Bootstrap support for H2XRC8 as seed ortholog is 100%.
Bootstrap support for H3CW24 as seed ortholog is 100%.

Group of orthologs #3154. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 T.nigroviridis:251

F6XR12              	100.00%		Q4SUY7              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for Q4SUY7 as seed ortholog is 100%.

Group of orthologs #3155. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:250

H2XJX5              	100.00%		H3D5L0              	100.00%
F6QRT7              	9.53%		H3CDJ8              	38.13%
Bootstrap support for H2XJX5 as seed ortholog is 100%.
Bootstrap support for H3D5L0 as seed ortholog is 100%.

Group of orthologs #3156. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:250

F6QVI1              	100.00%		H3C977              	100.00%
Bootstrap support for F6QVI1 as seed ortholog is 100%.
Bootstrap support for H3C977 as seed ortholog is 100%.

Group of orthologs #3157. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:250

F6WML9              	100.00%		H3CNJ6              	100.00%
Bootstrap support for F6WML9 as seed ortholog is 100%.
Bootstrap support for H3CNJ6 as seed ortholog is 100%.

Group of orthologs #3158. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:250

F6PM34              	100.00%		H3DM32              	100.00%
Bootstrap support for F6PM34 as seed ortholog is 100%.
Bootstrap support for H3DM32 as seed ortholog is 100%.

Group of orthologs #3159. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 T.nigroviridis:250

H2XQ41              	100.00%		H3CBP7              	100.00%
Bootstrap support for H2XQ41 as seed ortholog is 100%.
Bootstrap support for H3CBP7 as seed ortholog is 100%.

Group of orthologs #3160. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 T.nigroviridis:101

H2XUX4              	100.00%		H3DL67              	100.00%
Bootstrap support for H2XUX4 as seed ortholog is 99%.
Bootstrap support for H3DL67 as seed ortholog is 99%.

Group of orthologs #3161. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:168

H2Y2W3              	100.00%		H3DGX0              	100.00%
Bootstrap support for H2Y2W3 as seed ortholog is 100%.
Bootstrap support for H3DGX0 as seed ortholog is 100%.

Group of orthologs #3162. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:109

H2Y1F2              	100.00%		H3D577              	100.00%
                    	       		H3CZ64              	15.98%
                    	       		H3DD76              	12.79%
                    	       		H3C1D1              	8.07%
Bootstrap support for H2Y1F2 as seed ortholog is 100%.
Bootstrap support for H3D577 as seed ortholog is 99%.

Group of orthologs #3163. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:43

F6PHF4              	100.00%		H3DJL9              	100.00%
                    	       		H3DPK3              	12.38%
Bootstrap support for F6PHF4 as seed ortholog is 100%.
Bootstrap support for H3DJL9 as seed ortholog is 44%.
Alternative seed ortholog is H3CPZ9 (43 bits away from this cluster)

Group of orthologs #3164. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:249

Q4H356              	100.00%		H3CUA3              	100.00%
                    	       		H3D724              	17.59%
Bootstrap support for Q4H356 as seed ortholog is 86%.
Bootstrap support for H3CUA3 as seed ortholog is 100%.

Group of orthologs #3165. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:249

F6U497              	100.00%		H3C7S8              	100.00%
Bootstrap support for F6U497 as seed ortholog is 100%.
Bootstrap support for H3C7S8 as seed ortholog is 100%.

Group of orthologs #3166. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:249

F6Q7X0              	100.00%		H3DL80              	100.00%
Bootstrap support for F6Q7X0 as seed ortholog is 100%.
Bootstrap support for H3DL80 as seed ortholog is 100%.

Group of orthologs #3167. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:249

F6TXK0              	100.00%		H3DM41              	100.00%
Bootstrap support for F6TXK0 as seed ortholog is 100%.
Bootstrap support for H3DM41 as seed ortholog is 100%.

Group of orthologs #3168. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:249

F6Y844              	100.00%		H3DKR7              	100.00%
Bootstrap support for F6Y844 as seed ortholog is 100%.
Bootstrap support for H3DKR7 as seed ortholog is 100%.

Group of orthologs #3169. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 T.nigroviridis:249

H2Y1H7              	100.00%		H3DBF8              	100.00%
Bootstrap support for H2Y1H7 as seed ortholog is 100%.
Bootstrap support for H3DBF8 as seed ortholog is 100%.

Group of orthologs #3170. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:168

Q4H3J7              	100.00%		H3DHL4              	100.00%
                    	       		H3CA67              	22.51%
                    	       		H3DNT2              	15.82%
Bootstrap support for Q4H3J7 as seed ortholog is 100%.
Bootstrap support for H3DHL4 as seed ortholog is 100%.

Group of orthologs #3171. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:248

F6TMD1              	100.00%		H3BWU4              	100.00%
P61802              	100.00%		
Bootstrap support for F6TMD1 as seed ortholog is 100%.
Bootstrap support for P61802 as seed ortholog is 100%.
Bootstrap support for H3BWU4 as seed ortholog is 100%.

Group of orthologs #3172. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:16

F6S566              	100.00%		H3CXY5              	100.00%
                    	       		H3DP12              	20.73%
Bootstrap support for F6S566 as seed ortholog is 99%.
Bootstrap support for H3CXY5 as seed ortholog is 38%.
Alternative seed ortholog is H3DMM8 (16 bits away from this cluster)

Group of orthologs #3173. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:248

F6YIB7              	100.00%		H3CRL8              	100.00%
                    	       		H3D215              	100.00%
Bootstrap support for F6YIB7 as seed ortholog is 100%.
Bootstrap support for H3CRL8 as seed ortholog is 100%.
Bootstrap support for H3D215 as seed ortholog is 100%.

Group of orthologs #3174. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:248

F6WH38              	100.00%		H3DH24              	100.00%
                    	       		H3CYT0              	50.40%
Bootstrap support for F6WH38 as seed ortholog is 100%.
Bootstrap support for H3DH24 as seed ortholog is 100%.

Group of orthologs #3175. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:28

Q4H301              	100.00%		H3D8D5              	100.00%
                    	       		H3D350              	29.24%
Bootstrap support for Q4H301 as seed ortholog is 100%.
Bootstrap support for H3D8D5 as seed ortholog is 73%.
Alternative seed ortholog is H3CXQ0 (28 bits away from this cluster)

Group of orthologs #3176. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:248

F6WQS5              	100.00%		H3C2R2              	100.00%
Bootstrap support for F6WQS5 as seed ortholog is 100%.
Bootstrap support for H3C2R2 as seed ortholog is 100%.

Group of orthologs #3177. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:248

F6R4H7              	100.00%		H3CR48              	100.00%
Bootstrap support for F6R4H7 as seed ortholog is 100%.
Bootstrap support for H3CR48 as seed ortholog is 100%.

Group of orthologs #3178. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:248

H2XND2              	100.00%		H3C4W7              	100.00%
Bootstrap support for H2XND2 as seed ortholog is 98%.
Bootstrap support for H3C4W7 as seed ortholog is 100%.

Group of orthologs #3179. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:150

F6S569              	100.00%		H3DAS7              	100.00%
Bootstrap support for F6S569 as seed ortholog is 100%.
Bootstrap support for H3DAS7 as seed ortholog is 100%.

Group of orthologs #3180. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:92

F6RZT0              	100.00%		H3DKY8              	100.00%
Bootstrap support for F6RZT0 as seed ortholog is 99%.
Bootstrap support for H3DKY8 as seed ortholog is 99%.

Group of orthologs #3181. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 T.nigroviridis:201

F7AZA1              	100.00%		Q4SD17              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for Q4SD17 as seed ortholog is 100%.

Group of orthologs #3182. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

F6QGN1              	100.00%		H3CVT0              	100.00%
                    	       		H3DD88              	20.79%
                    	       		H3CXV1              	14.00%
Bootstrap support for F6QGN1 as seed ortholog is 100%.
Bootstrap support for H3CVT0 as seed ortholog is 100%.

Group of orthologs #3183. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

H2XSL2              	100.00%		H3CGH1              	100.00%
                    	       		H3CKM1              	27.00%
                    	       		H3CH58              	15.37%
Bootstrap support for H2XSL2 as seed ortholog is 100%.
Bootstrap support for H3CGH1 as seed ortholog is 100%.

Group of orthologs #3184. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:44

F6S5L9              	100.00%		H3CCI8              	100.00%
                    	       		H3DQJ7              	9.57%
Bootstrap support for F6S5L9 as seed ortholog is 100%.
Bootstrap support for H3CCI8 as seed ortholog is 91%.

Group of orthologs #3185. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:138

F6S2W5              	100.00%		H3DMA3              	100.00%
                    	       		H3D3M2              	28.79%
Bootstrap support for F6S2W5 as seed ortholog is 100%.
Bootstrap support for H3DMA3 as seed ortholog is 100%.

Group of orthologs #3186. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

F6T1X5              	100.00%		H3C5P4              	100.00%
Bootstrap support for F6T1X5 as seed ortholog is 100%.
Bootstrap support for H3C5P4 as seed ortholog is 100%.

Group of orthologs #3187. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:21

F6UUI1              	100.00%		H3CVT5              	100.00%
Bootstrap support for F6UUI1 as seed ortholog is 100%.
Bootstrap support for H3CVT5 as seed ortholog is 84%.

Group of orthologs #3188. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:182

F6VUS5              	100.00%		H3D6L5              	100.00%
Bootstrap support for F6VUS5 as seed ortholog is 100%.
Bootstrap support for H3D6L5 as seed ortholog is 100%.

Group of orthologs #3189. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

F6W3X7              	100.00%		H3DIT7              	100.00%
Bootstrap support for F6W3X7 as seed ortholog is 100%.
Bootstrap support for H3DIT7 as seed ortholog is 100%.

Group of orthologs #3190. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

F7ASV8              	100.00%		H3DFG8              	100.00%
Bootstrap support for F7ASV8 as seed ortholog is 100%.
Bootstrap support for H3DFG8 as seed ortholog is 100%.

Group of orthologs #3191. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

H2XX93              	100.00%		H3D4N8              	100.00%
Bootstrap support for H2XX93 as seed ortholog is 100%.
Bootstrap support for H3D4N8 as seed ortholog is 100%.

Group of orthologs #3192. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 T.nigroviridis:247

H2XZ71              	100.00%		H3DNJ6              	100.00%
Bootstrap support for H2XZ71 as seed ortholog is 100%.
Bootstrap support for H3DNJ6 as seed ortholog is 100%.

Group of orthologs #3193. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:77

F6Y321              	100.00%		H3CQK1              	100.00%
                    	       		H3CLX8              	60.78%
                    	       		H3CC50              	26.50%
                    	       		H3CED6              	15.55%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for H3CQK1 as seed ortholog is 99%.

Group of orthologs #3194. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:143

F6RGE7              	100.00%		Q4RS28              	100.00%
                    	       		H3CT98              	57.42%
Bootstrap support for F6RGE7 as seed ortholog is 100%.
Bootstrap support for Q4RS28 as seed ortholog is 100%.

Group of orthologs #3195. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:246

F7AG43              	100.00%		Q4SAA3              	100.00%
                    	       		H3CTR1              	55.56%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for Q4SAA3 as seed ortholog is 100%.

Group of orthologs #3196. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:246

F6TL19              	100.00%		H3DKM8              	100.00%
Bootstrap support for F6TL19 as seed ortholog is 100%.
Bootstrap support for H3DKM8 as seed ortholog is 100%.

Group of orthologs #3197. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:246

F6TKL9              	100.00%		Q4S1I6              	100.00%
Bootstrap support for F6TKL9 as seed ortholog is 100%.
Bootstrap support for Q4S1I6 as seed ortholog is 100%.

Group of orthologs #3198. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:103

F6TXW3              	100.00%		Q4SF14              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for Q4SF14 as seed ortholog is 100%.

Group of orthologs #3199. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:102

F6YIF4              	100.00%		H3DEX7              	100.00%
Bootstrap support for F6YIF4 as seed ortholog is 99%.
Bootstrap support for H3DEX7 as seed ortholog is 98%.

Group of orthologs #3200. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:246

F6VUL9              	100.00%		Q4RGY9              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for Q4RGY9 as seed ortholog is 100%.

Group of orthologs #3201. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 T.nigroviridis:246

Q8SSZ0              	100.00%		H3CNV7              	100.00%
Bootstrap support for Q8SSZ0 as seed ortholog is 100%.
Bootstrap support for H3CNV7 as seed ortholog is 100%.

Group of orthologs #3202. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:128

F6U1H7              	100.00%		H3CNV9              	100.00%
                    	       		H3CFU2              	26.32%
                    	       		H3CBS3              	25.06%
                    	       		H3CCL4              	6.78%
Bootstrap support for F6U1H7 as seed ortholog is 99%.
Bootstrap support for H3CNV9 as seed ortholog is 99%.

Group of orthologs #3203. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:148

F6UNM5              	100.00%		H3D4W7              	100.00%
                    	       		H3CTZ1              	47.59%
                    	       		H3DKK0              	39.57%
Bootstrap support for F6UNM5 as seed ortholog is 99%.
Bootstrap support for H3D4W7 as seed ortholog is 99%.

Group of orthologs #3204. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:138

F7A3S4              	100.00%		H3CMP0              	100.00%
F6YQI1              	47.53%		
Bootstrap support for F7A3S4 as seed ortholog is 100%.
Bootstrap support for H3CMP0 as seed ortholog is 99%.

Group of orthologs #3205. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:245

F6UBS1              	100.00%		H3DDC8              	100.00%
H2XP87              	22.59%		
Bootstrap support for F6UBS1 as seed ortholog is 100%.
Bootstrap support for H3DDC8 as seed ortholog is 100%.

Group of orthologs #3206. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:200

F6R982              	100.00%		H3CEZ1              	100.00%
Bootstrap support for F6R982 as seed ortholog is 100%.
Bootstrap support for H3CEZ1 as seed ortholog is 100%.

Group of orthologs #3207. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:245

F6WYD9              	100.00%		H3CXA8              	100.00%
Bootstrap support for F6WYD9 as seed ortholog is 100%.
Bootstrap support for H3CXA8 as seed ortholog is 100%.

Group of orthologs #3208. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:245

F6ZBY5              	100.00%		H3D9R6              	100.00%
Bootstrap support for F6ZBY5 as seed ortholog is 100%.
Bootstrap support for H3D9R6 as seed ortholog is 100%.

Group of orthologs #3209. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:245

Q5VJS0              	100.00%		H3CNZ8              	100.00%
Bootstrap support for Q5VJS0 as seed ortholog is 100%.
Bootstrap support for H3CNZ8 as seed ortholog is 100%.

Group of orthologs #3210. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 T.nigroviridis:245

H2XR59              	100.00%		H3D967              	100.00%
Bootstrap support for H2XR59 as seed ortholog is 100%.
Bootstrap support for H3D967 as seed ortholog is 100%.

Group of orthologs #3211. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:63

F6XGK4              	100.00%		Q4SQ34              	100.00%
                    	       		H3D7K3              	8.85%
Bootstrap support for F6XGK4 as seed ortholog is 77%.
Bootstrap support for Q4SQ34 as seed ortholog is 99%.

Group of orthologs #3212. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:244

F7BPH5              	100.00%		H3CCK2              	100.00%
Bootstrap support for F7BPH5 as seed ortholog is 88%.
Bootstrap support for H3CCK2 as seed ortholog is 100%.

Group of orthologs #3213. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:147

F6RXD4              	100.00%		Q4S8Y8              	100.00%
Bootstrap support for F6RXD4 as seed ortholog is 100%.
Bootstrap support for Q4S8Y8 as seed ortholog is 100%.

Group of orthologs #3214. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 T.nigroviridis:244

H2XQQ0              	100.00%		H3CYS2              	100.00%
Bootstrap support for H2XQQ0 as seed ortholog is 100%.
Bootstrap support for H3CYS2 as seed ortholog is 100%.

Group of orthologs #3215. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 T.nigroviridis:244

F7BFG7              	100.00%		H3DBS8              	100.00%
Bootstrap support for F7BFG7 as seed ortholog is 100%.
Bootstrap support for H3DBS8 as seed ortholog is 100%.

Group of orthologs #3216. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:130

H2XRG0              	100.00%		H3CW26              	100.00%
                    	       		H3DF67              	37.45%
                    	       		H3D0C2              	34.18%
Bootstrap support for H2XRG0 as seed ortholog is 99%.
Bootstrap support for H3CW26 as seed ortholog is 99%.

Group of orthologs #3217. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

Q4H2W4              	100.00%		H3CXB5              	100.00%
                    	       		H3DDW1              	40.94%
                    	       		H3C019              	11.56%
Bootstrap support for Q4H2W4 as seed ortholog is 100%.
Bootstrap support for H3CXB5 as seed ortholog is 100%.

Group of orthologs #3218. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:155

H2XVW6              	100.00%		H3DM89              	100.00%
                    	       		H3D2F4              	36.19%
                    	       		H3CDX5              	20.45%
Bootstrap support for H2XVW6 as seed ortholog is 99%.
Bootstrap support for H3DM89 as seed ortholog is 99%.

Group of orthologs #3219. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

F6RDT5              	100.00%		H3CPF9              	100.00%
H2XVT8              	41.76%		
Bootstrap support for F6RDT5 as seed ortholog is 100%.
Bootstrap support for H3CPF9 as seed ortholog is 100%.

Group of orthologs #3220. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:148

F6W912              	100.00%		H3DBU1              	100.00%
                    	       		H3CYC5              	14.83%
Bootstrap support for F6W912 as seed ortholog is 100%.
Bootstrap support for H3DBU1 as seed ortholog is 99%.

Group of orthologs #3221. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:243

F7AQ12              	100.00%		H3CXQ7              	100.00%
                    	       		H3D5E5              	12.38%
Bootstrap support for F7AQ12 as seed ortholog is 45%.
Alternative seed ortholog is F7A786 (19 bits away from this cluster)
Bootstrap support for H3CXQ7 as seed ortholog is 100%.

Group of orthologs #3222. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:243

H2Y061              	100.00%		H3CDY3              	100.00%
                    	       		H3D1Z4              	11.62%
Bootstrap support for H2Y061 as seed ortholog is 100%.
Bootstrap support for H3CDY3 as seed ortholog is 100%.

Group of orthologs #3223. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

F6PPJ7              	100.00%		H3CJZ5              	100.00%
Bootstrap support for F6PPJ7 as seed ortholog is 100%.
Bootstrap support for H3CJZ5 as seed ortholog is 100%.

Group of orthologs #3224. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

F7AMV0              	100.00%		H3C599              	100.00%
Bootstrap support for F7AMV0 as seed ortholog is 100%.
Bootstrap support for H3C599 as seed ortholog is 100%.

Group of orthologs #3225. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:243

F6UXG6              	100.00%		H3CRN7              	100.00%
Bootstrap support for F6UXG6 as seed ortholog is 100%.
Bootstrap support for H3CRN7 as seed ortholog is 100%.

Group of orthologs #3226. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

F6QBK7              	100.00%		H3DHN7              	100.00%
Bootstrap support for F6QBK7 as seed ortholog is 100%.
Bootstrap support for H3DHN7 as seed ortholog is 100%.

Group of orthologs #3227. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:109

F6XF88              	100.00%		H3D403              	100.00%
Bootstrap support for F6XF88 as seed ortholog is 100%.
Bootstrap support for H3D403 as seed ortholog is 99%.

Group of orthologs #3228. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

F6ZQ39              	100.00%		H3D2K7              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for H3D2K7 as seed ortholog is 100%.

Group of orthologs #3229. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 T.nigroviridis:243

H2XLA1              	100.00%		H3D7D0              	100.00%
Bootstrap support for H2XLA1 as seed ortholog is 100%.
Bootstrap support for H3D7D0 as seed ortholog is 100%.

Group of orthologs #3230. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:160

F6Z9G9              	100.00%		Q4SLT8              	100.00%
Bootstrap support for F6Z9G9 as seed ortholog is 100%.
Bootstrap support for Q4SLT8 as seed ortholog is 99%.

Group of orthologs #3231. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:26

H2XLX4              	100.00%		Q4TAA9              	100.00%
Bootstrap support for H2XLX4 as seed ortholog is 100%.
Bootstrap support for Q4TAA9 as seed ortholog is 80%.

Group of orthologs #3232. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:43

F6Y940              	100.00%		H3CII3              	100.00%
                    	       		H3CXB6              	34.88%
                    	       		H3CP09              	28.20%
                    	       		H3CJE9              	22.38%
Bootstrap support for F6Y940 as seed ortholog is 100%.
Bootstrap support for H3CII3 as seed ortholog is 93%.

Group of orthologs #3233. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:157

F6TMT5              	100.00%		H3CCW3              	100.00%
                    	       		H3D1K7              	100.00%
                    	       		H3CT22              	47.32%
Bootstrap support for F6TMT5 as seed ortholog is 99%.
Bootstrap support for H3CCW3 as seed ortholog is 100%.
Bootstrap support for H3D1K7 as seed ortholog is 100%.

Group of orthologs #3234. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:70

F6X0F3              	100.00%		H3CMY7              	100.00%
                    	       		H3DP84              	20.00%
                    	       		H3CSW4              	13.82%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for H3CMY7 as seed ortholog is 99%.

Group of orthologs #3235. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F6VIZ2              	100.00%		H3DDB7              	100.00%
                    	       		H3DJH5              	15.88%
                    	       		H3DPI2              	8.08%
Bootstrap support for F6VIZ2 as seed ortholog is 100%.
Bootstrap support for H3DDB7 as seed ortholog is 100%.

Group of orthologs #3236. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F6X2B6              	100.00%		H3DHI6              	100.00%
                    	       		H3DJC8              	28.66%
                    	       		H3C2V8              	19.40%
Bootstrap support for F6X2B6 as seed ortholog is 100%.
Bootstrap support for H3DHI6 as seed ortholog is 100%.

Group of orthologs #3237. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F6VDY1              	100.00%		Q4TB99              	100.00%
                    	       		H3CPJ7              	45.94%
                    	       		H3CAR7              	19.80%
Bootstrap support for F6VDY1 as seed ortholog is 100%.
Bootstrap support for Q4TB99 as seed ortholog is 100%.

Group of orthologs #3238. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F6Q7P2              	100.00%		H3D5U3              	100.00%
                    	       		H3DH18              	6.01%
Bootstrap support for F6Q7P2 as seed ortholog is 100%.
Bootstrap support for H3D5U3 as seed ortholog is 100%.

Group of orthologs #3239. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F7B4T0              	100.00%		H3CFL4              	100.00%
                    	       		H3D2Q5              	7.14%
Bootstrap support for F7B4T0 as seed ortholog is 100%.
Bootstrap support for H3CFL4 as seed ortholog is 100%.

Group of orthologs #3240. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:178

F7A765              	100.00%		H3CMW0              	100.00%
                    	       		H3DJ68              	10.22%
Bootstrap support for F7A765 as seed ortholog is 100%.
Bootstrap support for H3CMW0 as seed ortholog is 100%.

Group of orthologs #3241. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F6RQZ5              	100.00%		H3C9V1              	100.00%
Bootstrap support for F6RQZ5 as seed ortholog is 100%.
Bootstrap support for H3C9V1 as seed ortholog is 100%.

Group of orthologs #3242. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:154

F6ZKV3              	100.00%		H3C6E2              	100.00%
Bootstrap support for F6ZKV3 as seed ortholog is 100%.
Bootstrap support for H3C6E2 as seed ortholog is 100%.

Group of orthologs #3243. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:30

H2XK36              	100.00%		H3BVP3              	100.00%
Bootstrap support for H2XK36 as seed ortholog is 100%.
Bootstrap support for H3BVP3 as seed ortholog is 99%.

Group of orthologs #3244. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:22

F6PR96              	100.00%		H3D6Q7              	100.00%
Bootstrap support for F6PR96 as seed ortholog is 100%.
Bootstrap support for H3D6Q7 as seed ortholog is 76%.

Group of orthologs #3245. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:173

F6Y1W8              	100.00%		H3CXM0              	100.00%
Bootstrap support for F6Y1W8 as seed ortholog is 100%.
Bootstrap support for H3CXM0 as seed ortholog is 100%.

Group of orthologs #3246. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 T.nigroviridis:46

F6YRX9              	100.00%		H3CYF6              	100.00%
Bootstrap support for F6YRX9 as seed ortholog is 89%.
Bootstrap support for H3CYF6 as seed ortholog is 92%.

Group of orthologs #3247. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

F7B2L3              	100.00%		H3D0G4              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for H3D0G4 as seed ortholog is 100%.

Group of orthologs #3248. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 T.nigroviridis:242

H2Y2A8              	100.00%		H3D074              	100.00%
Bootstrap support for H2Y2A8 as seed ortholog is 100%.
Bootstrap support for H3D074 as seed ortholog is 100%.

Group of orthologs #3249. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:58

F6WP72              	100.00%		H3DMI7              	100.00%
                    	       		H3CC10              	54.10%
                    	       		H3DBM5              	46.16%
Bootstrap support for F6WP72 as seed ortholog is 100%.
Bootstrap support for H3DMI7 as seed ortholog is 95%.

Group of orthologs #3250. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:138

F6RZD9              	100.00%		H3CMT1              	100.00%
F6SY55              	20.14%		
Bootstrap support for F6RZD9 as seed ortholog is 100%.
Bootstrap support for H3CMT1 as seed ortholog is 99%.

Group of orthologs #3251. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:95

F6X8W4              	100.00%		H3D2S0              	100.00%
                    	       		H3BZA7              	53.18%
Bootstrap support for F6X8W4 as seed ortholog is 99%.
Bootstrap support for H3D2S0 as seed ortholog is 98%.

Group of orthologs #3252. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:28

F6X4N7              	100.00%		H3DDR4              	100.00%
                    	       		H3C2H7              	37.92%
Bootstrap support for F6X4N7 as seed ortholog is 100%.
Bootstrap support for H3DDR4 as seed ortholog is 98%.

Group of orthologs #3253. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

F6WLK6              	100.00%		H3DQB3              	100.00%
                    	       		H3DHH2              	30.09%
Bootstrap support for F6WLK6 as seed ortholog is 100%.
Bootstrap support for H3DQB3 as seed ortholog is 100%.

Group of orthologs #3254. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

F6U397              	100.00%		H3CV81              	100.00%
Bootstrap support for F6U397 as seed ortholog is 100%.
Bootstrap support for H3CV81 as seed ortholog is 100%.

Group of orthologs #3255. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

F6V9A1              	100.00%		H3D293              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for H3D293 as seed ortholog is 100%.

Group of orthologs #3256. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:179

F7B7M7              	100.00%		H3D5W3              	100.00%
Bootstrap support for F7B7M7 as seed ortholog is 100%.
Bootstrap support for H3D5W3 as seed ortholog is 100%.

Group of orthologs #3257. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

H2XQU3              	100.00%		H3CWE2              	100.00%
Bootstrap support for H2XQU3 as seed ortholog is 100%.
Bootstrap support for H3CWE2 as seed ortholog is 100%.

Group of orthologs #3258. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

F6WX23              	100.00%		H3DP56              	100.00%
Bootstrap support for F6WX23 as seed ortholog is 100%.
Bootstrap support for H3DP56 as seed ortholog is 100%.

Group of orthologs #3259. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:17

H2XPS3              	100.00%		H3D6Z4              	100.00%
Bootstrap support for H2XPS3 as seed ortholog is 100%.
Bootstrap support for H3D6Z4 as seed ortholog is 69%.
Alternative seed ortholog is H3C3S4 (17 bits away from this cluster)

Group of orthologs #3260. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 T.nigroviridis:241

H2Y0I5              	100.00%		H3DCM6              	100.00%
Bootstrap support for H2Y0I5 as seed ortholog is 100%.
Bootstrap support for H3DCM6 as seed ortholog is 100%.

Group of orthologs #3261. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:240

H2XNI2              	100.00%		Q4T970              	100.00%
                    	       		H3BYT8              	47.93%
                    	       		Q4SH75              	35.54%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for Q4T970 as seed ortholog is 100%.

Group of orthologs #3262. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:148

F7AVM0              	100.00%		H3CMG4              	100.00%
                    	       		H3C6E3              	36.96%
Bootstrap support for F7AVM0 as seed ortholog is 100%.
Bootstrap support for H3CMG4 as seed ortholog is 99%.

Group of orthologs #3263. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:240

Q70VZ3              	100.00%		H3D0D7              	100.00%
                    	       		H3DDC5              	5.37%
Bootstrap support for Q70VZ3 as seed ortholog is 100%.
Bootstrap support for H3D0D7 as seed ortholog is 100%.

Group of orthologs #3264. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:240

F6WUG3              	100.00%		H3C0R0              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for H3C0R0 as seed ortholog is 100%.

Group of orthologs #3265. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:240

F6WUC3              	100.00%		H3C7M6              	100.00%
Bootstrap support for F6WUC3 as seed ortholog is 100%.
Bootstrap support for H3C7M6 as seed ortholog is 100%.

Group of orthologs #3266. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:160

F6T7Y6              	100.00%		H3CLY0              	100.00%
Bootstrap support for F6T7Y6 as seed ortholog is 100%.
Bootstrap support for H3CLY0 as seed ortholog is 100%.

Group of orthologs #3267. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:240

F6Q3E6              	100.00%		H3CW80              	100.00%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for H3CW80 as seed ortholog is 100%.

Group of orthologs #3268. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:240

H2XJU8              	100.00%		H3CEW2              	100.00%
Bootstrap support for H2XJU8 as seed ortholog is 100%.
Bootstrap support for H3CEW2 as seed ortholog is 100%.

Group of orthologs #3269. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 T.nigroviridis:240

F6V9K6              	100.00%		H3DCF7              	100.00%
Bootstrap support for F6V9K6 as seed ortholog is 82%.
Bootstrap support for H3DCF7 as seed ortholog is 100%.

Group of orthologs #3270. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:143

F6WW36              	100.00%		Q4RIV5              	100.00%
Bootstrap support for F6WW36 as seed ortholog is 97%.
Bootstrap support for Q4RIV5 as seed ortholog is 99%.

Group of orthologs #3271. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 T.nigroviridis:176

F7BEV9              	100.00%		H3DNB2              	100.00%
Bootstrap support for F7BEV9 as seed ortholog is 100%.
Bootstrap support for H3DNB2 as seed ortholog is 100%.

Group of orthologs #3272. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:108

F6VT42              	100.00%		H3CYE4              	100.00%
F6VT35              	10.76%		H3CBJ6              	15.54%
                    	       		Q4RNB0              	8.93%
Bootstrap support for F6VT42 as seed ortholog is 100%.
Bootstrap support for H3CYE4 as seed ortholog is 99%.

Group of orthologs #3273. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

H2XR37              	100.00%		H3DH45              	100.00%
                    	       		H3D453              	14.97%
                    	       		H3CS61              	9.82%
Bootstrap support for H2XR37 as seed ortholog is 100%.
Bootstrap support for H3DH45 as seed ortholog is 100%.

Group of orthologs #3274. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:121

F6RLX1              	100.00%		H3DDW0              	100.00%
                    	       		H3CBZ4              	10.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for H3DDW0 as seed ortholog is 100%.

Group of orthologs #3275. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

H2XPA7              	100.00%		H3DGE5              	100.00%
                    	       		H3DM24              	43.19%
Bootstrap support for H2XPA7 as seed ortholog is 100%.
Bootstrap support for H3DGE5 as seed ortholog is 100%.

Group of orthologs #3276. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F6PXX9              	100.00%		H3BY36              	100.00%
Bootstrap support for F6PXX9 as seed ortholog is 100%.
Bootstrap support for H3BY36 as seed ortholog is 100%.

Group of orthologs #3277. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:148

F6PJV8              	100.00%		H3CIU0              	100.00%
Bootstrap support for F6PJV8 as seed ortholog is 99%.
Bootstrap support for H3CIU0 as seed ortholog is 100%.

Group of orthologs #3278. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F6ZLT0              	100.00%		H3C6W0              	100.00%
Bootstrap support for F6ZLT0 as seed ortholog is 100%.
Bootstrap support for H3C6W0 as seed ortholog is 100%.

Group of orthologs #3279. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:153

F6U5L2              	100.00%		H3D2J5              	100.00%
Bootstrap support for F6U5L2 as seed ortholog is 100%.
Bootstrap support for H3D2J5 as seed ortholog is 99%.

Group of orthologs #3280. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F6YVR5              	100.00%		H3CPD0              	100.00%
Bootstrap support for F6YVR5 as seed ortholog is 100%.
Bootstrap support for H3CPD0 as seed ortholog is 100%.

Group of orthologs #3281. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F6QJB5              	100.00%		H3DN64              	100.00%
Bootstrap support for F6QJB5 as seed ortholog is 100%.
Bootstrap support for H3DN64 as seed ortholog is 100%.

Group of orthologs #3282. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:69

F7AAH4              	100.00%		H3D918              	100.00%
Bootstrap support for F7AAH4 as seed ortholog is 100%.
Bootstrap support for H3D918 as seed ortholog is 99%.

Group of orthologs #3283. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F6VKZ4              	100.00%		Q4RG89              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for Q4RG89 as seed ortholog is 100%.

Group of orthologs #3284. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

H2XXH1              	100.00%		H3D535              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for H3D535 as seed ortholog is 100%.

Group of orthologs #3285. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F7AT36              	100.00%		Q4RWW0              	100.00%
Bootstrap support for F7AT36 as seed ortholog is 100%.
Bootstrap support for Q4RWW0 as seed ortholog is 100%.

Group of orthologs #3286. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 T.nigroviridis:239

F7AX45              	100.00%		Q4S7A1              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for Q4S7A1 as seed ortholog is 100%.

Group of orthologs #3287. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

F6RMW3              	100.00%		H3BX76              	100.00%
                    	       		H3DHN4              	55.23%
                    	       		H3D6U9              	44.77%
                    	       		H3CIP6              	33.57%
                    	       		H3CB38              	12.64%
                    	       		H3DEA4              	6.86%
Bootstrap support for F6RMW3 as seed ortholog is 100%.
Bootstrap support for H3BX76 as seed ortholog is 100%.

Group of orthologs #3288. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

F6VQB3              	100.00%		Q4RXT5              	100.00%
                    	       		H3DBV9              	65.16%
                    	       		Q4TDC5              	10.10%
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for Q4RXT5 as seed ortholog is 100%.

Group of orthologs #3289. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:59

H2XMV3              	100.00%		H3DAT9              	100.00%
                    	       		H3DMC2              	9.32%
                    	       		H3BY65              	6.43%
Bootstrap support for H2XMV3 as seed ortholog is 99%.
Bootstrap support for H3DAT9 as seed ortholog is 95%.

Group of orthologs #3290. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

F6VI59              	100.00%		H3C7I6              	100.00%
                    	       		H3C8T1              	15.38%
Bootstrap support for F6VI59 as seed ortholog is 100%.
Bootstrap support for H3C7I6 as seed ortholog is 100%.

Group of orthologs #3291. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

F6VXD9              	100.00%		H3DFM4              	100.00%
                    	       		H3C3K4              	21.28%
Bootstrap support for F6VXD9 as seed ortholog is 100%.
Bootstrap support for H3DFM4 as seed ortholog is 100%.

Group of orthologs #3292. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

F6X915              	100.00%		H3DCX1              	100.00%
                    	       		H3CYF3              	35.94%
Bootstrap support for F6X915 as seed ortholog is 100%.
Bootstrap support for H3DCX1 as seed ortholog is 100%.

Group of orthologs #3293. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

H2XME2              	100.00%		H3CTX0              	100.00%
                    	       		Q4SK88              	100.00%
Bootstrap support for H2XME2 as seed ortholog is 100%.
Bootstrap support for H3CTX0 as seed ortholog is 100%.
Bootstrap support for Q4SK88 as seed ortholog is 100%.

Group of orthologs #3294. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:81

F6UWQ4              	100.00%		H3CNT6              	100.00%
Bootstrap support for F6UWQ4 as seed ortholog is 99%.
Bootstrap support for H3CNT6 as seed ortholog is 98%.

Group of orthologs #3295. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

F6SPW4              	100.00%		H3CVY0              	100.00%
Bootstrap support for F6SPW4 as seed ortholog is 100%.
Bootstrap support for H3CVY0 as seed ortholog is 100%.

Group of orthologs #3296. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

H2Y1M1              	100.00%		H3CCD9              	100.00%
Bootstrap support for H2Y1M1 as seed ortholog is 100%.
Bootstrap support for H3CCD9 as seed ortholog is 100%.

Group of orthologs #3297. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

H2Y0N2              	100.00%		H3CRL2              	100.00%
Bootstrap support for H2Y0N2 as seed ortholog is 100%.
Bootstrap support for H3CRL2 as seed ortholog is 100%.

Group of orthologs #3298. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:238

H2XYS7              	100.00%		H3D7A8              	100.00%
Bootstrap support for H2XYS7 as seed ortholog is 100%.
Bootstrap support for H3D7A8 as seed ortholog is 100%.

Group of orthologs #3299. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 T.nigroviridis:156

Q8HIN2              	100.00%		Q4JQI7              	100.00%
Bootstrap support for Q8HIN2 as seed ortholog is 100%.
Bootstrap support for Q4JQI7 as seed ortholog is 100%.

Group of orthologs #3300. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:29

F6VZA9              	100.00%		H3D8S2              	100.00%
F6SJY8              	30.23%		
Bootstrap support for F6VZA9 as seed ortholog is 100%.
Bootstrap support for H3D8S2 as seed ortholog is 76%.

Group of orthologs #3301. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:237

F6SSS9              	100.00%		H3CTJ8              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for H3CTJ8 as seed ortholog is 100%.

Group of orthologs #3302. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:237

F6Z3Y4              	100.00%		H3CBB5              	100.00%
Bootstrap support for F6Z3Y4 as seed ortholog is 100%.
Bootstrap support for H3CBB5 as seed ortholog is 100%.

Group of orthologs #3303. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:143

F6TBV6              	100.00%		H3D3M5              	100.00%
Bootstrap support for F6TBV6 as seed ortholog is 100%.
Bootstrap support for H3D3M5 as seed ortholog is 99%.

Group of orthologs #3304. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:237

F7B4B8              	100.00%		H3CEB9              	100.00%
Bootstrap support for F7B4B8 as seed ortholog is 100%.
Bootstrap support for H3CEB9 as seed ortholog is 100%.

Group of orthologs #3305. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:69

F7BAU4              	100.00%		H3CJ32              	100.00%
Bootstrap support for F7BAU4 as seed ortholog is 97%.
Bootstrap support for H3CJ32 as seed ortholog is 96%.

Group of orthologs #3306. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:237

F6ZE91              	100.00%		H3D2X1              	100.00%
Bootstrap support for F6ZE91 as seed ortholog is 100%.
Bootstrap support for H3D2X1 as seed ortholog is 100%.

Group of orthologs #3307. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:237

F7ATQ3              	100.00%		H3D095              	100.00%
Bootstrap support for F7ATQ3 as seed ortholog is 100%.
Bootstrap support for H3D095 as seed ortholog is 100%.

Group of orthologs #3308. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:62

H2XLN9              	100.00%		H3CWF4              	100.00%
Bootstrap support for H2XLN9 as seed ortholog is 100%.
Bootstrap support for H3CWF4 as seed ortholog is 99%.

Group of orthologs #3309. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 T.nigroviridis:237

F7BMD5              	100.00%		Q4SEE5              	100.00%
Bootstrap support for F7BMD5 as seed ortholog is 100%.
Bootstrap support for Q4SEE5 as seed ortholog is 100%.

Group of orthologs #3310. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:60

F7A9Q6              	100.00%		H3D0E0              	100.00%
                    	       		H3CVZ7              	29.15%
                    	       		H3CIS4              	6.44%
Bootstrap support for F7A9Q6 as seed ortholog is 99%.
Bootstrap support for H3D0E0 as seed ortholog is 53%.
Alternative seed ortholog is H3CB90 (60 bits away from this cluster)

Group of orthologs #3311. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 T.nigroviridis:236

F6TCH6              	100.00%		H3CCJ2              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for H3CCJ2 as seed ortholog is 100%.

Group of orthologs #3312. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 T.nigroviridis:184

F6XJ18              	100.00%		H3CUX1              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for H3CUX1 as seed ortholog is 100%.

Group of orthologs #3313. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 T.nigroviridis:236

F6ZJ82              	100.00%		H3CS67              	100.00%
Bootstrap support for F6ZJ82 as seed ortholog is 100%.
Bootstrap support for H3CS67 as seed ortholog is 100%.

Group of orthologs #3314. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 T.nigroviridis:236

F6W2W3              	100.00%		H3D525              	100.00%
Bootstrap support for F6W2W3 as seed ortholog is 100%.
Bootstrap support for H3D525 as seed ortholog is 100%.

Group of orthologs #3315. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:182

F7B6C9              	100.00%		H3DJM5              	100.00%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for H3DJM5 as seed ortholog is 100%.

Group of orthologs #3316. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 T.nigroviridis:236

Q4H2Q4              	100.00%		H3CUU0              	100.00%
Bootstrap support for Q4H2Q4 as seed ortholog is 100%.
Bootstrap support for H3CUU0 as seed ortholog is 100%.

Group of orthologs #3317. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

H2Y3S7              	100.00%		H3CFG3              	100.00%
                    	       		H3CZ95              	21.29%
                    	       		H3DIJ6              	17.31%
                    	       		H3DPI8              	9.95%
Bootstrap support for H2Y3S7 as seed ortholog is 100%.
Bootstrap support for H3CFG3 as seed ortholog is 100%.

Group of orthologs #3318. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

F7A2P1              	100.00%		H3DGX5              	100.00%
                    	       		H3CQP2              	9.63%
                    	       		H3CAY9              	8.06%
Bootstrap support for F7A2P1 as seed ortholog is 100%.
Bootstrap support for H3DGX5 as seed ortholog is 100%.

Group of orthologs #3319. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:102

F6WDK3              	100.00%		H3CNA8              	100.00%
                    	       		H3DJP2              	12.12%
Bootstrap support for F6WDK3 as seed ortholog is 100%.
Bootstrap support for H3CNA8 as seed ortholog is 99%.

Group of orthologs #3320. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

H2XS31              	100.00%		H3CSR8              	100.00%
H2XZZ2              	100.00%		
Bootstrap support for H2XS31 as seed ortholog is 100%.
Bootstrap support for H2XZZ2 as seed ortholog is 100%.
Bootstrap support for H3CSR8 as seed ortholog is 100%.

Group of orthologs #3321. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

H2XX58              	100.00%		H3D2T6              	100.00%
                    	       		H3DKU7              	11.11%
Bootstrap support for H2XX58 as seed ortholog is 100%.
Bootstrap support for H3D2T6 as seed ortholog is 100%.

Group of orthologs #3322. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:28

F6RQT3              	100.00%		H3CAX3              	100.00%
Bootstrap support for F6RQT3 as seed ortholog is 100%.
Bootstrap support for H3CAX3 as seed ortholog is 84%.

Group of orthologs #3323. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:159

F6YVE9              	100.00%		H3C3F8              	100.00%
Bootstrap support for F6YVE9 as seed ortholog is 100%.
Bootstrap support for H3C3F8 as seed ortholog is 100%.

Group of orthologs #3324. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:77

F6UTK0              	100.00%		H3CIH4              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 100%.
Bootstrap support for H3CIH4 as seed ortholog is 99%.

Group of orthologs #3325. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

F6W2K0              	100.00%		H3CKG5              	100.00%
Bootstrap support for F6W2K0 as seed ortholog is 100%.
Bootstrap support for H3CKG5 as seed ortholog is 100%.

Group of orthologs #3326. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

F6XG50              	100.00%		H3CT44              	100.00%
Bootstrap support for F6XG50 as seed ortholog is 100%.
Bootstrap support for H3CT44 as seed ortholog is 100%.

Group of orthologs #3327. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

F6WRR9              	100.00%		H3D0D5              	100.00%
Bootstrap support for F6WRR9 as seed ortholog is 100%.
Bootstrap support for H3D0D5 as seed ortholog is 100%.

Group of orthologs #3328. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

H2XPV5              	100.00%		H3CC67              	100.00%
Bootstrap support for H2XPV5 as seed ortholog is 100%.
Bootstrap support for H3CC67 as seed ortholog is 100%.

Group of orthologs #3329. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:183

F7AWW1              	100.00%		H3D296              	100.00%
Bootstrap support for F7AWW1 as seed ortholog is 100%.
Bootstrap support for H3D296 as seed ortholog is 100%.

Group of orthologs #3330. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

F6Z4B6              	100.00%		H3D9K6              	100.00%
Bootstrap support for F6Z4B6 as seed ortholog is 100%.
Bootstrap support for H3D9K6 as seed ortholog is 100%.

Group of orthologs #3331. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:235

H2Y233              	100.00%		H3CKN0              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 100%.
Bootstrap support for H3CKN0 as seed ortholog is 100%.

Group of orthologs #3332. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:111

H2Y2D1              	100.00%		H3CSM0              	100.00%
Bootstrap support for H2Y2D1 as seed ortholog is 100%.
Bootstrap support for H3CSM0 as seed ortholog is 99%.

Group of orthologs #3333. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 T.nigroviridis:235

H2XZ76              	100.00%		Q4S2N7              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for Q4S2N7 as seed ortholog is 100%.

Group of orthologs #3334. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:123

F6VY95              	100.00%		H3CR07              	100.00%
F6R7P6              	100.00%		H3CR06              	100.00%
H2XN55              	40.89%		
Bootstrap support for F6VY95 as seed ortholog is 99%.
Bootstrap support for F6R7P6 as seed ortholog is 98%.
Bootstrap support for H3CR07 as seed ortholog is 99%.
Bootstrap support for H3CR06 as seed ortholog is 99%.

Group of orthologs #3335. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:47

H2Y054              	100.00%		H3D201              	100.00%
                    	       		H3D200              	23.53%
                    	       		H3CWK8              	17.65%
Bootstrap support for H2Y054 as seed ortholog is 98%.
Bootstrap support for H3D201 as seed ortholog is 96%.

Group of orthologs #3336. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 T.nigroviridis:76

Q4H2U5              	100.00%		H3CTE5              	100.00%
                    	       		H3DNE8              	33.49%
Bootstrap support for Q4H2U5 as seed ortholog is 100%.
Bootstrap support for H3CTE5 as seed ortholog is 95%.

Group of orthologs #3337. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 T.nigroviridis:47

F6XI97              	100.00%		H3C4E1              	100.00%
Bootstrap support for F6XI97 as seed ortholog is 100%.
Bootstrap support for H3C4E1 as seed ortholog is 90%.

Group of orthologs #3338. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 T.nigroviridis:234

H2XTW6              	100.00%		H3CMD4              	100.00%
Bootstrap support for H2XTW6 as seed ortholog is 100%.
Bootstrap support for H3CMD4 as seed ortholog is 100%.

Group of orthologs #3339. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 T.nigroviridis:187

H2XJN3              	100.00%		H3D5A7              	100.00%
Bootstrap support for H2XJN3 as seed ortholog is 100%.
Bootstrap support for H3D5A7 as seed ortholog is 100%.

Group of orthologs #3340. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

F6RNX9              	100.00%		H3DEY4              	100.00%
                    	       		H3CPH6              	30.60%
Bootstrap support for F6RNX9 as seed ortholog is 100%.
Bootstrap support for H3DEY4 as seed ortholog is 100%.

Group of orthologs #3341. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

F6TZC4              	100.00%		H3D6H6              	100.00%
Bootstrap support for F6TZC4 as seed ortholog is 100%.
Bootstrap support for H3D6H6 as seed ortholog is 100%.

Group of orthologs #3342. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

F7BN93              	100.00%		H3CJ60              	100.00%
Bootstrap support for F7BN93 as seed ortholog is 100%.
Bootstrap support for H3CJ60 as seed ortholog is 100%.

Group of orthologs #3343. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

F7BPM3              	100.00%		H3CJ87              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 100%.
Bootstrap support for H3CJ87 as seed ortholog is 100%.

Group of orthologs #3344. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

F6Q9P1              	100.00%		Q4SDG2              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for Q4SDG2 as seed ortholog is 100%.

Group of orthologs #3345. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

H2XWF6              	100.00%		H3CDR4              	100.00%
Bootstrap support for H2XWF6 as seed ortholog is 100%.
Bootstrap support for H3CDR4 as seed ortholog is 100%.

Group of orthologs #3346. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

F6ZBX8              	100.00%		H3DAE7              	100.00%
Bootstrap support for F6ZBX8 as seed ortholog is 100%.
Bootstrap support for H3DAE7 as seed ortholog is 100%.

Group of orthologs #3347. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:165

F6VN10              	100.00%		Q4RGS6              	100.00%
Bootstrap support for F6VN10 as seed ortholog is 100%.
Bootstrap support for Q4RGS6 as seed ortholog is 100%.

Group of orthologs #3348. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 T.nigroviridis:233

H2Y0K3              	100.00%		H3DAF8              	100.00%
Bootstrap support for H2Y0K3 as seed ortholog is 100%.
Bootstrap support for H3DAF8 as seed ortholog is 100%.

Group of orthologs #3349. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:21

F6UWG2              	100.00%		H3CWC2              	72.93%
F6WT44              	100.00%		H3CWC1              	100.00%
F6VJ33              	46.45%		H3CCV1              	28.49%
F7BHL3              	10.64%		H3BVZ6              	28.21%
Bootstrap support for F6UWG2 as seed ortholog is 98%.
Bootstrap support for F6WT44 as seed ortholog is 99%.
Bootstrap support for H3CWC1 as seed ortholog is 74%.
Alternative seed ortholog is H3C511 (21 bits away from this cluster)

Group of orthologs #3350. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:81

F6V8I4              	100.00%		H3CZL0              	100.00%
                    	       		H3D181              	41.15%
                    	       		H3DGH1              	19.62%
                    	       		H3DH23              	6.22%
Bootstrap support for F6V8I4 as seed ortholog is 99%.
Bootstrap support for H3CZL0 as seed ortholog is 99%.

Group of orthologs #3351. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:232

H2XWZ6              	100.00%		Q7ZSZ8              	100.00%
                    	       		Q4RNW1              	21.15%
Bootstrap support for H2XWZ6 as seed ortholog is 100%.
Bootstrap support for Q7ZSZ8 as seed ortholog is 100%.

Group of orthologs #3352. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:232

F6TZK8              	100.00%		H3C9V9              	100.00%
Bootstrap support for F6TZK8 as seed ortholog is 100%.
Bootstrap support for H3C9V9 as seed ortholog is 100%.

Group of orthologs #3353. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:232

F6U095              	100.00%		H3CSD3              	100.00%
Bootstrap support for F6U095 as seed ortholog is 100%.
Bootstrap support for H3CSD3 as seed ortholog is 100%.

Group of orthologs #3354. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:232

F6ZSB0              	100.00%		H3CCX0              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for H3CCX0 as seed ortholog is 100%.

Group of orthologs #3355. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:232

F6QJH8              	100.00%		H3DEG6              	100.00%
Bootstrap support for F6QJH8 as seed ortholog is 100%.
Bootstrap support for H3DEG6 as seed ortholog is 100%.

Group of orthologs #3356. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 T.nigroviridis:232

F6V1A9              	100.00%		H3D8G4              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for H3D8G4 as seed ortholog is 100%.

Group of orthologs #3357. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:113

F6ZJ18              	100.00%		H3CGM3              	100.00%
                    	       		H3D8Y6              	31.10%
                    	       		H3DE57              	27.81%
                    	       		H3CVM1              	25.92%
                    	       		H3BXC5              	13.78%
Bootstrap support for F6ZJ18 as seed ortholog is 99%.
Bootstrap support for H3CGM3 as seed ortholog is 99%.

Group of orthologs #3358. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:99

F6WBC7              	100.00%		Q4SIK5              	100.00%
                    	       		H3CS20              	30.50%
                    	       		H3CSY3              	22.87%
Bootstrap support for F6WBC7 as seed ortholog is 100%.
Bootstrap support for Q4SIK5 as seed ortholog is 100%.

Group of orthologs #3359. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:143

F6ZS71              	100.00%		H3D7S3              	100.00%
F6VQC2              	62.75%		
Bootstrap support for F6ZS71 as seed ortholog is 100%.
Bootstrap support for H3D7S3 as seed ortholog is 100%.

Group of orthologs #3360. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:231

F6QIV0              	100.00%		H3DHA5              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for H3DHA5 as seed ortholog is 100%.

Group of orthologs #3361. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:231

F6VPZ1              	100.00%		H3DBJ6              	100.00%
Bootstrap support for F6VPZ1 as seed ortholog is 100%.
Bootstrap support for H3DBJ6 as seed ortholog is 100%.

Group of orthologs #3362. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:231

F6WZJ4              	100.00%		H3D868              	100.00%
Bootstrap support for F6WZJ4 as seed ortholog is 100%.
Bootstrap support for H3D868 as seed ortholog is 100%.

Group of orthologs #3363. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 T.nigroviridis:231

F6YP38              	100.00%		H3DND3              	100.00%
Bootstrap support for F6YP38 as seed ortholog is 100%.
Bootstrap support for H3DND3 as seed ortholog is 100%.

Group of orthologs #3364. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:230

F6XWK4              	100.00%		H3D437              	100.00%
                    	       		H3CIN0              	29.50%
Bootstrap support for F6XWK4 as seed ortholog is 100%.
Bootstrap support for H3D437 as seed ortholog is 100%.

Group of orthologs #3365. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:230

H2XJL8              	100.00%		H3D0R0              	100.00%
                    	       		H3BYT7              	7.26%
Bootstrap support for H2XJL8 as seed ortholog is 100%.
Bootstrap support for H3D0R0 as seed ortholog is 100%.

Group of orthologs #3366. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:230

F6W804              	100.00%		Q4RMK4              	100.00%
F6Q9F4              	6.63%		
Bootstrap support for F6W804 as seed ortholog is 100%.
Bootstrap support for Q4RMK4 as seed ortholog is 100%.

Group of orthologs #3367. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:230

F6TX13              	100.00%		H3CJM7              	100.00%
Bootstrap support for F6TX13 as seed ortholog is 100%.
Bootstrap support for H3CJM7 as seed ortholog is 100%.

Group of orthologs #3368. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:10

F6Q196              	100.00%		H3D6H2              	100.00%
Bootstrap support for F6Q196 as seed ortholog is 98%.
Bootstrap support for H3D6H2 as seed ortholog is 56%.
Alternative seed ortholog is H3CN19 (10 bits away from this cluster)

Group of orthologs #3369. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:230

F6RXW9              	100.00%		H3D1Z3              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for H3D1Z3 as seed ortholog is 100%.

Group of orthologs #3370. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 T.nigroviridis:230

F6SNU1              	100.00%		Q4S563              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for Q4S563 as seed ortholog is 100%.

Group of orthologs #3371. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:121

F6XU21              	100.00%		Q4SR34              	100.00%
                    	       		Q4RY04              	69.81%
                    	       		H3DMF0              	36.89%
                    	       		H3BXA9              	34.90%
                    	       		H3CPB4              	22.50%
Bootstrap support for F6XU21 as seed ortholog is 99%.
Bootstrap support for Q4SR34 as seed ortholog is 99%.

Group of orthologs #3372. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 T.nigroviridis:229

F6RT01              	100.00%		H3BW67              	100.00%
Bootstrap support for F6RT01 as seed ortholog is 100%.
Bootstrap support for H3BW67 as seed ortholog is 100%.

Group of orthologs #3373. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:100

H2XVE0              	100.00%		H3BY84              	100.00%
Bootstrap support for H2XVE0 as seed ortholog is 100%.
Bootstrap support for H3BY84 as seed ortholog is 99%.

Group of orthologs #3374. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:229

F6V3K9              	100.00%		H3D8V2              	100.00%
Bootstrap support for F6V3K9 as seed ortholog is 99%.
Bootstrap support for H3D8V2 as seed ortholog is 100%.

Group of orthologs #3375. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 T.nigroviridis:229

F6Z8N3              	100.00%		H3D7D5              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for H3D7D5 as seed ortholog is 100%.

Group of orthologs #3376. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:176

F6WMA6              	100.00%		Q4RPT7              	100.00%
Bootstrap support for F6WMA6 as seed ortholog is 100%.
Bootstrap support for Q4RPT7 as seed ortholog is 100%.

Group of orthologs #3377. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 T.nigroviridis:229

F7AYB2              	100.00%		Q4S7R6              	100.00%
Bootstrap support for F7AYB2 as seed ortholog is 100%.
Bootstrap support for Q4S7R6 as seed ortholog is 100%.

Group of orthologs #3378. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 T.nigroviridis:229

H2XLH0              	100.00%		Q4SB31              	100.00%
Bootstrap support for H2XLH0 as seed ortholog is 100%.
Bootstrap support for Q4SB31 as seed ortholog is 100%.

Group of orthologs #3379. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 T.nigroviridis:228

F6VY63              	100.00%		H3CB20              	100.00%
Bootstrap support for F6VY63 as seed ortholog is 100%.
Bootstrap support for H3CB20 as seed ortholog is 100%.

Group of orthologs #3380. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 T.nigroviridis:228

F6XS68              	100.00%		H3DGL5              	100.00%
Bootstrap support for F6XS68 as seed ortholog is 100%.
Bootstrap support for H3DGL5 as seed ortholog is 100%.

Group of orthologs #3381. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 T.nigroviridis:228

F7A2I6              	100.00%		H3DBJ3              	100.00%
Bootstrap support for F7A2I6 as seed ortholog is 100%.
Bootstrap support for H3DBJ3 as seed ortholog is 100%.

Group of orthologs #3382. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:122

B5UA19              	100.00%		H3CMN0              	100.00%
                    	       		H3DAW1              	23.73%
                    	       		H3CPI6              	12.44%
                    	       		H3C519              	7.86%
Bootstrap support for B5UA19 as seed ortholog is 99%.
Bootstrap support for H3CMN0 as seed ortholog is 99%.

Group of orthologs #3383. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:227

F6Q4W5              	100.00%		H3DDE9              	100.00%
                    	       		H3DDE8              	32.35%
                    	       		H3DET9              	26.57%
                    	       		H3CVB5              	24.85%
Bootstrap support for F6Q4W5 as seed ortholog is 100%.
Bootstrap support for H3DDE9 as seed ortholog is 100%.

Group of orthologs #3384. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:227

Q70W02              	100.00%		H3CPN6              	100.00%
                    	       		H3CZS1              	23.90%
                    	       		H3CWK9              	22.18%
                    	       		Q6IZ48              	22.18%
Bootstrap support for Q70W02 as seed ortholog is 100%.
Bootstrap support for H3CPN6 as seed ortholog is 100%.

Group of orthologs #3385. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 T.nigroviridis:25

F6TWK8              	100.00%		H3D5C2              	100.00%
                    	       		H3D6V8              	42.01%
Bootstrap support for F6TWK8 as seed ortholog is 81%.
Bootstrap support for H3D5C2 as seed ortholog is 74%.
Alternative seed ortholog is H3D0N1 (25 bits away from this cluster)

Group of orthologs #3386. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:227

F6WZS8              	100.00%		H3CP27              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for H3CP27 as seed ortholog is 100%.

Group of orthologs #3387. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:173

F6X6H9              	100.00%		H3CPU9              	100.00%
Bootstrap support for F6X6H9 as seed ortholog is 100%.
Bootstrap support for H3CPU9 as seed ortholog is 100%.

Group of orthologs #3388. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:12

F6VV86              	100.00%		H3D5Y6              	100.00%
Bootstrap support for F6VV86 as seed ortholog is 100%.
Bootstrap support for H3D5Y6 as seed ortholog is 65%.
Alternative seed ortholog is H3DR65 (12 bits away from this cluster)

Group of orthologs #3389. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:227

F6WWT1              	100.00%		H3D386              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for H3D386 as seed ortholog is 100%.

Group of orthologs #3390. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:227

F6TQ55              	100.00%		H3DFF8              	100.00%
Bootstrap support for F6TQ55 as seed ortholog is 100%.
Bootstrap support for H3DFF8 as seed ortholog is 100%.

Group of orthologs #3391. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 T.nigroviridis:148

F7AI19              	100.00%		H3CZ08              	100.00%
Bootstrap support for F7AI19 as seed ortholog is 70%.
Alternative seed ortholog is F6ZCT8 (24 bits away from this cluster)
Bootstrap support for H3CZ08 as seed ortholog is 100%.

Group of orthologs #3392. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 T.nigroviridis:227

F6ZBK7              	100.00%		H3DHC1              	100.00%
Bootstrap support for F6ZBK7 as seed ortholog is 100%.
Bootstrap support for H3DHC1 as seed ortholog is 100%.

Group of orthologs #3393. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:145

H2XWT2              	100.00%		H3DC36              	100.00%
Bootstrap support for H2XWT2 as seed ortholog is 100%.
Bootstrap support for H3DC36 as seed ortholog is 100%.

Group of orthologs #3394. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:140

F6X134              	100.00%		H3BZN4              	100.00%
                    	       		H3CQ29              	39.89%
Bootstrap support for F6X134 as seed ortholog is 100%.
Bootstrap support for H3BZN4 as seed ortholog is 100%.

Group of orthologs #3395. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:160

F7AKT1              	100.00%		H3DLJ4              	100.00%
                    	       		H3D410              	21.00%
Bootstrap support for F7AKT1 as seed ortholog is 100%.
Bootstrap support for H3DLJ4 as seed ortholog is 100%.

Group of orthologs #3396. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:226

F7BK34              	100.00%		H3CDA1              	100.00%
Bootstrap support for F7BK34 as seed ortholog is 100%.
Bootstrap support for H3CDA1 as seed ortholog is 100%.

Group of orthologs #3397. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:176

F6TCF8              	100.00%		H3DD58              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for H3DD58 as seed ortholog is 100%.

Group of orthologs #3398. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:226

F6XIG6              	100.00%		H3D0V9              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for H3D0V9 as seed ortholog is 100%.

Group of orthologs #3399. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:226

F6WCB0              	100.00%		H3D7E8              	100.00%
Bootstrap support for F6WCB0 as seed ortholog is 100%.
Bootstrap support for H3D7E8 as seed ortholog is 100%.

Group of orthologs #3400. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:226

F6Y011              	100.00%		Q4SVB8              	100.00%
Bootstrap support for F6Y011 as seed ortholog is 100%.
Bootstrap support for Q4SVB8 as seed ortholog is 100%.

Group of orthologs #3401. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 T.nigroviridis:226

Q1RL33              	100.00%		H3CUE7              	100.00%
Bootstrap support for Q1RL33 as seed ortholog is 100%.
Bootstrap support for H3CUE7 as seed ortholog is 100%.

Group of orthologs #3402. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:170

F6SJE3              	100.00%		H3C9W7              	100.00%
                    	       		H3CLQ0              	19.27%
Bootstrap support for F6SJE3 as seed ortholog is 100%.
Bootstrap support for H3C9W7 as seed ortholog is 100%.

Group of orthologs #3403. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:8

F7BBQ5              	100.00%		H3CBV8              	100.00%
F6YB01              	21.62%		
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for H3CBV8 as seed ortholog is 67%.
Alternative seed ortholog is H3D1Z0 (8 bits away from this cluster)

Group of orthologs #3404. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:117

F6TX70              	100.00%		H3DBT2              	100.00%
F6TX66              	62.35%		
Bootstrap support for F6TX70 as seed ortholog is 100%.
Bootstrap support for H3DBT2 as seed ortholog is 99%.

Group of orthologs #3405. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:225

F6SCR3              	100.00%		H3BYV1              	100.00%
Bootstrap support for F6SCR3 as seed ortholog is 100%.
Bootstrap support for H3BYV1 as seed ortholog is 100%.

Group of orthologs #3406. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:225

F6QNA6              	100.00%		H3CTD9              	100.00%
Bootstrap support for F6QNA6 as seed ortholog is 100%.
Bootstrap support for H3CTD9 as seed ortholog is 100%.

Group of orthologs #3407. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:225

F6UW27              	100.00%		H3CNS7              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for H3CNS7 as seed ortholog is 100%.

Group of orthologs #3408. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:127

F7A1W8              	100.00%		H3CC02              	100.00%
Bootstrap support for F7A1W8 as seed ortholog is 100%.
Bootstrap support for H3CC02 as seed ortholog is 100%.

Group of orthologs #3409. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:127

F6XDJ2              	100.00%		H3D314              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 99%.
Bootstrap support for H3D314 as seed ortholog is 99%.

Group of orthologs #3410. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:225

H2XNT5              	100.00%		H3CS83              	100.00%
Bootstrap support for H2XNT5 as seed ortholog is 100%.
Bootstrap support for H3CS83 as seed ortholog is 100%.

Group of orthologs #3411. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:225

F6WTN6              	100.00%		Q4SFY4              	100.00%
Bootstrap support for F6WTN6 as seed ortholog is 100%.
Bootstrap support for Q4SFY4 as seed ortholog is 100%.

Group of orthologs #3412. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 T.nigroviridis:225

F6YBU7              	100.00%		Q4SZY2              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for Q4SZY2 as seed ortholog is 100%.

Group of orthologs #3413. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:115

H2Y1V5              	100.00%		H3DPV7              	100.00%
Bootstrap support for H2Y1V5 as seed ortholog is 100%.
Bootstrap support for H3DPV7 as seed ortholog is 99%.

Group of orthologs #3414. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:179

F6Q8X5              	100.00%		H3CJY8              	100.00%
                    	       		H3DC69              	30.33%
                    	       		H3BXT3              	27.18%
Bootstrap support for F6Q8X5 as seed ortholog is 100%.
Bootstrap support for H3CJY8 as seed ortholog is 100%.

Group of orthologs #3415. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:224

F6VE75              	100.00%		H3DFE8              	100.00%
                    	       		H3DGH7              	15.66%
Bootstrap support for F6VE75 as seed ortholog is 100%.
Bootstrap support for H3DFE8 as seed ortholog is 100%.

Group of orthologs #3416. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:224

F6Y110              	100.00%		H3BYX1              	100.00%
Bootstrap support for F6Y110 as seed ortholog is 100%.
Bootstrap support for H3BYX1 as seed ortholog is 100%.

Group of orthologs #3417. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:224

F6SVM4              	100.00%		H3CM29              	100.00%
Bootstrap support for F6SVM4 as seed ortholog is 100%.
Bootstrap support for H3CM29 as seed ortholog is 100%.

Group of orthologs #3418. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:43

F6TSS8              	100.00%		H3CP29              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for H3CP29 as seed ortholog is 93%.

Group of orthologs #3419. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:224

F6ZWX3              	100.00%		H3CWJ2              	100.00%
Bootstrap support for F6ZWX3 as seed ortholog is 100%.
Bootstrap support for H3CWJ2 as seed ortholog is 100%.

Group of orthologs #3420. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:224

F6ZAE1              	100.00%		H3D0Y6              	100.00%
Bootstrap support for F6ZAE1 as seed ortholog is 100%.
Bootstrap support for H3D0Y6 as seed ortholog is 100%.

Group of orthologs #3421. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:18

F6WUA7              	100.00%		H3DL98              	100.00%
Bootstrap support for F6WUA7 as seed ortholog is 100%.
Bootstrap support for H3DL98 as seed ortholog is 41%.
Alternative seed ortholog is H3DG98 (18 bits away from this cluster)

Group of orthologs #3422. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 T.nigroviridis:224

F6ZE98              	100.00%		Q4SS66              	100.00%
Bootstrap support for F6ZE98 as seed ortholog is 100%.
Bootstrap support for Q4SS66 as seed ortholog is 100%.

Group of orthologs #3423. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:48

F6PHL6              	100.00%		H3CUF8              	100.00%
H2XMP2              	100.00%		H3DA70              	100.00%
Bootstrap support for F6PHL6 as seed ortholog is 100%.
Bootstrap support for H2XMP2 as seed ortholog is 100%.
Bootstrap support for H3CUF8 as seed ortholog is 90%.
Bootstrap support for H3DA70 as seed ortholog is 84%.

Group of orthologs #3424. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:223

F6YD46              	100.00%		H3CPF1              	100.00%
F6T569              	38.34%		
F6WGU2              	25.15%		
Bootstrap support for F6YD46 as seed ortholog is 99%.
Bootstrap support for H3CPF1 as seed ortholog is 100%.

Group of orthologs #3425. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:223

F6T9U4              	100.00%		H3DBL7              	100.00%
                    	       		H3DLN7              	23.03%
Bootstrap support for F6T9U4 as seed ortholog is 100%.
Bootstrap support for H3DBL7 as seed ortholog is 100%.

Group of orthologs #3426. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 T.nigroviridis:72

F6W4M3              	100.00%		H3D4J6              	100.00%
                    	       		H3CE14              	8.40%
Bootstrap support for F6W4M3 as seed ortholog is 89%.
Bootstrap support for H3D4J6 as seed ortholog is 98%.

Group of orthologs #3427. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:223

F6VMC6              	100.00%		H3CM74              	100.00%
Bootstrap support for F6VMC6 as seed ortholog is 100%.
Bootstrap support for H3CM74 as seed ortholog is 100%.

Group of orthologs #3428. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:6

F6T3M2              	100.00%		H3D5Z2              	100.00%
Bootstrap support for F6T3M2 as seed ortholog is 99%.
Bootstrap support for H3D5Z2 as seed ortholog is 49%.
Alternative seed ortholog is H3CYZ7 (6 bits away from this cluster)

Group of orthologs #3429. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:223

F6TUV6              	100.00%		H3DDB5              	100.00%
Bootstrap support for F6TUV6 as seed ortholog is 100%.
Bootstrap support for H3DDB5 as seed ortholog is 100%.

Group of orthologs #3430. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:47

F6VN74              	100.00%		H3DQT5              	100.00%
Bootstrap support for F6VN74 as seed ortholog is 100%.
Bootstrap support for H3DQT5 as seed ortholog is 99%.

Group of orthologs #3431. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:223

F6YFR8              	100.00%		H3DNM1              	100.00%
Bootstrap support for F6YFR8 as seed ortholog is 100%.
Bootstrap support for H3DNM1 as seed ortholog is 100%.

Group of orthologs #3432. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:223

F6YY07              	100.00%		Q4TAQ9              	100.00%
Bootstrap support for F6YY07 as seed ortholog is 100%.
Bootstrap support for Q4TAQ9 as seed ortholog is 100%.

Group of orthologs #3433. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 T.nigroviridis:223

H2XT70              	100.00%		H3D962              	100.00%
Bootstrap support for H2XT70 as seed ortholog is 100%.
Bootstrap support for H3D962 as seed ortholog is 100%.

Group of orthologs #3434. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:142

H2XLZ4              	100.00%		Q4SLI9              	100.00%
Bootstrap support for H2XLZ4 as seed ortholog is 99%.
Bootstrap support for Q4SLI9 as seed ortholog is 100%.

Group of orthologs #3435. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

F6U7G3              	100.00%		H3CN94              	100.00%
                    	       		H3CVG8              	21.38%
                    	       		H3C721              	8.52%
Bootstrap support for F6U7G3 as seed ortholog is 100%.
Bootstrap support for H3CN94 as seed ortholog is 100%.

Group of orthologs #3436. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:168

F6YDB9              	100.00%		H3CBW7              	100.00%
                    	       		H3CEZ2              	38.39%
                    	       		H3DHF0              	20.12%
Bootstrap support for F6YDB9 as seed ortholog is 100%.
Bootstrap support for H3CBW7 as seed ortholog is 100%.

Group of orthologs #3437. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:163

Q589R6              	100.00%		H3CBG5              	100.00%
                    	       		H3DA95              	23.77%
Bootstrap support for Q589R6 as seed ortholog is 99%.
Bootstrap support for H3CBG5 as seed ortholog is 100%.

Group of orthologs #3438. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:164

F6Z010              	100.00%		H3DG24              	100.00%
                    	       		H3CFI2              	25.82%
Bootstrap support for F6Z010 as seed ortholog is 100%.
Bootstrap support for H3DG24 as seed ortholog is 100%.

Group of orthologs #3439. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

H2XVL1              	100.00%		H3CYU3              	100.00%
                    	       		H3C807              	14.70%
Bootstrap support for H2XVL1 as seed ortholog is 100%.
Bootstrap support for H3CYU3 as seed ortholog is 100%.

Group of orthologs #3440. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

F6PZ15              	100.00%		H3CCM7              	100.00%
Bootstrap support for F6PZ15 as seed ortholog is 100%.
Bootstrap support for H3CCM7 as seed ortholog is 100%.

Group of orthologs #3441. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

F6SK91              	100.00%		H3CC71              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for H3CC71 as seed ortholog is 100%.

Group of orthologs #3442. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:164

F6VR17              	100.00%		H3CQK8              	100.00%
Bootstrap support for F6VR17 as seed ortholog is 100%.
Bootstrap support for H3CQK8 as seed ortholog is 100%.

Group of orthologs #3443. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:95

F6TYS5              	100.00%		H3DB50              	100.00%
Bootstrap support for F6TYS5 as seed ortholog is 100%.
Bootstrap support for H3DB50 as seed ortholog is 99%.

Group of orthologs #3444. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

F7B383              	100.00%		H3CNH9              	100.00%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for H3CNH9 as seed ortholog is 100%.

Group of orthologs #3445. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

F6UA18              	100.00%		H3DDC1              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for H3DDC1 as seed ortholog is 100%.

Group of orthologs #3446. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:56

H2XT04              	100.00%		H3CJ29              	100.00%
Bootstrap support for H2XT04 as seed ortholog is 99%.
Bootstrap support for H3CJ29 as seed ortholog is 94%.

Group of orthologs #3447. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

F6T6F5              	100.00%		Q4T8A1              	100.00%
Bootstrap support for F6T6F5 as seed ortholog is 100%.
Bootstrap support for Q4T8A1 as seed ortholog is 100%.

Group of orthologs #3448. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:222

H2XMH0              	100.00%		H3DK62              	100.00%
Bootstrap support for H2XMH0 as seed ortholog is 99%.
Bootstrap support for H3DK62 as seed ortholog is 100%.

Group of orthologs #3449. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 T.nigroviridis:222

Q8HIN0              	100.00%		Q4JQH8              	100.00%
Bootstrap support for Q8HIN0 as seed ortholog is 100%.
Bootstrap support for Q4JQH8 as seed ortholog is 100%.

Group of orthologs #3450. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:93

H2XMF7              	100.00%		H3CW62              	100.00%
                    	       		H3DIQ8              	8.70%
Bootstrap support for H2XMF7 as seed ortholog is 100%.
Bootstrap support for H3CW62 as seed ortholog is 97%.

Group of orthologs #3451. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:221

F6RXF3              	100.00%		H3C4M9              	100.00%
Bootstrap support for F6RXF3 as seed ortholog is 100%.
Bootstrap support for H3C4M9 as seed ortholog is 100%.

Group of orthologs #3452. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:107

C4B8X2              	100.00%		H3CYT6              	100.00%
Bootstrap support for C4B8X2 as seed ortholog is 100%.
Bootstrap support for H3CYT6 as seed ortholog is 100%.

Group of orthologs #3453. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 T.nigroviridis:221

F6T3B5              	100.00%		Q4TDY9              	100.00%
Bootstrap support for F6T3B5 as seed ortholog is 60%.
Alternative seed ortholog is F6WK26 (2 bits away from this cluster)
Bootstrap support for Q4TDY9 as seed ortholog is 100%.

Group of orthologs #3454. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:221

H2XJM4              	100.00%		H3D4N3              	100.00%
Bootstrap support for H2XJM4 as seed ortholog is 100%.
Bootstrap support for H3D4N3 as seed ortholog is 100%.

Group of orthologs #3455. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:221

F6ZG04              	100.00%		H3DN54              	100.00%
Bootstrap support for F6ZG04 as seed ortholog is 100%.
Bootstrap support for H3DN54 as seed ortholog is 100%.

Group of orthologs #3456. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:221

F7B3M4              	100.00%		Q4RZF2              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for Q4RZF2 as seed ortholog is 100%.

Group of orthologs #3457. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 T.nigroviridis:221

H2Y3J4              	100.00%		H3DEF5              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for H3DEF5 as seed ortholog is 100%.

Group of orthologs #3458. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:100

Q4H2Y1              	100.00%		H3D663              	100.00%
                    	       		H3CBU3              	40.19%
                    	       		H3DFA1              	35.22%
Bootstrap support for Q4H2Y1 as seed ortholog is 100%.
Bootstrap support for H3D663 as seed ortholog is 99%.

Group of orthologs #3459. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:158

F6ZRL9              	100.00%		H3C9Q5              	100.00%
                    	       		H3D1Z9              	7.00%
Bootstrap support for F6ZRL9 as seed ortholog is 99%.
Bootstrap support for H3C9Q5 as seed ortholog is 100%.

Group of orthologs #3460. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:131

F6Z241              	100.00%		H3BWT5              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 100%.
Bootstrap support for H3BWT5 as seed ortholog is 99%.

Group of orthologs #3461. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:62

F6UMA7              	100.00%		H3D7E9              	100.00%
Bootstrap support for F6UMA7 as seed ortholog is 100%.
Bootstrap support for H3D7E9 as seed ortholog is 97%.

Group of orthologs #3462. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:220

H2XJQ7              	100.00%		H3CJ63              	100.00%
Bootstrap support for H2XJQ7 as seed ortholog is 100%.
Bootstrap support for H3CJ63 as seed ortholog is 100%.

Group of orthologs #3463. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:220

F6YGU3              	100.00%		H3DEC4              	100.00%
Bootstrap support for F6YGU3 as seed ortholog is 90%.
Bootstrap support for H3DEC4 as seed ortholog is 100%.

Group of orthologs #3464. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:220

H2XL81              	100.00%		H3D5L4              	100.00%
Bootstrap support for H2XL81 as seed ortholog is 100%.
Bootstrap support for H3D5L4 as seed ortholog is 100%.

Group of orthologs #3465. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:220

F7ANZ8              	100.00%		H3DHB3              	100.00%
Bootstrap support for F7ANZ8 as seed ortholog is 100%.
Bootstrap support for H3DHB3 as seed ortholog is 100%.

Group of orthologs #3466. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:220

F6ZS91              	100.00%		H3DLM3              	100.00%
Bootstrap support for F6ZS91 as seed ortholog is 100%.
Bootstrap support for H3DLM3 as seed ortholog is 100%.

Group of orthologs #3467. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:3

F7A955              	100.00%		H3DLF0              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for H3DLF0 as seed ortholog is 54%.
Alternative seed ortholog is H3DLE9 (3 bits away from this cluster)

Group of orthologs #3468. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 T.nigroviridis:121

H2Y256              	100.00%		H3CRX6              	100.00%
Bootstrap support for H2Y256 as seed ortholog is 100%.
Bootstrap support for H3CRX6 as seed ortholog is 99%.

Group of orthologs #3469. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F6ZUK5              	100.00%		H3C2N4              	100.00%
                    	       		H3DGA2              	6.29%
Bootstrap support for F6ZUK5 as seed ortholog is 100%.
Bootstrap support for H3C2N4 as seed ortholog is 100%.

Group of orthologs #3470. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F6PQJ9              	100.00%		Q4SN15              	100.00%
                    	       		H3D9G4              	68.53%
Bootstrap support for F6PQJ9 as seed ortholog is 100%.
Bootstrap support for Q4SN15 as seed ortholog is 100%.

Group of orthologs #3471. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

H2XVM4              	100.00%		H3CA25              	100.00%
                    	       		H3DL50              	20.53%
Bootstrap support for H2XVM4 as seed ortholog is 100%.
Bootstrap support for H3CA25 as seed ortholog is 100%.

Group of orthologs #3472. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F6UA38              	100.00%		H3CEP6              	100.00%
Bootstrap support for F6UA38 as seed ortholog is 100%.
Bootstrap support for H3CEP6 as seed ortholog is 100%.

Group of orthologs #3473. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F6Q021              	100.00%		H3D662              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for H3D662 as seed ortholog is 100%.

Group of orthologs #3474. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:19

F6U8F3              	100.00%		H3CYU8              	100.00%
Bootstrap support for F6U8F3 as seed ortholog is 100%.
Bootstrap support for H3CYU8 as seed ortholog is 70%.
Alternative seed ortholog is H3C9Q2 (19 bits away from this cluster)

Group of orthologs #3475. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F6UU89              	100.00%		Q4SH53              	100.00%
Bootstrap support for F6UU89 as seed ortholog is 100%.
Bootstrap support for Q4SH53 as seed ortholog is 100%.

Group of orthologs #3476. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F6Z599              	100.00%		H3DLT3              	100.00%
Bootstrap support for F6Z599 as seed ortholog is 100%.
Bootstrap support for H3DLT3 as seed ortholog is 100%.

Group of orthologs #3477. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 T.nigroviridis:219

F7ALA2              	100.00%		H3DP76              	100.00%
Bootstrap support for F7ALA2 as seed ortholog is 100%.
Bootstrap support for H3DP76 as seed ortholog is 100%.

Group of orthologs #3478. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:38

F6UYC8              	100.00%		H3BWG3              	100.00%
                    	       		H3D115              	27.62%
                    	       		H3D993              	27.43%
                    	       		H3DMR8              	8.38%
Bootstrap support for F6UYC8 as seed ortholog is 80%.
Bootstrap support for H3BWG3 as seed ortholog is 84%.

Group of orthologs #3479. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6TYR7              	100.00%		H3CUF0              	100.00%
                    	       		H3D760              	26.82%
Bootstrap support for F6TYR7 as seed ortholog is 100%.
Bootstrap support for H3CUF0 as seed ortholog is 100%.

Group of orthologs #3480. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6S0J6              	100.00%		H3D5M7              	100.00%
                    	       		H3CIY9              	31.25%
Bootstrap support for F6S0J6 as seed ortholog is 100%.
Bootstrap support for H3D5M7 as seed ortholog is 100%.

Group of orthologs #3481. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

H2XP26              	100.00%		H3CUK0              	100.00%
                    	       		H3DEL0              	24.56%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for H3CUK0 as seed ortholog is 100%.

Group of orthologs #3482. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

H2Y2K9              	100.00%		H3DK94              	100.00%
                    	       		H3DJD6              	10.14%
Bootstrap support for H2Y2K9 as seed ortholog is 100%.
Bootstrap support for H3DK94 as seed ortholog is 100%.

Group of orthologs #3483. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 T.nigroviridis:27

F6QL68              	100.00%		H3CYP2              	100.00%
Bootstrap support for F6QL68 as seed ortholog is 65%.
Alternative seed ortholog is H2XQT4 (13 bits away from this cluster)
Bootstrap support for H3CYP2 as seed ortholog is 78%.

Group of orthologs #3484. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6U6R8              	100.00%		H3CUW9              	100.00%
Bootstrap support for F6U6R8 as seed ortholog is 100%.
Bootstrap support for H3CUW9 as seed ortholog is 100%.

Group of orthologs #3485. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6YYL7              	100.00%		H3CE90              	100.00%
Bootstrap support for F6YYL7 as seed ortholog is 100%.
Bootstrap support for H3CE90 as seed ortholog is 100%.

Group of orthologs #3486. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:158

F7AH68              	100.00%		H3CRX2              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 100%.
Bootstrap support for H3CRX2 as seed ortholog is 100%.

Group of orthologs #3487. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F7AEJ4              	100.00%		H3CXF6              	100.00%
Bootstrap support for F7AEJ4 as seed ortholog is 100%.
Bootstrap support for H3CXF6 as seed ortholog is 100%.

Group of orthologs #3488. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

H2XQZ0              	100.00%		H3CLQ6              	100.00%
Bootstrap support for H2XQZ0 as seed ortholog is 100%.
Bootstrap support for H3CLQ6 as seed ortholog is 100%.

Group of orthologs #3489. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:155

F6UHS2              	100.00%		Q4SP62              	100.00%
Bootstrap support for F6UHS2 as seed ortholog is 100%.
Bootstrap support for Q4SP62 as seed ortholog is 100%.

Group of orthologs #3490. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6UJL1              	100.00%		Q4T8Z8              	100.00%
Bootstrap support for F6UJL1 as seed ortholog is 100%.
Bootstrap support for Q4T8Z8 as seed ortholog is 100%.

Group of orthologs #3491. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6ZIF8              	100.00%		H3DHU6              	100.00%
Bootstrap support for F6ZIF8 as seed ortholog is 100%.
Bootstrap support for H3DHU6 as seed ortholog is 100%.

Group of orthologs #3492. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:157

F6XT02              	100.00%		H3DPX1              	100.00%
Bootstrap support for F6XT02 as seed ortholog is 100%.
Bootstrap support for H3DPX1 as seed ortholog is 100%.

Group of orthologs #3493. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

F6WFE5              	100.00%		Q4SD68              	100.00%
Bootstrap support for F6WFE5 as seed ortholog is 100%.
Bootstrap support for Q4SD68 as seed ortholog is 100%.

Group of orthologs #3494. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:218

H2XXS5              	100.00%		H3CS98              	100.00%
Bootstrap support for H2XXS5 as seed ortholog is 100%.
Bootstrap support for H3CS98 as seed ortholog is 100%.

Group of orthologs #3495. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 T.nigroviridis:159

I6L212              	100.00%		H3DL06              	100.00%
Bootstrap support for I6L212 as seed ortholog is 100%.
Bootstrap support for H3DL06 as seed ortholog is 100%.

Group of orthologs #3496. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

F6QNF1              	100.00%		H3CPE5              	100.00%
                    	       		H3D4U4              	21.14%
                    	       		H3CPA2              	18.45%
                    	       		H3DME4              	5.21%
Bootstrap support for F6QNF1 as seed ortholog is 100%.
Bootstrap support for H3CPE5 as seed ortholog is 100%.

Group of orthologs #3497. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

F6ZI65              	100.00%		H3DAJ1              	100.00%
                    	       		H3C5P0              	40.28%
                    	       		H3D8E2              	22.92%
Bootstrap support for F6ZI65 as seed ortholog is 100%.
Bootstrap support for H3DAJ1 as seed ortholog is 100%.

Group of orthologs #3498. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:51

F6XHG0              	100.00%		H3CN02              	100.00%
                    	       		H3C7V9              	15.14%
Bootstrap support for F6XHG0 as seed ortholog is 100%.
Bootstrap support for H3CN02 as seed ortholog is 91%.

Group of orthologs #3499. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:172

F6VTD9              	100.00%		H3D8C2              	100.00%
F6SF06              	22.55%		
Bootstrap support for F6VTD9 as seed ortholog is 62%.
Alternative seed ortholog is F6YQB8 (12 bits away from this cluster)
Bootstrap support for H3D8C2 as seed ortholog is 99%.

Group of orthologs #3500. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

F7B8N2              	100.00%		H3CSH4              	100.00%
Bootstrap support for F7B8N2 as seed ortholog is 100%.
Bootstrap support for H3CSH4 as seed ortholog is 100%.

Group of orthologs #3501. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

F6XC87              	100.00%		H3D8E0              	100.00%
Bootstrap support for F6XC87 as seed ortholog is 100%.
Bootstrap support for H3D8E0 as seed ortholog is 100%.

Group of orthologs #3502. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:111

F6RZG4              	100.00%		H3DQF2              	100.00%
Bootstrap support for F6RZG4 as seed ortholog is 100%.
Bootstrap support for H3DQF2 as seed ortholog is 99%.

Group of orthologs #3503. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

H2XR04              	100.00%		H3CNX2              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 100%.
Bootstrap support for H3CNX2 as seed ortholog is 100%.

Group of orthologs #3504. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

F6X3L7              	100.00%		H3DPK4              	100.00%
Bootstrap support for F6X3L7 as seed ortholog is 100%.
Bootstrap support for H3DPK4 as seed ortholog is 100%.

Group of orthologs #3505. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

F6XTQ1              	100.00%		Q4SWW3              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for Q4SWW3 as seed ortholog is 100%.

Group of orthologs #3506. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 T.nigroviridis:217

H2XVU3              	100.00%		H3DKY4              	100.00%
Bootstrap support for H2XVU3 as seed ortholog is 100%.
Bootstrap support for H3DKY4 as seed ortholog is 100%.

Group of orthologs #3507. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:147

F7B4Q5              	100.00%		H3C598              	100.00%
Bootstrap support for F7B4Q5 as seed ortholog is 100%.
Bootstrap support for H3C598 as seed ortholog is 99%.

Group of orthologs #3508. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:133

F6VCR2              	100.00%		H3CYY9              	100.00%
Bootstrap support for F6VCR2 as seed ortholog is 100%.
Bootstrap support for H3CYY9 as seed ortholog is 100%.

Group of orthologs #3509. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:216

F6UUF9              	100.00%		H3D824              	100.00%
Bootstrap support for F6UUF9 as seed ortholog is 100%.
Bootstrap support for H3D824 as seed ortholog is 100%.

Group of orthologs #3510. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:157

H2XYY9              	100.00%		H3CAI5              	100.00%
Bootstrap support for H2XYY9 as seed ortholog is 100%.
Bootstrap support for H3CAI5 as seed ortholog is 99%.

Group of orthologs #3511. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:216

F7AB24              	100.00%		H3D944              	100.00%
Bootstrap support for F7AB24 as seed ortholog is 100%.
Bootstrap support for H3D944 as seed ortholog is 100%.

Group of orthologs #3512. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 T.nigroviridis:216

F7AD34              	100.00%		Q4SDF4              	100.00%
Bootstrap support for F7AD34 as seed ortholog is 100%.
Bootstrap support for Q4SDF4 as seed ortholog is 100%.

Group of orthologs #3513. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:30

F6T0Z3              	100.00%		H3C708              	100.00%
F6S9Q0              	17.85%		Q4S8R0              	5.26%
F6S9P0              	17.54%		
Bootstrap support for F6T0Z3 as seed ortholog is 87%.
Bootstrap support for H3C708 as seed ortholog is 85%.

Group of orthologs #3514. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:111

H2Y012              	100.00%		H3CSR1              	100.00%
                    	       		H3DCY9              	37.22%
                    	       		Q4SYK9              	34.62%
                    	       		Q4SJ27              	24.11%
Bootstrap support for H2Y012 as seed ortholog is 81%.
Bootstrap support for H3CSR1 as seed ortholog is 99%.

Group of orthologs #3515. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:111

F6RYV9              	100.00%		H3D0I2              	100.00%
                    	       		H3DCG2              	44.53%
Bootstrap support for F6RYV9 as seed ortholog is 99%.
Bootstrap support for H3D0I2 as seed ortholog is 99%.

Group of orthologs #3516. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:44

F7ATF3              	100.00%		H3CNN5              	100.00%
                    	       		H3DHS2              	14.61%
Bootstrap support for F7ATF3 as seed ortholog is 100%.
Bootstrap support for H3CNN5 as seed ortholog is 87%.

Group of orthologs #3517. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

F6Z6P7              	100.00%		H3CYA3              	100.00%
                    	       		H3CPN7              	45.61%
Bootstrap support for F6Z6P7 as seed ortholog is 100%.
Bootstrap support for H3CYA3 as seed ortholog is 100%.

Group of orthologs #3518. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:139

F6VLD0              	100.00%		H3CF12              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for H3CF12 as seed ortholog is 100%.

Group of orthologs #3519. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

F6RED0              	100.00%		H3CUE5              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for H3CUE5 as seed ortholog is 100%.

Group of orthologs #3520. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:215

F6TNT4              	100.00%		H3D2Z7              	100.00%
Bootstrap support for F6TNT4 as seed ortholog is 99%.
Bootstrap support for H3D2Z7 as seed ortholog is 100%.

Group of orthologs #3521. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

H2XQA6              	100.00%		H3CL57              	100.00%
Bootstrap support for H2XQA6 as seed ortholog is 100%.
Bootstrap support for H3CL57 as seed ortholog is 100%.

Group of orthologs #3522. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

F6U3F2              	100.00%		Q4SGV0              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for Q4SGV0 as seed ortholog is 100%.

Group of orthologs #3523. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:128

F6TTC3              	100.00%		Q4TBU2              	100.00%
Bootstrap support for F6TTC3 as seed ortholog is 100%.
Bootstrap support for Q4TBU2 as seed ortholog is 100%.

Group of orthologs #3524. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

F6ZIM0              	100.00%		H3DK30              	100.00%
Bootstrap support for F6ZIM0 as seed ortholog is 100%.
Bootstrap support for H3DK30 as seed ortholog is 100%.

Group of orthologs #3525. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:215

H2XUW4              	100.00%		H3D3K7              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 99%.
Bootstrap support for H3D3K7 as seed ortholog is 100%.

Group of orthologs #3526. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

H2Y0L1              	100.00%		H3CYA4              	100.00%
Bootstrap support for H2Y0L1 as seed ortholog is 100%.
Bootstrap support for H3CYA4 as seed ortholog is 100%.

Group of orthologs #3527. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 T.nigroviridis:215

H2XYD5              	100.00%		H3D920              	100.00%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for H3D920 as seed ortholog is 100%.

Group of orthologs #3528. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 T.nigroviridis:68

F6XEB9              	100.00%		H3DNH9              	100.00%
F6U351              	9.51%		Q4SRX3              	22.54%
Bootstrap support for F6XEB9 as seed ortholog is 74%.
Alternative seed ortholog is F6XYE9 (21 bits away from this cluster)
Bootstrap support for H3DNH9 as seed ortholog is 97%.

Group of orthologs #3529. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 T.nigroviridis:142

F6S6I4              	100.00%		H3D664              	100.00%
                    	       		H3D761              	44.24%
Bootstrap support for F6S6I4 as seed ortholog is 65%.
Alternative seed ortholog is F6SPL5 (14 bits away from this cluster)
Bootstrap support for H3D664 as seed ortholog is 99%.

Group of orthologs #3530. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 T.nigroviridis:60

F6T5H3              	100.00%		H3DMH9              	100.00%
                    	       		H3DNR8              	18.57%
Bootstrap support for F6T5H3 as seed ortholog is 94%.
Bootstrap support for H3DMH9 as seed ortholog is 91%.

Group of orthologs #3531. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:214

F6VJL7              	100.00%		H3BXT4              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for H3BXT4 as seed ortholog is 100%.

Group of orthologs #3532. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:214

F6VBT4              	100.00%		H3C7N3              	100.00%
Bootstrap support for F6VBT4 as seed ortholog is 100%.
Bootstrap support for H3C7N3 as seed ortholog is 100%.

Group of orthologs #3533. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:56

F6R6I1              	100.00%		H3CQR0              	100.00%
Bootstrap support for F6R6I1 as seed ortholog is 99%.
Bootstrap support for H3CQR0 as seed ortholog is 99%.

Group of orthologs #3534. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:214

F6QZ12              	100.00%		H3D9N5              	100.00%
Bootstrap support for F6QZ12 as seed ortholog is 100%.
Bootstrap support for H3D9N5 as seed ortholog is 100%.

Group of orthologs #3535. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:214

F6T1T3              	100.00%		H3D6U5              	100.00%
Bootstrap support for F6T1T3 as seed ortholog is 100%.
Bootstrap support for H3D6U5 as seed ortholog is 100%.

Group of orthologs #3536. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:214

F7AQH5              	100.00%		H3CN46              	100.00%
Bootstrap support for F7AQH5 as seed ortholog is 100%.
Bootstrap support for H3CN46 as seed ortholog is 100%.

Group of orthologs #3537. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:214

F7B0F3              	100.00%		H3DE98              	100.00%
Bootstrap support for F7B0F3 as seed ortholog is 100%.
Bootstrap support for H3DE98 as seed ortholog is 100%.

Group of orthologs #3538. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:26

H2XU01              	100.00%		H3D112              	100.00%
Bootstrap support for H2XU01 as seed ortholog is 100%.
Bootstrap support for H3D112 as seed ortholog is 76%.

Group of orthologs #3539. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:75

F6ZMB2              	100.00%		H3DNX7              	100.00%
Bootstrap support for F6ZMB2 as seed ortholog is 94%.
Bootstrap support for H3DNX7 as seed ortholog is 99%.

Group of orthologs #3540. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:57

Q4H2U4              	100.00%		H3CNT3              	100.00%
Bootstrap support for Q4H2U4 as seed ortholog is 100%.
Bootstrap support for H3CNT3 as seed ortholog is 93%.

Group of orthologs #3541. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 T.nigroviridis:33

H2XTB5              	100.00%		H3DNE4              	100.00%
Bootstrap support for H2XTB5 as seed ortholog is 100%.
Bootstrap support for H3DNE4 as seed ortholog is 87%.

Group of orthologs #3542. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

F6S8N1              	100.00%		H3CEX3              	100.00%
                    	       		H3D198              	8.48%
Bootstrap support for F6S8N1 as seed ortholog is 100%.
Bootstrap support for H3CEX3 as seed ortholog is 100%.

Group of orthologs #3543. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:72

F7BGY2              	100.00%		H3CHF2              	100.00%
                    	       		H3C7T6              	17.57%
Bootstrap support for F7BGY2 as seed ortholog is 100%.
Bootstrap support for H3CHF2 as seed ortholog is 99%.

Group of orthologs #3544. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 T.nigroviridis:39

F6ZST9              	100.00%		H3D909              	100.00%
                    	       		H3D2R0              	16.28%
Bootstrap support for F6ZST9 as seed ortholog is 84%.
Bootstrap support for H3D909 as seed ortholog is 99%.

Group of orthologs #3545. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:100

H2Y3T6              	100.00%		Q4S7E9              	100.00%
                    	       		Q4SAD9              	71.43%
Bootstrap support for H2Y3T6 as seed ortholog is 97%.
Bootstrap support for Q4S7E9 as seed ortholog is 100%.

Group of orthologs #3546. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

Q4H3U1              	100.00%		Q4SU51              	100.00%
                    	       		Q4S2D3              	46.24%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for Q4SU51 as seed ortholog is 100%.

Group of orthologs #3547. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

F6RQ34              	100.00%		H3CTW9              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for H3CTW9 as seed ortholog is 100%.

Group of orthologs #3548. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:24

F6ZZG0              	100.00%		H3BYX9              	100.00%
Bootstrap support for F6ZZG0 as seed ortholog is 100%.
Bootstrap support for H3BYX9 as seed ortholog is 65%.
Alternative seed ortholog is H3D405 (24 bits away from this cluster)

Group of orthologs #3549. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 T.nigroviridis:60

F6SW20              	100.00%		H3CRJ0              	100.00%
Bootstrap support for F6SW20 as seed ortholog is 85%.
Bootstrap support for H3CRJ0 as seed ortholog is 92%.

Group of orthologs #3550. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

H2XK93              	100.00%		H3C118              	100.00%
Bootstrap support for H2XK93 as seed ortholog is 100%.
Bootstrap support for H3C118 as seed ortholog is 100%.

Group of orthologs #3551. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

H2XJL7              	100.00%		H3CG17              	100.00%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for H3CG17 as seed ortholog is 100%.

Group of orthologs #3552. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:52

H2XXE6              	100.00%		H3C959              	100.00%
Bootstrap support for H2XXE6 as seed ortholog is 100%.
Bootstrap support for H3C959 as seed ortholog is 94%.

Group of orthologs #3553. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:168

F6UF94              	100.00%		H3DMD0              	100.00%
Bootstrap support for F6UF94 as seed ortholog is 100%.
Bootstrap support for H3DMD0 as seed ortholog is 100%.

Group of orthologs #3554. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

F6Z6N2              	100.00%		H3D730              	100.00%
Bootstrap support for F6Z6N2 as seed ortholog is 100%.
Bootstrap support for H3D730 as seed ortholog is 100%.

Group of orthologs #3555. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

F6VQ55              	100.00%		H3DP86              	100.00%
Bootstrap support for F6VQ55 as seed ortholog is 100%.
Bootstrap support for H3DP86 as seed ortholog is 100%.

Group of orthologs #3556. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

F6XCL4              	100.00%		Q4S4H0              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for Q4S4H0 as seed ortholog is 100%.

Group of orthologs #3557. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

F7BB49              	100.00%		Q4T330              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for Q4T330 as seed ortholog is 100%.

Group of orthologs #3558. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:213

H2XLX1              	100.00%		Q4RJL4              	100.00%
Bootstrap support for H2XLX1 as seed ortholog is 95%.
Bootstrap support for Q4RJL4 as seed ortholog is 100%.

Group of orthologs #3559. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 T.nigroviridis:213

H2XZV1              	100.00%		H3DAG9              	100.00%
Bootstrap support for H2XZV1 as seed ortholog is 100%.
Bootstrap support for H3DAG9 as seed ortholog is 100%.

Group of orthologs #3560. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:165

F6VAC9              	100.00%		H3D449              	100.00%
F6U176              	16.46%		
F6XA69              	9.87%		
Bootstrap support for F6VAC9 as seed ortholog is 100%.
Bootstrap support for H3D449 as seed ortholog is 100%.

Group of orthologs #3561. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:212

H2Y2Q4              	100.00%		H3CP39              	100.00%
                    	       		Q4SIN4              	13.77%
                    	       		H3D7X2              	10.99%
Bootstrap support for H2Y2Q4 as seed ortholog is 63%.
Alternative seed ortholog is F6QKL4 (33 bits away from this cluster)
Bootstrap support for H3CP39 as seed ortholog is 100%.

Group of orthologs #3562. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

H2XVP4              	100.00%		H3D3C6              	100.00%
                    	       		H3DKY1              	12.26%
                    	       		H3D5T4              	9.29%
Bootstrap support for H2XVP4 as seed ortholog is 100%.
Bootstrap support for H3D3C6 as seed ortholog is 100%.

Group of orthologs #3563. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 T.nigroviridis:125

F6PUJ2              	100.00%		H3CNV5              	100.00%
                    	       		H3C3D2              	22.80%
Bootstrap support for F6PUJ2 as seed ortholog is 90%.
Bootstrap support for H3CNV5 as seed ortholog is 96%.

Group of orthologs #3564. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

H2XSJ8              	100.00%		H3C944              	100.00%
                    	       		H3D6P2              	11.04%
Bootstrap support for H2XSJ8 as seed ortholog is 100%.
Bootstrap support for H3C944 as seed ortholog is 100%.

Group of orthologs #3565. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

H2XRE1              	100.00%		H3DAZ7              	100.00%
                    	       		H3CFP1              	24.36%
Bootstrap support for H2XRE1 as seed ortholog is 100%.
Bootstrap support for H3DAZ7 as seed ortholog is 100%.

Group of orthologs #3566. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

F7ABY6              	100.00%		H3C4H2              	100.00%
Bootstrap support for F7ABY6 as seed ortholog is 100%.
Bootstrap support for H3C4H2 as seed ortholog is 100%.

Group of orthologs #3567. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:212

F6ZPY9              	100.00%		H3CCK6              	100.00%
Bootstrap support for F6ZPY9 as seed ortholog is 94%.
Bootstrap support for H3CCK6 as seed ortholog is 100%.

Group of orthologs #3568. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:56

F6U212              	100.00%		H3D754              	100.00%
Bootstrap support for F6U212 as seed ortholog is 100%.
Bootstrap support for H3D754 as seed ortholog is 98%.

Group of orthologs #3569. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:86

F6UI12              	100.00%		H3D8N8              	100.00%
Bootstrap support for F6UI12 as seed ortholog is 99%.
Bootstrap support for H3D8N8 as seed ortholog is 98%.

Group of orthologs #3570. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

F6Z2T6              	100.00%		H3CUL1              	100.00%
Bootstrap support for F6Z2T6 as seed ortholog is 100%.
Bootstrap support for H3CUL1 as seed ortholog is 100%.

Group of orthologs #3571. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:115

F7AGZ7              	100.00%		H3D1W8              	100.00%
Bootstrap support for F7AGZ7 as seed ortholog is 100%.
Bootstrap support for H3D1W8 as seed ortholog is 98%.

Group of orthologs #3572. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

H2XPR5              	100.00%		H3D9H8              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for H3D9H8 as seed ortholog is 100%.

Group of orthologs #3573. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:34

H2XSM5              	100.00%		H3DBV3              	100.00%
Bootstrap support for H2XSM5 as seed ortholog is 100%.
Bootstrap support for H3DBV3 as seed ortholog is 89%.

Group of orthologs #3574. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 T.nigroviridis:212

H2XV35              	100.00%		H3DE49              	100.00%
Bootstrap support for H2XV35 as seed ortholog is 100%.
Bootstrap support for H3DE49 as seed ortholog is 100%.

Group of orthologs #3575. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 T.nigroviridis:24

H2XNP4              	100.00%		Q4RM64              	100.00%
Bootstrap support for H2XNP4 as seed ortholog is 81%.
Bootstrap support for Q4RM64 as seed ortholog is 73%.
Alternative seed ortholog is H3C956 (24 bits away from this cluster)

Group of orthologs #3576. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 T.nigroviridis:211

F6UZ84              	100.00%		H3CND6              	100.00%
                    	       		H3C9V5              	19.20%
Bootstrap support for F6UZ84 as seed ortholog is 100%.
Bootstrap support for H3CND6 as seed ortholog is 100%.

Group of orthologs #3577. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 T.nigroviridis:211

F7A7P7              	100.00%		H3BZZ7              	100.00%
Bootstrap support for F7A7P7 as seed ortholog is 100%.
Bootstrap support for H3BZZ7 as seed ortholog is 100%.

Group of orthologs #3578. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 T.nigroviridis:211

F6PP67              	100.00%		H3DKB4              	100.00%
Bootstrap support for F6PP67 as seed ortholog is 100%.
Bootstrap support for H3DKB4 as seed ortholog is 100%.

Group of orthologs #3579. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F6ZP94              	100.00%		H3DL19              	100.00%
H2Y3S1              	100.00%		H3C3U2              	100.00%
F7BBL3              	74.29%		
Bootstrap support for F6ZP94 as seed ortholog is 100%.
Bootstrap support for H2Y3S1 as seed ortholog is 100%.
Bootstrap support for H3DL19 as seed ortholog is 100%.
Bootstrap support for H3C3U2 as seed ortholog is 100%.

Group of orthologs #3580. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F6S7L1              	100.00%		H3CZB6              	100.00%
                    	       		H3DH41              	31.78%
                    	       		H3D3D8              	19.68%
Bootstrap support for F6S7L1 as seed ortholog is 100%.
Bootstrap support for H3CZB6 as seed ortholog is 100%.

Group of orthologs #3581. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F6ZYA6              	100.00%		H3CM66              	100.00%
                    	       		H3CJZ3              	18.39%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for H3CM66 as seed ortholog is 100%.

Group of orthologs #3582. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 T.nigroviridis:149

H2XZ79              	100.00%		H3CX20              	100.00%
                    	       		H3D677              	35.04%
Bootstrap support for H2XZ79 as seed ortholog is 82%.
Bootstrap support for H3CX20 as seed ortholog is 99%.

Group of orthologs #3583. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F6TVK0              	100.00%		H3DBP0              	100.00%
Bootstrap support for F6TVK0 as seed ortholog is 100%.
Bootstrap support for H3DBP0 as seed ortholog is 100%.

Group of orthologs #3584. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:210

F6YBL5              	100.00%		H3D207              	100.00%
Bootstrap support for F6YBL5 as seed ortholog is 99%.
Bootstrap support for H3D207 as seed ortholog is 100%.

Group of orthologs #3585. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

H2XX74              	100.00%		H3CIX9              	100.00%
Bootstrap support for H2XX74 as seed ortholog is 100%.
Bootstrap support for H3CIX9 as seed ortholog is 100%.

Group of orthologs #3586. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

H2XPE3              	100.00%		H3CV62              	100.00%
Bootstrap support for H2XPE3 as seed ortholog is 100%.
Bootstrap support for H3CV62 as seed ortholog is 100%.

Group of orthologs #3587. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F6VW31              	100.00%		H3DN66              	100.00%
Bootstrap support for F6VW31 as seed ortholog is 100%.
Bootstrap support for H3DN66 as seed ortholog is 100%.

Group of orthologs #3588. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

F7B9W5              	100.00%		H3DF48              	100.00%
Bootstrap support for F7B9W5 as seed ortholog is 100%.
Bootstrap support for H3DF48 as seed ortholog is 100%.

Group of orthologs #3589. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

H2Y184              	100.00%		H3CQM7              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for H3CQM7 as seed ortholog is 100%.

Group of orthologs #3590. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 T.nigroviridis:210

H2XPM9              	100.00%		Q4SKA3              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 100%.
Bootstrap support for Q4SKA3 as seed ortholog is 100%.

Group of orthologs #3591. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:54

F7BIM6              	100.00%		H3DQB1              	100.00%
                    	       		H3CAF7              	28.03%
                    	       		H3DET1              	23.54%
                    	       		H3CQ26              	20.91%
                    	       		H3DCL8              	5.63%
Bootstrap support for F7BIM6 as seed ortholog is 79%.
Bootstrap support for H3DQB1 as seed ortholog is 70%.
Alternative seed ortholog is H3CD00 (54 bits away from this cluster)

Group of orthologs #3592. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:145

H2XWB4              	100.00%		H3CV75              	100.00%
                    	       		H3DGS0              	28.09%
                    	       		H3C2R8              	14.89%
Bootstrap support for H2XWB4 as seed ortholog is 100%.
Bootstrap support for H3CV75 as seed ortholog is 99%.

Group of orthologs #3593. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:139

F6Y3T4              	100.00%		H3CBX7              	100.00%
                    	       		H3D054              	6.65%
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for H3CBX7 as seed ortholog is 100%.

Group of orthologs #3594. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:209

F6XS17              	100.00%		H3CQM4              	100.00%
                    	       		H3DHL1              	28.22%
Bootstrap support for F6XS17 as seed ortholog is 100%.
Bootstrap support for H3CQM4 as seed ortholog is 100%.

Group of orthologs #3595. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:209

F6WH15              	100.00%		H3BY52              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for H3BY52 as seed ortholog is 100%.

Group of orthologs #3596. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:209

F7A4P8              	100.00%		H3CNQ4              	100.00%
Bootstrap support for F7A4P8 as seed ortholog is 100%.
Bootstrap support for H3CNQ4 as seed ortholog is 100%.

Group of orthologs #3597. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:209

F6ZZX7              	100.00%		H3CR35              	100.00%
Bootstrap support for F6ZZX7 as seed ortholog is 100%.
Bootstrap support for H3CR35 as seed ortholog is 100%.

Group of orthologs #3598. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:123

H2XNZ7              	100.00%		H3CHN5              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 100%.
Bootstrap support for H3CHN5 as seed ortholog is 100%.

Group of orthologs #3599. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:66

F6RG94              	100.00%		Q4RYW4              	100.00%
Bootstrap support for F6RG94 as seed ortholog is 99%.
Bootstrap support for Q4RYW4 as seed ortholog is 92%.

Group of orthologs #3600. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:209

F6SPH4              	100.00%		Q4SSY8              	100.00%
Bootstrap support for F6SPH4 as seed ortholog is 100%.
Bootstrap support for Q4SSY8 as seed ortholog is 100%.

Group of orthologs #3601. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:27

H2XVX4              	100.00%		H3CQB8              	100.00%
Bootstrap support for H2XVX4 as seed ortholog is 100%.
Bootstrap support for H3CQB8 as seed ortholog is 91%.

Group of orthologs #3602. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:209

F7A082              	100.00%		H3DEN3              	100.00%
Bootstrap support for F7A082 as seed ortholog is 99%.
Bootstrap support for H3DEN3 as seed ortholog is 100%.

Group of orthologs #3603. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 T.nigroviridis:209

F6ZXN3              	100.00%		H3DP34              	100.00%
Bootstrap support for F6ZXN3 as seed ortholog is 100%.
Bootstrap support for H3DP34 as seed ortholog is 100%.

Group of orthologs #3604. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:29

F6UBJ9              	100.00%		Q4RMJ5              	100.00%
                    	       		H3DA05              	67.41%
                    	       		H3D2L8              	61.98%
                    	       		Q4T8N8              	5.93%
                    	       		H3BZL0              	5.19%
Bootstrap support for F6UBJ9 as seed ortholog is 93%.
Bootstrap support for Q4RMJ5 as seed ortholog is 75%.

Group of orthologs #3605. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:208

F6U4B7              	100.00%		H3D5X3              	100.00%
                    	       		H3DKW4              	19.73%
                    	       		H3BVZ2              	18.89%
                    	       		H3CEM0              	14.82%
Bootstrap support for F6U4B7 as seed ortholog is 100%.
Bootstrap support for H3D5X3 as seed ortholog is 100%.

Group of orthologs #3606. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:208

F6UIM4              	100.00%		H3DGL9              	100.00%
                    	       		H3D190              	7.50%
Bootstrap support for F6UIM4 as seed ortholog is 100%.
Bootstrap support for H3DGL9 as seed ortholog is 100%.

Group of orthologs #3607. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:208

H2XZ97              	100.00%		H3DGR9              	100.00%
                    	       		H3D7D6              	12.37%
Bootstrap support for H2XZ97 as seed ortholog is 100%.
Bootstrap support for H3DGR9 as seed ortholog is 100%.

Group of orthologs #3608. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:208

F6SNN1              	100.00%		H3D550              	100.00%
Bootstrap support for F6SNN1 as seed ortholog is 100%.
Bootstrap support for H3D550 as seed ortholog is 100%.

Group of orthologs #3609. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:208

H2XQV8              	100.00%		H3BXD7              	100.00%
Bootstrap support for H2XQV8 as seed ortholog is 100%.
Bootstrap support for H3BXD7 as seed ortholog is 100%.

Group of orthologs #3610. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 T.nigroviridis:4

Q4H342              	100.00%		H3DI63              	100.00%
Bootstrap support for Q4H342 as seed ortholog is 100%.
Bootstrap support for H3DI63 as seed ortholog is 71%.
Alternative seed ortholog is H3CJW9 (4 bits away from this cluster)

Group of orthologs #3611. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:207

F6WT98              	100.00%		H3CY74              	100.00%
                    	       		H3CLA7              	33.86%
                    	       		H3DKZ0              	12.74%
                    	       		H3D7W2              	12.59%
                    	       		H3DF88              	10.85%
Bootstrap support for F6WT98 as seed ortholog is 100%.
Bootstrap support for H3CY74 as seed ortholog is 100%.

Group of orthologs #3612. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:71

F6Q521              	100.00%		H3DIH5              	100.00%
                    	       		H3CBF2              	12.64%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for H3DIH5 as seed ortholog is 99%.

Group of orthologs #3613. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:207

F6QM85              	100.00%		H3DQ15              	100.00%
                    	       		H3D7S6              	8.71%
Bootstrap support for F6QM85 as seed ortholog is 100%.
Bootstrap support for H3DQ15 as seed ortholog is 100%.

Group of orthologs #3614. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:113

F6Y1B6              	100.00%		Q4S279              	100.00%
                    	       		Q4RUW4              	44.71%
Bootstrap support for F6Y1B6 as seed ortholog is 100%.
Bootstrap support for Q4S279 as seed ortholog is 99%.

Group of orthologs #3615. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:207

F7BAJ6              	100.00%		H3CB22              	100.00%
Bootstrap support for F7BAJ6 as seed ortholog is 100%.
Bootstrap support for H3CB22 as seed ortholog is 100%.

Group of orthologs #3616. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:148

F6XEJ6              	100.00%		H3DE39              	100.00%
Bootstrap support for F6XEJ6 as seed ortholog is 100%.
Bootstrap support for H3DE39 as seed ortholog is 100%.

Group of orthologs #3617. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:49

H2XNU9              	100.00%		H3CVY2              	100.00%
Bootstrap support for H2XNU9 as seed ortholog is 61%.
Alternative seed ortholog is H2XQ86 (8 bits away from this cluster)
Bootstrap support for H3CVY2 as seed ortholog is 94%.

Group of orthologs #3618. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:207

F6XH64              	100.00%		H3DL42              	100.00%
Bootstrap support for F6XH64 as seed ortholog is 100%.
Bootstrap support for H3DL42 as seed ortholog is 100%.

Group of orthologs #3619. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:125

F6WHB0              	100.00%		Q4RMK5              	100.00%
Bootstrap support for F6WHB0 as seed ortholog is 100%.
Bootstrap support for Q4RMK5 as seed ortholog is 100%.

Group of orthologs #3620. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:207

H2XTR2              	100.00%		H3D6L9              	100.00%
Bootstrap support for H2XTR2 as seed ortholog is 100%.
Bootstrap support for H3D6L9 as seed ortholog is 100%.

Group of orthologs #3621. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 T.nigroviridis:207

H2XKM0              	100.00%		Q4SPI9              	100.00%
Bootstrap support for H2XKM0 as seed ortholog is 100%.
Bootstrap support for Q4SPI9 as seed ortholog is 100%.

Group of orthologs #3622. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:37

F6QI05              	100.00%		H3D2G2              	100.00%
                    	       		H3DNP6              	45.07%
                    	       		H3CTN8              	42.25%
                    	       		Q4RFZ8              	42.25%
                    	       		H3BZD9              	26.76%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for H3D2G2 as seed ortholog is 95%.

Group of orthologs #3623. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:138

F7AVR1              	100.00%		H3DI76              	100.00%
                    	       		H3CUD1              	42.78%
Bootstrap support for F7AVR1 as seed ortholog is 100%.
Bootstrap support for H3DI76 as seed ortholog is 99%.

Group of orthologs #3624. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:206

F6W6D7              	100.00%		H3DEG5              	100.00%
Bootstrap support for F6W6D7 as seed ortholog is 100%.
Bootstrap support for H3DEG5 as seed ortholog is 100%.

Group of orthologs #3625. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 T.nigroviridis:137

H2Y3L9              	100.00%		Q4S4J7              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for Q4S4J7 as seed ortholog is 100%.

Group of orthologs #3626. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:94

F6VH27              	100.00%		H3CDF3              	100.00%
                    	       		Q4SGG8              	6.06%
Bootstrap support for F6VH27 as seed ortholog is 97%.
Bootstrap support for H3CDF3 as seed ortholog is 99%.

Group of orthologs #3627. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6Z998              	100.00%		H3CAG3              	100.00%
                    	       		H3CW12              	62.30%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for H3CAG3 as seed ortholog is 100%.

Group of orthologs #3628. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:34

F6WZ85              	100.00%		H3CV65              	100.00%
                    	       		H3D4Z6              	6.40%
Bootstrap support for F6WZ85 as seed ortholog is 98%.
Bootstrap support for H3CV65 as seed ortholog is 87%.

Group of orthologs #3629. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

Q4H3E0              	100.00%		H3CX16              	100.00%
                    	       		H3CGV7              	23.08%
Bootstrap support for Q4H3E0 as seed ortholog is 100%.
Bootstrap support for H3CX16 as seed ortholog is 100%.

Group of orthologs #3630. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6VHM6              	100.00%		H3CI57              	100.00%
Bootstrap support for F6VHM6 as seed ortholog is 100%.
Bootstrap support for H3CI57 as seed ortholog is 100%.

Group of orthologs #3631. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6W1S6              	100.00%		H3CHJ0              	100.00%
Bootstrap support for F6W1S6 as seed ortholog is 100%.
Bootstrap support for H3CHJ0 as seed ortholog is 100%.

Group of orthologs #3632. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6T5W3              	100.00%		H3CTY7              	100.00%
Bootstrap support for F6T5W3 as seed ortholog is 100%.
Bootstrap support for H3CTY7 as seed ortholog is 100%.

Group of orthologs #3633. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6Y7F7              	100.00%		H3CCP4              	100.00%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for H3CCP4 as seed ortholog is 100%.

Group of orthologs #3634. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6UIW1              	100.00%		H3CW42              	100.00%
Bootstrap support for F6UIW1 as seed ortholog is 100%.
Bootstrap support for H3CW42 as seed ortholog is 100%.

Group of orthologs #3635. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6XPS9              	100.00%		H3CVW8              	100.00%
Bootstrap support for F6XPS9 as seed ortholog is 100%.
Bootstrap support for H3CVW8 as seed ortholog is 100%.

Group of orthologs #3636. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F7AR57              	100.00%		H3CPZ8              	100.00%
Bootstrap support for F7AR57 as seed ortholog is 100%.
Bootstrap support for H3CPZ8 as seed ortholog is 100%.

Group of orthologs #3637. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:205

F6PM95              	100.00%		Q4SUS0              	100.00%
Bootstrap support for F6PM95 as seed ortholog is 99%.
Bootstrap support for Q4SUS0 as seed ortholog is 100%.

Group of orthologs #3638. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

H2XNI6              	100.00%		H3CP02              	100.00%
Bootstrap support for H2XNI6 as seed ortholog is 100%.
Bootstrap support for H3CP02 as seed ortholog is 100%.

Group of orthologs #3639. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F7AIM1              	100.00%		H3D291              	100.00%
Bootstrap support for F7AIM1 as seed ortholog is 100%.
Bootstrap support for H3D291 as seed ortholog is 100%.

Group of orthologs #3640. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

F6Z235              	100.00%		H3DI59              	100.00%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for H3DI59 as seed ortholog is 100%.

Group of orthologs #3641. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

H2XNP3              	100.00%		H3D498              	100.00%
Bootstrap support for H2XNP3 as seed ortholog is 100%.
Bootstrap support for H3D498 as seed ortholog is 100%.

Group of orthologs #3642. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 T.nigroviridis:116

H2Y1W9              	100.00%		H3D9V2              	100.00%
Bootstrap support for H2Y1W9 as seed ortholog is 65%.
Alternative seed ortholog is F6YB82 (2 bits away from this cluster)
Bootstrap support for H3D9V2 as seed ortholog is 99%.

Group of orthologs #3643. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 T.nigroviridis:205

H2XVZ6              	100.00%		H3DL21              	100.00%
Bootstrap support for H2XVZ6 as seed ortholog is 100%.
Bootstrap support for H3DL21 as seed ortholog is 100%.

Group of orthologs #3644. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 T.nigroviridis:204

F6WHG5              	100.00%		H3DCF9              	100.00%
F6YX42              	22.73%		H3C0R8              	16.37%
                    	       		H3CM57              	8.82%
Bootstrap support for F6WHG5 as seed ortholog is 100%.
Bootstrap support for H3DCF9 as seed ortholog is 100%.

Group of orthologs #3645. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:28

F6VDE1              	100.00%		H3CPB9              	100.00%
                    	       		H3CYH6              	20.90%
                    	       		H3D534              	14.59%
Bootstrap support for F6VDE1 as seed ortholog is 92%.
Bootstrap support for H3CPB9 as seed ortholog is 73%.
Alternative seed ortholog is H3DG43 (28 bits away from this cluster)

Group of orthologs #3646. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 T.nigroviridis:71

F6T302              	100.00%		Q4T665              	100.00%
                    	       		Q4S0P5              	30.95%
                    	       		H3D3S3              	19.48%
Bootstrap support for F6T302 as seed ortholog is 55%.
Alternative seed ortholog is Q4H2S2 (38 bits away from this cluster)
Bootstrap support for Q4T665 as seed ortholog is 99%.

Group of orthologs #3647. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:204

H2Y3H7              	100.00%		H3CN04              	100.00%
                    	       		H3DEP1              	7.97%
Bootstrap support for H2Y3H7 as seed ortholog is 61%.
Alternative seed ortholog is F6TSW4 (12 bits away from this cluster)
Bootstrap support for H3CN04 as seed ortholog is 100%.

Group of orthologs #3648. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 T.nigroviridis:204

F6SWM7              	100.00%		H3CLX6              	100.00%
Bootstrap support for F6SWM7 as seed ortholog is 100%.
Bootstrap support for H3CLX6 as seed ortholog is 100%.

Group of orthologs #3649. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:204

F6V386              	100.00%		H3DJV2              	100.00%
Bootstrap support for F6V386 as seed ortholog is 98%.
Bootstrap support for H3DJV2 as seed ortholog is 100%.

Group of orthologs #3650. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 T.nigroviridis:204

H2XU65              	100.00%		H3CLJ2              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for H3CLJ2 as seed ortholog is 100%.

Group of orthologs #3651. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 T.nigroviridis:204

F6Y1Y0              	100.00%		Q4SWZ2              	100.00%
Bootstrap support for F6Y1Y0 as seed ortholog is 100%.
Bootstrap support for Q4SWZ2 as seed ortholog is 100%.

Group of orthologs #3652. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 T.nigroviridis:204

H2XKM5              	100.00%		Q4TAB3              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for Q4TAB3 as seed ortholog is 100%.

Group of orthologs #3653. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:203

Q4H3R5              	100.00%		H3CSD1              	100.00%
                    	       		H3DAQ2              	29.95%
Bootstrap support for Q4H3R5 as seed ortholog is 100%.
Bootstrap support for H3CSD1 as seed ortholog is 100%.

Group of orthologs #3654. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:203

H2XL14              	100.00%		H3DPU5              	100.00%
                    	       		H3CZN2              	12.23%
Bootstrap support for H2XL14 as seed ortholog is 100%.
Bootstrap support for H3DPU5 as seed ortholog is 100%.

Group of orthologs #3655. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:151

F7AM07              	100.00%		H3C6P7              	100.00%
Bootstrap support for F7AM07 as seed ortholog is 100%.
Bootstrap support for H3C6P7 as seed ortholog is 100%.

Group of orthologs #3656. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:203

F6Z0V4              	100.00%		H3CRF8              	100.00%
Bootstrap support for F6Z0V4 as seed ortholog is 100%.
Bootstrap support for H3CRF8 as seed ortholog is 100%.

Group of orthologs #3657. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:134

F6YF45              	100.00%		H3CXV5              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 100%.
Bootstrap support for H3CXV5 as seed ortholog is 100%.

Group of orthologs #3658. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 T.nigroviridis:125

F6SN27              	100.00%		H3DHK5              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for H3DHK5 as seed ortholog is 99%.

Group of orthologs #3659. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:55

F7BA12              	100.00%		H3CXW5              	100.00%
Bootstrap support for F7BA12 as seed ortholog is 96%.
Bootstrap support for H3CXW5 as seed ortholog is 98%.

Group of orthologs #3660. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:203

F6WG20              	100.00%		Q4RG57              	100.00%
Bootstrap support for F6WG20 as seed ortholog is 99%.
Bootstrap support for Q4RG57 as seed ortholog is 100%.

Group of orthologs #3661. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:126

F6QR63              	100.00%		H3CL01              	100.00%
                    	       		H3DD85              	11.01%
Bootstrap support for F6QR63 as seed ortholog is 100%.
Bootstrap support for H3CL01 as seed ortholog is 99%.

Group of orthologs #3662. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

H2XJJ8              	100.00%		H3DM38              	100.00%
                    	       		H3CNR1              	28.06%
Bootstrap support for H2XJJ8 as seed ortholog is 100%.
Bootstrap support for H3DM38 as seed ortholog is 100%.

Group of orthologs #3663. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

H2XKF1              	100.00%		Q4S8I7              	100.00%
                    	       		H3CWN7              	27.54%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for Q4S8I7 as seed ortholog is 100%.

Group of orthologs #3664. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

F6R0P0              	100.00%		H3BYH5              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for H3BYH5 as seed ortholog is 100%.

Group of orthologs #3665. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

F6S9I2              	100.00%		H3CQE4              	100.00%
Bootstrap support for F6S9I2 as seed ortholog is 100%.
Bootstrap support for H3CQE4 as seed ortholog is 100%.

Group of orthologs #3666. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

F6WIP7              	100.00%		H3CIA1              	100.00%
Bootstrap support for F6WIP7 as seed ortholog is 100%.
Bootstrap support for H3CIA1 as seed ortholog is 100%.

Group of orthologs #3667. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

F7AHQ4              	100.00%		H3CVX3              	100.00%
Bootstrap support for F7AHQ4 as seed ortholog is 100%.
Bootstrap support for H3CVX3 as seed ortholog is 100%.

Group of orthologs #3668. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

F6YNH3              	100.00%		H3D413              	100.00%
Bootstrap support for F6YNH3 as seed ortholog is 100%.
Bootstrap support for H3D413 as seed ortholog is 100%.

Group of orthologs #3669. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

H2XWR7              	100.00%		H3CGT3              	100.00%
Bootstrap support for H2XWR7 as seed ortholog is 100%.
Bootstrap support for H3CGT3 as seed ortholog is 100%.

Group of orthologs #3670. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

F6X073              	100.00%		Q4RGT2              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for Q4RGT2 as seed ortholog is 100%.

Group of orthologs #3671. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

H2Y296              	100.00%		H3CU24              	100.00%
Bootstrap support for H2Y296 as seed ortholog is 100%.
Bootstrap support for H3CU24 as seed ortholog is 100%.

Group of orthologs #3672. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

H2XK52              	100.00%		H3DPP9              	100.00%
Bootstrap support for H2XK52 as seed ortholog is 100%.
Bootstrap support for H3DPP9 as seed ortholog is 100%.

Group of orthologs #3673. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 T.nigroviridis:202

H2Y0K8              	100.00%		H3D8X1              	100.00%
Bootstrap support for H2Y0K8 as seed ortholog is 100%.
Bootstrap support for H3D8X1 as seed ortholog is 100%.

Group of orthologs #3674. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:105

F6T072              	100.00%		H3D7F0              	100.00%
F6T0A0              	45.67%		
F6T090              	36.61%		
H2XSN4              	8.56%		
H2XP60              	6.00%		
Bootstrap support for F6T072 as seed ortholog is 99%.
Bootstrap support for H3D7F0 as seed ortholog is 98%.

Group of orthologs #3675. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 T.nigroviridis:87

F6ZCN2              	100.00%		H3D4T7              	100.00%
H2XWF3              	33.69%		H3CN77              	50.41%
                    	       		H3C957              	45.90%
                    	       		H3D0N0              	41.12%
Bootstrap support for F6ZCN2 as seed ortholog is 64%.
Alternative seed ortholog is F7AXQ6 (13 bits away from this cluster)
Bootstrap support for H3D4T7 as seed ortholog is 99%.

Group of orthologs #3676. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

H2Y3Q9              	100.00%		H3DDQ7              	100.00%
                    	       		H3DDE6              	34.11%
                    	       		H3DPK0              	13.66%
Bootstrap support for H2Y3Q9 as seed ortholog is 100%.
Bootstrap support for H3DDQ7 as seed ortholog is 100%.

Group of orthologs #3677. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

H2XX64              	100.00%		H3D2M2              	100.00%
                    	       		H3CQT6              	37.82%
Bootstrap support for H2XX64 as seed ortholog is 100%.
Bootstrap support for H3D2M2 as seed ortholog is 100%.

Group of orthologs #3678. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6SY22              	100.00%		H3C4N8              	100.00%
Bootstrap support for F6SY22 as seed ortholog is 100%.
Bootstrap support for H3C4N8 as seed ortholog is 100%.

Group of orthologs #3679. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6QPL4              	100.00%		H3CLE3              	100.00%
Bootstrap support for F6QPL4 as seed ortholog is 100%.
Bootstrap support for H3CLE3 as seed ortholog is 100%.

Group of orthologs #3680. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6PHN6              	100.00%		H3CSZ7              	100.00%
Bootstrap support for F6PHN6 as seed ortholog is 100%.
Bootstrap support for H3CSZ7 as seed ortholog is 100%.

Group of orthologs #3681. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 T.nigroviridis:201

F6UW62              	100.00%		H3CEL5              	100.00%
Bootstrap support for F6UW62 as seed ortholog is 43%.
Alternative seed ortholog is H2Y3P5 (11 bits away from this cluster)
Bootstrap support for H3CEL5 as seed ortholog is 100%.

Group of orthologs #3682. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6YS50              	100.00%		H3C9V0              	100.00%
Bootstrap support for F6YS50 as seed ortholog is 100%.
Bootstrap support for H3C9V0 as seed ortholog is 100%.

Group of orthologs #3683. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:51

F6W7Y4              	100.00%		H3CME0              	100.00%
Bootstrap support for F6W7Y4 as seed ortholog is 100%.
Bootstrap support for H3CME0 as seed ortholog is 96%.

Group of orthologs #3684. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6QTI2              	100.00%		H3DBE9              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for H3DBE9 as seed ortholog is 100%.

Group of orthologs #3685. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6UTR1              	100.00%		H3D4R8              	100.00%
Bootstrap support for F6UTR1 as seed ortholog is 100%.
Bootstrap support for H3D4R8 as seed ortholog is 100%.

Group of orthologs #3686. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:108

F6QPQ3              	100.00%		H3DKS9              	100.00%
Bootstrap support for F6QPQ3 as seed ortholog is 100%.
Bootstrap support for H3DKS9 as seed ortholog is 99%.

Group of orthologs #3687. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:201

H2XRX1              	100.00%		H3CGU2              	100.00%
Bootstrap support for H2XRX1 as seed ortholog is 99%.
Bootstrap support for H3CGU2 as seed ortholog is 100%.

Group of orthologs #3688. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F6X4A0              	100.00%		H3DBC8              	100.00%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for H3DBC8 as seed ortholog is 100%.

Group of orthologs #3689. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

H2XSQ8              	100.00%		H3D8R5              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for H3D8R5 as seed ortholog is 100%.

Group of orthologs #3690. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

F7BK44              	100.00%		Q4RIE5              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for Q4RIE5 as seed ortholog is 100%.

Group of orthologs #3691. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

H2Y1D7              	100.00%		H3D6P3              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for H3D6P3 as seed ortholog is 100%.

Group of orthologs #3692. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 T.nigroviridis:201

Q8HIN6              	100.00%		Q4JQI4              	100.00%
Bootstrap support for Q8HIN6 as seed ortholog is 100%.
Bootstrap support for Q4JQI4 as seed ortholog is 100%.

Group of orthologs #3693. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:200

F6SQ79              	100.00%		H3CAI3              	100.00%
                    	       		H3DAP3              	5.66%
Bootstrap support for F6SQ79 as seed ortholog is 100%.
Bootstrap support for H3CAI3 as seed ortholog is 100%.

Group of orthologs #3694. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:63

F6T0P8              	100.00%		H3D5F0              	100.00%
                    	       		H3CP19              	34.94%
Bootstrap support for F6T0P8 as seed ortholog is 98%.
Bootstrap support for H3D5F0 as seed ortholog is 89%.

Group of orthologs #3695. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:72

H2XK44              	100.00%		H3CBV2              	100.00%
                    	       		H3DC56              	5.65%
Bootstrap support for H2XK44 as seed ortholog is 100%.
Bootstrap support for H3CBV2 as seed ortholog is 98%.

Group of orthologs #3696. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:148

F6SL18              	100.00%		H3C9Q6              	100.00%
Bootstrap support for F6SL18 as seed ortholog is 99%.
Bootstrap support for H3C9Q6 as seed ortholog is 100%.

Group of orthologs #3697. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:200

F6VG38              	100.00%		H3CG59              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 100%.
Bootstrap support for H3CG59 as seed ortholog is 100%.

Group of orthologs #3698. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:200

F6ZC01              	100.00%		H3CYY7              	100.00%
Bootstrap support for F6ZC01 as seed ortholog is 100%.
Bootstrap support for H3CYY7 as seed ortholog is 100%.

Group of orthologs #3699. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:21

F6XTS5              	100.00%		H3D589              	100.00%
Bootstrap support for F6XTS5 as seed ortholog is 92%.
Bootstrap support for H3D589 as seed ortholog is 70%.
Alternative seed ortholog is H3CQQ3 (21 bits away from this cluster)

Group of orthologs #3700. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:200

H2XZE9              	100.00%		H3C333              	100.00%
Bootstrap support for H2XZE9 as seed ortholog is 87%.
Bootstrap support for H3C333 as seed ortholog is 100%.

Group of orthologs #3701. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:200

F6SVP7              	100.00%		H3DMC6              	100.00%
Bootstrap support for F6SVP7 as seed ortholog is 100%.
Bootstrap support for H3DMC6 as seed ortholog is 100%.

Group of orthologs #3702. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 T.nigroviridis:138

Q1RPU6              	100.00%		Q4RHC2              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for Q4RHC2 as seed ortholog is 100%.

Group of orthologs #3703. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:199

F6QZG4              	100.00%		H3CH37              	100.00%
                    	       		H3CQ98              	26.48%
Bootstrap support for F6QZG4 as seed ortholog is 100%.
Bootstrap support for H3CH37 as seed ortholog is 100%.

Group of orthologs #3704. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:6

F7AU71              	100.00%		H3C9H3              	100.00%
                    	       		H3CIR1              	7.27%
Bootstrap support for F7AU71 as seed ortholog is 100%.
Bootstrap support for H3C9H3 as seed ortholog is 55%.
Alternative seed ortholog is H3CWL6 (6 bits away from this cluster)

Group of orthologs #3705. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:199

H2Y0R5              	100.00%		H3DHZ3              	100.00%
                    	       		H3DEQ1              	23.74%
Bootstrap support for H2Y0R5 as seed ortholog is 100%.
Bootstrap support for H3DHZ3 as seed ortholog is 100%.

Group of orthologs #3706. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:110

F6UB54              	100.00%		H3BZQ8              	100.00%
Bootstrap support for F6UB54 as seed ortholog is 100%.
Bootstrap support for H3BZQ8 as seed ortholog is 99%.

Group of orthologs #3707. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:199

F7AF59              	100.00%		H3CVK3              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for H3CVK3 as seed ortholog is 100%.

Group of orthologs #3708. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:199

F6UFW3              	100.00%		H3DIA9              	100.00%
Bootstrap support for F6UFW3 as seed ortholog is 100%.
Bootstrap support for H3DIA9 as seed ortholog is 100%.

Group of orthologs #3709. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:199

F6ZGV0              	100.00%		H3D981              	100.00%
Bootstrap support for F6ZGV0 as seed ortholog is 100%.
Bootstrap support for H3D981 as seed ortholog is 100%.

Group of orthologs #3710. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 T.nigroviridis:199

Q3MQ22              	100.00%		H3CI61              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for H3CI61 as seed ortholog is 100%.

Group of orthologs #3711. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:60

F6Y6P2              	100.00%		H3DD09              	100.00%
                    	       		H3CZB9              	60.80%
                    	       		H3DH11              	36.47%
                    	       		H3CVW2              	29.52%
                    	       		H3BX77              	24.61%
                    	       		H3D0C1              	5.96%
                    	       		H3CF81              	5.05%
Bootstrap support for F6Y6P2 as seed ortholog is 98%.
Bootstrap support for H3DD09 as seed ortholog is 83%.

Group of orthologs #3712. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:198

Q4H3N0              	100.00%		H3DF08              	100.00%
                    	       		H3CPK3              	13.18%
                    	       		H3C404              	5.08%
Bootstrap support for Q4H3N0 as seed ortholog is 100%.
Bootstrap support for H3DF08 as seed ortholog is 100%.

Group of orthologs #3713. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:80

F6RBZ6              	100.00%		H3DN47              	100.00%
                    	       		H3CVY4              	17.91%
Bootstrap support for F6RBZ6 as seed ortholog is 99%.
Bootstrap support for H3DN47 as seed ortholog is 97%.

Group of orthologs #3714. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:94

F7B9G3              	100.00%		H3DLM1              	100.00%
                    	       		H3DE46              	45.59%
Bootstrap support for F7B9G3 as seed ortholog is 100%.
Bootstrap support for H3DLM1 as seed ortholog is 97%.

Group of orthologs #3715. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:198

H2Y0C1              	100.00%		H3DN68              	100.00%
                    	       		H3D3M1              	17.98%
Bootstrap support for H2Y0C1 as seed ortholog is 100%.
Bootstrap support for H3DN68 as seed ortholog is 100%.

Group of orthologs #3716. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:198

F6RUV6              	100.00%		H3CDN0              	100.00%
Bootstrap support for F6RUV6 as seed ortholog is 100%.
Bootstrap support for H3CDN0 as seed ortholog is 100%.

Group of orthologs #3717. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:154

F6WHM9              	100.00%		H3CPK0              	100.00%
Bootstrap support for F6WHM9 as seed ortholog is 99%.
Bootstrap support for H3CPK0 as seed ortholog is 99%.

Group of orthologs #3718. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:134

F6ZG55              	100.00%		H3CVA8              	100.00%
Bootstrap support for F6ZG55 as seed ortholog is 99%.
Bootstrap support for H3CVA8 as seed ortholog is 99%.

Group of orthologs #3719. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:198

F6T8A4              	100.00%		H3DGT5              	100.00%
Bootstrap support for F6T8A4 as seed ortholog is 100%.
Bootstrap support for H3DGT5 as seed ortholog is 100%.

Group of orthologs #3720. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:16

F6RGJ1              	100.00%		Q4SVY4              	100.00%
Bootstrap support for F6RGJ1 as seed ortholog is 100%.
Bootstrap support for Q4SVY4 as seed ortholog is 72%.
Alternative seed ortholog is H3D9C0 (16 bits away from this cluster)

Group of orthologs #3721. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:150

F6U6C0              	100.00%		Q4RXL3              	100.00%
Bootstrap support for F6U6C0 as seed ortholog is 100%.
Bootstrap support for Q4RXL3 as seed ortholog is 100%.

Group of orthologs #3722. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:198

F7A102              	100.00%		H3DBJ4              	100.00%
Bootstrap support for F7A102 as seed ortholog is 100%.
Bootstrap support for H3DBJ4 as seed ortholog is 100%.

Group of orthologs #3723. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:198

F7ATN8              	100.00%		H3DH78              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 99%.
Bootstrap support for H3DH78 as seed ortholog is 100%.

Group of orthologs #3724. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:158

H2XVS4              	100.00%		H3DFY5              	100.00%
Bootstrap support for H2XVS4 as seed ortholog is 100%.
Bootstrap support for H3DFY5 as seed ortholog is 100%.

Group of orthologs #3725. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 T.nigroviridis:198

H2Y3T4              	100.00%		H3DII8              	100.00%
Bootstrap support for H2Y3T4 as seed ortholog is 100%.
Bootstrap support for H3DII8 as seed ortholog is 100%.

Group of orthologs #3726. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:126

Q8T893              	100.00%		H3DHX0              	100.00%
Bootstrap support for Q8T893 as seed ortholog is 100%.
Bootstrap support for H3DHX0 as seed ortholog is 100%.

Group of orthologs #3727. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

F6VIC3              	100.00%		H3D384              	100.00%
                    	       		H3DBL6              	19.31%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for H3D384 as seed ortholog is 100%.

Group of orthologs #3728. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

H2XLK9              	100.00%		H3CGW9              	100.00%
                    	       		H3CHX5              	9.02%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for H3CGW9 as seed ortholog is 100%.

Group of orthologs #3729. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

F6YV15              	100.00%		H3D626              	100.00%
                    	       		H3CV25              	30.53%
Bootstrap support for F6YV15 as seed ortholog is 100%.
Bootstrap support for H3D626 as seed ortholog is 100%.

Group of orthologs #3730. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:133

F6U1Q3              	100.00%		H3C5L9              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 100%.
Bootstrap support for H3C5L9 as seed ortholog is 100%.

Group of orthologs #3731. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

F6ZFY8              	100.00%		H3CPI0              	100.00%
Bootstrap support for F6ZFY8 as seed ortholog is 100%.
Bootstrap support for H3CPI0 as seed ortholog is 100%.

Group of orthologs #3732. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

F6SAX8              	100.00%		Q4RR83              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for Q4RR83 as seed ortholog is 100%.

Group of orthologs #3733. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:56

H2XYF5              	100.00%		H3CAY0              	100.00%
Bootstrap support for H2XYF5 as seed ortholog is 100%.
Bootstrap support for H3CAY0 as seed ortholog is 99%.

Group of orthologs #3734. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:20

F6VYL7              	100.00%		H3DIS0              	100.00%
Bootstrap support for F6VYL7 as seed ortholog is 100%.
Bootstrap support for H3DIS0 as seed ortholog is 70%.
Alternative seed ortholog is H3CP36 (20 bits away from this cluster)

Group of orthologs #3735. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

H2Y1Y8              	100.00%		H3D928              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for H3D928 as seed ortholog is 100%.

Group of orthologs #3736. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

H2Y320              	100.00%		H3DEN1              	100.00%
Bootstrap support for H2Y320 as seed ortholog is 100%.
Bootstrap support for H3DEN1 as seed ortholog is 100%.

Group of orthologs #3737. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 T.nigroviridis:197

H2Y1H3              	100.00%		Q4SRH2              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for Q4SRH2 as seed ortholog is 100%.

Group of orthologs #3738. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:65

F7A1E5              	100.00%		H3DAG2              	100.00%
                    	       		H3CDB6              	22.85%
                    	       		H3BZS5              	17.31%
                    	       		H3CJ37              	17.31%
                    	       		H3CKC6              	16.07%
                    	       		H3BY63              	15.37%
                    	       		H3C1H2              	7.89%
Bootstrap support for F7A1E5 as seed ortholog is 100%.
Bootstrap support for H3DAG2 as seed ortholog is 98%.

Group of orthologs #3739. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:196

F6WIN9              	100.00%		H3CWH5              	100.00%
                    	       		H3D2Z4              	72.04%
                    	       		H3D0S0              	29.86%
                    	       		H3DPL2              	11.37%
Bootstrap support for F6WIN9 as seed ortholog is 100%.
Bootstrap support for H3CWH5 as seed ortholog is 100%.

Group of orthologs #3740. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:109

F6W6Z9              	100.00%		H3D1L1              	100.00%
F6VT59              	11.19%		H3DES6              	100.00%
                    	       		H3C3Q0              	6.67%
Bootstrap support for F6W6Z9 as seed ortholog is 100%.
Bootstrap support for H3D1L1 as seed ortholog is 100%.
Bootstrap support for H3DES6 as seed ortholog is 100%.

Group of orthologs #3741. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 T.nigroviridis:31

F6R955              	100.00%		H3DN19              	100.00%
                    	       		H3DQ67              	12.90%
                    	       		H3DAR2              	7.83%
Bootstrap support for F6R955 as seed ortholog is 98%.
Bootstrap support for H3DN19 as seed ortholog is 94%.

Group of orthologs #3742. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:196

Q4H3D9              	100.00%		H3CSR2              	100.00%
                    	       		H3CZ58              	15.92%
Bootstrap support for Q4H3D9 as seed ortholog is 100%.
Bootstrap support for H3CSR2 as seed ortholog is 100%.

Group of orthologs #3743. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:31

H2XTV2              	100.00%		H3DC43              	100.00%
                    	       		H3D0D3              	19.62%
Bootstrap support for H2XTV2 as seed ortholog is 100%.
Bootstrap support for H3DC43 as seed ortholog is 92%.

Group of orthologs #3744. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:196

H2XQG7              	100.00%		H3C428              	100.00%
Bootstrap support for H2XQG7 as seed ortholog is 100%.
Bootstrap support for H3C428 as seed ortholog is 100%.

Group of orthologs #3745. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:139

F6ZIC6              	100.00%		H3CQ36              	100.00%
Bootstrap support for F6ZIC6 as seed ortholog is 99%.
Bootstrap support for H3CQ36 as seed ortholog is 100%.

Group of orthologs #3746. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:196

F6SD85              	100.00%		Q4S824              	100.00%
Bootstrap support for F6SD85 as seed ortholog is 100%.
Bootstrap support for Q4S824 as seed ortholog is 100%.

Group of orthologs #3747. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:196

H2XJI9              	100.00%		H3D5B1              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for H3D5B1 as seed ortholog is 100%.

Group of orthologs #3748. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 T.nigroviridis:15

F6Z156              	100.00%		H3DMC4              	100.00%
Bootstrap support for F6Z156 as seed ortholog is 96%.
Bootstrap support for H3DMC4 as seed ortholog is 72%.
Alternative seed ortholog is H3CBZ9 (15 bits away from this cluster)

Group of orthologs #3749. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:196

H2XX71              	100.00%		H3DGY7              	100.00%
Bootstrap support for H2XX71 as seed ortholog is 99%.
Bootstrap support for H3DGY7 as seed ortholog is 100%.

Group of orthologs #3750. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 T.nigroviridis:196

H2XR58              	100.00%		Q4SEJ1              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for Q4SEJ1 as seed ortholog is 100%.

Group of orthologs #3751. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:57

F7B7S8              	100.00%		H3CIH9              	100.00%
F6SYR3              	9.58%		
Bootstrap support for F7B7S8 as seed ortholog is 93%.
Bootstrap support for H3CIH9 as seed ortholog is 95%.

Group of orthologs #3752. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

F6QWU8              	100.00%		H3D035              	100.00%
Bootstrap support for F6QWU8 as seed ortholog is 100%.
Bootstrap support for H3D035 as seed ortholog is 100%.

Group of orthologs #3753. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

F6XC20              	100.00%		H3CR67              	100.00%
Bootstrap support for F6XC20 as seed ortholog is 100%.
Bootstrap support for H3CR67 as seed ortholog is 100%.

Group of orthologs #3754. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

F6PK60              	100.00%		Q4STS2              	100.00%
Bootstrap support for F6PK60 as seed ortholog is 100%.
Bootstrap support for Q4STS2 as seed ortholog is 100%.

Group of orthologs #3755. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

H2XPT3              	100.00%		H3CQY0              	100.00%
Bootstrap support for H2XPT3 as seed ortholog is 100%.
Bootstrap support for H3CQY0 as seed ortholog is 100%.

Group of orthologs #3756. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

F6XTZ6              	100.00%		H3DM11              	100.00%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for H3DM11 as seed ortholog is 100%.

Group of orthologs #3757. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

F6XUK1              	100.00%		Q4RQV3              	100.00%
Bootstrap support for F6XUK1 as seed ortholog is 100%.
Bootstrap support for Q4RQV3 as seed ortholog is 100%.

Group of orthologs #3758. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

F6XIZ4              	100.00%		Q4S6P9              	100.00%
Bootstrap support for F6XIZ4 as seed ortholog is 100%.
Bootstrap support for Q4S6P9 as seed ortholog is 100%.

Group of orthologs #3759. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 T.nigroviridis:195

H2XNC6              	100.00%		Q4SFG3              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for Q4SFG3 as seed ortholog is 100%.

Group of orthologs #3760. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 T.nigroviridis:18

H2XNM8              	100.00%		H3D158              	100.00%
H2Y099              	100.00%		H3DMP9              	100.00%
H2Y3J7              	41.54%		H3CB18              	43.53%
                    	       		H3BXE3              	16.09%
                    	       		H3DCM2              	12.93%
                    	       		H3C480              	7.81%
Bootstrap support for H2XNM8 as seed ortholog is 62%.
Alternative seed ortholog is F6QHU8 (13 bits away from this cluster)
Bootstrap support for H2Y099 as seed ortholog is 60%.
Alternative seed ortholog is F6QHU8 (13 bits away from this cluster)
Bootstrap support for H3D158 as seed ortholog is 69%.
Alternative seed ortholog is H3DP30 (18 bits away from this cluster)
Bootstrap support for H3DMP9 as seed ortholog is 65%.
Alternative seed ortholog is H3DP30 (18 bits away from this cluster)

Group of orthologs #3761. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:98

F6XIJ2              	100.00%		H3CFZ0              	100.00%
Q869J2              	15.90%		H3CHD7              	45.93%
F6XIM3              	15.49%		H3D2X0              	20.93%
                    	       		Q3LG37              	19.63%
Bootstrap support for F6XIJ2 as seed ortholog is 99%.
Bootstrap support for H3CFZ0 as seed ortholog is 99%.

Group of orthologs #3762. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 T.nigroviridis:30

F7AJG5              	100.00%		Q4SEW3              	100.00%
                    	       		Q4SEW1              	63.29%
                    	       		H3DM98              	36.16%
Bootstrap support for F7AJG5 as seed ortholog is 78%.
Bootstrap support for Q4SEW3 as seed ortholog is 80%.

Group of orthologs #3763. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:194

H2Y2B7              	100.00%		H3DEM8              	100.00%
                    	       		H3CSY9              	24.85%
                    	       		H3CLS7              	24.52%
Bootstrap support for H2Y2B7 as seed ortholog is 100%.
Bootstrap support for H3DEM8 as seed ortholog is 100%.

Group of orthologs #3764. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:194

F6WJM1              	100.00%		H3CX97              	100.00%
Bootstrap support for F6WJM1 as seed ortholog is 100%.
Bootstrap support for H3CX97 as seed ortholog is 100%.

Group of orthologs #3765. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:194

F6VNQ5              	100.00%		H3D258              	100.00%
Bootstrap support for F6VNQ5 as seed ortholog is 99%.
Bootstrap support for H3D258 as seed ortholog is 100%.

Group of orthologs #3766. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:194

F6Z5D4              	100.00%		H3CUE9              	100.00%
Bootstrap support for F6Z5D4 as seed ortholog is 100%.
Bootstrap support for H3CUE9 as seed ortholog is 100%.

Group of orthologs #3767. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:100

F6YWK0              	100.00%		H3DJW9              	100.00%
Bootstrap support for F6YWK0 as seed ortholog is 100%.
Bootstrap support for H3DJW9 as seed ortholog is 100%.

Group of orthologs #3768. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:113

H2XTM5              	100.00%		H3CY37              	100.00%
Bootstrap support for H2XTM5 as seed ortholog is 100%.
Bootstrap support for H3CY37 as seed ortholog is 99%.

Group of orthologs #3769. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 T.nigroviridis:194

F7B404              	100.00%		H3DLC0              	100.00%
Bootstrap support for F7B404 as seed ortholog is 100%.
Bootstrap support for H3DLC0 as seed ortholog is 100%.

Group of orthologs #3770. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:108

F6TXM9              	100.00%		H3DF74              	100.00%
                    	       		H3DLQ3              	63.38%
                    	       		H3DC28              	59.62%
                    	       		H3CTR2              	52.58%
Bootstrap support for F6TXM9 as seed ortholog is 99%.
Bootstrap support for H3DF74 as seed ortholog is 99%.

Group of orthologs #3771. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:83

F6WHA2              	100.00%		H3DHI2              	100.00%
                    	       		H3DC08              	37.06%
                    	       		H3CM92              	25.56%
Bootstrap support for F6WHA2 as seed ortholog is 99%.
Bootstrap support for H3DHI2 as seed ortholog is 99%.

Group of orthologs #3772. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:32

F6SBE5              	100.00%		H3C1U8              	100.00%
                    	       		H3DJX5              	24.21%
Bootstrap support for F6SBE5 as seed ortholog is 77%.
Bootstrap support for H3C1U8 as seed ortholog is 73%.
Alternative seed ortholog is H3C4C8 (32 bits away from this cluster)

Group of orthologs #3773. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6ZRJ2              	100.00%		H3C1R7              	100.00%
                    	       		H3DIY2              	17.81%
Bootstrap support for F6ZRJ2 as seed ortholog is 100%.
Bootstrap support for H3C1R7 as seed ortholog is 100%.

Group of orthologs #3774. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6V2L0              	100.00%		H3DJL7              	100.00%
                    	       		H3DEF7              	20.50%
Bootstrap support for F6V2L0 as seed ortholog is 100%.
Bootstrap support for H3DJL7 as seed ortholog is 100%.

Group of orthologs #3775. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6QFI4              	100.00%		H3BXQ7              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for H3BXQ7 as seed ortholog is 100%.

Group of orthologs #3776. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6T485              	100.00%		H3CWU9              	100.00%
Bootstrap support for F6T485 as seed ortholog is 100%.
Bootstrap support for H3CWU9 as seed ortholog is 100%.

Group of orthologs #3777. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:106

F6RN78              	100.00%		H3D7P2              	100.00%
Bootstrap support for F6RN78 as seed ortholog is 99%.
Bootstrap support for H3D7P2 as seed ortholog is 100%.

Group of orthologs #3778. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6WUB5              	100.00%		H3D1Y0              	100.00%
Bootstrap support for F6WUB5 as seed ortholog is 100%.
Bootstrap support for H3D1Y0 as seed ortholog is 100%.

Group of orthologs #3779. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6U3G5              	100.00%		H3DMK5              	100.00%
Bootstrap support for F6U3G5 as seed ortholog is 100%.
Bootstrap support for H3DMK5 as seed ortholog is 100%.

Group of orthologs #3780. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:44

H2XJV4              	100.00%		H3D2Q7              	100.00%
Bootstrap support for H2XJV4 as seed ortholog is 98%.
Bootstrap support for H3D2Q7 as seed ortholog is 84%.

Group of orthologs #3781. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

F6WNU7              	100.00%		Q4RTA0              	100.00%
Bootstrap support for F6WNU7 as seed ortholog is 100%.
Bootstrap support for Q4RTA0 as seed ortholog is 100%.

Group of orthologs #3782. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:193

H2XLD2              	100.00%		H3D8R3              	100.00%
Bootstrap support for H2XLD2 as seed ortholog is 79%.
Bootstrap support for H3D8R3 as seed ortholog is 100%.

Group of orthologs #3783. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 T.nigroviridis:193

H2XUI3              	100.00%		H3D996              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for H3D996 as seed ortholog is 100%.

Group of orthologs #3784. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 T.nigroviridis:192

F6RST4              	100.00%		H3CQ24              	100.00%
                    	       		H3D1B7              	7.58%
Bootstrap support for F6RST4 as seed ortholog is 100%.
Bootstrap support for H3CQ24 as seed ortholog is 100%.

Group of orthologs #3785. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 T.nigroviridis:135

F6ZBW6              	100.00%		H3D3M9              	100.00%
                    	       		H3D1E2              	7.14%
Bootstrap support for F6ZBW6 as seed ortholog is 100%.
Bootstrap support for H3D3M9 as seed ortholog is 99%.

Group of orthologs #3786. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:98

F6VYY1              	100.00%		H3DAA9              	100.00%
Bootstrap support for F6VYY1 as seed ortholog is 99%.
Bootstrap support for H3DAA9 as seed ortholog is 99%.

Group of orthologs #3787. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 T.nigroviridis:192

F6SU13              	100.00%		Q4RJZ1              	100.00%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for Q4RJZ1 as seed ortholog is 100%.

Group of orthologs #3788. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 T.nigroviridis:192

H2XM97              	100.00%		Q4S7N0              	100.00%
Bootstrap support for H2XM97 as seed ortholog is 100%.
Bootstrap support for Q4S7N0 as seed ortholog is 100%.

Group of orthologs #3789. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:115

H2XLQ3              	100.00%		H3D199              	100.00%
                    	       		H3CWQ2              	40.10%
Bootstrap support for H2XLQ3 as seed ortholog is 100%.
Bootstrap support for H3D199 as seed ortholog is 99%.

Group of orthologs #3790. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:60

F6YSA0              	100.00%		Q4TC84              	100.00%
                    	       		Q4S5I9              	90.98%
Bootstrap support for F6YSA0 as seed ortholog is 95%.
Bootstrap support for Q4TC84 as seed ortholog is 99%.

Group of orthologs #3791. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:101

F6QAF5              	100.00%		H3CGF0              	100.00%
Bootstrap support for F6QAF5 as seed ortholog is 99%.
Bootstrap support for H3CGF0 as seed ortholog is 98%.

Group of orthologs #3792. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:191

F6V9L7              	100.00%		H3CE36              	100.00%
Bootstrap support for F6V9L7 as seed ortholog is 100%.
Bootstrap support for H3CE36 as seed ortholog is 100%.

Group of orthologs #3793. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:191

F6RKI1              	100.00%		H3D2K5              	100.00%
Bootstrap support for F6RKI1 as seed ortholog is 100%.
Bootstrap support for H3D2K5 as seed ortholog is 100%.

Group of orthologs #3794. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:191

F6RSF3              	100.00%		H3DBR8              	100.00%
Bootstrap support for F6RSF3 as seed ortholog is 100%.
Bootstrap support for H3DBR8 as seed ortholog is 100%.

Group of orthologs #3795. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:191

F6WC79              	100.00%		H3CZ30              	100.00%
Bootstrap support for F6WC79 as seed ortholog is 100%.
Bootstrap support for H3CZ30 as seed ortholog is 100%.

Group of orthologs #3796. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:191

F6PNP3              	100.00%		Q4T4J9              	100.00%
Bootstrap support for F6PNP3 as seed ortholog is 100%.
Bootstrap support for Q4T4J9 as seed ortholog is 100%.

Group of orthologs #3797. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:46

H2Y3K2              	100.00%		H3D9K4              	100.00%
Bootstrap support for H2Y3K2 as seed ortholog is 100%.
Bootstrap support for H3D9K4 as seed ortholog is 99%.

Group of orthologs #3798. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 T.nigroviridis:191

Q4H2R5              	100.00%		Q4SLF5              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for Q4SLF5 as seed ortholog is 100%.

Group of orthologs #3799. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:18

F6ULU6              	100.00%		H3CX04              	100.00%
H2XZ40              	31.88%		H3D7T3              	62.40%
F7AP79              	14.56%		H3CXU9              	42.06%
                    	       		H3CHE7              	11.86%
Bootstrap support for F6ULU6 as seed ortholog is 100%.
Bootstrap support for H3CX04 as seed ortholog is 69%.
Alternative seed ortholog is H3CCN8 (18 bits away from this cluster)

Group of orthologs #3800. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

F7AMZ2              	100.00%		H3CXC9              	100.00%
F6SWC9              	5.77%		H3CIG4              	43.15%
Bootstrap support for F7AMZ2 as seed ortholog is 100%.
Bootstrap support for H3CXC9 as seed ortholog is 100%.

Group of orthologs #3801. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 T.nigroviridis:21

F6SDR2              	100.00%		H3CE38              	100.00%
                    	       		H3CZZ6              	8.11%
Bootstrap support for F6SDR2 as seed ortholog is 78%.
Bootstrap support for H3CE38 as seed ortholog is 71%.
Alternative seed ortholog is H3DFI7 (21 bits away from this cluster)

Group of orthologs #3802. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

F6U3K8              	100.00%		H3BYN2              	100.00%
Bootstrap support for F6U3K8 as seed ortholog is 100%.
Bootstrap support for H3BYN2 as seed ortholog is 100%.

Group of orthologs #3803. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:99

F7BHB8              	100.00%		H3C8P8              	100.00%
Bootstrap support for F7BHB8 as seed ortholog is 100%.
Bootstrap support for H3C8P8 as seed ortholog is 99%.

Group of orthologs #3804. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

H2XW33              	100.00%		H3CAY8              	100.00%
Bootstrap support for H2XW33 as seed ortholog is 100%.
Bootstrap support for H3CAY8 as seed ortholog is 100%.

Group of orthologs #3805. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

F6ZLY9              	100.00%		H3D247              	100.00%
Bootstrap support for F6ZLY9 as seed ortholog is 100%.
Bootstrap support for H3D247 as seed ortholog is 100%.

Group of orthologs #3806. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:190

F6ZLL7              	100.00%		H3D744              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for H3D744 as seed ortholog is 100%.

Group of orthologs #3807. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:61

F6V0W8              	100.00%		Q4RYJ6              	100.00%
Bootstrap support for F6V0W8 as seed ortholog is 96%.
Bootstrap support for Q4RYJ6 as seed ortholog is 98%.

Group of orthologs #3808. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

H2XM38              	100.00%		H3DHX5              	100.00%
Bootstrap support for H2XM38 as seed ortholog is 100%.
Bootstrap support for H3DHX5 as seed ortholog is 100%.

Group of orthologs #3809. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

H2Y013              	100.00%		H3D7L4              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for H3D7L4 as seed ortholog is 100%.

Group of orthologs #3810. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

H2XRI7              	100.00%		Q4RJS7              	100.00%
Bootstrap support for H2XRI7 as seed ortholog is 100%.
Bootstrap support for Q4RJS7 as seed ortholog is 100%.

Group of orthologs #3811. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 T.nigroviridis:190

H2XYG3              	100.00%		Q4SKF6              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for Q4SKF6 as seed ortholog is 100%.

Group of orthologs #3812. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:189

H2XMY6              	100.00%		Q804S2              	100.00%
                    	       		H3DIM4              	36.13%
                    	       		H3CQN3              	17.39%
Bootstrap support for H2XMY6 as seed ortholog is 82%.
Bootstrap support for Q804S2 as seed ortholog is 100%.

Group of orthologs #3813. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 T.nigroviridis:189

F6RGB2              	100.00%		H3CUX7              	100.00%
                    	       		H3CER4              	24.55%
Bootstrap support for F6RGB2 as seed ortholog is 100%.
Bootstrap support for H3CUX7 as seed ortholog is 100%.

Group of orthologs #3814. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:189

F6PRU7              	100.00%		H3DQ24              	100.00%
H2Y0G4              	32.74%		
Bootstrap support for F6PRU7 as seed ortholog is 99%.
Bootstrap support for H3DQ24 as seed ortholog is 100%.

Group of orthologs #3815. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 T.nigroviridis:78

F6Q249              	100.00%		H3C6R0              	100.00%
Bootstrap support for F6Q249 as seed ortholog is 100%.
Bootstrap support for H3C6R0 as seed ortholog is 94%.

Group of orthologs #3816. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:189

F6SBJ2              	100.00%		H3DDF7              	100.00%
Bootstrap support for F6SBJ2 as seed ortholog is 96%.
Bootstrap support for H3DDF7 as seed ortholog is 100%.

Group of orthologs #3817. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:118

F6V449              	100.00%		H3DIH1              	100.00%
Bootstrap support for F6V449 as seed ortholog is 99%.
Bootstrap support for H3DIH1 as seed ortholog is 99%.

Group of orthologs #3818. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 T.nigroviridis:189

H2Y1S1              	100.00%		H3DDN4              	100.00%
Bootstrap support for H2Y1S1 as seed ortholog is 100%.
Bootstrap support for H3DDN4 as seed ortholog is 100%.

Group of orthologs #3819. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:22

H2XYT9              	100.00%		H3CE61              	100.00%
                    	       		H3CVY9              	100.00%
                    	       		H3BY14              	53.30%
                    	       		H3C1N0              	48.24%
                    	       		H3CZ60              	30.84%
                    	       		H3DCZ9              	30.84%
                    	       		H3CUT8              	16.08%
Bootstrap support for H2XYT9 as seed ortholog is 66%.
Alternative seed ortholog is H2XLB2 (19 bits away from this cluster)
Bootstrap support for H3CE61 as seed ortholog is 71%.
Alternative seed ortholog is H3D5E2 (22 bits away from this cluster)
Bootstrap support for H3CVY9 as seed ortholog is 74%.
Alternative seed ortholog is H3D5E2 (22 bits away from this cluster)

Group of orthologs #3820. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:52

F7A8Z2              	100.00%		H3CQ72              	100.00%
F6Y1V1              	33.94%		H3CR32              	57.21%
Bootstrap support for F7A8Z2 as seed ortholog is 99%.
Bootstrap support for H3CQ72 as seed ortholog is 93%.

Group of orthologs #3821. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F6QRZ2              	100.00%		H3C4Q1              	100.00%
                    	       		H3DH21              	30.43%
Bootstrap support for F6QRZ2 as seed ortholog is 100%.
Bootstrap support for H3C4Q1 as seed ortholog is 100%.

Group of orthologs #3822. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F7A410              	100.00%		H3CS74              	100.00%
                    	       		H3D230              	62.54%
Bootstrap support for F7A410 as seed ortholog is 100%.
Bootstrap support for H3CS74 as seed ortholog is 100%.

Group of orthologs #3823. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

H2XLG0              	100.00%		H3CRT3              	100.00%
                    	       		H3D9G5              	28.45%
Bootstrap support for H2XLG0 as seed ortholog is 100%.
Bootstrap support for H3CRT3 as seed ortholog is 100%.

Group of orthologs #3824. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:80

H2XTZ2              	100.00%		H3D018              	100.00%
H2Y0M5              	35.57%		
Bootstrap support for H2XTZ2 as seed ortholog is 80%.
Bootstrap support for H3D018 as seed ortholog is 98%.

Group of orthologs #3825. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F6S0N6              	100.00%		H3C5S9              	100.00%
Bootstrap support for F6S0N6 as seed ortholog is 100%.
Bootstrap support for H3C5S9 as seed ortholog is 100%.

Group of orthologs #3826. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:31

F6TTX9              	100.00%		H3CAF2              	100.00%
Bootstrap support for F6TTX9 as seed ortholog is 99%.
Bootstrap support for H3CAF2 as seed ortholog is 82%.

Group of orthologs #3827. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:47

F6W4Z8              	100.00%		H3C5A4              	100.00%
Bootstrap support for F6W4Z8 as seed ortholog is 100%.
Bootstrap support for H3C5A4 as seed ortholog is 97%.

Group of orthologs #3828. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:144

F6X986              	100.00%		H3C295              	100.00%
Bootstrap support for F6X986 as seed ortholog is 98%.
Bootstrap support for H3C295 as seed ortholog is 100%.

Group of orthologs #3829. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F6SJ18              	100.00%		H3CTW5              	100.00%
Bootstrap support for F6SJ18 as seed ortholog is 100%.
Bootstrap support for H3CTW5 as seed ortholog is 100%.

Group of orthologs #3830. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F6VKK3              	100.00%		H3CWP7              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for H3CWP7 as seed ortholog is 100%.

Group of orthologs #3831. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:108

F7B349              	100.00%		H3CLH9              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for H3CLH9 as seed ortholog is 99%.

Group of orthologs #3832. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F7B819              	100.00%		H3CMH8              	100.00%
Bootstrap support for F7B819 as seed ortholog is 100%.
Bootstrap support for H3CMH8 as seed ortholog is 100%.

Group of orthologs #3833. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F6S4Y6              	100.00%		Q4SYR0              	100.00%
Bootstrap support for F6S4Y6 as seed ortholog is 100%.
Bootstrap support for Q4SYR0 as seed ortholog is 100%.

Group of orthologs #3834. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:122

H2XVQ8              	100.00%		H3CK23              	100.00%
Bootstrap support for H2XVQ8 as seed ortholog is 100%.
Bootstrap support for H3CK23 as seed ortholog is 99%.

Group of orthologs #3835. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

F6XGB5              	100.00%		Q4S9H5              	100.00%
Bootstrap support for F6XGB5 as seed ortholog is 100%.
Bootstrap support for Q4S9H5 as seed ortholog is 100%.

Group of orthologs #3836. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

H2XPG9              	100.00%		H3DAA8              	100.00%
Bootstrap support for H2XPG9 as seed ortholog is 100%.
Bootstrap support for H3DAA8 as seed ortholog is 100%.

Group of orthologs #3837. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

H2XYK8              	100.00%		H3D0Q0              	100.00%
Bootstrap support for H2XYK8 as seed ortholog is 100%.
Bootstrap support for H3D0Q0 as seed ortholog is 100%.

Group of orthologs #3838. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

H2Y2U3              	100.00%		H3CVI5              	100.00%
Bootstrap support for H2Y2U3 as seed ortholog is 100%.
Bootstrap support for H3CVI5 as seed ortholog is 100%.

Group of orthologs #3839. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

H2XTF1              	100.00%		H3DEN0              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for H3DEN0 as seed ortholog is 100%.

Group of orthologs #3840. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 T.nigroviridis:188

H2Y3G2              	100.00%		H3DPT1              	100.00%
Bootstrap support for H2Y3G2 as seed ortholog is 100%.
Bootstrap support for H3DPT1 as seed ortholog is 100%.

Group of orthologs #3841. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:23

F6PH17              	100.00%		Q4SGB7              	100.00%
                    	       		H3CGW1              	21.00%
                    	       		H3D015              	11.44%
                    	       		H3DFT1              	11.29%
                    	       		H3D3R1              	10.66%
                    	       		H3CXH5              	7.52%
Bootstrap support for F6PH17 as seed ortholog is 99%.
Bootstrap support for Q4SGB7 as seed ortholog is 76%.

Group of orthologs #3842. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

A8WHA5              	100.00%		H3C7C7              	100.00%
Bootstrap support for A8WHA5 as seed ortholog is 100%.
Bootstrap support for H3C7C7 as seed ortholog is 100%.

Group of orthologs #3843. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:74

F6SV73              	100.00%		H3CC61              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for H3CC61 as seed ortholog is 99%.

Group of orthologs #3844. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

F6W6Z3              	100.00%		H3CBD8              	100.00%
Bootstrap support for F6W6Z3 as seed ortholog is 100%.
Bootstrap support for H3CBD8 as seed ortholog is 100%.

Group of orthologs #3845. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

F6Z897              	100.00%		H3C3E9              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for H3C3E9 as seed ortholog is 100%.

Group of orthologs #3846. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

F6YW41              	100.00%		H3CUP3              	100.00%
Bootstrap support for F6YW41 as seed ortholog is 100%.
Bootstrap support for H3CUP3 as seed ortholog is 100%.

Group of orthologs #3847. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

H2XQJ8              	100.00%		H3CAD8              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for H3CAD8 as seed ortholog is 100%.

Group of orthologs #3848. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:124

F6U189              	100.00%		Q4SJ51              	100.00%
Bootstrap support for F6U189 as seed ortholog is 96%.
Bootstrap support for Q4SJ51 as seed ortholog is 100%.

Group of orthologs #3849. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

H2XRC4              	100.00%		H3CU38              	100.00%
Bootstrap support for H2XRC4 as seed ortholog is 100%.
Bootstrap support for H3CU38 as seed ortholog is 100%.

Group of orthologs #3850. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 T.nigroviridis:187

F7A0D6              	100.00%		H3DGU8              	100.00%
Bootstrap support for F7A0D6 as seed ortholog is 100%.
Bootstrap support for H3DGU8 as seed ortholog is 100%.

Group of orthologs #3851. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:135

H2XXW6              	100.00%		Q4S7D6              	100.00%
Bootstrap support for H2XXW6 as seed ortholog is 89%.
Bootstrap support for Q4S7D6 as seed ortholog is 100%.

Group of orthologs #3852. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:108

H2XKU8              	100.00%		H3BYB5              	100.00%
                    	       		H3C4T8              	39.39%
                    	       		H3DI69              	35.54%
                    	       		Q4T0U1              	24.52%
                    	       		H3CN23              	8.82%
                    	       		H3DMM0              	8.82%
                    	       		H3D5H4              	7.99%
                    	       		H3DAC5              	7.99%
                    	       		H3DAC3              	7.99%
                    	       		H3CYJ7              	5.23%
Bootstrap support for H2XKU8 as seed ortholog is 98%.
Bootstrap support for H3BYB5 as seed ortholog is 99%.

Group of orthologs #3853. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

F6U6A2              	100.00%		H3CG47              	100.00%
                    	       		H3D6R3              	23.30%
Bootstrap support for F6U6A2 as seed ortholog is 100%.
Bootstrap support for H3CG47 as seed ortholog is 100%.

Group of orthologs #3854. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

F6TJ37              	100.00%		H3DGJ2              	100.00%
                    	       		H3C125              	18.15%
Bootstrap support for F6TJ37 as seed ortholog is 100%.
Bootstrap support for H3DGJ2 as seed ortholog is 100%.

Group of orthologs #3855. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:136

F6SQS1              	100.00%		Q4S239              	100.00%
                    	       		H3DEH2              	12.92%
Bootstrap support for F6SQS1 as seed ortholog is 100%.
Bootstrap support for Q4S239 as seed ortholog is 100%.

Group of orthologs #3856. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

F6QE53              	100.00%		H3DFE0              	100.00%
Bootstrap support for F6QE53 as seed ortholog is 100%.
Bootstrap support for H3DFE0 as seed ortholog is 100%.

Group of orthologs #3857. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

H2XXZ1              	100.00%		H3CBJ3              	100.00%
Bootstrap support for H2XXZ1 as seed ortholog is 100%.
Bootstrap support for H3CBJ3 as seed ortholog is 100%.

Group of orthologs #3858. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

F6YUZ1              	100.00%		H3D9U7              	100.00%
Bootstrap support for F6YUZ1 as seed ortholog is 100%.
Bootstrap support for H3D9U7 as seed ortholog is 100%.

Group of orthologs #3859. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

H2Y0H4              	100.00%		H3CD23              	100.00%
Bootstrap support for H2Y0H4 as seed ortholog is 100%.
Bootstrap support for H3CD23 as seed ortholog is 100%.

Group of orthologs #3860. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

H2XLX9              	100.00%		H3CZV3              	100.00%
Bootstrap support for H2XLX9 as seed ortholog is 100%.
Bootstrap support for H3CZV3 as seed ortholog is 100%.

Group of orthologs #3861. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

H2XS17              	100.00%		H3CST6              	100.00%
Bootstrap support for H2XS17 as seed ortholog is 100%.
Bootstrap support for H3CST6 as seed ortholog is 100%.

Group of orthologs #3862. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

F6UQ68              	100.00%		Q4S1W1              	100.00%
Bootstrap support for F6UQ68 as seed ortholog is 100%.
Bootstrap support for Q4S1W1 as seed ortholog is 100%.

Group of orthologs #3863. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 T.nigroviridis:186

H2Y1A0              	100.00%		H3DN55              	100.00%
Bootstrap support for H2Y1A0 as seed ortholog is 100%.
Bootstrap support for H3DN55 as seed ortholog is 100%.

Group of orthologs #3864. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:10

F6Q162              	100.00%		H3C5I8              	100.00%
F6WXY4              	16.22%		H3CM82              	18.73%
                    	       		H3D0U5              	11.73%
                    	       		H3C4D6              	7.32%
Bootstrap support for F6Q162 as seed ortholog is 89%.
Bootstrap support for H3C5I8 as seed ortholog is 57%.
Alternative seed ortholog is Q4RV82 (10 bits away from this cluster)

Group of orthologs #3865. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

F7BMP3              	100.00%		H3CGR8              	100.00%
                    	       		H3CEC7              	25.07%
Bootstrap support for F7BMP3 as seed ortholog is 100%.
Bootstrap support for H3CGR8 as seed ortholog is 100%.

Group of orthologs #3866. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

Q4H2N1              	100.00%		H3CAB5              	100.00%
                    	       		Q4RYR3              	11.69%
Bootstrap support for Q4H2N1 as seed ortholog is 100%.
Bootstrap support for H3CAB5 as seed ortholog is 100%.

Group of orthologs #3867. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

F6QEH8              	100.00%		H3CQG0              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for H3CQG0 as seed ortholog is 100%.

Group of orthologs #3868. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

F6XGW2              	100.00%		H3CJF9              	100.00%
Bootstrap support for F6XGW2 as seed ortholog is 100%.
Bootstrap support for H3CJF9 as seed ortholog is 100%.

Group of orthologs #3869. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:97

F6T5I8              	100.00%		H3CZW1              	100.00%
Bootstrap support for F6T5I8 as seed ortholog is 99%.
Bootstrap support for H3CZW1 as seed ortholog is 99%.

Group of orthologs #3870. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:143

F6YI57              	100.00%		H3CHN4              	100.00%
Bootstrap support for F6YI57 as seed ortholog is 99%.
Bootstrap support for H3CHN4 as seed ortholog is 100%.

Group of orthologs #3871. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:113

F7ATM0              	100.00%		H3C8K2              	100.00%
Bootstrap support for F7ATM0 as seed ortholog is 100%.
Bootstrap support for H3C8K2 as seed ortholog is 99%.

Group of orthologs #3872. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

F7B7U2              	100.00%		H3CBC0              	100.00%
Bootstrap support for F7B7U2 as seed ortholog is 100%.
Bootstrap support for H3CBC0 as seed ortholog is 100%.

Group of orthologs #3873. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

F7AFW8              	100.00%		H3DGR1              	100.00%
Bootstrap support for F7AFW8 as seed ortholog is 100%.
Bootstrap support for H3DGR1 as seed ortholog is 100%.

Group of orthologs #3874. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

H2XUK0              	100.00%		H3D2A2              	100.00%
Bootstrap support for H2XUK0 as seed ortholog is 100%.
Bootstrap support for H3D2A2 as seed ortholog is 100%.

Group of orthologs #3875. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 T.nigroviridis:185

F7A5U1              	100.00%		H3DN53              	100.00%
Bootstrap support for F7A5U1 as seed ortholog is 100%.
Bootstrap support for H3DN53 as seed ortholog is 100%.

Group of orthologs #3876. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:184

F6YX22              	100.00%		H3C8Y0              	100.00%
                    	       		H3D3M3              	32.95%
                    	       		H3DMA2              	32.39%
Bootstrap support for F6YX22 as seed ortholog is 100%.
Bootstrap support for H3C8Y0 as seed ortholog is 100%.

Group of orthologs #3877. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:184

F6SHF2              	100.00%		H3C0Y7              	100.00%
                    	       		H3CC14              	6.86%
Bootstrap support for F6SHF2 as seed ortholog is 100%.
Bootstrap support for H3C0Y7 as seed ortholog is 100%.

Group of orthologs #3878. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:184

F6Y6Z0              	100.00%		H3DBZ9              	100.00%
                    	       		H3CU79              	34.41%
Bootstrap support for F6Y6Z0 as seed ortholog is 100%.
Bootstrap support for H3DBZ9 as seed ortholog is 100%.

Group of orthologs #3879. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:108

F6TVM0              	100.00%		H3D1A5              	100.00%
Bootstrap support for F6TVM0 as seed ortholog is 100%.
Bootstrap support for H3D1A5 as seed ortholog is 100%.

Group of orthologs #3880. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:184

H2Y3R7              	100.00%		H3CFZ5              	100.00%
Bootstrap support for H2Y3R7 as seed ortholog is 100%.
Bootstrap support for H3CFZ5 as seed ortholog is 100%.

Group of orthologs #3881. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 T.nigroviridis:184

F6WMZ2              	100.00%		Q4TJA1              	100.00%
Bootstrap support for F6WMZ2 as seed ortholog is 100%.
Bootstrap support for Q4TJA1 as seed ortholog is 100%.

Group of orthologs #3882. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:79

F6XVV4              	100.00%		H3D0X6              	100.00%
                    	       		H3DBY1              	35.42%
                    	       		H3CZL3              	27.27%
                    	       		H3DHF8              	25.08%
Bootstrap support for F6XVV4 as seed ortholog is 100%.
Bootstrap support for H3D0X6 as seed ortholog is 99%.

Group of orthologs #3883. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:183

F6V6C3              	100.00%		H3CZ01              	100.00%
                    	       		H3CXS4              	11.57%
Bootstrap support for F6V6C3 as seed ortholog is 55%.
Alternative seed ortholog is F6TJR3 (3 bits away from this cluster)
Bootstrap support for H3CZ01 as seed ortholog is 100%.

Group of orthologs #3884. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F6ZD22              	100.00%		H3DKA1              	100.00%
                    	       		H3D0Y9              	21.15%
Bootstrap support for F6ZD22 as seed ortholog is 100%.
Bootstrap support for H3DKA1 as seed ortholog is 100%.

Group of orthologs #3885. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F6ZMJ7              	100.00%		Q4SS97              	100.00%
                    	       		H3D4N1              	46.34%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for Q4SS97 as seed ortholog is 100%.

Group of orthologs #3886. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F6QU80              	100.00%		H3CGY5              	100.00%
Bootstrap support for F6QU80 as seed ortholog is 100%.
Bootstrap support for H3CGY5 as seed ortholog is 100%.

Group of orthologs #3887. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F6RZE8              	100.00%		H3CP11              	100.00%
Bootstrap support for F6RZE8 as seed ortholog is 100%.
Bootstrap support for H3CP11 as seed ortholog is 100%.

Group of orthologs #3888. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F7AHS5              	100.00%		H3CQT8              	100.00%
Bootstrap support for F7AHS5 as seed ortholog is 100%.
Bootstrap support for H3CQT8 as seed ortholog is 100%.

Group of orthologs #3889. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F7AIB9              	100.00%		H3CT03              	100.00%
Bootstrap support for F7AIB9 as seed ortholog is 100%.
Bootstrap support for H3CT03 as seed ortholog is 100%.

Group of orthologs #3890. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F6TFV0              	100.00%		H3DIU9              	100.00%
Bootstrap support for F6TFV0 as seed ortholog is 100%.
Bootstrap support for H3DIU9 as seed ortholog is 100%.

Group of orthologs #3891. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

H2XMW2              	100.00%		H3CM76              	100.00%
Bootstrap support for H2XMW2 as seed ortholog is 100%.
Bootstrap support for H3CM76 as seed ortholog is 100%.

Group of orthologs #3892. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

H2XW59              	100.00%		H3CKR0              	100.00%
Bootstrap support for H2XW59 as seed ortholog is 100%.
Bootstrap support for H3CKR0 as seed ortholog is 100%.

Group of orthologs #3893. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:36

F6ZFZ3              	100.00%		H3DIW2              	100.00%
Bootstrap support for F6ZFZ3 as seed ortholog is 100%.
Bootstrap support for H3DIW2 as seed ortholog is 99%.

Group of orthologs #3894. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 T.nigroviridis:183

F7B8L3              	100.00%		H3DF64              	100.00%
Bootstrap support for F7B8L3 as seed ortholog is 100%.
Bootstrap support for H3DF64 as seed ortholog is 100%.

Group of orthologs #3895. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:103

H2XZX4              	100.00%		H3CVQ1              	100.00%
Bootstrap support for H2XZX4 as seed ortholog is 100%.
Bootstrap support for H3CVQ1 as seed ortholog is 99%.

Group of orthologs #3896. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:27

Q2PEE2              	100.00%		Q4S6Y1              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 100%.
Bootstrap support for Q4S6Y1 as seed ortholog is 98%.

Group of orthologs #3897. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:136

F6Z3A0              	100.00%		H3C9S9              	100.00%
                    	       		H3CFN2              	100.00%
Bootstrap support for F6Z3A0 as seed ortholog is 99%.
Bootstrap support for H3C9S9 as seed ortholog is 100%.
Bootstrap support for H3CFN2 as seed ortholog is 100%.

Group of orthologs #3898. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:182

F6WFD1              	100.00%		H3DLG9              	100.00%
                    	       		H3CQ12              	9.28%
Bootstrap support for F6WFD1 as seed ortholog is 100%.
Bootstrap support for H3DLG9 as seed ortholog is 100%.

Group of orthologs #3899. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:182

F6R725              	100.00%		H3CC76              	100.00%
Bootstrap support for F6R725 as seed ortholog is 100%.
Bootstrap support for H3CC76 as seed ortholog is 100%.

Group of orthologs #3900. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:39

H2XTW7              	100.00%		H3CHD9              	100.00%
Bootstrap support for H2XTW7 as seed ortholog is 100%.
Bootstrap support for H3CHD9 as seed ortholog is 89%.

Group of orthologs #3901. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:182

F6Z277              	100.00%		Q4RR88              	100.00%
Bootstrap support for F6Z277 as seed ortholog is 100%.
Bootstrap support for Q4RR88 as seed ortholog is 100%.

Group of orthologs #3902. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:182

H2XRZ5              	100.00%		H3DK99              	100.00%
Bootstrap support for H2XRZ5 as seed ortholog is 100%.
Bootstrap support for H3DK99 as seed ortholog is 100%.

Group of orthologs #3903. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:10

Q2PEE1              	100.00%		H3DFM3              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for H3DFM3 as seed ortholog is 86%.

Group of orthologs #3904. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 T.nigroviridis:182

Q4H329              	100.00%		Q4SZN8              	100.00%
Bootstrap support for Q4H329 as seed ortholog is 100%.
Bootstrap support for Q4SZN8 as seed ortholog is 100%.

Group of orthologs #3905. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:181

F6VQ85              	100.00%		H3DHU9              	100.00%
                    	       		H3CA94              	38.43%
Bootstrap support for F6VQ85 as seed ortholog is 100%.
Bootstrap support for H3DHU9 as seed ortholog is 100%.

Group of orthologs #3906. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:102

F6RG85              	100.00%		H3D696              	100.00%
Bootstrap support for F6RG85 as seed ortholog is 100%.
Bootstrap support for H3D696 as seed ortholog is 99%.

Group of orthologs #3907. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:181

F6SNK4              	100.00%		H3DAL8              	100.00%
Bootstrap support for F6SNK4 as seed ortholog is 100%.
Bootstrap support for H3DAL8 as seed ortholog is 100%.

Group of orthologs #3908. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:97

F6XTM9              	100.00%		H3CYF7              	100.00%
Bootstrap support for F6XTM9 as seed ortholog is 100%.
Bootstrap support for H3CYF7 as seed ortholog is 99%.

Group of orthologs #3909. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:56

F6QCP0              	100.00%		Q4RX90              	100.00%
Bootstrap support for F6QCP0 as seed ortholog is 89%.
Bootstrap support for Q4RX90 as seed ortholog is 98%.

Group of orthologs #3910. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:181

I6L2C8              	100.00%		H3BZD3              	100.00%
Bootstrap support for I6L2C8 as seed ortholog is 100%.
Bootstrap support for H3BZD3 as seed ortholog is 100%.

Group of orthologs #3911. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:181

F7BPR4              	100.00%		H3CW94              	100.00%
Bootstrap support for F7BPR4 as seed ortholog is 100%.
Bootstrap support for H3CW94 as seed ortholog is 100%.

Group of orthologs #3912. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:181

F6XS97              	100.00%		H3DL73              	100.00%
Bootstrap support for F6XS97 as seed ortholog is 99%.
Bootstrap support for H3DL73 as seed ortholog is 100%.

Group of orthologs #3913. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:69

F7B6U2              	100.00%		H3DJT4              	100.00%
Bootstrap support for F7B6U2 as seed ortholog is 99%.
Bootstrap support for H3DJT4 as seed ortholog is 99%.

Group of orthologs #3914. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 T.nigroviridis:181

H2XQD7              	100.00%		Q4SEE6              	100.00%
Bootstrap support for H2XQD7 as seed ortholog is 100%.
Bootstrap support for Q4SEE6 as seed ortholog is 100%.

Group of orthologs #3915. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:67

Q4H303              	100.00%		H3CWU5              	100.00%
                    	       		H3DJ24              	35.07%
                    	       		H3D078              	31.94%
                    	       		H3DA08              	29.44%
                    	       		Q4S9F9              	29.23%
Bootstrap support for Q4H303 as seed ortholog is 100%.
Bootstrap support for H3CWU5 as seed ortholog is 99%.

Group of orthologs #3916. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 T.nigroviridis:42

F6XY36              	100.00%		H3BWS3              	100.00%
                    	       		H3DRE6              	45.27%
                    	       		H3DGV9              	20.27%
Bootstrap support for F6XY36 as seed ortholog is 57%.
Alternative seed ortholog is F6R1K9 (9 bits away from this cluster)
Bootstrap support for H3BWS3 as seed ortholog is 82%.

Group of orthologs #3917. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 T.nigroviridis:180

F6SLU0              	100.00%		H3CT29              	100.00%
                    	       		H3D8U4              	6.22%
Bootstrap support for F6SLU0 as seed ortholog is 64%.
Alternative seed ortholog is H2XRV4 (20 bits away from this cluster)
Bootstrap support for H3CT29 as seed ortholog is 100%.

Group of orthologs #3918. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

H2XUJ8              	100.00%		H3CNF3              	100.00%
H2XQM6              	15.36%		
Bootstrap support for H2XUJ8 as seed ortholog is 100%.
Bootstrap support for H3CNF3 as seed ortholog is 100%.

Group of orthologs #3919. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

F6PII0              	100.00%		H3CLG9              	100.00%
Bootstrap support for F6PII0 as seed ortholog is 100%.
Bootstrap support for H3CLG9 as seed ortholog is 100%.

Group of orthologs #3920. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

F6R255              	100.00%		H3CH66              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for H3CH66 as seed ortholog is 100%.

Group of orthologs #3921. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:32

F6TKE5              	100.00%		H3CAP9              	100.00%
Bootstrap support for F6TKE5 as seed ortholog is 99%.
Bootstrap support for H3CAP9 as seed ortholog is 90%.

Group of orthologs #3922. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

F6QES8              	100.00%		H3CQZ8              	100.00%
Bootstrap support for F6QES8 as seed ortholog is 100%.
Bootstrap support for H3CQZ8 as seed ortholog is 100%.

Group of orthologs #3923. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:126

F6PWH2              	100.00%		H3DBD7              	100.00%
Bootstrap support for F6PWH2 as seed ortholog is 100%.
Bootstrap support for H3DBD7 as seed ortholog is 100%.

Group of orthologs #3924. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:180

F6S714              	100.00%		H3D859              	100.00%
Bootstrap support for F6S714 as seed ortholog is 95%.
Bootstrap support for H3D859 as seed ortholog is 100%.

Group of orthologs #3925. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

F7BEK1              	100.00%		H3CLB0              	100.00%
Bootstrap support for F7BEK1 as seed ortholog is 100%.
Bootstrap support for H3CLB0 as seed ortholog is 100%.

Group of orthologs #3926. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

F6W7Q3              	100.00%		H3DAK4              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for H3DAK4 as seed ortholog is 100%.

Group of orthologs #3927. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

H2Y2S5              	100.00%		H3C9R8              	100.00%
Bootstrap support for H2Y2S5 as seed ortholog is 100%.
Bootstrap support for H3C9R8 as seed ortholog is 100%.

Group of orthologs #3928. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

F7BC02              	100.00%		H3DDS2              	100.00%
Bootstrap support for F7BC02 as seed ortholog is 100%.
Bootstrap support for H3DDS2 as seed ortholog is 100%.

Group of orthologs #3929. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:73

H2XR40              	100.00%		H3DCV6              	100.00%
Bootstrap support for H2XR40 as seed ortholog is 100%.
Bootstrap support for H3DCV6 as seed ortholog is 98%.

Group of orthologs #3930. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 T.nigroviridis:180

H2XUX6              	100.00%		H3DGB8              	100.00%
Bootstrap support for H2XUX6 as seed ortholog is 100%.
Bootstrap support for H3DGB8 as seed ortholog is 100%.

Group of orthologs #3931. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:17

H2Y0T8              	100.00%		H3DG27              	100.00%
F7BD99              	38.91%		
H2XLH1              	8.19%		
F6TN85              	7.17%		
Bootstrap support for H2Y0T8 as seed ortholog is 95%.
Bootstrap support for H3DG27 as seed ortholog is 73%.
Alternative seed ortholog is H3CJJ8 (17 bits away from this cluster)

Group of orthologs #3932. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:179

F6R4L0              	100.00%		H3C128              	100.00%
Bootstrap support for F6R4L0 as seed ortholog is 100%.
Bootstrap support for H3C128 as seed ortholog is 100%.

Group of orthologs #3933. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:179

F6XMX2              	100.00%		H3BWC7              	100.00%
Bootstrap support for F6XMX2 as seed ortholog is 100%.
Bootstrap support for H3BWC7 as seed ortholog is 100%.

Group of orthologs #3934. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:179

F6WQ64              	100.00%		H3DG49              	100.00%
Bootstrap support for F6WQ64 as seed ortholog is 100%.
Bootstrap support for H3DG49 as seed ortholog is 100%.

Group of orthologs #3935. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:179

F7BK02              	100.00%		H3D7H5              	100.00%
Bootstrap support for F7BK02 as seed ortholog is 100%.
Bootstrap support for H3D7H5 as seed ortholog is 100%.

Group of orthologs #3936. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:179

H2XLA2              	100.00%		H3DEG0              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for H3DEG0 as seed ortholog is 100%.

Group of orthologs #3937. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 T.nigroviridis:52

H2XKX7              	100.00%		H3DJJ5              	100.00%
Bootstrap support for H2XKX7 as seed ortholog is 100%.
Bootstrap support for H3DJJ5 as seed ortholog is 95%.

Group of orthologs #3938. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:83

Q4H2J7              	100.00%		H3DHS5              	100.00%
                    	       		H3DM64              	47.66%
                    	       		H3CNN3              	25.07%
                    	       		H3CB49              	19.70%
                    	       		H3D9G1              	6.20%
                    	       		H3CB50              	6.06%
Bootstrap support for Q4H2J7 as seed ortholog is 100%.
Bootstrap support for H3DHS5 as seed ortholog is 94%.

Group of orthologs #3939. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:178

F6SQ23              	100.00%		H3CH39              	100.00%
F6VKX9              	35.23%		Q4SFN9              	21.37%
Bootstrap support for F6SQ23 as seed ortholog is 90%.
Bootstrap support for H3CH39 as seed ortholog is 100%.

Group of orthologs #3940. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F6URF6              	100.00%		H3D128              	100.00%
                    	       		H3D5Y0              	19.53%
                    	       		H3CFK8              	17.91%
Bootstrap support for F6URF6 as seed ortholog is 100%.
Bootstrap support for H3D128 as seed ortholog is 100%.

Group of orthologs #3941. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:57

F6T788              	100.00%		Q4RSA3              	100.00%
F6TTN6              	21.80%		
F6XBI2              	18.05%		
Bootstrap support for F6T788 as seed ortholog is 53%.
Alternative seed ortholog is H2XJX9 (3 bits away from this cluster)
Bootstrap support for Q4RSA3 as seed ortholog is 92%.

Group of orthologs #3942. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

Q4H3N7              	100.00%		H3CVA9              	100.00%
                    	       		H3CYA0              	23.13%
                    	       		H3DCZ2              	17.61%
Bootstrap support for Q4H3N7 as seed ortholog is 100%.
Bootstrap support for H3CVA9 as seed ortholog is 100%.

Group of orthologs #3943. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F6UXU4              	100.00%		H3CCC7              	100.00%
Bootstrap support for F6UXU4 as seed ortholog is 100%.
Bootstrap support for H3CCC7 as seed ortholog is 100%.

Group of orthologs #3944. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F6WCM2              	100.00%		H3CC11              	100.00%
Bootstrap support for F6WCM2 as seed ortholog is 100%.
Bootstrap support for H3CC11 as seed ortholog is 100%.

Group of orthologs #3945. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:69

F6V8N0              	100.00%		H3CW32              	100.00%
Bootstrap support for F6V8N0 as seed ortholog is 99%.
Bootstrap support for H3CW32 as seed ortholog is 96%.

Group of orthologs #3946. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F6ZV18              	100.00%		H3CSY7              	100.00%
Bootstrap support for F6ZV18 as seed ortholog is 100%.
Bootstrap support for H3CSY7 as seed ortholog is 100%.

Group of orthologs #3947. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F6QSH0              	100.00%		H3DNF7              	100.00%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for H3DNF7 as seed ortholog is 100%.

Group of orthologs #3948. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F6PMB4              	100.00%		Q4ST53              	100.00%
Bootstrap support for F6PMB4 as seed ortholog is 100%.
Bootstrap support for Q4ST53 as seed ortholog is 100%.

Group of orthologs #3949. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

F7AX27              	100.00%		H3DDR0              	100.00%
Bootstrap support for F7AX27 as seed ortholog is 100%.
Bootstrap support for H3DDR0 as seed ortholog is 100%.

Group of orthologs #3950. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

H2XPL7              	100.00%		H3DDU9              	100.00%
Bootstrap support for H2XPL7 as seed ortholog is 100%.
Bootstrap support for H3DDU9 as seed ortholog is 100%.

Group of orthologs #3951. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:57

H2XQ72              	100.00%		H3DEH0              	100.00%
Bootstrap support for H2XQ72 as seed ortholog is 100%.
Bootstrap support for H3DEH0 as seed ortholog is 93%.

Group of orthologs #3952. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 T.nigroviridis:178

H2XSM3              	100.00%		H3DMP2              	100.00%
Bootstrap support for H2XSM3 as seed ortholog is 100%.
Bootstrap support for H3DMP2 as seed ortholog is 100%.

Group of orthologs #3953. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:117

F6T4U7              	100.00%		Q4RKW4              	100.00%
F6ZUV3              	17.94%		
Bootstrap support for F6T4U7 as seed ortholog is 100%.
Bootstrap support for Q4RKW4 as seed ortholog is 99%.

Group of orthologs #3954. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:177

Q4H3A1              	100.00%		H3CXV6              	100.00%
                    	       		Q4S7T2              	16.95%
Bootstrap support for Q4H3A1 as seed ortholog is 100%.
Bootstrap support for H3CXV6 as seed ortholog is 100%.

Group of orthologs #3955. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:177

F6U7R3              	100.00%		H3CBE2              	100.00%
Bootstrap support for F6U7R3 as seed ortholog is 100%.
Bootstrap support for H3CBE2 as seed ortholog is 100%.

Group of orthologs #3956. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:177

F6RBI7              	100.00%		H3D3X7              	100.00%
Bootstrap support for F6RBI7 as seed ortholog is 84%.
Bootstrap support for H3D3X7 as seed ortholog is 100%.

Group of orthologs #3957. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:177

F6PV21              	100.00%		H3DBN1              	100.00%
Bootstrap support for F6PV21 as seed ortholog is 100%.
Bootstrap support for H3DBN1 as seed ortholog is 100%.

Group of orthologs #3958. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:111

F7A552              	100.00%		H3CHM4              	100.00%
Bootstrap support for F7A552 as seed ortholog is 99%.
Bootstrap support for H3CHM4 as seed ortholog is 99%.

Group of orthologs #3959. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:134

H2XV14              	100.00%		H3C9C6              	100.00%
Bootstrap support for H2XV14 as seed ortholog is 99%.
Bootstrap support for H3C9C6 as seed ortholog is 99%.

Group of orthologs #3960. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 T.nigroviridis:177

F7APG8              	100.00%		H3D425              	100.00%
Bootstrap support for F7APG8 as seed ortholog is 100%.
Bootstrap support for H3D425 as seed ortholog is 100%.

Group of orthologs #3961. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 T.nigroviridis:56

F7AZY1              	100.00%		H3D811              	100.00%
                    	       		H3CKK1              	50.41%
                    	       		H3CVL0              	33.88%
                    	       		H3CA26              	8.54%
Bootstrap support for F7AZY1 as seed ortholog is 83%.
Bootstrap support for H3D811 as seed ortholog is 92%.

Group of orthologs #3962. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F6TPM4              	100.00%		H3D146              	100.00%
                    	       		H3CRR6              	87.50%
Bootstrap support for F6TPM4 as seed ortholog is 100%.
Bootstrap support for H3D146 as seed ortholog is 100%.

Group of orthologs #3963. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F6VGI1              	100.00%		Q4REF8              	100.00%
                    	       		H3D765              	15.05%
Bootstrap support for F6VGI1 as seed ortholog is 100%.
Bootstrap support for Q4REF8 as seed ortholog is 100%.

Group of orthologs #3964. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

Q4H2N7              	100.00%		H3DHL7              	100.00%
                    	       		H3CZE6              	23.09%
Bootstrap support for Q4H2N7 as seed ortholog is 99%.
Bootstrap support for H3DHL7 as seed ortholog is 99%.

Group of orthologs #3965. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F6VXS0              	100.00%		H3CCG2              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for H3CCG2 as seed ortholog is 100%.

Group of orthologs #3966. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F6V7V1              	100.00%		H3CHQ7              	100.00%
Bootstrap support for F6V7V1 as seed ortholog is 100%.
Bootstrap support for H3CHQ7 as seed ortholog is 100%.

Group of orthologs #3967. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

H2XML4              	100.00%		H3C1L3              	100.00%
Bootstrap support for H2XML4 as seed ortholog is 100%.
Bootstrap support for H3C1L3 as seed ortholog is 100%.

Group of orthologs #3968. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F6TIT1              	100.00%		Q4RAG7              	100.00%
Bootstrap support for F6TIT1 as seed ortholog is 100%.
Bootstrap support for Q4RAG7 as seed ortholog is 100%.

Group of orthologs #3969. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F6YB21              	100.00%		H3DE84              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for H3DE84 as seed ortholog is 100%.

Group of orthologs #3970. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:176

H2XU85              	100.00%		H3CPV4              	100.00%
Bootstrap support for H2XU85 as seed ortholog is 84%.
Bootstrap support for H3CPV4 as seed ortholog is 100%.

Group of orthologs #3971. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:176

F7BMN7              	100.00%		H3DBW7              	100.00%
Bootstrap support for F7BMN7 as seed ortholog is 100%.
Bootstrap support for H3DBW7 as seed ortholog is 100%.

Group of orthologs #3972. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 T.nigroviridis:89

H2Y0A0              	100.00%		H3CX53              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 100%.
Bootstrap support for H3CX53 as seed ortholog is 99%.

Group of orthologs #3973. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:25

H2XM24              	100.00%		H3C551              	100.00%
H2XZP0              	68.12%		H3C9V6              	9.97%
F6UAK1              	14.37%		
F6UJX7              	13.44%		
F6WBD4              	12.81%		
F6T4X9              	12.19%		
Bootstrap support for H2XM24 as seed ortholog is 91%.
Bootstrap support for H3C551 as seed ortholog is 74%.
Alternative seed ortholog is H3DQK7 (25 bits away from this cluster)

Group of orthologs #3974. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6Z0L2              	100.00%		H3CUB4              	100.00%
                    	       		H3DL38              	33.60%
Bootstrap support for F6Z0L2 as seed ortholog is 100%.
Bootstrap support for H3CUB4 as seed ortholog is 100%.

Group of orthologs #3975. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6QPH0              	100.00%		H3CZE8              	100.00%
Bootstrap support for F6QPH0 as seed ortholog is 100%.
Bootstrap support for H3CZE8 as seed ortholog is 100%.

Group of orthologs #3976. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:100

F6ZTN4              	100.00%		H3C3D3              	100.00%
Bootstrap support for F6ZTN4 as seed ortholog is 100%.
Bootstrap support for H3C3D3 as seed ortholog is 99%.

Group of orthologs #3977. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6WVE1              	100.00%		H3CGZ4              	100.00%
Bootstrap support for F6WVE1 as seed ortholog is 100%.
Bootstrap support for H3CGZ4 as seed ortholog is 100%.

Group of orthologs #3978. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6VN25              	100.00%		H3CLG1              	100.00%
Bootstrap support for F6VN25 as seed ortholog is 100%.
Bootstrap support for H3CLG1 as seed ortholog is 100%.

Group of orthologs #3979. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6SEF1              	100.00%		H3CY60              	100.00%
Bootstrap support for F6SEF1 as seed ortholog is 100%.
Bootstrap support for H3CY60 as seed ortholog is 100%.

Group of orthologs #3980. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:68

F6ZTS6              	100.00%		H3C9R0              	100.00%
Bootstrap support for F6ZTS6 as seed ortholog is 100%.
Bootstrap support for H3C9R0 as seed ortholog is 95%.

Group of orthologs #3981. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F7B2D4              	100.00%		H3CJ07              	100.00%
Bootstrap support for F7B2D4 as seed ortholog is 100%.
Bootstrap support for H3CJ07 as seed ortholog is 100%.

Group of orthologs #3982. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6WBQ8              	100.00%		H3DBK3              	100.00%
Bootstrap support for F6WBQ8 as seed ortholog is 100%.
Bootstrap support for H3DBK3 as seed ortholog is 100%.

Group of orthologs #3983. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

F6TN99              	100.00%		H3DN79              	100.00%
Bootstrap support for F6TN99 as seed ortholog is 100%.
Bootstrap support for H3DN79 as seed ortholog is 100%.

Group of orthologs #3984. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 T.nigroviridis:175

H2Y0Y0              	100.00%		H3CIL0              	100.00%
Bootstrap support for H2Y0Y0 as seed ortholog is 100%.
Bootstrap support for H3CIL0 as seed ortholog is 100%.

Group of orthologs #3985. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:175

F7B8Y3              	100.00%		H3DBB1              	100.00%
Bootstrap support for F7B8Y3 as seed ortholog is 99%.
Bootstrap support for H3DBB1 as seed ortholog is 100%.

Group of orthologs #3986. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:82

H2XW11              	100.00%		H3CYN1              	100.00%
Bootstrap support for H2XW11 as seed ortholog is 98%.
Bootstrap support for H3CYN1 as seed ortholog is 99%.

Group of orthologs #3987. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:12

F6U0A7              	100.00%		H3CU02              	100.00%
F7AKQ9              	10.51%		
Bootstrap support for F6U0A7 as seed ortholog is 91%.
Bootstrap support for H3CU02 as seed ortholog is 62%.
Alternative seed ortholog is H3DNG3 (12 bits away from this cluster)

Group of orthologs #3988. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:174

F6XS77              	100.00%		H3DBX9              	100.00%
                    	       		H3DE96              	22.52%
Bootstrap support for F6XS77 as seed ortholog is 100%.
Bootstrap support for H3DBX9 as seed ortholog is 100%.

Group of orthologs #3989. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:174

H2Y1H2              	100.00%		H3CSF5              	100.00%
                    	       		H3CTA8              	19.41%
Bootstrap support for H2Y1H2 as seed ortholog is 78%.
Bootstrap support for H3CSF5 as seed ortholog is 100%.

Group of orthologs #3990. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:174

F6PXS4              	100.00%		H3CGD8              	100.00%
Bootstrap support for F6PXS4 as seed ortholog is 100%.
Bootstrap support for H3CGD8 as seed ortholog is 100%.

Group of orthologs #3991. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:174

F6QN05              	100.00%		H3CHV0              	100.00%
Bootstrap support for F6QN05 as seed ortholog is 100%.
Bootstrap support for H3CHV0 as seed ortholog is 100%.

Group of orthologs #3992. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:174

F6W3V6              	100.00%		H3CWK6              	100.00%
Bootstrap support for F6W3V6 as seed ortholog is 100%.
Bootstrap support for H3CWK6 as seed ortholog is 100%.

Group of orthologs #3993. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:174

F6TLT5              	100.00%		H3DG50              	100.00%
Bootstrap support for F6TLT5 as seed ortholog is 100%.
Bootstrap support for H3DG50 as seed ortholog is 100%.

Group of orthologs #3994. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:174

F6XRM1              	100.00%		H3DCR6              	100.00%
Bootstrap support for F6XRM1 as seed ortholog is 100%.
Bootstrap support for H3DCR6 as seed ortholog is 100%.

Group of orthologs #3995. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 T.nigroviridis:174

H2XSM6              	100.00%		H3D4A1              	100.00%
Bootstrap support for H2XSM6 as seed ortholog is 100%.
Bootstrap support for H3D4A1 as seed ortholog is 100%.

Group of orthologs #3996. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:174

F6ZVS4              	100.00%		Q4RP99              	100.00%
Bootstrap support for F6ZVS4 as seed ortholog is 100%.
Bootstrap support for Q4RP99 as seed ortholog is 100%.

Group of orthologs #3997. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:131

F6QDM9              	100.00%		H3DGL3              	100.00%
F6Y3D6              	47.65%		
F6QDM2              	32.13%		
L7N0U1              	23.83%		
Bootstrap support for F6QDM9 as seed ortholog is 99%.
Bootstrap support for H3DGL3 as seed ortholog is 100%.

Group of orthologs #3998. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F6QFQ6              	100.00%		H3BZE1              	100.00%
F6Z0B9              	47.60%		
Bootstrap support for F6QFQ6 as seed ortholog is 100%.
Bootstrap support for H3BZE1 as seed ortholog is 100%.

Group of orthologs #3999. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F6WAB5              	100.00%		Q4S0I8              	100.00%
                    	       		H3BWC8              	26.73%
Bootstrap support for F6WAB5 as seed ortholog is 100%.
Bootstrap support for Q4S0I8 as seed ortholog is 100%.

Group of orthologs #4000. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F7BLX1              	100.00%		H3DNG4              	100.00%
                    	       		H3D0H0              	47.11%
Bootstrap support for F7BLX1 as seed ortholog is 100%.
Bootstrap support for H3DNG4 as seed ortholog is 100%.

Group of orthologs #4001. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 T.nigroviridis:173

F6VBS7              	100.00%		H3C566              	100.00%
Bootstrap support for F6VBS7 as seed ortholog is 97%.
Bootstrap support for H3C566 as seed ortholog is 100%.

Group of orthologs #4002. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:99

F6SAA4              	100.00%		H3CKE3              	100.00%
Bootstrap support for F6SAA4 as seed ortholog is 100%.
Bootstrap support for H3CKE3 as seed ortholog is 99%.

Group of orthologs #4003. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F6U3A5              	100.00%		H3CNX1              	100.00%
Bootstrap support for F6U3A5 as seed ortholog is 100%.
Bootstrap support for H3CNX1 as seed ortholog is 100%.

Group of orthologs #4004. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F6ZPT5              	100.00%		H3CCF9              	100.00%
Bootstrap support for F6ZPT5 as seed ortholog is 100%.
Bootstrap support for H3CCF9 as seed ortholog is 100%.

Group of orthologs #4005. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:112

F6ZGG6              	100.00%		H3CEH9              	100.00%
Bootstrap support for F6ZGG6 as seed ortholog is 100%.
Bootstrap support for H3CEH9 as seed ortholog is 91%.

Group of orthologs #4006. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F6V1U5              	100.00%		H3D2L7              	100.00%
Bootstrap support for F6V1U5 as seed ortholog is 100%.
Bootstrap support for H3D2L7 as seed ortholog is 100%.

Group of orthologs #4007. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F6RXS5              	100.00%		H3DFB4              	100.00%
Bootstrap support for F6RXS5 as seed ortholog is 100%.
Bootstrap support for H3DFB4 as seed ortholog is 100%.

Group of orthologs #4008. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

H2XU81              	100.00%		H3CM36              	100.00%
Bootstrap support for H2XU81 as seed ortholog is 100%.
Bootstrap support for H3CM36 as seed ortholog is 100%.

Group of orthologs #4009. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

F7AW28              	100.00%		H3D508              	100.00%
Bootstrap support for F7AW28 as seed ortholog is 100%.
Bootstrap support for H3D508 as seed ortholog is 100%.

Group of orthologs #4010. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:126

F6X555              	100.00%		H3DQ05              	100.00%
Bootstrap support for F6X555 as seed ortholog is 100%.
Bootstrap support for H3DQ05 as seed ortholog is 99%.

Group of orthologs #4011. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 T.nigroviridis:39

F6YCN8              	100.00%		H3DQX5              	100.00%
Bootstrap support for F6YCN8 as seed ortholog is 67%.
Alternative seed ortholog is F6T2A6 (9 bits away from this cluster)
Bootstrap support for H3DQX5 as seed ortholog is 96%.

Group of orthologs #4012. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 T.nigroviridis:173

H2XM98              	100.00%		H3DKA5              	100.00%
Bootstrap support for H2XM98 as seed ortholog is 100%.
Bootstrap support for H3DKA5 as seed ortholog is 100%.

Group of orthologs #4013. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6WGT4              	100.00%		H3D6N4              	100.00%
F6ZFJ3              	11.00%		H3DCX4              	35.45%
                    	       		H3CVT3              	12.85%
Bootstrap support for F6WGT4 as seed ortholog is 100%.
Bootstrap support for H3D6N4 as seed ortholog is 100%.

Group of orthologs #4014. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6R8K6              	100.00%		H3CJH9              	100.00%
                    	       		H3DJG1              	45.73%
                    	       		H3CXX3              	5.22%
Bootstrap support for F6R8K6 as seed ortholog is 100%.
Bootstrap support for H3CJH9 as seed ortholog is 100%.

Group of orthologs #4015. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:32

H2XVW7              	100.00%		H3D9E1              	100.00%
F6VZ53              	5.56%		
Bootstrap support for H2XVW7 as seed ortholog is 97%.
Bootstrap support for H3D9E1 as seed ortholog is 90%.

Group of orthologs #4016. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6VGF9              	100.00%		H3CLB3              	100.00%
Bootstrap support for F6VGF9 as seed ortholog is 100%.
Bootstrap support for H3CLB3 as seed ortholog is 100%.

Group of orthologs #4017. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6XWF2              	100.00%		H3CHB4              	100.00%
Bootstrap support for F6XWF2 as seed ortholog is 100%.
Bootstrap support for H3CHB4 as seed ortholog is 100%.

Group of orthologs #4018. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6SYB9              	100.00%		H3D1R4              	100.00%
Bootstrap support for F6SYB9 as seed ortholog is 100%.
Bootstrap support for H3D1R4 as seed ortholog is 100%.

Group of orthologs #4019. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F7AMY5              	100.00%		H3CLC4              	100.00%
Bootstrap support for F7AMY5 as seed ortholog is 100%.
Bootstrap support for H3CLC4 as seed ortholog is 100%.

Group of orthologs #4020. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6ZFV5              	100.00%		H3D3U0              	100.00%
Bootstrap support for F6ZFV5 as seed ortholog is 100%.
Bootstrap support for H3D3U0 as seed ortholog is 100%.

Group of orthologs #4021. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F7AP11              	100.00%		H3DDJ5              	100.00%
Bootstrap support for F7AP11 as seed ortholog is 100%.
Bootstrap support for H3DDJ5 as seed ortholog is 100%.

Group of orthologs #4022. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F7AW07              	100.00%		H3DJC0              	100.00%
Bootstrap support for F7AW07 as seed ortholog is 100%.
Bootstrap support for H3DJC0 as seed ortholog is 100%.

Group of orthologs #4023. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

H2XWV9              	100.00%		H3CZ27              	100.00%
Bootstrap support for H2XWV9 as seed ortholog is 100%.
Bootstrap support for H3CZ27 as seed ortholog is 100%.

Group of orthologs #4024. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 T.nigroviridis:172

F6YVQ1              	100.00%		Q4T5T8              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 100%.
Bootstrap support for Q4T5T8 as seed ortholog is 100%.

Group of orthologs #4025. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:171

F6VRV5              	100.00%		H3BYR2              	100.00%
                    	       		H3D543              	26.27%
                    	       		H3DCK1              	24.82%
                    	       		H3CAU9              	19.76%
                    	       		H3DEZ0              	15.42%
Bootstrap support for F6VRV5 as seed ortholog is 100%.
Bootstrap support for H3BYR2 as seed ortholog is 100%.

Group of orthologs #4026. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:65

F6QP05              	100.00%		H3CPW8              	100.00%
                    	       		H3C9L1              	15.63%
                    	       		H3CNE5              	14.72%
                    	       		H3CKQ1              	13.81%
Bootstrap support for F6QP05 as seed ortholog is 99%.
Bootstrap support for H3CPW8 as seed ortholog is 95%.

Group of orthologs #4027. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:15

H2XQX8              	100.00%		H3DG26              	100.00%
H2XNN0              	6.04%		H3DIN8              	39.89%
                    	       		Q4SCQ5              	21.09%
Bootstrap support for H2XQX8 as seed ortholog is 90%.
Bootstrap support for H3DG26 as seed ortholog is 63%.
Alternative seed ortholog is H3C1R8 (15 bits away from this cluster)

Group of orthologs #4028. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 T.nigroviridis:171

F7AB81              	100.00%		H3DI02              	100.00%
                    	       		H3BWR9              	89.08%
Bootstrap support for F7AB81 as seed ortholog is 91%.
Bootstrap support for H3DI02 as seed ortholog is 100%.

Group of orthologs #4029. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 T.nigroviridis:85

F6R1D9              	100.00%		H3BXQ1              	100.00%
Bootstrap support for F6R1D9 as seed ortholog is 49%.
Alternative seed ortholog is F6V879 (1 bits away from this cluster)
Bootstrap support for H3BXQ1 as seed ortholog is 99%.

Group of orthologs #4030. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:171

F6U0U0              	100.00%		H3BWK1              	100.00%
Bootstrap support for F6U0U0 as seed ortholog is 99%.
Bootstrap support for H3BWK1 as seed ortholog is 100%.

Group of orthologs #4031. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:7

F6QDK5              	100.00%		H3DB33              	100.00%
Bootstrap support for F6QDK5 as seed ortholog is 100%.
Bootstrap support for H3DB33 as seed ortholog is 57%.
Alternative seed ortholog is H3BZA9 (7 bits away from this cluster)

Group of orthologs #4032. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:171

F6PWX0              	100.00%		Q4TBT9              	100.00%
Bootstrap support for F6PWX0 as seed ortholog is 100%.
Bootstrap support for Q4TBT9 as seed ortholog is 100%.

Group of orthologs #4033. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:171

Q8T886              	100.00%		H3C256              	100.00%
Bootstrap support for Q8T886 as seed ortholog is 100%.
Bootstrap support for H3C256 as seed ortholog is 100%.

Group of orthologs #4034. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:171

H2XWA4              	100.00%		H3CSL5              	100.00%
Bootstrap support for H2XWA4 as seed ortholog is 100%.
Bootstrap support for H3CSL5 as seed ortholog is 100%.

Group of orthologs #4035. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 T.nigroviridis:171

H2XNU4              	100.00%		H3DGL0              	100.00%
Bootstrap support for H2XNU4 as seed ortholog is 100%.
Bootstrap support for H3DGL0 as seed ortholog is 100%.

Group of orthologs #4036. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:80

F6ZIG5              	100.00%		H3C885              	100.00%
                    	       		H3CSA3              	24.37%
Bootstrap support for F6ZIG5 as seed ortholog is 100%.
Bootstrap support for H3C885 as seed ortholog is 94%.

Group of orthologs #4037. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

H2XPT5              	100.00%		H3CAS1              	100.00%
                    	       		H3C8J1              	48.98%
Bootstrap support for H2XPT5 as seed ortholog is 100%.
Bootstrap support for H3CAS1 as seed ortholog is 100%.

Group of orthologs #4038. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:50

F6S8X6              	100.00%		Q4TBZ2              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for Q4TBZ2 as seed ortholog is 99%.

Group of orthologs #4039. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

H2XLM9              	100.00%		Q4T9Q0              	100.00%
                    	       		Q4S5R7              	16.67%
Bootstrap support for H2XLM9 as seed ortholog is 100%.
Bootstrap support for Q4T9Q0 as seed ortholog is 100%.

Group of orthologs #4040. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

F6RKZ8              	100.00%		H3C6E4              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for H3C6E4 as seed ortholog is 100%.

Group of orthologs #4041. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

F6VFA0              	100.00%		H3CBB3              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for H3CBB3 as seed ortholog is 100%.

Group of orthologs #4042. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:170

F6UP73              	100.00%		H3CFP0              	100.00%
Bootstrap support for F6UP73 as seed ortholog is 99%.
Bootstrap support for H3CFP0 as seed ortholog is 100%.

Group of orthologs #4043. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

F7BKJ3              	100.00%		H3BW83              	100.00%
Bootstrap support for F7BKJ3 as seed ortholog is 100%.
Bootstrap support for H3BW83 as seed ortholog is 100%.

Group of orthologs #4044. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

H2XZI6              	100.00%		H3BX96              	100.00%
Bootstrap support for H2XZI6 as seed ortholog is 100%.
Bootstrap support for H3BX96 as seed ortholog is 100%.

Group of orthologs #4045. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

F7BHN2              	100.00%		H3D3C1              	100.00%
Bootstrap support for F7BHN2 as seed ortholog is 100%.
Bootstrap support for H3D3C1 as seed ortholog is 100%.

Group of orthologs #4046. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:124

H2XW02              	100.00%		H3D2E9              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for H3D2E9 as seed ortholog is 100%.

Group of orthologs #4047. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

H2XSU4              	100.00%		H3D6S8              	100.00%
Bootstrap support for H2XSU4 as seed ortholog is 100%.
Bootstrap support for H3D6S8 as seed ortholog is 100%.

Group of orthologs #4048. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:170

H2XWH6              	100.00%		H3DD38              	100.00%
Bootstrap support for H2XWH6 as seed ortholog is 100%.
Bootstrap support for H3DD38 as seed ortholog is 100%.

Group of orthologs #4049. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:83

H2XXB3              	100.00%		H3DJZ7              	100.00%
Bootstrap support for H2XXB3 as seed ortholog is 99%.
Bootstrap support for H3DJZ7 as seed ortholog is 99%.

Group of orthologs #4050. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 T.nigroviridis:76

Q4H336              	100.00%		Q4S4V1              	100.00%
Bootstrap support for Q4H336 as seed ortholog is 100%.
Bootstrap support for Q4S4V1 as seed ortholog is 98%.

Group of orthologs #4051. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F7B2W7              	100.00%		H3CS40              	100.00%
                    	       		H3DKV4              	20.60%
Bootstrap support for F7B2W7 as seed ortholog is 100%.
Bootstrap support for H3CS40 as seed ortholog is 100%.

Group of orthologs #4052. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

H2XMT6              	100.00%		H3D0S3              	100.00%
                    	       		H3CU30              	22.42%
Bootstrap support for H2XMT6 as seed ortholog is 100%.
Bootstrap support for H3D0S3 as seed ortholog is 100%.

Group of orthologs #4053. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:169

F6VUV2              	100.00%		H3CCN5              	100.00%
Bootstrap support for F6VUV2 as seed ortholog is 98%.
Bootstrap support for H3CCN5 as seed ortholog is 100%.

Group of orthologs #4054. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F6SCJ9              	100.00%		H3CSE8              	100.00%
Bootstrap support for F6SCJ9 as seed ortholog is 100%.
Bootstrap support for H3CSE8 as seed ortholog is 100%.

Group of orthologs #4055. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F7ASV3              	100.00%		H3CBY9              	100.00%
Bootstrap support for F7ASV3 as seed ortholog is 100%.
Bootstrap support for H3CBY9 as seed ortholog is 100%.

Group of orthologs #4056. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F6UIL0              	100.00%		H3D611              	100.00%
Bootstrap support for F6UIL0 as seed ortholog is 100%.
Bootstrap support for H3D611 as seed ortholog is 100%.

Group of orthologs #4057. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F7BNU5              	100.00%		H3CG50              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for H3CG50 as seed ortholog is 100%.

Group of orthologs #4058. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F6PSG3              	100.00%		Q4RGT9              	100.00%
Bootstrap support for F6PSG3 as seed ortholog is 100%.
Bootstrap support for Q4RGT9 as seed ortholog is 100%.

Group of orthologs #4059. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:123

H2XUX5              	100.00%		H3CFT6              	100.00%
Bootstrap support for H2XUX5 as seed ortholog is 90%.
Bootstrap support for H3CFT6 as seed ortholog is 100%.

Group of orthologs #4060. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F6U899              	100.00%		Q4RX41              	100.00%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for Q4RX41 as seed ortholog is 100%.

Group of orthologs #4061. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F6UC03              	100.00%		Q4S0Q0              	100.00%
Bootstrap support for F6UC03 as seed ortholog is 100%.
Bootstrap support for Q4S0Q0 as seed ortholog is 100%.

Group of orthologs #4062. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

F6U5E5              	100.00%		Q4SNQ2              	100.00%
Bootstrap support for F6U5E5 as seed ortholog is 100%.
Bootstrap support for Q4SNQ2 as seed ortholog is 100%.

Group of orthologs #4063. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

H2XXQ7              	100.00%		H3CL02              	100.00%
Bootstrap support for H2XXQ7 as seed ortholog is 100%.
Bootstrap support for H3CL02 as seed ortholog is 100%.

Group of orthologs #4064. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

H2XXU4              	100.00%		H3DIF1              	100.00%
Bootstrap support for H2XXU4 as seed ortholog is 100%.
Bootstrap support for H3DIF1 as seed ortholog is 100%.

Group of orthologs #4065. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 T.nigroviridis:169

H2Y2E7              	100.00%		Q4S0H8              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 100%.
Bootstrap support for Q4S0H8 as seed ortholog is 100%.

Group of orthologs #4066. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6TNN0              	100.00%		H3C657              	100.00%
                    	       		H3CBV1              	16.03%
                    	       		H3BXW6              	11.20%
                    	       		H3DHT7              	7.83%
Bootstrap support for F6TNN0 as seed ortholog is 100%.
Bootstrap support for H3C657 as seed ortholog is 100%.

Group of orthologs #4067. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F7A4X9              	100.00%		H3BWZ9              	100.00%
                    	       		H3CQK3              	7.74%
                    	       		H3BX30              	5.68%
Bootstrap support for F7A4X9 as seed ortholog is 100%.
Bootstrap support for H3BWZ9 as seed ortholog is 100%.

Group of orthologs #4068. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6XKH4              	100.00%		Q4SJT1              	100.00%
                    	       		H3DBZ7              	50.61%
                    	       		H3DLH9              	39.85%
Bootstrap support for F6XKH4 as seed ortholog is 100%.
Bootstrap support for Q4SJT1 as seed ortholog is 100%.

Group of orthologs #4069. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:33

F6RL73              	100.00%		H3D4L9              	100.00%
                    	       		H3CIN9              	14.09%
Bootstrap support for F6RL73 as seed ortholog is 100%.
Bootstrap support for H3D4L9 as seed ortholog is 91%.

Group of orthologs #4070. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:51

F6PTF9              	100.00%		H3C1R3              	100.00%
Bootstrap support for F6PTF9 as seed ortholog is 100%.
Bootstrap support for H3C1R3 as seed ortholog is 83%.

Group of orthologs #4071. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6SWZ3              	100.00%		H3CX89              	100.00%
Bootstrap support for F6SWZ3 as seed ortholog is 100%.
Bootstrap support for H3CX89 as seed ortholog is 100%.

Group of orthologs #4072. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6YNK9              	100.00%		H3CFQ7              	100.00%
Bootstrap support for F6YNK9 as seed ortholog is 100%.
Bootstrap support for H3CFQ7 as seed ortholog is 100%.

Group of orthologs #4073. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:50

F7B1K2              	100.00%		H3CKL1              	100.00%
Bootstrap support for F7B1K2 as seed ortholog is 82%.
Bootstrap support for H3CKL1 as seed ortholog is 94%.

Group of orthologs #4074. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6WEG7              	100.00%		H3DGW7              	100.00%
Bootstrap support for F6WEG7 as seed ortholog is 100%.
Bootstrap support for H3DGW7 as seed ortholog is 100%.

Group of orthologs #4075. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:108

F6X2L1              	100.00%		H3DP47              	100.00%
Bootstrap support for F6X2L1 as seed ortholog is 99%.
Bootstrap support for H3DP47 as seed ortholog is 99%.

Group of orthologs #4076. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6ZE60              	100.00%		H3DJX4              	100.00%
Bootstrap support for F6ZE60 as seed ortholog is 100%.
Bootstrap support for H3DJX4 as seed ortholog is 100%.

Group of orthologs #4077. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

F6WQD2              	100.00%		Q4T7V7              	100.00%
Bootstrap support for F6WQD2 as seed ortholog is 100%.
Bootstrap support for Q4T7V7 as seed ortholog is 100%.

Group of orthologs #4078. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

H2Y139              	100.00%		H3CRA2              	100.00%
Bootstrap support for H2Y139 as seed ortholog is 100%.
Bootstrap support for H3CRA2 as seed ortholog is 100%.

Group of orthologs #4079. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

H2XWE7              	100.00%		H3D0V6              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for H3D0V6 as seed ortholog is 100%.

Group of orthologs #4080. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

H2XZF3              	100.00%		H3DKA3              	100.00%
Bootstrap support for H2XZF3 as seed ortholog is 100%.
Bootstrap support for H3DKA3 as seed ortholog is 100%.

Group of orthologs #4081. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 T.nigroviridis:168

H2XVJ2              	100.00%		Q4SCJ6              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for Q4SCJ6 as seed ortholog is 100%.

Group of orthologs #4082. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:168

Q8IAC7              	100.00%		Q4S4Y2              	100.00%
Bootstrap support for Q8IAC7 as seed ortholog is 100%.
Bootstrap support for Q4S4Y2 as seed ortholog is 100%.

Group of orthologs #4083. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:57

F7BJE1              	100.00%		Q4T5P6              	100.00%
                    	       		H3C166              	12.80%
                    	       		H3CDY8              	6.40%
Bootstrap support for F7BJE1 as seed ortholog is 100%.
Bootstrap support for Q4T5P6 as seed ortholog is 99%.

Group of orthologs #4084. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

F6S2Y7              	100.00%		H3DL09              	100.00%
                    	       		H3CUA8              	24.56%
Bootstrap support for F6S2Y7 as seed ortholog is 100%.
Bootstrap support for H3DL09 as seed ortholog is 100%.

Group of orthologs #4085. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

H2Y104              	100.00%		H3CK22              	100.00%
                    	       		H3C226              	13.02%
Bootstrap support for H2Y104 as seed ortholog is 100%.
Bootstrap support for H3CK22 as seed ortholog is 100%.

Group of orthologs #4086. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

H2Y026              	100.00%		Q4RPB3              	100.00%
                    	       		H3CFG9              	19.28%
Bootstrap support for H2Y026 as seed ortholog is 100%.
Bootstrap support for Q4RPB3 as seed ortholog is 100%.

Group of orthologs #4087. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

F7B9T1              	100.00%		H3CDF4              	100.00%
Bootstrap support for F7B9T1 as seed ortholog is 100%.
Bootstrap support for H3CDF4 as seed ortholog is 100%.

Group of orthologs #4088. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

F6WII1              	100.00%		H3CWE9              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for H3CWE9 as seed ortholog is 100%.

Group of orthologs #4089. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

F6UBS8              	100.00%		H3D9Z0              	100.00%
Bootstrap support for F6UBS8 as seed ortholog is 100%.
Bootstrap support for H3D9Z0 as seed ortholog is 100%.

Group of orthologs #4090. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

H2XP53              	100.00%		H3CNY7              	100.00%
Bootstrap support for H2XP53 as seed ortholog is 100%.
Bootstrap support for H3CNY7 as seed ortholog is 100%.

Group of orthologs #4091. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 T.nigroviridis:167

H2XW88              	100.00%		Q4SQJ1              	100.00%
Bootstrap support for H2XW88 as seed ortholog is 100%.
Bootstrap support for Q4SQJ1 as seed ortholog is 100%.

Group of orthologs #4092. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

F6W2W8              	100.00%		H3C2K3              	100.00%
                    	       		Q8AY99              	39.14%
                    	       		H3BZB7              	16.71%
Bootstrap support for F6W2W8 as seed ortholog is 100%.
Bootstrap support for H3C2K3 as seed ortholog is 100%.

Group of orthologs #4093. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

F6PVE7              	100.00%		H3CRM9              	100.00%
                    	       		H3D131              	100.00%
                    	       		H3CA46              	16.84%
Bootstrap support for F6PVE7 as seed ortholog is 100%.
Bootstrap support for H3CRM9 as seed ortholog is 100%.
Bootstrap support for H3D131 as seed ortholog is 100%.

Group of orthologs #4094. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

H2XPU1              	100.00%		H3BZP6              	100.00%
                    	       		H3CP73              	23.32%
                    	       		H3C448              	22.01%
Bootstrap support for H2XPU1 as seed ortholog is 100%.
Bootstrap support for H3BZP6 as seed ortholog is 100%.

Group of orthologs #4095. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

Q4H3A8              	100.00%		H3DRG1              	100.00%
                    	       		H3CV43              	15.57%
                    	       		Q4S1Q2              	6.17%
Bootstrap support for Q4H3A8 as seed ortholog is 100%.
Bootstrap support for H3DRG1 as seed ortholog is 100%.

Group of orthologs #4096. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:56

F6YB59              	100.00%		H3DI94              	100.00%
                    	       		H3C924              	22.82%
Bootstrap support for F6YB59 as seed ortholog is 100%.
Bootstrap support for H3DI94 as seed ortholog is 93%.

Group of orthologs #4097. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:48

Q1RLE5              	100.00%		H3CLD9              	100.00%
                    	       		H3DMN8              	7.47%
Bootstrap support for Q1RLE5 as seed ortholog is 90%.
Bootstrap support for H3CLD9 as seed ortholog is 87%.

Group of orthologs #4098. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 T.nigroviridis:19

F6ZJ76              	100.00%		H3DPR6              	100.00%
                    	       		H3D8D6              	6.62%
Bootstrap support for F6ZJ76 as seed ortholog is 78%.
Bootstrap support for H3DPR6 as seed ortholog is 70%.
Alternative seed ortholog is H3DFI7 (19 bits away from this cluster)

Group of orthologs #4099. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

Q1RQ12              	100.00%		H3D4B7              	100.00%
                    	       		Q4T795              	91.99%
Bootstrap support for Q1RQ12 as seed ortholog is 100%.
Bootstrap support for H3D4B7 as seed ortholog is 100%.

Group of orthologs #4100. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

F6R1F8              	100.00%		H3D147              	100.00%
Bootstrap support for F6R1F8 as seed ortholog is 100%.
Bootstrap support for H3D147 as seed ortholog is 100%.

Group of orthologs #4101. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:39

F6TM04              	100.00%		H3CXU8              	100.00%
Bootstrap support for F6TM04 as seed ortholog is 100%.
Bootstrap support for H3CXU8 as seed ortholog is 89%.

Group of orthologs #4102. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

F6ZIQ8              	100.00%		H3CDG2              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for H3CDG2 as seed ortholog is 100%.

Group of orthologs #4103. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

F6TMY9              	100.00%		H3DEQ7              	100.00%
Bootstrap support for F6TMY9 as seed ortholog is 100%.
Bootstrap support for H3DEQ7 as seed ortholog is 100%.

Group of orthologs #4104. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 T.nigroviridis:166

F6YDE8              	100.00%		H3D4N2              	100.00%
Bootstrap support for F6YDE8 as seed ortholog is 100%.
Bootstrap support for H3D4N2 as seed ortholog is 100%.

Group of orthologs #4105. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:165

H2XJL5              	100.00%		H3CQI1              	100.00%
H2XQE2              	62.31%		Q4STY0              	28.04%
H2XLT4              	56.99%		
Bootstrap support for H2XJL5 as seed ortholog is 99%.
Bootstrap support for H3CQI1 as seed ortholog is 100%.

Group of orthologs #4106. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:64

H2XWE8              	100.00%		H3CQ21              	100.00%
                    	       		H3DII4              	26.99%
                    	       		H3CR08              	24.10%
                    	       		H3CL12              	15.66%
Bootstrap support for H2XWE8 as seed ortholog is 100%.
Bootstrap support for H3CQ21 as seed ortholog is 93%.

Group of orthologs #4107. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:93

F6Y4L7              	100.00%		H3CFC7              	100.00%
                    	       		H3CZB8              	24.44%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for H3CFC7 as seed ortholog is 99%.

Group of orthologs #4108. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:120

H2XNX1              	100.00%		H3DBP5              	100.00%
                    	       		H3CSK5              	53.24%
Bootstrap support for H2XNX1 as seed ortholog is 96%.
Bootstrap support for H3DBP5 as seed ortholog is 100%.

Group of orthologs #4109. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:35

F6S5T2              	100.00%		H3DCD7              	100.00%
Bootstrap support for F6S5T2 as seed ortholog is 100%.
Bootstrap support for H3DCD7 as seed ortholog is 72%.
Alternative seed ortholog is H3CXD4 (35 bits away from this cluster)

Group of orthologs #4110. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:165

F6Y7W5              	100.00%		H3CW64              	100.00%
Bootstrap support for F6Y7W5 as seed ortholog is 100%.
Bootstrap support for H3CW64 as seed ortholog is 100%.

Group of orthologs #4111. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:165

H2XLZ0              	100.00%		H3CKS7              	100.00%
Bootstrap support for H2XLZ0 as seed ortholog is 98%.
Bootstrap support for H3CKS7 as seed ortholog is 100%.

Group of orthologs #4112. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:165

F6T047              	100.00%		H3DQN2              	100.00%
Bootstrap support for F6T047 as seed ortholog is 100%.
Bootstrap support for H3DQN2 as seed ortholog is 100%.

Group of orthologs #4113. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:165

F6YKG0              	100.00%		H3D8N7              	100.00%
Bootstrap support for F6YKG0 as seed ortholog is 100%.
Bootstrap support for H3D8N7 as seed ortholog is 100%.

Group of orthologs #4114. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:165

F6WPK3              	100.00%		H3DPQ4              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for H3DPQ4 as seed ortholog is 100%.

Group of orthologs #4115. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:165

Q1RL87              	100.00%		H3CJZ4              	100.00%
Bootstrap support for Q1RL87 as seed ortholog is 100%.
Bootstrap support for H3CJZ4 as seed ortholog is 100%.

Group of orthologs #4116. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 T.nigroviridis:165

H2Y1A1              	100.00%		H3DML1              	100.00%
Bootstrap support for H2Y1A1 as seed ortholog is 100%.
Bootstrap support for H3DML1 as seed ortholog is 100%.

Group of orthologs #4117. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

F6Y8H0              	100.00%		H3D782              	100.00%
                    	       		Q4S2L4              	100.00%
Bootstrap support for F6Y8H0 as seed ortholog is 100%.
Bootstrap support for H3D782 as seed ortholog is 100%.
Bootstrap support for Q4S2L4 as seed ortholog is 100%.

Group of orthologs #4118. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:164

H2XSH7              	100.00%		H3D0P7              	100.00%
H2XUF4              	8.72%		
Bootstrap support for H2XSH7 as seed ortholog is 100%.
Bootstrap support for H3D0P7 as seed ortholog is 100%.

Group of orthologs #4119. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

F6UTH5              	100.00%		H3CC04              	100.00%
Bootstrap support for F6UTH5 as seed ortholog is 100%.
Bootstrap support for H3CC04 as seed ortholog is 100%.

Group of orthologs #4120. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:16

F6ZW63              	100.00%		H3BZD7              	100.00%
Bootstrap support for F6ZW63 as seed ortholog is 100%.
Bootstrap support for H3BZD7 as seed ortholog is 68%.
Alternative seed ortholog is H3CCF5 (16 bits away from this cluster)

Group of orthologs #4121. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:67

F6TZL5              	100.00%		H3D4P4              	100.00%
Bootstrap support for F6TZL5 as seed ortholog is 94%.
Bootstrap support for H3D4P4 as seed ortholog is 97%.

Group of orthologs #4122. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:50

F6XB46              	100.00%		H3CWR5              	100.00%
Bootstrap support for F6XB46 as seed ortholog is 100%.
Bootstrap support for H3CWR5 as seed ortholog is 97%.

Group of orthologs #4123. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

F6S202              	100.00%		H3DF38              	100.00%
Bootstrap support for F6S202 as seed ortholog is 100%.
Bootstrap support for H3DF38 as seed ortholog is 100%.

Group of orthologs #4124. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

F6PRN9              	100.00%		Q4SQX0              	100.00%
Bootstrap support for F6PRN9 as seed ortholog is 100%.
Bootstrap support for Q4SQX0 as seed ortholog is 100%.

Group of orthologs #4125. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

F6WF92              	100.00%		H3DBL3              	100.00%
Bootstrap support for F6WF92 as seed ortholog is 100%.
Bootstrap support for H3DBL3 as seed ortholog is 100%.

Group of orthologs #4126. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

H2Y306              	100.00%		H3CGX6              	100.00%
Bootstrap support for H2Y306 as seed ortholog is 100%.
Bootstrap support for H3CGX6 as seed ortholog is 100%.

Group of orthologs #4127. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

F6ZA98              	100.00%		Q4TB40              	100.00%
Bootstrap support for F6ZA98 as seed ortholog is 100%.
Bootstrap support for Q4TB40 as seed ortholog is 100%.

Group of orthologs #4128. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 T.nigroviridis:164

H2XXS3              	100.00%		H3DDV6              	100.00%
Bootstrap support for H2XXS3 as seed ortholog is 100%.
Bootstrap support for H3DDV6 as seed ortholog is 100%.

Group of orthologs #4129. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:107

F7BHU7              	100.00%		Q4RIJ0              	100.00%
F6Z1X1              	100.00%		H3CSL9              	100.00%
F6Z1X8              	100.00%		H3DE36              	100.00%
                    	       		H3C3M6              	36.47%
                    	       		H3DDX4              	33.03%
                    	       		H3DLL1              	32.91%
                    	       		H3CRK8              	29.86%
Bootstrap support for F7BHU7 as seed ortholog is 87%.
Bootstrap support for F6Z1X1 as seed ortholog is 87%.
Bootstrap support for F6Z1X8 as seed ortholog is 75%.
Bootstrap support for Q4RIJ0 as seed ortholog is 99%.
Bootstrap support for H3CSL9 as seed ortholog is 89%.
Bootstrap support for H3DE36 as seed ortholog is 95%.

Group of orthologs #4130. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 T.nigroviridis:18

H2XKQ7              	100.00%		H3CNU4              	100.00%
H2Y1F4              	15.75%		H3CUA2              	63.65%
                    	       		H3C5M0              	48.78%
                    	       		H3C0R3              	47.08%
Bootstrap support for H2XKQ7 as seed ortholog is 92%.
Bootstrap support for H3CNU4 as seed ortholog is 71%.
Alternative seed ortholog is H3CHS5 (18 bits away from this cluster)

Group of orthologs #4131. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:77

F6Q3Z9              	100.00%		H3D2Z3              	100.00%
Bootstrap support for F6Q3Z9 as seed ortholog is 99%.
Bootstrap support for H3D2Z3 as seed ortholog is 98%.

Group of orthologs #4132. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

F6WT81              	100.00%		H3CJG5              	100.00%
Bootstrap support for F6WT81 as seed ortholog is 100%.
Bootstrap support for H3CJG5 as seed ortholog is 100%.

Group of orthologs #4133. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

F6UFD0              	100.00%		H3D4H9              	100.00%
Bootstrap support for F6UFD0 as seed ortholog is 100%.
Bootstrap support for H3D4H9 as seed ortholog is 100%.

Group of orthologs #4134. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

F6YGF2              	100.00%		H3CTV3              	100.00%
Bootstrap support for F6YGF2 as seed ortholog is 100%.
Bootstrap support for H3CTV3 as seed ortholog is 100%.

Group of orthologs #4135. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

F6TK09              	100.00%		H3DAP1              	100.00%
Bootstrap support for F6TK09 as seed ortholog is 100%.
Bootstrap support for H3DAP1 as seed ortholog is 100%.

Group of orthologs #4136. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:163

F6SRF9              	100.00%		Q4T8R7              	100.00%
Bootstrap support for F6SRF9 as seed ortholog is 94%.
Bootstrap support for Q4T8R7 as seed ortholog is 100%.

Group of orthologs #4137. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:11

F7BCE0              	100.00%		H3DDK1              	100.00%
Bootstrap support for F7BCE0 as seed ortholog is 39%.
Alternative seed ortholog is F6UMK0 (8 bits away from this cluster)
Bootstrap support for H3DDK1 as seed ortholog is 60%.
Alternative seed ortholog is H3CQQ3 (11 bits away from this cluster)

Group of orthologs #4138. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:71

H2XJN2              	100.00%		H3DBX0              	100.00%
Bootstrap support for H2XJN2 as seed ortholog is 100%.
Bootstrap support for H3DBX0 as seed ortholog is 98%.

Group of orthologs #4139. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

H2XXH2              	100.00%		H3D779              	100.00%
Bootstrap support for H2XXH2 as seed ortholog is 100%.
Bootstrap support for H3D779 as seed ortholog is 100%.

Group of orthologs #4140. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:14

H2XR06              	100.00%		H3DGS3              	100.00%
Bootstrap support for H2XR06 as seed ortholog is 100%.
Bootstrap support for H3DGS3 as seed ortholog is 69%.
Alternative seed ortholog is H3CP34 (14 bits away from this cluster)

Group of orthologs #4141. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:3

H2XTD6              	100.00%		H3DF24              	100.00%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for H3DF24 as seed ortholog is 56%.
Alternative seed ortholog is H3CEU4 (3 bits away from this cluster)

Group of orthologs #4142. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

F7ATY3              	100.00%		Q4TC39              	100.00%
Bootstrap support for F7ATY3 as seed ortholog is 100%.
Bootstrap support for Q4TC39 as seed ortholog is 100%.

Group of orthologs #4143. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 T.nigroviridis:163

H2XZ57              	100.00%		H3DBV1              	100.00%
Bootstrap support for H2XZ57 as seed ortholog is 100%.
Bootstrap support for H3DBV1 as seed ortholog is 100%.

Group of orthologs #4144. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:18

F6TMF8              	100.00%		H3DKJ0              	100.00%
                    	       		H3DK90              	19.11%
                    	       		H3DHM1              	8.05%
                    	       		H3CDU3              	6.18%
Bootstrap support for F6TMF8 as seed ortholog is 98%.
Bootstrap support for H3DKJ0 as seed ortholog is 73%.
Alternative seed ortholog is H3CFM4 (18 bits away from this cluster)

Group of orthologs #4145. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:52

F6Q1C2              	100.00%		H3C2C5              	100.00%
                    	       		H3CYS3              	25.83%
                    	       		H3CT62              	21.85%
Bootstrap support for F6Q1C2 as seed ortholog is 99%.
Bootstrap support for H3C2C5 as seed ortholog is 93%.

Group of orthologs #4146. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:162

H2XNQ0              	100.00%		H3DMR1              	100.00%
F7AV41              	7.85%		
F6YFF3              	5.74%		
Bootstrap support for H2XNQ0 as seed ortholog is 81%.
Bootstrap support for H3DMR1 as seed ortholog is 100%.

Group of orthologs #4147. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

F6TAY9              	100.00%		H3CPZ5              	100.00%
Bootstrap support for F6TAY9 as seed ortholog is 100%.
Bootstrap support for H3CPZ5 as seed ortholog is 100%.

Group of orthologs #4148. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

F6UB97              	100.00%		H3D062              	100.00%
Bootstrap support for F6UB97 as seed ortholog is 100%.
Bootstrap support for H3D062 as seed ortholog is 100%.

Group of orthologs #4149. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

F6SVB2              	100.00%		H3DIC2              	100.00%
Bootstrap support for F6SVB2 as seed ortholog is 100%.
Bootstrap support for H3DIC2 as seed ortholog is 100%.

Group of orthologs #4150. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

H2XV81              	100.00%		H3C823              	100.00%
Bootstrap support for H2XV81 as seed ortholog is 100%.
Bootstrap support for H3C823 as seed ortholog is 100%.

Group of orthologs #4151. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:86

H2XKH1              	100.00%		H3CY13              	100.00%
Bootstrap support for H2XKH1 as seed ortholog is 100%.
Bootstrap support for H3CY13 as seed ortholog is 97%.

Group of orthologs #4152. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

F6UN42              	100.00%		Q4RTW8              	100.00%
Bootstrap support for F6UN42 as seed ortholog is 100%.
Bootstrap support for Q4RTW8 as seed ortholog is 100%.

Group of orthologs #4153. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:71

F6YV26              	100.00%		Q6EV18              	100.00%
Bootstrap support for F6YV26 as seed ortholog is 100%.
Bootstrap support for Q6EV18 as seed ortholog is 97%.

Group of orthologs #4154. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

F7AMW5              	100.00%		Q4S7R4              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for Q4S7R4 as seed ortholog is 100%.

Group of orthologs #4155. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

H2Y3H8              	100.00%		H3D5T8              	100.00%
Bootstrap support for H2Y3H8 as seed ortholog is 100%.
Bootstrap support for H3D5T8 as seed ortholog is 100%.

Group of orthologs #4156. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

H2XXX0              	100.00%		H3DFZ0              	100.00%
Bootstrap support for H2XXX0 as seed ortholog is 100%.
Bootstrap support for H3DFZ0 as seed ortholog is 100%.

Group of orthologs #4157. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 T.nigroviridis:162

Q1RL40              	100.00%		H3DIY7              	100.00%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for H3DIY7 as seed ortholog is 100%.

Group of orthologs #4158. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:79

H2XVK3              	100.00%		Q4T4K5              	100.00%
                    	       		H3DCE9              	24.28%
                    	       		H3D0K8              	18.85%
                    	       		H3D4M9              	14.70%
Bootstrap support for H2XVK3 as seed ortholog is 100%.
Bootstrap support for Q4T4K5 as seed ortholog is 99%.

Group of orthologs #4159. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

H2XPE8              	100.00%		H3D842              	100.00%
                    	       		H3CVJ1              	30.63%
                    	       		H3D5Y9              	28.75%
Bootstrap support for H2XPE8 as seed ortholog is 100%.
Bootstrap support for H3D842 as seed ortholog is 100%.

Group of orthologs #4160. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 T.nigroviridis:9

F6XMN3              	100.00%		H3C1B1              	100.00%
                    	       		H3CTP9              	32.94%
Bootstrap support for F6XMN3 as seed ortholog is 76%.
Bootstrap support for H3C1B1 as seed ortholog is 65%.
Alternative seed ortholog is H3DLT7 (9 bits away from this cluster)

Group of orthologs #4161. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

F6U8M1              	100.00%		H3CHU9              	100.00%
                    	       		H3C6T1              	12.12%
Bootstrap support for F6U8M1 as seed ortholog is 100%.
Bootstrap support for H3CHU9 as seed ortholog is 100%.

Group of orthologs #4162. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:92

H2XZB8              	100.00%		H3DHW8              	100.00%
                    	       		H3C3P9              	18.28%
Bootstrap support for H2XZB8 as seed ortholog is 99%.
Bootstrap support for H3DHW8 as seed ortholog is 99%.

Group of orthologs #4163. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

H2Y2V5              	100.00%		H3DLC2              	100.00%
                    	       		H3D6Y3              	9.23%
Bootstrap support for H2Y2V5 as seed ortholog is 100%.
Bootstrap support for H3DLC2 as seed ortholog is 100%.

Group of orthologs #4164. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

F6SKW2              	100.00%		H3CD09              	100.00%
Bootstrap support for F6SKW2 as seed ortholog is 100%.
Bootstrap support for H3CD09 as seed ortholog is 100%.

Group of orthologs #4165. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:31

F6V1C0              	100.00%		H3CP45              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for H3CP45 as seed ortholog is 90%.

Group of orthologs #4166. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

F6Z8R5              	100.00%		H3CMP5              	100.00%
Bootstrap support for F6Z8R5 as seed ortholog is 100%.
Bootstrap support for H3CMP5 as seed ortholog is 100%.

Group of orthologs #4167. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

F6X9L5              	100.00%		H3D800              	100.00%
Bootstrap support for F6X9L5 as seed ortholog is 100%.
Bootstrap support for H3D800 as seed ortholog is 100%.

Group of orthologs #4168. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 T.nigroviridis:161

F7B5M3              	100.00%		H3DDT5              	100.00%
Bootstrap support for F7B5M3 as seed ortholog is 100%.
Bootstrap support for H3DDT5 as seed ortholog is 100%.

Group of orthologs #4169. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

F6S021              	100.00%		H3CIY7              	100.00%
F6YNR2              	13.37%		
H2XNE6              	5.19%		
Bootstrap support for F6S021 as seed ortholog is 100%.
Bootstrap support for H3CIY7 as seed ortholog is 100%.

Group of orthologs #4170. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:51

F7BLX7              	100.00%		H3CNB1              	100.00%
                    	       		H3CXW1              	32.49%
Bootstrap support for F7BLX7 as seed ortholog is 100%.
Bootstrap support for H3CNB1 as seed ortholog is 93%.

Group of orthologs #4171. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

F6UYB4              	100.00%		H3C8K9              	100.00%
Bootstrap support for F6UYB4 as seed ortholog is 100%.
Bootstrap support for H3C8K9 as seed ortholog is 100%.

Group of orthologs #4172. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

F6R6M9              	100.00%		H3CRN0              	100.00%
Bootstrap support for F6R6M9 as seed ortholog is 100%.
Bootstrap support for H3CRN0 as seed ortholog is 100%.

Group of orthologs #4173. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

F6TJ31              	100.00%		H3CUW0              	100.00%
Bootstrap support for F6TJ31 as seed ortholog is 100%.
Bootstrap support for H3CUW0 as seed ortholog is 100%.

Group of orthologs #4174. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:63

H2XLZ2              	100.00%		H3C2C4              	100.00%
Bootstrap support for H2XLZ2 as seed ortholog is 99%.
Bootstrap support for H3C2C4 as seed ortholog is 99%.

Group of orthologs #4175. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:24

F7B4F4              	100.00%		H3CB82              	100.00%
Bootstrap support for F7B4F4 as seed ortholog is 100%.
Bootstrap support for H3CB82 as seed ortholog is 72%.
Alternative seed ortholog is H3CX01 (24 bits away from this cluster)

Group of orthologs #4176. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:160

F6WR70              	100.00%		H3CSK4              	100.00%
Bootstrap support for F6WR70 as seed ortholog is 99%.
Bootstrap support for H3CSK4 as seed ortholog is 100%.

Group of orthologs #4177. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:32

H2XMB4              	100.00%		H3CGE7              	100.00%
Bootstrap support for H2XMB4 as seed ortholog is 100%.
Bootstrap support for H3CGE7 as seed ortholog is 82%.

Group of orthologs #4178. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

F6VQE7              	100.00%		H3D9M4              	100.00%
Bootstrap support for F6VQE7 as seed ortholog is 100%.
Bootstrap support for H3D9M4 as seed ortholog is 100%.

Group of orthologs #4179. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:115

F7AI05              	100.00%		H3CWG3              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for H3CWG3 as seed ortholog is 100%.

Group of orthologs #4180. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

H2XRT6              	100.00%		H3CNC0              	100.00%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for H3CNC0 as seed ortholog is 100%.

Group of orthologs #4181. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

H2Y0B1              	100.00%		H3CFX0              	100.00%
Bootstrap support for H2Y0B1 as seed ortholog is 100%.
Bootstrap support for H3CFX0 as seed ortholog is 100%.

Group of orthologs #4182. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:160

H2XT41              	100.00%		H3CRE4              	100.00%
Bootstrap support for H2XT41 as seed ortholog is 100%.
Bootstrap support for H3CRE4 as seed ortholog is 100%.

Group of orthologs #4183. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:23

H2Y2P7              	100.00%		H3CQV6              	100.00%
Bootstrap support for H2Y2P7 as seed ortholog is 92%.
Bootstrap support for H3CQV6 as seed ortholog is 76%.

Group of orthologs #4184. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 T.nigroviridis:105

H2XY81              	100.00%		H3DDK3              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for H3DDK3 as seed ortholog is 100%.

Group of orthologs #4185. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 T.nigroviridis:159

F6XEU0              	100.00%		Q4TA50              	100.00%
                    	       		H3CBJ0              	98.57%
Bootstrap support for F6XEU0 as seed ortholog is 100%.
Bootstrap support for Q4TA50 as seed ortholog is 100%.

Group of orthologs #4186. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:73

F6SJR0              	100.00%		H3CV03              	100.00%
Bootstrap support for F6SJR0 as seed ortholog is 99%.
Bootstrap support for H3CV03 as seed ortholog is 99%.

Group of orthologs #4187. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 T.nigroviridis:13

F6UTG5              	100.00%		H3CS96              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 100%.
Bootstrap support for H3CS96 as seed ortholog is 75%.

Group of orthologs #4188. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:158

F6T511              	100.00%		Q4S2M7              	100.00%
F6T518              	29.97%		
F6T526              	20.18%		
H2XY48              	18.99%		
F6T505              	14.69%		
Bootstrap support for F6T511 as seed ortholog is 97%.
Bootstrap support for Q4S2M7 as seed ortholog is 100%.

Group of orthologs #4189. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:15

F6PSX9              	100.00%		Q4RKF2              	100.00%
F6PSZ6              	18.80%		
Bootstrap support for F6PSX9 as seed ortholog is 100%.
Bootstrap support for Q4RKF2 as seed ortholog is 65%.
Alternative seed ortholog is H3C3H5 (15 bits away from this cluster)

Group of orthologs #4190. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

H2XSN9              	100.00%		H3CXP7              	100.00%
                    	       		H3CY09              	15.12%
Bootstrap support for H2XSN9 as seed ortholog is 100%.
Bootstrap support for H3CXP7 as seed ortholog is 100%.

Group of orthologs #4191. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

H2XST1              	100.00%		H3D432              	100.00%
                    	       		H3CWQ6              	19.35%
Bootstrap support for H2XST1 as seed ortholog is 100%.
Bootstrap support for H3D432 as seed ortholog is 100%.

Group of orthologs #4192. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

F7B8A5              	100.00%		H3DP55              	100.00%
                    	       		H3D4M7              	9.52%
Bootstrap support for F7B8A5 as seed ortholog is 100%.
Bootstrap support for H3DP55 as seed ortholog is 100%.

Group of orthologs #4193. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

F6T4T6              	100.00%		H3C0M9              	100.00%
Bootstrap support for F6T4T6 as seed ortholog is 100%.
Bootstrap support for H3C0M9 as seed ortholog is 100%.

Group of orthologs #4194. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

F6QW82              	100.00%		H3CWG2              	100.00%
Bootstrap support for F6QW82 as seed ortholog is 100%.
Bootstrap support for H3CWG2 as seed ortholog is 100%.

Group of orthologs #4195. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

H2XJZ7              	100.00%		H3CA78              	100.00%
Bootstrap support for H2XJZ7 as seed ortholog is 100%.
Bootstrap support for H3CA78 as seed ortholog is 100%.

Group of orthologs #4196. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

F6ZJ92              	100.00%		H3D2Q6              	100.00%
Bootstrap support for F6ZJ92 as seed ortholog is 100%.
Bootstrap support for H3D2Q6 as seed ortholog is 100%.

Group of orthologs #4197. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 T.nigroviridis:62

F7AZ78              	100.00%		H3DET5              	100.00%
Bootstrap support for F7AZ78 as seed ortholog is 99%.
Bootstrap support for H3DET5 as seed ortholog is 99%.

Group of orthologs #4198. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:158

F7AMQ2              	100.00%		H3DNZ2              	100.00%
Bootstrap support for F7AMQ2 as seed ortholog is 100%.
Bootstrap support for H3DNZ2 as seed ortholog is 100%.

Group of orthologs #4199. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 T.nigroviridis:116

H2Y0C3              	100.00%		Q4SKV2              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for Q4SKV2 as seed ortholog is 100%.

Group of orthologs #4200. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:157

H2XMB9              	100.00%		H3CVL3              	100.00%
                    	       		H3C335              	30.63%
Bootstrap support for H2XMB9 as seed ortholog is 100%.
Bootstrap support for H3CVL3 as seed ortholog is 100%.

Group of orthologs #4201. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:2

H2XQ56              	100.00%		H3CAY1              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for H3CAY1 as seed ortholog is 54%.
Alternative seed ortholog is H3D3I7 (2 bits away from this cluster)

Group of orthologs #4202. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:157

F6XTP5              	100.00%		H3DK96              	100.00%
Bootstrap support for F6XTP5 as seed ortholog is 100%.
Bootstrap support for H3DK96 as seed ortholog is 100%.

Group of orthologs #4203. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:157

H2XK95              	100.00%		H3DMG6              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for H3DMG6 as seed ortholog is 100%.

Group of orthologs #4204. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 T.nigroviridis:157

H2XVR3              	100.00%		Q4RET3              	100.00%
Bootstrap support for H2XVR3 as seed ortholog is 100%.
Bootstrap support for Q4RET3 as seed ortholog is 100%.

Group of orthologs #4205. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:94

F7AV59              	100.00%		H3BW12              	100.00%
F7AUP3              	58.43%		
F7AY96              	57.58%		
L7N0S5              	34.27%		
F6ZYU1              	25.00%		
Bootstrap support for F7AV59 as seed ortholog is 99%.
Bootstrap support for H3BW12 as seed ortholog is 99%.

Group of orthologs #4206. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:156

H2Y060              	100.00%		H3D0P3              	100.00%
                    	       		Q4T4T6              	56.80%
Bootstrap support for H2Y060 as seed ortholog is 99%.
Bootstrap support for H3D0P3 as seed ortholog is 100%.

Group of orthologs #4207. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:156

F7A9T3              	100.00%		H3CA08              	100.00%
Bootstrap support for F7A9T3 as seed ortholog is 100%.
Bootstrap support for H3CA08 as seed ortholog is 100%.

Group of orthologs #4208. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:156

F7AEK6              	100.00%		H3CL26              	100.00%
Bootstrap support for F7AEK6 as seed ortholog is 100%.
Bootstrap support for H3CL26 as seed ortholog is 100%.

Group of orthologs #4209. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:156

F6WCS0              	100.00%		H3D8M4              	100.00%
Bootstrap support for F6WCS0 as seed ortholog is 100%.
Bootstrap support for H3D8M4 as seed ortholog is 100%.

Group of orthologs #4210. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:156

F6QW72              	100.00%		Q4TC27              	100.00%
Bootstrap support for F6QW72 as seed ortholog is 99%.
Bootstrap support for Q4TC27 as seed ortholog is 100%.

Group of orthologs #4211. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:156

H2XWG7              	100.00%		H3CMX4              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for H3CMX4 as seed ortholog is 100%.

Group of orthologs #4212. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:93

F6ZXM0              	100.00%		H3DHA6              	100.00%
Bootstrap support for F6ZXM0 as seed ortholog is 99%.
Bootstrap support for H3DHA6 as seed ortholog is 99%.

Group of orthologs #4213. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:37

F7AGK5              	100.00%		H3DHN8              	100.00%
Bootstrap support for F7AGK5 as seed ortholog is 100%.
Bootstrap support for H3DHN8 as seed ortholog is 94%.

Group of orthologs #4214. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:156

H2XNI9              	100.00%		Q4RSP0              	100.00%
Bootstrap support for H2XNI9 as seed ortholog is 100%.
Bootstrap support for Q4RSP0 as seed ortholog is 100%.

Group of orthologs #4215. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 T.nigroviridis:156

H2XXT7              	100.00%		H3DL00              	100.00%
Bootstrap support for H2XXT7 as seed ortholog is 100%.
Bootstrap support for H3DL00 as seed ortholog is 100%.

Group of orthologs #4216. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:155

F6YLX3              	100.00%		H3D1W7              	100.00%
                    	       		H3DM63              	23.12%
Bootstrap support for F6YLX3 as seed ortholog is 100%.
Bootstrap support for H3D1W7 as seed ortholog is 100%.

Group of orthologs #4217. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:155

F6Y206              	100.00%		H3DFW6              	100.00%
                    	       		H3D582              	33.87%
Bootstrap support for F6Y206 as seed ortholog is 100%.
Bootstrap support for H3DFW6 as seed ortholog is 100%.

Group of orthologs #4218. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:155

F6Y0G1              	100.00%		H3DIZ9              	100.00%
                    	       		H3DGT4              	8.50%
Bootstrap support for F6Y0G1 as seed ortholog is 100%.
Bootstrap support for H3DIZ9 as seed ortholog is 100%.

Group of orthologs #4219. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:87

H2Y1V3              	100.00%		H3CIH6              	100.00%
                    	       		H3CV64              	14.71%
Bootstrap support for H2Y1V3 as seed ortholog is 100%.
Bootstrap support for H3CIH6 as seed ortholog is 99%.

Group of orthologs #4220. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:155

Q1RL82              	100.00%		H3CCQ5              	100.00%
Bootstrap support for Q1RL82 as seed ortholog is 100%.
Bootstrap support for H3CCQ5 as seed ortholog is 100%.

Group of orthologs #4221. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:155

H2XMY1              	100.00%		H3DAY3              	100.00%
Bootstrap support for H2XMY1 as seed ortholog is 100%.
Bootstrap support for H3DAY3 as seed ortholog is 100%.

Group of orthologs #4222. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 T.nigroviridis:155

Q4H2P0              	100.00%		H3D2A1              	100.00%
Bootstrap support for Q4H2P0 as seed ortholog is 100%.
Bootstrap support for H3D2A1 as seed ortholog is 100%.

Group of orthologs #4223. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:40

F7AEN4              	100.00%		Q4SYX0              	100.00%
                    	       		H3DEI9              	11.89%
                    	       		H3D6S9              	9.91%
Bootstrap support for F7AEN4 as seed ortholog is 100%.
Bootstrap support for Q4SYX0 as seed ortholog is 97%.

Group of orthologs #4224. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:154

F6X3B3              	100.00%		H3CDQ5              	100.00%
Bootstrap support for F6X3B3 as seed ortholog is 100%.
Bootstrap support for H3CDQ5 as seed ortholog is 100%.

Group of orthologs #4225. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:154

F6ZBR4              	100.00%		H3CLF5              	100.00%
Bootstrap support for F6ZBR4 as seed ortholog is 100%.
Bootstrap support for H3CLF5 as seed ortholog is 100%.

Group of orthologs #4226. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:110

F6YRC1              	100.00%		H3D075              	100.00%
Bootstrap support for F6YRC1 as seed ortholog is 100%.
Bootstrap support for H3D075 as seed ortholog is 100%.

Group of orthologs #4227. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 T.nigroviridis:154

F6XYQ4              	100.00%		H3DLU5              	100.00%
Bootstrap support for F6XYQ4 as seed ortholog is 100%.
Bootstrap support for H3DLU5 as seed ortholog is 100%.

Group of orthologs #4228. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:82

F6QRK3              	100.00%		H3CV09              	100.00%
                    	       		H3DM22              	13.89%
Bootstrap support for F6QRK3 as seed ortholog is 99%.
Bootstrap support for H3CV09 as seed ortholog is 99%.

Group of orthologs #4229. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:153

F6VBR9              	100.00%		H3CHS9              	100.00%
                    	       		H3CJL7              	27.24%
Bootstrap support for F6VBR9 as seed ortholog is 100%.
Bootstrap support for H3CHS9 as seed ortholog is 100%.

Group of orthologs #4230. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:153

F7BJL5              	100.00%		H3CHC0              	100.00%
                    	       		H3C9Y8              	7.77%
Bootstrap support for F7BJL5 as seed ortholog is 57%.
Alternative seed ortholog is F6PPC6 (67 bits away from this cluster)
Bootstrap support for H3CHC0 as seed ortholog is 100%.

Group of orthologs #4231. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 T.nigroviridis:39

H2XZH8              	100.00%		H3D751              	100.00%
                    	       		Q4S2Q3              	95.84%
Bootstrap support for H2XZH8 as seed ortholog is 88%.
Bootstrap support for H3D751 as seed ortholog is 95%.

Group of orthologs #4232. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:153

F6T6Y7              	100.00%		H3DKE3              	100.00%
Bootstrap support for F6T6Y7 as seed ortholog is 100%.
Bootstrap support for H3DKE3 as seed ortholog is 100%.

Group of orthologs #4233. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:153

H2XKP6              	100.00%		H3CV33              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for H3CV33 as seed ortholog is 100%.

Group of orthologs #4234. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 T.nigroviridis:15

F6YVB1              	100.00%		H3D9R4              	100.00%
Bootstrap support for F6YVB1 as seed ortholog is 66%.
Alternative seed ortholog is F6YX83 (14 bits away from this cluster)
Bootstrap support for H3D9R4 as seed ortholog is 68%.
Alternative seed ortholog is H3C3R2 (15 bits away from this cluster)

Group of orthologs #4235. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:153

F6TV26              	100.00%		Q4T3W7              	100.00%
Bootstrap support for F6TV26 as seed ortholog is 100%.
Bootstrap support for Q4T3W7 as seed ortholog is 100%.

Group of orthologs #4236. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:153

F6YHI5              	100.00%		Q4RSY4              	100.00%
Bootstrap support for F6YHI5 as seed ortholog is 100%.
Bootstrap support for Q4RSY4 as seed ortholog is 100%.

Group of orthologs #4237. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:153

F6ZQ03              	100.00%		H3DN27              	100.00%
Bootstrap support for F6ZQ03 as seed ortholog is 99%.
Bootstrap support for H3DN27 as seed ortholog is 100%.

Group of orthologs #4238. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 T.nigroviridis:153

F7BPA9              	100.00%		H3DGU5              	100.00%
Bootstrap support for F7BPA9 as seed ortholog is 100%.
Bootstrap support for H3DGU5 as seed ortholog is 100%.

Group of orthologs #4239. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 T.nigroviridis:153

F7A7T2              	100.00%		Q4RYS7              	100.00%
Bootstrap support for F7A7T2 as seed ortholog is 86%.
Bootstrap support for Q4RYS7 as seed ortholog is 100%.

Group of orthologs #4240. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:66

H2Y0G1              	100.00%		Q4T395              	100.00%
Bootstrap support for H2Y0G1 as seed ortholog is 92%.
Bootstrap support for Q4T395 as seed ortholog is 94%.

Group of orthologs #4241. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6TB84              	100.00%		H3D630              	100.00%
                    	       		H3DFQ2              	26.43%
Bootstrap support for F6TB84 as seed ortholog is 100%.
Bootstrap support for H3D630 as seed ortholog is 100%.

Group of orthologs #4242. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6RJQ4              	100.00%		H3DPR5              	100.00%
                    	       		H3DEL4              	11.67%
Bootstrap support for F6RJQ4 as seed ortholog is 100%.
Bootstrap support for H3DPR5 as seed ortholog is 100%.

Group of orthologs #4243. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 T.nigroviridis:152

H2XKL0              	100.00%		H3CVY3              	100.00%
                    	       		H3CIJ9              	8.68%
Bootstrap support for H2XKL0 as seed ortholog is 56%.
Alternative seed ortholog is H2XXC3 (4 bits away from this cluster)
Bootstrap support for H3CVY3 as seed ortholog is 100%.

Group of orthologs #4244. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6PHH7              	100.00%		H3CBI2              	100.00%
Bootstrap support for F6PHH7 as seed ortholog is 100%.
Bootstrap support for H3CBI2 as seed ortholog is 100%.

Group of orthologs #4245. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6WIJ0              	100.00%		H3C701              	100.00%
Bootstrap support for F6WIJ0 as seed ortholog is 100%.
Bootstrap support for H3C701 as seed ortholog is 100%.

Group of orthologs #4246. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6PZM1              	100.00%		H3CU49              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for H3CU49 as seed ortholog is 100%.

Group of orthologs #4247. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6URT4              	100.00%		H3CKQ3              	100.00%
Bootstrap support for F6URT4 as seed ortholog is 100%.
Bootstrap support for H3CKQ3 as seed ortholog is 100%.

Group of orthologs #4248. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6Y4F7              	100.00%		H3CJ53              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for H3CJ53 as seed ortholog is 100%.

Group of orthologs #4249. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6R2C6              	100.00%		H3DR47              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for H3DR47 as seed ortholog is 100%.

Group of orthologs #4250. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F7AZH2              	100.00%		H3CVM9              	100.00%
Bootstrap support for F7AZH2 as seed ortholog is 100%.
Bootstrap support for H3CVM9 as seed ortholog is 100%.

Group of orthologs #4251. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

F6TDH1              	100.00%		Q4SLI5              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for Q4SLI5 as seed ortholog is 100%.

Group of orthologs #4252. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 T.nigroviridis:152

H2XVQ9              	100.00%		Q4SN82              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for Q4SN82 as seed ortholog is 100%.

Group of orthologs #4253. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F6URY8              	100.00%		Q4SCI4              	100.00%
                    	       		H3BVX8              	93.57%
                    	       		H3C8N4              	92.40%
                    	       		H3C2X3              	86.55%
                    	       		H3C552              	77.78%
                    	       		H3C0E3              	76.02%
                    	       		H3DQD3              	66.67%
                    	       		H3BXI2              	54.39%
                    	       		H3BXU7              	52.05%
                    	       		H3C0G4              	50.88%
                    	       		H3BXN2              	29.82%
                    	       		Q4TFC9              	27.49%
                    	       		Q4TA80              	15.20%
                    	       		Q4TJ45              	14.62%
                    	       		H3C1Y6              	9.94%
Bootstrap support for F6URY8 as seed ortholog is 100%.
Bootstrap support for Q4SCI4 as seed ortholog is 100%.

Group of orthologs #4254. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:151

H2XQY5              	100.00%		H3CCA3              	100.00%
                    	       		H3CIQ5              	13.02%
Bootstrap support for H2XQY5 as seed ortholog is 91%.
Bootstrap support for H3CCA3 as seed ortholog is 100%.

Group of orthologs #4255. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2Y009              	100.00%		H3C720              	100.00%
                    	       		H3CLC7              	7.41%
Bootstrap support for H2Y009 as seed ortholog is 100%.
Bootstrap support for H3C720 as seed ortholog is 100%.

Group of orthologs #4256. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F6YSQ6              	100.00%		Q4SEW6              	100.00%
                    	       		H3DM31              	24.50%
Bootstrap support for F6YSQ6 as seed ortholog is 100%.
Bootstrap support for Q4SEW6 as seed ortholog is 100%.

Group of orthologs #4257. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F6RKZ1              	100.00%		H3BYS7              	100.00%
Bootstrap support for F6RKZ1 as seed ortholog is 100%.
Bootstrap support for H3BYS7 as seed ortholog is 100%.

Group of orthologs #4258. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:151

F6SXS9              	100.00%		H3D3N9              	100.00%
Bootstrap support for F6SXS9 as seed ortholog is 99%.
Bootstrap support for H3D3N9 as seed ortholog is 100%.

Group of orthologs #4259. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F6UXP7              	100.00%		H3D1H5              	100.00%
Bootstrap support for F6UXP7 as seed ortholog is 100%.
Bootstrap support for H3D1H5 as seed ortholog is 100%.

Group of orthologs #4260. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2XL05              	100.00%		H3CB08              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for H3CB08 as seed ortholog is 100%.

Group of orthologs #4261. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:95

F7B2Y0              	100.00%		H3CLI8              	100.00%
Bootstrap support for F7B2Y0 as seed ortholog is 100%.
Bootstrap support for H3CLI8 as seed ortholog is 99%.

Group of orthologs #4262. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2XM57              	100.00%		H3CJ26              	100.00%
Bootstrap support for H2XM57 as seed ortholog is 100%.
Bootstrap support for H3CJ26 as seed ortholog is 100%.

Group of orthologs #4263. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2XRV6              	100.00%		H3CHD3              	100.00%
Bootstrap support for H2XRV6 as seed ortholog is 100%.
Bootstrap support for H3CHD3 as seed ortholog is 100%.

Group of orthologs #4264. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:79

F7ACH1              	100.00%		H3CYJ1              	100.00%
Bootstrap support for F7ACH1 as seed ortholog is 97%.
Bootstrap support for H3CYJ1 as seed ortholog is 96%.

Group of orthologs #4265. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2XQB5              	100.00%		H3CRM6              	100.00%
Bootstrap support for H2XQB5 as seed ortholog is 100%.
Bootstrap support for H3CRM6 as seed ortholog is 100%.

Group of orthologs #4266. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F6UYT5              	100.00%		H3DQA2              	100.00%
Bootstrap support for F6UYT5 as seed ortholog is 100%.
Bootstrap support for H3DQA2 as seed ortholog is 100%.

Group of orthologs #4267. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

Q1JV40              	100.00%		H3CE40              	100.00%
Bootstrap support for Q1JV40 as seed ortholog is 100%.
Bootstrap support for H3CE40 as seed ortholog is 100%.

Group of orthologs #4268. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F7AFU8              	100.00%		H3DGU3              	100.00%
Bootstrap support for F7AFU8 as seed ortholog is 100%.
Bootstrap support for H3DGU3 as seed ortholog is 100%.

Group of orthologs #4269. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

F6Z5N9              	100.00%		H3DNT7              	100.00%
Bootstrap support for F6Z5N9 as seed ortholog is 100%.
Bootstrap support for H3DNT7 as seed ortholog is 100%.

Group of orthologs #4270. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:151

F6ZF76              	100.00%		Q4S0Z2              	100.00%
Bootstrap support for F6ZF76 as seed ortholog is 100%.
Bootstrap support for Q4S0Z2 as seed ortholog is 100%.

Group of orthologs #4271. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2XZ96              	100.00%		H3DD28              	100.00%
Bootstrap support for H2XZ96 as seed ortholog is 100%.
Bootstrap support for H3DD28 as seed ortholog is 100%.

Group of orthologs #4272. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:77

H2XSA5              	100.00%		Q4RKM2              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for Q4RKM2 as seed ortholog is 100%.

Group of orthologs #4273. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 T.nigroviridis:151

H2XYM5              	100.00%		H3DRD4              	100.00%
Bootstrap support for H2XYM5 as seed ortholog is 100%.
Bootstrap support for H3DRD4 as seed ortholog is 100%.

Group of orthologs #4274. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 T.nigroviridis:150

F6S1U1              	100.00%		Q4RQI9              	100.00%
                    	       		H3CV34              	51.54%
                    	       		H3D2S5              	37.12%
Bootstrap support for F6S1U1 as seed ortholog is 100%.
Bootstrap support for Q4RQI9 as seed ortholog is 100%.

Group of orthologs #4275. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 T.nigroviridis:150

F6SST4              	100.00%		H3CVD0              	100.00%
                    	       		H3CJU0              	7.93%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for H3CVD0 as seed ortholog is 100%.

Group of orthologs #4276. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 T.nigroviridis:150

H2Y216              	100.00%		H3CUI6              	100.00%
                    	       		H3DEM7              	42.54%
Bootstrap support for H2Y216 as seed ortholog is 100%.
Bootstrap support for H3CUI6 as seed ortholog is 100%.

Group of orthologs #4277. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 T.nigroviridis:150

F6SNI9              	100.00%		Q4RUU4              	100.00%
Bootstrap support for F6SNI9 as seed ortholog is 100%.
Bootstrap support for Q4RUU4 as seed ortholog is 100%.

Group of orthologs #4278. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 T.nigroviridis:150

F6VP77              	100.00%		H3DPY2              	100.00%
Bootstrap support for F6VP77 as seed ortholog is 100%.
Bootstrap support for H3DPY2 as seed ortholog is 100%.

Group of orthologs #4279. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

Q4H394              	100.00%		H3DKQ5              	100.00%
                    	       		H3CIZ6              	82.17%
                    	       		H3C4G9              	29.09%
                    	       		H3DKH8              	27.81%
Bootstrap support for Q4H394 as seed ortholog is 100%.
Bootstrap support for H3DKQ5 as seed ortholog is 100%.

Group of orthologs #4280. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

F6WKI5              	100.00%		H3D0H1              	100.00%
F6WA11              	19.22%		
Bootstrap support for F6WKI5 as seed ortholog is 100%.
Bootstrap support for H3D0H1 as seed ortholog is 100%.

Group of orthologs #4281. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

H2XX23              	100.00%		H3DIN2              	100.00%
H2Y142              	100.00%		
Bootstrap support for H2XX23 as seed ortholog is 100%.
Bootstrap support for H2Y142 as seed ortholog is 100%.
Bootstrap support for H3DIN2 as seed ortholog is 100%.

Group of orthologs #4282. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

F6QIF4              	100.00%		H3BYK7              	100.00%
Bootstrap support for F6QIF4 as seed ortholog is 100%.
Bootstrap support for H3BYK7 as seed ortholog is 100%.

Group of orthologs #4283. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

F6VE17              	100.00%		H3CG56              	100.00%
Bootstrap support for F6VE17 as seed ortholog is 100%.
Bootstrap support for H3CG56 as seed ortholog is 100%.

Group of orthologs #4284. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:106

F7A027              	100.00%		H3CBU1              	100.00%
Bootstrap support for F7A027 as seed ortholog is 100%.
Bootstrap support for H3CBU1 as seed ortholog is 99%.

Group of orthologs #4285. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

F6QPP6              	100.00%		H3DDX0              	100.00%
Bootstrap support for F6QPP6 as seed ortholog is 100%.
Bootstrap support for H3DDX0 as seed ortholog is 100%.

Group of orthologs #4286. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

F6UBQ5              	100.00%		H3DH12              	100.00%
Bootstrap support for F6UBQ5 as seed ortholog is 100%.
Bootstrap support for H3DH12 as seed ortholog is 100%.

Group of orthologs #4287. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:37

F7BE19              	100.00%		H3DD66              	100.00%
Bootstrap support for F7BE19 as seed ortholog is 100%.
Bootstrap support for H3DD66 as seed ortholog is 78%.

Group of orthologs #4288. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 T.nigroviridis:52

H2XMU3              	100.00%		H3DDM0              	100.00%
Bootstrap support for H2XMU3 as seed ortholog is 75%.
Bootstrap support for H3DDM0 as seed ortholog is 86%.

Group of orthologs #4289. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:87

H2XRR7              	100.00%		Q4RHL8              	100.00%
Bootstrap support for H2XRR7 as seed ortholog is 100%.
Bootstrap support for Q4RHL8 as seed ortholog is 99%.

Group of orthologs #4290. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

H2XTZ1              	100.00%		Q4SG99              	100.00%
Bootstrap support for H2XTZ1 as seed ortholog is 100%.
Bootstrap support for Q4SG99 as seed ortholog is 100%.

Group of orthologs #4291. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 T.nigroviridis:149

Q1RLC9              	100.00%		H3DLS5              	100.00%
Bootstrap support for Q1RLC9 as seed ortholog is 100%.
Bootstrap support for H3DLS5 as seed ortholog is 100%.

Group of orthologs #4292. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

H2XVQ5              	100.00%		Q6EV15              	100.00%
F6RQ77              	64.52%		H3DIL8              	55.45%
H2XY63              	14.63%		H3CK42              	26.67%
F6T2T0              	13.97%		H3CET1              	26.34%
F6WMW7              	13.75%		Q4T5E2              	23.25%
F6ZT75              	13.75%		H3DEF3              	18.37%
F6Q7J8              	12.86%		H3DPX9              	12.20%
F6UH52              	12.86%		
F6TC09              	12.64%		
H2XM68              	11.09%		
F6QWY0              	10.86%		
F6UDE2              	10.86%		
F6T435              	10.64%		
F6W505              	10.20%		
F7A8W7              	9.98%		
H2XN59              	9.98%		
H2XZA1              	9.53%		
F6W5Z3              	9.31%		
H2XV74              	8.87%		
F6QWZ9              	8.65%		
H2Y0V5              	8.65%		
H2Y248              	8.65%		
F6SB61              	8.20%		
F6U9D6              	8.20%		
F6TN66              	7.98%		
F7BB18              	7.98%		
H2XRW3              	7.76%		
F6XEI7              	7.54%		
Q86NA9              	7.32%		
F6XQY6              	7.10%		
F6Q1R5              	6.43%		
Q6A1F0              	6.21%		
H2XVV6              	5.10%		
Bootstrap support for H2XVQ5 as seed ortholog is 100%.
Bootstrap support for Q6EV15 as seed ortholog is 100%.

Group of orthologs #4293. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:104

H2Y0Y4              	100.00%		H3CIS5              	100.00%
                    	       		H3D0E1              	48.05%
                    	       		H3CVZ8              	41.18%
                    	       		H3C9U6              	25.03%
                    	       		H3C2J5              	24.90%
                    	       		Q4SJC9              	24.63%
                    	       		H3DFG0              	22.75%
Bootstrap support for H2Y0Y4 as seed ortholog is 100%.
Bootstrap support for H3CIS5 as seed ortholog is 99%.

Group of orthologs #4294. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F6RRB1              	100.00%		H3CQH8              	100.00%
                    	       		H3DHD2              	38.09%
                    	       		H3C135              	33.77%
Bootstrap support for F6RRB1 as seed ortholog is 100%.
Bootstrap support for H3CQH8 as seed ortholog is 100%.

Group of orthologs #4295. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F7BP70              	100.00%		H3CSV8              	100.00%
                    	       		H3CBQ4              	47.96%
Bootstrap support for F7BP70 as seed ortholog is 100%.
Bootstrap support for H3CSV8 as seed ortholog is 100%.

Group of orthologs #4296. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F6UXC1              	100.00%		H3CAG9              	100.00%
Bootstrap support for F6UXC1 as seed ortholog is 100%.
Bootstrap support for H3CAG9 as seed ortholog is 100%.

Group of orthologs #4297. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F6YHQ3              	100.00%		H3BXK0              	100.00%
Bootstrap support for F6YHQ3 as seed ortholog is 100%.
Bootstrap support for H3BXK0 as seed ortholog is 100%.

Group of orthologs #4298. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F6W8Z2              	100.00%		H3CQ79              	100.00%
Bootstrap support for F6W8Z2 as seed ortholog is 100%.
Bootstrap support for H3CQ79 as seed ortholog is 100%.

Group of orthologs #4299. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

H2XPJ3              	100.00%		H3CU57              	100.00%
Bootstrap support for H2XPJ3 as seed ortholog is 100%.
Bootstrap support for H3CU57 as seed ortholog is 100%.

Group of orthologs #4300. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F6V8Z4              	100.00%		Q4S4Q6              	100.00%
Bootstrap support for F6V8Z4 as seed ortholog is 100%.
Bootstrap support for Q4S4Q6 as seed ortholog is 100%.

Group of orthologs #4301. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

F7APY2              	100.00%		H3DAS9              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for H3DAS9 as seed ortholog is 100%.

Group of orthologs #4302. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

H2Y1W5              	100.00%		H3CHC3              	100.00%
Bootstrap support for H2Y1W5 as seed ortholog is 100%.
Bootstrap support for H3CHC3 as seed ortholog is 100%.

Group of orthologs #4303. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 T.nigroviridis:148

H2XTJ4              	100.00%		H3CVP7              	100.00%
Bootstrap support for H2XTJ4 as seed ortholog is 69%.
Alternative seed ortholog is F6UYN1 (22 bits away from this cluster)
Bootstrap support for H3CVP7 as seed ortholog is 100%.

Group of orthologs #4304. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 T.nigroviridis:148

H2XKS6              	100.00%		Q4RGD3              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for Q4RGD3 as seed ortholog is 100%.

Group of orthologs #4305. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:147

F6ZNS9              	100.00%		H3C183              	100.00%
F6ZNT5              	41.18%		H3DKM9              	68.67%
F6SQW0              	29.88%		
F6ZAA5              	28.71%		
F6XHN7              	21.41%		
F6Y7J1              	21.41%		
F6QP54              	19.06%		
F6XHS1              	17.41%		
H2XPA6              	13.65%		
F6SAU0              	12.00%		
F6ZYZ9              	9.41%		
Bootstrap support for F6ZNS9 as seed ortholog is 98%.
Bootstrap support for H3C183 as seed ortholog is 100%.

Group of orthologs #4306. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 T.nigroviridis:49

H2XJV5              	100.00%		H3CPK7              	100.00%
F6PX91              	14.67%		H3CZL2              	29.50%
                    	       		Q4RFT6              	15.47%
                    	       		Q4RFT7              	12.59%
                    	       		H3C1J6              	10.79%
                    	       		H3CAT5              	7.55%
                    	       		H3D2H5              	6.12%
                    	       		H3DQA6              	5.04%
Bootstrap support for H2XJV5 as seed ortholog is 72%.
Alternative seed ortholog is H2XV98 (20 bits away from this cluster)
Bootstrap support for H3CPK7 as seed ortholog is 95%.

Group of orthologs #4307. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:147

F6TT30              	100.00%		H3DCI1              	100.00%
                    	       		H3D0I5              	27.14%
                    	       		H3CD98              	9.05%
Bootstrap support for F6TT30 as seed ortholog is 100%.
Bootstrap support for H3DCI1 as seed ortholog is 100%.

Group of orthologs #4308. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:147

F6Y3C0              	100.00%		H3DG22              	100.00%
                    	       		H3DBI6              	27.31%
                    	       		H3CAQ8              	21.24%
Bootstrap support for F6Y3C0 as seed ortholog is 100%.
Bootstrap support for H3DG22 as seed ortholog is 100%.

Group of orthologs #4309. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:90

F7A7X6              	100.00%		H3CZL8              	100.00%
                    	       		H3CJQ2              	27.03%
Bootstrap support for F7A7X6 as seed ortholog is 100%.
Bootstrap support for H3CZL8 as seed ortholog is 100%.

Group of orthologs #4310. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:147

H2XZL8              	100.00%		H3C768              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for H3C768 as seed ortholog is 100%.

Group of orthologs #4311. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:147

F6TA08              	100.00%		H3DPS6              	100.00%
Bootstrap support for F6TA08 as seed ortholog is 100%.
Bootstrap support for H3DPS6 as seed ortholog is 100%.

Group of orthologs #4312. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:147

F6YRU6              	100.00%		H3D8H1              	100.00%
Bootstrap support for F6YRU6 as seed ortholog is 98%.
Bootstrap support for H3D8H1 as seed ortholog is 100%.

Group of orthologs #4313. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:147

H2XUF7              	100.00%		H3CL48              	100.00%
Bootstrap support for H2XUF7 as seed ortholog is 100%.
Bootstrap support for H3CL48 as seed ortholog is 100%.

Group of orthologs #4314. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:38

F6YBB2              	100.00%		H3DG45              	100.00%
Bootstrap support for F6YBB2 as seed ortholog is 99%.
Bootstrap support for H3DG45 as seed ortholog is 86%.

Group of orthologs #4315. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 T.nigroviridis:147

H2Y1A3              	100.00%		H3D641              	100.00%
Bootstrap support for H2Y1A3 as seed ortholog is 100%.
Bootstrap support for H3D641 as seed ortholog is 100%.

Group of orthologs #4316. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 T.nigroviridis:75

F6S3B3              	100.00%		H3CZ05              	100.00%
                    	       		H3BVK7              	26.13%
                    	       		H3D094              	16.58%
                    	       		H3DLI7              	9.55%
Bootstrap support for F6S3B3 as seed ortholog is 99%.
Bootstrap support for H3CZ05 as seed ortholog is 99%.

Group of orthologs #4317. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 T.nigroviridis:146

F6QIE7              	100.00%		H3CPJ0              	100.00%
                    	       		H3CIM2              	41.37%
                    	       		H3CGC4              	9.35%
Bootstrap support for F6QIE7 as seed ortholog is 56%.
Alternative seed ortholog is F7BJP4 (6 bits away from this cluster)
Bootstrap support for H3CPJ0 as seed ortholog is 100%.

Group of orthologs #4318. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:94

F6RM35              	100.00%		H3CAS5              	100.00%
                    	       		Q4RSM6              	8.09%
Bootstrap support for F6RM35 as seed ortholog is 99%.
Bootstrap support for H3CAS5 as seed ortholog is 99%.

Group of orthologs #4319. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

F6XL60              	100.00%		H3CDV9              	100.00%
                    	       		H3CA07              	8.54%
Bootstrap support for F6XL60 as seed ortholog is 100%.
Bootstrap support for H3CDV9 as seed ortholog is 100%.

Group of orthologs #4320. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

F6Q318              	100.00%		H3DIF5              	100.00%
                    	       		H3CNQ2              	16.77%
Bootstrap support for F6Q318 as seed ortholog is 100%.
Bootstrap support for H3DIF5 as seed ortholog is 100%.

Group of orthologs #4321. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:65

F7BH23              	100.00%		H3D6X3              	100.00%
                    	       		H3C502              	28.66%
Bootstrap support for F7BH23 as seed ortholog is 99%.
Bootstrap support for H3D6X3 as seed ortholog is 98%.

Group of orthologs #4322. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:71

F6XJX5              	100.00%		H3C5G8              	100.00%
Bootstrap support for F6XJX5 as seed ortholog is 99%.
Bootstrap support for H3C5G8 as seed ortholog is 97%.

Group of orthologs #4323. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

F6WS42              	100.00%		H3CYD1              	100.00%
Bootstrap support for F6WS42 as seed ortholog is 100%.
Bootstrap support for H3CYD1 as seed ortholog is 100%.

Group of orthologs #4324. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

H2XTQ3              	100.00%		H3BZJ7              	100.00%
Bootstrap support for H2XTQ3 as seed ortholog is 100%.
Bootstrap support for H3BZJ7 as seed ortholog is 100%.

Group of orthologs #4325. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

F6TTP5              	100.00%		H3DBU0              	100.00%
Bootstrap support for F6TTP5 as seed ortholog is 100%.
Bootstrap support for H3DBU0 as seed ortholog is 100%.

Group of orthologs #4326. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:59

F6TIG3              	100.00%		H3DDB2              	100.00%
Bootstrap support for F6TIG3 as seed ortholog is 99%.
Bootstrap support for H3DDB2 as seed ortholog is 98%.

Group of orthologs #4327. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:146

F6TMW1              	100.00%		Q4REG4              	100.00%
Bootstrap support for F6TMW1 as seed ortholog is 99%.
Bootstrap support for Q4REG4 as seed ortholog is 100%.

Group of orthologs #4328. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:146

F6V725              	100.00%		Q4RP78              	100.00%
Bootstrap support for F6V725 as seed ortholog is 100%.
Bootstrap support for Q4RP78 as seed ortholog is 100%.

Group of orthologs #4329. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 T.nigroviridis:13

H2XX10              	100.00%		H3CRY6              	100.00%
Bootstrap support for H2XX10 as seed ortholog is 64%.
Alternative seed ortholog is Q1RLE2 (15 bits away from this cluster)
Bootstrap support for H3CRY6 as seed ortholog is 64%.
Alternative seed ortholog is H3C9B6 (13 bits away from this cluster)

Group of orthologs #4330. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

H2XXK5              	100.00%		H3CS45              	100.00%
Bootstrap support for H2XXK5 as seed ortholog is 100%.
Bootstrap support for H3CS45 as seed ortholog is 100%.

Group of orthologs #4331. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 T.nigroviridis:146

F7B7K2              	100.00%		Q4SRW2              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for Q4SRW2 as seed ortholog is 100%.

Group of orthologs #4332. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:78

F6T0B7              	100.00%		H3CJE6              	100.00%
                    	       		H3CGV4              	19.37%
                    	       		H3BWP0              	18.67%
Bootstrap support for F6T0B7 as seed ortholog is 96%.
Bootstrap support for H3CJE6 as seed ortholog is 99%.

Group of orthologs #4333. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:145

F6X728              	100.00%		H3C5Z8              	100.00%
                    	       		H3CJJ6              	10.32%
                    	       		H3CUL9              	6.78%
Bootstrap support for F6X728 as seed ortholog is 100%.
Bootstrap support for H3C5Z8 as seed ortholog is 100%.

Group of orthologs #4334. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:84

F6TXK6              	100.00%		H3DCH4              	100.00%
                    	       		H3DDP6              	38.97%
                    	       		Q4SP57              	21.83%
Bootstrap support for F6TXK6 as seed ortholog is 99%.
Bootstrap support for H3DCH4 as seed ortholog is 99%.

Group of orthologs #4335. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:145

F6T9S9              	100.00%		H3DIC7              	100.00%
                    	       		H3C3G8              	14.02%
                    	       		H3CV20              	10.87%
Bootstrap support for F6T9S9 as seed ortholog is 100%.
Bootstrap support for H3DIC7 as seed ortholog is 100%.

Group of orthologs #4336. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:145

H2XZ02              	100.00%		H3DIN5              	100.00%
                    	       		H3CWT4              	22.22%
                    	       		H3C131              	19.19%
Bootstrap support for H2XZ02 as seed ortholog is 100%.
Bootstrap support for H3DIN5 as seed ortholog is 100%.

Group of orthologs #4337. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:145

F6Q0V4              	100.00%		H3CA22              	100.00%
                    	       		H3DGB4              	32.94%
Bootstrap support for F6Q0V4 as seed ortholog is 100%.
Bootstrap support for H3CA22 as seed ortholog is 100%.

Group of orthologs #4338. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:67

F6SSR3              	100.00%		H3C2L1              	100.00%
Bootstrap support for F6SSR3 as seed ortholog is 100%.
Bootstrap support for H3C2L1 as seed ortholog is 95%.

Group of orthologs #4339. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:145

F7AJS0              	100.00%		H3C1U0              	100.00%
Bootstrap support for F7AJS0 as seed ortholog is 100%.
Bootstrap support for H3C1U0 as seed ortholog is 100%.

Group of orthologs #4340. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:145

F6Y516              	100.00%		H3D0G5              	100.00%
Bootstrap support for F6Y516 as seed ortholog is 56%.
Alternative seed ortholog is F6XVZ5 (3 bits away from this cluster)
Bootstrap support for H3D0G5 as seed ortholog is 100%.

Group of orthologs #4341. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:145

F6Q6C3              	100.00%		Q4SSZ9              	100.00%
Bootstrap support for F6Q6C3 as seed ortholog is 100%.
Bootstrap support for Q4SSZ9 as seed ortholog is 100%.

Group of orthologs #4342. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 T.nigroviridis:145

F6ZVT2              	100.00%		H3DAR3              	100.00%
Bootstrap support for F6ZVT2 as seed ortholog is 100%.
Bootstrap support for H3DAR3 as seed ortholog is 100%.

Group of orthologs #4343. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:144

F6X245              	100.00%		Q4RG19              	100.00%
L7N0U7              	71.40%		H3DP35              	11.07%
F7BDB7              	7.52%		H3CJP2              	8.89%
H2Y252              	5.01%		
Bootstrap support for F6X245 as seed ortholog is 92%.
Bootstrap support for Q4RG19 as seed ortholog is 100%.

Group of orthologs #4344. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:144

H2XN17              	100.00%		Q4RS74              	100.00%
                    	       		H3CKR4              	41.46%
                    	       		H3C6T5              	38.44%
                    	       		H3CFZ3              	21.86%
                    	       		H3CKR5              	19.85%
Bootstrap support for H2XN17 as seed ortholog is 89%.
Bootstrap support for Q4RS74 as seed ortholog is 100%.

Group of orthologs #4345. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 T.nigroviridis:144

H2XQR2              	100.00%		H3D586              	100.00%
F6V2S0              	18.35%		
F6SZN1              	13.48%		
Bootstrap support for H2XQR2 as seed ortholog is 70%.
Alternative seed ortholog is F6XVZ5 (17 bits away from this cluster)
Bootstrap support for H3D586 as seed ortholog is 100%.

Group of orthologs #4346. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F6U930              	100.00%		H3D1T0              	100.00%
                    	       		H3CZT8              	13.25%
Bootstrap support for F6U930 as seed ortholog is 100%.
Bootstrap support for H3D1T0 as seed ortholog is 100%.

Group of orthologs #4347. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F6SEM6              	100.00%		Q4RG43              	100.00%
                    	       		H3CF75              	59.34%
Bootstrap support for F6SEM6 as seed ortholog is 100%.
Bootstrap support for Q4RG43 as seed ortholog is 100%.

Group of orthologs #4348. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F6QGW5              	100.00%		H3C749              	100.00%
Bootstrap support for F6QGW5 as seed ortholog is 100%.
Bootstrap support for H3C749 as seed ortholog is 100%.

Group of orthologs #4349. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F7BA51              	100.00%		H3C4F1              	100.00%
Bootstrap support for F7BA51 as seed ortholog is 100%.
Bootstrap support for H3C4F1 as seed ortholog is 100%.

Group of orthologs #4350. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F6VGW8              	100.00%		H3DCA2              	100.00%
Bootstrap support for F6VGW8 as seed ortholog is 100%.
Bootstrap support for H3DCA2 as seed ortholog is 100%.

Group of orthologs #4351. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

H2XX34              	100.00%		H3C8X5              	100.00%
Bootstrap support for H2XX34 as seed ortholog is 100%.
Bootstrap support for H3C8X5 as seed ortholog is 100%.

Group of orthologs #4352. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F6X5P6              	100.00%		H3DDM4              	100.00%
Bootstrap support for F6X5P6 as seed ortholog is 100%.
Bootstrap support for H3DDM4 as seed ortholog is 100%.

Group of orthologs #4353. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

H2XN19              	100.00%		H3CTU4              	100.00%
Bootstrap support for H2XN19 as seed ortholog is 100%.
Bootstrap support for H3CTU4 as seed ortholog is 100%.

Group of orthologs #4354. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F6V7G7              	100.00%		Q4SAR3              	100.00%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for Q4SAR3 as seed ortholog is 100%.

Group of orthologs #4355. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:79

F6Y3J4              	100.00%		H3DKW3              	100.00%
Bootstrap support for F6Y3J4 as seed ortholog is 93%.
Bootstrap support for H3DKW3 as seed ortholog is 99%.

Group of orthologs #4356. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 T.nigroviridis:144

F7BBI5              	100.00%		H3DGC9              	100.00%
Bootstrap support for F7BBI5 as seed ortholog is 87%.
Bootstrap support for H3DGC9 as seed ortholog is 100%.

Group of orthologs #4357. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F7ANQ7              	100.00%		H3DMH6              	100.00%
Bootstrap support for F7ANQ7 as seed ortholog is 100%.
Bootstrap support for H3DMH6 as seed ortholog is 100%.

Group of orthologs #4358. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

F7AP23              	100.00%		Q4RY03              	100.00%
Bootstrap support for F7AP23 as seed ortholog is 100%.
Bootstrap support for Q4RY03 as seed ortholog is 100%.

Group of orthologs #4359. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:144

H2XKA1              	100.00%		Q4SQY6              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for Q4SQY6 as seed ortholog is 100%.

Group of orthologs #4360. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 T.nigroviridis:99

H2XRF7              	100.00%		Q4RWX1              	100.00%
Bootstrap support for H2XRF7 as seed ortholog is 100%.
Bootstrap support for Q4RWX1 as seed ortholog is 99%.

Group of orthologs #4361. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:27

F6RGU6              	100.00%		H3DMH1              	100.00%
F6RGC9              	22.68%		H3BXA4              	17.05%
F6RQN0              	18.95%		H3D510              	11.75%
F6RBY6              	11.48%		
F6VLS5              	5.53%		
Bootstrap support for F6RGU6 as seed ortholog is 81%.
Bootstrap support for H3DMH1 as seed ortholog is 72%.
Alternative seed ortholog is H3DPC6 (27 bits away from this cluster)

Group of orthologs #4362. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:10

F6VM90              	100.00%		Q4REW0              	100.00%
F6V276              	10.16%		H3D570              	62.42%
F6V166              	10.16%		H3CHD6              	16.15%
F6V0K9              	5.35%		H3BVT7              	13.04%
Bootstrap support for F6VM90 as seed ortholog is 92%.
Bootstrap support for Q4REW0 as seed ortholog is 44%.
Alternative seed ortholog is H3DMZ9 (10 bits away from this cluster)

Group of orthologs #4363. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

F6ST26              	100.00%		H3CQX7              	100.00%
                    	       		H3D2J0              	17.91%
                    	       		H3DEA1              	15.87%
                    	       		H3DAF7              	9.30%
Bootstrap support for F6ST26 as seed ortholog is 100%.
Bootstrap support for H3CQX7 as seed ortholog is 100%.

Group of orthologs #4364. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:54

H2XMJ0              	100.00%		H3DN29              	100.00%
                    	       		H3DMP5              	13.87%
                    	       		H3CA24              	6.04%
Bootstrap support for H2XMJ0 as seed ortholog is 100%.
Bootstrap support for H3DN29 as seed ortholog is 94%.

Group of orthologs #4365. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:69

F6QKD8              	100.00%		H3CE50              	100.00%
                    	       		H3C7Z6              	7.42%
Bootstrap support for F6QKD8 as seed ortholog is 76%.
Bootstrap support for H3CE50 as seed ortholog is 99%.

Group of orthologs #4366. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

F6QLN4              	100.00%		H3D6L4              	100.00%
                    	       		H3DGY6              	6.75%
Bootstrap support for F6QLN4 as seed ortholog is 100%.
Bootstrap support for H3D6L4 as seed ortholog is 100%.

Group of orthologs #4367. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:46

F6YRU0              	100.00%		Q4RS84              	100.00%
                    	       		H3DAW0              	34.60%
Bootstrap support for F6YRU0 as seed ortholog is 88%.
Bootstrap support for Q4RS84 as seed ortholog is 96%.

Group of orthologs #4368. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

H2XSR9              	100.00%		H3DJ17              	100.00%
                    	       		H3DHD0              	6.17%
Bootstrap support for H2XSR9 as seed ortholog is 100%.
Bootstrap support for H3DJ17 as seed ortholog is 100%.

Group of orthologs #4369. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

H2XNY4              	100.00%		Q4S464              	100.00%
                    	       		H3DE37              	33.79%
Bootstrap support for H2XNY4 as seed ortholog is 100%.
Bootstrap support for Q4S464 as seed ortholog is 100%.

Group of orthologs #4370. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

F6Q599              	100.00%		H3D805              	100.00%
Bootstrap support for F6Q599 as seed ortholog is 100%.
Bootstrap support for H3D805 as seed ortholog is 100%.

Group of orthologs #4371. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

H2XRC6              	100.00%		H3CB24              	100.00%
Bootstrap support for H2XRC6 as seed ortholog is 100%.
Bootstrap support for H3CB24 as seed ortholog is 100%.

Group of orthologs #4372. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

F6V9P3              	100.00%		H3DM28              	100.00%
Bootstrap support for F6V9P3 as seed ortholog is 100%.
Bootstrap support for H3DM28 as seed ortholog is 100%.

Group of orthologs #4373. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

F6UJ88              	100.00%		Q4SVH3              	100.00%
Bootstrap support for F6UJ88 as seed ortholog is 100%.
Bootstrap support for Q4SVH3 as seed ortholog is 100%.

Group of orthologs #4374. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 T.nigroviridis:143

F6ZFT6              	100.00%		H3DND8              	100.00%
Bootstrap support for F6ZFT6 as seed ortholog is 100%.
Bootstrap support for H3DND8 as seed ortholog is 100%.

Group of orthologs #4375. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:82

F6YYF3              	100.00%		Q4SLE8              	100.00%
F6SY47              	93.48%		H3DCL7              	18.54%
Bootstrap support for F6YYF3 as seed ortholog is 100%.
Bootstrap support for Q4SLE8 as seed ortholog is 99%.

Group of orthologs #4376. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:142

F6U3C1              	100.00%		H3BYT5              	100.00%
Bootstrap support for F6U3C1 as seed ortholog is 99%.
Bootstrap support for H3BYT5 as seed ortholog is 100%.

Group of orthologs #4377. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:142

F6QIH1              	100.00%		H3DIF6              	100.00%
Bootstrap support for F6QIH1 as seed ortholog is 100%.
Bootstrap support for H3DIF6 as seed ortholog is 100%.

Group of orthologs #4378. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:142

F6TEV5              	100.00%		H3DH14              	100.00%
Bootstrap support for F6TEV5 as seed ortholog is 100%.
Bootstrap support for H3DH14 as seed ortholog is 100%.

Group of orthologs #4379. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:43

F6QXL1              	100.00%		H3DP74              	100.00%
Bootstrap support for F6QXL1 as seed ortholog is 100%.
Bootstrap support for H3DP74 as seed ortholog is 85%.

Group of orthologs #4380. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:86

F6QRU4              	100.00%		H3DR08              	100.00%
Bootstrap support for F6QRU4 as seed ortholog is 84%.
Bootstrap support for H3DR08 as seed ortholog is 99%.

Group of orthologs #4381. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:142

H2XTD8              	100.00%		H3CG44              	100.00%
Bootstrap support for H2XTD8 as seed ortholog is 100%.
Bootstrap support for H3CG44 as seed ortholog is 100%.

Group of orthologs #4382. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:6

H2Y145              	100.00%		H3C5W4              	100.00%
Bootstrap support for H2Y145 as seed ortholog is 65%.
Alternative seed ortholog is F6YS37 (12 bits away from this cluster)
Bootstrap support for H3C5W4 as seed ortholog is 57%.
Alternative seed ortholog is H3D1Y2 (6 bits away from this cluster)

Group of orthologs #4383. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 T.nigroviridis:142

H2XLG8              	100.00%		H3D072              	100.00%
Bootstrap support for H2XLG8 as seed ortholog is 100%.
Bootstrap support for H3D072 as seed ortholog is 100%.

Group of orthologs #4384. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:141

F6YF07              	100.00%		H3C444              	100.00%
H2Y2Z2              	100.00%		H3DGC8              	100.00%
                    	       		H3DN70              	100.00%
Bootstrap support for F6YF07 as seed ortholog is 100%.
Bootstrap support for H2Y2Z2 as seed ortholog is 100%.
Bootstrap support for H3C444 as seed ortholog is 100%.
Bootstrap support for H3DGC8 as seed ortholog is 100%.
Bootstrap support for H3DN70 as seed ortholog is 100%.

Group of orthologs #4385. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:62

F7AXY8              	100.00%		H3DCN2              	100.00%
                    	       		H3D4Y1              	16.67%
                    	       		H3CSS7              	12.17%
                    	       		H3C007              	8.43%
Bootstrap support for F7AXY8 as seed ortholog is 99%.
Bootstrap support for H3DCN2 as seed ortholog is 98%.

Group of orthologs #4386. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:28

F6YWJ3              	100.00%		H3D617              	100.00%
                    	       		H3CV24              	21.10%
Bootstrap support for F6YWJ3 as seed ortholog is 100%.
Bootstrap support for H3D617 as seed ortholog is 87%.

Group of orthologs #4387. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:141

F6QZF6              	100.00%		H3CUZ0              	100.00%
Bootstrap support for F6QZF6 as seed ortholog is 100%.
Bootstrap support for H3CUZ0 as seed ortholog is 100%.

Group of orthologs #4388. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:141

F6PYG2              	100.00%		H3DL91              	100.00%
Bootstrap support for F6PYG2 as seed ortholog is 100%.
Bootstrap support for H3DL91 as seed ortholog is 100%.

Group of orthologs #4389. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:141

H2XXH0              	100.00%		H3C191              	100.00%
Bootstrap support for H2XXH0 as seed ortholog is 79%.
Bootstrap support for H3C191 as seed ortholog is 100%.

Group of orthologs #4390. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:141

F6U696              	100.00%		H3DLU7              	100.00%
Bootstrap support for F6U696 as seed ortholog is 90%.
Bootstrap support for H3DLU7 as seed ortholog is 100%.

Group of orthologs #4391. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 T.nigroviridis:141

H2XSW1              	100.00%		Q4RRK9              	100.00%
Bootstrap support for H2XSW1 as seed ortholog is 100%.
Bootstrap support for Q4RRK9 as seed ortholog is 100%.

Group of orthologs #4392. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

F6QUI4              	100.00%		H3D3F7              	100.00%
                    	       		H3D518              	26.73%
Bootstrap support for F6QUI4 as seed ortholog is 100%.
Bootstrap support for H3D3F7 as seed ortholog is 100%.

Group of orthologs #4393. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

F6UPP6              	100.00%		H3CBE7              	100.00%
Bootstrap support for F6UPP6 as seed ortholog is 100%.
Bootstrap support for H3CBE7 as seed ortholog is 100%.

Group of orthologs #4394. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:140

F6V4V8              	100.00%		H3CNA9              	100.00%
Bootstrap support for F6V4V8 as seed ortholog is 98%.
Bootstrap support for H3CNA9 as seed ortholog is 100%.

Group of orthologs #4395. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

F6QKM5              	100.00%		H3D4R4              	100.00%
Bootstrap support for F6QKM5 as seed ortholog is 100%.
Bootstrap support for H3D4R4 as seed ortholog is 100%.

Group of orthologs #4396. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:6

F7B9H1              	100.00%		H3C6Z2              	100.00%
Bootstrap support for F7B9H1 as seed ortholog is 100%.
Bootstrap support for H3C6Z2 as seed ortholog is 62%.
Alternative seed ortholog is H3DDT2 (6 bits away from this cluster)

Group of orthologs #4397. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

F6UFU8              	100.00%		H3CZU9              	100.00%
Bootstrap support for F6UFU8 as seed ortholog is 100%.
Bootstrap support for H3CZU9 as seed ortholog is 100%.

Group of orthologs #4398. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:140

F6ZDE8              	100.00%		H3CRV4              	100.00%
Bootstrap support for F6ZDE8 as seed ortholog is 83%.
Bootstrap support for H3CRV4 as seed ortholog is 100%.

Group of orthologs #4399. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

F6Y504              	100.00%		H3D646              	100.00%
Bootstrap support for F6Y504 as seed ortholog is 100%.
Bootstrap support for H3D646 as seed ortholog is 100%.

Group of orthologs #4400. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

F7ADC2              	100.00%		H3D4E8              	100.00%
Bootstrap support for F7ADC2 as seed ortholog is 100%.
Bootstrap support for H3D4E8 as seed ortholog is 100%.

Group of orthologs #4401. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

H2XZ45              	100.00%		H3D252              	100.00%
Bootstrap support for H2XZ45 as seed ortholog is 100%.
Bootstrap support for H3D252 as seed ortholog is 100%.

Group of orthologs #4402. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 T.nigroviridis:140

H2XJN8              	100.00%		Q4S9T8              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for Q4S9T8 as seed ortholog is 100%.

Group of orthologs #4403. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:31

F6U2P7              	100.00%		H3D5G8              	100.00%
                    	       		H3CVS0              	14.72%
                    	       		H3DI30              	7.46%
Bootstrap support for F6U2P7 as seed ortholog is 100%.
Bootstrap support for H3D5G8 as seed ortholog is 99%.

Group of orthologs #4404. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:139

F6VRL4              	100.00%		H3C536              	100.00%
Bootstrap support for F6VRL4 as seed ortholog is 95%.
Bootstrap support for H3C536 as seed ortholog is 100%.

Group of orthologs #4405. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:139

F6RGQ1              	100.00%		H3CYL0              	100.00%
Bootstrap support for F6RGQ1 as seed ortholog is 100%.
Bootstrap support for H3CYL0 as seed ortholog is 100%.

Group of orthologs #4406. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:139

F6U8D6              	100.00%		H3CSN5              	100.00%
Bootstrap support for F6U8D6 as seed ortholog is 100%.
Bootstrap support for H3CSN5 as seed ortholog is 100%.

Group of orthologs #4407. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:139

H2XRS9              	100.00%		H3CL70              	100.00%
Bootstrap support for H2XRS9 as seed ortholog is 100%.
Bootstrap support for H3CL70 as seed ortholog is 100%.

Group of orthologs #4408. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:139

H2XRE8              	100.00%		H3CZZ0              	100.00%
Bootstrap support for H2XRE8 as seed ortholog is 99%.
Bootstrap support for H3CZZ0 as seed ortholog is 100%.

Group of orthologs #4409. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:139

H2XJV1              	100.00%		H3DIS4              	100.00%
Bootstrap support for H2XJV1 as seed ortholog is 100%.
Bootstrap support for H3DIS4 as seed ortholog is 100%.

Group of orthologs #4410. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 T.nigroviridis:139

H2Y1B1              	100.00%		H3D040              	100.00%
Bootstrap support for H2Y1B1 as seed ortholog is 100%.
Bootstrap support for H3D040 as seed ortholog is 100%.

Group of orthologs #4411. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:51

H2XTC9              	100.00%		H3DIK7              	100.00%
                    	       		H3DGD4              	79.31%
                    	       		H3D308              	43.10%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for H3DIK7 as seed ortholog is 99%.

Group of orthologs #4412. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:30

F6RC45              	100.00%		H3CGG3              	100.00%
                    	       		H3D7X9              	24.70%
Bootstrap support for F6RC45 as seed ortholog is 61%.
Alternative seed ortholog is F7BAS4 (12 bits away from this cluster)
Bootstrap support for H3CGG3 as seed ortholog is 72%.
Alternative seed ortholog is H3DPC6 (30 bits away from this cluster)

Group of orthologs #4413. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:138

F6PJ75              	100.00%		H3DF82              	100.00%
                    	       		H3CFR6              	24.67%
Bootstrap support for F6PJ75 as seed ortholog is 100%.
Bootstrap support for H3DF82 as seed ortholog is 100%.

Group of orthologs #4414. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 T.nigroviridis:138

H2XPZ0              	100.00%		H3D642              	100.00%
                    	       		H3C3L4              	8.21%
Bootstrap support for H2XPZ0 as seed ortholog is 62%.
Alternative seed ortholog is F7B963 (7 bits away from this cluster)
Bootstrap support for H3D642 as seed ortholog is 100%.

Group of orthologs #4415. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:138

F6Q5B7              	100.00%		H3CH81              	100.00%
Bootstrap support for F6Q5B7 as seed ortholog is 100%.
Bootstrap support for H3CH81 as seed ortholog is 100%.

Group of orthologs #4416. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6Y4J7              	100.00%		H3CKS6              	100.00%
Bootstrap support for F6Y4J7 as seed ortholog is 99%.
Bootstrap support for H3CKS6 as seed ortholog is 99%.

Group of orthologs #4417. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:138

F7BKI1              	100.00%		H3CPA5              	100.00%
Bootstrap support for F7BKI1 as seed ortholog is 100%.
Bootstrap support for H3CPA5 as seed ortholog is 100%.

Group of orthologs #4418. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:138

F7B012              	100.00%		H3CSW1              	100.00%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for H3CSW1 as seed ortholog is 100%.

Group of orthologs #4419. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:138

F6PI87              	100.00%		Q4SP97              	100.00%
Bootstrap support for F6PI87 as seed ortholog is 99%.
Bootstrap support for Q4SP97 as seed ortholog is 100%.

Group of orthologs #4420. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:138

F6RRL3              	100.00%		Q4RIG8              	100.00%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for Q4RIG8 as seed ortholog is 100%.

Group of orthologs #4421. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:2

F6VTY2              	100.00%		Q4RYP0              	100.00%
Bootstrap support for F6VTY2 as seed ortholog is 100%.
Bootstrap support for Q4RYP0 as seed ortholog is 43%.
Alternative seed ortholog is H3DIH6 (2 bits away from this cluster)

Group of orthologs #4422. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:138

F6YE24              	100.00%		H3DL59              	100.00%
Bootstrap support for F6YE24 as seed ortholog is 100%.
Bootstrap support for H3DL59 as seed ortholog is 100%.

Group of orthologs #4423. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 T.nigroviridis:138

F7B5G8              	100.00%		H3DHJ6              	100.00%
Bootstrap support for F7B5G8 as seed ortholog is 100%.
Bootstrap support for H3DHJ6 as seed ortholog is 100%.

Group of orthologs #4424. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:137

F6TN36              	100.00%		H3D313              	100.00%
Bootstrap support for F6TN36 as seed ortholog is 100%.
Bootstrap support for H3D313 as seed ortholog is 100%.

Group of orthologs #4425. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:71

F6THA9              	100.00%		H3D3Q2              	100.00%
Bootstrap support for F6THA9 as seed ortholog is 100%.
Bootstrap support for H3D3Q2 as seed ortholog is 99%.

Group of orthologs #4426. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:66

F6SGF2              	100.00%		H3D9N4              	100.00%
Bootstrap support for F6SGF2 as seed ortholog is 73%.
Alternative seed ortholog is H2XZF2 (47 bits away from this cluster)
Bootstrap support for H3D9N4 as seed ortholog is 89%.

Group of orthologs #4427. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:40

F6QXX8              	100.00%		Q4S0S7              	100.00%
Bootstrap support for F6QXX8 as seed ortholog is 100%.
Bootstrap support for Q4S0S7 as seed ortholog is 99%.

Group of orthologs #4428. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:137

F6Y4R6              	100.00%		H3D6N6              	100.00%
Bootstrap support for F6Y4R6 as seed ortholog is 100%.
Bootstrap support for H3D6N6 as seed ortholog is 100%.

Group of orthologs #4429. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:137

F7A0C5              	100.00%		H3D905              	100.00%
Bootstrap support for F7A0C5 as seed ortholog is 100%.
Bootstrap support for H3D905 as seed ortholog is 100%.

Group of orthologs #4430. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 T.nigroviridis:137

H2Y0W5              	100.00%		H3D9K9              	100.00%
Bootstrap support for H2Y0W5 as seed ortholog is 100%.
Bootstrap support for H3D9K9 as seed ortholog is 100%.

Group of orthologs #4431. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:66

O18313              	100.00%		H3C7A5              	100.00%
                    	       		H3C799              	36.01%
                    	       		H3C795              	32.13%
                    	       		H3C792              	27.70%
                    	       		H3C7C1              	18.01%
Bootstrap support for O18313 as seed ortholog is 100%.
Bootstrap support for H3C7A5 as seed ortholog is 98%.

Group of orthologs #4432. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:136

H2XL39              	100.00%		H3CSA9              	100.00%
                    	       		H3D666              	34.01%
                    	       		H3D2K8              	31.29%
Bootstrap support for H2XL39 as seed ortholog is 96%.
Bootstrap support for H3CSA9 as seed ortholog is 100%.

Group of orthologs #4433. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 T.nigroviridis:17

F7BJW8              	100.00%		H3D7Y5              	100.00%
                    	       		Q4SZU0              	26.17%
Bootstrap support for F7BJW8 as seed ortholog is 66%.
Alternative seed ortholog is H2XZF2 (7 bits away from this cluster)
Bootstrap support for H3D7Y5 as seed ortholog is 56%.
Alternative seed ortholog is H3DIJ0 (17 bits away from this cluster)

Group of orthologs #4434. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:38

F6S5F0              	100.00%		H3BWW5              	100.00%
Bootstrap support for F6S5F0 as seed ortholog is 100%.
Bootstrap support for H3BWW5 as seed ortholog is 80%.

Group of orthologs #4435. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

F6VEQ7              	100.00%		H3CJQ8              	100.00%
Bootstrap support for F6VEQ7 as seed ortholog is 100%.
Bootstrap support for H3CJQ8 as seed ortholog is 100%.

Group of orthologs #4436. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

F6RDF3              	100.00%		H3CXK1              	100.00%
Bootstrap support for F6RDF3 as seed ortholog is 100%.
Bootstrap support for H3CXK1 as seed ortholog is 100%.

Group of orthologs #4437. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:67

F6Q2W2              	100.00%		H3DQQ1              	100.00%
Bootstrap support for F6Q2W2 as seed ortholog is 99%.
Bootstrap support for H3DQQ1 as seed ortholog is 99%.

Group of orthologs #4438. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

H2Y1K2              	100.00%		H3BXP5              	100.00%
Bootstrap support for H2Y1K2 as seed ortholog is 100%.
Bootstrap support for H3BXP5 as seed ortholog is 100%.

Group of orthologs #4439. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

F6REV8              	100.00%		Q4RJV4              	100.00%
Bootstrap support for F6REV8 as seed ortholog is 100%.
Bootstrap support for Q4RJV4 as seed ortholog is 100%.

Group of orthologs #4440. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

F6WJJ1              	100.00%		Q4SMQ6              	100.00%
Bootstrap support for F6WJJ1 as seed ortholog is 100%.
Bootstrap support for Q4SMQ6 as seed ortholog is 100%.

Group of orthologs #4441. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:136

F6YLR6              	100.00%		Q4RI32              	100.00%
Bootstrap support for F6YLR6 as seed ortholog is 98%.
Bootstrap support for Q4RI32 as seed ortholog is 100%.

Group of orthologs #4442. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

H2XZ67              	100.00%		H3D288              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for H3D288 as seed ortholog is 100%.

Group of orthologs #4443. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 T.nigroviridis:136

H2XXI7              	100.00%		H3DAQ6              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for H3DAQ6 as seed ortholog is 100%.

Group of orthologs #4444. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:136

H2Y0M9              	100.00%		H3D8Y9              	100.00%
Bootstrap support for H2Y0M9 as seed ortholog is 99%.
Bootstrap support for H3D8Y9 as seed ortholog is 100%.

Group of orthologs #4445. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:71

F6X0B6              	100.00%		H3D2E0              	100.00%
                    	       		H3CVD9              	25.56%
Bootstrap support for F6X0B6 as seed ortholog is 100%.
Bootstrap support for H3D2E0 as seed ortholog is 95%.

Group of orthologs #4446. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:39

F6SU68              	100.00%		H3DHV8              	100.00%
                    	       		H3DIL0              	15.67%
Bootstrap support for F6SU68 as seed ortholog is 92%.
Bootstrap support for H3DHV8 as seed ortholog is 97%.

Group of orthologs #4447. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:63

F7A491              	100.00%		H3DE51              	100.00%
                    	       		H3CUY9              	16.26%
Bootstrap support for F7A491 as seed ortholog is 100%.
Bootstrap support for H3DE51 as seed ortholog is 98%.

Group of orthologs #4448. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:135

F7BE41              	100.00%		Q4RH22              	100.00%
                    	       		H3CT79              	18.43%
Bootstrap support for F7BE41 as seed ortholog is 100%.
Bootstrap support for Q4RH22 as seed ortholog is 100%.

Group of orthologs #4449. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:135

F6S014              	100.00%		H3D5W5              	100.00%
Bootstrap support for F6S014 as seed ortholog is 100%.
Bootstrap support for H3D5W5 as seed ortholog is 100%.

Group of orthologs #4450. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:135

F6ZUZ2              	100.00%		H3D4I2              	100.00%
Bootstrap support for F6ZUZ2 as seed ortholog is 100%.
Bootstrap support for H3D4I2 as seed ortholog is 100%.

Group of orthologs #4451. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:135

H2Y0T0              	100.00%		H3CFT4              	100.00%
Bootstrap support for H2Y0T0 as seed ortholog is 100%.
Bootstrap support for H3CFT4 as seed ortholog is 100%.

Group of orthologs #4452. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:135

H2XR90              	100.00%		H3DL94              	100.00%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for H3DL94 as seed ortholog is 100%.

Group of orthologs #4453. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 T.nigroviridis:135

Q4H376              	100.00%		H3DG65              	100.00%
Bootstrap support for Q4H376 as seed ortholog is 100%.
Bootstrap support for H3DG65 as seed ortholog is 100%.

Group of orthologs #4454. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

H2XW37              	100.00%		H3CWN6              	100.00%
                    	       		H3D2T5              	20.95%
                    	       		H3D0K6              	18.12%
Bootstrap support for H2XW37 as seed ortholog is 100%.
Bootstrap support for H3CWN6 as seed ortholog is 100%.

Group of orthologs #4455. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F6QFA2              	100.00%		H3CB83              	100.00%
Bootstrap support for F6QFA2 as seed ortholog is 100%.
Bootstrap support for H3CB83 as seed ortholog is 100%.

Group of orthologs #4456. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F6UB61              	100.00%		H3C4Q5              	100.00%
Bootstrap support for F6UB61 as seed ortholog is 100%.
Bootstrap support for H3C4Q5 as seed ortholog is 100%.

Group of orthologs #4457. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F6UU76              	100.00%		H3CW85              	100.00%
Bootstrap support for F6UU76 as seed ortholog is 100%.
Bootstrap support for H3CW85 as seed ortholog is 100%.

Group of orthologs #4458. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F6YVB6              	100.00%		H3CM87              	100.00%
Bootstrap support for F6YVB6 as seed ortholog is 100%.
Bootstrap support for H3CM87 as seed ortholog is 100%.

Group of orthologs #4459. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:30

F6U7B2              	100.00%		H3D8A0              	100.00%
Bootstrap support for F6U7B2 as seed ortholog is 100%.
Bootstrap support for H3D8A0 as seed ortholog is 74%.
Alternative seed ortholog is H3CTD0 (30 bits away from this cluster)

Group of orthologs #4460. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F6PYN6              	100.00%		H3DND9              	100.00%
Bootstrap support for F6PYN6 as seed ortholog is 100%.
Bootstrap support for H3DND9 as seed ortholog is 100%.

Group of orthologs #4461. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

H2XYE0              	100.00%		H3C9K6              	100.00%
Bootstrap support for H2XYE0 as seed ortholog is 100%.
Bootstrap support for H3C9K6 as seed ortholog is 100%.

Group of orthologs #4462. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F7BI48              	100.00%		H3D5B6              	100.00%
Bootstrap support for F7BI48 as seed ortholog is 100%.
Bootstrap support for H3D5B6 as seed ortholog is 100%.

Group of orthologs #4463. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 T.nigroviridis:134

F7A9H5              	100.00%		H3DM30              	100.00%
Bootstrap support for F7A9H5 as seed ortholog is 100%.
Bootstrap support for H3DM30 as seed ortholog is 100%.

Group of orthologs #4464. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

H2XKK1              	100.00%		H3BZU8              	100.00%
                    	       		H3D6A5              	14.89%
                    	       		H3DLH4              	12.34%
Bootstrap support for H2XKK1 as seed ortholog is 100%.
Bootstrap support for H3BZU8 as seed ortholog is 100%.

Group of orthologs #4465. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

F7ARW8              	100.00%		H3DHW1              	100.00%
                    	       		H3BZY8              	49.17%
                    	       		H3CJY3              	37.62%
Bootstrap support for F7ARW8 as seed ortholog is 100%.
Bootstrap support for H3DHW1 as seed ortholog is 100%.

Group of orthologs #4466. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:22

H2XLB1              	100.00%		H3CSF7              	100.00%
H2XNW6              	29.28%		
Bootstrap support for H2XLB1 as seed ortholog is 100%.
Bootstrap support for H3CSF7 as seed ortholog is 77%.

Group of orthologs #4467. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:35

F6X383              	100.00%		Q4RMA4              	100.00%
                    	       		H3CEJ6              	16.69%
Bootstrap support for F6X383 as seed ortholog is 79%.
Bootstrap support for Q4RMA4 as seed ortholog is 87%.

Group of orthologs #4468. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:133

F6QMJ9              	100.00%		H3CK17              	100.00%
Bootstrap support for F6QMJ9 as seed ortholog is 84%.
Bootstrap support for H3CK17 as seed ortholog is 100%.

Group of orthologs #4469. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

F6TUT9              	100.00%		H3CB94              	100.00%
Bootstrap support for F6TUT9 as seed ortholog is 100%.
Bootstrap support for H3CB94 as seed ortholog is 100%.

Group of orthologs #4470. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:67

F6Y2V8              	100.00%		H3C515              	100.00%
Bootstrap support for F6Y2V8 as seed ortholog is 99%.
Bootstrap support for H3C515 as seed ortholog is 96%.

Group of orthologs #4471. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:133

F6WS92              	100.00%		H3CAR8              	100.00%
Bootstrap support for F6WS92 as seed ortholog is 98%.
Bootstrap support for H3CAR8 as seed ortholog is 100%.

Group of orthologs #4472. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 T.nigroviridis:42

F6V7C2              	100.00%		H3CQW2              	100.00%
Bootstrap support for F6V7C2 as seed ortholog is 62%.
Alternative seed ortholog is F6Y8A2 (11 bits away from this cluster)
Bootstrap support for H3CQW2 as seed ortholog is 86%.

Group of orthologs #4473. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

H2XNI4              	100.00%		A7E3P1              	100.00%
Bootstrap support for H2XNI4 as seed ortholog is 100%.
Bootstrap support for A7E3P1 as seed ortholog is 100%.

Group of orthologs #4474. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:133

F6YUP9              	100.00%		H3CRF7              	100.00%
Bootstrap support for F6YUP9 as seed ortholog is 94%.
Bootstrap support for H3CRF7 as seed ortholog is 100%.

Group of orthologs #4475. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

H2XUL3              	100.00%		H3BXF8              	100.00%
Bootstrap support for H2XUL3 as seed ortholog is 100%.
Bootstrap support for H3BXF8 as seed ortholog is 100%.

Group of orthologs #4476. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

F6XBT4              	100.00%		H3DQP4              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for H3DQP4 as seed ortholog is 100%.

Group of orthologs #4477. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:133

F6WIH5              	100.00%		Q4S641              	100.00%
Bootstrap support for F6WIH5 as seed ortholog is 100%.
Bootstrap support for Q4S641 as seed ortholog is 100%.

Group of orthologs #4478. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 T.nigroviridis:25

H2XMF4              	100.00%		H3D8G2              	100.00%
Bootstrap support for H2XMF4 as seed ortholog is 100%.
Bootstrap support for H3D8G2 as seed ortholog is 80%.

Group of orthologs #4479. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:52

F6YTT5              	100.00%		Q4S4R9              	100.00%
Bootstrap support for F6YTT5 as seed ortholog is 87%.
Bootstrap support for Q4S4R9 as seed ortholog is 94%.

Group of orthologs #4480. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:18

H2XZI8              	100.00%		H3CCI6              	100.00%
H2XQD2              	20.53%		H3D4H0              	6.80%
H2XVI2              	15.84%		
F7AVL3              	11.14%		
Bootstrap support for H2XZI8 as seed ortholog is 90%.
Bootstrap support for H3CCI6 as seed ortholog is 75%.

Group of orthologs #4481. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

F6XF81              	100.00%		H3C4I4              	100.00%
Bootstrap support for F6XF81 as seed ortholog is 100%.
Bootstrap support for H3C4I4 as seed ortholog is 100%.

Group of orthologs #4482. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

H2XP91              	100.00%		H3CI62              	100.00%
Bootstrap support for H2XP91 as seed ortholog is 100%.
Bootstrap support for H3CI62 as seed ortholog is 100%.

Group of orthologs #4483. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

F6VR85              	100.00%		H3DE63              	100.00%
Bootstrap support for F6VR85 as seed ortholog is 100%.
Bootstrap support for H3DE63 as seed ortholog is 100%.

Group of orthologs #4484. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

H2XPC5              	100.00%		H3CVM6              	100.00%
Bootstrap support for H2XPC5 as seed ortholog is 100%.
Bootstrap support for H3CVM6 as seed ortholog is 100%.

Group of orthologs #4485. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

H2XZL7              	100.00%		H3CK54              	100.00%
Bootstrap support for H2XZL7 as seed ortholog is 100%.
Bootstrap support for H3CK54 as seed ortholog is 100%.

Group of orthologs #4486. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

F6XCN2              	100.00%		Q4T624              	100.00%
Bootstrap support for F6XCN2 as seed ortholog is 100%.
Bootstrap support for Q4T624 as seed ortholog is 100%.

Group of orthologs #4487. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

H2XWR1              	100.00%		H3DHX1              	100.00%
Bootstrap support for H2XWR1 as seed ortholog is 100%.
Bootstrap support for H3DHX1 as seed ortholog is 100%.

Group of orthologs #4488. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 T.nigroviridis:132

H2XQM2              	100.00%		Q4T548              	100.00%
Bootstrap support for H2XQM2 as seed ortholog is 100%.
Bootstrap support for Q4T548 as seed ortholog is 100%.

Group of orthologs #4489. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:2

F6SPG6              	100.00%		H3BVW4              	100.00%
                    	       		H3D1P8              	45.69%
                    	       		H3DGK9              	34.01%
                    	       		H3BXL8              	7.88%
                    	       		H3CNT9              	5.11%
Bootstrap support for F6SPG6 as seed ortholog is 64%.
Alternative seed ortholog is F6YII5 (25 bits away from this cluster)
Bootstrap support for H3BVW4 as seed ortholog is 47%.
Alternative seed ortholog is H3D6J2 (2 bits away from this cluster)

Group of orthologs #4490. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:44

F6WCG9              	100.00%		H3CRB2              	100.00%
                    	       		H3C1Q6              	30.34%
Bootstrap support for F6WCG9 as seed ortholog is 100%.
Bootstrap support for H3CRB2 as seed ortholog is 86%.

Group of orthologs #4491. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:16

F6Y3G3              	100.00%		H3CU72              	100.00%
                    	       		Q4REC0              	41.25%
Bootstrap support for F6Y3G3 as seed ortholog is 99%.
Bootstrap support for H3CU72 as seed ortholog is 73%.
Alternative seed ortholog is H3D9L9 (16 bits away from this cluster)

Group of orthologs #4492. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

F6QH68              	100.00%		H3DL55              	100.00%
                    	       		H3CIP8              	19.40%
Bootstrap support for F6QH68 as seed ortholog is 100%.
Bootstrap support for H3DL55 as seed ortholog is 100%.

Group of orthologs #4493. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

H2XUT9              	100.00%		H3C7U4              	100.00%
                    	       		Q4S2N2              	7.46%
Bootstrap support for H2XUT9 as seed ortholog is 100%.
Bootstrap support for H3C7U4 as seed ortholog is 100%.

Group of orthologs #4494. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:44

F6YJR3              	100.00%		H3BXU2              	100.00%
Bootstrap support for F6YJR3 as seed ortholog is 99%.
Bootstrap support for H3BXU2 as seed ortholog is 95%.

Group of orthologs #4495. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

F6QA01              	100.00%		H3CXQ4              	100.00%
Bootstrap support for F6QA01 as seed ortholog is 100%.
Bootstrap support for H3CXQ4 as seed ortholog is 100%.

Group of orthologs #4496. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

F6S3H3              	100.00%		H3D585              	100.00%
Bootstrap support for F6S3H3 as seed ortholog is 100%.
Bootstrap support for H3D585 as seed ortholog is 100%.

Group of orthologs #4497. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

H2XQ66              	100.00%		H3CTE6              	100.00%
Bootstrap support for H2XQ66 as seed ortholog is 100%.
Bootstrap support for H3CTE6 as seed ortholog is 100%.

Group of orthologs #4498. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:89

H2XP19              	100.00%		H3CY57              	100.00%
Bootstrap support for H2XP19 as seed ortholog is 100%.
Bootstrap support for H3CY57 as seed ortholog is 99%.

Group of orthologs #4499. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

H2XMA8              	100.00%		H3D6D1              	100.00%
Bootstrap support for H2XMA8 as seed ortholog is 100%.
Bootstrap support for H3D6D1 as seed ortholog is 100%.

Group of orthologs #4500. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 T.nigroviridis:131

H2Y1X2              	100.00%		H3DR10              	100.00%
Bootstrap support for H2Y1X2 as seed ortholog is 100%.
Bootstrap support for H3DR10 as seed ortholog is 100%.

Group of orthologs #4501. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:130

F7B946              	100.00%		H3CUM9              	100.00%
                    	       		H3CBN5              	62.97%
                    	       		H3DBT1              	47.26%
                    	       		H3D6H7              	26.80%
Bootstrap support for F7B946 as seed ortholog is 100%.
Bootstrap support for H3CUM9 as seed ortholog is 100%.

Group of orthologs #4502. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:31

F6RRK4              	100.00%		H3CT06              	100.00%
Bootstrap support for F6RRK4 as seed ortholog is 100%.
Bootstrap support for H3CT06 as seed ortholog is 89%.

Group of orthologs #4503. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:130

F6XZJ5              	100.00%		H3CAC0              	100.00%
Bootstrap support for F6XZJ5 as seed ortholog is 100%.
Bootstrap support for H3CAC0 as seed ortholog is 100%.

Group of orthologs #4504. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:130

F7B6D7              	100.00%		H3C672              	100.00%
Bootstrap support for F7B6D7 as seed ortholog is 100%.
Bootstrap support for H3C672 as seed ortholog is 100%.

Group of orthologs #4505. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:130

F6YNB1              	100.00%		H3DK97              	100.00%
Bootstrap support for F6YNB1 as seed ortholog is 100%.
Bootstrap support for H3DK97 as seed ortholog is 100%.

Group of orthologs #4506. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:130

H2XWY8              	100.00%		H3D134              	100.00%
Bootstrap support for H2XWY8 as seed ortholog is 100%.
Bootstrap support for H3D134 as seed ortholog is 100%.

Group of orthologs #4507. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 T.nigroviridis:130

H2XSZ1              	100.00%		H3D8D1              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for H3D8D1 as seed ortholog is 100%.

Group of orthologs #4508. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

F6YMW5              	100.00%		H3BYH3              	100.00%
                    	       		Q4RIS3              	34.07%
Bootstrap support for F6YMW5 as seed ortholog is 100%.
Bootstrap support for H3BYH3 as seed ortholog is 100%.

Group of orthologs #4509. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

H2XJW9              	100.00%		H3CV63              	100.00%
                    	       		H3CTG5              	10.96%
Bootstrap support for H2XJW9 as seed ortholog is 100%.
Bootstrap support for H3CV63 as seed ortholog is 100%.

Group of orthologs #4510. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

H2XRV7              	100.00%		H3CNB7              	100.00%
                    	       		H3CKZ2              	18.11%
Bootstrap support for H2XRV7 as seed ortholog is 100%.
Bootstrap support for H3CNB7 as seed ortholog is 100%.

Group of orthologs #4511. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

H2XRD8              	100.00%		H3DP42              	100.00%
                    	       		H3C365              	9.30%
Bootstrap support for H2XRD8 as seed ortholog is 100%.
Bootstrap support for H3DP42 as seed ortholog is 100%.

Group of orthologs #4512. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

F6RVA1              	100.00%		H3C3X0              	100.00%
Bootstrap support for F6RVA1 as seed ortholog is 100%.
Bootstrap support for H3C3X0 as seed ortholog is 100%.

Group of orthologs #4513. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:66

F6VUI1              	100.00%		H3CMK0              	100.00%
Bootstrap support for F6VUI1 as seed ortholog is 100%.
Bootstrap support for H3CMK0 as seed ortholog is 99%.

Group of orthologs #4514. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

F7A5D0              	100.00%		H3D3R2              	100.00%
Bootstrap support for F7A5D0 as seed ortholog is 100%.
Bootstrap support for H3D3R2 as seed ortholog is 100%.

Group of orthologs #4515. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:73

H2Y0D5              	100.00%		H3CE67              	100.00%
Bootstrap support for H2Y0D5 as seed ortholog is 100%.
Bootstrap support for H3CE67 as seed ortholog is 99%.

Group of orthologs #4516. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

F7ARW3              	100.00%		H3DGY4              	100.00%
Bootstrap support for F7ARW3 as seed ortholog is 100%.
Bootstrap support for H3DGY4 as seed ortholog is 100%.

Group of orthologs #4517. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

H2XYU8              	100.00%		Q4RS21              	100.00%
Bootstrap support for H2XYU8 as seed ortholog is 100%.
Bootstrap support for Q4RS21 as seed ortholog is 100%.

Group of orthologs #4518. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 T.nigroviridis:129

H2XZW2              	100.00%		Q4S6L9              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for Q4S6L9 as seed ortholog is 100%.

Group of orthologs #4519. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:128

F8WQ81              	100.00%		H3CRW9              	100.00%
H2XXT4              	9.90%		
F6ZH80              	6.93%		
Bootstrap support for F8WQ81 as seed ortholog is 92%.
Bootstrap support for H3CRW9 as seed ortholog is 100%.

Group of orthologs #4520. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

H2XRP0              	100.00%		H3DBP2              	100.00%
                    	       		H3C8Q0              	66.67%
Bootstrap support for H2XRP0 as seed ortholog is 100%.
Bootstrap support for H3DBP2 as seed ortholog is 100%.

Group of orthologs #4521. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

H2XY20              	100.00%		Q4SIB6              	100.00%
                    	       		H3CFB0              	48.33%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for Q4SIB6 as seed ortholog is 100%.

Group of orthologs #4522. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 T.nigroviridis:47

F6TIH0              	100.00%		H3BZI2              	100.00%
Bootstrap support for F6TIH0 as seed ortholog is 60%.
Alternative seed ortholog is F6XFF8 (10 bits away from this cluster)
Bootstrap support for H3BZI2 as seed ortholog is 93%.

Group of orthologs #4523. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

F6T052              	100.00%		H3CYD8              	100.00%
Bootstrap support for F6T052 as seed ortholog is 100%.
Bootstrap support for H3CYD8 as seed ortholog is 100%.

Group of orthologs #4524. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

F6SQW7              	100.00%		H3DHA0              	100.00%
Bootstrap support for F6SQW7 as seed ortholog is 100%.
Bootstrap support for H3DHA0 as seed ortholog is 100%.

Group of orthologs #4525. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:39

F6TX28              	100.00%		H3DHD7              	100.00%
Bootstrap support for F6TX28 as seed ortholog is 100%.
Bootstrap support for H3DHD7 as seed ortholog is 99%.

Group of orthologs #4526. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

F6Z0W4              	100.00%		H3D563              	100.00%
Bootstrap support for F6Z0W4 as seed ortholog is 100%.
Bootstrap support for H3D563 as seed ortholog is 100%.

Group of orthologs #4527. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

F6YSJ8              	100.00%		Q4RKZ6              	100.00%
Bootstrap support for F6YSJ8 as seed ortholog is 100%.
Bootstrap support for Q4RKZ6 as seed ortholog is 100%.

Group of orthologs #4528. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:128

H2XT15              	100.00%		H3DJL2              	100.00%
Bootstrap support for H2XT15 as seed ortholog is 100%.
Bootstrap support for H3DJL2 as seed ortholog is 100%.

Group of orthologs #4529. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 T.nigroviridis:82

H2Y2X6              	100.00%		H3DJ43              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for H3DJ43 as seed ortholog is 99%.

Group of orthologs #4530. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 T.nigroviridis:127

F6WVZ0              	100.00%		H3CFT9              	100.00%
                    	       		H3D970              	46.07%
                    	       		H3C297              	19.10%
Bootstrap support for F6WVZ0 as seed ortholog is 100%.
Bootstrap support for H3CFT9 as seed ortholog is 100%.

Group of orthologs #4531. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 T.nigroviridis:127

F6SIM0              	100.00%		H3C7T0              	100.00%
                    	       		H3CNS2              	100.00%
Bootstrap support for F6SIM0 as seed ortholog is 73%.
Alternative seed ortholog is H2Y3N3 (23 bits away from this cluster)
Bootstrap support for H3C7T0 as seed ortholog is 100%.
Bootstrap support for H3CNS2 as seed ortholog is 100%.

Group of orthologs #4532. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 T.nigroviridis:127

F7AG76              	100.00%		H3BX33              	100.00%
Bootstrap support for F7AG76 as seed ortholog is 100%.
Bootstrap support for H3BX33 as seed ortholog is 100%.

Group of orthologs #4533. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 T.nigroviridis:127

F6XFL4              	100.00%		H3CR99              	100.00%
Bootstrap support for F6XFL4 as seed ortholog is 100%.
Bootstrap support for H3CR99 as seed ortholog is 100%.

Group of orthologs #4534. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:127

F6U068              	100.00%		H3DQZ6              	100.00%
Bootstrap support for F6U068 as seed ortholog is 99%.
Bootstrap support for H3DQZ6 as seed ortholog is 100%.

Group of orthologs #4535. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:127

F6W8L4              	100.00%		Q4SEC8              	100.00%
Bootstrap support for F6W8L4 as seed ortholog is 88%.
Bootstrap support for Q4SEC8 as seed ortholog is 100%.

Group of orthologs #4536. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 T.nigroviridis:127

H2XQY4              	100.00%		H3DDC0              	100.00%
Bootstrap support for H2XQY4 as seed ortholog is 100%.
Bootstrap support for H3DDC0 as seed ortholog is 100%.

Group of orthologs #4537. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 T.nigroviridis:127

Q8I7D9              	100.00%		Q4T7M4              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for Q4T7M4 as seed ortholog is 100%.

Group of orthologs #4538. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

Q9NDP3              	100.00%		H3C0W3              	100.00%
                    	       		H3D729              	23.83%
                    	       		H3DL10              	19.86%
                    	       		H3BXC7              	18.05%
                    	       		H3CUA9              	10.47%
Bootstrap support for Q9NDP3 as seed ortholog is 100%.
Bootstrap support for H3C0W3 as seed ortholog is 100%.

Group of orthologs #4539. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

F6RDJ3              	100.00%		H3DGC1              	100.00%
                    	       		H3DLK9              	49.04%
                    	       		H3CB54              	37.02%
                    	       		H3CRD9              	7.93%
Bootstrap support for F6RDJ3 as seed ortholog is 100%.
Bootstrap support for H3DGC1 as seed ortholog is 100%.

Group of orthologs #4540. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

F6W366              	100.00%		H3CGY7              	100.00%
                    	       		H3CW54              	34.49%
Bootstrap support for F6W366 as seed ortholog is 100%.
Bootstrap support for H3CGY7 as seed ortholog is 100%.

Group of orthologs #4541. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

F6U5C3              	100.00%		H3BZT2              	100.00%
Bootstrap support for F6U5C3 as seed ortholog is 100%.
Bootstrap support for H3BZT2 as seed ortholog is 100%.

Group of orthologs #4542. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:35

F6SN53              	100.00%		H3CSD6              	100.00%
Bootstrap support for F6SN53 as seed ortholog is 100%.
Bootstrap support for H3CSD6 as seed ortholog is 88%.

Group of orthologs #4543. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

F6RFU4              	100.00%		H3DHZ9              	100.00%
Bootstrap support for F6RFU4 as seed ortholog is 100%.
Bootstrap support for H3DHZ9 as seed ortholog is 100%.

Group of orthologs #4544. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

H2XLY1              	100.00%		H3CXU5              	100.00%
Bootstrap support for H2XLY1 as seed ortholog is 100%.
Bootstrap support for H3CXU5 as seed ortholog is 100%.

Group of orthologs #4545. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 T.nigroviridis:126

F7ASZ2              	100.00%		H3DJ03              	100.00%
Bootstrap support for F7ASZ2 as seed ortholog is 100%.
Bootstrap support for H3DJ03 as seed ortholog is 100%.

Group of orthologs #4546. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:126

H2XN72              	100.00%		H3DIK6              	100.00%
Bootstrap support for H2XN72 as seed ortholog is 88%.
Bootstrap support for H3DIK6 as seed ortholog is 100%.

Group of orthologs #4547. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 T.nigroviridis:1

F6X863              	100.00%		H3C2F2              	100.00%
Bootstrap support for F6X863 as seed ortholog is 64%.
Alternative seed ortholog is F7AGI1 (9 bits away from this cluster)
Bootstrap support for H3C2F2 as seed ortholog is 52%.
Alternative seed ortholog is H3DQ04 (1 bits away from this cluster)

Group of orthologs #4548. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:75

F6TGC0              	100.00%		H3D1L9              	100.00%
Bootstrap support for F6TGC0 as seed ortholog is 100%.
Bootstrap support for H3D1L9 as seed ortholog is 99%.

Group of orthologs #4549. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:125

F6YF30              	100.00%		H3CLU8              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for H3CLU8 as seed ortholog is 100%.

Group of orthologs #4550. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 T.nigroviridis:125

H2Y058              	100.00%		H3CWT2              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for H3CWT2 as seed ortholog is 100%.

Group of orthologs #4551. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:12

F6ZB81              	100.00%		H3DDN1              	100.00%
F6SHX3              	100.00%		H3BVS0              	100.00%
                    	       		H3CAA3              	41.85%
                    	       		H3CC26              	17.46%
                    	       		H3DN43              	17.13%
                    	       		H3DDD2              	16.31%
                    	       		H3C2C2              	14.66%
                    	       		H3CG14              	14.66%
                    	       		H3BVW6              	7.74%
Bootstrap support for F6ZB81 as seed ortholog is 73%.
Alternative seed ortholog is F6ZC63 (28 bits away from this cluster)
Bootstrap support for F6SHX3 as seed ortholog is 61%.
Alternative seed ortholog is F6ZC63 (28 bits away from this cluster)
Bootstrap support for H3DDN1 as seed ortholog is 61%.
Alternative seed ortholog is H3D5A0 (12 bits away from this cluster)
Bootstrap support for H3BVS0 as seed ortholog is 48%.
Alternative seed ortholog is H3D5A0 (12 bits away from this cluster)

Group of orthologs #4552. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:4

H2Y1H5              	100.00%		H3C087              	100.00%
F7B2N2              	35.00%		H3DHG3              	8.73%
Bootstrap support for H2Y1H5 as seed ortholog is 79%.
Bootstrap support for H3C087 as seed ortholog is 37%.
Alternative seed ortholog is H3CPM1 (4 bits away from this cluster)

Group of orthologs #4553. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:124

F6PZ91              	100.00%		H3C671              	100.00%
                    	       		H3CXX4              	13.24%
Bootstrap support for F6PZ91 as seed ortholog is 100%.
Bootstrap support for H3C671 as seed ortholog is 100%.

Group of orthologs #4554. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:124

F6RB50              	100.00%		H3CBI4              	100.00%
Bootstrap support for F6RB50 as seed ortholog is 100%.
Bootstrap support for H3CBI4 as seed ortholog is 100%.

Group of orthologs #4555. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:68

F6UJ50              	100.00%		H3CMY3              	100.00%
Bootstrap support for F6UJ50 as seed ortholog is 100%.
Bootstrap support for H3CMY3 as seed ortholog is 99%.

Group of orthologs #4556. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:124

F6ZGE9              	100.00%		H3CDC7              	100.00%
Bootstrap support for F6ZGE9 as seed ortholog is 100%.
Bootstrap support for H3CDC7 as seed ortholog is 100%.

Group of orthologs #4557. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:124

H2XJI5              	100.00%		H3C6K6              	100.00%
Bootstrap support for H2XJI5 as seed ortholog is 100%.
Bootstrap support for H3C6K6 as seed ortholog is 100%.

Group of orthologs #4558. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:71

H2Y0G7              	100.00%		H3BZX1              	100.00%
Bootstrap support for H2Y0G7 as seed ortholog is 100%.
Bootstrap support for H3BZX1 as seed ortholog is 99%.

Group of orthologs #4559. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:124

F6RMZ6              	100.00%		H3DRB4              	100.00%
Bootstrap support for F6RMZ6 as seed ortholog is 100%.
Bootstrap support for H3DRB4 as seed ortholog is 100%.

Group of orthologs #4560. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:124

F6WNV4              	100.00%		H3DAW4              	100.00%
Bootstrap support for F6WNV4 as seed ortholog is 100%.
Bootstrap support for H3DAW4 as seed ortholog is 100%.

Group of orthologs #4561. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 T.nigroviridis:81

H2Y1Z7              	100.00%		H3CX02              	100.00%
Bootstrap support for H2Y1Z7 as seed ortholog is 100%.
Bootstrap support for H3CX02 as seed ortholog is 99%.

Group of orthologs #4562. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 T.nigroviridis:123

F6RBS2              	100.00%		H3BVJ3              	100.00%
F7B763              	13.67%		Q4SQ85              	16.43%
F7B757              	9.79%		H3C4F6              	16.20%
H2XS49              	7.97%		
H2XVH5              	6.38%		
H2XNZ2              	6.15%		
Bootstrap support for F6RBS2 as seed ortholog is 85%.
Bootstrap support for H3BVJ3 as seed ortholog is 100%.

Group of orthologs #4563. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 T.nigroviridis:49

H2XPR0              	100.00%		Q4SI10              	100.00%
                    	       		H3C107              	19.47%
                    	       		H3DJT6              	7.71%
Bootstrap support for H2XPR0 as seed ortholog is 68%.
Alternative seed ortholog is F6Q349 (16 bits away from this cluster)
Bootstrap support for Q4SI10 as seed ortholog is 92%.

Group of orthologs #4564. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:34

F6U6Y7              	100.00%		H3CSL7              	100.00%
                    	       		H3CHU6              	32.25%
Bootstrap support for F6U6Y7 as seed ortholog is 100%.
Bootstrap support for H3CSL7 as seed ortholog is 77%.

Group of orthologs #4565. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:123

F6TIK7              	100.00%		H3DET0              	100.00%
Bootstrap support for F6TIK7 as seed ortholog is 100%.
Bootstrap support for H3DET0 as seed ortholog is 100%.

Group of orthologs #4566. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:123

H2Y2U8              	100.00%		H3BVY4              	100.00%
Bootstrap support for H2Y2U8 as seed ortholog is 100%.
Bootstrap support for H3BVY4 as seed ortholog is 100%.

Group of orthologs #4567. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:123

F6QSC7              	100.00%		Q4T4P1              	100.00%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for Q4T4P1 as seed ortholog is 100%.

Group of orthologs #4568. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:123

H2XKV9              	100.00%		H3D735              	100.00%
Bootstrap support for H2XKV9 as seed ortholog is 100%.
Bootstrap support for H3D735 as seed ortholog is 100%.

Group of orthologs #4569. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:123

H2XY09              	100.00%		Q4S4D6              	100.00%
Bootstrap support for H2XY09 as seed ortholog is 100%.
Bootstrap support for Q4S4D6 as seed ortholog is 100%.

Group of orthologs #4570. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 T.nigroviridis:123

Q8HIN8              	100.00%		Q4JQI2              	100.00%
Bootstrap support for Q8HIN8 as seed ortholog is 100%.
Bootstrap support for Q4JQI2 as seed ortholog is 100%.

Group of orthologs #4571. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:48

H2XK34              	100.00%		H3CT42              	100.00%
                    	       		H3D435              	69.68%
                    	       		H3DR19              	37.10%
                    	       		H3CQP0              	25.94%
                    	       		H3CMV6              	12.97%
Bootstrap support for H2XK34 as seed ortholog is 100%.
Bootstrap support for H3CT42 as seed ortholog is 88%.

Group of orthologs #4572. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:122

Q4H3J9              	100.00%		H3BX65              	100.00%
                    	       		H3DHE1              	15.80%
                    	       		H3CQL8              	15.13%
                    	       		H3DG10              	13.45%
                    	       		H3DJ50              	5.55%
Bootstrap support for Q4H3J9 as seed ortholog is 100%.
Bootstrap support for H3BX65 as seed ortholog is 100%.

Group of orthologs #4573. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:122

F6W881              	100.00%		H3BYA5              	100.00%
                    	       		H3C882              	24.24%
                    	       		Q4TGH1              	23.81%
                    	       		H3CG33              	9.09%
Bootstrap support for F6W881 as seed ortholog is 100%.
Bootstrap support for H3BYA5 as seed ortholog is 100%.

Group of orthologs #4574. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:1

H2XM82              	100.00%		H3C825              	100.00%
Bootstrap support for H2XM82 as seed ortholog is 84%.
Bootstrap support for H3C825 as seed ortholog is 19%.
Alternative seed ortholog is H3DCT3 (1 bits away from this cluster)

Group of orthologs #4575. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:122

H2Y217              	100.00%		H3C0V4              	100.00%
Bootstrap support for H2Y217 as seed ortholog is 100%.
Bootstrap support for H3C0V4 as seed ortholog is 100%.

Group of orthologs #4576. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:122

F6S2G5              	100.00%		Q4RQE0              	100.00%
Bootstrap support for F6S2G5 as seed ortholog is 100%.
Bootstrap support for Q4RQE0 as seed ortholog is 100%.

Group of orthologs #4577. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:60

F7B236              	100.00%		H3D1Q0              	100.00%
Bootstrap support for F7B236 as seed ortholog is 98%.
Bootstrap support for H3D1Q0 as seed ortholog is 99%.

Group of orthologs #4578. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:122

H2Y076              	100.00%		H3CKN8              	100.00%
Bootstrap support for H2Y076 as seed ortholog is 100%.
Bootstrap support for H3CKN8 as seed ortholog is 100%.

Group of orthologs #4579. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 T.nigroviridis:122

F6Z589              	100.00%		H3DMX7              	100.00%
Bootstrap support for F6Z589 as seed ortholog is 100%.
Bootstrap support for H3DMX7 as seed ortholog is 100%.

Group of orthologs #4580. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:40

F6VJ60              	100.00%		H3CWB4              	100.00%
                    	       		H3BZ96              	20.98%
Bootstrap support for F6VJ60 as seed ortholog is 100%.
Bootstrap support for H3CWB4 as seed ortholog is 92%.

Group of orthologs #4581. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

H2XX77              	100.00%		H3D0Q2              	100.00%
                    	       		H3D5X7              	100.00%
Bootstrap support for H2XX77 as seed ortholog is 100%.
Bootstrap support for H3D0Q2 as seed ortholog is 100%.
Bootstrap support for H3D5X7 as seed ortholog is 100%.

Group of orthologs #4582. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F6PHI9              	100.00%		H3BXG6              	100.00%
Bootstrap support for F6PHI9 as seed ortholog is 100%.
Bootstrap support for H3BXG6 as seed ortholog is 100%.

Group of orthologs #4583. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F6VB34              	100.00%		H3C5J1              	100.00%
Bootstrap support for F6VB34 as seed ortholog is 100%.
Bootstrap support for H3C5J1 as seed ortholog is 100%.

Group of orthologs #4584. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F6UG66              	100.00%		H3CR46              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for H3CR46 as seed ortholog is 100%.

Group of orthologs #4585. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F7ARN8              	100.00%		H3C5K3              	100.00%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for H3C5K3 as seed ortholog is 100%.

Group of orthologs #4586. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F6ZED0              	100.00%		H3CV74              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for H3CV74 as seed ortholog is 100%.

Group of orthologs #4587. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

H2XXY6              	100.00%		H3C029              	100.00%
Bootstrap support for H2XXY6 as seed ortholog is 100%.
Bootstrap support for H3C029 as seed ortholog is 100%.

Group of orthologs #4588. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F6TBA1              	100.00%		H3DKF3              	100.00%
Bootstrap support for F6TBA1 as seed ortholog is 100%.
Bootstrap support for H3DKF3 as seed ortholog is 100%.

Group of orthologs #4589. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:121

H2XV92              	100.00%		H3CBH1              	100.00%
Bootstrap support for H2XV92 as seed ortholog is 87%.
Bootstrap support for H3CBH1 as seed ortholog is 100%.

Group of orthologs #4590. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

F6UTS4              	100.00%		Q4RTZ0              	100.00%
Bootstrap support for F6UTS4 as seed ortholog is 100%.
Bootstrap support for Q4RTZ0 as seed ortholog is 100%.

Group of orthologs #4591. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

H2XVT6              	100.00%		H3D4I8              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for H3D4I8 as seed ortholog is 100%.

Group of orthologs #4592. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

H2XU70              	100.00%		H3DF98              	100.00%
Bootstrap support for H2XU70 as seed ortholog is 100%.
Bootstrap support for H3DF98 as seed ortholog is 100%.

Group of orthologs #4593. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 T.nigroviridis:121

H2XNY2              	100.00%		Q4RLT3              	100.00%
Bootstrap support for H2XNY2 as seed ortholog is 100%.
Bootstrap support for Q4RLT3 as seed ortholog is 100%.

Group of orthologs #4594. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

Q4H3W1              	100.00%		H3C3R7              	100.00%
                    	       		H3DM53              	15.63%
                    	       		H3DAQ4              	14.83%
                    	       		H3DCB9              	12.76%
                    	       		H3DHT0              	12.41%
Bootstrap support for Q4H3W1 as seed ortholog is 100%.
Bootstrap support for H3C3R7 as seed ortholog is 100%.

Group of orthologs #4595. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

F6V542              	100.00%		H3D6V0              	100.00%
                    	       		H3DIR8              	29.83%
Bootstrap support for F6V542 as seed ortholog is 100%.
Bootstrap support for H3D6V0 as seed ortholog is 100%.

Group of orthologs #4596. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:50

H2XVK4              	100.00%		H3CU10              	100.00%
                    	       		H3DEB8              	10.24%
Bootstrap support for H2XVK4 as seed ortholog is 98%.
Bootstrap support for H3CU10 as seed ortholog is 88%.

Group of orthologs #4597. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

H2XTN5              	100.00%		H3CZL1              	100.00%
                    	       		H3D698              	19.07%
Bootstrap support for H2XTN5 as seed ortholog is 100%.
Bootstrap support for H3CZL1 as seed ortholog is 100%.

Group of orthologs #4598. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

F6YPQ4              	100.00%		H3BY86              	100.00%
Bootstrap support for F6YPQ4 as seed ortholog is 100%.
Bootstrap support for H3BY86 as seed ortholog is 100%.

Group of orthologs #4599. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

H2XSI9              	100.00%		H3C9Q0              	100.00%
Bootstrap support for H2XSI9 as seed ortholog is 100%.
Bootstrap support for H3C9Q0 as seed ortholog is 100%.

Group of orthologs #4600. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

H2Y2F7              	100.00%		H3CDT7              	100.00%
Bootstrap support for H2Y2F7 as seed ortholog is 100%.
Bootstrap support for H3CDT7 as seed ortholog is 100%.

Group of orthologs #4601. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 T.nigroviridis:120

H2Y1V2              	100.00%		H3CPX8              	100.00%
Bootstrap support for H2Y1V2 as seed ortholog is 100%.
Bootstrap support for H3CPX8 as seed ortholog is 100%.

Group of orthologs #4602. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 T.nigroviridis:119

F6VV38              	100.00%		H3CKA9              	100.00%
F6WU35              	7.34%		
H2XM92              	6.73%		
Bootstrap support for F6VV38 as seed ortholog is 84%.
Bootstrap support for H3CKA9 as seed ortholog is 100%.

Group of orthologs #4603. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:51

F7BDW7              	100.00%		H3DHR3              	100.00%
                    	       		H3DK67              	37.69%
                    	       		H3D0R5              	31.16%
Bootstrap support for F7BDW7 as seed ortholog is 99%.
Bootstrap support for H3DHR3 as seed ortholog is 99%.

Group of orthologs #4604. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:119

F6Y3H6              	100.00%		H3CYG1              	100.00%
                    	       		H3D619              	23.99%
Bootstrap support for F6Y3H6 as seed ortholog is 96%.
Bootstrap support for H3CYG1 as seed ortholog is 100%.

Group of orthologs #4605. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:119

F7BK53              	100.00%		H3CQ97              	100.00%
                    	       		Q4SQ06              	100.00%
Bootstrap support for F7BK53 as seed ortholog is 100%.
Bootstrap support for H3CQ97 as seed ortholog is 100%.
Bootstrap support for Q4SQ06 as seed ortholog is 100%.

Group of orthologs #4606. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:31

F6QMN2              	100.00%		H3BZ65              	100.00%
Bootstrap support for F6QMN2 as seed ortholog is 100%.
Bootstrap support for H3BZ65 as seed ortholog is 84%.

Group of orthologs #4607. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:119

F6VL68              	100.00%		H3BZV5              	100.00%
Bootstrap support for F6VL68 as seed ortholog is 100%.
Bootstrap support for H3BZV5 as seed ortholog is 100%.

Group of orthologs #4608. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:119

F6XC11              	100.00%		H3CNR6              	100.00%
Bootstrap support for F6XC11 as seed ortholog is 100%.
Bootstrap support for H3CNR6 as seed ortholog is 100%.

Group of orthologs #4609. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:119

F6XYG2              	100.00%		H3CUR4              	100.00%
Bootstrap support for F6XYG2 as seed ortholog is 100%.
Bootstrap support for H3CUR4 as seed ortholog is 100%.

Group of orthologs #4610. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:18

F6WH63              	100.00%		H3D2H1              	100.00%
Bootstrap support for F6WH63 as seed ortholog is 100%.
Bootstrap support for H3D2H1 as seed ortholog is 68%.
Alternative seed ortholog is H3CFX4 (18 bits away from this cluster)

Group of orthologs #4611. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:119

H2XYK0              	100.00%		H3C285              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for H3C285 as seed ortholog is 100%.

Group of orthologs #4612. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:53

F7AGA2              	100.00%		H3CVK6              	100.00%
Bootstrap support for F7AGA2 as seed ortholog is 100%.
Bootstrap support for H3CVK6 as seed ortholog is 99%.

Group of orthologs #4613. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:74

H2XTZ3              	100.00%		H3CID7              	100.00%
Bootstrap support for H2XTZ3 as seed ortholog is 100%.
Bootstrap support for H3CID7 as seed ortholog is 99%.

Group of orthologs #4614. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 T.nigroviridis:119

F7BGS1              	100.00%		H3DMU8              	100.00%
Bootstrap support for F7BGS1 as seed ortholog is 97%.
Bootstrap support for H3DMU8 as seed ortholog is 100%.

Group of orthologs #4615. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 T.nigroviridis:68

H2XVB4              	100.00%		H3DDF2              	100.00%
Bootstrap support for H2XVB4 as seed ortholog is 100%.
Bootstrap support for H3DDF2 as seed ortholog is 99%.

Group of orthologs #4616. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:119

H2XX36              	100.00%		H3DCF8              	100.00%
Bootstrap support for H2XX36 as seed ortholog is 80%.
Bootstrap support for H3DCF8 as seed ortholog is 100%.

Group of orthologs #4617. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 T.nigroviridis:24

F6PSB3              	100.00%		H3CGG8              	100.00%
F6PQC6              	10.95%		Q4RS07              	17.11%
F6WVA9              	7.78%		H3DFB1              	16.38%
                    	       		Q4RS10              	16.38%
                    	       		H3BZY4              	15.89%
                    	       		H3DNU7              	15.89%
                    	       		H3C036              	15.65%
                    	       		H3CLG3              	15.16%
                    	       		Q4RS13              	14.91%
                    	       		H3DNU8              	14.67%
                    	       		H3DNU3              	14.18%
                    	       		Q4RSQ5              	13.94%
                    	       		H3BZW2              	13.20%
                    	       		H3DFA8              	12.96%
                    	       		H3CJH0              	9.78%
                    	       		Q4TC50              	9.78%
                    	       		H3DBS0              	8.31%
                    	       		H3DNW1              	7.09%
                    	       		Q4RFR5              	6.11%
                    	       		H3DNW2              	5.38%
                    	       		H3DNU2              	5.38%
Bootstrap support for F6PSB3 as seed ortholog is 64%.
Alternative seed ortholog is F6YW52 (11 bits away from this cluster)
Bootstrap support for H3CGG8 as seed ortholog is 92%.

Group of orthologs #4618. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 T.nigroviridis:5

H2XVY8              	100.00%		H3D0A7              	100.00%
H2XKP9              	33.09%		Q4T5R8              	30.67%
                    	       		H3C617              	17.10%
Bootstrap support for H2XVY8 as seed ortholog is 78%.
Bootstrap support for H3D0A7 as seed ortholog is 56%.
Alternative seed ortholog is H3C3A2 (5 bits away from this cluster)

Group of orthologs #4619. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 T.nigroviridis:118

F6W5B3              	100.00%		H3CCJ8              	100.00%
                    	       		H3C4A0              	59.29%
Bootstrap support for F6W5B3 as seed ortholog is 77%.
Bootstrap support for H3CCJ8 as seed ortholog is 100%.

Group of orthologs #4620. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

F6U981              	100.00%		H3C9X4              	100.00%
Bootstrap support for F6U981 as seed ortholog is 100%.
Bootstrap support for H3C9X4 as seed ortholog is 100%.

Group of orthologs #4621. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 T.nigroviridis:53

F6Y790              	100.00%		H3CN83              	100.00%
Bootstrap support for F6Y790 as seed ortholog is 56%.
Alternative seed ortholog is H2XRK5 (16 bits away from this cluster)
Bootstrap support for H3CN83 as seed ortholog is 97%.

Group of orthologs #4622. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

H2XTL6              	100.00%		H3CAD3              	100.00%
Bootstrap support for H2XTL6 as seed ortholog is 100%.
Bootstrap support for H3CAD3 as seed ortholog is 100%.

Group of orthologs #4623. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

F6X4K3              	100.00%		H3D7K2              	100.00%
Bootstrap support for F6X4K3 as seed ortholog is 100%.
Bootstrap support for H3D7K2 as seed ortholog is 100%.

Group of orthologs #4624. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

H2Y0A6              	100.00%		H3CRQ2              	100.00%
Bootstrap support for H2Y0A6 as seed ortholog is 100%.
Bootstrap support for H3CRQ2 as seed ortholog is 100%.

Group of orthologs #4625. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

H2XJJ6              	100.00%		H3DM01              	100.00%
Bootstrap support for H2XJJ6 as seed ortholog is 100%.
Bootstrap support for H3DM01 as seed ortholog is 100%.

Group of orthologs #4626. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

F7AD14              	100.00%		Q4T1D2              	100.00%
Bootstrap support for F7AD14 as seed ortholog is 100%.
Bootstrap support for Q4T1D2 as seed ortholog is 100%.

Group of orthologs #4627. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 T.nigroviridis:118

H2Y1B5              	100.00%		H3DAD0              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for H3DAD0 as seed ortholog is 100%.

Group of orthologs #4628. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:117

H2XRT0              	100.00%		H3CCD7              	100.00%
                    	       		H3CCT9              	100.00%
Bootstrap support for H2XRT0 as seed ortholog is 99%.
Bootstrap support for H3CCD7 as seed ortholog is 100%.
Bootstrap support for H3CCT9 as seed ortholog is 100%.

Group of orthologs #4629. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:4

F6YH85              	100.00%		H3D0V3              	100.00%
                    	       		H3CZY7              	40.41%
Bootstrap support for F6YH85 as seed ortholog is 100%.
Bootstrap support for H3D0V3 as seed ortholog is 50%.
Alternative seed ortholog is H3C4U4 (4 bits away from this cluster)

Group of orthologs #4630. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 T.nigroviridis:48

H2XRR2              	100.00%		H3CSH9              	100.00%
                    	       		H3DJN8              	100.00%
Bootstrap support for H2XRR2 as seed ortholog is 72%.
Alternative seed ortholog is H2XKA5 (21 bits away from this cluster)
Bootstrap support for H3CSH9 as seed ortholog is 88%.
Bootstrap support for H3DJN8 as seed ortholog is 88%.

Group of orthologs #4631. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:117

H2XPR4              	100.00%		H3CCT8              	100.00%
Bootstrap support for H2XPR4 as seed ortholog is 100%.
Bootstrap support for H3CCT8 as seed ortholog is 100%.

Group of orthologs #4632. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:61

H2XVJ6              	100.00%		H3CGN3              	100.00%
Bootstrap support for H2XVJ6 as seed ortholog is 98%.
Bootstrap support for H3CGN3 as seed ortholog is 94%.

Group of orthologs #4633. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:117

F6W5A6              	100.00%		H3DM97              	100.00%
Bootstrap support for F6W5A6 as seed ortholog is 100%.
Bootstrap support for H3DM97 as seed ortholog is 100%.

Group of orthologs #4634. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 T.nigroviridis:117

F6ZGB7              	100.00%		Q4RLD5              	100.00%
Bootstrap support for F6ZGB7 as seed ortholog is 100%.
Bootstrap support for Q4RLD5 as seed ortholog is 100%.

Group of orthologs #4635. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:19

F6QEK5              	100.00%		H3CSD9              	100.00%
                    	       		H3CC21              	15.79%
                    	       		H3D9G8              	7.78%
Bootstrap support for F6QEK5 as seed ortholog is 78%.
Bootstrap support for H3CSD9 as seed ortholog is 93%.

Group of orthologs #4636. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:63

H2XTI0              	100.00%		H3CKD1              	100.00%
H2XUP7              	22.77%		
F6V269              	18.22%		
Bootstrap support for H2XTI0 as seed ortholog is 100%.
Bootstrap support for H3CKD1 as seed ortholog is 97%.

Group of orthologs #4637. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

F6YWD0              	100.00%		H3CQE3              	100.00%
                    	       		Q4SPU8              	95.20%
Bootstrap support for F6YWD0 as seed ortholog is 100%.
Bootstrap support for H3CQE3 as seed ortholog is 100%.

Group of orthologs #4638. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

F6VM15              	100.00%		H3DDL5              	100.00%
                    	       		H3CAJ1              	15.00%
Bootstrap support for F6VM15 as seed ortholog is 100%.
Bootstrap support for H3DDL5 as seed ortholog is 100%.

Group of orthologs #4639. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

F6URQ1              	100.00%		H3CFH5              	100.00%
Bootstrap support for F6URQ1 as seed ortholog is 100%.
Bootstrap support for H3CFH5 as seed ortholog is 100%.

Group of orthologs #4640. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

F6YWH4              	100.00%		H3BZF3              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for H3BZF3 as seed ortholog is 100%.

Group of orthologs #4641. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

F6XU26              	100.00%		H3CUJ1              	100.00%
Bootstrap support for F6XU26 as seed ortholog is 100%.
Bootstrap support for H3CUJ1 as seed ortholog is 100%.

Group of orthologs #4642. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

F6ZER2              	100.00%		H3CU99              	100.00%
Bootstrap support for F6ZER2 as seed ortholog is 100%.
Bootstrap support for H3CU99 as seed ortholog is 100%.

Group of orthologs #4643. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 T.nigroviridis:116

H2XRU3              	100.00%		Q4RIL0              	100.00%
Bootstrap support for H2XRU3 as seed ortholog is 100%.
Bootstrap support for Q4RIL0 as seed ortholog is 100%.

Group of orthologs #4644. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:115

F7A2L3              	100.00%		H3CEX9              	100.00%
                    	       		H3C1H1              	25.78%
Bootstrap support for F7A2L3 as seed ortholog is 83%.
Bootstrap support for H3CEX9 as seed ortholog is 100%.

Group of orthologs #4645. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:115

F6TKD8              	100.00%		H3DJ42              	100.00%
H2XMP3              	18.37%		
Bootstrap support for F6TKD8 as seed ortholog is 100%.
Bootstrap support for H3DJ42 as seed ortholog is 100%.

Group of orthologs #4646. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:115

F6PM15              	100.00%		H3C5B0              	100.00%
Bootstrap support for F6PM15 as seed ortholog is 100%.
Bootstrap support for H3C5B0 as seed ortholog is 100%.

Group of orthologs #4647. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:115

F6SVR6              	100.00%		H3CX30              	100.00%
Bootstrap support for F6SVR6 as seed ortholog is 100%.
Bootstrap support for H3CX30 as seed ortholog is 100%.

Group of orthologs #4648. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:115

F6ZB59              	100.00%		H3CDQ6              	100.00%
Bootstrap support for F6ZB59 as seed ortholog is 100%.
Bootstrap support for H3CDQ6 as seed ortholog is 100%.

Group of orthologs #4649. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 T.nigroviridis:43

F6WNP9              	100.00%		H3DNS7              	100.00%
Bootstrap support for F6WNP9 as seed ortholog is 100%.
Bootstrap support for H3DNS7 as seed ortholog is 94%.

Group of orthologs #4650. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F6UW73              	100.00%		H3CU68              	100.00%
                    	       		H3C9C1              	12.37%
                    	       		H3DG79              	8.36%
Bootstrap support for F6UW73 as seed ortholog is 100%.
Bootstrap support for H3CU68 as seed ortholog is 100%.

Group of orthologs #4651. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 T.nigroviridis:27

F7AT24              	100.00%		H3D193              	100.00%
                    	       		H3DIB7              	33.08%
                    	       		H3DHY9              	31.15%
Bootstrap support for F7AT24 as seed ortholog is 98%.
Bootstrap support for H3D193 as seed ortholog is 91%.

Group of orthologs #4652. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:24

F6RJ81              	100.00%		H3CT38              	100.00%
                    	       		H3CQR3              	20.01%
Bootstrap support for F6RJ81 as seed ortholog is 100%.
Bootstrap support for H3CT38 as seed ortholog is 57%.
Alternative seed ortholog is H3CGU0 (24 bits away from this cluster)

Group of orthologs #4653. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:114

Q4H3L8              	100.00%		H3CVM4              	100.00%
                    	       		H3C1G0              	6.58%
Bootstrap support for Q4H3L8 as seed ortholog is 98%.
Bootstrap support for H3CVM4 as seed ortholog is 100%.

Group of orthologs #4654. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

H2Y318              	100.00%		H3D036              	100.00%
                    	       		H3DK89              	10.98%
Bootstrap support for H2Y318 as seed ortholog is 100%.
Bootstrap support for H3D036 as seed ortholog is 100%.

Group of orthologs #4655. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:55

F6W0T2              	100.00%		A0JGZ9              	100.00%
Bootstrap support for F6W0T2 as seed ortholog is 100%.
Bootstrap support for A0JGZ9 as seed ortholog is 98%.

Group of orthologs #4656. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F6WVC9              	100.00%		H3C6I2              	100.00%
Bootstrap support for F6WVC9 as seed ortholog is 100%.
Bootstrap support for H3C6I2 as seed ortholog is 100%.

Group of orthologs #4657. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F6Y7L6              	100.00%		H3CD22              	100.00%
Bootstrap support for F6Y7L6 as seed ortholog is 100%.
Bootstrap support for H3CD22 as seed ortholog is 100%.

Group of orthologs #4658. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F7AYQ0              	100.00%		H3C0F4              	100.00%
Bootstrap support for F7AYQ0 as seed ortholog is 100%.
Bootstrap support for H3C0F4 as seed ortholog is 100%.

Group of orthologs #4659. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F6XR53              	100.00%		H3CFQ0              	100.00%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for H3CFQ0 as seed ortholog is 100%.

Group of orthologs #4660. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F7AVQ6              	100.00%		H3C8E7              	100.00%
Bootstrap support for F7AVQ6 as seed ortholog is 100%.
Bootstrap support for H3C8E7 as seed ortholog is 100%.

Group of orthologs #4661. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F7BNZ7              	100.00%		H3C6Q0              	100.00%
Bootstrap support for F7BNZ7 as seed ortholog is 100%.
Bootstrap support for H3C6Q0 as seed ortholog is 100%.

Group of orthologs #4662. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F6VLR0              	100.00%		H3D006              	100.00%
Bootstrap support for F6VLR0 as seed ortholog is 100%.
Bootstrap support for H3D006 as seed ortholog is 100%.

Group of orthologs #4663. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

H2XT20              	100.00%		H3CFQ2              	100.00%
Bootstrap support for H2XT20 as seed ortholog is 100%.
Bootstrap support for H3CFQ2 as seed ortholog is 100%.

Group of orthologs #4664. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

F6XU45              	100.00%		Q4SHG3              	100.00%
Bootstrap support for F6XU45 as seed ortholog is 100%.
Bootstrap support for Q4SHG3 as seed ortholog is 100%.

Group of orthologs #4665. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:114

H2XYG4              	100.00%		Q4RY26              	100.00%
Bootstrap support for H2XYG4 as seed ortholog is 100%.
Bootstrap support for Q4RY26 as seed ortholog is 100%.

Group of orthologs #4666. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 T.nigroviridis:60

H2XZI3              	100.00%		Q4RUP3              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for Q4RUP3 as seed ortholog is 99%.

Group of orthologs #4667. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:37

H2Y1N7              	100.00%		Q4S3D0              	100.00%
Bootstrap support for H2Y1N7 as seed ortholog is 99%.
Bootstrap support for Q4S3D0 as seed ortholog is 93%.

Group of orthologs #4668. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 T.nigroviridis:27

F6TZY2              	100.00%		H3CS32              	100.00%
F6TZQ2              	86.97%		H3DN25              	16.79%
                    	       		H3D468              	16.42%
                    	       		H3CN99              	13.43%
                    	       		H3C710              	13.06%
                    	       		H3CNA0              	11.19%
                    	       		H3CNA3              	11.19%
Bootstrap support for F6TZY2 as seed ortholog is 80%.
Bootstrap support for H3CS32 as seed ortholog is 90%.

Group of orthologs #4669. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

H2XJK8              	100.00%		H3CQG3              	100.00%
                    	       		Q4SZJ1              	28.80%
Bootstrap support for H2XJK8 as seed ortholog is 100%.
Bootstrap support for H3CQG3 as seed ortholog is 100%.

Group of orthologs #4670. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F6RS06              	100.00%		H3CB11              	100.00%
Bootstrap support for F6RS06 as seed ortholog is 100%.
Bootstrap support for H3CB11 as seed ortholog is 100%.

Group of orthologs #4671. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F6TCG6              	100.00%		H3CNW0              	100.00%
Bootstrap support for F6TCG6 as seed ortholog is 100%.
Bootstrap support for H3CNW0 as seed ortholog is 100%.

Group of orthologs #4672. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F6ZEU6              	100.00%		H3CKS1              	100.00%
Bootstrap support for F6ZEU6 as seed ortholog is 100%.
Bootstrap support for H3CKS1 as seed ortholog is 100%.

Group of orthologs #4673. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

H2XT55              	100.00%		H3BW86              	100.00%
Bootstrap support for H2XT55 as seed ortholog is 100%.
Bootstrap support for H3BW86 as seed ortholog is 100%.

Group of orthologs #4674. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F7BPC9              	100.00%		H3CIS1              	100.00%
Bootstrap support for F7BPC9 as seed ortholog is 100%.
Bootstrap support for H3CIS1 as seed ortholog is 100%.

Group of orthologs #4675. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:9

F6R9B7              	100.00%		H3DQS6              	100.00%
Bootstrap support for F6R9B7 as seed ortholog is 100%.
Bootstrap support for H3DQS6 as seed ortholog is 59%.
Alternative seed ortholog is H3DL53 (9 bits away from this cluster)

Group of orthologs #4676. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F6YRL7              	100.00%		H3DEH5              	100.00%
Bootstrap support for F6YRL7 as seed ortholog is 100%.
Bootstrap support for H3DEH5 as seed ortholog is 100%.

Group of orthologs #4677. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F6Z2L4              	100.00%		H3DKA7              	100.00%
Bootstrap support for F6Z2L4 as seed ortholog is 100%.
Bootstrap support for H3DKA7 as seed ortholog is 100%.

Group of orthologs #4678. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

F6YMZ5              	100.00%		Q4SBM8              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for Q4SBM8 as seed ortholog is 100%.

Group of orthologs #4679. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

H2XZD8              	100.00%		H3D7D1              	100.00%
Bootstrap support for H2XZD8 as seed ortholog is 100%.
Bootstrap support for H3D7D1 as seed ortholog is 100%.

Group of orthologs #4680. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 T.nigroviridis:113

H2XWJ8              	100.00%		Q4S9I3              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for Q4S9I3 as seed ortholog is 100%.

Group of orthologs #4681. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:112

F6W382              	100.00%		H3CS53              	100.00%
                    	       		H3CWP8              	27.10%
                    	       		H3CRN5              	22.95%
Bootstrap support for F6W382 as seed ortholog is 100%.
Bootstrap support for H3CS53 as seed ortholog is 100%.

Group of orthologs #4682. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:112

F6TVI5              	100.00%		H3D4H8              	100.00%
                    	       		H3CMY9              	35.74%
Bootstrap support for F6TVI5 as seed ortholog is 100%.
Bootstrap support for H3D4H8 as seed ortholog is 100%.

Group of orthologs #4683. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:112

F6QG58              	100.00%		H3CJ25              	100.00%
Bootstrap support for F6QG58 as seed ortholog is 100%.
Bootstrap support for H3CJ25 as seed ortholog is 100%.

Group of orthologs #4684. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:112

F6QK29              	100.00%		H3D7S2              	100.00%
Bootstrap support for F6QK29 as seed ortholog is 100%.
Bootstrap support for H3D7S2 as seed ortholog is 100%.

Group of orthologs #4685. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 T.nigroviridis:112

H2XZ89              	100.00%		H3BXI6              	100.00%
Bootstrap support for H2XZ89 as seed ortholog is 89%.
Bootstrap support for H3BXI6 as seed ortholog is 100%.

Group of orthologs #4686. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:112

F7BLF3              	100.00%		H3CPN9              	100.00%
Bootstrap support for F7BLF3 as seed ortholog is 100%.
Bootstrap support for H3CPN9 as seed ortholog is 100%.

Group of orthologs #4687. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 T.nigroviridis:112

H2XN89              	100.00%		Q4SDW1              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for Q4SDW1 as seed ortholog is 100%.

Group of orthologs #4688. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:62

F6VCG0              	100.00%		Q4SWF2              	100.00%
                    	       		H3D0G6              	27.08%
Bootstrap support for F6VCG0 as seed ortholog is 100%.
Bootstrap support for Q4SWF2 as seed ortholog is 99%.

Group of orthologs #4689. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:111

F6QFG5              	100.00%		H3C2T5              	100.00%
Bootstrap support for F6QFG5 as seed ortholog is 100%.
Bootstrap support for H3C2T5 as seed ortholog is 100%.

Group of orthologs #4690. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:111

F7BME9              	100.00%		H3CD34              	100.00%
Bootstrap support for F7BME9 as seed ortholog is 100%.
Bootstrap support for H3CD34 as seed ortholog is 100%.

Group of orthologs #4691. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:42

H2XYJ8              	100.00%		H3CHF4              	100.00%
Bootstrap support for H2XYJ8 as seed ortholog is 99%.
Bootstrap support for H3CHF4 as seed ortholog is 99%.

Group of orthologs #4692. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:111

F6U437              	100.00%		Q4SRJ0              	100.00%
Bootstrap support for F6U437 as seed ortholog is 100%.
Bootstrap support for Q4SRJ0 as seed ortholog is 100%.

Group of orthologs #4693. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:26

F6YA88              	100.00%		H3DPI5              	100.00%
Bootstrap support for F6YA88 as seed ortholog is 81%.
Bootstrap support for H3DPI5 as seed ortholog is 82%.

Group of orthologs #4694. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:9

H2XKN7              	100.00%		H3DEC7              	100.00%
Bootstrap support for H2XKN7 as seed ortholog is 100%.
Bootstrap support for H3DEC7 as seed ortholog is 56%.
Alternative seed ortholog is H3D6T0 (9 bits away from this cluster)

Group of orthologs #4695. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 T.nigroviridis:111

F6ZWQ3              	100.00%		Q4SB95              	100.00%
Bootstrap support for F6ZWQ3 as seed ortholog is 100%.
Bootstrap support for Q4SB95 as seed ortholog is 100%.

Group of orthologs #4696. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:30

F6W239              	100.00%		Q4RDL7              	100.00%
                    	       		H3BWP7              	7.59%
                    	       		H3D0T9              	5.61%
Bootstrap support for F6W239 as seed ortholog is 100%.
Bootstrap support for Q4RDL7 as seed ortholog is 88%.

Group of orthologs #4697. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:110

F6TBF1              	100.00%		H3DMU0              	100.00%
Bootstrap support for F6TBF1 as seed ortholog is 100%.
Bootstrap support for H3DMU0 as seed ortholog is 100%.

Group of orthologs #4698. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 T.nigroviridis:110

H2XRJ8              	100.00%		H3CQA5              	100.00%
Bootstrap support for H2XRJ8 as seed ortholog is 100%.
Bootstrap support for H3CQA5 as seed ortholog is 100%.

Group of orthologs #4699. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6RKC9              	100.00%		H3BZ76              	100.00%
F6VF47              	40.98%		
F6WD67              	12.20%		
Bootstrap support for F6RKC9 as seed ortholog is 100%.
Bootstrap support for H3BZ76 as seed ortholog is 100%.

Group of orthologs #4700. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 T.nigroviridis:35

F6RRN2              	100.00%		Q4RPQ6              	100.00%
                    	       		H3CTS6              	5.99%
Bootstrap support for F6RRN2 as seed ortholog is 87%.
Bootstrap support for Q4RPQ6 as seed ortholog is 94%.

Group of orthologs #4701. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 T.nigroviridis:5

F6YAS9              	100.00%		H3D8X6              	100.00%
                    	       		H3DC15              	23.11%
Bootstrap support for F6YAS9 as seed ortholog is 48%.
Alternative seed ortholog is H2XZF2 (1 bits away from this cluster)
Bootstrap support for H3D8X6 as seed ortholog is 45%.
Alternative seed ortholog is H3C4K9 (5 bits away from this cluster)

Group of orthologs #4702. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F7A675              	100.00%		H3DF68              	100.00%
                    	       		H3CTQ0              	19.19%
Bootstrap support for F7A675 as seed ortholog is 100%.
Bootstrap support for H3DF68 as seed ortholog is 100%.

Group of orthologs #4703. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6ZKY0              	100.00%		H3DJX3              	100.00%
                    	       		H3CU85              	13.42%
Bootstrap support for F6ZKY0 as seed ortholog is 100%.
Bootstrap support for H3DJX3 as seed ortholog is 100%.

Group of orthologs #4704. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6U5V8              	100.00%		H3C0B8              	100.00%
Bootstrap support for F6U5V8 as seed ortholog is 100%.
Bootstrap support for H3C0B8 as seed ortholog is 100%.

Group of orthologs #4705. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6RLI7              	100.00%		H3CR11              	100.00%
Bootstrap support for F6RLI7 as seed ortholog is 100%.
Bootstrap support for H3CR11 as seed ortholog is 100%.

Group of orthologs #4706. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6YGA9              	100.00%		H3CBB9              	100.00%
Bootstrap support for F6YGA9 as seed ortholog is 100%.
Bootstrap support for H3CBB9 as seed ortholog is 100%.

Group of orthologs #4707. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6T4M6              	100.00%		H3CYD6              	100.00%
Bootstrap support for F6T4M6 as seed ortholog is 100%.
Bootstrap support for H3CYD6 as seed ortholog is 100%.

Group of orthologs #4708. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6RW32              	100.00%		H3D4G5              	100.00%
Bootstrap support for F6RW32 as seed ortholog is 100%.
Bootstrap support for H3D4G5 as seed ortholog is 100%.

Group of orthologs #4709. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 T.nigroviridis:37

F6XV61              	100.00%		H3D8A3              	100.00%
Bootstrap support for F6XV61 as seed ortholog is 60%.
Alternative seed ortholog is F6Q349 (7 bits away from this cluster)
Bootstrap support for H3D8A3 as seed ortholog is 88%.

Group of orthologs #4710. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6ZM16              	100.00%		H3D714              	100.00%
Bootstrap support for F6ZM16 as seed ortholog is 100%.
Bootstrap support for H3D714 as seed ortholog is 100%.

Group of orthologs #4711. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:13

H2XRA5              	100.00%		H3CR96              	100.00%
Bootstrap support for H2XRA5 as seed ortholog is 100%.
Bootstrap support for H3CR96 as seed ortholog is 63%.
Alternative seed ortholog is H3C3A2 (13 bits away from this cluster)

Group of orthologs #4712. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

F6YM72              	100.00%		H3DMX4              	100.00%
Bootstrap support for F6YM72 as seed ortholog is 100%.
Bootstrap support for H3DMX4 as seed ortholog is 100%.

Group of orthologs #4713. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 T.nigroviridis:109

H2XXH3              	100.00%		H3DJ56              	100.00%
Bootstrap support for H2XXH3 as seed ortholog is 100%.
Bootstrap support for H3DJ56 as seed ortholog is 100%.

Group of orthologs #4714. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:108

F7AMU0              	100.00%		H3DED9              	100.00%
F6V014              	25.93%		
F6QY06              	8.89%		
Bootstrap support for F7AMU0 as seed ortholog is 65%.
Alternative seed ortholog is F6PTL1 (12 bits away from this cluster)
Bootstrap support for H3DED9 as seed ortholog is 100%.

Group of orthologs #4715. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

H2XM94              	100.00%		Q4T0E2              	100.00%
                    	       		H3D732              	7.65%
                    	       		H3D9U6              	7.35%
Bootstrap support for H2XM94 as seed ortholog is 100%.
Bootstrap support for Q4T0E2 as seed ortholog is 100%.

Group of orthologs #4716. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 T.nigroviridis:25

F6YLP6              	100.00%		H3C7A9              	100.00%
                    	       		H3C790              	46.96%
Bootstrap support for F6YLP6 as seed ortholog is 79%.
Bootstrap support for H3C7A9 as seed ortholog is 87%.

Group of orthologs #4717. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

H2Y008              	100.00%		H3CI08              	100.00%
                    	       		Q4T0L6              	69.03%
Bootstrap support for H2Y008 as seed ortholog is 100%.
Bootstrap support for H3CI08 as seed ortholog is 100%.

Group of orthologs #4718. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

H2Y315              	100.00%		H3DMD1              	100.00%
                    	       		H3CPH8              	10.28%
Bootstrap support for H2Y315 as seed ortholog is 100%.
Bootstrap support for H3DMD1 as seed ortholog is 100%.

Group of orthologs #4719. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

F6SSH7              	100.00%		H3CUP6              	100.00%
Bootstrap support for F6SSH7 as seed ortholog is 100%.
Bootstrap support for H3CUP6 as seed ortholog is 100%.

Group of orthologs #4720. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

F6Y3M3              	100.00%		H3CQL4              	100.00%
Bootstrap support for F6Y3M3 as seed ortholog is 100%.
Bootstrap support for H3CQL4 as seed ortholog is 100%.

Group of orthologs #4721. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

H2XM22              	100.00%		H3CWJ4              	100.00%
Bootstrap support for H2XM22 as seed ortholog is 100%.
Bootstrap support for H3CWJ4 as seed ortholog is 100%.

Group of orthologs #4722. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

F6WKB8              	100.00%		H3DPV9              	100.00%
Bootstrap support for F6WKB8 as seed ortholog is 100%.
Bootstrap support for H3DPV9 as seed ortholog is 100%.

Group of orthologs #4723. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

H2XWV5              	100.00%		H3CVD8              	100.00%
Bootstrap support for H2XWV5 as seed ortholog is 100%.
Bootstrap support for H3CVD8 as seed ortholog is 100%.

Group of orthologs #4724. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 T.nigroviridis:31

H2XT36              	100.00%		H3D465              	100.00%
Bootstrap support for H2XT36 as seed ortholog is 81%.
Bootstrap support for H3D465 as seed ortholog is 94%.

Group of orthologs #4725. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:108

H2Y1C3              	100.00%		H3CTZ6              	100.00%
Bootstrap support for H2Y1C3 as seed ortholog is 100%.
Bootstrap support for H3CTZ6 as seed ortholog is 100%.

Group of orthologs #4726. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 T.nigroviridis:26

H2XWK0              	100.00%		Q4RR82              	100.00%
Bootstrap support for H2XWK0 as seed ortholog is 100%.
Bootstrap support for Q4RR82 as seed ortholog is 95%.

Group of orthologs #4727. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:107

F6WP45              	100.00%		H3CPG7              	100.00%
F6XA49              	79.06%		H3BWD1              	22.17%
                    	       		H3CBD3              	9.50%
Bootstrap support for F6WP45 as seed ortholog is 100%.
Bootstrap support for H3CPG7 as seed ortholog is 100%.

Group of orthologs #4728. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:107

H2XRL3              	100.00%		H3DL17              	100.00%
                    	       		Q4RPT9              	20.19%
                    	       		H3CWY5              	13.94%
Bootstrap support for H2XRL3 as seed ortholog is 100%.
Bootstrap support for H3DL17 as seed ortholog is 100%.

Group of orthologs #4729. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:107

H2Y2N8              	100.00%		H3C283              	100.00%
                    	       		H3D8X5              	22.59%
Bootstrap support for H2Y2N8 as seed ortholog is 100%.
Bootstrap support for H3C283 as seed ortholog is 100%.

Group of orthologs #4730. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:107

H2XYR3              	100.00%		H3CLC6              	100.00%
Bootstrap support for H2XYR3 as seed ortholog is 100%.
Bootstrap support for H3CLC6 as seed ortholog is 100%.

Group of orthologs #4731. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 T.nigroviridis:107

H2XU50              	100.00%		H3CUR7              	100.00%
Bootstrap support for H2XU50 as seed ortholog is 100%.
Bootstrap support for H3CUR7 as seed ortholog is 100%.

Group of orthologs #4732. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:107

H2Y3A1              	100.00%		H3DK72              	100.00%
Bootstrap support for H2Y3A1 as seed ortholog is 97%.
Bootstrap support for H3DK72 as seed ortholog is 100%.

Group of orthologs #4733. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

F6PZ36              	100.00%		Q4RFD2              	100.00%
                    	       		H3D3W4              	45.72%
Bootstrap support for F6PZ36 as seed ortholog is 100%.
Bootstrap support for Q4RFD2 as seed ortholog is 100%.

Group of orthologs #4734. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

H2Y143              	100.00%		H3DBN4              	100.00%
                    	       		H3DQ50              	15.26%
Bootstrap support for H2Y143 as seed ortholog is 100%.
Bootstrap support for H3DBN4 as seed ortholog is 100%.

Group of orthologs #4735. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

H2XUZ6              	100.00%		Q4RJ93              	100.00%
                    	       		Q4S4A1              	44.65%
Bootstrap support for H2XUZ6 as seed ortholog is 100%.
Bootstrap support for Q4RJ93 as seed ortholog is 100%.

Group of orthologs #4736. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

F6UP59              	100.00%		H3CD86              	100.00%
Bootstrap support for F6UP59 as seed ortholog is 100%.
Bootstrap support for H3CD86 as seed ortholog is 100%.

Group of orthologs #4737. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

F6QHL8              	100.00%		H3CUC4              	100.00%
Bootstrap support for F6QHL8 as seed ortholog is 100%.
Bootstrap support for H3CUC4 as seed ortholog is 100%.

Group of orthologs #4738. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:64

F6YC04              	100.00%		H3C6L1              	100.00%
Bootstrap support for F6YC04 as seed ortholog is 100%.
Bootstrap support for H3C6L1 as seed ortholog is 96%.

Group of orthologs #4739. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 T.nigroviridis:25

F7A7U9              	100.00%		H3CQX2              	100.00%
Bootstrap support for F7A7U9 as seed ortholog is 61%.
Alternative seed ortholog is F6YS37 (10 bits away from this cluster)
Bootstrap support for H3CQX2 as seed ortholog is 70%.
Alternative seed ortholog is Q4RQ15 (25 bits away from this cluster)

Group of orthologs #4740. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

F7ALL0              	100.00%		H3CRY7              	100.00%
Bootstrap support for F7ALL0 as seed ortholog is 100%.
Bootstrap support for H3CRY7 as seed ortholog is 100%.

Group of orthologs #4741. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

F6YXQ0              	100.00%		H3D8L7              	100.00%
Bootstrap support for F6YXQ0 as seed ortholog is 100%.
Bootstrap support for H3D8L7 as seed ortholog is 100%.

Group of orthologs #4742. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:106

F6U5S2              	100.00%		Q4RQ98              	100.00%
Bootstrap support for F6U5S2 as seed ortholog is 87%.
Bootstrap support for Q4RQ98 as seed ortholog is 100%.

Group of orthologs #4743. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

F7A4V3              	100.00%		H3DA35              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for H3DA35 as seed ortholog is 100%.

Group of orthologs #4744. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 T.nigroviridis:106

F7AXC6              	100.00%		H3DBK0              	100.00%
Bootstrap support for F7AXC6 as seed ortholog is 90%.
Bootstrap support for H3DBK0 as seed ortholog is 100%.

Group of orthologs #4745. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 T.nigroviridis:106

Q4H3N8              	100.00%		H3CN50              	100.00%
Bootstrap support for Q4H3N8 as seed ortholog is 100%.
Bootstrap support for H3CN50 as seed ortholog is 100%.

Group of orthologs #4746. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:36

H2XK25              	100.00%		H3DGM3              	100.00%
Bootstrap support for H2XK25 as seed ortholog is 94%.
Bootstrap support for H3DGM3 as seed ortholog is 95%.

Group of orthologs #4747. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

F6SKP5              	100.00%		H3CAW0              	100.00%
Bootstrap support for F6SKP5 as seed ortholog is 100%.
Bootstrap support for H3CAW0 as seed ortholog is 100%.

Group of orthologs #4748. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

F6SK60              	100.00%		H3CE28              	100.00%
Bootstrap support for F6SK60 as seed ortholog is 100%.
Bootstrap support for H3CE28 as seed ortholog is 100%.

Group of orthologs #4749. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

F6R4A6              	100.00%		H3DCI8              	100.00%
Bootstrap support for F6R4A6 as seed ortholog is 100%.
Bootstrap support for H3DCI8 as seed ortholog is 100%.

Group of orthologs #4750. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:55

H2XS09              	100.00%		H3C3Q6              	100.00%
Bootstrap support for H2XS09 as seed ortholog is 100%.
Bootstrap support for H3C3Q6 as seed ortholog is 99%.

Group of orthologs #4751. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

H2Y1M8              	100.00%		H3BWW8              	100.00%
Bootstrap support for H2Y1M8 as seed ortholog is 100%.
Bootstrap support for H3BWW8 as seed ortholog is 100%.

Group of orthologs #4752. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

F7A435              	100.00%		H3D4S5              	100.00%
Bootstrap support for F7A435 as seed ortholog is 100%.
Bootstrap support for H3D4S5 as seed ortholog is 100%.

Group of orthologs #4753. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

F6XYK4              	100.00%		Q4RA58              	100.00%
Bootstrap support for F6XYK4 as seed ortholog is 100%.
Bootstrap support for Q4RA58 as seed ortholog is 100%.

Group of orthologs #4754. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

H2XXY8              	100.00%		H3DEC5              	100.00%
Bootstrap support for H2XXY8 as seed ortholog is 100%.
Bootstrap support for H3DEC5 as seed ortholog is 100%.

Group of orthologs #4755. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

H2XTS0              	100.00%		Q4RUH4              	100.00%
Bootstrap support for H2XTS0 as seed ortholog is 100%.
Bootstrap support for Q4RUH4 as seed ortholog is 100%.

Group of orthologs #4756. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 T.nigroviridis:105

H2Y3D9              	100.00%		H3DJA1              	100.00%
Bootstrap support for H2Y3D9 as seed ortholog is 100%.
Bootstrap support for H3DJA1 as seed ortholog is 100%.

Group of orthologs #4757. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:59

F6WIL0              	100.00%		H3CGN2              	100.00%
F6ZAF3              	9.39%		H3CGN1              	16.49%
F6QD58              	8.00%		
Bootstrap support for F6WIL0 as seed ortholog is 100%.
Bootstrap support for H3CGN2 as seed ortholog is 95%.

Group of orthologs #4758. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

F6RAE8              	100.00%		H3D1H7              	100.00%
                    	       		H3DCC3              	45.03%
                    	       		H3D898              	33.27%
Bootstrap support for F6RAE8 as seed ortholog is 100%.
Bootstrap support for H3D1H7 as seed ortholog is 100%.

Group of orthologs #4759. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

H2XLF0              	100.00%		H3BVM4              	100.00%
F6XTC5              	17.06%		
Bootstrap support for H2XLF0 as seed ortholog is 100%.
Bootstrap support for H3BVM4 as seed ortholog is 100%.

Group of orthologs #4760. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

F6U8R6              	100.00%		H3C1R6              	100.00%
Bootstrap support for F6U8R6 as seed ortholog is 100%.
Bootstrap support for H3C1R6 as seed ortholog is 100%.

Group of orthologs #4761. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

F6QGK7              	100.00%		H3D571              	100.00%
Bootstrap support for F6QGK7 as seed ortholog is 100%.
Bootstrap support for H3D571 as seed ortholog is 100%.

Group of orthologs #4762. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

F6PWR0              	100.00%		Q4SY73              	100.00%
Bootstrap support for F6PWR0 as seed ortholog is 100%.
Bootstrap support for Q4SY73 as seed ortholog is 100%.

Group of orthologs #4763. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

H2XML9              	100.00%		H3CPX1              	100.00%
Bootstrap support for H2XML9 as seed ortholog is 100%.
Bootstrap support for H3CPX1 as seed ortholog is 100%.

Group of orthologs #4764. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

F7ANT6              	100.00%		H3D2Z5              	100.00%
Bootstrap support for F7ANT6 as seed ortholog is 100%.
Bootstrap support for H3D2Z5 as seed ortholog is 100%.

Group of orthologs #4765. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:2

F7ANP5              	100.00%		Q4SVX5              	100.00%
Bootstrap support for F7ANP5 as seed ortholog is 57%.
Alternative seed ortholog is F7AJV7 (8 bits away from this cluster)
Bootstrap support for Q4SVX5 as seed ortholog is 52%.
Alternative seed ortholog is H3CE23 (2 bits away from this cluster)

Group of orthologs #4766. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:30

H2XRM8              	100.00%		Q4RP59              	100.00%
Bootstrap support for H2XRM8 as seed ortholog is 88%.
Bootstrap support for Q4RP59 as seed ortholog is 88%.

Group of orthologs #4767. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 T.nigroviridis:104

Q8T885              	100.00%		H3DFD4              	100.00%
Bootstrap support for Q8T885 as seed ortholog is 100%.
Bootstrap support for H3DFD4 as seed ortholog is 100%.

Group of orthologs #4768. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

F6YAZ4              	100.00%		H3CSV0              	100.00%
                    	       		Q4SKJ4              	100.00%
                    	       		Q4SKJ9              	99.28%
                    	       		Q4SU62              	95.65%
                    	       		H3CDR5              	94.93%
                    	       		Q4SL95              	83.33%
                    	       		H3C993              	76.09%
                    	       		H3CMB1              	42.59%
                    	       		Q4SJC2              	15.94%
                    	       		H3BZM3              	15.22%
                    	       		H3C8R6              	15.22%
                    	       		H3C003              	13.77%
                    	       		H3C6B7              	13.77%
                    	       		H3C4Z7              	13.04%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for H3CSV0 as seed ortholog is 100%.
Bootstrap support for Q4SKJ4 as seed ortholog is 100%.

Group of orthologs #4769. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:26

F6XG40              	100.00%		H3C7Y9              	100.00%
F6SJU9              	100.00%		H3DMI4              	100.00%
                    	       		H3C5Q8              	67.88%
Bootstrap support for F6XG40 as seed ortholog is 100%.
Bootstrap support for F6SJU9 as seed ortholog is 100%.
Bootstrap support for H3C7Y9 as seed ortholog is 84%.
Bootstrap support for H3DMI4 as seed ortholog is 73%.
Alternative seed ortholog is H3CZT9 (26 bits away from this cluster)

Group of orthologs #4770. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

Q4H3R0              	100.00%		H3DI09              	100.00%
                    	       		H3DJ93              	31.84%
Bootstrap support for Q4H3R0 as seed ortholog is 100%.
Bootstrap support for H3DI09 as seed ortholog is 100%.

Group of orthologs #4771. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

F6SSA8              	100.00%		H3CML8              	100.00%
Bootstrap support for F6SSA8 as seed ortholog is 100%.
Bootstrap support for H3CML8 as seed ortholog is 100%.

Group of orthologs #4772. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

H2XL09              	100.00%		H3CDR0              	100.00%
Bootstrap support for H2XL09 as seed ortholog is 100%.
Bootstrap support for H3CDR0 as seed ortholog is 100%.

Group of orthologs #4773. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

F6XUE2              	100.00%		H3D616              	100.00%
Bootstrap support for F6XUE2 as seed ortholog is 100%.
Bootstrap support for H3D616 as seed ortholog is 100%.

Group of orthologs #4774. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

F6V377              	100.00%		H3DIV9              	100.00%
Bootstrap support for F6V377 as seed ortholog is 100%.
Bootstrap support for H3DIV9 as seed ortholog is 100%.

Group of orthologs #4775. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

F6SP08              	100.00%		Q4T5J6              	100.00%
Bootstrap support for F6SP08 as seed ortholog is 100%.
Bootstrap support for Q4T5J6 as seed ortholog is 100%.

Group of orthologs #4776. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 T.nigroviridis:103

H2XKN9              	100.00%		H3DCW1              	100.00%
Bootstrap support for H2XKN9 as seed ortholog is 66%.
Alternative seed ortholog is F7A786 (10 bits away from this cluster)
Bootstrap support for H3DCW1 as seed ortholog is 100%.

Group of orthologs #4777. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 T.nigroviridis:103

H2Y340              	100.00%		Q4RVD1              	100.00%
Bootstrap support for H2Y340 as seed ortholog is 100%.
Bootstrap support for Q4RVD1 as seed ortholog is 100%.

Group of orthologs #4778. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:48

F6SZH9              	100.00%		H3CC48              	100.00%
                    	       		H3CIL8              	100.00%
                    	       		H3D8S4              	28.38%
                    	       		H3D8W9              	14.19%
                    	       		H3D667              	5.90%
Bootstrap support for F6SZH9 as seed ortholog is 79%.
Bootstrap support for H3CC48 as seed ortholog is 92%.
Bootstrap support for H3CIL8 as seed ortholog is 93%.

Group of orthologs #4779. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:52

F6UGG0              	100.00%		H3CP03              	100.00%
                    	       		H3BXV8              	16.45%
Bootstrap support for F6UGG0 as seed ortholog is 100%.
Bootstrap support for H3CP03 as seed ortholog is 95%.

Group of orthologs #4780. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

F7B0J2              	100.00%		H3D7L7              	100.00%
                    	       		H3BVW1              	6.76%
Bootstrap support for F7B0J2 as seed ortholog is 100%.
Bootstrap support for H3D7L7 as seed ortholog is 100%.

Group of orthologs #4781. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:102

H2XQA8              	100.00%		H3DHN0              	100.00%
                    	       		H3C369              	17.53%
Bootstrap support for H2XQA8 as seed ortholog is 74%.
Alternative seed ortholog is F6U895 (25 bits away from this cluster)
Bootstrap support for H3DHN0 as seed ortholog is 100%.

Group of orthologs #4782. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

F6VD64              	100.00%		H3CC95              	100.00%
Bootstrap support for F6VD64 as seed ortholog is 100%.
Bootstrap support for H3CC95 as seed ortholog is 100%.

Group of orthologs #4783. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

F6SGK9              	100.00%		H3D573              	100.00%
Bootstrap support for F6SGK9 as seed ortholog is 100%.
Bootstrap support for H3D573 as seed ortholog is 100%.

Group of orthologs #4784. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

F6V341              	100.00%		H3D2Y6              	100.00%
Bootstrap support for F6V341 as seed ortholog is 100%.
Bootstrap support for H3D2Y6 as seed ortholog is 100%.

Group of orthologs #4785. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

F6YB51              	100.00%		H3DEK2              	100.00%
Bootstrap support for F6YB51 as seed ortholog is 100%.
Bootstrap support for H3DEK2 as seed ortholog is 100%.

Group of orthologs #4786. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

H2XYU7              	100.00%		H3CM67              	100.00%
Bootstrap support for H2XYU7 as seed ortholog is 100%.
Bootstrap support for H3CM67 as seed ortholog is 100%.

Group of orthologs #4787. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:102

F6ZGM2              	100.00%		Q4SF90              	100.00%
Bootstrap support for F6ZGM2 as seed ortholog is 100%.
Bootstrap support for Q4SF90 as seed ortholog is 100%.

Group of orthologs #4788. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 T.nigroviridis:12

H2XVD4              	100.00%		H3DMK9              	100.00%
Bootstrap support for H2XVD4 as seed ortholog is 100%.
Bootstrap support for H3DMK9 as seed ortholog is 65%.
Alternative seed ortholog is H3D994 (12 bits away from this cluster)

Group of orthologs #4789. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:12

F7AG40              	100.00%		H3C347              	100.00%
                    	       		H3CDF8              	69.77%
                    	       		H3CHB6              	57.56%
                    	       		H3CRW3              	51.13%
                    	       		H3D4I7              	44.37%
Bootstrap support for F7AG40 as seed ortholog is 100%.
Bootstrap support for H3C347 as seed ortholog is 66%.
Alternative seed ortholog is H3CP44 (12 bits away from this cluster)

Group of orthologs #4790. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

F6PIT9              	100.00%		H3BYW3              	100.00%
                    	       		H3CJ30              	28.72%
                    	       		H3DL89              	9.65%
Bootstrap support for F6PIT9 as seed ortholog is 100%.
Bootstrap support for H3BYW3 as seed ortholog is 100%.

Group of orthologs #4791. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 T.nigroviridis:32

F7BFW8              	100.00%		Q4TD40              	100.00%
                    	       		Q4RL26              	5.66%
Bootstrap support for F7BFW8 as seed ortholog is 99%.
Bootstrap support for Q4TD40 as seed ortholog is 98%.

Group of orthologs #4792. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

H2XSG2              	100.00%		H3DP49              	100.00%
                    	       		H3CNL5              	55.95%
Bootstrap support for H2XSG2 as seed ortholog is 100%.
Bootstrap support for H3DP49 as seed ortholog is 100%.

Group of orthologs #4793. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

F6UAC6              	100.00%		H3CWG1              	100.00%
Bootstrap support for F6UAC6 as seed ortholog is 100%.
Bootstrap support for H3CWG1 as seed ortholog is 100%.

Group of orthologs #4794. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:28

F6ZX31              	100.00%		H3D397              	100.00%
Bootstrap support for F6ZX31 as seed ortholog is 100%.
Bootstrap support for H3D397 as seed ortholog is 76%.

Group of orthologs #4795. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:39

F6SGR7              	100.00%		Q4SJT4              	100.00%
Bootstrap support for F6SGR7 as seed ortholog is 96%.
Bootstrap support for Q4SJT4 as seed ortholog is 88%.

Group of orthologs #4796. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

H2XKL9              	100.00%		Q4SNS3              	100.00%
Bootstrap support for H2XKL9 as seed ortholog is 100%.
Bootstrap support for Q4SNS3 as seed ortholog is 100%.

Group of orthologs #4797. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

H2XTC8              	100.00%		Q4STM1              	100.00%
Bootstrap support for H2XTC8 as seed ortholog is 100%.
Bootstrap support for Q4STM1 as seed ortholog is 100%.

Group of orthologs #4798. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

H2XXT0              	100.00%		Q4S0R6              	100.00%
Bootstrap support for H2XXT0 as seed ortholog is 100%.
Bootstrap support for Q4S0R6 as seed ortholog is 100%.

Group of orthologs #4799. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 T.nigroviridis:101

H2Y2B5              	100.00%		H3DN62              	100.00%
Bootstrap support for H2Y2B5 as seed ortholog is 100%.
Bootstrap support for H3DN62 as seed ortholog is 100%.

Group of orthologs #4800. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:100

H2XKE6              	100.00%		H3DFF1              	100.00%
F6RNA2              	6.84%		
Bootstrap support for H2XKE6 as seed ortholog is 56%.
Alternative seed ortholog is H2XUU0 (8 bits away from this cluster)
Bootstrap support for H3DFF1 as seed ortholog is 100%.

Group of orthologs #4801. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:100

H2Y3B8              	100.00%		H3D4Z3              	100.00%
                    	       		H3C246              	32.28%
Bootstrap support for H2Y3B8 as seed ortholog is 100%.
Bootstrap support for H3D4Z3 as seed ortholog is 100%.

Group of orthologs #4802. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:100

F6SET0              	100.00%		H3CRT4              	100.00%
Bootstrap support for F6SET0 as seed ortholog is 100%.
Bootstrap support for H3CRT4 as seed ortholog is 100%.

Group of orthologs #4803. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:100

F6PL73              	100.00%		Q4RX10              	100.00%
Bootstrap support for F6PL73 as seed ortholog is 100%.
Bootstrap support for Q4RX10 as seed ortholog is 100%.

Group of orthologs #4804. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 T.nigroviridis:100

F6ZRG6              	100.00%		H3D1N0              	100.00%
Bootstrap support for F6ZRG6 as seed ortholog is 54%.
Alternative seed ortholog is F6URD6 (5 bits away from this cluster)
Bootstrap support for H3D1N0 as seed ortholog is 100%.

Group of orthologs #4805. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 T.nigroviridis:100

H2XUP2              	100.00%		H3D7K4              	100.00%
Bootstrap support for H2XUP2 as seed ortholog is 100%.
Bootstrap support for H3D7K4 as seed ortholog is 100%.

Group of orthologs #4806. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6WQA0              	100.00%		H3DLA3              	100.00%
                    	       		Q49LS9              	72.96%
                    	       		Q49LS8              	39.10%
                    	       		H3D9U2              	36.38%
                    	       		H3BZQ5              	27.64%
                    	       		Q49LS7              	11.36%
                    	       		H3CJ44              	11.26%
Bootstrap support for F6WQA0 as seed ortholog is 100%.
Bootstrap support for H3DLA3 as seed ortholog is 100%.

Group of orthologs #4807. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:50

Q4H3C6              	100.00%		H3C791              	100.00%
                    	       		H3C7A4              	32.34%
                    	       		H3C794              	31.56%
                    	       		H3CXK5              	6.75%
Bootstrap support for Q4H3C6 as seed ortholog is 99%.
Bootstrap support for H3C791 as seed ortholog is 99%.

Group of orthologs #4808. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6X197              	100.00%		H3CZX8              	100.00%
                    	       		H3C8A7              	17.96%
Bootstrap support for F6X197 as seed ortholog is 100%.
Bootstrap support for H3CZX8 as seed ortholog is 100%.

Group of orthologs #4809. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6TXQ6              	100.00%		H3DCS6              	100.00%
F6V198              	33.53%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for H3DCS6 as seed ortholog is 100%.

Group of orthologs #4810. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6R384              	100.00%		H3CIY6              	100.00%
Bootstrap support for F6R384 as seed ortholog is 100%.
Bootstrap support for H3CIY6 as seed ortholog is 100%.

Group of orthologs #4811. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6ZP13              	100.00%		H3C9V8              	100.00%
Bootstrap support for F6ZP13 as seed ortholog is 100%.
Bootstrap support for H3C9V8 as seed ortholog is 100%.

Group of orthologs #4812. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6UVD1              	100.00%		H3D6D7              	100.00%
Bootstrap support for F6UVD1 as seed ortholog is 100%.
Bootstrap support for H3D6D7 as seed ortholog is 100%.

Group of orthologs #4813. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6UPX6              	100.00%		H3DEJ1              	100.00%
Bootstrap support for F6UPX6 as seed ortholog is 100%.
Bootstrap support for H3DEJ1 as seed ortholog is 100%.

Group of orthologs #4814. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

H2XZE6              	100.00%		H3C2G3              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for H3C2G3 as seed ortholog is 100%.

Group of orthologs #4815. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F6YMG8              	100.00%		H3DBY3              	100.00%
Bootstrap support for F6YMG8 as seed ortholog is 100%.
Bootstrap support for H3DBY3 as seed ortholog is 100%.

Group of orthologs #4816. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F7AUH4              	100.00%		Q4RP86              	100.00%
Bootstrap support for F7AUH4 as seed ortholog is 100%.
Bootstrap support for Q4RP86 as seed ortholog is 100%.

Group of orthologs #4817. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

H2XLG7              	100.00%		H3DPV8              	100.00%
Bootstrap support for H2XLG7 as seed ortholog is 100%.
Bootstrap support for H3DPV8 as seed ortholog is 100%.

Group of orthologs #4818. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

F7BBC3              	100.00%		Q4SRN3              	100.00%
Bootstrap support for F7BBC3 as seed ortholog is 100%.
Bootstrap support for Q4SRN3 as seed ortholog is 100%.

Group of orthologs #4819. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 T.nigroviridis:99

H2Y3A6              	100.00%		H3DHP3              	100.00%
Bootstrap support for H2Y3A6 as seed ortholog is 100%.
Bootstrap support for H3DHP3 as seed ortholog is 100%.

Group of orthologs #4820. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 T.nigroviridis:41

H2XQ52              	100.00%		H3D4W4              	100.00%
H2XRP5              	9.76%		
F6TGJ7              	8.78%		
Bootstrap support for H2XQ52 as seed ortholog is 56%.
Alternative seed ortholog is F6ZED8 (9 bits away from this cluster)
Bootstrap support for H3D4W4 as seed ortholog is 85%.

Group of orthologs #4821. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:98

F6RDV2              	100.00%		H3CBN1              	100.00%
                    	       		H3CF74              	17.89%
Bootstrap support for F6RDV2 as seed ortholog is 100%.
Bootstrap support for H3CBN1 as seed ortholog is 100%.

Group of orthologs #4822. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:98

H2XTI2              	100.00%		H3C384              	100.00%
                    	       		H3D9K2              	12.78%
Bootstrap support for H2XTI2 as seed ortholog is 100%.
Bootstrap support for H3C384 as seed ortholog is 100%.

Group of orthologs #4823. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:98

H2XSV0              	100.00%		H3DR50              	100.00%
                    	       		H3D0V2              	20.00%
Bootstrap support for H2XSV0 as seed ortholog is 100%.
Bootstrap support for H3DR50 as seed ortholog is 100%.

Group of orthologs #4824. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:39

F6YYR4              	100.00%		H3BZE8              	100.00%
Bootstrap support for F6YYR4 as seed ortholog is 100%.
Bootstrap support for H3BZE8 as seed ortholog is 99%.

Group of orthologs #4825. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:98

F7BAE5              	100.00%		H3D4P5              	100.00%
Bootstrap support for F7BAE5 as seed ortholog is 100%.
Bootstrap support for H3D4P5 as seed ortholog is 100%.

Group of orthologs #4826. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:98

F6Y9H6              	100.00%		Q4RZB3              	100.00%
Bootstrap support for F6Y9H6 as seed ortholog is 100%.
Bootstrap support for Q4RZB3 as seed ortholog is 100%.

Group of orthologs #4827. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 T.nigroviridis:98

H2XZ55              	100.00%		H3DFV4              	100.00%
Bootstrap support for H2XZ55 as seed ortholog is 100%.
Bootstrap support for H3DFV4 as seed ortholog is 100%.

Group of orthologs #4828. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:97

Q1RLI5              	100.00%		H3CE60              	100.00%
                    	       		H3D430              	25.31%
                    	       		H3DK43              	19.65%
Bootstrap support for Q1RLI5 as seed ortholog is 100%.
Bootstrap support for H3CE60 as seed ortholog is 100%.

Group of orthologs #4829. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:35

F6YG06              	100.00%		H3DG57              	100.00%
                    	       		H3DHI4              	12.56%
Bootstrap support for F6YG06 as seed ortholog is 100%.
Bootstrap support for H3DG57 as seed ortholog is 90%.

Group of orthologs #4830. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:22

Q4H3E8              	100.00%		H3CJ75              	100.00%
                    	       		Q4S3X1              	35.31%
Bootstrap support for Q4H3E8 as seed ortholog is 100%.
Bootstrap support for H3CJ75 as seed ortholog is 77%.

Group of orthologs #4831. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:20

F6R6V8              	100.00%		H3BWF1              	100.00%
Bootstrap support for F6R6V8 as seed ortholog is 100%.
Bootstrap support for H3BWF1 as seed ortholog is 70%.
Alternative seed ortholog is Q4SLR9 (20 bits away from this cluster)

Group of orthologs #4832. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:97

F6WZ37              	100.00%		H3C3K7              	100.00%
Bootstrap support for F6WZ37 as seed ortholog is 100%.
Bootstrap support for H3C3K7 as seed ortholog is 100%.

Group of orthologs #4833. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:97

F6ZWC8              	100.00%		H3C6K8              	100.00%
Bootstrap support for F6ZWC8 as seed ortholog is 100%.
Bootstrap support for H3C6K8 as seed ortholog is 100%.

Group of orthologs #4834. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:31

H2XMX4              	100.00%		H3C9N5              	100.00%
Bootstrap support for H2XMX4 as seed ortholog is 100%.
Bootstrap support for H3C9N5 as seed ortholog is 82%.

Group of orthologs #4835. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:97

F6ZIU2              	100.00%		H3D9E4              	100.00%
Bootstrap support for F6ZIU2 as seed ortholog is 100%.
Bootstrap support for H3D9E4 as seed ortholog is 100%.

Group of orthologs #4836. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:18

F7BKQ3              	100.00%		H3D6C3              	100.00%
Bootstrap support for F7BKQ3 as seed ortholog is 100%.
Bootstrap support for H3D6C3 as seed ortholog is 72%.
Alternative seed ortholog is H3CTM1 (18 bits away from this cluster)

Group of orthologs #4837. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 T.nigroviridis:97

L7N0R1              	100.00%		Q4S8G0              	100.00%
Bootstrap support for L7N0R1 as seed ortholog is 100%.
Bootstrap support for Q4S8G0 as seed ortholog is 100%.

Group of orthologs #4838. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:96

F7BEW6              	100.00%		H3C821              	100.00%
F6QYI8              	32.09%		
Bootstrap support for F7BEW6 as seed ortholog is 100%.
Bootstrap support for H3C821 as seed ortholog is 100%.

Group of orthologs #4839. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:96

F7BP46              	100.00%		H3DC92              	100.00%
                    	       		H3CVF8              	33.00%
Bootstrap support for F7BP46 as seed ortholog is 100%.
Bootstrap support for H3DC92 as seed ortholog is 100%.

Group of orthologs #4840. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 T.nigroviridis:10

H2XME7              	100.00%		H3DC19              	100.00%
                    	       		H3CFW3              	16.22%
Bootstrap support for H2XME7 as seed ortholog is 64%.
Alternative seed ortholog is H2XVS5 (13 bits away from this cluster)
Bootstrap support for H3DC19 as seed ortholog is 64%.
Alternative seed ortholog is H3C3A2 (10 bits away from this cluster)

Group of orthologs #4841. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:96

F6WQK5              	100.00%		H3C1U7              	100.00%
Bootstrap support for F6WQK5 as seed ortholog is 100%.
Bootstrap support for H3C1U7 as seed ortholog is 100%.

Group of orthologs #4842. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 T.nigroviridis:20

F6UZ38              	100.00%		H3CDC1              	100.00%
Bootstrap support for F6UZ38 as seed ortholog is 53%.
Alternative seed ortholog is H2XRK5 (0 bits away from this cluster)
Bootstrap support for H3CDC1 as seed ortholog is 77%.

Group of orthologs #4843. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:96

F6XM37              	100.00%		H3CZW2              	100.00%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for H3CZW2 as seed ortholog is 100%.

Group of orthologs #4844. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:96

F6SD13              	100.00%		Q4SC00              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for Q4SC00 as seed ortholog is 100%.

Group of orthologs #4845. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 T.nigroviridis:96

H2XLR4              	100.00%		Q4RN90              	100.00%
Bootstrap support for H2XLR4 as seed ortholog is 100%.
Bootstrap support for Q4RN90 as seed ortholog is 100%.

Group of orthologs #4846. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:8

F6ZNX5              	100.00%		H3C6N2              	100.00%
H2Y0F5              	21.30%		H3BYK1              	55.12%
Bootstrap support for F6ZNX5 as seed ortholog is 100%.
Bootstrap support for H3C6N2 as seed ortholog is 68%.
Alternative seed ortholog is Q4TDK7 (8 bits away from this cluster)

Group of orthologs #4847. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 T.nigroviridis:95

F7BLR9              	100.00%		H3CMM6              	100.00%
Bootstrap support for F7BLR9 as seed ortholog is 98%.
Bootstrap support for H3CMM6 as seed ortholog is 100%.

Group of orthologs #4848. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:95

F6UE09              	100.00%		H3DDQ3              	100.00%
Bootstrap support for F6UE09 as seed ortholog is 100%.
Bootstrap support for H3DDQ3 as seed ortholog is 100%.

Group of orthologs #4849. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 T.nigroviridis:95

H2XUY8              	100.00%		H3D043              	100.00%
Bootstrap support for H2XUY8 as seed ortholog is 89%.
Bootstrap support for H3D043 as seed ortholog is 100%.

Group of orthologs #4850. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:50

F7BPT5              	100.00%		Q4RUG3              	100.00%
Bootstrap support for F7BPT5 as seed ortholog is 100%.
Bootstrap support for Q4RUG3 as seed ortholog is 100%.

Group of orthologs #4851. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 T.nigroviridis:95

H2XVM5              	100.00%		H3DP04              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 100%.
Bootstrap support for H3DP04 as seed ortholog is 100%.

Group of orthologs #4852. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:94

H2XU26              	100.00%		H3DBH5              	100.00%
                    	       		H3CTZ0              	29.37%
                    	       		Q4RIW5              	23.54%
                    	       		H3D5N3              	22.89%
Bootstrap support for H2XU26 as seed ortholog is 94%.
Bootstrap support for H3DBH5 as seed ortholog is 100%.

Group of orthologs #4853. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

H2XYA3              	100.00%		H3CGF2              	100.00%
F6TDG4              	36.42%		H3D2Z6              	10.34%
Bootstrap support for H2XYA3 as seed ortholog is 100%.
Bootstrap support for H3CGF2 as seed ortholog is 100%.

Group of orthologs #4854. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

F6Z4I8              	100.00%		H3C204              	100.00%
                    	       		H3DE90              	11.31%
Bootstrap support for F6Z4I8 as seed ortholog is 100%.
Bootstrap support for H3C204 as seed ortholog is 100%.

Group of orthologs #4855. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

H2XPQ8              	100.00%		H3C9I4              	100.00%
                    	       		H3D2Q0              	7.01%
Bootstrap support for H2XPQ8 as seed ortholog is 100%.
Bootstrap support for H3C9I4 as seed ortholog is 100%.

Group of orthologs #4856. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

H2XXQ5              	100.00%		H3C5N9              	100.00%
Bootstrap support for H2XXQ5 as seed ortholog is 100%.
Bootstrap support for H3C5N9 as seed ortholog is 100%.

Group of orthologs #4857. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:46

F6ZLV3              	100.00%		H3DK46              	100.00%
Bootstrap support for F6ZLV3 as seed ortholog is 100%.
Bootstrap support for H3DK46 as seed ortholog is 98%.

Group of orthologs #4858. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 T.nigroviridis:24

F6YHK2              	100.00%		Q4SE29              	100.00%
Bootstrap support for F6YHK2 as seed ortholog is 73%.
Alternative seed ortholog is H2Y3F2 (20 bits away from this cluster)
Bootstrap support for Q4SE29 as seed ortholog is 81%.

Group of orthologs #4859. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

H2XQN1              	100.00%		Q4SM55              	100.00%
Bootstrap support for H2XQN1 as seed ortholog is 100%.
Bootstrap support for Q4SM55 as seed ortholog is 100%.

Group of orthologs #4860. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

H2Y167              	100.00%		Q4RUA5              	100.00%
Bootstrap support for H2Y167 as seed ortholog is 100%.
Bootstrap support for Q4RUA5 as seed ortholog is 100%.

Group of orthologs #4861. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

H2Y2G8              	100.00%		Q4RFB6              	100.00%
Bootstrap support for H2Y2G8 as seed ortholog is 100%.
Bootstrap support for Q4RFB6 as seed ortholog is 100%.

Group of orthologs #4862. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 T.nigroviridis:94

Q8MXX3              	100.00%		Q4RLI9              	100.00%
Bootstrap support for Q8MXX3 as seed ortholog is 100%.
Bootstrap support for Q4RLI9 as seed ortholog is 100%.

Group of orthologs #4863. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

F6WEI4              	100.00%		Q4SLW2              	100.00%
                    	       		H3CVZ0              	84.18%
Bootstrap support for F6WEI4 as seed ortholog is 100%.
Bootstrap support for Q4SLW2 as seed ortholog is 100%.

Group of orthologs #4864. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

F6PLC9              	100.00%		H3CGP1              	100.00%
Bootstrap support for F6PLC9 as seed ortholog is 100%.
Bootstrap support for H3CGP1 as seed ortholog is 100%.

Group of orthologs #4865. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

F6Y3N8              	100.00%		H3C5C2              	100.00%
Bootstrap support for F6Y3N8 as seed ortholog is 100%.
Bootstrap support for H3C5C2 as seed ortholog is 100%.

Group of orthologs #4866. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:53

F7B2I2              	100.00%		H3C769              	100.00%
Bootstrap support for F7B2I2 as seed ortholog is 100%.
Bootstrap support for H3C769 as seed ortholog is 95%.

Group of orthologs #4867. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

F7AGE4              	100.00%		H3CTM9              	100.00%
Bootstrap support for F7AGE4 as seed ortholog is 100%.
Bootstrap support for H3CTM9 as seed ortholog is 100%.

Group of orthologs #4868. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

F6YTC9              	100.00%		H3D1J9              	100.00%
Bootstrap support for F6YTC9 as seed ortholog is 100%.
Bootstrap support for H3D1J9 as seed ortholog is 100%.

Group of orthologs #4869. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

H2XN49              	100.00%		H3DCX9              	100.00%
Bootstrap support for H2XN49 as seed ortholog is 100%.
Bootstrap support for H3DCX9 as seed ortholog is 100%.

Group of orthologs #4870. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 T.nigroviridis:93

H2XXN7              	100.00%		H3DPG9              	100.00%
Bootstrap support for H2XXN7 as seed ortholog is 100%.
Bootstrap support for H3DPG9 as seed ortholog is 100%.

Group of orthologs #4871. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

F7A8B4              	100.00%		H3D596              	100.00%
                    	       		H3DRA3              	40.05%
                    	       		H3DJW3              	36.61%
Bootstrap support for F7A8B4 as seed ortholog is 100%.
Bootstrap support for H3D596 as seed ortholog is 100%.

Group of orthologs #4872. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

F6X972              	100.00%		H3D5Q7              	100.00%
                    	       		H3DC90              	21.60%
Bootstrap support for F6X972 as seed ortholog is 100%.
Bootstrap support for H3D5Q7 as seed ortholog is 100%.

Group of orthologs #4873. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

F6PKA8              	100.00%		H3D8R8              	100.00%
Bootstrap support for F6PKA8 as seed ortholog is 100%.
Bootstrap support for H3D8R8 as seed ortholog is 100%.

Group of orthologs #4874. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

H2XLU3              	100.00%		H3CS89              	100.00%
Bootstrap support for H2XLU3 as seed ortholog is 100%.
Bootstrap support for H3CS89 as seed ortholog is 100%.

Group of orthologs #4875. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

H2XYT0              	100.00%		H3CAI7              	100.00%
Bootstrap support for H2XYT0 as seed ortholog is 100%.
Bootstrap support for H3CAI7 as seed ortholog is 100%.

Group of orthologs #4876. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

F6RR57              	100.00%		Q4SIG2              	100.00%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for Q4SIG2 as seed ortholog is 100%.

Group of orthologs #4877. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

H2Y0I2              	100.00%		H3C7Y4              	100.00%
Bootstrap support for H2Y0I2 as seed ortholog is 100%.
Bootstrap support for H3C7Y4 as seed ortholog is 100%.

Group of orthologs #4878. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

H2Y080              	100.00%		H3CS34              	100.00%
Bootstrap support for H2Y080 as seed ortholog is 100%.
Bootstrap support for H3CS34 as seed ortholog is 100%.

Group of orthologs #4879. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

F6ZYN8              	100.00%		Q4TBF3              	100.00%
Bootstrap support for F6ZYN8 as seed ortholog is 100%.
Bootstrap support for Q4TBF3 as seed ortholog is 100%.

Group of orthologs #4880. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 T.nigroviridis:92

H2XJX4              	100.00%		Q4T248              	100.00%
Bootstrap support for H2XJX4 as seed ortholog is 100%.
Bootstrap support for Q4T248 as seed ortholog is 100%.

Group of orthologs #4881. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

H2XS41              	100.00%		H3C8M4              	100.00%
F6WI10              	22.84%		
H2XQP6              	8.78%		
Bootstrap support for H2XS41 as seed ortholog is 100%.
Bootstrap support for H3C8M4 as seed ortholog is 100%.

Group of orthologs #4882. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

F6W310              	100.00%		H3CMN9              	100.00%
                    	       		Q4RX43              	100.00%
Bootstrap support for F6W310 as seed ortholog is 100%.
Bootstrap support for H3CMN9 as seed ortholog is 100%.
Bootstrap support for Q4RX43 as seed ortholog is 100%.

Group of orthologs #4883. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

H2XK86              	100.00%		H3C9X0              	100.00%
                    	       		H3CKK9              	13.23%
Bootstrap support for H2XK86 as seed ortholog is 100%.
Bootstrap support for H3C9X0 as seed ortholog is 100%.

Group of orthologs #4884. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

F6V675              	100.00%		H3CJU1              	100.00%
Bootstrap support for F6V675 as seed ortholog is 100%.
Bootstrap support for H3CJU1 as seed ortholog is 100%.

Group of orthologs #4885. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

F6TP68              	100.00%		H3D9R7              	100.00%
Bootstrap support for F6TP68 as seed ortholog is 100%.
Bootstrap support for H3D9R7 as seed ortholog is 100%.

Group of orthologs #4886. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

H2XQC0              	100.00%		H3CFA5              	100.00%
Bootstrap support for H2XQC0 as seed ortholog is 100%.
Bootstrap support for H3CFA5 as seed ortholog is 100%.

Group of orthologs #4887. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 T.nigroviridis:91

H2XZ03              	100.00%		H3C2G2              	100.00%
Bootstrap support for H2XZ03 as seed ortholog is 100%.
Bootstrap support for H3C2G2 as seed ortholog is 100%.

Group of orthologs #4888. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 T.nigroviridis:43

F6PMX0              	100.00%		Q4SKD1              	100.00%
F6V3N9              	14.08%		
Bootstrap support for F6PMX0 as seed ortholog is 74%.
Alternative seed ortholog is F6QLP3 (26 bits away from this cluster)
Bootstrap support for Q4SKD1 as seed ortholog is 87%.

Group of orthologs #4889. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

H2Y0H0              	100.00%		H3DIS7              	100.00%
                    	       		Q4SC06              	65.56%
Bootstrap support for H2Y0H0 as seed ortholog is 100%.
Bootstrap support for H3DIS7 as seed ortholog is 100%.

Group of orthologs #4890. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

F7A405              	100.00%		H3C6L6              	100.00%
Bootstrap support for F7A405 as seed ortholog is 100%.
Bootstrap support for H3C6L6 as seed ortholog is 100%.

Group of orthologs #4891. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

F7BMV4              	100.00%		H3C3B4              	100.00%
Bootstrap support for F7BMV4 as seed ortholog is 100%.
Bootstrap support for H3C3B4 as seed ortholog is 100%.

Group of orthologs #4892. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

F6QY65              	100.00%		H3D6B5              	100.00%
Bootstrap support for F6QY65 as seed ortholog is 100%.
Bootstrap support for H3D6B5 as seed ortholog is 100%.

Group of orthologs #4893. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

F6Y4Z5              	100.00%		H3CKX6              	100.00%
Bootstrap support for F6Y4Z5 as seed ortholog is 100%.
Bootstrap support for H3CKX6 as seed ortholog is 100%.

Group of orthologs #4894. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 T.nigroviridis:4

F6WKP3              	100.00%		H3CSF0              	100.00%
Bootstrap support for F6WKP3 as seed ortholog is 42%.
Alternative seed ortholog is F6PMJ3 (17 bits away from this cluster)
Bootstrap support for H3CSF0 as seed ortholog is 56%.
Alternative seed ortholog is H3DBM0 (4 bits away from this cluster)

Group of orthologs #4895. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

H2XKE7              	100.00%		H3CQ78              	100.00%
Bootstrap support for H2XKE7 as seed ortholog is 100%.
Bootstrap support for H3CQ78 as seed ortholog is 100%.

Group of orthologs #4896. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

H2Y1U7              	100.00%		H3BZF6              	100.00%
Bootstrap support for H2Y1U7 as seed ortholog is 100%.
Bootstrap support for H3BZF6 as seed ortholog is 100%.

Group of orthologs #4897. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

F6XY64              	100.00%		Q4T0L8              	100.00%
Bootstrap support for F6XY64 as seed ortholog is 100%.
Bootstrap support for Q4T0L8 as seed ortholog is 100%.

Group of orthologs #4898. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

H2XKD8              	100.00%		Q4RX13              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for Q4RX13 as seed ortholog is 100%.

Group of orthologs #4899. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

H2XXY9              	100.00%		H3DI86              	100.00%
Bootstrap support for H2XXY9 as seed ortholog is 100%.
Bootstrap support for H3DI86 as seed ortholog is 100%.

Group of orthologs #4900. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 T.nigroviridis:90

H2Y146              	100.00%		Q4S9N2              	100.00%
Bootstrap support for H2Y146 as seed ortholog is 100%.
Bootstrap support for Q4S9N2 as seed ortholog is 100%.

Group of orthologs #4901. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 T.nigroviridis:1

F6VG01              	100.00%		H3CTB1              	100.00%
Q8TA66              	15.52%		H3DQ07              	34.61%
F6SYN7              	12.70%		
F6U155              	5.44%		
Bootstrap support for F6VG01 as seed ortholog is 80%.
Bootstrap support for H3CTB1 as seed ortholog is 45%.
Alternative seed ortholog is H3DKI1 (1 bits away from this cluster)

Group of orthologs #4902. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

H2XV39              	100.00%		H3BX16              	100.00%
                    	       		H3DPC2              	42.50%
                    	       		H3DK92              	31.50%
Bootstrap support for H2XV39 as seed ortholog is 100%.
Bootstrap support for H3BX16 as seed ortholog is 100%.

Group of orthologs #4903. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

F6QXN6              	100.00%		H3BZH8              	100.00%
Bootstrap support for F6QXN6 as seed ortholog is 100%.
Bootstrap support for H3BZH8 as seed ortholog is 100%.

Group of orthologs #4904. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

F6R0Q7              	100.00%		H3D3A8              	100.00%
Bootstrap support for F6R0Q7 as seed ortholog is 100%.
Bootstrap support for H3D3A8 as seed ortholog is 100%.

Group of orthologs #4905. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

F6ZZS3              	100.00%		H3CAG5              	100.00%
Bootstrap support for F6ZZS3 as seed ortholog is 100%.
Bootstrap support for H3CAG5 as seed ortholog is 100%.

Group of orthologs #4906. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:35

F6Z509              	100.00%		H3CP57              	100.00%
Bootstrap support for F6Z509 as seed ortholog is 100%.
Bootstrap support for H3CP57 as seed ortholog is 54%.
Alternative seed ortholog is H3C6L0 (35 bits away from this cluster)

Group of orthologs #4907. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

F6SSS2              	100.00%		H3DJ47              	100.00%
Bootstrap support for F6SSS2 as seed ortholog is 100%.
Bootstrap support for H3DJ47 as seed ortholog is 100%.

Group of orthologs #4908. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

F7ABX1              	100.00%		H3DCS8              	100.00%
Bootstrap support for F7ABX1 as seed ortholog is 100%.
Bootstrap support for H3DCS8 as seed ortholog is 100%.

Group of orthologs #4909. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

F6YQ21              	100.00%		H3DMS1              	100.00%
Bootstrap support for F6YQ21 as seed ortholog is 100%.
Bootstrap support for H3DMS1 as seed ortholog is 100%.

Group of orthologs #4910. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

H2XR45              	100.00%		Q4RKH0              	100.00%
Bootstrap support for H2XR45 as seed ortholog is 100%.
Bootstrap support for Q4RKH0 as seed ortholog is 100%.

Group of orthologs #4911. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

H2XSJ3              	100.00%		Q4RRN4              	100.00%
Bootstrap support for H2XSJ3 as seed ortholog is 100%.
Bootstrap support for Q4RRN4 as seed ortholog is 100%.

Group of orthologs #4912. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 T.nigroviridis:89

H2XYV9              	100.00%		Q4T4Z2              	100.00%
Bootstrap support for H2XYV9 as seed ortholog is 100%.
Bootstrap support for Q4T4Z2 as seed ortholog is 100%.

Group of orthologs #4913. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:15

F6VRS6              	100.00%		H3D0T2              	100.00%
                    	       		H3CZG7              	29.94%
Bootstrap support for F6VRS6 as seed ortholog is 100%.
Bootstrap support for H3D0T2 as seed ortholog is 62%.
Alternative seed ortholog is H3CPL1 (15 bits away from this cluster)

Group of orthologs #4914. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:88

L7N0T2              	100.00%		H3C933              	100.00%
                    	       		H3D0C3              	88.64%
Bootstrap support for L7N0T2 as seed ortholog is 100%.
Bootstrap support for H3C933 as seed ortholog is 100%.

Group of orthologs #4915. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:16

F6VEV6              	100.00%		H3C575              	100.00%
Bootstrap support for F6VEV6 as seed ortholog is 100%.
Bootstrap support for H3C575 as seed ortholog is 76%.

Group of orthologs #4916. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:88

H2XRD0              	100.00%		H3CLN9              	100.00%
Bootstrap support for H2XRD0 as seed ortholog is 100%.
Bootstrap support for H3CLN9 as seed ortholog is 100%.

Group of orthologs #4917. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:88

H2XLS7              	100.00%		H3CT68              	100.00%
Bootstrap support for H2XLS7 as seed ortholog is 100%.
Bootstrap support for H3CT68 as seed ortholog is 100%.

Group of orthologs #4918. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:33

H2XWM7              	100.00%		H3CX63              	100.00%
Bootstrap support for H2XWM7 as seed ortholog is 100%.
Bootstrap support for H3CX63 as seed ortholog is 98%.

Group of orthologs #4919. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:88

H2XYF7              	100.00%		H3DFV2              	100.00%
Bootstrap support for H2XYF7 as seed ortholog is 100%.
Bootstrap support for H3DFV2 as seed ortholog is 100%.

Group of orthologs #4920. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 T.nigroviridis:88

H2Y2N4              	100.00%		Q4SUE2              	100.00%
Bootstrap support for H2Y2N4 as seed ortholog is 100%.
Bootstrap support for Q4SUE2 as seed ortholog is 100%.

Group of orthologs #4921. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 T.nigroviridis:87

H2XTN9              	100.00%		H3D8R9              	100.00%
H2XTM8              	31.35%		H3DHI3              	35.56%
F6ZXS9              	28.24%		
F6VLE7              	16.06%		
H2XTD3              	6.48%		
H2XP25              	5.96%		
Bootstrap support for H2XTN9 as seed ortholog is 80%.
Bootstrap support for H3D8R9 as seed ortholog is 100%.

Group of orthologs #4922. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

F6US70              	100.00%		H3CRW8              	100.00%
F6QH26              	7.78%		H3CVC7              	45.68%
F6QD80              	7.09%		
F6UUD7              	6.55%		
Bootstrap support for F6US70 as seed ortholog is 100%.
Bootstrap support for H3CRW8 as seed ortholog is 100%.

Group of orthologs #4923. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

H2Y0X6              	100.00%		H3CWP2              	100.00%
                    	       		H3C1B5              	10.78%
Bootstrap support for H2Y0X6 as seed ortholog is 100%.
Bootstrap support for H3CWP2 as seed ortholog is 100%.

Group of orthologs #4924. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

F6TFU0              	100.00%		H3C4E4              	100.00%
Bootstrap support for F6TFU0 as seed ortholog is 100%.
Bootstrap support for H3C4E4 as seed ortholog is 100%.

Group of orthologs #4925. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

H2XKZ2              	100.00%		H3BW80              	100.00%
Bootstrap support for H2XKZ2 as seed ortholog is 100%.
Bootstrap support for H3BW80 as seed ortholog is 100%.

Group of orthologs #4926. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

F6Y820              	100.00%		H3CQ85              	100.00%
Bootstrap support for F6Y820 as seed ortholog is 100%.
Bootstrap support for H3CQ85 as seed ortholog is 100%.

Group of orthologs #4927. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

H2XPZ5              	100.00%		H3C1E5              	100.00%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for H3C1E5 as seed ortholog is 100%.

Group of orthologs #4928. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

F6UKU4              	100.00%		H3DK95              	100.00%
Bootstrap support for F6UKU4 as seed ortholog is 100%.
Bootstrap support for H3DK95 as seed ortholog is 100%.

Group of orthologs #4929. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

F6X598              	100.00%		H3DDM3              	100.00%
Bootstrap support for F6X598 as seed ortholog is 100%.
Bootstrap support for H3DDM3 as seed ortholog is 100%.

Group of orthologs #4930. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

F6TX05              	100.00%		H3DQR3              	100.00%
Bootstrap support for F6TX05 as seed ortholog is 100%.
Bootstrap support for H3DQR3 as seed ortholog is 100%.

Group of orthologs #4931. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:39

H2XYW1              	100.00%		H3CLY8              	100.00%
Bootstrap support for H2XYW1 as seed ortholog is 100%.
Bootstrap support for H3CLY8 as seed ortholog is 84%.

Group of orthologs #4932. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 T.nigroviridis:87

H2XQH9              	100.00%		Q4RYG3              	100.00%
Bootstrap support for H2XQH9 as seed ortholog is 100%.
Bootstrap support for Q4RYG3 as seed ortholog is 100%.

Group of orthologs #4933. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:86

F6QZW7              	100.00%		H3C9K8              	100.00%
Bootstrap support for F6QZW7 as seed ortholog is 100%.
Bootstrap support for H3C9K8 as seed ortholog is 100%.

Group of orthologs #4934. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:22

F6R3I1              	100.00%		H3C9D2              	100.00%
Bootstrap support for F6R3I1 as seed ortholog is 100%.
Bootstrap support for H3C9D2 as seed ortholog is 81%.

Group of orthologs #4935. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:86

F6RIC2              	100.00%		H3CIM4              	100.00%
Bootstrap support for F6RIC2 as seed ortholog is 100%.
Bootstrap support for H3CIM4 as seed ortholog is 100%.

Group of orthologs #4936. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:86

H2XQV7              	100.00%		H3CN25              	100.00%
Bootstrap support for H2XQV7 as seed ortholog is 100%.
Bootstrap support for H3CN25 as seed ortholog is 100%.

Group of orthologs #4937. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:86

H2XY19              	100.00%		H3CHA1              	100.00%
Bootstrap support for H2XY19 as seed ortholog is 100%.
Bootstrap support for H3CHA1 as seed ortholog is 100%.

Group of orthologs #4938. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 T.nigroviridis:24

H2Y0I3              	100.00%		H3CEZ8              	100.00%
Bootstrap support for H2Y0I3 as seed ortholog is 84%.
Bootstrap support for H3CEZ8 as seed ortholog is 84%.

Group of orthologs #4939. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 T.nigroviridis:86

H2XY39              	100.00%		H3DNL8              	100.00%
Bootstrap support for H2XY39 as seed ortholog is 100%.
Bootstrap support for H3DNL8 as seed ortholog is 100%.

Group of orthologs #4940. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:85

F6PML6              	100.00%		H3C5I1              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for H3C5I1 as seed ortholog is 100%.

Group of orthologs #4941. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:85

F6W1Z3              	100.00%		H3CI60              	100.00%
Bootstrap support for F6W1Z3 as seed ortholog is 100%.
Bootstrap support for H3CI60 as seed ortholog is 100%.

Group of orthologs #4942. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:85

F6Y9P8              	100.00%		H3CAX5              	100.00%
Bootstrap support for F6Y9P8 as seed ortholog is 100%.
Bootstrap support for H3CAX5 as seed ortholog is 100%.

Group of orthologs #4943. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:85

F6YVN3              	100.00%		H3D9M0              	100.00%
Bootstrap support for F6YVN3 as seed ortholog is 100%.
Bootstrap support for H3D9M0 as seed ortholog is 100%.

Group of orthologs #4944. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 T.nigroviridis:85

H2XM23              	100.00%		H3D8P1              	100.00%
Bootstrap support for H2XM23 as seed ortholog is 100%.
Bootstrap support for H3D8P1 as seed ortholog is 100%.

Group of orthologs #4945. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:85

H2XR16              	100.00%		H3DGY3              	100.00%
Bootstrap support for H2XR16 as seed ortholog is 88%.
Bootstrap support for H3DGY3 as seed ortholog is 100%.

Group of orthologs #4946. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 T.nigroviridis:18

F6QBW9              	100.00%		H3BWL4              	100.00%
                    	       		Q4SPY3              	43.78%
                    	       		H3BZN5              	13.51%
Bootstrap support for F6QBW9 as seed ortholog is 89%.
Bootstrap support for H3BWL4 as seed ortholog is 79%.

Group of orthologs #4947. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:24

H2XRF2              	100.00%		H3BVJ6              	100.00%
                    	       		H3BWW4              	100.00%
Bootstrap support for H2XRF2 as seed ortholog is 100%.
Bootstrap support for H3BVJ6 as seed ortholog is 88%.
Bootstrap support for H3BWW4 as seed ortholog is 91%.

Group of orthologs #4948. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:84

F7B8Z4              	100.00%		H3D1C8              	100.00%
                    	       		H3CKZ1              	40.34%
Bootstrap support for F7B8Z4 as seed ortholog is 100%.
Bootstrap support for H3D1C8 as seed ortholog is 100%.

Group of orthologs #4949. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:84

F6PXZ5              	100.00%		H3CMQ1              	100.00%
Bootstrap support for F6PXZ5 as seed ortholog is 100%.
Bootstrap support for H3CMQ1 as seed ortholog is 100%.

Group of orthologs #4950. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:84

F6S8K0              	100.00%		H3CIN7              	100.00%
Bootstrap support for F6S8K0 as seed ortholog is 100%.
Bootstrap support for H3CIN7 as seed ortholog is 100%.

Group of orthologs #4951. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:4

F6ZAX4              	100.00%		H3C0S0              	100.00%
Bootstrap support for F6ZAX4 as seed ortholog is 100%.
Bootstrap support for H3C0S0 as seed ortholog is 56%.
Alternative seed ortholog is H3CGU0 (4 bits away from this cluster)

Group of orthologs #4952. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:84

F6Z3Z5              	100.00%		H3CPX4              	100.00%
Bootstrap support for F6Z3Z5 as seed ortholog is 100%.
Bootstrap support for H3CPX4 as seed ortholog is 100%.

Group of orthologs #4953. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 T.nigroviridis:84

H2XZU9              	100.00%		H3CCU0              	100.00%
Bootstrap support for H2XZU9 as seed ortholog is 100%.
Bootstrap support for H3CCU0 as seed ortholog is 100%.

Group of orthologs #4954. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:83

H2XSS0              	100.00%		Q4TBZ1              	100.00%
                    	       		H3CXQ3              	66.11%
                    	       		H3CMF9              	48.95%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for Q4TBZ1 as seed ortholog is 100%.

Group of orthologs #4955. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:31

H2XRX3              	100.00%		H3C8X3              	100.00%
                    	       		H3CNY9              	100.00%
Bootstrap support for H2XRX3 as seed ortholog is 100%.
Bootstrap support for H3C8X3 as seed ortholog is 97%.
Bootstrap support for H3CNY9 as seed ortholog is 96%.

Group of orthologs #4956. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:83

H2XXZ8              	100.00%		H3CSE9              	100.00%
                    	       		H3CCJ7              	30.94%
Bootstrap support for H2XXZ8 as seed ortholog is 100%.
Bootstrap support for H3CSE9 as seed ortholog is 100%.

Group of orthologs #4957. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:83

F6RIF9              	100.00%		H3C6D8              	100.00%
Bootstrap support for F6RIF9 as seed ortholog is 100%.
Bootstrap support for H3C6D8 as seed ortholog is 100%.

Group of orthologs #4958. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:83

H2XRN8              	100.00%		H3CPN8              	100.00%
Bootstrap support for H2XRN8 as seed ortholog is 100%.
Bootstrap support for H3CPN8 as seed ortholog is 100%.

Group of orthologs #4959. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 T.nigroviridis:83

F7B7C2              	100.00%		H3DDW2              	100.00%
Bootstrap support for F7B7C2 as seed ortholog is 100%.
Bootstrap support for H3DDW2 as seed ortholog is 100%.

Group of orthologs #4960. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

H2XWM5              	100.00%		H3DPC0              	100.00%
                    	       		H3DKJ1              	14.29%
                    	       		H3DK88              	13.32%
Bootstrap support for H2XWM5 as seed ortholog is 100%.
Bootstrap support for H3DPC0 as seed ortholog is 100%.

Group of orthologs #4961. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

H2XVU7              	100.00%		H3CMA6              	100.00%
                    	       		Q4STI0              	55.47%
Bootstrap support for H2XVU7 as seed ortholog is 100%.
Bootstrap support for H3CMA6 as seed ortholog is 100%.

Group of orthologs #4962. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

F7B7V5              	100.00%		H3D7V4              	100.00%
                    	       		H3DI64              	7.59%
Bootstrap support for F7B7V5 as seed ortholog is 100%.
Bootstrap support for H3D7V4 as seed ortholog is 100%.

Group of orthologs #4963. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

F6TZN8              	100.00%		H3CTH9              	100.00%
Bootstrap support for F6TZN8 as seed ortholog is 100%.
Bootstrap support for H3CTH9 as seed ortholog is 100%.

Group of orthologs #4964. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

F6QTX2              	100.00%		H3D9B0              	100.00%
Bootstrap support for F6QTX2 as seed ortholog is 100%.
Bootstrap support for H3D9B0 as seed ortholog is 100%.

Group of orthologs #4965. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

F6W8X6              	100.00%		H3DC10              	100.00%
Bootstrap support for F6W8X6 as seed ortholog is 100%.
Bootstrap support for H3DC10 as seed ortholog is 100%.

Group of orthologs #4966. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

H2XZH5              	100.00%		H3CE18              	100.00%
Bootstrap support for H2XZH5 as seed ortholog is 100%.
Bootstrap support for H3CE18 as seed ortholog is 100%.

Group of orthologs #4967. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:19

F6W8U8              	100.00%		Q4S6K4              	100.00%
Bootstrap support for F6W8U8 as seed ortholog is 91%.
Bootstrap support for Q4S6K4 as seed ortholog is 81%.

Group of orthologs #4968. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

F6ZSI1              	100.00%		H3DIM7              	100.00%
Bootstrap support for F6ZSI1 as seed ortholog is 100%.
Bootstrap support for H3DIM7 as seed ortholog is 100%.

Group of orthologs #4969. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 T.nigroviridis:82

F7AE79              	100.00%		H3DP52              	100.00%
Bootstrap support for F7AE79 as seed ortholog is 100%.
Bootstrap support for H3DP52 as seed ortholog is 100%.

Group of orthologs #4970. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

F6S9U6              	100.00%		H3C8P9              	100.00%
                    	       		H3DPC9              	23.36%
                    	       		H3D3S0              	7.44%
Bootstrap support for F6S9U6 as seed ortholog is 100%.
Bootstrap support for H3C8P9 as seed ortholog is 100%.

Group of orthologs #4971. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 T.nigroviridis:81

H2XPX8              	100.00%		Q4SJX3              	100.00%
H2XKE5              	36.28%		H3DC02              	75.66%
Bootstrap support for H2XPX8 as seed ortholog is 63%.
Alternative seed ortholog is F7ALS7 (15 bits away from this cluster)
Bootstrap support for Q4SJX3 as seed ortholog is 100%.

Group of orthologs #4972. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

F6RQR6              	100.00%		H3CU76              	100.00%
                    	       		H3D5A3              	34.40%
Bootstrap support for F6RQR6 as seed ortholog is 100%.
Bootstrap support for H3CU76 as seed ortholog is 100%.

Group of orthologs #4973. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

H2XTM4              	100.00%		H3BZB2              	100.00%
H2Y023              	46.94%		
Bootstrap support for H2XTM4 as seed ortholog is 100%.
Bootstrap support for H3BZB2 as seed ortholog is 100%.

Group of orthologs #4974. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

F6PHD5              	100.00%		H3BY77              	100.00%
Bootstrap support for F6PHD5 as seed ortholog is 100%.
Bootstrap support for H3BY77 as seed ortholog is 100%.

Group of orthologs #4975. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 T.nigroviridis:32

F6R1E8              	100.00%		H3D753              	100.00%
Bootstrap support for F6R1E8 as seed ortholog is 63%.
Alternative seed ortholog is F6WKL8 (12 bits away from this cluster)
Bootstrap support for H3D753 as seed ortholog is 83%.

Group of orthologs #4976. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

F6RJZ1              	100.00%		H3DCB2              	100.00%
Bootstrap support for F6RJZ1 as seed ortholog is 100%.
Bootstrap support for H3DCB2 as seed ortholog is 100%.

Group of orthologs #4977. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

H2XTY0              	100.00%		H3CA63              	100.00%
Bootstrap support for H2XTY0 as seed ortholog is 100%.
Bootstrap support for H3CA63 as seed ortholog is 100%.

Group of orthologs #4978. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

H2XTV9              	100.00%		H3CND8              	100.00%
Bootstrap support for H2XTV9 as seed ortholog is 100%.
Bootstrap support for H3CND8 as seed ortholog is 100%.

Group of orthologs #4979. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

H2XVV1              	100.00%		H3CMC5              	100.00%
Bootstrap support for H2XVV1 as seed ortholog is 100%.
Bootstrap support for H3CMC5 as seed ortholog is 100%.

Group of orthologs #4980. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

F7AEJ9              	100.00%		H3DB45              	100.00%
Bootstrap support for F7AEJ9 as seed ortholog is 100%.
Bootstrap support for H3DB45 as seed ortholog is 100%.

Group of orthologs #4981. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

H2Y0C6              	100.00%		H3CLW4              	100.00%
Bootstrap support for H2Y0C6 as seed ortholog is 100%.
Bootstrap support for H3CLW4 as seed ortholog is 100%.

Group of orthologs #4982. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 T.nigroviridis:81

H2Y1J5              	100.00%		H3DB61              	100.00%
Bootstrap support for H2Y1J5 as seed ortholog is 100%.
Bootstrap support for H3DB61 as seed ortholog is 100%.

Group of orthologs #4983. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 T.nigroviridis:80

F6T7K5              	100.00%		H3C8F7              	100.00%
F6T7L2              	15.71%		
H2Y2X3              	14.50%		
Bootstrap support for F6T7K5 as seed ortholog is 100%.
Bootstrap support for H3C8F7 as seed ortholog is 100%.

Group of orthologs #4984. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 T.nigroviridis:80

F6X8V6              	100.00%		H3D3T9              	100.00%
Bootstrap support for F6X8V6 as seed ortholog is 100%.
Bootstrap support for H3D3T9 as seed ortholog is 100%.

Group of orthologs #4985. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 T.nigroviridis:80

F6ZHL3              	100.00%		H3DH32              	100.00%
Bootstrap support for F6ZHL3 as seed ortholog is 100%.
Bootstrap support for H3DH32 as seed ortholog is 100%.

Group of orthologs #4986. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

F6U2Y7              	100.00%		H3DLU8              	100.00%
                    	       		H3C2S5              	17.36%
                    	       		H3DJK8              	17.11%
                    	       		H3DLU9              	16.38%
                    	       		H3DGY2              	11.25%
Bootstrap support for F6U2Y7 as seed ortholog is 100%.
Bootstrap support for H3DLU8 as seed ortholog is 100%.

Group of orthologs #4987. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 T.nigroviridis:18

F6X9K9              	100.00%		H3CT66              	100.00%
                    	       		H3DR35              	5.95%
Bootstrap support for F6X9K9 as seed ortholog is 59%.
Alternative seed ortholog is F6Y9B7 (8 bits away from this cluster)
Bootstrap support for H3CT66 as seed ortholog is 71%.
Alternative seed ortholog is H3CIA8 (18 bits away from this cluster)

Group of orthologs #4988. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

F6X0T1              	100.00%		H3BVX0              	100.00%
Bootstrap support for F6X0T1 as seed ortholog is 100%.
Bootstrap support for H3BVX0 as seed ortholog is 100%.

Group of orthologs #4989. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

F7AWZ4              	100.00%		H3BWI7              	100.00%
Bootstrap support for F7AWZ4 as seed ortholog is 100%.
Bootstrap support for H3BWI7 as seed ortholog is 100%.

Group of orthologs #4990. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:23

F6U8Q2              	100.00%		H3D1D9              	100.00%
Bootstrap support for F6U8Q2 as seed ortholog is 100%.
Bootstrap support for H3D1D9 as seed ortholog is 86%.

Group of orthologs #4991. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

F6SD42              	100.00%		H3DAZ8              	100.00%
Bootstrap support for F6SD42 as seed ortholog is 100%.
Bootstrap support for H3DAZ8 as seed ortholog is 100%.

Group of orthologs #4992. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

H2XKK8              	100.00%		H3CQY3              	100.00%
Bootstrap support for H2XKK8 as seed ortholog is 100%.
Bootstrap support for H3CQY3 as seed ortholog is 100%.

Group of orthologs #4993. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

F6ZDJ9              	100.00%		H3DEI3              	100.00%
Bootstrap support for F6ZDJ9 as seed ortholog is 100%.
Bootstrap support for H3DEI3 as seed ortholog is 100%.

Group of orthologs #4994. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

F6VY51              	100.00%		Q4SGZ7              	100.00%
Bootstrap support for F6VY51 as seed ortholog is 100%.
Bootstrap support for Q4SGZ7 as seed ortholog is 100%.

Group of orthologs #4995. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

H2XY84              	100.00%		H3CUB5              	100.00%
Bootstrap support for H2XY84 as seed ortholog is 100%.
Bootstrap support for H3CUB5 as seed ortholog is 100%.

Group of orthologs #4996. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

H2XLR3              	100.00%		Q4RL74              	100.00%
Bootstrap support for H2XLR3 as seed ortholog is 100%.
Bootstrap support for Q4RL74 as seed ortholog is 100%.

Group of orthologs #4997. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 T.nigroviridis:79

H2Y2H3              	100.00%		Q4RK29              	100.00%
Bootstrap support for H2Y2H3 as seed ortholog is 48%.
Alternative seed ortholog is F6PV82 (1 bits away from this cluster)
Bootstrap support for Q4RK29 as seed ortholog is 100%.

Group of orthologs #4998. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 T.nigroviridis:79

Q8HIN7              	100.00%		Q4JQI6              	100.00%
Bootstrap support for Q8HIN7 as seed ortholog is 100%.
Bootstrap support for Q4JQI6 as seed ortholog is 100%.

Group of orthologs #4999. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:78

F6Z6J9              	100.00%		Q4SSS5              	100.00%
                    	       		H3DBF6              	31.11%
                    	       		H3C979              	25.19%
Bootstrap support for F6Z6J9 as seed ortholog is 81%.
Bootstrap support for Q4SSS5 as seed ortholog is 100%.

Group of orthologs #5000. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:78

F7BCU9              	100.00%		H3CXG1              	100.00%
                    	       		H3D6Y6              	41.47%
Bootstrap support for F7BCU9 as seed ortholog is 100%.
Bootstrap support for H3CXG1 as seed ortholog is 100%.

Group of orthologs #5001. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:7

Q4H363              	100.00%		H3CXD9              	100.00%
                    	       		H3DJW2              	25.65%
Bootstrap support for Q4H363 as seed ortholog is 100%.
Bootstrap support for H3CXD9 as seed ortholog is 63%.
Alternative seed ortholog is H3D7R9 (7 bits away from this cluster)

Group of orthologs #5002. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:78

F6YIH8              	100.00%		H3D8L9              	100.00%
Bootstrap support for F6YIH8 as seed ortholog is 100%.
Bootstrap support for H3D8L9 as seed ortholog is 100%.

Group of orthologs #5003. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:78

Q4H3V8              	100.00%		H3C6Q1              	100.00%
Bootstrap support for Q4H3V8 as seed ortholog is 100%.
Bootstrap support for H3C6Q1 as seed ortholog is 100%.

Group of orthologs #5004. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:26

H2XUG2              	100.00%		H3D1L8              	100.00%
Bootstrap support for H2XUG2 as seed ortholog is 100%.
Bootstrap support for H3D1L8 as seed ortholog is 82%.

Group of orthologs #5005. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 T.nigroviridis:78

H2XQR9              	100.00%		H3DLD3              	100.00%
Bootstrap support for H2XQR9 as seed ortholog is 100%.
Bootstrap support for H3DLD3 as seed ortholog is 100%.

Group of orthologs #5006. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

F6Q1K9              	100.00%		H3DIU7              	100.00%
F6V750              	80.19%		
H2XYK1              	38.69%		
Bootstrap support for F6Q1K9 as seed ortholog is 100%.
Bootstrap support for H3DIU7 as seed ortholog is 100%.

Group of orthologs #5007. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

H2XPF9              	100.00%		H3C858              	100.00%
                    	       		Q4T3P7              	34.08%
                    	       		H3DR07              	16.48%
Bootstrap support for H2XPF9 as seed ortholog is 100%.
Bootstrap support for H3C858 as seed ortholog is 100%.

Group of orthologs #5008. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:32

H2XV30              	100.00%		H3CTU5              	100.00%
F6RRQ4              	32.05%		
Bootstrap support for H2XV30 as seed ortholog is 100%.
Bootstrap support for H3CTU5 as seed ortholog is 83%.

Group of orthologs #5009. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:23

F6V259              	100.00%		H3C3E4              	100.00%
Bootstrap support for F6V259 as seed ortholog is 100%.
Bootstrap support for H3C3E4 as seed ortholog is 78%.

Group of orthologs #5010. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

F6T6X1              	100.00%		H3CI28              	100.00%
Bootstrap support for F6T6X1 as seed ortholog is 100%.
Bootstrap support for H3CI28 as seed ortholog is 100%.

Group of orthologs #5011. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

F6W059              	100.00%		H3CQL9              	100.00%
Bootstrap support for F6W059 as seed ortholog is 100%.
Bootstrap support for H3CQL9 as seed ortholog is 100%.

Group of orthologs #5012. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 T.nigroviridis:77

F6T6D5              	100.00%		H3D6A6              	100.00%
Bootstrap support for F6T6D5 as seed ortholog is 81%.
Bootstrap support for H3D6A6 as seed ortholog is 100%.

Group of orthologs #5013. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:8

F7A2A3              	100.00%		H3CT49              	100.00%
Bootstrap support for F7A2A3 as seed ortholog is 100%.
Bootstrap support for H3CT49 as seed ortholog is 61%.
Alternative seed ortholog is H3CT33 (8 bits away from this cluster)

Group of orthologs #5014. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

F6YV39              	100.00%		H3D2Z8              	100.00%
Bootstrap support for F6YV39 as seed ortholog is 100%.
Bootstrap support for H3D2Z8 as seed ortholog is 100%.

Group of orthologs #5015. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:10

F6W1G4              	100.00%		H3DE61              	100.00%
Bootstrap support for F6W1G4 as seed ortholog is 100%.
Bootstrap support for H3DE61 as seed ortholog is 64%.
Alternative seed ortholog is H3D815 (10 bits away from this cluster)

Group of orthologs #5016. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

F6ZJE6              	100.00%		H3D318              	100.00%
Bootstrap support for F6ZJE6 as seed ortholog is 100%.
Bootstrap support for H3D318 as seed ortholog is 100%.

Group of orthologs #5017. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 T.nigroviridis:77

F6YQ94              	100.00%		H3DNV9              	100.00%
Bootstrap support for F6YQ94 as seed ortholog is 100%.
Bootstrap support for H3DNV9 as seed ortholog is 100%.

Group of orthologs #5018. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:76

H2XTC3              	100.00%		H3C8B3              	100.00%
                    	       		H3CWF0              	19.63%
                    	       		H3C1I4              	8.88%
                    	       		H3CFZ6              	7.48%
                    	       		H3D5T3              	6.07%
Bootstrap support for H2XTC3 as seed ortholog is 100%.
Bootstrap support for H3C8B3 as seed ortholog is 100%.

Group of orthologs #5019. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:76

F6PKE5              	100.00%		Q4TAB1              	100.00%
                    	       		H3CUM4              	29.11%
                    	       		H3CGH7              	24.84%
                    	       		H3DGH9              	23.19%
                    	       		H3BXX3              	19.08%
Bootstrap support for F6PKE5 as seed ortholog is 100%.
Bootstrap support for Q4TAB1 as seed ortholog is 100%.

Group of orthologs #5020. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:76

F6X3Y1              	100.00%		H3BXS4              	100.00%
                    	       		Q4RGP2              	49.26%
                    	       		Q4S151              	47.34%
                    	       		H3CG12              	39.06%
Bootstrap support for F6X3Y1 as seed ortholog is 100%.
Bootstrap support for H3BXS4 as seed ortholog is 100%.

Group of orthologs #5021. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 T.nigroviridis:76

F6U277              	100.00%		H3C3V6              	100.00%
                    	       		H3CHB7              	19.39%
                    	       		H3DLK4              	16.59%
Bootstrap support for F6U277 as seed ortholog is 81%.
Bootstrap support for H3C3V6 as seed ortholog is 100%.

Group of orthologs #5022. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:76

F6U8W0              	100.00%		H3BXL5              	100.00%
Bootstrap support for F6U8W0 as seed ortholog is 100%.
Bootstrap support for H3BXL5 as seed ortholog is 100%.

Group of orthologs #5023. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:76

H2XP71              	100.00%		H3CDJ0              	100.00%
Bootstrap support for H2XP71 as seed ortholog is 100%.
Bootstrap support for H3CDJ0 as seed ortholog is 100%.

Group of orthologs #5024. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 T.nigroviridis:76

F7BC32              	100.00%		H3D9A9              	100.00%
Bootstrap support for F7BC32 as seed ortholog is 100%.
Bootstrap support for H3D9A9 as seed ortholog is 100%.

Group of orthologs #5025. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:75

H2Y1A4              	100.00%		H3D3X5              	100.00%
F6W615              	42.95%		
H2XN03              	37.52%		
H2Y2E0              	36.90%		
F6SJ97              	33.18%		
F6UKM1              	12.87%		
Bootstrap support for H2Y1A4 as seed ortholog is 100%.
Bootstrap support for H3D3X5 as seed ortholog is 100%.

Group of orthologs #5026. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:75

F6QPS8              	100.00%		H3DJL5              	100.00%
Bootstrap support for F6QPS8 as seed ortholog is 100%.
Bootstrap support for H3DJL5 as seed ortholog is 100%.

Group of orthologs #5027. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:7

Q4H2X3              	100.00%		H3C5L0              	100.00%
Bootstrap support for Q4H2X3 as seed ortholog is 100%.
Bootstrap support for H3C5L0 as seed ortholog is 68%.
Alternative seed ortholog is H3C213 (7 bits away from this cluster)

Group of orthologs #5028. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 T.nigroviridis:75

H2XZ00              	100.00%		H3D3J6              	100.00%
Bootstrap support for H2XZ00 as seed ortholog is 100%.
Bootstrap support for H3D3J6 as seed ortholog is 100%.

Group of orthologs #5029. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 T.nigroviridis:32

F6TBP5              	100.00%		H3BXL3              	100.00%
F6ZAZ4              	100.00%		H3BZF8              	100.00%
F6PNN6              	75.29%		H3C654              	67.52%
F6XB23              	47.11%		
F6SYC7              	46.18%		
Bootstrap support for F6TBP5 as seed ortholog is 82%.
Bootstrap support for F6ZAZ4 as seed ortholog is 81%.
Bootstrap support for H3BXL3 as seed ortholog is 82%.
Bootstrap support for H3BZF8 as seed ortholog is 88%.

Group of orthologs #5030. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

H2XQS8              	100.00%		H3CEM3              	100.00%
H2XMJ9              	15.93%		H3DHA3              	38.58%
F6U5N1              	5.01%		
Bootstrap support for H2XQS8 as seed ortholog is 100%.
Bootstrap support for H3CEM3 as seed ortholog is 100%.

Group of orthologs #5031. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

F6TTJ0              	100.00%		H3C8F0              	100.00%
Bootstrap support for F6TTJ0 as seed ortholog is 100%.
Bootstrap support for H3C8F0 as seed ortholog is 100%.

Group of orthologs #5032. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

F6SG74              	100.00%		H3DC54              	100.00%
Bootstrap support for F6SG74 as seed ortholog is 100%.
Bootstrap support for H3DC54 as seed ortholog is 100%.

Group of orthologs #5033. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 T.nigroviridis:74

F6PVL8              	100.00%		H3DMM6              	100.00%
Bootstrap support for F6PVL8 as seed ortholog is 53%.
Alternative seed ortholog is F6URD6 (0 bits away from this cluster)
Bootstrap support for H3DMM6 as seed ortholog is 100%.

Group of orthologs #5034. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

H2XSX2              	100.00%		H3CER1              	100.00%
Bootstrap support for H2XSX2 as seed ortholog is 100%.
Bootstrap support for H3CER1 as seed ortholog is 100%.

Group of orthologs #5035. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

F6ZTS3              	100.00%		H3D832              	100.00%
Bootstrap support for F6ZTS3 as seed ortholog is 100%.
Bootstrap support for H3D832 as seed ortholog is 100%.

Group of orthologs #5036. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

H2XMF0              	100.00%		H3D1S3              	100.00%
Bootstrap support for H2XMF0 as seed ortholog is 100%.
Bootstrap support for H3D1S3 as seed ortholog is 100%.

Group of orthologs #5037. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

H2XSP6              	100.00%		H3D2W5              	100.00%
Bootstrap support for H2XSP6 as seed ortholog is 100%.
Bootstrap support for H3D2W5 as seed ortholog is 100%.

Group of orthologs #5038. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 T.nigroviridis:74

H2XYB2              	100.00%		H3CZX0              	100.00%
Bootstrap support for H2XYB2 as seed ortholog is 100%.
Bootstrap support for H3CZX0 as seed ortholog is 100%.

Group of orthologs #5039. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 T.nigroviridis:10

Q19AW1              	100.00%		H3D594              	100.00%
Bootstrap support for Q19AW1 as seed ortholog is 60%.
Alternative seed ortholog is Q4H3M8 (0 bits away from this cluster)
Bootstrap support for H3D594 as seed ortholog is 72%.
Alternative seed ortholog is H3C411 (10 bits away from this cluster)

Group of orthologs #5040. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:73

F6YVI2              	100.00%		H3CRK6              	100.00%
Bootstrap support for F6YVI2 as seed ortholog is 100%.
Bootstrap support for H3CRK6 as seed ortholog is 100%.

Group of orthologs #5041. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:73

F6YAV6              	100.00%		H3CWZ8              	100.00%
Bootstrap support for F6YAV6 as seed ortholog is 100%.
Bootstrap support for H3CWZ8 as seed ortholog is 100%.

Group of orthologs #5042. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:73

H2XRN2              	100.00%		Q4RD07              	100.00%
Bootstrap support for H2XRN2 as seed ortholog is 100%.
Bootstrap support for Q4RD07 as seed ortholog is 100%.

Group of orthologs #5043. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:73

H2XV31              	100.00%		Q4RUH3              	100.00%
Bootstrap support for H2XV31 as seed ortholog is 100%.
Bootstrap support for Q4RUH3 as seed ortholog is 100%.

Group of orthologs #5044. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 T.nigroviridis:73

H2Y255              	100.00%		H3DQ73              	100.00%
Bootstrap support for H2Y255 as seed ortholog is 100%.
Bootstrap support for H3DQ73 as seed ortholog is 100%.

Group of orthologs #5045. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:11

H2XTM7              	100.00%		H3C0Y2              	100.00%
                    	       		H3CFB3              	11.68%
Bootstrap support for H2XTM7 as seed ortholog is 100%.
Bootstrap support for H3C0Y2 as seed ortholog is 65%.
Alternative seed ortholog is H3DQB4 (11 bits away from this cluster)

Group of orthologs #5046. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:72

F7BNR7              	100.00%		H3DIQ6              	100.00%
                    	       		H3CWH7              	9.36%
Bootstrap support for F7BNR7 as seed ortholog is 100%.
Bootstrap support for H3DIQ6 as seed ortholog is 100%.

Group of orthologs #5047. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:72

H2Y3S3              	100.00%		Q5I4D2              	100.00%
H2Y234              	25.84%		
Bootstrap support for H2Y3S3 as seed ortholog is 100%.
Bootstrap support for Q5I4D2 as seed ortholog is 100%.

Group of orthologs #5048. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:72

F6U3U7              	100.00%		H3BY55              	100.00%
Bootstrap support for F6U3U7 as seed ortholog is 100%.
Bootstrap support for H3BY55 as seed ortholog is 100%.

Group of orthologs #5049. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:72

F6XI02              	100.00%		H3DGZ0              	100.00%
Bootstrap support for F6XI02 as seed ortholog is 100%.
Bootstrap support for H3DGZ0 as seed ortholog is 100%.

Group of orthologs #5050. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:72

H2XSC7              	100.00%		H3D654              	100.00%
Bootstrap support for H2XSC7 as seed ortholog is 100%.
Bootstrap support for H3D654 as seed ortholog is 100%.

Group of orthologs #5051. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 T.nigroviridis:72

H2Y3U2              	100.00%		H3D109              	100.00%
Bootstrap support for H2Y3U2 as seed ortholog is 100%.
Bootstrap support for H3D109 as seed ortholog is 100%.

Group of orthologs #5052. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:71

F6Z4Q2              	100.00%		H3D137              	100.00%
F7ACP0              	53.00%		H3BWS7              	66.93%
                    	       		H3C000              	44.80%
                    	       		H3BWI1              	37.87%
                    	       		H3DLW4              	8.53%
                    	       		H3DQH9              	5.07%
Bootstrap support for F6Z4Q2 as seed ortholog is 100%.
Bootstrap support for H3D137 as seed ortholog is 100%.

Group of orthologs #5053. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:71

F7BCF2              	100.00%		H3CSJ5              	100.00%
                    	       		H3DDI6              	44.04%
                    	       		H3CQ32              	36.25%
                    	       		H3C7L0              	30.68%
Bootstrap support for F7BCF2 as seed ortholog is 100%.
Bootstrap support for H3CSJ5 as seed ortholog is 100%.

Group of orthologs #5054. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 T.nigroviridis:71

F6WQL4              	100.00%		H3CBQ2              	100.00%
                    	       		H3C4W4              	11.96%
Bootstrap support for F6WQL4 as seed ortholog is 98%.
Bootstrap support for H3CBQ2 as seed ortholog is 100%.

Group of orthologs #5055. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:7

F6X3H1              	100.00%		H3CMR8              	100.00%
                    	       		H3CT60              	6.80%
Bootstrap support for F6X3H1 as seed ortholog is 100%.
Bootstrap support for H3CMR8 as seed ortholog is 72%.
Alternative seed ortholog is H3D3B8 (7 bits away from this cluster)

Group of orthologs #5056. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 T.nigroviridis:15

H2XTE8              	100.00%		H3CIF7              	100.00%
                    	       		H3CFW7              	5.78%
Bootstrap support for H2XTE8 as seed ortholog is 82%.
Bootstrap support for H3CIF7 as seed ortholog is 75%.

Group of orthologs #5057. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:71

F6U857              	100.00%		H3BXX8              	100.00%
Bootstrap support for F6U857 as seed ortholog is 100%.
Bootstrap support for H3BXX8 as seed ortholog is 100%.

Group of orthologs #5058. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 T.nigroviridis:71

F6RLM7              	100.00%		H3DCJ0              	100.00%
Bootstrap support for F6RLM7 as seed ortholog is 59%.
Alternative seed ortholog is F6YTE8 (7 bits away from this cluster)
Bootstrap support for H3DCJ0 as seed ortholog is 100%.

Group of orthologs #5059. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:71

F6R508              	100.00%		H3DJZ0              	100.00%
Bootstrap support for F6R508 as seed ortholog is 100%.
Bootstrap support for H3DJZ0 as seed ortholog is 100%.

Group of orthologs #5060. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:71

H2XZW1              	100.00%		H3CQE0              	100.00%
Bootstrap support for H2XZW1 as seed ortholog is 100%.
Bootstrap support for H3CQE0 as seed ortholog is 100%.

Group of orthologs #5061. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 T.nigroviridis:71

H2XU60              	100.00%		H3D396              	100.00%
Bootstrap support for H2XU60 as seed ortholog is 100%.
Bootstrap support for H3D396 as seed ortholog is 100%.

Group of orthologs #5062. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

F6Y8G0              	100.00%		H3CG95              	100.00%
                    	       		H3CKQ5              	23.21%
Bootstrap support for F6Y8G0 as seed ortholog is 100%.
Bootstrap support for H3CG95 as seed ortholog is 100%.

Group of orthologs #5063. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

F6TV42              	100.00%		H3DJX1              	100.00%
                    	       		H3CX22              	27.23%
Bootstrap support for F6TV42 as seed ortholog is 100%.
Bootstrap support for H3DJX1 as seed ortholog is 100%.

Group of orthologs #5064. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:4

H2XMI0              	100.00%		Q4S253              	100.00%
F6UNF1              	8.89%		
Bootstrap support for H2XMI0 as seed ortholog is 77%.
Bootstrap support for Q4S253 as seed ortholog is 42%.
Alternative seed ortholog is H3DLI1 (4 bits away from this cluster)

Group of orthologs #5065. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:11

Q1RLG0              	100.00%		H3D9S6              	100.00%
                    	       		H3CYI6              	40.21%
Bootstrap support for Q1RLG0 as seed ortholog is 100%.
Bootstrap support for H3D9S6 as seed ortholog is 64%.
Alternative seed ortholog is H3D8G7 (11 bits away from this cluster)

Group of orthologs #5066. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

Q4H3Q3              	100.00%		H3DKZ4              	100.00%
                    	       		H3CT77              	22.36%
Bootstrap support for Q4H3Q3 as seed ortholog is 100%.
Bootstrap support for H3DKZ4 as seed ortholog is 100%.

Group of orthologs #5067. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:25

F6Q1U9              	100.00%		H3DJ45              	100.00%
Bootstrap support for F6Q1U9 as seed ortholog is 100%.
Bootstrap support for H3DJ45 as seed ortholog is 74%.
Alternative seed ortholog is H3DPA3 (25 bits away from this cluster)

Group of orthologs #5068. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

H2XV82              	100.00%		H3C3U6              	100.00%
Bootstrap support for H2XV82 as seed ortholog is 100%.
Bootstrap support for H3C3U6 as seed ortholog is 100%.

Group of orthologs #5069. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

F6ZT56              	100.00%		H3DB35              	100.00%
Bootstrap support for F6ZT56 as seed ortholog is 100%.
Bootstrap support for H3DB35 as seed ortholog is 100%.

Group of orthologs #5070. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

F6ZJN0              	100.00%		Q4SWB9              	100.00%
Bootstrap support for F6ZJN0 as seed ortholog is 100%.
Bootstrap support for Q4SWB9 as seed ortholog is 100%.

Group of orthologs #5071. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

H2XWA1              	100.00%		H3DAN1              	100.00%
Bootstrap support for H2XWA1 as seed ortholog is 100%.
Bootstrap support for H3DAN1 as seed ortholog is 100%.

Group of orthologs #5072. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 T.nigroviridis:70

H2XU83              	100.00%		Q4T504              	100.00%
Bootstrap support for H2XU83 as seed ortholog is 100%.
Bootstrap support for Q4T504 as seed ortholog is 100%.

Group of orthologs #5073. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 T.nigroviridis:69

F6R5R8              	100.00%		Q4RRT2              	100.00%
                    	       		Q4S7M5              	71.05%
                    	       		Q4T157              	67.76%
                    	       		H3CT61              	47.70%
                    	       		Q4SFF3              	40.79%
Bootstrap support for F6R5R8 as seed ortholog is 73%.
Alternative seed ortholog is H2XSW5 (17 bits away from this cluster)
Bootstrap support for Q4RRT2 as seed ortholog is 100%.

Group of orthologs #5074. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 T.nigroviridis:69

F6T9N5              	100.00%		H3CWT8              	100.00%
Bootstrap support for F6T9N5 as seed ortholog is 53%.
Alternative seed ortholog is F7B860 (4 bits away from this cluster)
Bootstrap support for H3CWT8 as seed ortholog is 100%.

Group of orthologs #5075. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 T.nigroviridis:0

H2XLE9              	100.00%		H3CMJ0              	100.00%
Bootstrap support for H2XLE9 as seed ortholog is 100%.
Bootstrap support for H3CMJ0 as seed ortholog is 49%.
Alternative seed ortholog is H3CDW9 (0 bits away from this cluster)

Group of orthologs #5076. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 T.nigroviridis:69

F6ZR96              	100.00%		H3DI54              	100.00%
Bootstrap support for F6ZR96 as seed ortholog is 100%.
Bootstrap support for H3DI54 as seed ortholog is 100%.

Group of orthologs #5077. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 T.nigroviridis:69

F6YRB7              	100.00%		Q4RLN8              	100.00%
Bootstrap support for F6YRB7 as seed ortholog is 100%.
Bootstrap support for Q4RLN8 as seed ortholog is 100%.

Group of orthologs #5078. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 T.nigroviridis:68

F6QL27              	100.00%		H3CGQ8              	100.00%
F6Y8B5              	8.12%		H3C089              	36.63%
F6R3R2              	8.12%		H3BXB2              	30.80%
F6U1C0              	5.23%		H3CZT7              	6.46%
Bootstrap support for F6QL27 as seed ortholog is 100%.
Bootstrap support for H3CGQ8 as seed ortholog is 100%.

Group of orthologs #5079. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 T.nigroviridis:68

H2XUD9              	100.00%		H3BZR3              	100.00%
                    	       		H3CW88              	48.37%
Bootstrap support for H2XUD9 as seed ortholog is 100%.
Bootstrap support for H3BZR3 as seed ortholog is 100%.

Group of orthologs #5080. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 T.nigroviridis:68

F6SAH1              	100.00%		H3D9V8              	100.00%
Bootstrap support for F6SAH1 as seed ortholog is 100%.
Bootstrap support for H3D9V8 as seed ortholog is 100%.

Group of orthologs #5081. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 T.nigroviridis:68

H2XU25              	100.00%		H3CJK0              	100.00%
Bootstrap support for H2XU25 as seed ortholog is 100%.
Bootstrap support for H3CJK0 as seed ortholog is 100%.

Group of orthologs #5082. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 T.nigroviridis:68

F6UZ03              	100.00%		H3DQY7              	100.00%
Bootstrap support for F6UZ03 as seed ortholog is 100%.
Bootstrap support for H3DQY7 as seed ortholog is 100%.

Group of orthologs #5083. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 T.nigroviridis:68

H2Y0I8              	100.00%		Q4T8R0              	100.00%
Bootstrap support for H2Y0I8 as seed ortholog is 100%.
Bootstrap support for Q4T8R0 as seed ortholog is 100%.

Group of orthologs #5084. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6ZJ69              	100.00%		H3CIL3              	100.00%
                    	       		H3CD83              	30.48%
                    	       		H3D968              	21.14%
Bootstrap support for F6ZJ69 as seed ortholog is 100%.
Bootstrap support for H3CIL3 as seed ortholog is 100%.

Group of orthologs #5085. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

H2XYX0              	100.00%		H3D1N1              	100.00%
                    	       		H3DBS4              	40.61%
Bootstrap support for H2XYX0 as seed ortholog is 100%.
Bootstrap support for H3D1N1 as seed ortholog is 100%.

Group of orthologs #5086. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6TNV5              	100.00%		H3CJH7              	100.00%
Bootstrap support for F6TNV5 as seed ortholog is 100%.
Bootstrap support for H3CJH7 as seed ortholog is 100%.

Group of orthologs #5087. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6Z4Z6              	100.00%		H3C859              	100.00%
Bootstrap support for F6Z4Z6 as seed ortholog is 100%.
Bootstrap support for H3C859 as seed ortholog is 100%.

Group of orthologs #5088. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6SWJ9              	100.00%		H3DEA2              	100.00%
Bootstrap support for F6SWJ9 as seed ortholog is 100%.
Bootstrap support for H3DEA2 as seed ortholog is 100%.

Group of orthologs #5089. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6YQ38              	100.00%		H3D415              	100.00%
Bootstrap support for F6YQ38 as seed ortholog is 100%.
Bootstrap support for H3D415 as seed ortholog is 100%.

Group of orthologs #5090. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

H2XKV0              	100.00%		H3CUX6              	100.00%
Bootstrap support for H2XKV0 as seed ortholog is 100%.
Bootstrap support for H3CUX6 as seed ortholog is 100%.

Group of orthologs #5091. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

F6ZR87              	100.00%		H3DAM5              	100.00%
Bootstrap support for F6ZR87 as seed ortholog is 100%.
Bootstrap support for H3DAM5 as seed ortholog is 100%.

Group of orthologs #5092. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 T.nigroviridis:6

F6VM66              	100.00%		Q4SWK5              	100.00%
Bootstrap support for F6VM66 as seed ortholog is 60%.
Alternative seed ortholog is Q4H3C8 (7 bits away from this cluster)
Bootstrap support for Q4SWK5 as seed ortholog is 33%.
Alternative seed ortholog is Q4RIZ1 (6 bits away from this cluster)

Group of orthologs #5093. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 T.nigroviridis:67

H2XZ15              	100.00%		H3D4X2              	100.00%
Bootstrap support for H2XZ15 as seed ortholog is 55%.
Alternative seed ortholog is F6T9V7 (4 bits away from this cluster)
Bootstrap support for H3D4X2 as seed ortholog is 100%.

Group of orthologs #5094. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

H2XMT5              	100.00%		Q4TGA8              	100.00%
Bootstrap support for H2XMT5 as seed ortholog is 100%.
Bootstrap support for Q4TGA8 as seed ortholog is 100%.

Group of orthologs #5095. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

H2XVU9              	100.00%		Q4S3C1              	100.00%
Bootstrap support for H2XVU9 as seed ortholog is 100%.
Bootstrap support for Q4S3C1 as seed ortholog is 100%.

Group of orthologs #5096. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

H2Y196              	100.00%		Q4S9L2              	100.00%
Bootstrap support for H2Y196 as seed ortholog is 100%.
Bootstrap support for Q4S9L2 as seed ortholog is 100%.

Group of orthologs #5097. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 T.nigroviridis:67

H2Y286              	100.00%		Q4RZ17              	100.00%
Bootstrap support for H2Y286 as seed ortholog is 100%.
Bootstrap support for Q4RZ17 as seed ortholog is 100%.

Group of orthologs #5098. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 T.nigroviridis:17

F6STM2              	100.00%		H3BYZ6              	100.00%
F6VHD2              	89.18%		H3C712              	68.06%
F6VE25              	65.67%		Q4RZS6              	17.11%
F6RAF6              	46.27%		H3D482              	15.21%
                    	       		H3D4A0              	9.51%
Bootstrap support for F6STM2 as seed ortholog is 79%.
Bootstrap support for H3BYZ6 as seed ortholog is 70%.
Alternative seed ortholog is H3CVE0 (17 bits away from this cluster)

Group of orthologs #5099. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:3

F6XKF8              	100.00%		H3C7A3              	100.00%
                    	       		H3DHT5              	37.80%
                    	       		H3CZR4              	33.74%
                    	       		H3BWC6              	32.32%
                    	       		H3C7B0              	24.59%
                    	       		H3C7C2              	14.84%
                    	       		H3C7A7              	11.18%
                    	       		H3CXK4              	5.28%
Bootstrap support for F6XKF8 as seed ortholog is 100%.
Bootstrap support for H3C7A3 as seed ortholog is 62%.
Alternative seed ortholog is H3C325 (3 bits away from this cluster)

Group of orthologs #5100. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

H2XUH5              	100.00%		H3DP57              	100.00%
F6PJR0              	8.73%		
F6XA77              	6.61%		
F6UAV6              	5.82%		
Bootstrap support for H2XUH5 as seed ortholog is 100%.
Bootstrap support for H3DP57 as seed ortholog is 100%.

Group of orthologs #5101. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

H2XUT4              	100.00%		Q4S9M5              	100.00%
                    	       		H3CEX1              	16.73%
Bootstrap support for H2XUT4 as seed ortholog is 100%.
Bootstrap support for Q4S9M5 as seed ortholog is 100%.

Group of orthologs #5102. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

F6QIW3              	100.00%		H3BXF0              	100.00%
Bootstrap support for F6QIW3 as seed ortholog is 100%.
Bootstrap support for H3BXF0 as seed ortholog is 100%.

Group of orthologs #5103. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 T.nigroviridis:10

F6QCV4              	100.00%		H3C5R8              	100.00%
Bootstrap support for F6QCV4 as seed ortholog is 70%.
Alternative seed ortholog is H2Y210 (18 bits away from this cluster)
Bootstrap support for H3C5R8 as seed ortholog is 61%.
Alternative seed ortholog is H3CIA8 (10 bits away from this cluster)

Group of orthologs #5104. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

F6PNZ0              	100.00%		H3CZU0              	100.00%
Bootstrap support for F6PNZ0 as seed ortholog is 100%.
Bootstrap support for H3CZU0 as seed ortholog is 100%.

Group of orthologs #5105. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

F6WHK6              	100.00%		H3CV45              	100.00%
Bootstrap support for F6WHK6 as seed ortholog is 100%.
Bootstrap support for H3CV45 as seed ortholog is 100%.

Group of orthologs #5106. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

F6TY64              	100.00%		H3DGN4              	100.00%
Bootstrap support for F6TY64 as seed ortholog is 100%.
Bootstrap support for H3DGN4 as seed ortholog is 100%.

Group of orthologs #5107. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

F7AAL2              	100.00%		H3D2N4              	100.00%
Bootstrap support for F7AAL2 as seed ortholog is 100%.
Bootstrap support for H3D2N4 as seed ortholog is 100%.

Group of orthologs #5108. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:12

F6XKW6              	100.00%		H3DF27              	100.00%
Bootstrap support for F6XKW6 as seed ortholog is 100%.
Bootstrap support for H3DF27 as seed ortholog is 50%.
Alternative seed ortholog is H3DBZ2 (12 bits away from this cluster)

Group of orthologs #5109. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

H2XQ44              	100.00%		H3CSX2              	100.00%
Bootstrap support for H2XQ44 as seed ortholog is 100%.
Bootstrap support for H3CSX2 as seed ortholog is 100%.

Group of orthologs #5110. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

H2XUX1              	100.00%		H3CQJ6              	100.00%
Bootstrap support for H2XUX1 as seed ortholog is 100%.
Bootstrap support for H3CQJ6 as seed ortholog is 100%.

Group of orthologs #5111. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

H2XP82              	100.00%		H3DBA2              	100.00%
Bootstrap support for H2XP82 as seed ortholog is 100%.
Bootstrap support for H3DBA2 as seed ortholog is 100%.

Group of orthologs #5112. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 T.nigroviridis:66

F7BIT3              	100.00%		H3DPF4              	100.00%
Bootstrap support for F7BIT3 as seed ortholog is 100%.
Bootstrap support for H3DPF4 as seed ortholog is 100%.

Group of orthologs #5113. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:13

F6XHU3              	100.00%		Q4RWE9              	100.00%
                    	       		H3CHI2              	37.84%
                    	       		H3CQQ9              	37.45%
Bootstrap support for F6XHU3 as seed ortholog is 100%.
Bootstrap support for Q4RWE9 as seed ortholog is 81%.

Group of orthologs #5114. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:65

H2XUR3              	100.00%		H3C528              	100.00%
                    	       		H3DHD8              	69.17%
Bootstrap support for H2XUR3 as seed ortholog is 100%.
Bootstrap support for H3C528 as seed ortholog is 100%.

Group of orthologs #5115. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:65

F6RZL7              	100.00%		H3CYT1              	100.00%
Bootstrap support for F6RZL7 as seed ortholog is 100%.
Bootstrap support for H3CYT1 as seed ortholog is 100%.

Group of orthologs #5116. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:65

F6TDV1              	100.00%		H3CV48              	100.00%
Bootstrap support for F6TDV1 as seed ortholog is 100%.
Bootstrap support for H3CV48 as seed ortholog is 100%.

Group of orthologs #5117. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:65

F6Q119              	100.00%		Q90W04              	100.00%
Bootstrap support for F6Q119 as seed ortholog is 100%.
Bootstrap support for Q90W04 as seed ortholog is 100%.

Group of orthologs #5118. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 T.nigroviridis:65

F6X7P9              	100.00%		H3DI23              	100.00%
Bootstrap support for F6X7P9 as seed ortholog is 100%.
Bootstrap support for H3DI23 as seed ortholog is 100%.

Group of orthologs #5119. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 T.nigroviridis:64

H2XL17              	100.00%		H3CFB1              	100.00%
                    	       		H3CH18              	33.19%
                    	       		H3DCC7              	17.45%
Bootstrap support for H2XL17 as seed ortholog is 100%.
Bootstrap support for H3CFB1 as seed ortholog is 100%.

Group of orthologs #5120. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 T.nigroviridis:64

F6ZKU9              	100.00%		Q5QSA7              	100.00%
F7A367              	51.43%		
Bootstrap support for F6ZKU9 as seed ortholog is 100%.
Bootstrap support for Q5QSA7 as seed ortholog is 100%.

Group of orthologs #5121. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 T.nigroviridis:64

F6W685              	100.00%		H3CP75              	100.00%
Bootstrap support for F6W685 as seed ortholog is 100%.
Bootstrap support for H3CP75 as seed ortholog is 100%.

Group of orthologs #5122. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 T.nigroviridis:64

H2XX24              	100.00%		H3C518              	100.00%
Bootstrap support for H2XX24 as seed ortholog is 100%.
Bootstrap support for H3C518 as seed ortholog is 100%.

Group of orthologs #5123. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 T.nigroviridis:64

H2XR11              	100.00%		H3CGP6              	100.00%
Bootstrap support for H2XR11 as seed ortholog is 100%.
Bootstrap support for H3CGP6 as seed ortholog is 100%.

Group of orthologs #5124. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 T.nigroviridis:64

H2XKU1              	100.00%		H3D5X2              	100.00%
Bootstrap support for H2XKU1 as seed ortholog is 100%.
Bootstrap support for H3D5X2 as seed ortholog is 100%.

Group of orthologs #5125. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 T.nigroviridis:63

F6XY19              	100.00%		H3C181              	100.00%
Bootstrap support for F6XY19 as seed ortholog is 100%.
Bootstrap support for H3C181 as seed ortholog is 100%.

Group of orthologs #5126. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:8

H2XV20              	100.00%		H3C4J6              	100.00%
F6X3P4              	12.77%		
F6Z8A3              	11.85%		
H2XZ11              	8.51%		
F6VXC2              	8.21%		
F6V7D4              	7.29%		
H2Y1P7              	6.08%		
F6V7B2              	5.17%		
Bootstrap support for H2XV20 as seed ortholog is 54%.
Alternative seed ortholog is F6QML6 (3 bits away from this cluster)
Bootstrap support for H3C4J6 as seed ortholog is 40%.
Alternative seed ortholog is H3C8S8 (8 bits away from this cluster)

Group of orthologs #5127. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

F6UKH7              	100.00%		H3BX52              	100.00%
                    	       		H3CJC5              	46.60%
                    	       		H3CSP5              	28.80%
Bootstrap support for F6UKH7 as seed ortholog is 100%.
Bootstrap support for H3BX52 as seed ortholog is 100%.

Group of orthologs #5128. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

F6RNG3              	100.00%		H3DQU9              	100.00%
F6QP88              	37.77%		
Bootstrap support for F6RNG3 as seed ortholog is 100%.
Bootstrap support for H3DQU9 as seed ortholog is 100%.

Group of orthologs #5129. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

F6RN20              	100.00%		H3CZB5              	100.00%
Bootstrap support for F6RN20 as seed ortholog is 100%.
Bootstrap support for H3CZB5 as seed ortholog is 100%.

Group of orthologs #5130. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

F7AM14              	100.00%		H3CDR3              	100.00%
Bootstrap support for F7AM14 as seed ortholog is 100%.
Bootstrap support for H3CDR3 as seed ortholog is 100%.

Group of orthologs #5131. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

H2XV19              	100.00%		H3CH83              	100.00%
Bootstrap support for H2XV19 as seed ortholog is 100%.
Bootstrap support for H3CH83 as seed ortholog is 100%.

Group of orthologs #5132. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

F6ZPP4              	100.00%		H3DAL9              	100.00%
Bootstrap support for F6ZPP4 as seed ortholog is 100%.
Bootstrap support for H3DAL9 as seed ortholog is 100%.

Group of orthologs #5133. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

F7B1S6              	100.00%		H3DFB8              	100.00%
Bootstrap support for F7B1S6 as seed ortholog is 100%.
Bootstrap support for H3DFB8 as seed ortholog is 100%.

Group of orthologs #5134. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

H2XKM1              	100.00%		Q4T291              	100.00%
Bootstrap support for H2XKM1 as seed ortholog is 100%.
Bootstrap support for Q4T291 as seed ortholog is 100%.

Group of orthologs #5135. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 T.nigroviridis:62

H2XRG9              	100.00%		H3DNH2              	100.00%
Bootstrap support for H2XRG9 as seed ortholog is 100%.
Bootstrap support for H3DNH2 as seed ortholog is 100%.

Group of orthologs #5136. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

F6ZF81              	100.00%		Q4RTR3              	100.00%
                    	       		H3CT56              	34.12%
                    	       		H3CQR2              	27.60%
                    	       		Q4RRT4              	24.04%
Bootstrap support for F6ZF81 as seed ortholog is 100%.
Bootstrap support for Q4RTR3 as seed ortholog is 100%.

Group of orthologs #5137. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

F6Y4T2              	100.00%		H3CDL4              	100.00%
H2Y1N8              	6.34%		H3D3G0              	33.39%
Bootstrap support for F6Y4T2 as seed ortholog is 100%.
Bootstrap support for H3CDL4 as seed ortholog is 100%.

Group of orthologs #5138. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

F6QNI1              	100.00%		H3DB23              	100.00%
                    	       		H3CQ49              	22.22%
Bootstrap support for F6QNI1 as seed ortholog is 100%.
Bootstrap support for H3DB23 as seed ortholog is 100%.

Group of orthologs #5139. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

Q4H2Z7              	100.00%		H3CJ55              	100.00%
                    	       		H3CQB2              	14.69%
Bootstrap support for Q4H2Z7 as seed ortholog is 100%.
Bootstrap support for H3CJ55 as seed ortholog is 100%.

Group of orthologs #5140. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

F6PJX9              	100.00%		H3C1V7              	100.00%
Bootstrap support for F6PJX9 as seed ortholog is 100%.
Bootstrap support for H3C1V7 as seed ortholog is 100%.

Group of orthologs #5141. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

F6YWI8              	100.00%		H3C3E6              	100.00%
Bootstrap support for F6YWI8 as seed ortholog is 100%.
Bootstrap support for H3C3E6 as seed ortholog is 100%.

Group of orthologs #5142. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

H2Y0F9              	100.00%		H3CWL8              	100.00%
Bootstrap support for H2Y0F9 as seed ortholog is 100%.
Bootstrap support for H3CWL8 as seed ortholog is 100%.

Group of orthologs #5143. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 T.nigroviridis:61

H2XJH9              	100.00%		H3DLC8              	100.00%
Bootstrap support for H2XJH9 as seed ortholog is 100%.
Bootstrap support for H3DLC8 as seed ortholog is 100%.

Group of orthologs #5144. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:60

H2XQR3              	100.00%		H3DPS9              	100.00%
                    	       		H3CXB8              	64.63%
                    	       		Q4SCQ2              	63.41%
                    	       		H3DGX1              	45.12%
Bootstrap support for H2XQR3 as seed ortholog is 100%.
Bootstrap support for H3DPS9 as seed ortholog is 100%.

Group of orthologs #5145. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:60

F6SN40              	100.00%		H3DCD4              	100.00%
                    	       		H3DNI2              	18.69%
                    	       		H3D568              	10.21%
Bootstrap support for F6SN40 as seed ortholog is 100%.
Bootstrap support for H3DCD4 as seed ortholog is 100%.

Group of orthologs #5146. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:60

F6XQ94              	100.00%		H3CHQ9              	100.00%
F6X432              	43.14%		
Bootstrap support for F6XQ94 as seed ortholog is 100%.
Bootstrap support for H3CHQ9 as seed ortholog is 100%.

Group of orthologs #5147. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 T.nigroviridis:60

H2Y0B5              	100.00%		H3C745              	100.00%
Bootstrap support for H2Y0B5 as seed ortholog is 100%.
Bootstrap support for H3C745 as seed ortholog is 100%.

Group of orthologs #5148. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:59

F6SWF0              	100.00%		H3D581              	100.00%
                    	       		H3DFW7              	13.12%
                    	       		H3DIT5              	5.32%
Bootstrap support for F6SWF0 as seed ortholog is 100%.
Bootstrap support for H3D581 as seed ortholog is 100%.

Group of orthologs #5149. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:5

H2XXA5              	100.00%		H3C7K5              	100.00%
F6RH28              	19.81%		
Bootstrap support for H2XXA5 as seed ortholog is 100%.
Bootstrap support for H3C7K5 as seed ortholog is 41%.
Alternative seed ortholog is H3C6Z9 (5 bits away from this cluster)

Group of orthologs #5150. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:59

H2XZT3              	100.00%		H3BYJ2              	100.00%
Bootstrap support for H2XZT3 as seed ortholog is 100%.
Bootstrap support for H3BYJ2 as seed ortholog is 100%.

Group of orthologs #5151. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 T.nigroviridis:59

H2XJV8              	100.00%		Q4T1M9              	100.00%
Bootstrap support for H2XJV8 as seed ortholog is 100%.
Bootstrap support for Q4T1M9 as seed ortholog is 100%.

Group of orthologs #5152. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:58

H2XXA0              	100.00%		H3BXD4              	100.00%
                    	       		H3DNV3              	39.20%
Bootstrap support for H2XXA0 as seed ortholog is 100%.
Bootstrap support for H3BXD4 as seed ortholog is 100%.

Group of orthologs #5153. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:58

F6QDF2              	100.00%		H3CLW5              	100.00%
Bootstrap support for F6QDF2 as seed ortholog is 100%.
Bootstrap support for H3CLW5 as seed ortholog is 100%.

Group of orthologs #5154. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 T.nigroviridis:58

F6SBN1              	100.00%		H3CK61              	100.00%
Bootstrap support for F6SBN1 as seed ortholog is 55%.
Alternative seed ortholog is F6VT21 (6 bits away from this cluster)
Bootstrap support for H3CK61 as seed ortholog is 100%.

Group of orthologs #5155. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:58

H2XWV7              	100.00%		H3C6A8              	100.00%
Bootstrap support for H2XWV7 as seed ortholog is 100%.
Bootstrap support for H3C6A8 as seed ortholog is 100%.

Group of orthologs #5156. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:58

H2Y0S8              	100.00%		H3CPZ0              	100.00%
Bootstrap support for H2Y0S8 as seed ortholog is 100%.
Bootstrap support for H3CPZ0 as seed ortholog is 100%.

Group of orthologs #5157. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 T.nigroviridis:58

H2XN70              	100.00%		H3DLB0              	100.00%
Bootstrap support for H2XN70 as seed ortholog is 100%.
Bootstrap support for H3DLB0 as seed ortholog is 100%.

Group of orthologs #5158. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:57

F6UKJ4              	100.00%		H3CNX5              	100.00%
H2XQY9              	33.00%		Q4RYE8              	28.07%
F6XSZ3              	14.48%		H3CLA3              	15.09%
                    	       		H3CH75              	9.12%
Bootstrap support for F6UKJ4 as seed ortholog is 100%.
Bootstrap support for H3CNX5 as seed ortholog is 100%.

Group of orthologs #5159. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:57

F6YWN2              	100.00%		H3BYJ5              	100.00%
Bootstrap support for F6YWN2 as seed ortholog is 100%.
Bootstrap support for H3BYJ5 as seed ortholog is 100%.

Group of orthologs #5160. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:57

F7BKY1              	100.00%		H3CFE3              	100.00%
Bootstrap support for F7BKY1 as seed ortholog is 100%.
Bootstrap support for H3CFE3 as seed ortholog is 100%.

Group of orthologs #5161. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:57

F6R0Z4              	100.00%		H3DJN4              	100.00%
Bootstrap support for F6R0Z4 as seed ortholog is 100%.
Bootstrap support for H3DJN4 as seed ortholog is 100%.

Group of orthologs #5162. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:57

H2Y276              	100.00%		H3BYQ3              	100.00%
Bootstrap support for H2Y276 as seed ortholog is 100%.
Bootstrap support for H3BYQ3 as seed ortholog is 100%.

Group of orthologs #5163. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 T.nigroviridis:57

F6YTN6              	100.00%		H3DPI6              	100.00%
Bootstrap support for F6YTN6 as seed ortholog is 100%.
Bootstrap support for H3DPI6 as seed ortholog is 100%.

Group of orthologs #5164. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

F6Q2R9              	100.00%		H3BX62              	100.00%
                    	       		H3C383              	45.42%
                    	       		Q4S9S3              	45.05%
                    	       		H3DAE4              	44.32%
                    	       		H3D1V6              	43.96%
                    	       		H3D1W6              	43.59%
                    	       		H3D1W5              	42.86%
                    	       		H3CIJ5              	39.56%
                    	       		H3D1V7              	36.26%
                    	       		H3C0S3              	35.90%
                    	       		Q4RU02              	32.97%
                    	       		Q4S9R8              	32.60%
                    	       		H3D1W2              	32.23%
                    	       		H3C1E7              	31.50%
                    	       		H3D1V8              	31.14%
                    	       		Q4S9R4              	31.14%
                    	       		Q4S9R7              	31.14%
                    	       		H3D1W3              	30.77%
                    	       		H3DAE3              	30.04%
                    	       		Q4S9R9              	28.94%
                    	       		H3D7P9              	24.54%
                    	       		H3CGN9              	17.58%
                    	       		H3D1M2              	14.65%
                    	       		H3CFM0              	12.09%
                    	       		H3DI35              	9.52%
                    	       		Q4S1U6              	9.16%
                    	       		H3D6G2              	6.59%
                    	       		H3DFC6              	6.59%
                    	       		H3D7T8              	6.23%
                    	       		H3D6G1              	6.23%
Bootstrap support for F6Q2R9 as seed ortholog is 100%.
Bootstrap support for H3BX62 as seed ortholog is 100%.

Group of orthologs #5165. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

F6ZNY7              	100.00%		H3CED5              	100.00%
H2XZ09              	17.92%		
F6VWC3              	16.72%		
H2Y2W8              	16.11%		
F6YU47              	6.02%		
Bootstrap support for F6ZNY7 as seed ortholog is 100%.
Bootstrap support for H3CED5 as seed ortholog is 100%.

Group of orthologs #5166. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

F7BJI5              	100.00%		H3DQX6              	100.00%
                    	       		H3DQC9              	72.66%
                    	       		H3CFV8              	70.50%
                    	       		H3C1D6              	20.86%
Bootstrap support for F7BJI5 as seed ortholog is 100%.
Bootstrap support for H3DQX6 as seed ortholog is 100%.

Group of orthologs #5167. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

H2XTI8              	100.00%		H3DA52              	100.00%
                    	       		Q4RTF0              	100.00%
Bootstrap support for H2XTI8 as seed ortholog is 100%.
Bootstrap support for H3DA52 as seed ortholog is 100%.
Bootstrap support for Q4RTF0 as seed ortholog is 100%.

Group of orthologs #5168. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

H2XYC4              	100.00%		H3BYZ2              	100.00%
Bootstrap support for H2XYC4 as seed ortholog is 100%.
Bootstrap support for H3BYZ2 as seed ortholog is 100%.

Group of orthologs #5169. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

H2XQN0              	100.00%		Q4SJ83              	100.00%
Bootstrap support for H2XQN0 as seed ortholog is 100%.
Bootstrap support for Q4SJ83 as seed ortholog is 100%.

Group of orthologs #5170. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 T.nigroviridis:56

Q8HIN1              	100.00%		Q4JQI0              	100.00%
Bootstrap support for Q8HIN1 as seed ortholog is 100%.
Bootstrap support for Q4JQI0 as seed ortholog is 100%.

Group of orthologs #5171. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:0

F7ACL3              	100.00%		H3CK84              	100.00%
H2XTA3              	19.11%		
F6S3Z4              	14.97%		
F6RVQ6              	13.69%		
F6VSN5              	11.46%		
F6SIM6              	10.83%		
F6VXG4              	9.55%		
H2XPW3              	9.55%		
F6S6H2              	5.73%		
F6VGQ2              	5.41%		
F6WDU3              	5.41%		
Bootstrap support for F7ACL3 as seed ortholog is 100%.
Bootstrap support for H3CK84 as seed ortholog is 45%.
Alternative seed ortholog is H3C8Q1 (0 bits away from this cluster)

Group of orthologs #5172. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:55

H2XXQ4              	100.00%		Q4TFQ0              	100.00%
H2XUH9              	11.20%		
Bootstrap support for H2XXQ4 as seed ortholog is 100%.
Bootstrap support for Q4TFQ0 as seed ortholog is 100%.

Group of orthologs #5173. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:55

F6X0X7              	100.00%		H3DAE8              	100.00%
Bootstrap support for F6X0X7 as seed ortholog is 100%.
Bootstrap support for H3DAE8 as seed ortholog is 100%.

Group of orthologs #5174. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:55

F6XE89              	100.00%		H3DF33              	100.00%
Bootstrap support for F6XE89 as seed ortholog is 100%.
Bootstrap support for H3DF33 as seed ortholog is 100%.

Group of orthologs #5175. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:55

H2XWB7              	100.00%		H3CYE5              	100.00%
Bootstrap support for H2XWB7 as seed ortholog is 100%.
Bootstrap support for H3CYE5 as seed ortholog is 100%.

Group of orthologs #5176. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 T.nigroviridis:55

H2Y0F2              	100.00%		H3DEW6              	100.00%
Bootstrap support for H2Y0F2 as seed ortholog is 100%.
Bootstrap support for H3DEW6 as seed ortholog is 100%.

Group of orthologs #5177. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:54

H2XWK3              	100.00%		Q4SYA7              	100.00%
                    	       		H3C4V4              	49.57%
                    	       		H3CZD1              	47.56%
                    	       		H3DDR8              	46.13%
                    	       		H3DMT3              	12.32%
                    	       		H3CVG1              	12.03%
                    	       		H3CP48              	11.46%
                    	       		H3D8A4              	10.89%
                    	       		H3CBX9              	9.74%
                    	       		H3DF37              	9.17%
Bootstrap support for H2XWK3 as seed ortholog is 100%.
Bootstrap support for Q4SYA7 as seed ortholog is 100%.

Group of orthologs #5178. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:54

F6ZL37              	100.00%		H3CKP8              	100.00%
                    	       		H3DN10              	36.16%
Bootstrap support for F6ZL37 as seed ortholog is 100%.
Bootstrap support for H3CKP8 as seed ortholog is 100%.

Group of orthologs #5179. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:54

H2XXW5              	100.00%		Q4SSJ9              	100.00%
                    	       		Q4RMR9              	51.06%
Bootstrap support for H2XXW5 as seed ortholog is 100%.
Bootstrap support for Q4SSJ9 as seed ortholog is 100%.

Group of orthologs #5180. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:54

F6ZZW3              	100.00%		H3CIN4              	100.00%
Bootstrap support for F6ZZW3 as seed ortholog is 100%.
Bootstrap support for H3CIN4 as seed ortholog is 100%.

Group of orthologs #5181. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 T.nigroviridis:54

F6XJ64              	100.00%		Q4RZU7              	100.00%
Bootstrap support for F6XJ64 as seed ortholog is 100%.
Bootstrap support for Q4RZU7 as seed ortholog is 100%.

Group of orthologs #5182. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:53

H2XWU8              	100.00%		Q4S546              	100.00%
F6ZGB0              	9.95%		
Bootstrap support for H2XWU8 as seed ortholog is 100%.
Bootstrap support for Q4S546 as seed ortholog is 100%.

Group of orthologs #5183. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 T.nigroviridis:53

H2XQT1              	100.00%		H3CCK1              	100.00%
Bootstrap support for H2XQT1 as seed ortholog is 100%.
Bootstrap support for H3CCK1 as seed ortholog is 100%.

Group of orthologs #5184. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

F6VRM1              	100.00%		H3C8S4              	100.00%
Bootstrap support for F6VRM1 as seed ortholog is 100%.
Bootstrap support for H3C8S4 as seed ortholog is 100%.

Group of orthologs #5185. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

F6TIH6              	100.00%		H3DCG4              	100.00%
Bootstrap support for F6TIH6 as seed ortholog is 100%.
Bootstrap support for H3DCG4 as seed ortholog is 100%.

Group of orthologs #5186. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

F6UHK4              	100.00%		Q4S497              	100.00%
Bootstrap support for F6UHK4 as seed ortholog is 100%.
Bootstrap support for Q4S497 as seed ortholog is 100%.

Group of orthologs #5187. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

H2XRM7              	100.00%		H3DB27              	100.00%
Bootstrap support for H2XRM7 as seed ortholog is 100%.
Bootstrap support for H3DB27 as seed ortholog is 100%.

Group of orthologs #5188. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

F7BBI8              	100.00%		H3DN24              	100.00%
Bootstrap support for F7BBI8 as seed ortholog is 100%.
Bootstrap support for H3DN24 as seed ortholog is 100%.

Group of orthologs #5189. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

H2XVS6              	100.00%		H3D649              	100.00%
Bootstrap support for H2XVS6 as seed ortholog is 100%.
Bootstrap support for H3D649 as seed ortholog is 100%.

Group of orthologs #5190. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 T.nigroviridis:52

H2XYL9              	100.00%		H3D7E5              	100.00%
Bootstrap support for H2XYL9 as seed ortholog is 100%.
Bootstrap support for H3D7E5 as seed ortholog is 100%.

Group of orthologs #5191. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:51

F6S0I4              	100.00%		H3CGS4              	100.00%
F6VMK4              	10.41%		
Bootstrap support for F6S0I4 as seed ortholog is 100%.
Bootstrap support for H3CGS4 as seed ortholog is 100%.

Group of orthologs #5192. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:51

H2XX02              	100.00%		H3CUC1              	100.00%
                    	       		H3CF14              	33.94%
Bootstrap support for H2XX02 as seed ortholog is 100%.
Bootstrap support for H3CUC1 as seed ortholog is 100%.

Group of orthologs #5193. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:51

F6S8G5              	100.00%		H3C269              	100.00%
Bootstrap support for F6S8G5 as seed ortholog is 100%.
Bootstrap support for H3C269 as seed ortholog is 100%.

Group of orthologs #5194. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:51

F6U121              	100.00%		H3CH40              	100.00%
Bootstrap support for F6U121 as seed ortholog is 100%.
Bootstrap support for H3CH40 as seed ortholog is 100%.

Group of orthologs #5195. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 T.nigroviridis:51

F7BNZ0              	100.00%		H3C5N1              	100.00%
Bootstrap support for F7BNZ0 as seed ortholog is 100%.
Bootstrap support for H3C5N1 as seed ortholog is 100%.

Group of orthologs #5196. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 T.nigroviridis:51

F6S720              	100.00%		H3DE03              	100.00%
Bootstrap support for F6S720 as seed ortholog is 65%.
Alternative seed ortholog is Q6L5M4 (11 bits away from this cluster)
Bootstrap support for H3DE03 as seed ortholog is 100%.

Group of orthologs #5197. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

H2XYR5              	100.00%		H3CYA1              	100.00%
                    	       		H3D4K3              	8.54%
                    	       		H3DFX6              	6.03%
                    	       		Q4RKE8              	5.53%
                    	       		H3BXP8              	5.53%
                    	       		Q4RHW9              	5.03%
Bootstrap support for H2XYR5 as seed ortholog is 100%.
Bootstrap support for H3CYA1 as seed ortholog is 100%.

Group of orthologs #5198. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

H2XP47              	100.00%		H3D978              	100.00%
                    	       		Q4RU54              	100.00%
Bootstrap support for H2XP47 as seed ortholog is 100%.
Bootstrap support for H3D978 as seed ortholog is 100%.
Bootstrap support for Q4RU54 as seed ortholog is 100%.

Group of orthologs #5199. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

H2XVH7              	100.00%		H3D1V1              	100.00%
H2XXG2              	13.23%		
Bootstrap support for H2XVH7 as seed ortholog is 100%.
Bootstrap support for H3D1V1 as seed ortholog is 100%.

Group of orthologs #5200. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

H2XRE4              	100.00%		H3DQ86              	100.00%
                    	       		H3DQ99              	47.76%
Bootstrap support for H2XRE4 as seed ortholog is 100%.
Bootstrap support for H3DQ86 as seed ortholog is 100%.

Group of orthologs #5201. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:6

F6YWM5              	100.00%		H3C231              	100.00%
Bootstrap support for F6YWM5 as seed ortholog is 100%.
Bootstrap support for H3C231 as seed ortholog is 61%.
Alternative seed ortholog is Q4T7Q9 (6 bits away from this cluster)

Group of orthologs #5202. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

F7A6W5              	100.00%		H3C0X5              	100.00%
Bootstrap support for F7A6W5 as seed ortholog is 100%.
Bootstrap support for H3C0X5 as seed ortholog is 100%.

Group of orthologs #5203. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

F6TGA7              	100.00%		H3DHU3              	100.00%
Bootstrap support for F6TGA7 as seed ortholog is 100%.
Bootstrap support for H3DHU3 as seed ortholog is 100%.

Group of orthologs #5204. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 T.nigroviridis:50

H2XTT8              	100.00%		H3CY66              	100.00%
Bootstrap support for H2XTT8 as seed ortholog is 100%.
Bootstrap support for H3CY66 as seed ortholog is 100%.

Group of orthologs #5205. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 T.nigroviridis:50

H2Y3G3              	100.00%		H3DQT3              	100.00%
Bootstrap support for H2Y3G3 as seed ortholog is 54%.
Alternative seed ortholog is F6RG14 (1 bits away from this cluster)
Bootstrap support for H3DQT3 as seed ortholog is 100%.

Group of orthologs #5206. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:49

F6WDB5              	100.00%		H3C3G9              	100.00%
                    	       		H3CH49              	22.35%
Bootstrap support for F6WDB5 as seed ortholog is 100%.
Bootstrap support for H3C3G9 as seed ortholog is 100%.

Group of orthologs #5207. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:49

F6R2K7              	100.00%		H3BY71              	100.00%
Bootstrap support for F6R2K7 as seed ortholog is 100%.
Bootstrap support for H3BY71 as seed ortholog is 100%.

Group of orthologs #5208. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:49

F7BER6              	100.00%		H3BZC0              	100.00%
Bootstrap support for F7BER6 as seed ortholog is 100%.
Bootstrap support for H3BZC0 as seed ortholog is 100%.

Group of orthologs #5209. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:9

F6T2V4              	100.00%		H3CXU2              	100.00%
Bootstrap support for F6T2V4 as seed ortholog is 100%.
Bootstrap support for H3CXU2 as seed ortholog is 71%.
Alternative seed ortholog is H3CL53 (9 bits away from this cluster)

Group of orthologs #5210. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:49

F6QCG4              	100.00%		H3D7Z2              	100.00%
Bootstrap support for F6QCG4 as seed ortholog is 100%.
Bootstrap support for H3D7Z2 as seed ortholog is 100%.

Group of orthologs #5211. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:49

H2XJS5              	100.00%		H3CBF3              	100.00%
Bootstrap support for H2XJS5 as seed ortholog is 100%.
Bootstrap support for H3CBF3 as seed ortholog is 100%.

Group of orthologs #5212. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 T.nigroviridis:49

F6TUG7              	100.00%		Q4RJD1              	100.00%
Bootstrap support for F6TUG7 as seed ortholog is 100%.
Bootstrap support for Q4RJD1 as seed ortholog is 100%.

Group of orthologs #5213. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 T.nigroviridis:48

H2Y2M8              	100.00%		H3CND5              	100.00%
                    	       		H3D7F8              	46.90%
Bootstrap support for H2Y2M8 as seed ortholog is 100%.
Bootstrap support for H3CND5 as seed ortholog is 100%.

Group of orthologs #5214. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 T.nigroviridis:48

H2Y160              	100.00%		H3DQ85              	100.00%
Bootstrap support for H2Y160 as seed ortholog is 100%.
Bootstrap support for H3DQ85 as seed ortholog is 100%.

Group of orthologs #5215. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:47

F6PT97              	100.00%		H3D743              	100.00%
                    	       		H3CJF3              	20.12%
Bootstrap support for F6PT97 as seed ortholog is 100%.
Bootstrap support for H3D743 as seed ortholog is 100%.

Group of orthologs #5216. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:47

H2XXC8              	100.00%		H3DFY9              	100.00%
                    	       		H3DHP2              	49.37%
Bootstrap support for H2XXC8 as seed ortholog is 100%.
Bootstrap support for H3DFY9 as seed ortholog is 100%.

Group of orthologs #5217. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:47

F6X8I8              	100.00%		H3C201              	100.00%
Bootstrap support for F6X8I8 as seed ortholog is 100%.
Bootstrap support for H3C201 as seed ortholog is 100%.

Group of orthologs #5218. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:47

H2Y2L9              	100.00%		H3CJJ3              	100.00%
Bootstrap support for H2Y2L9 as seed ortholog is 100%.
Bootstrap support for H3CJJ3 as seed ortholog is 100%.

Group of orthologs #5219. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 T.nigroviridis:47

H2XU39              	100.00%		Q4RGM4              	100.00%
Bootstrap support for H2XU39 as seed ortholog is 100%.
Bootstrap support for Q4RGM4 as seed ortholog is 100%.

Group of orthologs #5220. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 T.nigroviridis:46

H2XPC3              	100.00%		Q4TAZ0              	100.00%
H2XKW3              	14.65%		H3BZB1              	52.58%
H2XLF7              	9.87%		H3C1V6              	48.40%
H2Y1M3              	7.01%		H3C662              	14.99%
Bootstrap support for H2XPC3 as seed ortholog is 100%.
Bootstrap support for Q4TAZ0 as seed ortholog is 100%.

Group of orthologs #5221. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 T.nigroviridis:46

H2Y3I0              	100.00%		H3D3Q4              	100.00%
H2XTH1              	8.68%		
Bootstrap support for H2Y3I0 as seed ortholog is 100%.
Bootstrap support for H3D3Q4 as seed ortholog is 100%.

Group of orthologs #5222. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 T.nigroviridis:46

F6SUJ3              	100.00%		H3CKU9              	100.00%
Bootstrap support for F6SUJ3 as seed ortholog is 100%.
Bootstrap support for H3CKU9 as seed ortholog is 100%.

Group of orthologs #5223. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:45

F6XXK1              	100.00%		H3CL88              	100.00%
                    	       		Q4SVP1              	88.24%
Bootstrap support for F6XXK1 as seed ortholog is 100%.
Bootstrap support for H3CL88 as seed ortholog is 100%.

Group of orthologs #5224. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:45

H2XLQ7              	100.00%		H3D6H0              	100.00%
Bootstrap support for H2XLQ7 as seed ortholog is 100%.
Bootstrap support for H3D6H0 as seed ortholog is 100%.

Group of orthologs #5225. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 T.nigroviridis:45

H2XKP2              	100.00%		H3DCD9              	100.00%
Bootstrap support for H2XKP2 as seed ortholog is 100%.
Bootstrap support for H3DCD9 as seed ortholog is 100%.

Group of orthologs #5226. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 T.nigroviridis:44

F6X3C5              	100.00%		H3CK82              	100.00%
                    	       		H3CIX2              	8.17%
Bootstrap support for F6X3C5 as seed ortholog is 51%.
Alternative seed ortholog is F6U3S7 (3 bits away from this cluster)
Bootstrap support for H3CK82 as seed ortholog is 100%.

Group of orthologs #5227. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 T.nigroviridis:44

F6YQ68              	100.00%		H3D8M3              	100.00%
                    	       		H3CW99              	31.60%
Bootstrap support for F6YQ68 as seed ortholog is 100%.
Bootstrap support for H3D8M3 as seed ortholog is 100%.

Group of orthologs #5228. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 T.nigroviridis:43

F7A165              	100.00%		H3CK71              	100.00%
                    	       		H3CHZ7              	87.86%
                    	       		H3CDC2              	84.67%
                    	       		H3CLP1              	80.66%
                    	       		H3CCU9              	80.04%
                    	       		H3CK07              	69.14%
                    	       		H3CIK7              	67.18%
                    	       		H3CFY2              	62.86%
                    	       		H3CK72              	59.77%
                    	       		H3D9A3              	56.48%
                    	       		H3CB99              	53.19%
                    	       		Q4T852              	42.70%
                    	       		H3D755              	41.46%
                    	       		H3BVM6              	23.66%
                    	       		H3D5K5              	20.37%
                    	       		H3CLQ1              	5.14%
Bootstrap support for F7A165 as seed ortholog is 100%.
Bootstrap support for H3CK71 as seed ortholog is 100%.

Group of orthologs #5229. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 T.nigroviridis:43

H2XKB2              	100.00%		H3CMW4              	100.00%
F6Y4B4              	13.06%		H3C9N3              	27.25%
F6QFD6              	7.88%		
Bootstrap support for H2XKB2 as seed ortholog is 100%.
Bootstrap support for H3CMW4 as seed ortholog is 100%.

Group of orthologs #5230. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 T.nigroviridis:41

F6XFV0              	100.00%		H3C6K5              	100.00%
Bootstrap support for F6XFV0 as seed ortholog is 100%.
Bootstrap support for H3C6K5 as seed ortholog is 100%.

Group of orthologs #5231. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 T.nigroviridis:41

H2XL35              	100.00%		H3CJD2              	100.00%
Bootstrap support for H2XL35 as seed ortholog is 100%.
Bootstrap support for H3CJD2 as seed ortholog is 100%.

Group of orthologs #5232. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:40

F6Y7H6              	100.00%		H3C0I9              	100.00%
F6Y7J8              	95.86%		H3DIV2              	25.60%
                    	       		H3C5X3              	21.74%
Bootstrap support for F6Y7H6 as seed ortholog is 100%.
Bootstrap support for H3C0I9 as seed ortholog is 100%.

Group of orthologs #5233. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 T.nigroviridis:40

F6XWL1              	100.00%		Q4SKM0              	100.00%
                    	       		H3CGD7              	21.29%
Bootstrap support for F6XWL1 as seed ortholog is 100%.
Bootstrap support for Q4SKM0 as seed ortholog is 100%.