###################################
1824 groups of orthologs
2297 in-paralogs from C.intestinalis
2054 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 1854 bits
Score difference with first non-orthologous sequence - C.intestinalis:1854 S.stipitis:1096

F6SUC2              	100.00%		A3GID7              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #2. Best score 1742 bits
Score difference with first non-orthologous sequence - C.intestinalis:1742 S.stipitis:1742

F6T0F1              	100.00%		A3GH39              	100.00%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for A3GH39 as seed ortholog is 100%.

Group of orthologs #3. Best score 1674 bits
Score difference with first non-orthologous sequence - C.intestinalis:1674 S.stipitis:1674

F7AMF6              	100.00%		A3LV67              	100.00%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for A3LV67 as seed ortholog is 100%.

Group of orthologs #4. Best score 1647 bits
Score difference with first non-orthologous sequence - C.intestinalis:1647 S.stipitis:389

F6ZLB7              	100.00%		A3GEY0              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for A3GEY0 as seed ortholog is 99%.

Group of orthologs #5. Best score 1604 bits
Score difference with first non-orthologous sequence - C.intestinalis:1604 S.stipitis:1604

F6WUQ7              	100.00%		A3LPB9              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for A3LPB9 as seed ortholog is 100%.

Group of orthologs #6. Best score 1421 bits
Score difference with first non-orthologous sequence - C.intestinalis:1421 S.stipitis:669

F6QR00              	100.00%		A3GFG5              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for A3GFG5 as seed ortholog is 100%.

Group of orthologs #7. Best score 1230 bits
Score difference with first non-orthologous sequence - C.intestinalis:1230 S.stipitis:1230

F6TWU9              	100.00%		A3LYM8              	100.00%
Bootstrap support for F6TWU9 as seed ortholog is 100%.
Bootstrap support for A3LYM8 as seed ortholog is 100%.

Group of orthologs #8. Best score 1150 bits
Score difference with first non-orthologous sequence - C.intestinalis:1002 S.stipitis:1150

F7AKQ3              	100.00%		A3LTD7              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #9. Best score 1132 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.stipitis:1132

F6ZKS0              	100.00%		A3LZU2              	100.00%
Bootstrap support for F6ZKS0 as seed ortholog is 68%.
Alternative seed ortholog is H2XPC8 (14 bits away from this cluster)
Bootstrap support for A3LZU2 as seed ortholog is 100%.

Group of orthologs #10. Best score 1114 bits
Score difference with first non-orthologous sequence - C.intestinalis:1114 S.stipitis:50

F6XJM1              	100.00%		A3LNC3              	100.00%
Bootstrap support for F6XJM1 as seed ortholog is 100%.
Bootstrap support for A3LNC3 as seed ortholog is 75%.

Group of orthologs #11. Best score 1110 bits
Score difference with first non-orthologous sequence - C.intestinalis:1110 S.stipitis:647

F6VLN4              	100.00%		A3LQG9              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for A3LQG9 as seed ortholog is 100%.

Group of orthologs #12. Best score 1098 bits
Score difference with first non-orthologous sequence - C.intestinalis:1098 S.stipitis:709

F6XKY1              	100.00%		A3LNB1              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for A3LNB1 as seed ortholog is 100%.

Group of orthologs #13. Best score 1089 bits
Score difference with first non-orthologous sequence - C.intestinalis:1089 S.stipitis:1089

F7AKG2              	100.00%		A3GF24              	100.00%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for A3GF24 as seed ortholog is 100%.

Group of orthologs #14. Best score 1054 bits
Score difference with first non-orthologous sequence - C.intestinalis:1054 S.stipitis:1054

F6W1H2              	100.00%		A3LNZ5              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for A3LNZ5 as seed ortholog is 100%.

Group of orthologs #15. Best score 1054 bits
Score difference with first non-orthologous sequence - C.intestinalis:1054 S.stipitis:1054

F6Y8C3              	100.00%		A3M082              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for A3M082 as seed ortholog is 100%.

Group of orthologs #16. Best score 1052 bits
Score difference with first non-orthologous sequence - C.intestinalis:1052 S.stipitis:1052

F6R8H4              	100.00%		A3LP93              	100.00%
                    	       		A3LZQ8              	12.34%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for A3LP93 as seed ortholog is 100%.

Group of orthologs #17. Best score 1052 bits
Score difference with first non-orthologous sequence - C.intestinalis:1052 S.stipitis:1052

F6Z5U4              	100.00%		A3LY83              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for A3LY83 as seed ortholog is 100%.

Group of orthologs #18. Best score 1045 bits
Score difference with first non-orthologous sequence - C.intestinalis:1045 S.stipitis:723

F6WCR1              	100.00%		A3LYU1              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for A3LYU1 as seed ortholog is 100%.

Group of orthologs #19. Best score 1032 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.stipitis:268

F6PGX9              	100.00%		A3LPF9              	100.00%
Bootstrap support for F6PGX9 as seed ortholog is 99%.
Bootstrap support for A3LPF9 as seed ortholog is 99%.

Group of orthologs #20. Best score 1006 bits
Score difference with first non-orthologous sequence - C.intestinalis:1006 S.stipitis:1006

F6U4V1              	100.00%		A3LQ33              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for A3LQ33 as seed ortholog is 100%.

Group of orthologs #21. Best score 1004 bits
Score difference with first non-orthologous sequence - C.intestinalis:1004 S.stipitis:563

F6S181              	100.00%		A3LWA8              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for A3LWA8 as seed ortholog is 100%.

Group of orthologs #22. Best score 988 bits
Score difference with first non-orthologous sequence - C.intestinalis:988 S.stipitis:988

H2XJT1              	100.00%		A3GH27              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for A3GH27 as seed ortholog is 100%.

Group of orthologs #23. Best score 981 bits
Score difference with first non-orthologous sequence - C.intestinalis:981 S.stipitis:981

F6XQM9              	100.00%		A3LYJ8              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for A3LYJ8 as seed ortholog is 100%.

Group of orthologs #24. Best score 977 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:294

F6W8I3              	100.00%		A3GGW0              	100.00%
                    	       		A3LXD9              	37.29%
Bootstrap support for F6W8I3 as seed ortholog is 99%.
Bootstrap support for A3GGW0 as seed ortholog is 100%.

Group of orthologs #25. Best score 964 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.stipitis:368

F6ZHQ8              	100.00%		A3LZJ0              	100.00%
Bootstrap support for F6ZHQ8 as seed ortholog is 99%.
Bootstrap support for A3LZJ0 as seed ortholog is 99%.

Group of orthologs #26. Best score 952 bits
Score difference with first non-orthologous sequence - C.intestinalis:952 S.stipitis:952

F6YYG7              	100.00%		A3LQC8              	100.00%
Bootstrap support for F6YYG7 as seed ortholog is 100%.
Bootstrap support for A3LQC8 as seed ortholog is 100%.

Group of orthologs #27. Best score 908 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 S.stipitis:543

H2XZZ5              	100.00%		A3GGR7              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for A3GGR7 as seed ortholog is 100%.

Group of orthologs #28. Best score 897 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 S.stipitis:897

F6SWL4              	100.00%		A3LUA0              	100.00%
Bootstrap support for F6SWL4 as seed ortholog is 100%.
Bootstrap support for A3LUA0 as seed ortholog is 100%.

Group of orthologs #29. Best score 895 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 S.stipitis:427

Q4H2Q8              	100.00%		A3LQ23              	100.00%
                    	       		A3GFQ5              	5.82%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for A3LQ23 as seed ortholog is 100%.

Group of orthologs #30. Best score 881 bits
Score difference with first non-orthologous sequence - C.intestinalis:881 S.stipitis:881

F6YD90              	100.00%		A3LV95              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for A3LV95 as seed ortholog is 100%.

Group of orthologs #31. Best score 866 bits
Score difference with first non-orthologous sequence - C.intestinalis:866 S.stipitis:866

F6UM75              	100.00%		A3GF70              	100.00%
Bootstrap support for F6UM75 as seed ortholog is 100%.
Bootstrap support for A3GF70 as seed ortholog is 100%.

Group of orthologs #32. Best score 866 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 S.stipitis:866

H2XQK9              	100.00%		F5Y6K2              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for F5Y6K2 as seed ortholog is 100%.

Group of orthologs #33. Best score 842 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.stipitis:842

H2Y1Z9              	100.00%		A3LRI3              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #34. Best score 831 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.stipitis:496

H2XRP2              	100.00%		A3M0L3              	100.00%
Bootstrap support for H2XRP2 as seed ortholog is 100%.
Bootstrap support for A3M0L3 as seed ortholog is 100%.

Group of orthologs #35. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:196

F6SXM4              	100.00%		A3LN25              	100.00%
F7BHA0              	14.35%		
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for A3LN25 as seed ortholog is 100%.

Group of orthologs #36. Best score 820 bits
Score difference with first non-orthologous sequence - C.intestinalis:820 S.stipitis:820

F6Y1Q3              	100.00%		A3LPZ7              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for A3LPZ7 as seed ortholog is 100%.

Group of orthologs #37. Best score 816 bits
Score difference with first non-orthologous sequence - C.intestinalis:816 S.stipitis:721

F6UXR3              	100.00%		A3GHV9              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for A3GHV9 as seed ortholog is 100%.

Group of orthologs #38. Best score 810 bits
Score difference with first non-orthologous sequence - C.intestinalis:810 S.stipitis:810

F6TML4              	100.00%		A3LQY8              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for A3LQY8 as seed ortholog is 100%.

Group of orthologs #39. Best score 804 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.stipitis:804

F6WRK8              	100.00%		A3GI45              	100.00%
Bootstrap support for F6WRK8 as seed ortholog is 100%.
Bootstrap support for A3GI45 as seed ortholog is 100%.

Group of orthologs #40. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 S.stipitis:673

F6Y4K6              	100.00%		A3LVX3              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for A3LVX3 as seed ortholog is 100%.

Group of orthologs #41. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 S.stipitis:789

F6XU15              	100.00%		A3LRN4              	100.00%
Bootstrap support for F6XU15 as seed ortholog is 70%.
Alternative seed ortholog is F7BPQ7 (31 bits away from this cluster)
Bootstrap support for A3LRN4 as seed ortholog is 100%.

Group of orthologs #42. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.stipitis:180

H2XU53              	100.00%		A3LYI6              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for A3LYI6 as seed ortholog is 99%.

Group of orthologs #43. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.stipitis:782

H2Y0Q1              	100.00%		A3LQS2              	100.00%
Bootstrap support for H2Y0Q1 as seed ortholog is 100%.
Bootstrap support for A3LQS2 as seed ortholog is 100%.

Group of orthologs #44. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 S.stipitis:777

F7BKT8              	100.00%		A3LTA6              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for A3LTA6 as seed ortholog is 100%.

Group of orthologs #45. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 S.stipitis:769

F6QDE3              	100.00%		A3LUF6              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for A3LUF6 as seed ortholog is 100%.

Group of orthologs #46. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 S.stipitis:262

H2XKD5              	100.00%		A3GFA2              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for A3GFA2 as seed ortholog is 99%.

Group of orthologs #47. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 S.stipitis:752

F6Z743              	100.00%		A3M067              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for A3M067 as seed ortholog is 100%.

Group of orthologs #48. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:751 S.stipitis:751

F6VC80              	100.00%		A3LUH0              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #49. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 S.stipitis:751

F6YYE4              	100.00%		A3LU44              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for A3LU44 as seed ortholog is 100%.

Group of orthologs #50. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 S.stipitis:619

F7A8C2              	100.00%		A3LY21              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for A3LY21 as seed ortholog is 100%.

Group of orthologs #51. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 S.stipitis:529

H2XSX9              	100.00%		A3LQC6              	100.00%
H2XZ08              	17.22%		
Bootstrap support for H2XSX9 as seed ortholog is 78%.
Bootstrap support for A3LQC6 as seed ortholog is 100%.

Group of orthologs #52. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:744 S.stipitis:744

F6U4L6              	100.00%		A3LZ34              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for A3LZ34 as seed ortholog is 100%.

Group of orthologs #53. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:734

F6Q9K0              	100.00%		A3LVX8              	100.00%
Bootstrap support for F6Q9K0 as seed ortholog is 94%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #54. Best score 731 bits
Score difference with first non-orthologous sequence - C.intestinalis:627 S.stipitis:731

L7N0S7              	100.00%		A3GGR8              	100.00%
F6RR11              	10.91%		
Bootstrap support for L7N0S7 as seed ortholog is 100%.
Bootstrap support for A3GGR8 as seed ortholog is 100%.

Group of orthologs #55. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 S.stipitis:555

F6UKC4              	100.00%		A3GHT9              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for A3GHT9 as seed ortholog is 100%.

Group of orthologs #56. Best score 729 bits
Score difference with first non-orthologous sequence - C.intestinalis:729 S.stipitis:729

F7APZ8              	100.00%		A3GH46              	100.00%
Bootstrap support for F7APZ8 as seed ortholog is 100%.
Bootstrap support for A3GH46 as seed ortholog is 100%.

Group of orthologs #57. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 S.stipitis:726

F7BBW9              	100.00%		A3GGW5              	100.00%
Bootstrap support for F7BBW9 as seed ortholog is 100%.
Bootstrap support for A3GGW5 as seed ortholog is 100%.

Group of orthologs #58. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 S.stipitis:725

F6QRG3              	100.00%		A3GFX3              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for A3GFX3 as seed ortholog is 100%.

Group of orthologs #59. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.stipitis:250

F6SH00              	100.00%		A3GHD2              	100.00%
                    	       		A3LZD5              	27.28%
Bootstrap support for F6SH00 as seed ortholog is 52%.
Alternative seed ortholog is H2XS32 (12 bits away from this cluster)
Bootstrap support for A3GHD2 as seed ortholog is 99%.

Group of orthologs #60. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.stipitis:556

L7N0T3              	100.00%		A3LX42              	100.00%
F6SYL0              	95.34%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for A3LX42 as seed ortholog is 100%.

Group of orthologs #61. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:720 S.stipitis:720

F6QX34              	100.00%		A3LYE9              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for A3LYE9 as seed ortholog is 100%.

Group of orthologs #62. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:720

F6TIZ3              	100.00%		A3LYL7              	100.00%
Bootstrap support for F6TIZ3 as seed ortholog is 99%.
Bootstrap support for A3LYL7 as seed ortholog is 100%.

Group of orthologs #63. Best score 719 bits
Score difference with first non-orthologous sequence - C.intestinalis:719 S.stipitis:395

F6WXT4              	100.00%		A3LU88              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for A3LU88 as seed ortholog is 100%.

Group of orthologs #64. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 S.stipitis:717

F6PV45              	100.00%		A3LWF3              	100.00%
Bootstrap support for F6PV45 as seed ortholog is 100%.
Bootstrap support for A3LWF3 as seed ortholog is 100%.

Group of orthologs #65. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 S.stipitis:717

F6RW91              	100.00%		A3LXK9              	100.00%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for A3LXK9 as seed ortholog is 100%.

Group of orthologs #66. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 S.stipitis:353

F6SI05              	100.00%		A3LWK8              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 100%.

Group of orthologs #67. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 S.stipitis:573

F7B0Q2              	100.00%		A3LTP2              	100.00%
F6QB29              	97.67%		
F6SJ24              	93.95%		
F6XCZ8              	86.51%		
F6QB20              	83.26%		
L7N0T5              	81.86%		
F6UV18              	21.86%		
Bootstrap support for F7B0Q2 as seed ortholog is 100%.
Bootstrap support for A3LTP2 as seed ortholog is 100%.

Group of orthologs #68. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.stipitis:506

H2XL55              	100.00%		A3GHZ1              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 100%.

Group of orthologs #69. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:703 S.stipitis:703

F6UE33              	100.00%		A3GHG4              	100.00%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for A3GHG4 as seed ortholog is 100%.

Group of orthologs #70. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:700

F6YNJ1              	100.00%		A3LPD9              	100.00%
Bootstrap support for F6YNJ1 as seed ortholog is 98%.
Bootstrap support for A3LPD9 as seed ortholog is 100%.

Group of orthologs #71. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 S.stipitis:692

F6SXA4              	100.00%		A3LP29              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for A3LP29 as seed ortholog is 100%.

Group of orthologs #72. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 S.stipitis:543

F6TPR3              	100.00%		A3LST8              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for A3LST8 as seed ortholog is 100%.

Group of orthologs #73. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:287

A2SY09              	100.00%		A3GI55              	100.00%
F6SCP4              	70.89%		
F6QBJ1              	48.10%		
L7N0T1              	43.04%		
F6T8C7              	41.77%		
F6SDC9              	41.77%		
Bootstrap support for A2SY09 as seed ortholog is 99%.
Bootstrap support for A3GI55 as seed ortholog is 100%.

Group of orthologs #74. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 S.stipitis:675

F7BJC2              	100.00%		A3LN60              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for A3LN60 as seed ortholog is 100%.

Group of orthologs #75. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:673 S.stipitis:673

F6XN27              	100.00%		A3LNA3              	100.00%
Bootstrap support for F6XN27 as seed ortholog is 100%.
Bootstrap support for A3LNA3 as seed ortholog is 100%.

Group of orthologs #76. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.stipitis:670

F6Z4G6              	100.00%		A3LT63              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for A3LT63 as seed ortholog is 100%.

Group of orthologs #77. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.stipitis:670

F7AUJ3              	100.00%		A3LTZ2              	100.00%
Bootstrap support for F7AUJ3 as seed ortholog is 100%.
Bootstrap support for A3LTZ2 as seed ortholog is 100%.

Group of orthologs #78. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:670 S.stipitis:670

F7B6E8              	100.00%		A3M096              	100.00%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for A3M096 as seed ortholog is 100%.

Group of orthologs #79. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:668 S.stipitis:668

F7BEF3              	100.00%		A3LTV5              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for A3LTV5 as seed ortholog is 100%.

Group of orthologs #80. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 S.stipitis:667

F6SI53              	100.00%		A3GF06              	100.00%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 100%.

Group of orthologs #81. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.stipitis:665

F6RKM9              	100.00%		A3LR24              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for A3LR24 as seed ortholog is 100%.

Group of orthologs #82. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 S.stipitis:665

H2XVY7              	100.00%		A3LQE3              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for A3LQE3 as seed ortholog is 100%.

Group of orthologs #83. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 S.stipitis:663

F7B8G8              	100.00%		A3LZ90              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for A3LZ90 as seed ortholog is 100%.

Group of orthologs #84. Best score 662 bits
Score difference with first non-orthologous sequence - C.intestinalis:662 S.stipitis:662

H2XQX5              	100.00%		A3LNS2              	100.00%
Bootstrap support for H2XQX5 as seed ortholog is 100%.
Bootstrap support for A3LNS2 as seed ortholog is 100%.

Group of orthologs #85. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 S.stipitis:661

F6PZ06              	100.00%		A3GFY8              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for A3GFY8 as seed ortholog is 100%.

Group of orthologs #86. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 S.stipitis:659

F6W7K5              	100.00%		A3LNN0              	100.00%
F6W7I3              	81.13%		
Bootstrap support for F6W7K5 as seed ortholog is 100%.
Bootstrap support for A3LNN0 as seed ortholog is 100%.

Group of orthologs #87. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 S.stipitis:379

F6XJ08              	100.00%		A3GEX5              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for A3GEX5 as seed ortholog is 100%.

Group of orthologs #88. Best score 652 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.stipitis:652

F7BA18              	100.00%		A3LW17              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for A3LW17 as seed ortholog is 100%.

Group of orthologs #89. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 S.stipitis:646

F6YFY0              	100.00%		A3LVE2              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for A3LVE2 as seed ortholog is 100%.

Group of orthologs #90. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 S.stipitis:636

F6XMA0              	100.00%		A3GGF2              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for A3GGF2 as seed ortholog is 100%.

Group of orthologs #91. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 S.stipitis:634

F6Z761              	100.00%		A3GEV9              	100.00%
                    	       		A3M058              	25.93%
Bootstrap support for F6Z761 as seed ortholog is 100%.
Bootstrap support for A3GEV9 as seed ortholog is 100%.

Group of orthologs #92. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 S.stipitis:633

F6YTL6              	100.00%		A3LNG1              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for A3LNG1 as seed ortholog is 100%.

Group of orthologs #93. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.stipitis:436

H2XS20              	100.00%		A3LNR6              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for A3LNR6 as seed ortholog is 100%.

Group of orthologs #94. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 S.stipitis:624

F6PST3              	100.00%		A3GG50              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for A3GG50 as seed ortholog is 100%.

Group of orthologs #95. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.stipitis:166

F6YKR9              	100.00%		A3LP11              	100.00%
F6UYA6              	5.18%		
Bootstrap support for F6YKR9 as seed ortholog is 99%.
Bootstrap support for A3LP11 as seed ortholog is 99%.

Group of orthologs #96. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 S.stipitis:621

F6YQS6              	100.00%		A3LN88              	100.00%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for A3LN88 as seed ortholog is 100%.

Group of orthologs #97. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 S.stipitis:619

H2XQI5              	100.00%		A3LP60              	100.00%
Bootstrap support for H2XQI5 as seed ortholog is 100%.
Bootstrap support for A3LP60 as seed ortholog is 100%.

Group of orthologs #98. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 S.stipitis:614

F6RHA1              	100.00%		A3LPC5              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for A3LPC5 as seed ortholog is 100%.

Group of orthologs #99. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.stipitis:613

H2XYN5              	100.00%		A3LW76              	100.00%
                    	       		A3LXD8              	31.67%
Bootstrap support for H2XYN5 as seed ortholog is 100%.
Bootstrap support for A3LW76 as seed ortholog is 100%.

Group of orthologs #100. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.stipitis:296

F6YBA5              	100.00%		A3LMW4              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 99%.
Bootstrap support for A3LMW4 as seed ortholog is 99%.

Group of orthologs #101. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:611

F7BGT4              	100.00%		A3LTS6              	100.00%
Bootstrap support for F7BGT4 as seed ortholog is 76%.
Bootstrap support for A3LTS6 as seed ortholog is 100%.

Group of orthologs #102. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.stipitis:610

F6XCK4              	100.00%		A3LNU0              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 100%.
Bootstrap support for A3LNU0 as seed ortholog is 100%.

Group of orthologs #103. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 S.stipitis:609

F6R8X1              	100.00%		A3GEZ1              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for A3GEZ1 as seed ortholog is 100%.

Group of orthologs #104. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 S.stipitis:609

F6SXA9              	100.00%		A3LV22              	100.00%
Bootstrap support for F6SXA9 as seed ortholog is 100%.
Bootstrap support for A3LV22 as seed ortholog is 100%.

Group of orthologs #105. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 S.stipitis:608

F6Q9P9              	100.00%		A3GFY3              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for A3GFY3 as seed ortholog is 100%.

Group of orthologs #106. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 S.stipitis:607

F6PYU7              	100.00%		A3LNQ5              	100.00%
                    	       		A3LPC9              	22.21%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for A3LNQ5 as seed ortholog is 100%.

Group of orthologs #107. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 S.stipitis:604

F6WTE3              	100.00%		A3LXU1              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #108. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.stipitis:603

F6THL0              	100.00%		A3GHX5              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for A3GHX5 as seed ortholog is 100%.

Group of orthologs #109. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 S.stipitis:500

F6X2D1              	100.00%		A3LTI4              	100.00%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for A3LTI4 as seed ortholog is 100%.

Group of orthologs #110. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 S.stipitis:603

F7BHP4              	100.00%		A3LTW6              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for A3LTW6 as seed ortholog is 100%.

Group of orthologs #111. Best score 600 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 S.stipitis:433

F7AJ84              	100.00%		A3LZG4              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for A3LZG4 as seed ortholog is 100%.

Group of orthologs #112. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 S.stipitis:537

F7AYB9              	100.00%		A3LQU4              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for A3LQU4 as seed ortholog is 100%.

Group of orthologs #113. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 S.stipitis:590

F6V5U6              	100.00%		A3LVS2              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #114. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.stipitis:391

H2XQT6              	100.00%		A3LRL2              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 99%.
Bootstrap support for A3LRL2 as seed ortholog is 100%.

Group of orthologs #115. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.stipitis:188

H2Y3E7              	100.00%		A3GI51              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for A3GI51 as seed ortholog is 99%.

Group of orthologs #116. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.stipitis:284

F6UHH9              	100.00%		A3LQW7              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 99%.
Bootstrap support for A3LQW7 as seed ortholog is 100%.

Group of orthologs #117. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.stipitis:579

F6QIX3              	100.00%		A3GF17              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for A3GF17 as seed ortholog is 100%.

Group of orthologs #118. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.stipitis:579

F6U2M6              	100.00%		A3GFP7              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for A3GFP7 as seed ortholog is 100%.

Group of orthologs #119. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:223

F6Y8H4              	100.00%		A3LNZ1              	100.00%
                    	       		A3LMU7              	16.75%
Bootstrap support for F6Y8H4 as seed ortholog is 99%.
Bootstrap support for A3LNZ1 as seed ortholog is 100%.

Group of orthologs #120. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.stipitis:104

F6YUT1              	100.00%		A3LXA5              	100.00%
                    	       		A3LUJ6              	6.53%
Bootstrap support for F6YUT1 as seed ortholog is 99%.
Bootstrap support for A3LXA5 as seed ortholog is 95%.

Group of orthologs #121. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 S.stipitis:576

F6QH36              	100.00%		A3LYX2              	100.00%
Bootstrap support for F6QH36 as seed ortholog is 100%.
Bootstrap support for A3LYX2 as seed ortholog is 100%.

Group of orthologs #122. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 S.stipitis:365

F6UCG0              	100.00%		A3LZN1              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for A3LZN1 as seed ortholog is 100%.

Group of orthologs #123. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 S.stipitis:573

F6VJQ1              	100.00%		A3LZJ4              	100.00%
F6ZJN8              	100.00%		
Bootstrap support for F6VJQ1 as seed ortholog is 100%.
Bootstrap support for F6ZJN8 as seed ortholog is 100%.
Bootstrap support for A3LZJ4 as seed ortholog is 100%.

Group of orthologs #124. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:318

F6WI66              	100.00%		A3LQ01              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 99%.
Bootstrap support for A3LQ01 as seed ortholog is 100%.

Group of orthologs #125. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 S.stipitis:572

F7BL51              	100.00%		A3LXY7              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for A3LXY7 as seed ortholog is 100%.

Group of orthologs #126. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.stipitis:567

F6R356              	100.00%		A3GF60              	100.00%
                    	       		A3LUS8              	19.72%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for A3GF60 as seed ortholog is 100%.

Group of orthologs #127. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.stipitis:567

F6UWX3              	100.00%		A3M0A5              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for A3M0A5 as seed ortholog is 100%.

Group of orthologs #128. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 S.stipitis:418

F6Z194              	100.00%		A3LST5              	100.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for A3LST5 as seed ortholog is 100%.

Group of orthologs #129. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.stipitis:280

H2XXZ3              	100.00%		A3LSJ3              	100.00%
Bootstrap support for H2XXZ3 as seed ortholog is 100%.
Bootstrap support for A3LSJ3 as seed ortholog is 100%.

Group of orthologs #130. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:69

F6PMK8              	100.00%		A3LNY6              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 94%.
Bootstrap support for A3LNY6 as seed ortholog is 96%.

Group of orthologs #131. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.stipitis:399

F7B898              	100.00%		A3LWX3              	100.00%
Bootstrap support for F7B898 as seed ortholog is 100%.
Bootstrap support for A3LWX3 as seed ortholog is 100%.

Group of orthologs #132. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 S.stipitis:564

F6PNS6              	100.00%		A3LNJ6              	100.00%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for A3LNJ6 as seed ortholog is 100%.

Group of orthologs #133. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 S.stipitis:563

F6T9M1              	100.00%		A3LNB5              	100.00%
Bootstrap support for F6T9M1 as seed ortholog is 100%.
Bootstrap support for A3LNB5 as seed ortholog is 100%.

Group of orthologs #134. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 S.stipitis:563

F7A2X8              	100.00%		A3LWV7              	100.00%
Bootstrap support for F7A2X8 as seed ortholog is 100%.
Bootstrap support for A3LWV7 as seed ortholog is 100%.

Group of orthologs #135. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.stipitis:561

F6YGU8              	100.00%		A3GGU6              	100.00%
F6RCK1              	16.30%		
Bootstrap support for F6YGU8 as seed ortholog is 100%.
Bootstrap support for A3GGU6 as seed ortholog is 100%.

Group of orthologs #136. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:116

F6YDI9              	100.00%		A3GHM9              	100.00%
                    	       		A3LR07              	40.72%
Bootstrap support for F6YDI9 as seed ortholog is 95%.
Bootstrap support for A3GHM9 as seed ortholog is 99%.

Group of orthologs #137. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.stipitis:158

F6Y1K6              	100.00%		A3LZ03              	100.00%
F6Q5E4              	67.72%		
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for A3LZ03 as seed ortholog is 100%.

Group of orthologs #138. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 S.stipitis:561

H2XLC6              	100.00%		A3LUC6              	100.00%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for A3LUC6 as seed ortholog is 100%.

Group of orthologs #139. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 S.stipitis:560

F6SHG8              	100.00%		A3LY35              	100.00%
Bootstrap support for F6SHG8 as seed ortholog is 100%.
Bootstrap support for A3LY35 as seed ortholog is 100%.

Group of orthologs #140. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 S.stipitis:495

F6VRH3              	100.00%		A3GH45              	100.00%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for A3GH45 as seed ortholog is 100%.

Group of orthologs #141. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.stipitis:559

F6XKP0              	100.00%		A3GEY5              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for A3GEY5 as seed ortholog is 100%.

Group of orthologs #142. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.stipitis:385

F6XF93              	100.00%		A3GFV3              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for A3GFV3 as seed ortholog is 100%.

Group of orthologs #143. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.stipitis:308

F6TZX4              	100.00%		A3LQ55              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 99%.
Bootstrap support for A3LQ55 as seed ortholog is 100%.

Group of orthologs #144. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 S.stipitis:558

F6YXI8              	100.00%		A3LXF0              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for A3LXF0 as seed ortholog is 100%.

Group of orthologs #145. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 S.stipitis:558

H2XU13              	100.00%		A3M0F2              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for A3M0F2 as seed ortholog is 100%.

Group of orthologs #146. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 S.stipitis:556

F6XTJ3              	100.00%		A3LPZ4              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for A3LPZ4 as seed ortholog is 100%.

Group of orthologs #147. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 S.stipitis:554

F6ZF70              	100.00%		A3LT36              	100.00%
F6QFH5              	12.11%		A3LR11              	22.90%
Bootstrap support for F6ZF70 as seed ortholog is 100%.
Bootstrap support for A3LT36 as seed ortholog is 100%.

Group of orthologs #148. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.stipitis:554

F6V7V9              	100.00%		A3LW01              	100.00%
Bootstrap support for F6V7V9 as seed ortholog is 99%.
Bootstrap support for A3LW01 as seed ortholog is 100%.

Group of orthologs #149. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 S.stipitis:159

F7AK99              	100.00%		A3LVD6              	100.00%
Bootstrap support for F7AK99 as seed ortholog is 100%.
Bootstrap support for A3LVD6 as seed ortholog is 99%.

Group of orthologs #150. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:316

F7AXJ1              	100.00%		A3LTX5              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 99%.
Bootstrap support for A3LTX5 as seed ortholog is 100%.

Group of orthologs #151. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 S.stipitis:548

F6UQ90              	100.00%		A3LY69              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 100%.
Bootstrap support for A3LY69 as seed ortholog is 100%.

Group of orthologs #152. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 S.stipitis:546

F6QB99              	100.00%		A3LZC1              	100.00%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for A3LZC1 as seed ortholog is 100%.

Group of orthologs #153. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 S.stipitis:305

F6S399              	100.00%		A3LWA5              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for A3LWA5 as seed ortholog is 100%.

Group of orthologs #154. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.stipitis:543

F6PL95              	100.00%		A3LYW7              	100.00%
                    	       		A3LY20              	26.86%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for A3LYW7 as seed ortholog is 100%.

Group of orthologs #155. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 S.stipitis:541

F6WUJ1              	100.00%		A3LUE4              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for A3LUE4 as seed ortholog is 100%.

Group of orthologs #156. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 S.stipitis:326

F6ZM86              	100.00%		A3GEU5              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for A3GEU5 as seed ortholog is 100%.

Group of orthologs #157. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 S.stipitis:536

H2XKW2              	100.00%		A3LWW5              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for A3LWW5 as seed ortholog is 100%.

Group of orthologs #158. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.stipitis:350

F6RHK8              	100.00%		A3GF71              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for A3GF71 as seed ortholog is 100%.

Group of orthologs #159. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 S.stipitis:390

F6WR85              	100.00%		A3LYY5              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for A3LYY5 as seed ortholog is 100%.

Group of orthologs #160. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 S.stipitis:531

F6ZDC7              	100.00%		A3LQX4              	100.00%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for A3LQX4 as seed ortholog is 100%.

Group of orthologs #161. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.stipitis:111

H2XLC2              	100.00%		A3LZW0              	100.00%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for A3LZW0 as seed ortholog is 99%.

Group of orthologs #162. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:297

F6TGH1              	100.00%		A3GFD8              	100.00%
Bootstrap support for F6TGH1 as seed ortholog is 99%.
Bootstrap support for A3GFD8 as seed ortholog is 100%.

Group of orthologs #163. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.stipitis:350

F6TMJ9              	100.00%		A3GFI4              	100.00%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for A3GFI4 as seed ortholog is 100%.

Group of orthologs #164. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 S.stipitis:526

F6XZ93              	100.00%		A3LQD6              	100.00%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #165. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.stipitis:525

H2Y1C4              	100.00%		A3LYT5              	100.00%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for A3LYT5 as seed ortholog is 100%.

Group of orthologs #166. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 S.stipitis:523

F6ZC49              	100.00%		A3GFA7              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for A3GFA7 as seed ortholog is 100%.

Group of orthologs #167. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 S.stipitis:521

F6VGC6              	100.00%		A3LWX0              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for A3LWX0 as seed ortholog is 100%.

Group of orthologs #168. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.stipitis:520

F6Z5E6              	100.00%		A3M072              	100.00%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for A3M072 as seed ortholog is 100%.

Group of orthologs #169. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 S.stipitis:519

F6XJU3              	100.00%		A3LTF8              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for A3LTF8 as seed ortholog is 100%.

Group of orthologs #170. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 S.stipitis:517

F6XC92              	100.00%		A3LPM2              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for A3LPM2 as seed ortholog is 100%.

Group of orthologs #171. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 S.stipitis:517

F6YKX8              	100.00%		A3LU50              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for A3LU50 as seed ortholog is 100%.

Group of orthologs #172. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 S.stipitis:517

F6YND1              	100.00%		A3LUY2              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #173. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 S.stipitis:517

F7B2M5              	100.00%		A3M0F1              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for A3M0F1 as seed ortholog is 100%.

Group of orthologs #174. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 S.stipitis:514

F6Q0U4              	100.00%		A3GEY9              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for A3GEY9 as seed ortholog is 100%.

Group of orthologs #175. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 S.stipitis:136

F6U7R9              	100.00%		A3LVL5              	100.00%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for A3LVL5 as seed ortholog is 98%.

Group of orthologs #176. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 S.stipitis:510

F6W0L1              	100.00%		A3LVT5              	100.00%
Bootstrap support for F6W0L1 as seed ortholog is 100%.
Bootstrap support for A3LVT5 as seed ortholog is 100%.

Group of orthologs #177. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.stipitis:508

H2XJF1              	100.00%		A3LTJ7              	100.00%
Bootstrap support for H2XJF1 as seed ortholog is 100%.
Bootstrap support for A3LTJ7 as seed ortholog is 100%.

Group of orthologs #178. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 S.stipitis:504

H2XJF4              	100.00%		A3LRJ3              	100.00%
                    	       		A3LY87              	16.09%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for A3LRJ3 as seed ortholog is 100%.

Group of orthologs #179. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.stipitis:166

F6TV75              	100.00%		A3GHK6              	100.00%
Bootstrap support for F6TV75 as seed ortholog is 99%.
Bootstrap support for A3GHK6 as seed ortholog is 99%.

Group of orthologs #180. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.stipitis:503

F6PYH8              	100.00%		A3LY71              	100.00%
Bootstrap support for F6PYH8 as seed ortholog is 100%.
Bootstrap support for A3LY71 as seed ortholog is 100%.

Group of orthologs #181. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 S.stipitis:502

F6RMU1              	100.00%		A3LR72              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for A3LR72 as seed ortholog is 100%.

Group of orthologs #182. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.stipitis:502

F6QNL7              	100.00%		A3LYG2              	100.00%
Bootstrap support for F6QNL7 as seed ortholog is 99%.
Bootstrap support for A3LYG2 as seed ortholog is 100%.

Group of orthologs #183. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.stipitis:189

F6VAS2              	100.00%		A3LP07              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for A3LP07 as seed ortholog is 100%.

Group of orthologs #184. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.stipitis:15

H2XSE7              	100.00%		A3LNE3              	100.00%
F6W5P6              	20.20%		
F6W6R6              	18.42%		
F6Z7V5              	12.08%		
Bootstrap support for H2XSE7 as seed ortholog is 96%.
Bootstrap support for A3LNE3 as seed ortholog is 62%.
Alternative seed ortholog is A3M013 (15 bits away from this cluster)

Group of orthologs #185. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.stipitis:353

F7A581              	100.00%		A3LRX2              	100.00%
F6R9X0              	14.25%		
Bootstrap support for F7A581 as seed ortholog is 100%.
Bootstrap support for A3LRX2 as seed ortholog is 100%.

Group of orthologs #186. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.stipitis:498

F6TKV3              	100.00%		A3LZW8              	100.00%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #187. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:498

H2XPB4              	100.00%		A3LWL5              	100.00%
Bootstrap support for H2XPB4 as seed ortholog is 93%.
Bootstrap support for A3LWL5 as seed ortholog is 100%.

Group of orthologs #188. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 S.stipitis:497

F6WA81              	100.00%		A3GHN8              	100.00%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for A3GHN8 as seed ortholog is 100%.

Group of orthologs #189. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.stipitis:496

F7B580              	100.00%		A3LV88              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for A3LV88 as seed ortholog is 100%.

Group of orthologs #190. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.stipitis:265

F6X7X8              	100.00%		A3LU23              	100.00%
Bootstrap support for F6X7X8 as seed ortholog is 99%.
Bootstrap support for A3LU23 as seed ortholog is 100%.

Group of orthologs #191. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 S.stipitis:239

F6SI15              	100.00%		A3GHU7              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for A3GHU7 as seed ortholog is 99%.

Group of orthologs #192. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 S.stipitis:489

F6UHM2              	100.00%		A3GGQ5              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for A3GGQ5 as seed ortholog is 100%.

Group of orthologs #193. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.stipitis:303

F6VEU9              	100.00%		A3LQP0              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for A3LQP0 as seed ortholog is 100%.

Group of orthologs #194. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 S.stipitis:489

F6XK10              	100.00%		A3LRH3              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for A3LRH3 as seed ortholog is 100%.

Group of orthologs #195. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:489

F6W785              	100.00%		A3LW19              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for A3LW19 as seed ortholog is 100%.

Group of orthologs #196. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 S.stipitis:486

H2XZT6              	100.00%		A3M089              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for A3M089 as seed ortholog is 100%.

Group of orthologs #197. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.stipitis:483

F6RIY5              	100.00%		A3LZT3              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for A3LZT3 as seed ortholog is 100%.

Group of orthologs #198. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.stipitis:483

F6XHC0              	100.00%		A3LS93              	100.00%
Bootstrap support for F6XHC0 as seed ortholog is 100%.
Bootstrap support for A3LS93 as seed ortholog is 100%.

Group of orthologs #199. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.stipitis:334

F6X0I3              	100.00%		A3GI80              	100.00%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for A3GI80 as seed ortholog is 100%.

Group of orthologs #200. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.stipitis:482

F6VVR6              	100.00%		A3LRJ9              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for A3LRJ9 as seed ortholog is 100%.

Group of orthologs #201. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 S.stipitis:481

F6TZ29              	100.00%		A3LPA1              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for A3LPA1 as seed ortholog is 100%.

Group of orthologs #202. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.stipitis:425

F6SDI7              	100.00%		A3LT94              	100.00%
Bootstrap support for F6SDI7 as seed ortholog is 81%.
Bootstrap support for A3LT94 as seed ortholog is 100%.

Group of orthologs #203. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.stipitis:478

F6UI47              	100.00%		A3LUJ3              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #204. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.stipitis:478

F6YXZ3              	100.00%		A3LYE2              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for A3LYE2 as seed ortholog is 100%.

Group of orthologs #205. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.stipitis:166

H2XY07              	100.00%		A3LV99              	100.00%
Bootstrap support for H2XY07 as seed ortholog is 99%.
Bootstrap support for A3LV99 as seed ortholog is 99%.

Group of orthologs #206. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.stipitis:476

F6RNS7              	100.00%		A3LVF1              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for A3LVF1 as seed ortholog is 100%.

Group of orthologs #207. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 S.stipitis:475

F6UW46              	100.00%		A3LRP2              	100.00%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for A3LRP2 as seed ortholog is 100%.

Group of orthologs #208. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.stipitis:202

F6WXA3              	100.00%		A3LRD1              	100.00%
F6WBI7              	54.68%		A3LPT8              	5.34%
Bootstrap support for F6WXA3 as seed ortholog is 99%.
Bootstrap support for A3LRD1 as seed ortholog is 100%.

Group of orthologs #209. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.stipitis:343

F6YDF4              	100.00%		A3LNR1              	100.00%
Bootstrap support for F6YDF4 as seed ortholog is 100%.
Bootstrap support for A3LNR1 as seed ortholog is 100%.

Group of orthologs #210. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.stipitis:471

F6YIL9              	100.00%		A3LWP1              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for A3LWP1 as seed ortholog is 100%.

Group of orthologs #211. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.stipitis:470

F6ZBB5              	100.00%		A3GEZ4              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for A3GEZ4 as seed ortholog is 100%.

Group of orthologs #212. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 S.stipitis:468

F6W1L1              	100.00%		A3LPM3              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for A3LPM3 as seed ortholog is 100%.

Group of orthologs #213. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.stipitis:467

F6ZN98              	100.00%		A3LZY4              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for A3LZY4 as seed ortholog is 100%.

Group of orthologs #214. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 S.stipitis:465

F6SSP0              	100.00%		A3LQX8              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for A3LQX8 as seed ortholog is 100%.

Group of orthologs #215. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 S.stipitis:465

F6V9G2              	100.00%		A3LT99              	100.00%
Bootstrap support for F6V9G2 as seed ortholog is 100%.
Bootstrap support for A3LT99 as seed ortholog is 100%.

Group of orthologs #216. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.stipitis:35

Q8T3S5              	100.00%		A3GID5              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for A3GID5 as seed ortholog is 86%.

Group of orthologs #217. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.stipitis:464

H2XXL7              	100.00%		A3GGX7              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for A3GGX7 as seed ortholog is 100%.

Group of orthologs #218. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 S.stipitis:463

F6QIK7              	100.00%		A3LW22              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #219. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.stipitis:288

H2XJZ4              	100.00%		A3GGE9              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 100%.
Bootstrap support for A3GGE9 as seed ortholog is 100%.

Group of orthologs #220. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 S.stipitis:462

F6UE02              	100.00%		A3GHC7              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for A3GHC7 as seed ortholog is 100%.

Group of orthologs #221. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:206

F6W1I6              	100.00%		A3LP26              	100.00%
Bootstrap support for F6W1I6 as seed ortholog is 99%.
Bootstrap support for A3LP26 as seed ortholog is 99%.

Group of orthologs #222. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.stipitis:460

H2XXZ7              	100.00%		A3LQ70              	100.00%
                    	       		A3LZZ7              	49.25%
                    	       		A3LNP7              	43.28%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #223. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.stipitis:460

F6TAK8              	100.00%		A3LNC1              	100.00%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #224. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.stipitis:400

F6U609              	100.00%		A3LUT0              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for A3LUT0 as seed ortholog is 100%.

Group of orthologs #225. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:200

F6U113              	100.00%		A3GFS0              	100.00%
Bootstrap support for F6U113 as seed ortholog is 99%.
Bootstrap support for A3GFS0 as seed ortholog is 99%.

Group of orthologs #226. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:252

F6PW28              	100.00%		A3LP00              	100.00%
Bootstrap support for F6PW28 as seed ortholog is 99%.
Bootstrap support for A3LP00 as seed ortholog is 100%.

Group of orthologs #227. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.stipitis:67

F6ZFK4              	100.00%		A3LZZ3              	100.00%
H2XJH1              	18.94%		
Bootstrap support for F6ZFK4 as seed ortholog is 99%.
Bootstrap support for A3LZZ3 as seed ortholog is 71%.
Alternative seed ortholog is A3LZW6 (67 bits away from this cluster)

Group of orthologs #228. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 S.stipitis:455

F6ZY44              	100.00%		A3LQP9              	100.00%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #229. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 S.stipitis:455

H2XWZ3              	100.00%		A3LXQ0              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for A3LXQ0 as seed ortholog is 100%.

Group of orthologs #230. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.stipitis:335

F7AMH0              	100.00%		A3LYL8              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for A3LYL8 as seed ortholog is 100%.

Group of orthologs #231. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 S.stipitis:451

F6YEG0              	100.00%		A3GFY2              	100.00%
                    	       		A3GF02              	24.66%
Bootstrap support for F6YEG0 as seed ortholog is 100%.
Bootstrap support for A3GFY2 as seed ortholog is 100%.

Group of orthologs #232. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 S.stipitis:451

F6USH9              	100.00%		A3LW02              	100.00%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for A3LW02 as seed ortholog is 100%.

Group of orthologs #233. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 S.stipitis:451

F6VBU5              	100.00%		A3LXN7              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for A3LXN7 as seed ortholog is 100%.

Group of orthologs #234. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 S.stipitis:449

F7A8S2              	100.00%		A3LY74              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for A3LY74 as seed ortholog is 100%.

Group of orthologs #235. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.stipitis:448

F6Z3I0              	100.00%		A3LQ15              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for A3LQ15 as seed ortholog is 100%.

Group of orthologs #236. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.stipitis:448

F6YQ60              	100.00%		A3LXQ5              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for A3LXQ5 as seed ortholog is 100%.

Group of orthologs #237. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.stipitis:223

F6WVU8              	100.00%		A3LQ34              	100.00%
F6S2T0              	33.35%		
F6U3N6              	30.43%		
F6U4J4              	25.31%		
F6S2J4              	21.29%		
F6RZC1              	17.75%		
Bootstrap support for F6WVU8 as seed ortholog is 99%.
Bootstrap support for A3LQ34 as seed ortholog is 99%.

Group of orthologs #238. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.stipitis:126

F7B991              	100.00%		A3M0C2              	100.00%
Bootstrap support for F7B991 as seed ortholog is 100%.
Bootstrap support for A3M0C2 as seed ortholog is 99%.

Group of orthologs #239. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 S.stipitis:444

F6T957              	100.00%		A3LQ74              	100.00%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for A3LQ74 as seed ortholog is 100%.

Group of orthologs #240. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.stipitis:232

F6Z7L9              	100.00%		A3LSS9              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for A3LSS9 as seed ortholog is 100%.

Group of orthologs #241. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.stipitis:443

F7AX62              	100.00%		A3LYR5              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #242. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 S.stipitis:440

F6XH38              	100.00%		A3LWV8              	100.00%
F6ZGX7              	25.26%		
F6ZGZ0              	23.52%		
Bootstrap support for F6XH38 as seed ortholog is 100%.
Bootstrap support for A3LWV8 as seed ortholog is 100%.

Group of orthologs #243. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 S.stipitis:440

H2XJF2              	100.00%		A3LQL4              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for A3LQL4 as seed ortholog is 100%.

Group of orthologs #244. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 S.stipitis:68

F6RK00              	100.00%		A3LUC7              	100.00%
Bootstrap support for F6RK00 as seed ortholog is 100%.
Bootstrap support for A3LUC7 as seed ortholog is 82%.

Group of orthologs #245. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.stipitis:89

F6UJS3              	100.00%		A3LSI2              	100.00%
Bootstrap support for F6UJS3 as seed ortholog is 100%.
Bootstrap support for A3LSI2 as seed ortholog is 97%.

Group of orthologs #246. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.stipitis:338

F6TX56              	100.00%		A3LX50              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #247. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 S.stipitis:437

F6ZP25              	100.00%		A3GI60              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 100%.

Group of orthologs #248. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.stipitis:437

F7BBJ9              	100.00%		A3LYM2              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #249. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:162

F6Q0M2              	100.00%		A3LQA3              	100.00%
Bootstrap support for F6Q0M2 as seed ortholog is 94%.
Bootstrap support for A3LQA3 as seed ortholog is 99%.

Group of orthologs #250. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.stipitis:436

F6Q8D1              	100.00%		A3LTM0              	100.00%
Bootstrap support for F6Q8D1 as seed ortholog is 100%.
Bootstrap support for A3LTM0 as seed ortholog is 100%.

Group of orthologs #251. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.stipitis:435

F6UF05              	100.00%		A3LRA4              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for A3LRA4 as seed ortholog is 100%.

Group of orthologs #252. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.stipitis:434

H2XQD5              	100.00%		A3LWQ1              	100.00%
H2XVK2              	65.85%		
Bootstrap support for H2XQD5 as seed ortholog is 100%.
Bootstrap support for A3LWQ1 as seed ortholog is 100%.

Group of orthologs #253. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.stipitis:431

F6R8V3              	100.00%		A3GI11              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for A3GI11 as seed ortholog is 100%.

Group of orthologs #254. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 S.stipitis:430

H2XQE4              	100.00%		A3LS68              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for A3LS68 as seed ortholog is 100%.

Group of orthologs #255. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.stipitis:429

F7B7H5              	100.00%		A3LNL4              	100.00%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for A3LNL4 as seed ortholog is 100%.

Group of orthologs #256. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 S.stipitis:428

F7BJA3              	100.00%		A3GI67              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for A3GI67 as seed ortholog is 100%.

Group of orthologs #257. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.stipitis:196

F6UGA6              	100.00%		A3GGG1              	100.00%
Bootstrap support for F6UGA6 as seed ortholog is 99%.
Bootstrap support for A3GGG1 as seed ortholog is 99%.

Group of orthologs #258. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 S.stipitis:427

F6VZF6              	100.00%		A3LT38              	100.00%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for A3LT38 as seed ortholog is 100%.

Group of orthologs #259. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 S.stipitis:426

F6QI83              	100.00%		A3M056              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for A3M056 as seed ortholog is 100%.

Group of orthologs #260. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.stipitis:426

F6WRF3              	100.00%		A3LPA2              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for A3LPA2 as seed ortholog is 100%.

Group of orthologs #261. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.stipitis:220

F7AA42              	100.00%		A3LS22              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 100%.
Bootstrap support for A3LS22 as seed ortholog is 100%.

Group of orthologs #262. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.stipitis:370

F6UHI7              	100.00%		A3LNJ0              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for A3LNJ0 as seed ortholog is 100%.

Group of orthologs #263. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.stipitis:423

F7BBD1              	100.00%		A3LRK4              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for A3LRK4 as seed ortholog is 100%.

Group of orthologs #264. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 S.stipitis:421

F6UF57              	100.00%		A3LSY2              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #265. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.stipitis:418

F6PG92              	100.00%		A3GH36              	100.00%
Bootstrap support for F6PG92 as seed ortholog is 100%.
Bootstrap support for A3GH36 as seed ortholog is 100%.

Group of orthologs #266. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:195

F6RHH3              	100.00%		A3LRW3              	100.00%
Bootstrap support for F6RHH3 as seed ortholog is 91%.
Bootstrap support for A3LRW3 as seed ortholog is 99%.

Group of orthologs #267. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 S.stipitis:416

F7A5J2              	100.00%		A3GEZ8              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for A3GEZ8 as seed ortholog is 100%.

Group of orthologs #268. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 S.stipitis:240

H2XUE4              	100.00%		A3LUE7              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for A3LUE7 as seed ortholog is 100%.

Group of orthologs #269. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:155

F6UNP2              	100.00%		A3LMW8              	100.00%
Bootstrap support for F6UNP2 as seed ortholog is 98%.
Bootstrap support for A3LMW8 as seed ortholog is 99%.

Group of orthologs #270. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.stipitis:139

F6XQ16              	100.00%		A3GHJ5              	100.00%
Bootstrap support for F6XQ16 as seed ortholog is 56%.
Alternative seed ortholog is F6QIR4 (1 bits away from this cluster)
Bootstrap support for A3GHJ5 as seed ortholog is 99%.

Group of orthologs #271. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.stipitis:414

F6TTZ5              	100.00%		A3LQI7              	100.00%
                    	       		A3LRX6              	30.52%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for A3LQI7 as seed ortholog is 100%.

Group of orthologs #272. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.stipitis:117

H2XK85              	100.00%		A3LXC5              	100.00%
H2XLI5              	68.28%		
Bootstrap support for H2XK85 as seed ortholog is 100%.
Bootstrap support for A3LXC5 as seed ortholog is 99%.

Group of orthologs #273. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 S.stipitis:413

F6X4W9              	100.00%		A3LP67              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for A3LP67 as seed ortholog is 100%.

Group of orthologs #274. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 S.stipitis:413

F6ZVE7              	100.00%		A3LS47              	100.00%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for A3LS47 as seed ortholog is 100%.

Group of orthologs #275. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 S.stipitis:153

H2XLC1              	100.00%		A3LQF5              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for A3LQF5 as seed ortholog is 99%.

Group of orthologs #276. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.stipitis:270

F7B7G6              	100.00%		A3LV40              	100.00%
Bootstrap support for F7B7G6 as seed ortholog is 100%.
Bootstrap support for A3LV40 as seed ortholog is 100%.

Group of orthologs #277. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 S.stipitis:412

F6UDJ0              	100.00%		A3LTH8              	100.00%
Bootstrap support for F6UDJ0 as seed ortholog is 100%.
Bootstrap support for A3LTH8 as seed ortholog is 100%.

Group of orthologs #278. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 S.stipitis:412

F7AVN1              	100.00%		A3GGJ5              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #279. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.stipitis:411

F6Z6L6              	100.00%		A3GG31              	100.00%
Bootstrap support for F6Z6L6 as seed ortholog is 100%.
Bootstrap support for A3GG31 as seed ortholog is 100%.

Group of orthologs #280. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.stipitis:365

F6QI37              	100.00%		A3LNR3              	100.00%
Bootstrap support for F6QI37 as seed ortholog is 100%.
Bootstrap support for A3LNR3 as seed ortholog is 100%.

Group of orthologs #281. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.stipitis:329

F6SG33              	100.00%		A3M042              	100.00%
Bootstrap support for F6SG33 as seed ortholog is 100%.
Bootstrap support for A3M042 as seed ortholog is 100%.

Group of orthologs #282. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.stipitis:408

H2XLP3              	100.00%		A3LWP3              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for A3LWP3 as seed ortholog is 100%.

Group of orthologs #283. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:199

F6R5L0              	100.00%		A3GG91              	100.00%
                    	       		A3LTI2              	10.04%
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for A3GG91 as seed ortholog is 100%.

Group of orthologs #284. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.stipitis:176

F6YGC1              	100.00%		A3LSN3              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 99%.
Bootstrap support for A3LSN3 as seed ortholog is 99%.

Group of orthologs #285. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.stipitis:405

F7A4H8              	100.00%		A3LP98              	100.00%
Bootstrap support for F7A4H8 as seed ortholog is 86%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #286. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:170

F7AVB6              	100.00%		A3LR48              	100.00%
Bootstrap support for F7AVB6 as seed ortholog is 99%.
Bootstrap support for A3LR48 as seed ortholog is 99%.

Group of orthologs #287. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 S.stipitis:402

F6UTV1              	100.00%		A3GFF3              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #288. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.stipitis:401

F6RNR5              	100.00%		A3LYZ4              	100.00%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for A3LYZ4 as seed ortholog is 100%.

Group of orthologs #289. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.stipitis:401

Q1RLG4              	100.00%		A3LUK5              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for A3LUK5 as seed ortholog is 100%.

Group of orthologs #290. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.stipitis:194

F6XBC5              	100.00%		A3GFR9              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for A3GFR9 as seed ortholog is 99%.

Group of orthologs #291. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:247

F6RCR9              	100.00%		A3LZ69              	100.00%
Bootstrap support for F6RCR9 as seed ortholog is 99%.
Bootstrap support for A3LZ69 as seed ortholog is 100%.

Group of orthologs #292. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.stipitis:399

F6S6E8              	100.00%		A3LTA9              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for A3LTA9 as seed ortholog is 100%.

Group of orthologs #293. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.stipitis:399

F6Z3U3              	100.00%		A3GG22              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for A3GG22 as seed ortholog is 100%.

Group of orthologs #294. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.stipitis:326

F6XCG6              	100.00%		A3LUK4              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for A3LUK4 as seed ortholog is 100%.

Group of orthologs #295. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.stipitis:399

F6ZWW6              	100.00%		A3LZK5              	100.00%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for A3LZK5 as seed ortholog is 100%.

Group of orthologs #296. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.stipitis:163

H2XVN3              	100.00%		A3LWK4              	100.00%
Bootstrap support for H2XVN3 as seed ortholog is 100%.
Bootstrap support for A3LWK4 as seed ortholog is 99%.

Group of orthologs #297. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.stipitis:297

F6SUM0              	100.00%		A3LN65              	100.00%
F7AAH8              	41.31%		A3LVU8              	23.75%
Bootstrap support for F6SUM0 as seed ortholog is 100%.
Bootstrap support for A3LN65 as seed ortholog is 100%.

Group of orthologs #298. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.stipitis:397

F6TBI8              	100.00%		A3GID9              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for A3GID9 as seed ortholog is 100%.

Group of orthologs #299. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.stipitis:397

F6XP34              	100.00%		A3M0A1              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for A3M0A1 as seed ortholog is 100%.

Group of orthologs #300. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.stipitis:108

F6YWY7              	100.00%		A3LZ36              	100.00%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for A3LZ36 as seed ortholog is 99%.

Group of orthologs #301. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.stipitis:127

F6TLX8              	100.00%		A3LWJ2              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for A3LWJ2 as seed ortholog is 99%.

Group of orthologs #302. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.stipitis:396

F6U8C7              	100.00%		A3LY29              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for A3LY29 as seed ortholog is 100%.

Group of orthologs #303. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.stipitis:190

F6S4Q0              	100.00%		A3LUB4              	100.00%
                    	       		A3LPT7              	24.30%
Bootstrap support for F6S4Q0 as seed ortholog is 99%.
Bootstrap support for A3LUB4 as seed ortholog is 100%.

Group of orthologs #304. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.stipitis:125

F6SLC8              	100.00%		A3GG17              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for A3GG17 as seed ortholog is 99%.

Group of orthologs #305. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.stipitis:394

F6VYC6              	100.00%		A3GGK9              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for A3GGK9 as seed ortholog is 100%.

Group of orthologs #306. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.stipitis:394

F6QF37              	100.00%		A3LYS9              	100.00%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for A3LYS9 as seed ortholog is 100%.

Group of orthologs #307. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.stipitis:394

F6WAD4              	100.00%		A3GI18              	100.00%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for A3GI18 as seed ortholog is 100%.

Group of orthologs #308. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 S.stipitis:391

F6TD07              	100.00%		A3LUH7              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for A3LUH7 as seed ortholog is 100%.

Group of orthologs #309. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.stipitis:391

H2XZM3              	100.00%		A3GGB3              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #310. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.stipitis:389

H2XJK0              	100.00%		A3LZ97              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for A3LZ97 as seed ortholog is 100%.

Group of orthologs #311. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.stipitis:388

F6RK88              	100.00%		A3GF58              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for A3GF58 as seed ortholog is 100%.

Group of orthologs #312. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.stipitis:388

F6YX67              	100.00%		A3LUU1              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for A3LUU1 as seed ortholog is 100%.

Group of orthologs #313. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.stipitis:388

F6XKA2              	100.00%		A3M075              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for A3M075 as seed ortholog is 100%.

Group of orthologs #314. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.stipitis:386

F6VUM2              	100.00%		A3M037              	100.00%
Bootstrap support for F6VUM2 as seed ortholog is 100%.
Bootstrap support for A3M037 as seed ortholog is 100%.

Group of orthologs #315. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 S.stipitis:385

F6WNR2              	100.00%		A3LP90              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for A3LP90 as seed ortholog is 100%.

Group of orthologs #316. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.stipitis:384

F6T1J8              	100.00%		A3LTK0              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 99%.
Bootstrap support for A3LTK0 as seed ortholog is 100%.

Group of orthologs #317. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.stipitis:381

F6Q9C5              	100.00%		A3GGE7              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 100%.
Bootstrap support for A3GGE7 as seed ortholog is 100%.

Group of orthologs #318. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.stipitis:268

F6ZCE0              	100.00%		A3LVI4              	100.00%
Bootstrap support for F6ZCE0 as seed ortholog is 100%.
Bootstrap support for A3LVI4 as seed ortholog is 100%.

Group of orthologs #319. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 S.stipitis:379

F6YGJ7              	100.00%		A3LW56              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for A3LW56 as seed ortholog is 100%.

Group of orthologs #320. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.stipitis:379

F7AZV0              	100.00%		A3LYY4              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #321. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 S.stipitis:308

H2Y164              	100.00%		A3GFH8              	100.00%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for A3GFH8 as seed ortholog is 100%.

Group of orthologs #322. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 S.stipitis:377

F6Q096              	100.00%		A3GFN6              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for A3GFN6 as seed ortholog is 100%.

Group of orthologs #323. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 S.stipitis:377

F6ZVC8              	100.00%		A3GF66              	100.00%
Bootstrap support for F6ZVC8 as seed ortholog is 100%.
Bootstrap support for A3GF66 as seed ortholog is 100%.

Group of orthologs #324. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 S.stipitis:377

F6XQ09              	100.00%		A3LUZ6              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for A3LUZ6 as seed ortholog is 100%.

Group of orthologs #325. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.stipitis:377

H2XYE1              	100.00%		A3LV77              	100.00%
Bootstrap support for H2XYE1 as seed ortholog is 99%.
Bootstrap support for A3LV77 as seed ortholog is 100%.

Group of orthologs #326. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.stipitis:238

F6XTY4              	100.00%		A3GH91              	100.00%
Bootstrap support for F6XTY4 as seed ortholog is 100%.
Bootstrap support for A3GH91 as seed ortholog is 100%.

Group of orthologs #327. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.stipitis:376

F7AQA9              	100.00%		A3LPT6              	100.00%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for A3LPT6 as seed ortholog is 100%.

Group of orthologs #328. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.stipitis:107

F6PKL5              	100.00%		A3M086              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 100%.
Bootstrap support for A3M086 as seed ortholog is 98%.

Group of orthologs #329. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.stipitis:330

F6SK29              	100.00%		A3LWH7              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for A3LWH7 as seed ortholog is 100%.

Group of orthologs #330. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.stipitis:374

F6ZHM4              	100.00%		A3LY41              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #331. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:127

F7A1V5              	100.00%		A3LNL1              	100.00%
Bootstrap support for F7A1V5 as seed ortholog is 99%.
Bootstrap support for A3LNL1 as seed ortholog is 99%.

Group of orthologs #332. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.stipitis:51

Q4H3L5              	100.00%		A3GF15              	100.00%
                    	       		A3LY05              	8.77%
Bootstrap support for Q4H3L5 as seed ortholog is 99%.
Bootstrap support for A3GF15 as seed ortholog is 92%.

Group of orthologs #333. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.stipitis:372

F6PWP3              	100.00%		A3LYF4              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for A3LYF4 as seed ortholog is 100%.

Group of orthologs #334. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.stipitis:372

F6W9I8              	100.00%		A3LTA3              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 99%.
Bootstrap support for A3LTA3 as seed ortholog is 100%.

Group of orthologs #335. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.stipitis:372

F6ZX12              	100.00%		A3M027              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #336. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.stipitis:19

F6YRI1              	100.00%		A3LS12              	100.00%
Bootstrap support for F6YRI1 as seed ortholog is 99%.
Bootstrap support for A3LS12 as seed ortholog is 63%.
Alternative seed ortholog is A3LPP7 (19 bits away from this cluster)

Group of orthologs #337. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.stipitis:370

F6R2U8              	100.00%		A3LW59              	100.00%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for A3LW59 as seed ortholog is 100%.

Group of orthologs #338. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.stipitis:370

F6W1Y5              	100.00%		A3LP44              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for A3LP44 as seed ortholog is 100%.

Group of orthologs #339. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.stipitis:370

F7B0I1              	100.00%		A3LTN8              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for A3LTN8 as seed ortholog is 100%.

Group of orthologs #340. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 S.stipitis:369

F6SPZ6              	100.00%		A3LX91              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for A3LX91 as seed ortholog is 100%.

Group of orthologs #341. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.stipitis:366

F6TEN3              	100.00%		A3LMX4              	100.00%
F6W3N0              	5.69%		
Bootstrap support for F6TEN3 as seed ortholog is 100%.
Bootstrap support for A3LMX4 as seed ortholog is 100%.

Group of orthologs #342. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.stipitis:212

F6TZU9              	100.00%		A3LN13              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for A3LN13 as seed ortholog is 99%.

Group of orthologs #343. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.stipitis:366

F6RCY1              	100.00%		A3LUX2              	100.00%
Bootstrap support for F6RCY1 as seed ortholog is 100%.
Bootstrap support for A3LUX2 as seed ortholog is 100%.

Group of orthologs #344. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.stipitis:366

F6YIU2              	100.00%		A3GFK8              	100.00%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for A3GFK8 as seed ortholog is 100%.

Group of orthologs #345. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.stipitis:363

F6VT08              	100.00%		A3GEX9              	100.00%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #346. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.stipitis:363

F7B4V9              	100.00%		A3LT44              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for A3LT44 as seed ortholog is 100%.

Group of orthologs #347. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.stipitis:363

H2XZG0              	100.00%		A3GHA2              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for A3GHA2 as seed ortholog is 100%.

Group of orthologs #348. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.stipitis:362

F6PLA8              	100.00%		A3LTS9              	100.00%
                    	       		A3LPX9              	26.81%
Bootstrap support for F6PLA8 as seed ortholog is 84%.
Bootstrap support for A3LTS9 as seed ortholog is 100%.

Group of orthologs #349. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:177

F6SDQ3              	100.00%		A3LP87              	100.00%
Bootstrap support for F6SDQ3 as seed ortholog is 100%.
Bootstrap support for A3LP87 as seed ortholog is 99%.

Group of orthologs #350. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.stipitis:362

F6V136              	100.00%		A3GGN7              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for A3GGN7 as seed ortholog is 100%.

Group of orthologs #351. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.stipitis:361

F6SQQ1              	100.00%		A3LYX3              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for A3LYX3 as seed ortholog is 100%.

Group of orthologs #352. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.stipitis:209

F6Q7A6              	100.00%		A3GFE9              	100.00%
H2XY01              	8.31%		
Bootstrap support for F6Q7A6 as seed ortholog is 100%.
Bootstrap support for A3GFE9 as seed ortholog is 100%.

Group of orthologs #353. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 S.stipitis:243

F6XQD4              	100.00%		A3LTV2              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for A3LTV2 as seed ortholog is 100%.

Group of orthologs #354. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 S.stipitis:360

F6XMM6              	100.00%		A3M0D0              	100.00%
Bootstrap support for F6XMM6 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #355. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.stipitis:86

F6XIQ9              	100.00%		A3GGR0              	100.00%
Bootstrap support for F6XIQ9 as seed ortholog is 100%.
Bootstrap support for A3GGR0 as seed ortholog is 98%.

Group of orthologs #356. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.stipitis:359

F6ZZJ8              	100.00%		A3LT23              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for A3LT23 as seed ortholog is 100%.

Group of orthologs #357. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.stipitis:358

F6WKD5              	100.00%		A3LWR7              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 99%.
Bootstrap support for A3LWR7 as seed ortholog is 100%.

Group of orthologs #358. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.stipitis:199

F7A713              	100.00%		A3LWR2              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for A3LWR2 as seed ortholog is 99%.

Group of orthologs #359. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.stipitis:357

F6PX61              	100.00%		A3LRB4              	100.00%
Bootstrap support for F6PX61 as seed ortholog is 100%.
Bootstrap support for A3LRB4 as seed ortholog is 100%.

Group of orthologs #360. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.stipitis:357

F6X056              	100.00%		A3LQJ7              	100.00%
Bootstrap support for F6X056 as seed ortholog is 100%.
Bootstrap support for A3LQJ7 as seed ortholog is 100%.

Group of orthologs #361. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.stipitis:356

F6WWW4              	100.00%		A3LVQ0              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for A3LVQ0 as seed ortholog is 100%.

Group of orthologs #362. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 S.stipitis:249

F6SYF4              	100.00%		A3LPY6              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for A3LPY6 as seed ortholog is 100%.

Group of orthologs #363. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.stipitis:354

F6UE78              	100.00%		A3LRQ5              	100.00%
Bootstrap support for F6UE78 as seed ortholog is 100%.
Bootstrap support for A3LRQ5 as seed ortholog is 100%.

Group of orthologs #364. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.stipitis:353

F6S9Y0              	100.00%		A3LR63              	100.00%
Bootstrap support for F6S9Y0 as seed ortholog is 76%.
Bootstrap support for A3LR63 as seed ortholog is 100%.

Group of orthologs #365. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.stipitis:353

F6W453              	100.00%		A3LQ91              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for A3LQ91 as seed ortholog is 100%.

Group of orthologs #366. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.stipitis:353

F6X600              	100.00%		A3LW87              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for A3LW87 as seed ortholog is 100%.

Group of orthologs #367. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 S.stipitis:352

F6QWQ4              	100.00%		A3LYR4              	100.00%
Bootstrap support for F6QWQ4 as seed ortholog is 32%.
Alternative seed ortholog is F6WPG2 (21 bits away from this cluster)
Bootstrap support for A3LYR4 as seed ortholog is 100%.

Group of orthologs #368. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.stipitis:352

F6SSW4              	100.00%		A3LZS7              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #369. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.stipitis:166

F6SUS9              	100.00%		A3LNB3              	100.00%
Bootstrap support for F6SUS9 as seed ortholog is 100%.
Bootstrap support for A3LNB3 as seed ortholog is 99%.

Group of orthologs #370. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:349

F6TDZ5              	100.00%		A3LMT4              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 99%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #371. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.stipitis:73

F6TLL4              	100.00%		A3LYB2              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for A3LYB2 as seed ortholog is 99%.

Group of orthologs #372. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.stipitis:348

H2XKA9              	100.00%		A3LN55              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for A3LN55 as seed ortholog is 100%.

Group of orthologs #373. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.stipitis:347

F6PRK2              	100.00%		A3LR29              	100.00%
Bootstrap support for F6PRK2 as seed ortholog is 100%.
Bootstrap support for A3LR29 as seed ortholog is 100%.

Group of orthologs #374. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.stipitis:347

F7B7E9              	100.00%		A3LNS6              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 100%.
Bootstrap support for A3LNS6 as seed ortholog is 100%.

Group of orthologs #375. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:190

F6ZUU0              	100.00%		A3LX02              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 99%.
Bootstrap support for A3LX02 as seed ortholog is 99%.

Group of orthologs #376. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 S.stipitis:345

H2XL83              	100.00%		A3LNJ9              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for A3LNJ9 as seed ortholog is 100%.

Group of orthologs #377. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 S.stipitis:87

F7AJP1              	100.00%		A3LZ01              	100.00%
Bootstrap support for F7AJP1 as seed ortholog is 100%.
Bootstrap support for A3LZ01 as seed ortholog is 98%.

Group of orthologs #378. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.stipitis:344

F6WLN1              	100.00%		A3LWI4              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for A3LWI4 as seed ortholog is 100%.

Group of orthologs #379. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:103

H2Y169              	100.00%		A3LXE1              	100.00%
Bootstrap support for H2Y169 as seed ortholog is 94%.
Bootstrap support for A3LXE1 as seed ortholog is 99%.

Group of orthologs #380. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.stipitis:342

F6ZLM3              	100.00%		A3LWF9              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for A3LWF9 as seed ortholog is 100%.

Group of orthologs #381. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.stipitis:342

H2XL64              	100.00%		A3LSE0              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for A3LSE0 as seed ortholog is 100%.

Group of orthologs #382. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.stipitis:342

H2XPV7              	100.00%		A3LYM1              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for A3LYM1 as seed ortholog is 100%.

Group of orthologs #383. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:119

F6PH07              	100.00%		A3LYD5              	100.00%
H2XXD3              	5.29%		A3LPK9              	44.79%
Bootstrap support for F6PH07 as seed ortholog is 99%.
Bootstrap support for A3LYD5 as seed ortholog is 99%.

Group of orthologs #384. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.stipitis:341

F6YVU0              	100.00%		A3GGB7              	100.00%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for A3GGB7 as seed ortholog is 100%.

Group of orthologs #385. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.stipitis:341

F6XDI5              	100.00%		A3LSU9              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for A3LSU9 as seed ortholog is 100%.

Group of orthologs #386. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.stipitis:134

F6TAK3              	100.00%		A3GF81              	100.00%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for A3GF81 as seed ortholog is 99%.

Group of orthologs #387. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.stipitis:339

F6XK22              	100.00%		A3GH62              	100.00%
Bootstrap support for F6XK22 as seed ortholog is 100%.
Bootstrap support for A3GH62 as seed ortholog is 100%.

Group of orthologs #388. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.stipitis:157

F6ZRR5              	100.00%		A3GHW9              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 99%.
Bootstrap support for A3GHW9 as seed ortholog is 99%.

Group of orthologs #389. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.stipitis:339

F6XKQ1              	100.00%		A3LTY5              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for A3LTY5 as seed ortholog is 100%.

Group of orthologs #390. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:339

F7BH52              	100.00%		A3LSC7              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 98%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #391. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.stipitis:339

H2Y1U3              	100.00%		A3LWI3              	100.00%
Bootstrap support for H2Y1U3 as seed ortholog is 100%.
Bootstrap support for A3LWI3 as seed ortholog is 100%.

Group of orthologs #392. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.stipitis:338

F6XL66              	100.00%		A3GG12              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for A3GG12 as seed ortholog is 100%.

Group of orthologs #393. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.stipitis:338

F6TDD6              	100.00%		A3LV82              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for A3LV82 as seed ortholog is 100%.

Group of orthologs #394. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.stipitis:157

F6UBT3              	100.00%		A3LXK3              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for A3LXK3 as seed ortholog is 99%.

Group of orthologs #395. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.stipitis:337

F6TSV2              	100.00%		A3M001              	100.00%
Bootstrap support for F6TSV2 as seed ortholog is 100%.
Bootstrap support for A3M001 as seed ortholog is 100%.

Group of orthologs #396. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.stipitis:337

F7ABF6              	100.00%		A3LWS6              	100.00%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for A3LWS6 as seed ortholog is 100%.

Group of orthologs #397. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 S.stipitis:335

F7BHB2              	100.00%		A3LVQ3              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for A3LVQ3 as seed ortholog is 100%.

Group of orthologs #398. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 S.stipitis:335

F7B5P4              	100.00%		A3LZA5              	100.00%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for A3LZA5 as seed ortholog is 100%.

Group of orthologs #399. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:333

F6WL19              	100.00%		A3LXG8              	100.00%
F6TNW3              	17.37%		
Bootstrap support for F6WL19 as seed ortholog is 99%.
Bootstrap support for A3LXG8 as seed ortholog is 100%.

Group of orthologs #400. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.stipitis:331

F6TIU3              	100.00%		A3LX18              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 100%.
Bootstrap support for A3LX18 as seed ortholog is 100%.

Group of orthologs #401. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.stipitis:330

F6YQR4              	100.00%		A3LP78              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for A3LP78 as seed ortholog is 100%.

Group of orthologs #402. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:329

F6W685              	100.00%		A3M0C1              	100.00%
Bootstrap support for F6W685 as seed ortholog is 91%.
Bootstrap support for A3M0C1 as seed ortholog is 100%.

Group of orthologs #403. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:120

F6UK45              	100.00%		A3LPQ3              	100.00%
Bootstrap support for F6UK45 as seed ortholog is 91%.
Bootstrap support for A3LPQ3 as seed ortholog is 99%.

Group of orthologs #404. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.stipitis:51

F6SZU4              	100.00%		A3LVT4              	100.00%
F6T060              	75.68%		A3LT24              	30.96%
                    	       		A3LPC6              	28.20%
                    	       		A3LZE8              	18.15%
                    	       		A3LPV7              	17.08%
Bootstrap support for F6SZU4 as seed ortholog is 99%.
Bootstrap support for A3LVT4 as seed ortholog is 82%.

Group of orthologs #405. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.stipitis:327

F6QE47              	100.00%		A3GFK2              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for A3GFK2 as seed ortholog is 100%.

Group of orthologs #406. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.stipitis:327

H2XP51              	100.00%		A3GG07              	100.00%
Bootstrap support for H2XP51 as seed ortholog is 100%.
Bootstrap support for A3GG07 as seed ortholog is 100%.

Group of orthologs #407. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.stipitis:177

F6YNQ3              	100.00%		A3LYS8              	100.00%
Bootstrap support for F6YNQ3 as seed ortholog is 100%.
Bootstrap support for A3LYS8 as seed ortholog is 100%.

Group of orthologs #408. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.stipitis:52

Q8WSS1              	100.00%		A3LQM3              	100.00%
H2Y1Q1              	33.76%		
F6PR32              	32.73%		
Bootstrap support for Q8WSS1 as seed ortholog is 92%.
Bootstrap support for A3LQM3 as seed ortholog is 87%.

Group of orthologs #409. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.stipitis:324

F7A1S8              	100.00%		A3LQF9              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for A3LQF9 as seed ortholog is 100%.

Group of orthologs #410. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.stipitis:324

H2Y2G1              	100.00%		A3LQ06              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for A3LQ06 as seed ortholog is 100%.

Group of orthologs #411. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 S.stipitis:323

F6UGN5              	100.00%		A3LSA9              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for A3LSA9 as seed ortholog is 100%.

Group of orthologs #412. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 S.stipitis:323

H2XVC3              	100.00%		A3LWI9              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for A3LWI9 as seed ortholog is 100%.

Group of orthologs #413. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.stipitis:322

F6W8G0              	100.00%		A3GI13              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for A3GI13 as seed ortholog is 100%.

Group of orthologs #414. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.stipitis:227

F6X4B8              	100.00%		A3GI26              	100.00%
Bootstrap support for F6X4B8 as seed ortholog is 100%.
Bootstrap support for A3GI26 as seed ortholog is 99%.

Group of orthologs #415. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:322

F7ADN1              	100.00%		A3M0D4              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 99%.
Bootstrap support for A3M0D4 as seed ortholog is 100%.

Group of orthologs #416. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.stipitis:244

F6V6M0              	100.00%		A3GH67              	100.00%
Bootstrap support for F6V6M0 as seed ortholog is 100%.
Bootstrap support for A3GH67 as seed ortholog is 100%.

Group of orthologs #417. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.stipitis:321

F6XDT3              	100.00%		A3LRF5              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for A3LRF5 as seed ortholog is 100%.

Group of orthologs #418. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 S.stipitis:320

F6QCF9              	100.00%		A3GFK3              	100.00%
F7AUQ0              	25.10%		
H2Y2S0              	18.95%		
F6Q8W5              	6.67%		
F6X5E1              	5.68%		
F6SKF5              	5.45%		
Bootstrap support for F6QCF9 as seed ortholog is 100%.
Bootstrap support for A3GFK3 as seed ortholog is 100%.

Group of orthologs #419. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.stipitis:319

F6SBG8              	100.00%		A3LTF5              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 99%.
Bootstrap support for A3LTF5 as seed ortholog is 100%.

Group of orthologs #420. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.stipitis:319

F6UET6              	100.00%		A3LZI8              	100.00%
Bootstrap support for F6UET6 as seed ortholog is 100%.
Bootstrap support for A3LZI8 as seed ortholog is 100%.

Group of orthologs #421. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.stipitis:319

F7BLS5              	100.00%		A3LRF1              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for A3LRF1 as seed ortholog is 100%.

Group of orthologs #422. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.stipitis:127

F7ARV5              	100.00%		A3LXB7              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 99%.
Bootstrap support for A3LXB7 as seed ortholog is 99%.

Group of orthologs #423. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.stipitis:319

H2Y0P6              	100.00%		A3LRR5              	100.00%
Bootstrap support for H2Y0P6 as seed ortholog is 99%.
Bootstrap support for A3LRR5 as seed ortholog is 100%.

Group of orthologs #424. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 S.stipitis:68

F6PN41              	100.00%		A3LTU4              	100.00%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 97%.

Group of orthologs #425. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.stipitis:317

F6XUX1              	100.00%		A3LVU4              	100.00%
                    	       		A3LNY1              	58.89%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for A3LVU4 as seed ortholog is 100%.

Group of orthologs #426. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:317

F6XMP8              	100.00%		A3LXL0              	100.00%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for A3LXL0 as seed ortholog is 100%.

Group of orthologs #427. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.stipitis:317

F6YHB0              	100.00%		A3LY03              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for A3LY03 as seed ortholog is 100%.

Group of orthologs #428. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:317

H2Y323              	100.00%		A3LZR6              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 95%.
Bootstrap support for A3LZR6 as seed ortholog is 100%.

Group of orthologs #429. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:158

F6RKK1              	100.00%		A3LU60              	100.00%
Bootstrap support for F6RKK1 as seed ortholog is 81%.
Bootstrap support for A3LU60 as seed ortholog is 99%.

Group of orthologs #430. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F6WUM1              	100.00%		A3LSG9              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for A3LSG9 as seed ortholog is 100%.

Group of orthologs #431. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F6Z7S0              	100.00%		A3LN97              	100.00%
Bootstrap support for F6Z7S0 as seed ortholog is 100%.
Bootstrap support for A3LN97 as seed ortholog is 100%.

Group of orthologs #432. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F7A172              	100.00%		A3LPI4              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for A3LPI4 as seed ortholog is 100%.

Group of orthologs #433. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F6ZU97              	100.00%		A3LQ43              	100.00%
Bootstrap support for F6ZU97 as seed ortholog is 100%.
Bootstrap support for A3LQ43 as seed ortholog is 100%.

Group of orthologs #434. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F6ZYI6              	100.00%		A3LX01              	100.00%
Bootstrap support for F6ZYI6 as seed ortholog is 100%.
Bootstrap support for A3LX01 as seed ortholog is 100%.

Group of orthologs #435. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F7ATT1              	100.00%		A3LWJ5              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #436. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.stipitis:316

F7A1R5              	100.00%		A3LYT2              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for A3LYT2 as seed ortholog is 100%.

Group of orthologs #437. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.stipitis:315

F6WAZ5              	100.00%		A3GI64              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for A3GI64 as seed ortholog is 100%.

Group of orthologs #438. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.stipitis:50

F6SCN2              	100.00%		A3GGD9              	100.00%
Bootstrap support for F6SCN2 as seed ortholog is 100%.
Bootstrap support for A3GGD9 as seed ortholog is 92%.

Group of orthologs #439. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.stipitis:314

F6WDL0              	100.00%		A3GHH1              	100.00%
Bootstrap support for F6WDL0 as seed ortholog is 57%.
Alternative seed ortholog is F6ST44 (9 bits away from this cluster)
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #440. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.stipitis:314

F6UIE4              	100.00%		A3LVW0              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 99%.
Bootstrap support for A3LVW0 as seed ortholog is 100%.

Group of orthologs #441. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:313

F6U7Z2              	100.00%		A3GH07              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 97%.
Bootstrap support for A3GH07 as seed ortholog is 100%.

Group of orthologs #442. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.stipitis:313

F6UFF5              	100.00%		A3LQH4              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 100%.
Bootstrap support for A3LQH4 as seed ortholog is 100%.

Group of orthologs #443. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.stipitis:313

F7AX37              	100.00%		A3LN62              	100.00%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for A3LN62 as seed ortholog is 100%.

Group of orthologs #444. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.stipitis:311

F6X753              	100.00%		A3LY04              	100.00%
L7N0R8              	15.86%		
Bootstrap support for F6X753 as seed ortholog is 92%.
Bootstrap support for A3LY04 as seed ortholog is 100%.

Group of orthologs #445. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.stipitis:212

F6TQG1              	100.00%		A3GEX4              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for A3GEX4 as seed ortholog is 100%.

Group of orthologs #446. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.stipitis:311

F6X3Q7              	100.00%		A3GEZ0              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for A3GEZ0 as seed ortholog is 100%.

Group of orthologs #447. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.stipitis:311

F6YM78              	100.00%		A3LPJ7              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for A3LPJ7 as seed ortholog is 100%.

Group of orthologs #448. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.stipitis:239

L7N0S3              	100.00%		A3LQB6              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 99%.
Bootstrap support for A3LQB6 as seed ortholog is 100%.

Group of orthologs #449. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.stipitis:310

H2XUA5              	100.00%		A3LTL9              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for A3LTL9 as seed ortholog is 100%.

Group of orthologs #450. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:61

H2XNI1              	100.00%		A3GG88              	100.00%
F6UEZ5              	13.77%		
Bootstrap support for H2XNI1 as seed ortholog is 95%.
Bootstrap support for A3GG88 as seed ortholog is 95%.

Group of orthologs #451. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.stipitis:309

F7BDV2              	100.00%		A3LZZ8              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for A3LZZ8 as seed ortholog is 100%.

Group of orthologs #452. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.stipitis:128

H2Y2C6              	100.00%		A3LPR5              	100.00%
Bootstrap support for H2Y2C6 as seed ortholog is 52%.
Alternative seed ortholog is F6W8D0 (10 bits away from this cluster)
Bootstrap support for A3LPR5 as seed ortholog is 98%.

Group of orthologs #453. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.stipitis:227

F6RA65              	100.00%		A3LZ16              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for A3LZ16 as seed ortholog is 100%.

Group of orthologs #454. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.stipitis:126

H2Y040              	100.00%		A3LYV6              	100.00%
                    	       		A3LZR8              	100.00%
Bootstrap support for H2Y040 as seed ortholog is 85%.
Bootstrap support for A3LYV6 as seed ortholog is 100%.
Bootstrap support for A3LZR8 as seed ortholog is 100%.

Group of orthologs #455. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.stipitis:193

F6ZU35              	100.00%		A3LPA6              	100.00%
Bootstrap support for F6ZU35 as seed ortholog is 100%.
Bootstrap support for A3LPA6 as seed ortholog is 99%.

Group of orthologs #456. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.stipitis:307

H2Y3D5              	100.00%		A3GHT7              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #457. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.stipitis:307

H2Y288              	100.00%		A3LSG3              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for A3LSG3 as seed ortholog is 100%.

Group of orthologs #458. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 S.stipitis:306

F6TGX2              	100.00%		A3LTQ4              	100.00%
Bootstrap support for F6TGX2 as seed ortholog is 100%.
Bootstrap support for A3LTQ4 as seed ortholog is 100%.

Group of orthologs #459. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:220

F6U1E2              	100.00%		A3GH05              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 100%.
Bootstrap support for A3GH05 as seed ortholog is 100%.

Group of orthologs #460. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:76

F6S4F7              	100.00%		A3LQD3              	100.00%
Bootstrap support for F6S4F7 as seed ortholog is 100%.
Bootstrap support for A3LQD3 as seed ortholog is 97%.

Group of orthologs #461. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.stipitis:304

F6WAW7              	100.00%		A3LMS2              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for A3LMS2 as seed ortholog is 100%.

Group of orthologs #462. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:304

F6XWW8              	100.00%		A3LTU9              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 91%.
Bootstrap support for A3LTU9 as seed ortholog is 100%.

Group of orthologs #463. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.stipitis:304

H2XYW0              	100.00%		A3LVD0              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for A3LVD0 as seed ortholog is 100%.

Group of orthologs #464. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 S.stipitis:303

F6PJ70              	100.00%		A3LQK0              	100.00%
F6XSL1              	5.29%		
Bootstrap support for F6PJ70 as seed ortholog is 69%.
Alternative seed ortholog is F7BP11 (32 bits away from this cluster)
Bootstrap support for A3LQK0 as seed ortholog is 100%.

Group of orthologs #465. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.stipitis:303

F6VQ10              	100.00%		A3LUL0              	100.00%
Q4H2R2              	100.00%		
Bootstrap support for F6VQ10 as seed ortholog is 100%.
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for A3LUL0 as seed ortholog is 100%.

Group of orthologs #466. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.stipitis:303

F6RJV3              	100.00%		A3LWN0              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for A3LWN0 as seed ortholog is 100%.

Group of orthologs #467. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.stipitis:303

F6VFC5              	100.00%		A3LQV2              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for A3LQV2 as seed ortholog is 100%.

Group of orthologs #468. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.stipitis:303

F6X2C4              	100.00%		A3LNW3              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for A3LNW3 as seed ortholog is 100%.

Group of orthologs #469. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.stipitis:303

F6YEQ8              	100.00%		A3LR90              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for A3LR90 as seed ortholog is 100%.

Group of orthologs #470. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.stipitis:302

H2XWR9              	100.00%		A3GI83              	100.00%
                    	       		A3GEX0              	18.17%
                    	       		A3LTY9              	17.59%
Bootstrap support for H2XWR9 as seed ortholog is 100%.
Bootstrap support for A3GI83 as seed ortholog is 100%.

Group of orthologs #471. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:71

H2XZY0              	100.00%		A3LNI3              	100.00%
Q1RPX1              	5.97%		
Bootstrap support for H2XZY0 as seed ortholog is 96%.
Bootstrap support for A3LNI3 as seed ortholog is 93%.

Group of orthologs #472. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.stipitis:113

F6R4B5              	100.00%		A3LTL8              	100.00%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for A3LTL8 as seed ortholog is 97%.

Group of orthologs #473. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:178

H2XL87              	100.00%		A3LRF3              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 99%.
Bootstrap support for A3LRF3 as seed ortholog is 100%.

Group of orthologs #474. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.stipitis:300

F6U8B5              	100.00%		A3LPT4              	100.00%
Bootstrap support for F6U8B5 as seed ortholog is 100%.
Bootstrap support for A3LPT4 as seed ortholog is 100%.

Group of orthologs #475. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.stipitis:130

F7AXN3              	100.00%		A3GG51              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 99%.
Bootstrap support for A3GG51 as seed ortholog is 99%.

Group of orthologs #476. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.stipitis:300

H2Y0R2              	100.00%		A3LVH9              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for A3LVH9 as seed ortholog is 100%.

Group of orthologs #477. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.stipitis:299

F6TQ69              	100.00%		A3LSW5              	100.00%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for A3LSW5 as seed ortholog is 100%.

Group of orthologs #478. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.stipitis:298

H2XP90              	100.00%		A3LQD7              	100.00%
F7A2G6              	23.41%		
H2XYS1              	10.27%		
Bootstrap support for H2XP90 as seed ortholog is 100%.
Bootstrap support for A3LQD7 as seed ortholog is 100%.

Group of orthologs #479. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.stipitis:298

F6RN60              	100.00%		A3LX15              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for A3LX15 as seed ortholog is 100%.

Group of orthologs #480. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.stipitis:298

F6W1A6              	100.00%		A3LR21              	100.00%
Bootstrap support for F6W1A6 as seed ortholog is 100%.
Bootstrap support for A3LR21 as seed ortholog is 100%.

Group of orthologs #481. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.stipitis:298

H2XWE4              	100.00%		A3GFH5              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #482. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.stipitis:297

F6S902              	100.00%		A3LUT4              	100.00%
Bootstrap support for F6S902 as seed ortholog is 100%.
Bootstrap support for A3LUT4 as seed ortholog is 100%.

Group of orthologs #483. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.stipitis:297

F6VKI2              	100.00%		A3LYP7              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for A3LYP7 as seed ortholog is 100%.

Group of orthologs #484. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.stipitis:296

F6Z1E3              	100.00%		A3LX67              	100.00%
                    	       		A3LUW5              	87.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for A3LX67 as seed ortholog is 100%.

Group of orthologs #485. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.stipitis:296

F6VNW9              	100.00%		A3LX59              	100.00%
Bootstrap support for F6VNW9 as seed ortholog is 61%.
Alternative seed ortholog is F6ZBI9 (14 bits away from this cluster)
Bootstrap support for A3LX59 as seed ortholog is 100%.

Group of orthologs #486. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.stipitis:296

F7AMR5              	100.00%		A3GGD3              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for A3GGD3 as seed ortholog is 100%.

Group of orthologs #487. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.stipitis:295

F6U2U3              	100.00%		A3LQ84              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for A3LQ84 as seed ortholog is 100%.

Group of orthologs #488. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:119

F6S0X0              	100.00%		A3LWH3              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 99%.
Bootstrap support for A3LWH3 as seed ortholog is 99%.

Group of orthologs #489. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.stipitis:295

F6YIY8              	100.00%		A3LSB1              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for A3LSB1 as seed ortholog is 100%.

Group of orthologs #490. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.stipitis:36

F7BAT7              	100.00%		A3LPV0              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for A3LPV0 as seed ortholog is 96%.

Group of orthologs #491. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.stipitis:294

F6Q5D4              	100.00%		A3LTA0              	100.00%
Bootstrap support for F6Q5D4 as seed ortholog is 100%.
Bootstrap support for A3LTA0 as seed ortholog is 100%.

Group of orthologs #492. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.stipitis:294

F6ZRT4              	100.00%		A3LRR6              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 100%.
Bootstrap support for A3LRR6 as seed ortholog is 100%.

Group of orthologs #493. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.stipitis:293

F6U9X5              	100.00%		A3GHF0              	100.00%
                    	       		A3GFN9              	81.60%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for A3GHF0 as seed ortholog is 100%.

Group of orthologs #494. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.stipitis:142

F6Z491              	100.00%		A3LP99              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for A3LP99 as seed ortholog is 100%.

Group of orthologs #495. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.stipitis:133

F7A0P0              	100.00%		A3LT96              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for A3LT96 as seed ortholog is 99%.

Group of orthologs #496. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:76

F7AQE7              	100.00%		A3M055              	100.00%
Bootstrap support for F7AQE7 as seed ortholog is 98%.
Bootstrap support for A3M055 as seed ortholog is 98%.

Group of orthologs #497. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.stipitis:292

F6PMY2              	100.00%		A3LR66              	100.00%
Bootstrap support for F6PMY2 as seed ortholog is 100%.
Bootstrap support for A3LR66 as seed ortholog is 100%.

Group of orthologs #498. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.stipitis:292

H2XWZ0              	100.00%		A3LMX2              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for A3LMX2 as seed ortholog is 100%.

Group of orthologs #499. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.stipitis:292

H2Y359              	100.00%		A3LPA3              	100.00%
Bootstrap support for H2Y359 as seed ortholog is 100%.
Bootstrap support for A3LPA3 as seed ortholog is 100%.

Group of orthologs #500. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.stipitis:291

F6VL61              	100.00%		A3LTZ7              	100.00%
F6VKS9              	21.61%		
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for A3LTZ7 as seed ortholog is 100%.

Group of orthologs #501. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.stipitis:291

F6RXZ8              	100.00%		A3LQU3              	100.00%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for A3LQU3 as seed ortholog is 100%.

Group of orthologs #502. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.stipitis:290

F6XUD5              	100.00%		A3LYW1              	100.00%
F6V9F0              	36.35%		
Bootstrap support for F6XUD5 as seed ortholog is 100%.
Bootstrap support for A3LYW1 as seed ortholog is 100%.

Group of orthologs #503. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.stipitis:290

F6TJB5              	100.00%		A3LT67              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for A3LT67 as seed ortholog is 100%.

Group of orthologs #504. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.stipitis:290

F6W141              	100.00%		A3LX87              	100.00%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for A3LX87 as seed ortholog is 100%.

Group of orthologs #505. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.stipitis:194

F6Z9I2              	100.00%		A3LRC4              	100.00%
Bootstrap support for F6Z9I2 as seed ortholog is 100%.
Bootstrap support for A3LRC4 as seed ortholog is 99%.

Group of orthologs #506. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.stipitis:212

H2XL44              	100.00%		A3LXG1              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for A3LXG1 as seed ortholog is 100%.

Group of orthologs #507. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.stipitis:289

F6Y1R8              	100.00%		A3LSB2              	100.00%
F6ZK74              	11.85%		
F7A0G1              	10.02%		
F6S6B2              	6.52%		
Bootstrap support for F6Y1R8 as seed ortholog is 100%.
Bootstrap support for A3LSB2 as seed ortholog is 100%.

Group of orthologs #508. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.stipitis:289

F6U4H3              	100.00%		A3LUY3              	100.00%
F7B684              	9.58%		
Bootstrap support for F6U4H3 as seed ortholog is 99%.
Bootstrap support for A3LUY3 as seed ortholog is 100%.

Group of orthologs #509. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.stipitis:71

F6QRJ2              	100.00%		A3LU37              	100.00%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for A3LU37 as seed ortholog is 98%.

Group of orthologs #510. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.stipitis:289

F6TMB1              	100.00%		A3LXW4              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for A3LXW4 as seed ortholog is 100%.

Group of orthologs #511. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.stipitis:289

F6YM02              	100.00%		A3LVJ1              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for A3LVJ1 as seed ortholog is 100%.

Group of orthologs #512. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.stipitis:289

H2XZQ0              	100.00%		A3LUI8              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for A3LUI8 as seed ortholog is 100%.

Group of orthologs #513. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.stipitis:288

F6YI87              	100.00%		A3LMT1              	100.00%
Bootstrap support for F6YI87 as seed ortholog is 100%.
Bootstrap support for A3LMT1 as seed ortholog is 100%.

Group of orthologs #514. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.stipitis:288

H2XTB0              	100.00%		A3LRZ0              	100.00%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for A3LRZ0 as seed ortholog is 100%.

Group of orthologs #515. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.stipitis:287

F7A5V7              	100.00%		A3LNI4              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 99%.
Bootstrap support for A3LNI4 as seed ortholog is 100%.

Group of orthologs #516. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.stipitis:286

F6SAH8              	100.00%		A3GF74              	100.00%
Bootstrap support for F6SAH8 as seed ortholog is 100%.
Bootstrap support for A3GF74 as seed ortholog is 100%.

Group of orthologs #517. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.stipitis:286

F6RC25              	100.00%		A3LVY9              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for A3LVY9 as seed ortholog is 100%.

Group of orthologs #518. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.stipitis:177

H2XK79              	100.00%		A3LZD4              	100.00%
H2XS68              	100.00%		A3LUG5              	78.41%
H2XVV3              	21.77%		
Bootstrap support for H2XK79 as seed ortholog is 100%.
Bootstrap support for H2XS68 as seed ortholog is 100%.
Bootstrap support for A3LZD4 as seed ortholog is 100%.

Group of orthologs #519. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.stipitis:204

F6SIX8              	100.00%		A3GI66              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for A3GI66 as seed ortholog is 100%.

Group of orthologs #520. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.stipitis:285

F6SUA6              	100.00%		A3LX74              	100.00%
Bootstrap support for F6SUA6 as seed ortholog is 76%.
Bootstrap support for A3LX74 as seed ortholog is 100%.

Group of orthologs #521. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.stipitis:285

F6SZY0              	100.00%		A3LXR8              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for A3LXR8 as seed ortholog is 100%.

Group of orthologs #522. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.stipitis:85

F6Z8I3              	100.00%		A3LWN8              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for A3LWN8 as seed ortholog is 96%.

Group of orthologs #523. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.stipitis:285

H2Y0A5              	100.00%		A3M095              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for A3M095 as seed ortholog is 100%.

Group of orthologs #524. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.stipitis:284

F7A7C3              	100.00%		A3GFN3              	100.00%
Bootstrap support for F7A7C3 as seed ortholog is 100%.
Bootstrap support for A3GFN3 as seed ortholog is 100%.

Group of orthologs #525. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.stipitis:284

F6YA95              	100.00%		A3LQN6              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for A3LQN6 as seed ortholog is 100%.

Group of orthologs #526. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.stipitis:235

F6VXM8              	100.00%		A3LY66              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 100%.
Bootstrap support for A3LY66 as seed ortholog is 100%.

Group of orthologs #527. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.stipitis:284

F6ZCS4              	100.00%		A3LR59              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #528. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.stipitis:283

F6UA87              	100.00%		A3LPT0              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for A3LPT0 as seed ortholog is 100%.

Group of orthologs #529. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.stipitis:282

F6UZS7              	100.00%		A3LYI9              	100.00%
                    	       		A3LU81              	36.98%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for A3LYI9 as seed ortholog is 100%.

Group of orthologs #530. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.stipitis:282

F6SSM8              	100.00%		A3GGS9              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for A3GGS9 as seed ortholog is 100%.

Group of orthologs #531. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.stipitis:282

F6Z672              	100.00%		A3LUB1              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for A3LUB1 as seed ortholog is 100%.

Group of orthologs #532. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:282

F7A8M5              	100.00%		A3LSX3              	100.00%
Bootstrap support for F7A8M5 as seed ortholog is 99%.
Bootstrap support for A3LSX3 as seed ortholog is 100%.

Group of orthologs #533. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.stipitis:281

F6SS61              	100.00%		A3LR94              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for A3LR94 as seed ortholog is 100%.

Group of orthologs #534. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.stipitis:281

F7A2K6              	100.00%		A3LX55              	100.00%
Bootstrap support for F7A2K6 as seed ortholog is 100%.
Bootstrap support for A3LX55 as seed ortholog is 100%.

Group of orthologs #535. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.stipitis:172

H2Y0H5              	100.00%		A3LYI5              	100.00%
F6V8V5              	39.10%		
Bootstrap support for H2Y0H5 as seed ortholog is 100%.
Bootstrap support for A3LYI5 as seed ortholog is 99%.

Group of orthologs #536. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.stipitis:280

F6U602              	100.00%		A3LVS9              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for A3LVS9 as seed ortholog is 100%.

Group of orthologs #537. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.stipitis:280

F7B2R9              	100.00%		A3LQV1              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for A3LQV1 as seed ortholog is 100%.

Group of orthologs #538. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:81

Q7YT82              	100.00%		A3GHC3              	100.00%
                    	       		A3LQX7              	100.00%
Bootstrap support for Q7YT82 as seed ortholog is 99%.
Bootstrap support for A3GHC3 as seed ortholog is 99%.
Bootstrap support for A3LQX7 as seed ortholog is 99%.

Group of orthologs #539. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.stipitis:279

F6QHP8              	100.00%		A3LU92              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for A3LU92 as seed ortholog is 100%.

Group of orthologs #540. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:279

F6VN41              	100.00%		A3LYW2              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 99%.
Bootstrap support for A3LYW2 as seed ortholog is 100%.

Group of orthologs #541. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.stipitis:197

F6ZKW1              	100.00%		A3LW11              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for A3LW11 as seed ortholog is 100%.

Group of orthologs #542. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.stipitis:279

H2XYT3              	100.00%		A3LS77              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for A3LS77 as seed ortholog is 100%.

Group of orthologs #543. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.stipitis:279

H2Y130              	100.00%		A3LRH9              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for A3LRH9 as seed ortholog is 100%.

Group of orthologs #544. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:233

F7AW67              	100.00%		A3LVU6              	100.00%
H2XZV4              	10.96%		
Bootstrap support for F7AW67 as seed ortholog is 99%.
Bootstrap support for A3LVU6 as seed ortholog is 100%.

Group of orthologs #545. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.stipitis:278

F6X3S3              	100.00%		A3LQV5              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for A3LQV5 as seed ortholog is 100%.

Group of orthologs #546. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:278

F6YKJ2              	100.00%		A3LPR3              	100.00%
Bootstrap support for F6YKJ2 as seed ortholog is 86%.
Bootstrap support for A3LPR3 as seed ortholog is 100%.

Group of orthologs #547. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:77

F7AZI8              	100.00%		A3LNM7              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 90%.
Bootstrap support for A3LNM7 as seed ortholog is 97%.

Group of orthologs #548. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:277

F6UK82              	100.00%		A3GGS1              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 91%.
Bootstrap support for A3GGS1 as seed ortholog is 100%.

Group of orthologs #549. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.stipitis:277

F6XPZ4              	100.00%		A3GFP3              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for A3GFP3 as seed ortholog is 100%.

Group of orthologs #550. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.stipitis:277

F6WBA4              	100.00%		A3LVW8              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for A3LVW8 as seed ortholog is 100%.

Group of orthologs #551. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.stipitis:277

H2XVQ9              	100.00%		A3LRQ6              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for A3LRQ6 as seed ortholog is 100%.

Group of orthologs #552. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.stipitis:275

F6ZFS8              	100.00%		A3GGL3              	100.00%
F6UR25              	20.44%		
Bootstrap support for F6ZFS8 as seed ortholog is 100%.
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #553. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.stipitis:221

F6Q8V8              	100.00%		A3LVE9              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for A3LVE9 as seed ortholog is 100%.

Group of orthologs #554. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.stipitis:168

F6Y7E9              	100.00%		A3GFU4              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for A3GFU4 as seed ortholog is 100%.

Group of orthologs #555. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:275

H2XKK7              	100.00%		A3LTE1              	100.00%
Bootstrap support for H2XKK7 as seed ortholog is 99%.
Bootstrap support for A3LTE1 as seed ortholog is 100%.

Group of orthologs #556. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.stipitis:275

H2Y3Q6              	100.00%		A3LT77              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for A3LT77 as seed ortholog is 100%.

Group of orthologs #557. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.stipitis:274

F6Q041              	100.00%		A3LXP8              	100.00%
Bootstrap support for F6Q041 as seed ortholog is 100%.
Bootstrap support for A3LXP8 as seed ortholog is 100%.

Group of orthologs #558. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.stipitis:274

F6VCT2              	100.00%		A3LT02              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for A3LT02 as seed ortholog is 100%.

Group of orthologs #559. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.stipitis:274

F6YSX7              	100.00%		A3GGP5              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for A3GGP5 as seed ortholog is 100%.

Group of orthologs #560. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.stipitis:273

F6TFD0              	100.00%		A3LXZ1              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for A3LXZ1 as seed ortholog is 100%.

Group of orthologs #561. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.stipitis:273

F6Z6H7              	100.00%		A3LYJ6              	100.00%
Bootstrap support for F6Z6H7 as seed ortholog is 100%.
Bootstrap support for A3LYJ6 as seed ortholog is 100%.

Group of orthologs #562. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.stipitis:273

F7BIS1              	100.00%		A3LZ98              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for A3LZ98 as seed ortholog is 100%.

Group of orthologs #563. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.stipitis:272

H2XY21              	100.00%		A3GH96              	100.00%
F6ZI02              	100.00%		A3GH98              	100.00%
F7ABR6              	22.96%		
Bootstrap support for H2XY21 as seed ortholog is 96%.
Bootstrap support for F6ZI02 as seed ortholog is 94%.
Bootstrap support for A3GH96 as seed ortholog is 100%.
Bootstrap support for A3GH98 as seed ortholog is 100%.

Group of orthologs #564. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.stipitis:17

Q7YT79              	100.00%		A3LQE1              	100.00%
F6PNQ0              	51.61%		
F6PNI9              	32.26%		
Q7YT74              	8.06%		
Bootstrap support for Q7YT79 as seed ortholog is 86%.
Bootstrap support for A3LQE1 as seed ortholog is 76%.

Group of orthologs #565. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:160

H2XVF8              	100.00%		A3LPL1              	100.00%
Bootstrap support for H2XVF8 as seed ortholog is 100%.
Bootstrap support for A3LPL1 as seed ortholog is 99%.

Group of orthologs #566. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.stipitis:271

F6VW40              	100.00%		A3GHJ6              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for A3GHJ6 as seed ortholog is 100%.

Group of orthologs #567. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:146

F6XCQ7              	100.00%		A3LXX3              	100.00%
Bootstrap support for F6XCQ7 as seed ortholog is 99%.
Bootstrap support for A3LXX3 as seed ortholog is 100%.

Group of orthologs #568. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:95

F7AUM2              	100.00%		A3M0I2              	100.00%
Bootstrap support for F7AUM2 as seed ortholog is 96%.
Bootstrap support for A3M0I2 as seed ortholog is 99%.

Group of orthologs #569. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.stipitis:270

F6UPC7              	100.00%		A3LTA4              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for A3LTA4 as seed ortholog is 100%.

Group of orthologs #570. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.stipitis:269

F6Q512              	100.00%		A3LUY5              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for A3LUY5 as seed ortholog is 100%.

Group of orthologs #571. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.stipitis:269

F6UP49              	100.00%		A3LYU6              	100.00%
Bootstrap support for F6UP49 as seed ortholog is 100%.
Bootstrap support for A3LYU6 as seed ortholog is 100%.

Group of orthologs #572. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:269

F6YCY6              	100.00%		A3LR67              	100.00%
Bootstrap support for F6YCY6 as seed ortholog is 98%.
Bootstrap support for A3LR67 as seed ortholog is 100%.

Group of orthologs #573. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.stipitis:269

H2XM91              	100.00%		A3LQH3              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for A3LQH3 as seed ortholog is 100%.

Group of orthologs #574. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:47

H2XZZ6              	100.00%		A3LXL6              	100.00%
Bootstrap support for H2XZZ6 as seed ortholog is 99%.
Bootstrap support for A3LXL6 as seed ortholog is 90%.

Group of orthologs #575. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.stipitis:267

F6TEZ1              	100.00%		A3LXY4              	100.00%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for A3LXY4 as seed ortholog is 100%.

Group of orthologs #576. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.stipitis:114

F6T0J5              	100.00%		A3M057              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for A3M057 as seed ortholog is 99%.

Group of orthologs #577. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.stipitis:267

F6XGG4              	100.00%		A3LV51              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 100%.
Bootstrap support for A3LV51 as seed ortholog is 100%.

Group of orthologs #578. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.stipitis:106

F6ZAX9              	100.00%		A3M0M1              	100.00%
H2XN25              	54.66%		
F7BEM7              	29.33%		
F6WKT2              	24.18%		
H2XYN4              	8.33%		
Bootstrap support for F6ZAX9 as seed ortholog is 100%.
Bootstrap support for A3M0M1 as seed ortholog is 97%.

Group of orthologs #579. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.stipitis:266

F6TX35              	100.00%		A3LVB4              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for A3LVB4 as seed ortholog is 100%.

Group of orthologs #580. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:182

F6YBW7              	100.00%		A3LTB4              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 97%.
Bootstrap support for A3LTB4 as seed ortholog is 99%.

Group of orthologs #581. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.stipitis:207

H2Y2L0              	100.00%		A3LRU7              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for A3LRU7 as seed ortholog is 100%.

Group of orthologs #582. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:265

H2XYZ3              	100.00%		A3LXS8              	100.00%
F6X923              	70.35%		A3LP77              	11.92%
F6SZT6              	11.43%		
F6V5Q8              	10.20%		
Bootstrap support for H2XYZ3 as seed ortholog is 96%.
Bootstrap support for A3LXS8 as seed ortholog is 100%.

Group of orthologs #583. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:265

F6SKI3              	100.00%		A3LUU6              	100.00%
Bootstrap support for F6SKI3 as seed ortholog is 89%.
Bootstrap support for A3LUU6 as seed ortholog is 100%.

Group of orthologs #584. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.stipitis:264

F6TJL2              	100.00%		A3LT27              	100.00%
F6TJJ0              	29.51%		
F6TFE5              	23.45%		
Bootstrap support for F6TJL2 as seed ortholog is 100%.
Bootstrap support for A3LT27 as seed ortholog is 100%.

Group of orthologs #585. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.stipitis:138

F6WRV9              	100.00%		A3LUA8              	100.00%
F6YHL8              	37.02%		
Bootstrap support for F6WRV9 as seed ortholog is 100%.
Bootstrap support for A3LUA8 as seed ortholog is 99%.

Group of orthologs #586. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.stipitis:264

K9J6P5              	100.00%		A3LU28              	100.00%
F7AYD9              	69.03%		
Bootstrap support for K9J6P5 as seed ortholog is 100%.
Bootstrap support for A3LU28 as seed ortholog is 100%.

Group of orthologs #587. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.stipitis:264

F6XWE7              	100.00%		A3LX94              	100.00%
Bootstrap support for F6XWE7 as seed ortholog is 51%.
Alternative seed ortholog is F6TJJ7 (4 bits away from this cluster)
Bootstrap support for A3LX94 as seed ortholog is 100%.

Group of orthologs #588. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.stipitis:264

H2Y0S6              	100.00%		A3LTD9              	100.00%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for A3LTD9 as seed ortholog is 100%.

Group of orthologs #589. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.stipitis:194

F6TYX5              	100.00%		A3LMS4              	100.00%
Bootstrap support for F6TYX5 as seed ortholog is 99%.
Bootstrap support for A3LMS4 as seed ortholog is 100%.

Group of orthologs #590. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.stipitis:263

F6XFJ7              	100.00%		A3GGH3              	100.00%
Bootstrap support for F6XFJ7 as seed ortholog is 100%.
Bootstrap support for A3GGH3 as seed ortholog is 100%.

Group of orthologs #591. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:38

F7AEF7              	100.00%		A3GG58              	100.00%
Bootstrap support for F7AEF7 as seed ortholog is 100%.
Bootstrap support for A3GG58 as seed ortholog is 82%.

Group of orthologs #592. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.stipitis:220

H2XVD5              	100.00%		A3GI79              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for A3GI79 as seed ortholog is 100%.

Group of orthologs #593. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.stipitis:263

H2XYL3              	100.00%		A3GG59              	100.00%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for A3GG59 as seed ortholog is 100%.

Group of orthologs #594. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.stipitis:262

H2XTN7              	100.00%		A3LQ53              	100.00%
F6W1V5              	10.64%		
Bootstrap support for H2XTN7 as seed ortholog is 100%.
Bootstrap support for A3LQ53 as seed ortholog is 100%.

Group of orthologs #595. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.stipitis:131

F6RUQ3              	100.00%		A3LP40              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for A3LP40 as seed ortholog is 99%.

Group of orthologs #596. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.stipitis:262

F6QLM7              	100.00%		A3LTL4              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for A3LTL4 as seed ortholog is 100%.

Group of orthologs #597. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.stipitis:260

H2XM50              	100.00%		A3LQP8              	100.00%
F6R614              	40.28%		
Bootstrap support for H2XM50 as seed ortholog is 100%.
Bootstrap support for A3LQP8 as seed ortholog is 100%.

Group of orthologs #598. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.stipitis:260

F6YH10              	100.00%		A3GF16              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for A3GF16 as seed ortholog is 100%.

Group of orthologs #599. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.stipitis:154

F6Y5B7              	100.00%		A3GGX4              	100.00%
Bootstrap support for F6Y5B7 as seed ortholog is 75%.
Bootstrap support for A3GGX4 as seed ortholog is 100%.

Group of orthologs #600. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.stipitis:189

F7AIP5              	100.00%		A3LQT9              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for A3LQT9 as seed ortholog is 100%.

Group of orthologs #601. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.stipitis:260

F7A606              	100.00%		A3LZA2              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for A3LZA2 as seed ortholog is 100%.

Group of orthologs #602. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.stipitis:259

F7AGW4              	100.00%		A3GFV4              	100.00%
Bootstrap support for F7AGW4 as seed ortholog is 100%.
Bootstrap support for A3GFV4 as seed ortholog is 100%.

Group of orthologs #603. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.stipitis:259

F6Z0U1              	100.00%		A3LYL4              	100.00%
Bootstrap support for F6Z0U1 as seed ortholog is 100%.
Bootstrap support for A3LYL4 as seed ortholog is 100%.

Group of orthologs #604. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:16

F6R4H2              	100.00%		A3LUH2              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 99%.
Bootstrap support for A3LUH2 as seed ortholog is 67%.
Alternative seed ortholog is A3GG57 (16 bits away from this cluster)

Group of orthologs #605. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.stipitis:258

F6VXD0              	100.00%		A3GGY9              	100.00%
Bootstrap support for F6VXD0 as seed ortholog is 100%.
Bootstrap support for A3GGY9 as seed ortholog is 100%.

Group of orthologs #606. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.stipitis:258

F6TFE2              	100.00%		A3LX09              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for A3LX09 as seed ortholog is 100%.

Group of orthologs #607. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.stipitis:258

F6WH82              	100.00%		A3LW21              	100.00%
Bootstrap support for F6WH82 as seed ortholog is 100%.
Bootstrap support for A3LW21 as seed ortholog is 100%.

Group of orthologs #608. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:140

F6XT42              	100.00%		A3LW51              	100.00%
Bootstrap support for F6XT42 as seed ortholog is 97%.
Bootstrap support for A3LW51 as seed ortholog is 99%.

Group of orthologs #609. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:257

F6VZQ1              	100.00%		A3GI48              	100.00%
                    	       		A3GF29              	30.45%
Bootstrap support for F6VZQ1 as seed ortholog is 97%.
Bootstrap support for A3GI48 as seed ortholog is 100%.

Group of orthologs #610. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:257

F6Q0S7              	100.00%		A3LN57              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for A3LN57 as seed ortholog is 100%.

Group of orthologs #611. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.stipitis:257

F6PJM3              	100.00%		A3LW69              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 96%.
Bootstrap support for A3LW69 as seed ortholog is 100%.

Group of orthologs #612. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:257

F6TXT5              	100.00%		A3LP59              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #613. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:257

F6VCH9              	100.00%		A3LS37              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for A3LS37 as seed ortholog is 100%.

Group of orthologs #614. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:56

F6X4N7              	100.00%		A3LNZ4              	100.00%
Bootstrap support for F6X4N7 as seed ortholog is 100%.
Bootstrap support for A3LNZ4 as seed ortholog is 93%.

Group of orthologs #615. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:257

F6U3Q1              	100.00%		A3LYA3              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for A3LYA3 as seed ortholog is 100%.

Group of orthologs #616. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:257

F6YHS8              	100.00%		A3LQN8              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for A3LQN8 as seed ortholog is 100%.

Group of orthologs #617. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:257

F7B5B2              	100.00%		A3LU31              	100.00%
Bootstrap support for F7B5B2 as seed ortholog is 100%.
Bootstrap support for A3LU31 as seed ortholog is 100%.

Group of orthologs #618. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:257

F6Z7W1              	100.00%		A3LZ99              	100.00%
Bootstrap support for F6Z7W1 as seed ortholog is 94%.
Bootstrap support for A3LZ99 as seed ortholog is 100%.

Group of orthologs #619. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.stipitis:257

H2XWU7              	100.00%		A3GEZ2              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for A3GEZ2 as seed ortholog is 100%.

Group of orthologs #620. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.stipitis:141

F6YLI3              	100.00%		A3M060              	100.00%
H2XKD1              	22.44%		
H2XUD0              	20.88%		
Bootstrap support for F6YLI3 as seed ortholog is 100%.
Bootstrap support for A3M060 as seed ortholog is 99%.

Group of orthologs #621. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.stipitis:255

F6Q4K7              	100.00%		A3LT20              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for A3LT20 as seed ortholog is 100%.

Group of orthologs #622. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.stipitis:255

F6QY24              	100.00%		A3LVB0              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for A3LVB0 as seed ortholog is 100%.

Group of orthologs #623. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:255

F6VUL9              	100.00%		A3LZL7              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for A3LZL7 as seed ortholog is 100%.

Group of orthologs #624. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.stipitis:255

F7AJZ2              	100.00%		A3LYE8              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for A3LYE8 as seed ortholog is 100%.

Group of orthologs #625. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.stipitis:254

Q68A28              	100.00%		A3LQ08              	100.00%
F6QQZ3              	13.16%		
Bootstrap support for Q68A28 as seed ortholog is 100%.
Bootstrap support for A3LQ08 as seed ortholog is 100%.

Group of orthologs #626. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:143

F6WWK0              	100.00%		A3GGZ4              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 99%.
Bootstrap support for A3GGZ4 as seed ortholog is 99%.

Group of orthologs #627. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.stipitis:254

F6SNL0              	100.00%		A3LVZ0              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for A3LVZ0 as seed ortholog is 100%.

Group of orthologs #628. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.stipitis:254

F6RID7              	100.00%		A3LZL0              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #629. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.stipitis:65

Q1RL34              	100.00%		A3LV83              	100.00%
H2XW94              	5.05%		
Bootstrap support for Q1RL34 as seed ortholog is 100%.
Bootstrap support for A3LV83 as seed ortholog is 97%.

Group of orthologs #630. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.stipitis:73

F6W2M8              	100.00%		A3LN94              	100.00%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for A3LN94 as seed ortholog is 98%.

Group of orthologs #631. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.stipitis:252

H2XKP7              	100.00%		A3GEZ3              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 100%.
Bootstrap support for A3GEZ3 as seed ortholog is 100%.

Group of orthologs #632. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.stipitis:252

H2XVM9              	100.00%		A3LU89              	100.00%
Bootstrap support for H2XVM9 as seed ortholog is 100%.
Bootstrap support for A3LU89 as seed ortholog is 100%.

Group of orthologs #633. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.stipitis:251

Q8T8A6              	100.00%		A3LP27              	100.00%
F6XVB0              	31.51%		
F6XG08              	24.43%		
Bootstrap support for Q8T8A6 as seed ortholog is 99%.
Bootstrap support for A3LP27 as seed ortholog is 100%.

Group of orthologs #634. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.stipitis:112

F6UEG1              	100.00%		A3GGG6              	100.00%
F6RSU8              	10.78%		
Bootstrap support for F6UEG1 as seed ortholog is 92%.
Bootstrap support for A3GGG6 as seed ortholog is 99%.

Group of orthologs #635. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.stipitis:250

H2XLN7              	100.00%		A3LSN7              	100.00%
                    	       		A3GIE7              	65.31%
                    	       		A3LRV4              	11.46%
Bootstrap support for H2XLN7 as seed ortholog is 100%.
Bootstrap support for A3LSN7 as seed ortholog is 100%.

Group of orthologs #636. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.stipitis:250

F6Q601              	100.00%		A3LNS4              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for A3LNS4 as seed ortholog is 100%.

Group of orthologs #637. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.stipitis:250

F6UJD6              	100.00%		A3GHZ3              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for A3GHZ3 as seed ortholog is 100%.

Group of orthologs #638. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.stipitis:250

F6STU7              	100.00%		A3LVC9              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for A3LVC9 as seed ortholog is 100%.

Group of orthologs #639. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.stipitis:250

F6WBE1              	100.00%		A3LSH4              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for A3LSH4 as seed ortholog is 100%.

Group of orthologs #640. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.stipitis:250

H2XQ81              	100.00%		A3LVK2              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for A3LVK2 as seed ortholog is 100%.

Group of orthologs #641. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.stipitis:94

H2XUE3              	100.00%		A3LS43              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for A3LS43 as seed ortholog is 99%.

Group of orthologs #642. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.stipitis:248

F7B4P8              	100.00%		A3LNS0              	100.00%
Bootstrap support for F7B4P8 as seed ortholog is 100%.
Bootstrap support for A3LNS0 as seed ortholog is 100%.

Group of orthologs #643. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.stipitis:248

F6XVD3              	100.00%		A3M0D6              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for A3M0D6 as seed ortholog is 100%.

Group of orthologs #644. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:106

H2XK16              	100.00%		A3LXD5              	100.00%
F7AHT0              	88.89%		A3GHN6              	56.25%
Bootstrap support for H2XK16 as seed ortholog is 100%.
Bootstrap support for A3LXD5 as seed ortholog is 100%.

Group of orthologs #645. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.stipitis:246

F6TJ64              	100.00%		A3GI99              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for A3GI99 as seed ortholog is 100%.

Group of orthologs #646. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.stipitis:246

F6Y3K6              	100.00%		A3GGR4              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for A3GGR4 as seed ortholog is 100%.

Group of orthologs #647. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.stipitis:246

F6UAZ6              	100.00%		A3LYR2              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for A3LYR2 as seed ortholog is 100%.

Group of orthologs #648. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.stipitis:181

H2XR08              	100.00%		A3LPM8              	100.00%
Bootstrap support for H2XR08 as seed ortholog is 100%.
Bootstrap support for A3LPM8 as seed ortholog is 99%.

Group of orthologs #649. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.stipitis:245

F6TJ76              	100.00%		A3LY94              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for A3LY94 as seed ortholog is 100%.

Group of orthologs #650. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.stipitis:120

F6ZRB6              	100.00%		A3LY31              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for A3LY31 as seed ortholog is 99%.

Group of orthologs #651. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.stipitis:245

H2XRW4              	100.00%		A3LRW9              	100.00%
Bootstrap support for H2XRW4 as seed ortholog is 100%.
Bootstrap support for A3LRW9 as seed ortholog is 100%.

Group of orthologs #652. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.stipitis:244

F6ZVR2              	100.00%		A3GH30              	100.00%
Bootstrap support for F6ZVR2 as seed ortholog is 99%.
Bootstrap support for A3GH30 as seed ortholog is 100%.

Group of orthologs #653. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.stipitis:244

F7B8G2              	100.00%		A3LSS6              	100.00%
Bootstrap support for F7B8G2 as seed ortholog is 100%.
Bootstrap support for A3LSS6 as seed ortholog is 100%.

Group of orthologs #654. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.stipitis:162

F7BNW5              	100.00%		A3LWC5              	100.00%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for A3LWC5 as seed ortholog is 99%.

Group of orthologs #655. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.stipitis:243

F6U1K7              	100.00%		A3GGT4              	100.00%
F6W673              	5.06%		
Bootstrap support for F6U1K7 as seed ortholog is 100%.
Bootstrap support for A3GGT4 as seed ortholog is 100%.

Group of orthologs #656. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.stipitis:243

F7B658              	100.00%		A3LP89              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for A3LP89 as seed ortholog is 100%.

Group of orthologs #657. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:243

H2XT24              	100.00%		A3LYF2              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 99%.
Bootstrap support for A3LYF2 as seed ortholog is 100%.

Group of orthologs #658. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.stipitis:41

F6W2S7              	100.00%		P22144              	100.00%
H2Y2K6              	12.76%		
Bootstrap support for F6W2S7 as seed ortholog is 99%.
Bootstrap support for P22144 as seed ortholog is 86%.

Group of orthologs #659. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.stipitis:242

F6UJM5              	100.00%		A3LTK4              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for A3LTK4 as seed ortholog is 100%.

Group of orthologs #660. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:80

F7A9Y8              	100.00%		A3GI29              	100.00%
Bootstrap support for F7A9Y8 as seed ortholog is 99%.
Bootstrap support for A3GI29 as seed ortholog is 98%.

Group of orthologs #661. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.stipitis:242

F7BKD9              	100.00%		A3GEY7              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #662. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.stipitis:241

F6S043              	100.00%		A3LWN5              	100.00%
                    	       		A3LNM1              	76.83%
                    	       		A3LXA2              	75.26%
                    	       		A3LUP5              	71.40%
                    	       		A3GIC0              	59.39%
Bootstrap support for F6S043 as seed ortholog is 100%.
Bootstrap support for A3LWN5 as seed ortholog is 100%.

Group of orthologs #663. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.stipitis:241

F6RNB7              	100.00%		A3LWM6              	100.00%
Bootstrap support for F6RNB7 as seed ortholog is 100%.
Bootstrap support for A3LWM6 as seed ortholog is 100%.

Group of orthologs #664. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.stipitis:26

F6Z9D3              	100.00%		A3LU79              	100.00%
F7B9D6              	10.84%		
F7ATZ1              	5.30%		
Bootstrap support for F6Z9D3 as seed ortholog is 97%.
Bootstrap support for A3LU79 as seed ortholog is 75%.

Group of orthologs #665. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.stipitis:153

F6UUV9              	100.00%		A3LS53              	100.00%
Bootstrap support for F6UUV9 as seed ortholog is 100%.
Bootstrap support for A3LS53 as seed ortholog is 99%.

Group of orthologs #666. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.stipitis:240

F6YLQ9              	100.00%		A3M0H9              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for A3M0H9 as seed ortholog is 100%.

Group of orthologs #667. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.stipitis:137

F6VKA0              	100.00%		A3LZ87              	100.00%
Bootstrap support for F6VKA0 as seed ortholog is 99%.
Bootstrap support for A3LZ87 as seed ortholog is 99%.

Group of orthologs #668. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.stipitis:238

F7A5R9              	100.00%		A3LWW1              	100.00%
Bootstrap support for F7A5R9 as seed ortholog is 100%.
Bootstrap support for A3LWW1 as seed ortholog is 100%.

Group of orthologs #669. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.stipitis:237

H2XU57              	100.00%		A3LUZ2              	100.00%
Q8I7D6              	96.88%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for A3LUZ2 as seed ortholog is 100%.

Group of orthologs #670. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.stipitis:237

F6R589              	100.00%		A3GG94              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for A3GG94 as seed ortholog is 100%.

Group of orthologs #671. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.stipitis:237

F6RGI4              	100.00%		A3GHB0              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for A3GHB0 as seed ortholog is 100%.

Group of orthologs #672. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.stipitis:237

F6R4F4              	100.00%		A3LS11              	100.00%
Bootstrap support for F6R4F4 as seed ortholog is 99%.
Bootstrap support for A3LS11 as seed ortholog is 100%.

Group of orthologs #673. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:96

F6R3W0              	100.00%		A3LXT6              	100.00%
Bootstrap support for F6R3W0 as seed ortholog is 99%.
Bootstrap support for A3LXT6 as seed ortholog is 99%.

Group of orthologs #674. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.stipitis:237

F6YYA5              	100.00%		A3LWA7              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for A3LWA7 as seed ortholog is 100%.

Group of orthologs #675. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.stipitis:237

F7BKI5              	100.00%		A3LWM7              	100.00%
Bootstrap support for F7BKI5 as seed ortholog is 100%.
Bootstrap support for A3LWM7 as seed ortholog is 100%.

Group of orthologs #676. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.stipitis:237

H2XY10              	100.00%		A3M087              	100.00%
Bootstrap support for H2XY10 as seed ortholog is 100%.
Bootstrap support for A3M087 as seed ortholog is 100%.

Group of orthologs #677. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:147

F6SJF0              	100.00%		A3LZG1              	100.00%
Bootstrap support for F6SJF0 as seed ortholog is 99%.
Bootstrap support for A3LZG1 as seed ortholog is 99%.

Group of orthologs #678. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:97

F6QXH6              	100.00%		A3LPG3              	100.00%
F6UAF0              	22.64%		
H2XNB4              	17.92%		
F6RCT7              	17.92%		
Bootstrap support for F6QXH6 as seed ortholog is 100%.
Bootstrap support for A3LPG3 as seed ortholog is 99%.

Group of orthologs #679. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.stipitis:235

F6TXN5              	100.00%		A3LMX0              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for A3LMX0 as seed ortholog is 100%.

Group of orthologs #680. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:128

F6RGE7              	100.00%		A3LTA2              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 100%.
Bootstrap support for A3LTA2 as seed ortholog is 100%.

Group of orthologs #681. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.stipitis:73

F6VTZ3              	100.00%		A3GF11              	100.00%
Bootstrap support for F6VTZ3 as seed ortholog is 100%.
Bootstrap support for A3GF11 as seed ortholog is 93%.

Group of orthologs #682. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.stipitis:235

F6WNN3              	100.00%		P49434              	100.00%
Bootstrap support for F6WNN3 as seed ortholog is 100%.
Bootstrap support for P49434 as seed ortholog is 100%.

Group of orthologs #683. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.stipitis:116

H2XLI2              	100.00%		A3LNI7              	100.00%
Bootstrap support for H2XLI2 as seed ortholog is 99%.
Bootstrap support for A3LNI7 as seed ortholog is 99%.

Group of orthologs #684. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.stipitis:234

F6QQ08              	100.00%		A3LT92              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for A3LT92 as seed ortholog is 100%.

Group of orthologs #685. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.stipitis:234

F6SUP0              	100.00%		A3LR95              	100.00%
Bootstrap support for F6SUP0 as seed ortholog is 67%.
Alternative seed ortholog is H2XNZ6 (27 bits away from this cluster)
Bootstrap support for A3LR95 as seed ortholog is 100%.

Group of orthologs #686. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:124

F6XT60              	100.00%		A3LTR3              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 99%.
Bootstrap support for A3LTR3 as seed ortholog is 99%.

Group of orthologs #687. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.stipitis:234

F6X9L5              	100.00%		A3LVC4              	100.00%
Bootstrap support for F6X9L5 as seed ortholog is 100%.
Bootstrap support for A3LVC4 as seed ortholog is 100%.

Group of orthologs #688. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:110

H2XR98              	100.00%		A3LZN6              	100.00%
Bootstrap support for H2XR98 as seed ortholog is 93%.
Bootstrap support for A3LZN6 as seed ortholog is 99%.

Group of orthologs #689. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.stipitis:233

F6SBF1              	100.00%		A3GF09              	100.00%
Bootstrap support for F6SBF1 as seed ortholog is 100%.
Bootstrap support for A3GF09 as seed ortholog is 100%.

Group of orthologs #690. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 S.stipitis:70

F6Y7P7              	100.00%		A3LU51              	100.00%
Bootstrap support for F6Y7P7 as seed ortholog is 67%.
Alternative seed ortholog is F7ATI9 (25 bits away from this cluster)
Bootstrap support for A3LU51 as seed ortholog is 94%.

Group of orthologs #691. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.stipitis:233

F6YCP6              	100.00%		A3LWH5              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for A3LWH5 as seed ortholog is 100%.

Group of orthologs #692. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.stipitis:232

F6PSK8              	100.00%		A3GET1              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 100%.
Bootstrap support for A3GET1 as seed ortholog is 100%.

Group of orthologs #693. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.stipitis:232

F6T9R1              	100.00%		A3LQJ1              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #694. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:232

F6SM85              	100.00%		A3LVL3              	100.00%
Bootstrap support for F6SM85 as seed ortholog is 98%.
Bootstrap support for A3LVL3 as seed ortholog is 100%.

Group of orthologs #695. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.stipitis:232

Q8I7E3              	100.00%		A3LXR4              	100.00%
Bootstrap support for Q8I7E3 as seed ortholog is 100%.
Bootstrap support for A3LXR4 as seed ortholog is 100%.

Group of orthologs #696. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.stipitis:231

F6TTI3              	100.00%		A3GFE2              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 99%.
Bootstrap support for A3GFE2 as seed ortholog is 100%.

Group of orthologs #697. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.stipitis:231

F6XVH4              	100.00%		A3GG41              	100.00%
Bootstrap support for F6XVH4 as seed ortholog is 100%.
Bootstrap support for A3GG41 as seed ortholog is 100%.

Group of orthologs #698. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.stipitis:230

F6Q1G7              	100.00%		A3M0D7              	100.00%
Bootstrap support for F6Q1G7 as seed ortholog is 95%.
Bootstrap support for A3M0D7 as seed ortholog is 100%.

Group of orthologs #699. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.stipitis:230

F7A5L4              	100.00%		A3GFS1              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for A3GFS1 as seed ortholog is 100%.

Group of orthologs #700. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.stipitis:118

F6YI64              	100.00%		A3LPI7              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for A3LPI7 as seed ortholog is 100%.

Group of orthologs #701. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.stipitis:112

F6Z255              	100.00%		A3LV89              	100.00%
Bootstrap support for F6Z255 as seed ortholog is 94%.
Bootstrap support for A3LV89 as seed ortholog is 99%.

Group of orthologs #702. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.stipitis:230

F7BQ53              	100.00%		A3LU49              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for A3LU49 as seed ortholog is 100%.

Group of orthologs #703. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.stipitis:230

H2XZ65              	100.00%		A3LWX2              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for A3LWX2 as seed ortholog is 100%.

Group of orthologs #704. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.stipitis:229

F6Y1N2              	100.00%		A3GGW7              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for A3GGW7 as seed ortholog is 100%.

Group of orthologs #705. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:229

Q8I7E2              	100.00%		A3GGN4              	100.00%
Bootstrap support for Q8I7E2 as seed ortholog is 99%.
Bootstrap support for A3GGN4 as seed ortholog is 100%.

Group of orthologs #706. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.stipitis:228

F6PM63              	100.00%		A3GF08              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for A3GF08 as seed ortholog is 100%.

Group of orthologs #707. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.stipitis:228

F6QE16              	100.00%		A3LMY4              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for A3LMY4 as seed ortholog is 100%.

Group of orthologs #708. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.stipitis:228

F6SSU2              	100.00%		A3GF78              	100.00%
Bootstrap support for F6SSU2 as seed ortholog is 100%.
Bootstrap support for A3GF78 as seed ortholog is 100%.

Group of orthologs #709. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.stipitis:228

F6SYV7              	100.00%		A3GFI8              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for A3GFI8 as seed ortholog is 100%.

Group of orthologs #710. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.stipitis:228

F6QS75              	100.00%		A3LV87              	100.00%
Bootstrap support for F6QS75 as seed ortholog is 100%.
Bootstrap support for A3LV87 as seed ortholog is 100%.

Group of orthologs #711. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.stipitis:228

F6ZN43              	100.00%		A3LPS9              	100.00%
Bootstrap support for F6ZN43 as seed ortholog is 100%.
Bootstrap support for A3LPS9 as seed ortholog is 100%.

Group of orthologs #712. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.stipitis:75

F7AB24              	100.00%		A3LR45              	100.00%
Bootstrap support for F7AB24 as seed ortholog is 100%.
Bootstrap support for A3LR45 as seed ortholog is 96%.

Group of orthologs #713. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.stipitis:227

F6QXQ1              	100.00%		A3LW07              	100.00%
F6PPW9              	44.38%		
Bootstrap support for F6QXQ1 as seed ortholog is 99%.
Bootstrap support for A3LW07 as seed ortholog is 100%.

Group of orthologs #714. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.stipitis:227

F6QAP0              	100.00%		A3LXN5              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for A3LXN5 as seed ortholog is 100%.

Group of orthologs #715. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.stipitis:227

F6XVH7              	100.00%		A3LPU9              	100.00%
Bootstrap support for F6XVH7 as seed ortholog is 100%.
Bootstrap support for A3LPU9 as seed ortholog is 100%.

Group of orthologs #716. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.stipitis:227

F6ZZH3              	100.00%		A3LQB9              	100.00%
Bootstrap support for F6ZZH3 as seed ortholog is 100%.
Bootstrap support for A3LQB9 as seed ortholog is 100%.

Group of orthologs #717. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.stipitis:226

H2XSL3              	100.00%		A3GGK7              	100.00%
                    	       		A3GGK8              	5.85%
Bootstrap support for H2XSL3 as seed ortholog is 100%.
Bootstrap support for A3GGK7 as seed ortholog is 100%.

Group of orthologs #718. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:89

F6X159              	100.00%		A3LPZ8              	100.00%
F6XXW0              	16.56%		
F7BJ92              	6.63%		
Bootstrap support for F6X159 as seed ortholog is 99%.
Bootstrap support for A3LPZ8 as seed ortholog is 99%.

Group of orthologs #719. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.stipitis:225

F6WYT3              	100.00%		A3M0J9              	100.00%
H2XRA0              	20.32%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for A3M0J9 as seed ortholog is 100%.

Group of orthologs #720. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.stipitis:225

F6S6A5              	100.00%		A3LVG8              	100.00%
Bootstrap support for F6S6A5 as seed ortholog is 100%.
Bootstrap support for A3LVG8 as seed ortholog is 100%.

Group of orthologs #721. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.stipitis:225

F6WJQ0              	100.00%		A3LR93              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for A3LR93 as seed ortholog is 100%.

Group of orthologs #722. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.stipitis:225

F6YG81              	100.00%		A3LRQ8              	100.00%
Bootstrap support for F6YG81 as seed ortholog is 100%.
Bootstrap support for A3LRQ8 as seed ortholog is 100%.

Group of orthologs #723. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.stipitis:225

F6XXF0              	100.00%		A3LUW1              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for A3LUW1 as seed ortholog is 100%.

Group of orthologs #724. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.stipitis:68

H2XLJ3              	100.00%		A3GGL4              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 85%.
Bootstrap support for A3GGL4 as seed ortholog is 99%.

Group of orthologs #725. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:135

H2XRU5              	100.00%		A3LY45              	100.00%
Bootstrap support for H2XRU5 as seed ortholog is 99%.
Bootstrap support for A3LY45 as seed ortholog is 100%.

Group of orthologs #726. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.stipitis:225

H2XRS3              	100.00%		A3LZS2              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for A3LZS2 as seed ortholog is 100%.

Group of orthologs #727. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.stipitis:224

F6V6F4              	100.00%		A3LQE7              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for A3LQE7 as seed ortholog is 100%.

Group of orthologs #728. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.stipitis:224

F6XBT4              	100.00%		A3GHI8              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for A3GHI8 as seed ortholog is 100%.

Group of orthologs #729. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.stipitis:47

F6WZS8              	100.00%		A3LNJ4              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for A3LNJ4 as seed ortholog is 88%.

Group of orthologs #730. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.stipitis:224

F6V8N9              	100.00%		A3LTI0              	100.00%
Bootstrap support for F6V8N9 as seed ortholog is 100%.
Bootstrap support for A3LTI0 as seed ortholog is 100%.

Group of orthologs #731. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.stipitis:224

F6W318              	100.00%		A3LTA7              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for A3LTA7 as seed ortholog is 100%.

Group of orthologs #732. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.stipitis:224

F7A955              	100.00%		A3LNY2              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for A3LNY2 as seed ortholog is 100%.

Group of orthologs #733. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:58

H2XQ03              	100.00%		A3LND0              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 91%.
Bootstrap support for A3LND0 as seed ortholog is 86%.

Group of orthologs #734. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:16

H2XQH0              	100.00%		P31867              	100.00%
F6ZRC6              	36.11%		
H2XUY3              	17.13%		
Bootstrap support for H2XQH0 as seed ortholog is 98%.
Bootstrap support for P31867 as seed ortholog is 67%.
Alternative seed ortholog is A3LZK0 (16 bits away from this cluster)

Group of orthologs #735. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.stipitis:223

F6QS20              	100.00%		A3LW27              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for A3LW27 as seed ortholog is 100%.

Group of orthologs #736. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.stipitis:223

F6W713              	100.00%		A3GH69              	100.00%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for A3GH69 as seed ortholog is 100%.

Group of orthologs #737. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.stipitis:223

F6WQB5              	100.00%		A3GHP9              	100.00%
Bootstrap support for F6WQB5 as seed ortholog is 100%.
Bootstrap support for A3GHP9 as seed ortholog is 100%.

Group of orthologs #738. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:137

F6S2W5              	100.00%		A3LZD6              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 99%.
Bootstrap support for A3LZD6 as seed ortholog is 100%.

Group of orthologs #739. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.stipitis:223

F7AEV2              	100.00%		A3GFR5              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for A3GFR5 as seed ortholog is 100%.

Group of orthologs #740. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:127

F6XWG9              	100.00%		A3LS38              	100.00%
Bootstrap support for F6XWG9 as seed ortholog is 99%.
Bootstrap support for A3LS38 as seed ortholog is 100%.

Group of orthologs #741. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.stipitis:222

F7AXL0              	100.00%		A3GHT1              	100.00%
F6PQW3              	5.01%		A3LZQ9              	11.86%
Bootstrap support for F7AXL0 as seed ortholog is 100%.
Bootstrap support for A3GHT1 as seed ortholog is 100%.

Group of orthologs #742. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.stipitis:160

F6WYW5              	100.00%		A3LSL2              	100.00%
F6QWS2              	16.73%		
Bootstrap support for F6WYW5 as seed ortholog is 99%.
Bootstrap support for A3LSL2 as seed ortholog is 99%.

Group of orthologs #743. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.stipitis:222

F6QX56              	100.00%		A3LWP2              	100.00%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for A3LWP2 as seed ortholog is 100%.

Group of orthologs #744. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.stipitis:222

F6UP98              	100.00%		A3LPI6              	100.00%
Bootstrap support for F6UP98 as seed ortholog is 100%.
Bootstrap support for A3LPI6 as seed ortholog is 100%.

Group of orthologs #745. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:84

F6PH64              	100.00%		A3LSJ2              	100.00%
Bootstrap support for F6PH64 as seed ortholog is 97%.
Bootstrap support for A3LSJ2 as seed ortholog is 97%.

Group of orthologs #746. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:48

F6TFY3              	100.00%		A3LQ11              	100.00%
Bootstrap support for F6TFY3 as seed ortholog is 99%.
Bootstrap support for A3LQ11 as seed ortholog is 97%.

Group of orthologs #747. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.stipitis:118

F6UMT8              	100.00%		A3LSH7              	100.00%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for A3LSH7 as seed ortholog is 99%.

Group of orthologs #748. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.stipitis:221

F6YRR0              	100.00%		A3GFB5              	100.00%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for A3GFB5 as seed ortholog is 100%.

Group of orthologs #749. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.stipitis:221

F6Z3V6              	100.00%		A3LTX4              	100.00%
Bootstrap support for F6Z3V6 as seed ortholog is 100%.
Bootstrap support for A3LTX4 as seed ortholog is 100%.

Group of orthologs #750. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:109

F6T2A6              	100.00%		A3GH66              	100.00%
F6T2C1              	87.01%		
Bootstrap support for F6T2A6 as seed ortholog is 99%.
Bootstrap support for A3GH66 as seed ortholog is 100%.

Group of orthologs #751. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.stipitis:220

F6TC27              	100.00%		A3GHU9              	100.00%
F6Q0G0              	9.70%		
Bootstrap support for F6TC27 as seed ortholog is 100%.
Bootstrap support for A3GHU9 as seed ortholog is 100%.

Group of orthologs #752. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.stipitis:220

F7B1Y1              	100.00%		A3LQK6              	100.00%
Q8I7D5              	90.41%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for A3LQK6 as seed ortholog is 100%.

Group of orthologs #753. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.stipitis:220

F6SNM2              	100.00%		A3LZS3              	100.00%
Bootstrap support for F6SNM2 as seed ortholog is 100%.
Bootstrap support for A3LZS3 as seed ortholog is 100%.

Group of orthologs #754. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.stipitis:65

F7B670              	100.00%		A3LQ02              	100.00%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for A3LQ02 as seed ortholog is 93%.

Group of orthologs #755. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.stipitis:220

F6YGZ1              	100.00%		A3M063              	100.00%
Bootstrap support for F6YGZ1 as seed ortholog is 100%.
Bootstrap support for A3M063 as seed ortholog is 100%.

Group of orthologs #756. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.stipitis:219

F6S360              	100.00%		A3LXK5              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for A3LXK5 as seed ortholog is 100%.

Group of orthologs #757. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:219

F6ZS66              	100.00%		A3LR62              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 98%.
Bootstrap support for A3LR62 as seed ortholog is 100%.

Group of orthologs #758. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.stipitis:219

H2XY27              	100.00%		A3LUJ2              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #759. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:130

H2Y3H5              	100.00%		A3LR20              	100.00%
Bootstrap support for H2Y3H5 as seed ortholog is 99%.
Bootstrap support for A3LR20 as seed ortholog is 100%.

Group of orthologs #760. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.stipitis:218

F6PQL4              	100.00%		A3LW77              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for A3LW77 as seed ortholog is 100%.

Group of orthologs #761. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:77

F6SZ54              	100.00%		A3LV62              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 99%.
Bootstrap support for A3LV62 as seed ortholog is 98%.

Group of orthologs #762. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.stipitis:218

F6UJI9              	100.00%		A3LUZ0              	100.00%
Bootstrap support for F6UJI9 as seed ortholog is 100%.
Bootstrap support for A3LUZ0 as seed ortholog is 100%.

Group of orthologs #763. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:217

H2XUL1              	100.00%		A3LP86              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 93%.
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #764. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:217

H2XR17              	100.00%		A3LW98              	100.00%
Bootstrap support for H2XR17 as seed ortholog is 98%.
Bootstrap support for A3LW98 as seed ortholog is 100%.

Group of orthologs #765. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.stipitis:216

F6SHZ7              	100.00%		A3GGE4              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for A3GGE4 as seed ortholog is 100%.

Group of orthologs #766. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.stipitis:216

F6UX10              	100.00%		A3LNB9              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for A3LNB9 as seed ortholog is 100%.

Group of orthologs #767. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:123

F6VEB2              	100.00%		A3LVM1              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 99%.
Bootstrap support for A3LVM1 as seed ortholog is 99%.

Group of orthologs #768. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.stipitis:216

F7B391              	100.00%		A3LR09              	100.00%
Bootstrap support for F7B391 as seed ortholog is 100%.
Bootstrap support for A3LR09 as seed ortholog is 100%.

Group of orthologs #769. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.stipitis:216

F7BH80              	100.00%		A3LZJ1              	100.00%
Bootstrap support for F7BH80 as seed ortholog is 100%.
Bootstrap support for A3LZJ1 as seed ortholog is 100%.

Group of orthologs #770. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.stipitis:215

F6WJQ9              	100.00%		A3GGL1              	100.00%
Bootstrap support for F6WJQ9 as seed ortholog is 100%.
Bootstrap support for A3GGL1 as seed ortholog is 100%.

Group of orthologs #771. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.stipitis:215

F6WUH0              	100.00%		A3M007              	100.00%
Bootstrap support for F6WUH0 as seed ortholog is 100%.
Bootstrap support for A3M007 as seed ortholog is 100%.

Group of orthologs #772. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.stipitis:215

H2XPN9              	100.00%		A3GHJ3              	100.00%
Bootstrap support for H2XPN9 as seed ortholog is 100%.
Bootstrap support for A3GHJ3 as seed ortholog is 100%.

Group of orthologs #773. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.stipitis:214

F6TCH6              	100.00%		A3GFV6              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for A3GFV6 as seed ortholog is 100%.

Group of orthologs #774. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.stipitis:214

I6L7H7              	100.00%		A3LTN2              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for A3LTN2 as seed ortholog is 100%.

Group of orthologs #775. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.stipitis:213

F7BBQ5              	100.00%		A3LVN3              	100.00%
F6YB01              	29.27%		
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #776. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:119

F6SP32              	100.00%		A3LR03              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 99%.
Bootstrap support for A3LR03 as seed ortholog is 99%.

Group of orthologs #777. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.stipitis:213

F6PKT6              	100.00%		A3LZK8              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for A3LZK8 as seed ortholog is 100%.

Group of orthologs #778. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.stipitis:213

F6X1E1              	100.00%		A3LZT5              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for A3LZT5 as seed ortholog is 100%.

Group of orthologs #779. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.stipitis:212

F6TL19              	100.00%		A3LPJ5              	100.00%
Bootstrap support for F6TL19 as seed ortholog is 100%.
Bootstrap support for A3LPJ5 as seed ortholog is 100%.

Group of orthologs #780. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.stipitis:212

F6TLE4              	100.00%		A3LT93              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for A3LT93 as seed ortholog is 100%.

Group of orthologs #781. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:115

F6UQ99              	100.00%		A3LTX0              	100.00%
Bootstrap support for F6UQ99 as seed ortholog is 99%.
Bootstrap support for A3LTX0 as seed ortholog is 99%.

Group of orthologs #782. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.stipitis:212

F6UGM6              	100.00%		A3LZT9              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for A3LZT9 as seed ortholog is 100%.

Group of orthologs #783. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.stipitis:211

F6UNA3              	100.00%		A3LRK1              	100.00%
F6QH95              	34.41%		A3GG49              	16.43%
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for A3LRK1 as seed ortholog is 100%.

Group of orthologs #784. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.stipitis:211

F6QSK8              	100.00%		A3LTE6              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for A3LTE6 as seed ortholog is 100%.

Group of orthologs #785. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.stipitis:211

H2XRD9              	100.00%		A3LY82              	100.00%
Bootstrap support for H2XRD9 as seed ortholog is 100%.
Bootstrap support for A3LY82 as seed ortholog is 100%.

Group of orthologs #786. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.stipitis:210

F6RAN6              	100.00%		A3LNK3              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for A3LNK3 as seed ortholog is 100%.

Group of orthologs #787. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.stipitis:210

F6UA65              	100.00%		A3GHJ9              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for A3GHJ9 as seed ortholog is 100%.

Group of orthologs #788. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.stipitis:130

H2Y3T6              	100.00%		A3LU85              	100.00%
Bootstrap support for H2Y3T6 as seed ortholog is 83%.
Bootstrap support for A3LU85 as seed ortholog is 100%.

Group of orthologs #789. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.stipitis:209

F6S4U2              	100.00%		A3GH80              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for A3GH80 as seed ortholog is 100%.

Group of orthologs #790. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.stipitis:209

F6TRN8              	100.00%		A3GFV1              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for A3GFV1 as seed ortholog is 100%.

Group of orthologs #791. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.stipitis:209

F6SF69              	100.00%		A3LSM2              	100.00%
Bootstrap support for F6SF69 as seed ortholog is 100%.
Bootstrap support for A3LSM2 as seed ortholog is 100%.

Group of orthologs #792. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.stipitis:14

F6WHS8              	100.00%		A3LMX8              	100.00%
Bootstrap support for F6WHS8 as seed ortholog is 100%.
Bootstrap support for A3LMX8 as seed ortholog is 55%.
Alternative seed ortholog is A3LVM3 (14 bits away from this cluster)

Group of orthologs #793. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.stipitis:124

F7B3M4              	100.00%		A3GHV8              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for A3GHV8 as seed ortholog is 100%.

Group of orthologs #794. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.stipitis:37

Q967X2              	100.00%		A3LVM4              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for A3LVM4 as seed ortholog is 89%.

Group of orthologs #795. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.stipitis:208

F6TZ34              	100.00%		A3LQ82              	100.00%
F7AAS8              	19.24%		
Bootstrap support for F6TZ34 as seed ortholog is 65%.
Alternative seed ortholog is F6PR16 (13 bits away from this cluster)
Bootstrap support for A3LQ82 as seed ortholog is 100%.

Group of orthologs #796. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:208

F6W170              	100.00%		A3LXC4              	100.00%
Bootstrap support for F6W170 as seed ortholog is 99%.
Bootstrap support for A3LXC4 as seed ortholog is 100%.

Group of orthologs #797. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.stipitis:208

F6YIJ5              	100.00%		A3LRZ3              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for A3LRZ3 as seed ortholog is 100%.

Group of orthologs #798. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.stipitis:208

F6Y6W3              	100.00%		A3LTN3              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for A3LTN3 as seed ortholog is 100%.

Group of orthologs #799. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:85

F7AFK8              	100.00%		A3LNJ1              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 99%.
Bootstrap support for A3LNJ1 as seed ortholog is 99%.

Group of orthologs #800. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.stipitis:208

H2XW76              	100.00%		A3LQ48              	100.00%
Bootstrap support for H2XW76 as seed ortholog is 99%.
Bootstrap support for A3LQ48 as seed ortholog is 100%.

Group of orthologs #801. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.stipitis:207

F6SZE1              	100.00%		A3LNA7              	100.00%
Bootstrap support for F6SZE1 as seed ortholog is 70%.
Alternative seed ortholog is F7AL38 (33 bits away from this cluster)
Bootstrap support for A3LNA7 as seed ortholog is 100%.

Group of orthologs #802. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.stipitis:207

F6TAD8              	100.00%		A3LVV0              	100.00%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for A3LVV0 as seed ortholog is 100%.

Group of orthologs #803. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.stipitis:207

F6UUA2              	100.00%		A3M0K6              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #804. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.stipitis:207

F6Z910              	100.00%		A3LS21              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for A3LS21 as seed ortholog is 100%.

Group of orthologs #805. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.stipitis:206

F6ZIP8              	100.00%		A3GG79              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for A3GG79 as seed ortholog is 100%.

Group of orthologs #806. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.stipitis:206

F6YHC8              	100.00%		A3LTT7              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for A3LTT7 as seed ortholog is 100%.

Group of orthologs #807. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:133

F6XEX3              	100.00%		A3LT70              	100.00%
F6XEW4              	33.62%		A3LWM3              	14.46%
                    	       		A3GGC6              	9.16%
                    	       		A3LY54              	7.84%
Bootstrap support for F6XEX3 as seed ortholog is 100%.
Bootstrap support for A3LT70 as seed ortholog is 99%.

Group of orthologs #808. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:205

F6YGN3              	100.00%		A3GHX2              	100.00%
F7A8J9              	17.28%		
Bootstrap support for F6YGN3 as seed ortholog is 100%.
Bootstrap support for A3GHX2 as seed ortholog is 100%.

Group of orthologs #809. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:205

H2XZ54              	100.00%		A3GF98              	100.00%
F6Y5Q3              	16.67%		
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for A3GF98 as seed ortholog is 100%.

Group of orthologs #810. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:205

F6SZ37              	100.00%		A3LXC2              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for A3LXC2 as seed ortholog is 100%.

Group of orthologs #811. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:205

F7B1W3              	100.00%		A3LSC6              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for A3LSC6 as seed ortholog is 100%.

Group of orthologs #812. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:205

F7B376              	100.00%		A3LTF7              	100.00%
Bootstrap support for F7B376 as seed ortholog is 100%.
Bootstrap support for A3LTF7 as seed ortholog is 100%.

Group of orthologs #813. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.stipitis:205

H2XPW5              	100.00%		A3LZ48              	100.00%
Bootstrap support for H2XPW5 as seed ortholog is 100%.
Bootstrap support for A3LZ48 as seed ortholog is 100%.

Group of orthologs #814. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.stipitis:1

Q4H383              	100.00%		A3LT45              	100.00%
Bootstrap support for Q4H383 as seed ortholog is 97%.
Bootstrap support for A3LT45 as seed ortholog is 49%.
Alternative seed ortholog is A3M0B5 (1 bits away from this cluster)

Group of orthologs #815. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.stipitis:204

F7ACM5              	100.00%		A3LYP5              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for A3LYP5 as seed ortholog is 100%.

Group of orthologs #816. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:203

F6V771              	100.00%		A3LST9              	100.00%
                    	       		A3LZ17              	38.43%
                    	       		A3LZ45              	24.57%
Bootstrap support for F6V771 as seed ortholog is 100%.
Bootstrap support for A3LST9 as seed ortholog is 100%.

Group of orthologs #817. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:203

F6RCC2              	100.00%		A3LYI7              	100.00%
I6L237              	96.85%		
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for A3LYI7 as seed ortholog is 100%.

Group of orthologs #818. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:203

F6RBT7              	100.00%		A3GFA9              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for A3GFA9 as seed ortholog is 100%.

Group of orthologs #819. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:203

F6VKZ4              	100.00%		A3LW04              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for A3LW04 as seed ortholog is 100%.

Group of orthologs #820. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:203

F7AP04              	100.00%		A3LND3              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for A3LND3 as seed ortholog is 100%.

Group of orthologs #821. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.stipitis:159

F7B2Q1              	100.00%		A3LX44              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for A3LX44 as seed ortholog is 100%.

Group of orthologs #822. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.stipitis:30

F6RXW9              	100.00%		A3GHK3              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for A3GHK3 as seed ortholog is 95%.

Group of orthologs #823. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:135

F6T7Y6              	100.00%		A3LNI6              	100.00%
Bootstrap support for F6T7Y6 as seed ortholog is 99%.
Bootstrap support for A3LNI6 as seed ortholog is 100%.

Group of orthologs #824. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.stipitis:201

F6VJT7              	100.00%		A3LNX2              	100.00%
F7BLJ0              	34.42%		A3LNX1              	74.74%
F6SF16              	18.46%		A3LV79              	11.01%
                    	       		A3LQQ9              	10.80%
Bootstrap support for F6VJT7 as seed ortholog is 100%.
Bootstrap support for A3LNX2 as seed ortholog is 100%.

Group of orthologs #825. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.stipitis:201

F6YGG6              	100.00%		A3GH22              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for A3GH22 as seed ortholog is 100%.

Group of orthologs #826. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:49

F6WNH9              	100.00%		A3LTH0              	100.00%
Bootstrap support for F6WNH9 as seed ortholog is 99%.
Bootstrap support for A3LTH0 as seed ortholog is 95%.

Group of orthologs #827. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.stipitis:201

F6X5U2              	100.00%		A3LVR6              	100.00%
Bootstrap support for F6X5U2 as seed ortholog is 100%.
Bootstrap support for A3LVR6 as seed ortholog is 100%.

Group of orthologs #828. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.stipitis:201

F6XWN6              	100.00%		A3LUJ0              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for A3LUJ0 as seed ortholog is 100%.

Group of orthologs #829. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.stipitis:201

F7A2R6              	100.00%		A3LT49              	100.00%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for A3LT49 as seed ortholog is 100%.

Group of orthologs #830. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:136

H2XMB6              	100.00%		A3LZ35              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 99%.
Bootstrap support for A3LZ35 as seed ortholog is 100%.

Group of orthologs #831. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.stipitis:200

H2XQS5              	100.00%		A3LR26              	100.00%
F7ADF2              	54.30%		A3LY33              	100.00%
Bootstrap support for H2XQS5 as seed ortholog is 100%.
Bootstrap support for A3LR26 as seed ortholog is 100%.
Bootstrap support for A3LY33 as seed ortholog is 100%.

Group of orthologs #832. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.stipitis:200

F6SHN0              	100.00%		A3LVC2              	100.00%
F6TSK2              	62.34%		
Bootstrap support for F6SHN0 as seed ortholog is 100%.
Bootstrap support for A3LVC2 as seed ortholog is 100%.

Group of orthologs #833. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.stipitis:200

H2XUS4              	100.00%		A3LQC4              	100.00%
                    	       		A3LYC5              	9.28%
Bootstrap support for H2XUS4 as seed ortholog is 100%.
Bootstrap support for A3LQC4 as seed ortholog is 100%.

Group of orthologs #834. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.stipitis:109

F6QEH2              	100.00%		A3GFX4              	100.00%
Bootstrap support for F6QEH2 as seed ortholog is 99%.
Bootstrap support for A3GFX4 as seed ortholog is 99%.

Group of orthologs #835. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.stipitis:200

F6R7I5              	100.00%		A3LMT5              	100.00%
Bootstrap support for F6R7I5 as seed ortholog is 100%.
Bootstrap support for A3LMT5 as seed ortholog is 100%.

Group of orthologs #836. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.stipitis:50

F6X3X4              	100.00%		A3LXQ4              	100.00%
Bootstrap support for F6X3X4 as seed ortholog is 59%.
Alternative seed ortholog is H2XS14 (8 bits away from this cluster)
Bootstrap support for A3LXQ4 as seed ortholog is 92%.

Group of orthologs #837. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:200

H2XZ35              	100.00%		A3LZ51              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 99%.
Bootstrap support for A3LZ51 as seed ortholog is 100%.

Group of orthologs #838. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.stipitis:199

F7B5X2              	100.00%		A3LVI7              	100.00%
                    	       		A3LUN5              	55.74%
                    	       		A3LYK4              	55.61%
                    	       		A3GFD1              	46.88%
                    	       		A3LQQ3              	46.74%
                    	       		A3GFE6              	46.34%
                    	       		A3GH01              	5.91%
Bootstrap support for F7B5X2 as seed ortholog is 100%.
Bootstrap support for A3LVI7 as seed ortholog is 100%.

Group of orthologs #839. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:53

F6Y403              	100.00%		A3GFU2              	100.00%
H2XPY5              	19.83%		A3LU84              	42.15%
                    	       		A3LY85              	38.06%
Bootstrap support for F6Y403 as seed ortholog is 96%.
Bootstrap support for A3GFU2 as seed ortholog is 85%.

Group of orthologs #840. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:70

F6VL41              	100.00%		A3LXZ2              	100.00%
F6YBW0              	25.90%		
Bootstrap support for F6VL41 as seed ortholog is 93%.
Bootstrap support for A3LXZ2 as seed ortholog is 37%.
Alternative seed ortholog is A3LSH0 (70 bits away from this cluster)

Group of orthologs #841. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.stipitis:199

H2XSU1              	100.00%		A3GGN3              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for A3GGN3 as seed ortholog is 100%.

Group of orthologs #842. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.stipitis:199

H2XS37              	100.00%		A3LQX1              	100.00%
Bootstrap support for H2XS37 as seed ortholog is 100%.
Bootstrap support for A3LQX1 as seed ortholog is 100%.

Group of orthologs #843. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.stipitis:199

H2XXH1              	100.00%		A3LX39              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for A3LX39 as seed ortholog is 100%.

Group of orthologs #844. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.stipitis:198

F6TB52              	100.00%		A3LU90              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for A3LU90 as seed ortholog is 100%.

Group of orthologs #845. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.stipitis:198

F6YSM6              	100.00%		A3GGA2              	100.00%
Bootstrap support for F6YSM6 as seed ortholog is 100%.
Bootstrap support for A3GGA2 as seed ortholog is 100%.

Group of orthologs #846. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.stipitis:198

F6UUL4              	100.00%		A3LYU5              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for A3LYU5 as seed ortholog is 100%.

Group of orthologs #847. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:86

F7A771              	100.00%		A3LPX0              	100.00%
Bootstrap support for F7A771 as seed ortholog is 99%.
Bootstrap support for A3LPX0 as seed ortholog is 99%.

Group of orthologs #848. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.stipitis:198

F7BF26              	100.00%		A3LNR7              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for A3LNR7 as seed ortholog is 100%.

Group of orthologs #849. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.stipitis:146

F7B5Q2              	100.00%		A3LXM0              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for A3LXM0 as seed ortholog is 99%.

Group of orthologs #850. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.stipitis:198

H2XQ34              	100.00%		A3M0G9              	100.00%
Bootstrap support for H2XQ34 as seed ortholog is 100%.
Bootstrap support for A3M0G9 as seed ortholog is 100%.

Group of orthologs #851. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.stipitis:197

F6QWW6              	100.00%		A3LP13              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for A3LP13 as seed ortholog is 100%.

Group of orthologs #852. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:2

F6S1S7              	100.00%		A3LZ12              	100.00%
Bootstrap support for F6S1S7 as seed ortholog is 98%.
Bootstrap support for A3LZ12 as seed ortholog is 64%.
Alternative seed ortholog is A3GGS8 (2 bits away from this cluster)

Group of orthologs #853. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.stipitis:197

H2XP26              	100.00%		A3LPI0              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for A3LPI0 as seed ortholog is 100%.

Group of orthologs #854. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.stipitis:197

F6ZN66              	100.00%		A3LZW4              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for A3LZW4 as seed ortholog is 100%.

Group of orthologs #855. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.stipitis:196

F6V6S8              	100.00%		A3GFH2              	100.00%
                    	       		A3M0N6              	40.22%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for A3GFH2 as seed ortholog is 100%.

Group of orthologs #856. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.stipitis:196

F6R2V7              	100.00%		A3GEZ9              	100.00%
Bootstrap support for F6R2V7 as seed ortholog is 100%.
Bootstrap support for A3GEZ9 as seed ortholog is 100%.

Group of orthologs #857. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.stipitis:196

F6SSS9              	100.00%		A3GGJ6              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for A3GGJ6 as seed ortholog is 100%.

Group of orthologs #858. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.stipitis:196

F6TBF9              	100.00%		A3LNA4              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for A3LNA4 as seed ortholog is 100%.

Group of orthologs #859. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:21

F6ZGS5              	100.00%		A3GF86              	100.00%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for A3GF86 as seed ortholog is 72%.
Alternative seed ortholog is A3LT66 (21 bits away from this cluster)

Group of orthologs #860. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.stipitis:196

F6Y6X7              	100.00%		A3LQV9              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for A3LQV9 as seed ortholog is 100%.

Group of orthologs #861. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.stipitis:196

F6XER0              	100.00%		A3LWQ7              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for A3LWQ7 as seed ortholog is 100%.

Group of orthologs #862. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:86

F6Z241              	100.00%		A3M0K7              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 99%.
Bootstrap support for A3M0K7 as seed ortholog is 99%.

Group of orthologs #863. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:1

H2XLX4              	100.00%		A3LSI3              	100.00%
Bootstrap support for H2XLX4 as seed ortholog is 99%.
Bootstrap support for A3LSI3 as seed ortholog is 55%.
Alternative seed ortholog is A3LMV1 (1 bits away from this cluster)

Group of orthologs #864. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.stipitis:195

F6QRC2              	100.00%		A3GHR9              	100.00%
F7ASL8              	20.38%		
F6PM82              	15.64%		
Bootstrap support for F6QRC2 as seed ortholog is 94%.
Bootstrap support for A3GHR9 as seed ortholog is 100%.

Group of orthologs #865. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:155

F6RGX1              	100.00%		A3LPX6              	100.00%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for A3LPX6 as seed ortholog is 100%.

Group of orthologs #866. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.stipitis:195

F6Y0M4              	100.00%		A3GHB2              	100.00%
Bootstrap support for F6Y0M4 as seed ortholog is 100%.
Bootstrap support for A3GHB2 as seed ortholog is 100%.

Group of orthologs #867. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:195

F6ZGT0              	100.00%		A3GGU1              	100.00%
Bootstrap support for F6ZGT0 as seed ortholog is 99%.
Bootstrap support for A3GGU1 as seed ortholog is 100%.

Group of orthologs #868. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.stipitis:195

F6YDG1              	100.00%		A3LQ64              	100.00%
Bootstrap support for F6YDG1 as seed ortholog is 100%.
Bootstrap support for A3LQ64 as seed ortholog is 100%.

Group of orthologs #869. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:72

H2XPL6              	100.00%		A3LP75              	100.00%
Bootstrap support for H2XPL6 as seed ortholog is 99%.
Bootstrap support for A3LP75 as seed ortholog is 97%.

Group of orthologs #870. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.stipitis:194

F6V9A1              	100.00%		A3LR50              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for A3LR50 as seed ortholog is 100%.

Group of orthologs #871. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.stipitis:194

F6Z3S0              	100.00%		A3GFH1              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for A3GFH1 as seed ortholog is 100%.

Group of orthologs #872. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.stipitis:31

F6ZP71              	100.00%		A3LTV4              	100.00%
Bootstrap support for F6ZP71 as seed ortholog is 99%.
Bootstrap support for A3LTV4 as seed ortholog is 75%.

Group of orthologs #873. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.stipitis:193

F6S8B5              	100.00%		A3LN26              	100.00%
F7B2Q7              	100.00%		
Bootstrap support for F6S8B5 as seed ortholog is 100%.
Bootstrap support for F7B2Q7 as seed ortholog is 100%.
Bootstrap support for A3LN26 as seed ortholog is 100%.

Group of orthologs #874. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.stipitis:193

F6V2M0              	100.00%		A3LS92              	100.00%
F7AN60              	6.27%		
Bootstrap support for F6V2M0 as seed ortholog is 100%.
Bootstrap support for A3LS92 as seed ortholog is 100%.

Group of orthologs #875. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:46

F6XB39              	100.00%		A3GHL8              	100.00%
Bootstrap support for F6XB39 as seed ortholog is 99%.
Bootstrap support for A3GHL8 as seed ortholog is 92%.

Group of orthologs #876. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.stipitis:193

F6X4T0              	100.00%		A3LP14              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for A3LP14 as seed ortholog is 100%.

Group of orthologs #877. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.stipitis:193

F7AHM4              	100.00%		A3LRU3              	100.00%
Bootstrap support for F7AHM4 as seed ortholog is 100%.
Bootstrap support for A3LRU3 as seed ortholog is 100%.

Group of orthologs #878. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.stipitis:39

F7BDH1              	100.00%		A3LQ90              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for A3LQ90 as seed ortholog is 80%.

Group of orthologs #879. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.stipitis:192

F6XL93              	100.00%		A3LS89              	100.00%
F6TCT1              	22.76%		
Bootstrap support for F6XL93 as seed ortholog is 100%.
Bootstrap support for A3LS89 as seed ortholog is 100%.

Group of orthologs #880. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.stipitis:192

F6Q021              	100.00%		A3GHP2              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for A3GHP2 as seed ortholog is 100%.

Group of orthologs #881. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.stipitis:104

F6PIZ2              	100.00%		A3LV75              	100.00%
Bootstrap support for F6PIZ2 as seed ortholog is 98%.
Bootstrap support for A3LV75 as seed ortholog is 99%.

Group of orthologs #882. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.stipitis:192

F6X4A0              	100.00%		A3LPW9              	100.00%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for A3LPW9 as seed ortholog is 100%.

Group of orthologs #883. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.stipitis:192

H2XLW7              	100.00%		A3GG44              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for A3GG44 as seed ortholog is 100%.

Group of orthologs #884. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.stipitis:192

H2XYW2              	100.00%		A3LQ03              	100.00%
Bootstrap support for H2XYW2 as seed ortholog is 100%.
Bootstrap support for A3LQ03 as seed ortholog is 100%.

Group of orthologs #885. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.stipitis:191

F6VMS4              	100.00%		A3GI37              	100.00%
                    	       		A3LMV3              	22.22%
                    	       		A3LYD2              	17.22%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for A3GI37 as seed ortholog is 100%.

Group of orthologs #886. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.stipitis:191

F6PM75              	100.00%		A3GG37              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for A3GG37 as seed ortholog is 100%.

Group of orthologs #887. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.stipitis:191

F6QBE1              	100.00%		A3LS87              	100.00%
Bootstrap support for F6QBE1 as seed ortholog is 100%.
Bootstrap support for A3LS87 as seed ortholog is 100%.

Group of orthologs #888. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.stipitis:191

F6WY47              	100.00%		A3LP31              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 99%.
Bootstrap support for A3LP31 as seed ortholog is 100%.

Group of orthologs #889. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:190

F6SGU7              	100.00%		A3LX48              	100.00%
H2Y279              	11.13%		
Bootstrap support for F6SGU7 as seed ortholog is 100%.
Bootstrap support for A3LX48 as seed ortholog is 100%.

Group of orthologs #890. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:190

F6W2L5              	100.00%		A3LPN3              	100.00%
                    	       		A3LSP4              	87.31%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for A3LPN3 as seed ortholog is 100%.

Group of orthologs #891. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:82

F6RYV9              	100.00%		A3LU99              	100.00%
Bootstrap support for F6RYV9 as seed ortholog is 99%.
Bootstrap support for A3LU99 as seed ortholog is 97%.

Group of orthologs #892. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:190

F6Z0E0              	100.00%		A3LQC7              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for A3LQC7 as seed ortholog is 100%.

Group of orthologs #893. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:190

F7BBJ6              	100.00%		A3GGB8              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for A3GGB8 as seed ortholog is 100%.

Group of orthologs #894. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:190

F7AEP2              	100.00%		A3LUN1              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for A3LUN1 as seed ortholog is 100%.

Group of orthologs #895. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.stipitis:190

H2XVM3              	100.00%		A3LQY0              	100.00%
Bootstrap support for H2XVM3 as seed ortholog is 100%.
Bootstrap support for A3LQY0 as seed ortholog is 100%.

Group of orthologs #896. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:189

F6PR96              	100.00%		A3M0P2              	100.00%
Bootstrap support for F6PR96 as seed ortholog is 99%.
Bootstrap support for A3M0P2 as seed ortholog is 100%.

Group of orthologs #897. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.stipitis:189

F6VIA9              	100.00%		A3LSA0              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for A3LSA0 as seed ortholog is 100%.

Group of orthologs #898. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.stipitis:189

F6UUI1              	100.00%		A3M047              	100.00%
Bootstrap support for F6UUI1 as seed ortholog is 100%.
Bootstrap support for A3M047 as seed ortholog is 100%.

Group of orthologs #899. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.stipitis:189

F7AH61              	100.00%		A3LQ24              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #900. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.stipitis:70

F6YFP0              	100.00%		A3LY99              	100.00%
Bootstrap support for F6YFP0 as seed ortholog is 100%.
Bootstrap support for A3LY99 as seed ortholog is 98%.

Group of orthologs #901. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.stipitis:188

F6RQZ5              	100.00%		A3LS25              	100.00%
                    	       		A3LY52              	23.77%
                    	       		A3LW31              	11.22%
                    	       		A3LQ72              	8.92%
                    	       		A3GH56              	8.10%
Bootstrap support for F6RQZ5 as seed ortholog is 100%.
Bootstrap support for A3LS25 as seed ortholog is 100%.

Group of orthologs #902. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:88

L7N0U6              	100.00%		A3LR75              	100.00%
F6PS78              	99.25%		A3LSY6              	59.36%
Bootstrap support for L7N0U6 as seed ortholog is 99%.
Bootstrap support for A3LR75 as seed ortholog is 99%.

Group of orthologs #903. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.stipitis:188

F6WM99              	100.00%		A3GFG7              	100.00%
Bootstrap support for F6WM99 as seed ortholog is 100%.
Bootstrap support for A3GFG7 as seed ortholog is 100%.

Group of orthologs #904. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:188

H2XZG7              	100.00%		A3LQL8              	100.00%
Bootstrap support for H2XZG7 as seed ortholog is 99%.
Bootstrap support for A3LQL8 as seed ortholog is 100%.

Group of orthologs #905. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 S.stipitis:187

F6VKM8              	100.00%		A3LQF2              	100.00%
Bootstrap support for F6VKM8 as seed ortholog is 49%.
Alternative seed ortholog is F6ZIM0 (6 bits away from this cluster)
Bootstrap support for A3LQF2 as seed ortholog is 100%.

Group of orthologs #906. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:186

F6S0N6              	100.00%		A3LY98              	100.00%
Bootstrap support for F6S0N6 as seed ortholog is 100%.
Bootstrap support for A3LY98 as seed ortholog is 100%.

Group of orthologs #907. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:186

F6REI3              	100.00%		A3LZV2              	100.00%
Bootstrap support for F6REI3 as seed ortholog is 100%.
Bootstrap support for A3LZV2 as seed ortholog is 100%.

Group of orthologs #908. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:186

F6VD75              	100.00%		A3LUU3              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for A3LUU3 as seed ortholog is 100%.

Group of orthologs #909. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:186

F6Y089              	100.00%		A3LVK6              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #910. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.stipitis:186

Q1RL58              	100.00%		A3LP53              	100.00%
Bootstrap support for Q1RL58 as seed ortholog is 100%.
Bootstrap support for A3LP53 as seed ortholog is 100%.

Group of orthologs #911. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:186

Q1RL25              	100.00%		A3LW63              	100.00%
Bootstrap support for Q1RL25 as seed ortholog is 82%.
Bootstrap support for A3LW63 as seed ortholog is 100%.

Group of orthologs #912. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.stipitis:185

F6QY42              	100.00%		A3LXT1              	100.00%
Bootstrap support for F6QY42 as seed ortholog is 100%.
Bootstrap support for A3LXT1 as seed ortholog is 100%.

Group of orthologs #913. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.stipitis:185

F6WSV3              	100.00%		A3LNX5              	100.00%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for A3LNX5 as seed ortholog is 100%.

Group of orthologs #914. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.stipitis:185

F6UIW1              	100.00%		A3LVM9              	100.00%
Bootstrap support for F6UIW1 as seed ortholog is 100%.
Bootstrap support for A3LVM9 as seed ortholog is 100%.

Group of orthologs #915. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.stipitis:71

F7AFR6              	100.00%		A3LVB6              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 95%.
Bootstrap support for A3LVB6 as seed ortholog is 94%.

Group of orthologs #916. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.stipitis:185

F7B5A5              	100.00%		A3M0L5              	100.00%
Bootstrap support for F7B5A5 as seed ortholog is 100%.
Bootstrap support for A3M0L5 as seed ortholog is 100%.

Group of orthologs #917. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.stipitis:185

H2Y1D7              	100.00%		A3LR70              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for A3LR70 as seed ortholog is 100%.

Group of orthologs #918. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.stipitis:184

F6SEU1              	100.00%		A3LQL9              	100.00%
Bootstrap support for F6SEU1 as seed ortholog is 100%.
Bootstrap support for A3LQL9 as seed ortholog is 100%.

Group of orthologs #919. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:120

F6XG01              	100.00%		A3LR33              	100.00%
Bootstrap support for F6XG01 as seed ortholog is 99%.
Bootstrap support for A3LR33 as seed ortholog is 99%.

Group of orthologs #920. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.stipitis:184

F7A9D9              	100.00%		A3GFW2              	100.00%
Bootstrap support for F7A9D9 as seed ortholog is 100%.
Bootstrap support for A3GFW2 as seed ortholog is 100%.

Group of orthologs #921. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.stipitis:184

H2XJG6              	100.00%		A3GI06              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for A3GI06 as seed ortholog is 100%.

Group of orthologs #922. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.stipitis:184

H2Y0X5              	100.00%		A3GGU8              	100.00%
Bootstrap support for H2Y0X5 as seed ortholog is 100%.
Bootstrap support for A3GGU8 as seed ortholog is 100%.

Group of orthologs #923. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:183

F6R683              	100.00%		A3LYC2              	100.00%
Bootstrap support for F6R683 as seed ortholog is 99%.
Bootstrap support for A3LYC2 as seed ortholog is 100%.

Group of orthologs #924. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.stipitis:183

F6XTQ1              	100.00%		A3GGH5              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for A3GGH5 as seed ortholog is 100%.

Group of orthologs #925. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:106

F6S569              	100.00%		A3LZT1              	100.00%
Bootstrap support for F6S569 as seed ortholog is 99%.
Bootstrap support for A3LZT1 as seed ortholog is 99%.

Group of orthologs #926. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.stipitis:183

F6UHS2              	100.00%		A3LXB0              	100.00%
Bootstrap support for F6UHS2 as seed ortholog is 75%.
Bootstrap support for A3LXB0 as seed ortholog is 100%.

Group of orthologs #927. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F6Q5L2              	100.00%		A3GI00              	100.00%
Bootstrap support for F6Q5L2 as seed ortholog is 100%.
Bootstrap support for A3GI00 as seed ortholog is 100%.

Group of orthologs #928. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F6V6R4              	100.00%		A3LRW1              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for A3LRW1 as seed ortholog is 100%.

Group of orthologs #929. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F6YB21              	100.00%		A3LQA4              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for A3LQA4 as seed ortholog is 100%.

Group of orthologs #930. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F6VF91              	100.00%		A3LZD3              	100.00%
Bootstrap support for F6VF91 as seed ortholog is 100%.
Bootstrap support for A3LZD3 as seed ortholog is 100%.

Group of orthologs #931. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F7AUL7              	100.00%		A3LP18              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for A3LP18 as seed ortholog is 100%.

Group of orthologs #932. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F7B499              	100.00%		A3LUF8              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for A3LUF8 as seed ortholog is 100%.

Group of orthologs #933. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

F7A4X2              	100.00%		A3M0L9              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #934. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.stipitis:182

H2XSX6              	100.00%		A3LYA6              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for A3LYA6 as seed ortholog is 100%.

Group of orthologs #935. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:57

F6TVX8              	100.00%		A3LQV8              	100.00%
                    	       		A3LNB8              	20.28%
Bootstrap support for F6TVX8 as seed ortholog is 95%.
Bootstrap support for A3LQV8 as seed ortholog is 91%.

Group of orthologs #936. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:123

F6YRX9              	100.00%		A3LXZ3              	100.00%
F6TK16              	8.94%		
Bootstrap support for F6YRX9 as seed ortholog is 99%.
Bootstrap support for A3LXZ3 as seed ortholog is 99%.

Group of orthologs #937. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:181

F6PHI9              	100.00%		A3GGA8              	100.00%
Bootstrap support for F6PHI9 as seed ortholog is 100%.
Bootstrap support for A3GGA8 as seed ortholog is 100%.

Group of orthologs #938. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:181

F6PP61              	100.00%		A3LVA8              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for A3LVA8 as seed ortholog is 100%.

Group of orthologs #939. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:181

F6QI05              	100.00%		A3LXE7              	100.00%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for A3LXE7 as seed ortholog is 100%.

Group of orthologs #940. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:181

F6W0Q4              	100.00%		A3LU96              	100.00%
Bootstrap support for F6W0Q4 as seed ortholog is 100%.
Bootstrap support for A3LU96 as seed ortholog is 100%.

Group of orthologs #941. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:181

F6U7X2              	100.00%		A3LZY0              	100.00%
Bootstrap support for F6U7X2 as seed ortholog is 76%.
Bootstrap support for A3LZY0 as seed ortholog is 100%.

Group of orthologs #942. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.stipitis:181

F6YGL5              	100.00%		A3LZB8              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 100%.
Bootstrap support for A3LZB8 as seed ortholog is 100%.

Group of orthologs #943. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:97

F7ASM2              	100.00%		A3LUR1              	100.00%
Bootstrap support for F7ASM2 as seed ortholog is 97%.
Bootstrap support for A3LUR1 as seed ortholog is 97%.

Group of orthologs #944. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:180

F6PPC0              	100.00%		A3LPZ2              	100.00%
Bootstrap support for F6PPC0 as seed ortholog is 100%.
Bootstrap support for A3LPZ2 as seed ortholog is 100%.

Group of orthologs #945. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:132

F6QDG1              	100.00%		A3LWT0              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 99%.
Bootstrap support for A3LWT0 as seed ortholog is 99%.

Group of orthologs #946. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:113

F6YG27              	100.00%		A3GFE3              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for A3GFE3 as seed ortholog is 99%.

Group of orthologs #947. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:104

F6S0S0              	100.00%		A3LZ09              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for A3LZ09 as seed ortholog is 98%.

Group of orthologs #948. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:180

F6YBU7              	100.00%		A3LW99              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for A3LW99 as seed ortholog is 100%.

Group of orthologs #949. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:180

F6Z781              	100.00%		A3LYN5              	100.00%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for A3LYN5 as seed ortholog is 100%.

Group of orthologs #950. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.stipitis:180

H2XTF1              	100.00%		A3LQ81              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for A3LQ81 as seed ortholog is 100%.

Group of orthologs #951. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:71

H2XY03              	100.00%		A3LPQ2              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 95%.
Bootstrap support for A3LPQ2 as seed ortholog is 97%.

Group of orthologs #952. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.stipitis:179

F6QZY3              	100.00%		A3GGM7              	100.00%
Bootstrap support for F6QZY3 as seed ortholog is 100%.
Bootstrap support for A3GGM7 as seed ortholog is 100%.

Group of orthologs #953. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.stipitis:179

F6TRZ2              	100.00%		A3LX38              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for A3LX38 as seed ortholog is 100%.

Group of orthologs #954. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.stipitis:94

H2Y3L9              	100.00%		A3GHK4              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for A3GHK4 as seed ortholog is 100%.

Group of orthologs #955. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:178

F6ZDT1              	100.00%		A3GHY4              	100.00%
Bootstrap support for F6ZDT1 as seed ortholog is 99%.
Bootstrap support for A3GHY4 as seed ortholog is 100%.

Group of orthologs #956. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.stipitis:178

F6WXJ5              	100.00%		A3LW23              	100.00%
Bootstrap support for F6WXJ5 as seed ortholog is 81%.
Bootstrap support for A3LW23 as seed ortholog is 100%.

Group of orthologs #957. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.stipitis:178

H2XTB6              	100.00%		A3LUY6              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for A3LUY6 as seed ortholog is 100%.

Group of orthologs #958. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.stipitis:177

F6RTW0              	100.00%		A3GF79              	100.00%
H2XPX9              	20.93%		
Bootstrap support for F6RTW0 as seed ortholog is 100%.
Bootstrap support for A3GF79 as seed ortholog is 100%.

Group of orthologs #959. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.stipitis:177

F6TCF8              	100.00%		A3LX25              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for A3LX25 as seed ortholog is 100%.

Group of orthologs #960. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.stipitis:177

F6WYI9              	100.00%		A3LU40              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for A3LU40 as seed ortholog is 100%.

Group of orthologs #961. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.stipitis:177

F6WQE3              	100.00%		A3LWH2              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for A3LWH2 as seed ortholog is 100%.

Group of orthologs #962. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:177

F6W3K8              	100.00%		A3LXU5              	100.00%
Bootstrap support for F6W3K8 as seed ortholog is 94%.
Bootstrap support for A3LXU5 as seed ortholog is 100%.

Group of orthologs #963. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.stipitis:177

H2XX92              	100.00%		A3GGU9              	100.00%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for A3GGU9 as seed ortholog is 100%.

Group of orthologs #964. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.stipitis:177

Q1RPZ2              	100.00%		A3GHS1              	100.00%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for A3GHS1 as seed ortholog is 100%.

Group of orthologs #965. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.stipitis:176

F6T2X1              	100.00%		A3LVW9              	100.00%
Bootstrap support for F6T2X1 as seed ortholog is 100%.
Bootstrap support for A3LVW9 as seed ortholog is 100%.

Group of orthologs #966. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.stipitis:176

F6U019              	100.00%		A3LVQ8              	100.00%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for A3LVQ8 as seed ortholog is 100%.

Group of orthologs #967. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.stipitis:176

I6L212              	100.00%		A3LNX3              	100.00%
Bootstrap support for I6L212 as seed ortholog is 100%.
Bootstrap support for A3LNX3 as seed ortholog is 100%.

Group of orthologs #968. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:175

F6Q7P2              	100.00%		A3LPM6              	100.00%
                    	       		A3LSX4              	13.51%
Bootstrap support for F6Q7P2 as seed ortholog is 99%.
Bootstrap support for A3LPM6 as seed ortholog is 100%.

Group of orthologs #969. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.stipitis:175

F6SNU1              	100.00%		A3LRQ7              	100.00%
                    	       		A3LVV1              	95.30%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for A3LRQ7 as seed ortholog is 100%.

Group of orthologs #970. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.stipitis:175

F6VH72              	100.00%		A3LT39              	100.00%
Bootstrap support for F6VH72 as seed ortholog is 100%.
Bootstrap support for A3LT39 as seed ortholog is 100%.

Group of orthologs #971. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.stipitis:175

F6X5M5              	100.00%		A3LRL5              	100.00%
Bootstrap support for F6X5M5 as seed ortholog is 100%.
Bootstrap support for A3LRL5 as seed ortholog is 100%.

Group of orthologs #972. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.stipitis:175

F6TPA2              	100.00%		A3LZB0              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for A3LZB0 as seed ortholog is 100%.

Group of orthologs #973. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.stipitis:58

F6Z8G0              	100.00%		A3LYH8              	100.00%
Bootstrap support for F6Z8G0 as seed ortholog is 80%.
Bootstrap support for A3LYH8 as seed ortholog is 93%.

Group of orthologs #974. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.stipitis:175

F7ASJ4              	100.00%		A3LX85              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for A3LX85 as seed ortholog is 100%.

Group of orthologs #975. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:119

H2XMA1              	100.00%		A3M0A3              	100.00%
F6QIM1              	6.88%		
Bootstrap support for H2XMA1 as seed ortholog is 99%.
Bootstrap support for A3M0A3 as seed ortholog is 100%.

Group of orthologs #976. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.stipitis:174

F6SW03              	100.00%		A3LVA1              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for A3LVA1 as seed ortholog is 100%.

Group of orthologs #977. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:173

F6Q9D5              	100.00%		A3GG25              	100.00%
F6ZYB8              	28.94%		A3LZD9              	18.19%
F6RCP1              	14.47%		
Bootstrap support for F6Q9D5 as seed ortholog is 98%.
Bootstrap support for A3GG25 as seed ortholog is 100%.

Group of orthologs #978. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:70

F6U062              	100.00%		A3LR58              	100.00%
F6USW1              	15.36%		A3LWS3              	52.44%
Bootstrap support for F6U062 as seed ortholog is 96%.
Bootstrap support for A3LR58 as seed ortholog is 92%.

Group of orthologs #979. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:173

H2XZ04              	100.00%		A3LZE5              	100.00%
                    	       		A3LUT9              	41.93%
Bootstrap support for H2XZ04 as seed ortholog is 94%.
Bootstrap support for A3LZE5 as seed ortholog is 100%.

Group of orthologs #980. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:41

F6RD19              	100.00%		A3LQA8              	100.00%
Bootstrap support for F6RD19 as seed ortholog is 92%.
Bootstrap support for A3LQA8 as seed ortholog is 82%.

Group of orthologs #981. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.stipitis:173

Q86SD3              	100.00%		A3LV96              	100.00%
Bootstrap support for Q86SD3 as seed ortholog is 99%.
Bootstrap support for A3LV96 as seed ortholog is 100%.

Group of orthologs #982. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.stipitis:122

F6PK80              	100.00%		A3LMX7              	100.00%
F6QWK4              	15.53%		A3GF91              	5.69%
Bootstrap support for F6PK80 as seed ortholog is 100%.
Bootstrap support for A3LMX7 as seed ortholog is 99%.

Group of orthologs #983. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.stipitis:172

H2XKH3              	100.00%		A3LPH1              	100.00%
                    	       		A3LN44              	12.29%
Bootstrap support for H2XKH3 as seed ortholog is 63%.
Alternative seed ortholog is F6ZID3 (11 bits away from this cluster)
Bootstrap support for A3LPH1 as seed ortholog is 100%.

Group of orthologs #984. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.stipitis:172

F6WUG3              	100.00%		A3GH77              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for A3GH77 as seed ortholog is 100%.

Group of orthologs #985. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:172

F6WGS7              	100.00%		A3LU25              	100.00%
Bootstrap support for F6WGS7 as seed ortholog is 99%.
Bootstrap support for A3LU25 as seed ortholog is 100%.

Group of orthologs #986. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:172

H2XPM9              	100.00%		A3LVN0              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 100%.
Bootstrap support for A3LVN0 as seed ortholog is 100%.

Group of orthologs #987. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.stipitis:171

F6V437              	100.00%		A3GF63              	100.00%
Bootstrap support for F6V437 as seed ortholog is 100%.
Bootstrap support for A3GF63 as seed ortholog is 100%.

Group of orthologs #988. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.stipitis:171

F6UFA9              	100.00%		A3LVF9              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for A3LVF9 as seed ortholog is 100%.

Group of orthologs #989. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.stipitis:171

F6ZQX9              	100.00%		A3GGB0              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for A3GGB0 as seed ortholog is 100%.

Group of orthologs #990. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.stipitis:171

F6U8M8              	100.00%		A3LZE7              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 94%.
Bootstrap support for A3LZE7 as seed ortholog is 100%.

Group of orthologs #991. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.stipitis:171

F6WV80              	100.00%		A3LVN1              	100.00%
Bootstrap support for F6WV80 as seed ortholog is 100%.
Bootstrap support for A3LVN1 as seed ortholog is 100%.

Group of orthologs #992. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.stipitis:171

Q4H3S6              	100.00%		A3LRK0              	100.00%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for A3LRK0 as seed ortholog is 100%.

Group of orthologs #993. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:170

F6TQ12              	100.00%		A3LN05              	100.00%
Bootstrap support for F6TQ12 as seed ortholog is 100%.
Bootstrap support for A3LN05 as seed ortholog is 100%.

Group of orthologs #994. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:170

F6TC91              	100.00%		A3LR76              	100.00%
Bootstrap support for F6TC91 as seed ortholog is 100%.
Bootstrap support for A3LR76 as seed ortholog is 100%.

Group of orthologs #995. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:170

F6UXH9              	100.00%		A3LN15              	100.00%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for A3LN15 as seed ortholog is 100%.

Group of orthologs #996. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:170

F6RED0              	100.00%		A3LXH5              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for A3LXH5 as seed ortholog is 100%.

Group of orthologs #997. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:170

F6S8Z0              	100.00%		A3M0I4              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 99%.
Bootstrap support for A3M0I4 as seed ortholog is 100%.

Group of orthologs #998. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:170

F6YWB6              	100.00%		A3GGP2              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for A3GGP2 as seed ortholog is 100%.

Group of orthologs #999. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:107

F6YLC1              	100.00%		A3GI98              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 100%.
Bootstrap support for A3GI98 as seed ortholog is 99%.

Group of orthologs #1000. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.stipitis:120

H2Y1Y8              	100.00%		A3LT69              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for A3LT69 as seed ortholog is 100%.

Group of orthologs #1001. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.stipitis:169

F7BJZ5              	100.00%		A3LVT6              	100.00%
F7B4M8              	8.99%		
F7BE27              	7.58%		
F6Y8L3              	7.16%		
Bootstrap support for F7BJZ5 as seed ortholog is 100%.
Bootstrap support for A3LVT6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.stipitis:106

F7BH38              	100.00%		A3LRG2              	100.00%
F6UCD8              	17.36%		
Bootstrap support for F7BH38 as seed ortholog is 100%.
Bootstrap support for A3LRG2 as seed ortholog is 99%.

Group of orthologs #1003. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:169

H2XNN8              	100.00%		A3LQ20              	100.00%
                    	       		A3LN10              	30.82%
Bootstrap support for H2XNN8 as seed ortholog is 99%.
Bootstrap support for A3LQ20 as seed ortholog is 100%.

Group of orthologs #1004. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.stipitis:169

F6QID5              	100.00%		A3LPF8              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for A3LPF8 as seed ortholog is 100%.

Group of orthologs #1005. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.stipitis:169

F6PMD1              	100.00%		A3LV46              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for A3LV46 as seed ortholog is 100%.

Group of orthologs #1006. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.stipitis:169

F6S2C6              	100.00%		A3LV58              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for A3LV58 as seed ortholog is 100%.

Group of orthologs #1007. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.stipitis:169

F7ASH4              	100.00%		A3LMY8              	100.00%
Bootstrap support for F7ASH4 as seed ortholog is 100%.
Bootstrap support for A3LMY8 as seed ortholog is 100%.

Group of orthologs #1008. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:17

F6YRW6              	100.00%		A3LY10              	100.00%
F6YR14              	29.08%		A3GHU5              	24.06%
F6TBD1              	11.91%		A3M0N4              	10.21%
F6ZLA6              	8.94%		A3LQQ5              	8.96%
                    	       		A3M0N3              	8.23%
                    	       		A3GHF2              	8.12%
                    	       		A3M0B9              	8.02%
                    	       		A3LRJ4              	6.98%
                    	       		F2Z662              	6.98%
                    	       		A3LZS0              	6.77%
                    	       		F2Z690              	6.35%
                    	       		A3GES9              	6.25%
                    	       		F2Z689              	6.25%
                    	       		A3GIE8              	5.52%
                    	       		A3LSJ9              	5.42%
Bootstrap support for F6YRW6 as seed ortholog is 92%.
Bootstrap support for A3LY10 as seed ortholog is 61%.
Alternative seed ortholog is A3LNF5 (17 bits away from this cluster)

Group of orthologs #1009. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.stipitis:168

F6XYV2              	100.00%		A3LVH0              	100.00%
Bootstrap support for F6XYV2 as seed ortholog is 100%.
Bootstrap support for A3LVH0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.stipitis:168

Q1RLA5              	100.00%		A3GG10              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for A3GG10 as seed ortholog is 100%.

Group of orthologs #1011. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:168

Q1RL49              	100.00%		A3GHG7              	100.00%
Bootstrap support for Q1RL49 as seed ortholog is 96%.
Bootstrap support for A3GHG7 as seed ortholog is 100%.

Group of orthologs #1012. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.stipitis:167

F6TZK8              	100.00%		A3LZH1              	100.00%
Bootstrap support for F6TZK8 as seed ortholog is 100%.
Bootstrap support for A3LZH1 as seed ortholog is 100%.

Group of orthologs #1013. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.stipitis:167

F6WEC9              	100.00%		A3LXW6              	100.00%
Bootstrap support for F6WEC9 as seed ortholog is 100%.
Bootstrap support for A3LXW6 as seed ortholog is 100%.

Group of orthologs #1014. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.stipitis:167

F7AFF3              	100.00%		A3LNS5              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for A3LNS5 as seed ortholog is 100%.

Group of orthologs #1015. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.stipitis:167

H2XUQ0              	100.00%		A3LT53              	100.00%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for A3LT53 as seed ortholog is 100%.

Group of orthologs #1016. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.stipitis:166

F6UMM5              	100.00%		A3LN33              	100.00%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for A3LN33 as seed ortholog is 100%.

Group of orthologs #1017. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.stipitis:166

F6QBM2              	100.00%		A3M097              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for A3M097 as seed ortholog is 100%.

Group of orthologs #1018. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:166

F6VG38              	100.00%		A3LW35              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 98%.
Bootstrap support for A3LW35 as seed ortholog is 100%.

Group of orthologs #1019. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.stipitis:14

F7API1              	100.00%		A3LMZ6              	100.00%
Bootstrap support for F7API1 as seed ortholog is 99%.
Bootstrap support for A3LMZ6 as seed ortholog is 64%.
Alternative seed ortholog is A3LT62 (14 bits away from this cluster)

Group of orthologs #1020. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.stipitis:166

F7AG43              	100.00%		A3LV74              	100.00%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for A3LV74 as seed ortholog is 100%.

Group of orthologs #1021. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.stipitis:79

F6PJV8              	100.00%		A3LRK3              	100.00%
Bootstrap support for F6PJV8 as seed ortholog is 88%.
Bootstrap support for A3LRK3 as seed ortholog is 99%.

Group of orthologs #1022. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.stipitis:165

F6U1Z4              	100.00%		A3LVU3              	100.00%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for A3LVU3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.stipitis:165

F6Z465              	100.00%		A3GFK1              	100.00%
Bootstrap support for F6Z465 as seed ortholog is 67%.
Alternative seed ortholog is F6WTM4 (19 bits away from this cluster)
Bootstrap support for A3GFK1 as seed ortholog is 100%.

Group of orthologs #1024. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.stipitis:165

F7BMH5              	100.00%		A3LWU2              	100.00%
Bootstrap support for F7BMH5 as seed ortholog is 100%.
Bootstrap support for A3LWU2 as seed ortholog is 100%.

Group of orthologs #1025. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:114

H2Y0A0              	100.00%		A3LTJ0              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 99%.
Bootstrap support for A3LTJ0 as seed ortholog is 99%.

Group of orthologs #1026. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.stipitis:164

F7A429              	100.00%		A3GIF0              	100.00%
                    	       		P34736              	26.57%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for A3GIF0 as seed ortholog is 100%.

Group of orthologs #1027. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.stipitis:164

F6URQ9              	100.00%		A3GHC4              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for A3GHC4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.stipitis:164

F6R255              	100.00%		A3LX03              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #1029. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.stipitis:36

H2XKC9              	100.00%		A3LQ29              	100.00%
Bootstrap support for H2XKC9 as seed ortholog is 100%.
Bootstrap support for A3LQ29 as seed ortholog is 78%.

Group of orthologs #1030. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:75

H2XWF2              	100.00%		A3LRA1              	100.00%
Bootstrap support for H2XWF2 as seed ortholog is 97%.
Bootstrap support for A3LRA1 as seed ortholog is 96%.

Group of orthologs #1031. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:163

F6RBK2              	100.00%		A3LQ86              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 94%.
Bootstrap support for A3LQ86 as seed ortholog is 100%.

Group of orthologs #1032. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.stipitis:163

F6RE18              	100.00%		A3M0G0              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for A3M0G0 as seed ortholog is 100%.

Group of orthologs #1033. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.stipitis:163

F6ZBY5              	100.00%		A3LVR8              	100.00%
Bootstrap support for F6ZBY5 as seed ortholog is 100%.
Bootstrap support for A3LVR8 as seed ortholog is 100%.

Group of orthologs #1034. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.stipitis:163

H2XUK5              	100.00%		A3LSV9              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 100%.
Bootstrap support for A3LSV9 as seed ortholog is 100%.

Group of orthologs #1035. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:65

H2XXR6              	100.00%		A3LUB0              	100.00%
Bootstrap support for H2XXR6 as seed ortholog is 92%.
Bootstrap support for A3LUB0 as seed ortholog is 89%.

Group of orthologs #1036. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.stipitis:162

F6Q9P1              	100.00%		A3GFC5              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for A3GFC5 as seed ortholog is 100%.

Group of orthologs #1037. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.stipitis:161

F6TNN9              	100.00%		A3LZT4              	100.00%
F6Z145              	8.08%		
Bootstrap support for F6TNN9 as seed ortholog is 74%.
Alternative seed ortholog is F7BA12 (1 bits away from this cluster)
Bootstrap support for A3LZT4 as seed ortholog is 100%.

Group of orthologs #1038. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.stipitis:54

H2XKN2              	100.00%		A3LWZ7              	100.00%
                    	       		A3LRW8              	13.07%
Bootstrap support for H2XKN2 as seed ortholog is 92%.
Bootstrap support for A3LWZ7 as seed ortholog is 92%.

Group of orthologs #1039. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.stipitis:161

F6Q2U2              	100.00%		A3LUK3              	100.00%
Bootstrap support for F6Q2U2 as seed ortholog is 100%.
Bootstrap support for A3LUK3 as seed ortholog is 100%.

Group of orthologs #1040. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.stipitis:161

F6Y3X0              	100.00%		A3LN29              	100.00%
Bootstrap support for F6Y3X0 as seed ortholog is 100%.
Bootstrap support for A3LN29 as seed ortholog is 100%.

Group of orthologs #1041. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.stipitis:161

F6UK51              	100.00%		A3LWU4              	100.00%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for A3LWU4 as seed ortholog is 100%.

Group of orthologs #1042. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.stipitis:161

F6ZQ58              	100.00%		A3GFY9              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for A3GFY9 as seed ortholog is 100%.

Group of orthologs #1043. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.stipitis:161

H2XT65              	100.00%		A3LQF3              	100.00%
Bootstrap support for H2XT65 as seed ortholog is 100%.
Bootstrap support for A3LQF3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.stipitis:160

F6XPS9              	100.00%		A3GFI7              	100.00%
Bootstrap support for F6XPS9 as seed ortholog is 100%.
Bootstrap support for A3GFI7 as seed ortholog is 100%.

Group of orthologs #1045. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.stipitis:160

F7B2L3              	100.00%		A3GHH8              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for A3GHH8 as seed ortholog is 100%.

Group of orthologs #1046. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 S.stipitis:62

F6VBG8              	100.00%		A3LNS1              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for A3LNS1 as seed ortholog is 89%.

Group of orthologs #1047. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 S.stipitis:159

F7AYB2              	100.00%		A3LZ66              	100.00%
Bootstrap support for F7AYB2 as seed ortholog is 100%.
Bootstrap support for A3LZ66 as seed ortholog is 100%.

Group of orthologs #1048. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 S.stipitis:88

H2XZC9              	100.00%		A3LUQ7              	100.00%
Bootstrap support for H2XZC9 as seed ortholog is 100%.
Bootstrap support for A3LUQ7 as seed ortholog is 97%.

Group of orthologs #1049. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

H2XR44              	100.00%		A3LMU3              	100.00%
F6UDM9              	10.09%		A3GI73              	11.74%
Bootstrap support for H2XR44 as seed ortholog is 100%.
Bootstrap support for A3LMU3 as seed ortholog is 100%.

Group of orthologs #1050. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

F7B6W8              	100.00%		A3GG06              	100.00%
                    	       		A3LSH1              	8.65%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for A3GG06 as seed ortholog is 100%.

Group of orthologs #1051. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

F6RLX1              	100.00%		A3GHC1              	100.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for A3GHC1 as seed ortholog is 100%.

Group of orthologs #1052. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

F6R6F3              	100.00%		A3LNK1              	100.00%
Bootstrap support for F6R6F3 as seed ortholog is 100%.
Bootstrap support for A3LNK1 as seed ortholog is 100%.

Group of orthologs #1053. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.stipitis:17

F6PIE8              	100.00%		A3LSC5              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 99%.
Bootstrap support for A3LSC5 as seed ortholog is 67%.
Alternative seed ortholog is A3LU34 (17 bits away from this cluster)

Group of orthologs #1054. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

F6SK91              	100.00%		A3GHQ3              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for A3GHQ3 as seed ortholog is 100%.

Group of orthologs #1055. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

F6WPY5              	100.00%		A3GFS4              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for A3GFS4 as seed ortholog is 100%.

Group of orthologs #1056. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.stipitis:158

F6ZSB0              	100.00%		A3LWT3              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for A3LWT3 as seed ortholog is 100%.

Group of orthologs #1057. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:157

F6RZU6              	100.00%		A3GHM1              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for A3GHM1 as seed ortholog is 100%.

Group of orthologs #1058. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:157

F6X2Y1              	100.00%		A3GFJ9              	100.00%
Bootstrap support for F6X2Y1 as seed ortholog is 100%.
Bootstrap support for A3GFJ9 as seed ortholog is 100%.

Group of orthologs #1059. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:157

H2XMX2              	100.00%		A3LTJ4              	100.00%
Bootstrap support for H2XMX2 as seed ortholog is 100%.
Bootstrap support for A3LTJ4 as seed ortholog is 100%.

Group of orthologs #1060. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.stipitis:157

H2XVN4              	100.00%		A3LUZ3              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for A3LUZ3 as seed ortholog is 100%.

Group of orthologs #1061. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:100

F6YP78              	100.00%		A3GHP8              	100.00%
F7A9X4              	100.00%		A3GHE5              	100.00%
H2Y1T7              	100.00%		A3LSW3              	100.00%
F6WN12              	72.54%		A3LTS7              	14.53%
F6ZSG1              	68.87%		
F6ZS22              	60.61%		
F6YJ55              	45.02%		
F6YJ69              	43.61%		
F6WY28              	41.03%		
F6XMJ7              	36.95%		
F6VYA1              	33.00%		
F6YYX0              	31.53%		
F6WDV1              	31.39%		
F6TBT3              	27.83%		
F7AGY9              	25.37%		
F7B629              	25.03%		
F6WSG2              	20.84%		
F6YJM6              	18.30%		
F6W4G0              	13.47%		
Bootstrap support for F6YP78 as seed ortholog is 100%.
Bootstrap support for F7A9X4 as seed ortholog is 100%.
Bootstrap support for H2Y1T7 as seed ortholog is 100%.
Bootstrap support for A3GHP8 as seed ortholog is 99%.
Bootstrap support for A3GHE5 as seed ortholog is 95%.
Bootstrap support for A3LSW3 as seed ortholog is 95%.

Group of orthologs #1062. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.stipitis:156

F6R9S1              	100.00%		A3LVS5              	100.00%
Bootstrap support for F6R9S1 as seed ortholog is 82%.
Bootstrap support for A3LVS5 as seed ortholog is 100%.

Group of orthologs #1063. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

F6Y011              	100.00%		A3LMR8              	100.00%
Bootstrap support for F6Y011 as seed ortholog is 100%.
Bootstrap support for A3LMR8 as seed ortholog is 100%.

Group of orthologs #1064. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

F6TA53              	100.00%		A3LY51              	100.00%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for A3LY51 as seed ortholog is 100%.

Group of orthologs #1065. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

F6VII3              	100.00%		A3LY48              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for A3LY48 as seed ortholog is 100%.

Group of orthologs #1066. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

F7AUY7              	100.00%		A3LQU1              	100.00%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for A3LQU1 as seed ortholog is 100%.

Group of orthologs #1067. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:100

F7B3P4              	100.00%		A3LRM3              	100.00%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for A3LRM3 as seed ortholog is 98%.

Group of orthologs #1068. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:88

H2XQC1              	100.00%		A3GF04              	100.00%
Bootstrap support for H2XQC1 as seed ortholog is 98%.
Bootstrap support for A3GF04 as seed ortholog is 99%.

Group of orthologs #1069. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

F7ATS3              	100.00%		A3LTT4              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for A3LTT4 as seed ortholog is 100%.

Group of orthologs #1070. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

H2Y197              	100.00%		A3LQN2              	100.00%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for A3LQN2 as seed ortholog is 100%.

Group of orthologs #1071. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.stipitis:156

Q1RL40              	100.00%		A3LZ78              	100.00%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for A3LZ78 as seed ortholog is 100%.

Group of orthologs #1072. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.stipitis:155

F7ADG5              	100.00%		A3LPU2              	100.00%
F6Y9G9              	92.51%		A3LWL7              	11.53%
Bootstrap support for F7ADG5 as seed ortholog is 100%.
Bootstrap support for A3LPU2 as seed ortholog is 100%.

Group of orthologs #1073. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.stipitis:155

F6SWH7              	100.00%		A3LRT6              	100.00%
Bootstrap support for F6SWH7 as seed ortholog is 100%.
Bootstrap support for A3LRT6 as seed ortholog is 100%.

Group of orthologs #1074. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.stipitis:155

H2XLK7              	100.00%		A3GHQ2              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 100%.
Bootstrap support for A3GHQ2 as seed ortholog is 100%.

Group of orthologs #1075. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.stipitis:155

F6YLZ5              	100.00%		A3LXY9              	100.00%
Bootstrap support for F6YLZ5 as seed ortholog is 100%.
Bootstrap support for A3LXY9 as seed ortholog is 100%.

Group of orthologs #1076. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:154

F6PLX2              	100.00%		A3LYU0              	100.00%
                    	       		A3LQR7              	52.06%
Bootstrap support for F6PLX2 as seed ortholog is 100%.
Bootstrap support for A3LYU0 as seed ortholog is 100%.

Group of orthologs #1077. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:154

F6ZUD7              	100.00%		A3GH88              	100.00%
                    	       		A3GHQ6              	28.96%
Bootstrap support for F6ZUD7 as seed ortholog is 100%.
Bootstrap support for A3GH88 as seed ortholog is 100%.

Group of orthologs #1078. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:154

F6VJL7              	100.00%		A3GHY7              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for A3GHY7 as seed ortholog is 100%.

Group of orthologs #1079. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:154

F6T2R5              	100.00%		A3LUD5              	100.00%
Bootstrap support for F6T2R5 as seed ortholog is 100%.
Bootstrap support for A3LUD5 as seed ortholog is 100%.

Group of orthologs #1080. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:154

F6T6F5              	100.00%		A3LUV2              	100.00%
Bootstrap support for F6T6F5 as seed ortholog is 100%.
Bootstrap support for A3LUV2 as seed ortholog is 100%.

Group of orthologs #1081. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.stipitis:154

F6ZH66              	100.00%		A3LUL4              	100.00%
Bootstrap support for F6ZH66 as seed ortholog is 100%.
Bootstrap support for A3LUL4 as seed ortholog is 100%.

Group of orthologs #1082. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:105

H2XNZ7              	100.00%		A3LZW2              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 99%.
Bootstrap support for A3LZW2 as seed ortholog is 100%.

Group of orthologs #1083. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:153

F6S7T3              	100.00%		A3LP82              	100.00%
Bootstrap support for F6S7T3 as seed ortholog is 100%.
Bootstrap support for A3LP82 as seed ortholog is 100%.

Group of orthologs #1084. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:66

F6RKQ2              	100.00%		A3LZK6              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for A3LZK6 as seed ortholog is 95%.

Group of orthologs #1085. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:153

F6X3L7              	100.00%		A3LQS5              	100.00%
Bootstrap support for F6X3L7 as seed ortholog is 100%.
Bootstrap support for A3LQS5 as seed ortholog is 100%.

Group of orthologs #1086. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.stipitis:153

F6XG50              	100.00%		A3LSE6              	100.00%
Bootstrap support for F6XG50 as seed ortholog is 100%.
Bootstrap support for A3LSE6 as seed ortholog is 100%.

Group of orthologs #1087. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.stipitis:152

F6QE62              	100.00%		A3LS34              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for A3LS34 as seed ortholog is 100%.

Group of orthologs #1088. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.stipitis:152

F6Z998              	100.00%		A3LQF1              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for A3LQF1 as seed ortholog is 100%.

Group of orthologs #1089. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.stipitis:152

F7BMB7              	100.00%		A3LTC4              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 98%.
Bootstrap support for A3LTC4 as seed ortholog is 100%.

Group of orthologs #1090. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:151

F6X0N8              	100.00%		A3LXS1              	100.00%
L7N0S6              	87.32%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for A3LXS1 as seed ortholog is 100%.

Group of orthologs #1091. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:151

F6V5I4              	100.00%		A3GHC2              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for A3GHC2 as seed ortholog is 100%.

Group of orthologs #1092. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:151

F6Z8U5              	100.00%		A3LP72              	100.00%
Bootstrap support for F6Z8U5 as seed ortholog is 100%.
Bootstrap support for A3LP72 as seed ortholog is 100%.

Group of orthologs #1093. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:151

H2XTJ5              	100.00%		A3LNF8              	100.00%
Bootstrap support for H2XTJ5 as seed ortholog is 100%.
Bootstrap support for A3LNF8 as seed ortholog is 100%.

Group of orthologs #1094. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.stipitis:151

H2XSK2              	100.00%		A3LQV6              	100.00%
Bootstrap support for H2XSK2 as seed ortholog is 100%.
Bootstrap support for A3LQV6 as seed ortholog is 100%.

Group of orthologs #1095. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.stipitis:150

H2Y0B3              	100.00%		A3LYQ8              	100.00%
F6ULQ2              	6.58%		
Bootstrap support for H2Y0B3 as seed ortholog is 100%.
Bootstrap support for A3LYQ8 as seed ortholog is 100%.

Group of orthologs #1096. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:82

F6TKH9              	100.00%		A3GGM6              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 99%.
Bootstrap support for A3GGM6 as seed ortholog is 99%.

Group of orthologs #1097. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.stipitis:150

F6WAT8              	100.00%		A3GG28              	100.00%
Bootstrap support for F6WAT8 as seed ortholog is 100%.
Bootstrap support for A3GG28 as seed ortholog is 100%.

Group of orthologs #1098. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.stipitis:94

F7AZA1              	100.00%		A3LQL1              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for A3LQL1 as seed ortholog is 99%.

Group of orthologs #1099. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.stipitis:150

H2XTN0              	100.00%		A3LWK2              	100.00%
Bootstrap support for H2XTN0 as seed ortholog is 100%.
Bootstrap support for A3LWK2 as seed ortholog is 100%.

Group of orthologs #1100. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:149

Q5VHU5              	100.00%		A3LSR0              	100.00%
Q5VHU3              	32.94%		A3LUG7              	26.30%
                    	       		A3LWZ8              	13.87%
Bootstrap support for Q5VHU5 as seed ortholog is 98%.
Bootstrap support for A3LSR0 as seed ortholog is 100%.

Group of orthologs #1101. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:82

F6WB20              	100.00%		A3LWC2              	100.00%
H2XJR2              	15.30%		
Bootstrap support for F6WB20 as seed ortholog is 99%.
Bootstrap support for A3LWC2 as seed ortholog is 99%.

Group of orthologs #1102. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.stipitis:149

F6Q4X5              	100.00%		A3LX65              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for A3LX65 as seed ortholog is 100%.

Group of orthologs #1103. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.stipitis:149

F6SS76              	100.00%		A3LX88              	100.00%
Bootstrap support for F6SS76 as seed ortholog is 100%.
Bootstrap support for A3LX88 as seed ortholog is 100%.

Group of orthologs #1104. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.stipitis:149

F6VN53              	100.00%		A3LUC2              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for A3LUC2 as seed ortholog is 100%.

Group of orthologs #1105. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.stipitis:149

F6W510              	100.00%		A3LXH8              	100.00%
Bootstrap support for F6W510 as seed ortholog is 100%.
Bootstrap support for A3LXH8 as seed ortholog is 100%.

Group of orthologs #1106. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:31

F6UTK0              	100.00%		A3M0M8              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 99%.
Bootstrap support for A3M0M8 as seed ortholog is 80%.

Group of orthologs #1107. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.stipitis:149

F6YMT8              	100.00%		A3LVF4              	100.00%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for A3LVF4 as seed ortholog is 100%.

Group of orthologs #1108. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:149

F6YNG6              	100.00%		A3LVH4              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 98%.
Bootstrap support for A3LVH4 as seed ortholog is 100%.

Group of orthologs #1109. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:149

Q4H3S8              	100.00%		A3LUE8              	100.00%
Bootstrap support for Q4H3S8 as seed ortholog is 94%.
Bootstrap support for A3LUE8 as seed ortholog is 100%.

Group of orthologs #1110. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.stipitis:148

F6QWU8              	100.00%		A3LQW0              	100.00%
Bootstrap support for F6QWU8 as seed ortholog is 100%.
Bootstrap support for A3LQW0 as seed ortholog is 100%.

Group of orthologs #1111. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.stipitis:148

H2XL93              	100.00%		A3GGM1              	100.00%
Bootstrap support for H2XL93 as seed ortholog is 100%.
Bootstrap support for A3GGM1 as seed ortholog is 100%.

Group of orthologs #1112. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:147

F6R6J0              	100.00%		A3LPE7              	100.00%
Bootstrap support for F6R6J0 as seed ortholog is 100%.
Bootstrap support for A3LPE7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:147

F6TSV6              	100.00%		A3GI05              	100.00%
Bootstrap support for F6TSV6 as seed ortholog is 100%.
Bootstrap support for A3GI05 as seed ortholog is 100%.

Group of orthologs #1114. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:147

F6WAY8              	100.00%		A3LQB4              	100.00%
Bootstrap support for F6WAY8 as seed ortholog is 92%.
Bootstrap support for A3LQB4 as seed ortholog is 100%.

Group of orthologs #1115. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:65

F6V4L6              	100.00%		A3LSX0              	100.00%
Bootstrap support for F6V4L6 as seed ortholog is 100%.
Bootstrap support for A3LSX0 as seed ortholog is 99%.

Group of orthologs #1116. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:147

F6XTV8              	100.00%		A3LRC5              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for A3LRC5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:147

F7AMW5              	100.00%		A3LQJ0              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for A3LQJ0 as seed ortholog is 100%.

Group of orthologs #1118. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:147

F6Y7V1              	100.00%		A3M071              	100.00%
Bootstrap support for F6Y7V1 as seed ortholog is 100%.
Bootstrap support for A3M071 as seed ortholog is 100%.

Group of orthologs #1119. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.stipitis:147

F7B480              	100.00%		A3M090              	100.00%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for A3M090 as seed ortholog is 100%.

Group of orthologs #1120. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:74

H2XP52              	100.00%		A3LY37              	100.00%
F6QZM4              	44.72%		
Bootstrap support for H2XP52 as seed ortholog is 99%.
Bootstrap support for A3LY37 as seed ortholog is 99%.

Group of orthologs #1121. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.stipitis:146

F6PK54              	100.00%		A3GH99              	100.00%
Bootstrap support for F6PK54 as seed ortholog is 100%.
Bootstrap support for A3GH99 as seed ortholog is 100%.

Group of orthologs #1122. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.stipitis:146

F6R0P0              	100.00%		A3LZ30              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #1123. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.stipitis:146

F6WH15              	100.00%		A3LNE4              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for A3LNE4 as seed ortholog is 100%.

Group of orthologs #1124. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.stipitis:146

H2XWQ2              	100.00%		A3LR91              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for A3LR91 as seed ortholog is 100%.

Group of orthologs #1125. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.stipitis:145

F6PHR7              	100.00%		A3LSB8              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for A3LSB8 as seed ortholog is 100%.

Group of orthologs #1126. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.stipitis:145

F6U095              	100.00%		A3GGT1              	100.00%
Bootstrap support for F6U095 as seed ortholog is 100%.
Bootstrap support for A3GGT1 as seed ortholog is 100%.

Group of orthologs #1127. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.stipitis:145

F6R4T5              	100.00%		A3LXR3              	100.00%
Bootstrap support for F6R4T5 as seed ortholog is 100%.
Bootstrap support for A3LXR3 as seed ortholog is 100%.

Group of orthologs #1128. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.stipitis:98

F7ATN8              	100.00%		A3GH31              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 91%.
Bootstrap support for A3GH31 as seed ortholog is 100%.

Group of orthologs #1129. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.stipitis:145

H2Y1H7              	100.00%		A3LVC5              	100.00%
Bootstrap support for H2Y1H7 as seed ortholog is 100%.
Bootstrap support for A3LVC5 as seed ortholog is 100%.

Group of orthologs #1130. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.stipitis:11

F6WW36              	100.00%		A3LSN6              	100.00%
H2XRG7              	20.17%		
Bootstrap support for F6WW36 as seed ortholog is 90%.
Bootstrap support for A3LSN6 as seed ortholog is 74%.
Alternative seed ortholog is A3LZU7 (11 bits away from this cluster)

Group of orthologs #1131. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.stipitis:144

F6RD78              	100.00%		A3LSA8              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 100%.
Bootstrap support for A3LSA8 as seed ortholog is 100%.

Group of orthologs #1132. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.stipitis:144

F6X0F3              	100.00%		A3GFL9              	100.00%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for A3GFL9 as seed ortholog is 100%.

Group of orthologs #1133. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.stipitis:144

F6U8Q9              	100.00%		A3LYF5              	100.00%
Bootstrap support for F6U8Q9 as seed ortholog is 51%.
Alternative seed ortholog is F6R8G4 (2 bits away from this cluster)
Bootstrap support for A3LYF5 as seed ortholog is 100%.

Group of orthologs #1134. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.stipitis:144

F6YA02              	100.00%		A3LXF4              	100.00%
Bootstrap support for F6YA02 as seed ortholog is 100%.
Bootstrap support for A3LXF4 as seed ortholog is 100%.

Group of orthologs #1135. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.stipitis:143

F7A1T4              	100.00%		A3GG87              	100.00%
Bootstrap support for F7A1T4 as seed ortholog is 100%.
Bootstrap support for A3GG87 as seed ortholog is 100%.

Group of orthologs #1136. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.stipitis:143

F6ZPU3              	100.00%		A3GI95              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for A3GI95 as seed ortholog is 100%.

Group of orthologs #1137. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.stipitis:143

F7BDE0              	100.00%		A3LYP2              	100.00%
Bootstrap support for F7BDE0 as seed ortholog is 100%.
Bootstrap support for A3LYP2 as seed ortholog is 100%.

Group of orthologs #1138. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:96

F7AAN8              	100.00%		A3GG48              	100.00%
H2XYH1              	65.41%		A3GG47              	26.99%
Bootstrap support for F7AAN8 as seed ortholog is 99%.
Bootstrap support for A3GG48 as seed ortholog is 99%.

Group of orthologs #1139. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.stipitis:142

F6WPS3              	100.00%		A3LPC0              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for A3LPC0 as seed ortholog is 100%.

Group of orthologs #1140. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.stipitis:142

F6YSG2              	100.00%		A3GH43              	100.00%
Bootstrap support for F6YSG2 as seed ortholog is 100%.
Bootstrap support for A3GH43 as seed ortholog is 100%.

Group of orthologs #1141. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.stipitis:142

F6WTV6              	100.00%		A3LUE2              	100.00%
Bootstrap support for F6WTV6 as seed ortholog is 100%.
Bootstrap support for A3LUE2 as seed ortholog is 100%.

Group of orthologs #1142. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.stipitis:142

F6XLX0              	100.00%		A3LUT3              	100.00%
Bootstrap support for F6XLX0 as seed ortholog is 93%.
Bootstrap support for A3LUT3 as seed ortholog is 100%.

Group of orthologs #1143. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 S.stipitis:141

F6T485              	100.00%		A3LPF1              	100.00%
Bootstrap support for F6T485 as seed ortholog is 86%.
Bootstrap support for A3LPF1 as seed ortholog is 100%.

Group of orthologs #1144. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.stipitis:141

F6TIM2              	100.00%		A3LNJ3              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for A3LNJ3 as seed ortholog is 100%.

Group of orthologs #1145. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.stipitis:140

F6Y2U7              	100.00%		A3LSI8              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for A3LSI8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.stipitis:99

H2XW02              	100.00%		A3LW18              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for A3LW18 as seed ortholog is 100%.

Group of orthologs #1147. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.stipitis:140

H2XYU1              	100.00%		A3LZG2              	100.00%
Bootstrap support for H2XYU1 as seed ortholog is 100%.
Bootstrap support for A3LZG2 as seed ortholog is 100%.

Group of orthologs #1148. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.stipitis:139

F6SAX8              	100.00%		A3LZI5              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for A3LZI5 as seed ortholog is 100%.

Group of orthologs #1149. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.stipitis:139

F6VMC6              	100.00%		A3LTC6              	100.00%
Bootstrap support for F6VMC6 as seed ortholog is 100%.
Bootstrap support for A3LTC6 as seed ortholog is 100%.

Group of orthologs #1150. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.stipitis:139

H2Y184              	100.00%		A3LR02              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for A3LR02 as seed ortholog is 100%.

Group of orthologs #1151. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F7AEB8              	100.00%		A3GF36              	100.00%
F6YPB8              	7.11%		
F6SNY7              	6.98%		
F6SD56              	6.17%		
Bootstrap support for F7AEB8 as seed ortholog is 100%.
Bootstrap support for A3GF36 as seed ortholog is 100%.

Group of orthologs #1152. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6XFM9              	100.00%		A3LTB1              	100.00%
                    	       		A3LN92              	25.10%
Bootstrap support for F6XFM9 as seed ortholog is 100%.
Bootstrap support for A3LTB1 as seed ortholog is 100%.

Group of orthologs #1153. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6TGK6              	100.00%		A3GHD1              	100.00%
Bootstrap support for F6TGK6 as seed ortholog is 100%.
Bootstrap support for A3GHD1 as seed ortholog is 100%.

Group of orthologs #1154. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6YXW3              	100.00%		A3GFQ9              	100.00%
Bootstrap support for F6YXW3 as seed ortholog is 100%.
Bootstrap support for A3GFQ9 as seed ortholog is 100%.

Group of orthologs #1155. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6ZGV0              	100.00%		A3LN21              	100.00%
Bootstrap support for F6ZGV0 as seed ortholog is 100%.
Bootstrap support for A3LN21 as seed ortholog is 100%.

Group of orthologs #1156. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6XNV2              	100.00%		A3LT89              	100.00%
Bootstrap support for F6XNV2 as seed ortholog is 100%.
Bootstrap support for A3LT89 as seed ortholog is 100%.

Group of orthologs #1157. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6Z235              	100.00%		A3LR81              	100.00%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for A3LR81 as seed ortholog is 100%.

Group of orthologs #1158. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

F6YZ22              	100.00%		A3LWK3              	100.00%
Bootstrap support for F6YZ22 as seed ortholog is 100%.
Bootstrap support for A3LWK3 as seed ortholog is 100%.

Group of orthologs #1159. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.stipitis:138

H2Y2E8              	100.00%		A3LPE2              	100.00%
Bootstrap support for H2Y2E8 as seed ortholog is 100%.
Bootstrap support for A3LPE2 as seed ortholog is 100%.

Group of orthologs #1160. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:137

H2XQT4              	100.00%		A3LZ13              	100.00%
F7AM82              	21.82%		
F6QL68              	9.87%		
F6XIK7              	7.59%		
Bootstrap support for H2XQT4 as seed ortholog is 90%.
Bootstrap support for A3LZ13 as seed ortholog is 100%.

Group of orthologs #1161. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:137

F6R1A2              	100.00%		A3LN20              	100.00%
Bootstrap support for F6R1A2 as seed ortholog is 100%.
Bootstrap support for A3LN20 as seed ortholog is 100%.

Group of orthologs #1162. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:137

F6PI87              	100.00%		A3M0D9              	100.00%
Bootstrap support for F6PI87 as seed ortholog is 100%.
Bootstrap support for A3M0D9 as seed ortholog is 100%.

Group of orthologs #1163. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:137

F6T385              	100.00%		A3LZH4              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for A3LZH4 as seed ortholog is 100%.

Group of orthologs #1164. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:137

F6Z8N3              	100.00%		A3GGZ2              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for A3GGZ2 as seed ortholog is 100%.

Group of orthologs #1165. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:137

F6W7Q3              	100.00%		A3LUJ7              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for A3LUJ7 as seed ortholog is 100%.

Group of orthologs #1166. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.stipitis:137

H2XVJ2              	100.00%		A3LVF6              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for A3LVF6 as seed ortholog is 100%.

Group of orthologs #1167. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:136

Q4H329              	100.00%		A3M077              	100.00%
                    	       		A3GGC2              	8.08%
Bootstrap support for Q4H329 as seed ortholog is 100%.
Bootstrap support for A3M077 as seed ortholog is 100%.

Group of orthologs #1168. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.stipitis:136

F6SM47              	100.00%		A3GFM5              	100.00%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for A3GFM5 as seed ortholog is 100%.

Group of orthologs #1169. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.stipitis:6

F6S1K1              	100.00%		A3LZC6              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for A3LZC6 as seed ortholog is 56%.
Alternative seed ortholog is A3GGM8 (6 bits away from this cluster)

Group of orthologs #1170. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:32

F6XDJ2              	100.00%		A3LVX1              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 92%.
Bootstrap support for A3LVX1 as seed ortholog is 79%.

Group of orthologs #1171. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.stipitis:54

F6YL86              	100.00%		A3LUG6              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for A3LUG6 as seed ortholog is 83%.

Group of orthologs #1172. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.stipitis:136

F6WTW2              	100.00%		A3LYM3              	100.00%
Bootstrap support for F6WTW2 as seed ortholog is 100%.
Bootstrap support for A3LYM3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.stipitis:136

H2XR58              	100.00%		A3LQL5              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #1174. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.stipitis:135

F6XHR2              	100.00%		A3LUI1              	100.00%
H2Y369              	29.82%		A3GFS9              	37.62%
F7AHM9              	28.71%		
F6VSV8              	6.53%		
Bootstrap support for F6XHR2 as seed ortholog is 100%.
Bootstrap support for A3LUI1 as seed ortholog is 100%.

Group of orthologs #1175. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:135

F6UTG5              	100.00%		A3GFU8              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 99%.
Bootstrap support for A3GFU8 as seed ortholog is 100%.

Group of orthologs #1176. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.stipitis:135

F6THX7              	100.00%		A3LN95              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for A3LN95 as seed ortholog is 100%.

Group of orthologs #1177. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.stipitis:135

F6PQW9              	100.00%		A3LX75              	100.00%
Bootstrap support for F6PQW9 as seed ortholog is 100%.
Bootstrap support for A3LX75 as seed ortholog is 100%.

Group of orthologs #1178. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:135

H2XPV5              	100.00%		A3LSU6              	100.00%
Bootstrap support for H2XPV5 as seed ortholog is 92%.
Bootstrap support for A3LSU6 as seed ortholog is 100%.

Group of orthologs #1179. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.stipitis:135

H2XXD0              	100.00%		A3LPF7              	100.00%
Bootstrap support for H2XXD0 as seed ortholog is 99%.
Bootstrap support for A3LPF7 as seed ortholog is 100%.

Group of orthologs #1180. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:76

F6RR57              	100.00%		A3LNB4              	100.00%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for A3LNB4 as seed ortholog is 93%.

Group of orthologs #1181. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:134

F6R901              	100.00%		A3LRT7              	100.00%
Bootstrap support for F6R901 as seed ortholog is 100%.
Bootstrap support for A3LRT7 as seed ortholog is 100%.

Group of orthologs #1182. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:134

F6WWT1              	100.00%		A3LPD5              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for A3LPD5 as seed ortholog is 100%.

Group of orthologs #1183. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:134

F6X4K3              	100.00%		A3LRM2              	100.00%
Bootstrap support for F6X4K3 as seed ortholog is 100%.
Bootstrap support for A3LRM2 as seed ortholog is 100%.

Group of orthologs #1184. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.stipitis:134

F7B4V3              	100.00%		A3GIA6              	100.00%
Bootstrap support for F7B4V3 as seed ortholog is 82%.
Bootstrap support for A3GIA6 as seed ortholog is 100%.

Group of orthologs #1185. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:134

H2XL84              	100.00%		A3GGF1              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for A3GGF1 as seed ortholog is 100%.

Group of orthologs #1186. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:134

F7B503              	100.00%		A3LVE0              	100.00%
Bootstrap support for F7B503 as seed ortholog is 100%.
Bootstrap support for A3LVE0 as seed ortholog is 100%.

Group of orthologs #1187. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.stipitis:134

F7B496              	100.00%		A3LW62              	100.00%
Bootstrap support for F7B496 as seed ortholog is 99%.
Bootstrap support for A3LW62 as seed ortholog is 100%.

Group of orthologs #1188. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:63

H2XKM5              	100.00%		A3LX93              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for A3LX93 as seed ortholog is 99%.

Group of orthologs #1189. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.stipitis:134

H2XVJ7              	100.00%		A3LZH3              	100.00%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for A3LZH3 as seed ortholog is 100%.

Group of orthologs #1190. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 S.stipitis:30

F7A7A0              	100.00%		A3LTW9              	100.00%
F6S8Y1              	11.15%		
Bootstrap support for F7A7A0 as seed ortholog is 68%.
Alternative seed ortholog is F6V934 (21 bits away from this cluster)
Bootstrap support for A3LTW9 as seed ortholog is 80%.

Group of orthologs #1191. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.stipitis:132

F6YD46              	100.00%		A3LY58              	100.00%
F6T569              	51.80%		
F6WGU2              	41.49%		
Bootstrap support for F6YD46 as seed ortholog is 97%.
Bootstrap support for A3LY58 as seed ortholog is 100%.

Group of orthologs #1192. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.stipitis:37

F6V8N0              	100.00%		A3LVN6              	100.00%
H2Y092              	10.35%		
Bootstrap support for F6V8N0 as seed ortholog is 100%.
Bootstrap support for A3LVN6 as seed ortholog is 77%.

Group of orthologs #1193. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.stipitis:132

F6X8B5              	100.00%		A3GI03              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for A3GI03 as seed ortholog is 100%.

Group of orthologs #1194. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:70

F6XJX5              	100.00%		A3LPD4              	100.00%
Bootstrap support for F6XJX5 as seed ortholog is 95%.
Bootstrap support for A3LPD4 as seed ortholog is 95%.

Group of orthologs #1195. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F7B963              	100.00%		A3GEY6              	100.00%
F6PI53              	64.00%		
Bootstrap support for F7B963 as seed ortholog is 100%.
Bootstrap support for A3GEY6 as seed ortholog is 100%.

Group of orthologs #1196. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F6S578              	100.00%		A3LNF7              	100.00%
Bootstrap support for F6S578 as seed ortholog is 100%.
Bootstrap support for A3LNF7 as seed ortholog is 100%.

Group of orthologs #1197. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F6VZQ9              	100.00%		A3LR14              	100.00%
Bootstrap support for F6VZQ9 as seed ortholog is 100%.
Bootstrap support for A3LR14 as seed ortholog is 100%.

Group of orthologs #1198. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F6W3C3              	100.00%		A3LRK6              	100.00%
Bootstrap support for F6W3C3 as seed ortholog is 100%.
Bootstrap support for A3LRK6 as seed ortholog is 100%.

Group of orthologs #1199. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F6YB67              	100.00%		A3LNE5              	100.00%
Bootstrap support for F6YB67 as seed ortholog is 100%.
Bootstrap support for A3LNE5 as seed ortholog is 100%.

Group of orthologs #1200. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F6WIL6              	100.00%		A3LV76              	100.00%
Bootstrap support for F6WIL6 as seed ortholog is 100%.
Bootstrap support for A3LV76 as seed ortholog is 100%.

Group of orthologs #1201. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

F6Z897              	100.00%		A3LS70              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for A3LS70 as seed ortholog is 100%.

Group of orthologs #1202. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

H2XM46              	100.00%		A3LPY3              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for A3LPY3 as seed ortholog is 100%.

Group of orthologs #1203. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

H2XRU0              	100.00%		A3LUX9              	100.00%
Bootstrap support for H2XRU0 as seed ortholog is 100%.
Bootstrap support for A3LUX9 as seed ortholog is 100%.

Group of orthologs #1204. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.stipitis:131

H2Y0D5              	100.00%		A3LN46              	100.00%
Bootstrap support for H2Y0D5 as seed ortholog is 100%.
Bootstrap support for A3LN46 as seed ortholog is 100%.

Group of orthologs #1205. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

F6XWH9              	100.00%		A3LUU7              	100.00%
                    	       		A3LQJ4              	10.91%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for A3LUU7 as seed ortholog is 100%.

Group of orthologs #1206. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

F6T2S3              	100.00%		A3LRC0              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for A3LRC0 as seed ortholog is 100%.

Group of orthologs #1207. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

F6TJS2              	100.00%		A3LSR7              	100.00%
Bootstrap support for F6TJS2 as seed ortholog is 100%.
Bootstrap support for A3LSR7 as seed ortholog is 100%.

Group of orthologs #1208. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

F6YXT8              	100.00%		A3GEV2              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for A3GEV2 as seed ortholog is 100%.

Group of orthologs #1209. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

F6TSS8              	100.00%		A3LWD7              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for A3LWD7 as seed ortholog is 100%.

Group of orthologs #1210. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

F7APY2              	100.00%		A3LRP1              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for A3LRP1 as seed ortholog is 100%.

Group of orthologs #1211. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

H2XPF4              	100.00%		A3GHG8              	100.00%
Bootstrap support for H2XPF4 as seed ortholog is 100%.
Bootstrap support for A3GHG8 as seed ortholog is 100%.

Group of orthologs #1212. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.stipitis:130

H2Y0Q6              	100.00%		A3GGU2              	100.00%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for A3GGU2 as seed ortholog is 100%.

Group of orthologs #1213. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:38

F6RS86              	100.00%		A3LZV9              	100.00%
F7ARF4              	100.00%		A3LRT5              	100.00%
H2XVE2              	100.00%		A3LS01              	100.00%
H2Y2K3              	45.42%		A3LSP0              	60.62%
H2Y0Z7              	43.66%		A3LR60              	58.45%
H2XPY7              	36.49%		
F6Z1A5              	18.40%		
F6RID1              	16.37%		
F6RBM9              	16.13%		
F6T5A7              	15.57%		
F6T010              	13.43%		
H2Y3F7              	12.75%		
F7BI82              	11.63%		
Bootstrap support for F6RS86 as seed ortholog is 82%.
Bootstrap support for F7ARF4 as seed ortholog is 79%.
Bootstrap support for H2XVE2 as seed ortholog is 72%.
Alternative seed ortholog is F6Z1X1 (45 bits away from this cluster)
Bootstrap support for A3LZV9 as seed ortholog is 77%.
Bootstrap support for A3LRT5 as seed ortholog is 74%.
Alternative seed ortholog is A3LP69 (38 bits away from this cluster)
Bootstrap support for A3LS01 as seed ortholog is 63%.
Alternative seed ortholog is A3LP69 (38 bits away from this cluster)

Group of orthologs #1214. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:129

H2XPZ6              	100.00%		A3LRY5              	100.00%
F6VTU7              	41.63%		A3LRY4              	36.55%
F6U0P5              	33.46%		
F6W9Y0              	28.54%		
F6W9J4              	12.11%		
Bootstrap support for H2XPZ6 as seed ortholog is 100%.
Bootstrap support for A3LRY5 as seed ortholog is 100%.

Group of orthologs #1215. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:129

F7AFI4              	100.00%		A3LYB1              	100.00%
F6YCJ4              	78.27%		
F6YGS0              	62.85%		
Bootstrap support for F7AFI4 as seed ortholog is 100%.
Bootstrap support for A3LYB1 as seed ortholog is 100%.

Group of orthologs #1216. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:129

F6QQ49              	100.00%		A3LTK3              	100.00%
Bootstrap support for F6QQ49 as seed ortholog is 100%.
Bootstrap support for A3LTK3 as seed ortholog is 100%.

Group of orthologs #1217. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:129

F6XL41              	100.00%		A3LNY4              	100.00%
Bootstrap support for F6XL41 as seed ortholog is 100%.
Bootstrap support for A3LNY4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:129

F7B012              	100.00%		A3GI69              	100.00%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for A3GI69 as seed ortholog is 100%.

Group of orthologs #1219. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:129

H2XME3              	100.00%		A3LQD8              	100.00%
Bootstrap support for H2XME3 as seed ortholog is 100%.
Bootstrap support for A3LQD8 as seed ortholog is 100%.

Group of orthologs #1220. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.stipitis:129

F6ZXH6              	100.00%		A3LYH2              	100.00%
Bootstrap support for F6ZXH6 as seed ortholog is 100%.
Bootstrap support for A3LYH2 as seed ortholog is 100%.

Group of orthologs #1221. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.stipitis:128

F6TBE2              	100.00%		A3LWT7              	100.00%
Bootstrap support for F6TBE2 as seed ortholog is 100%.
Bootstrap support for A3LWT7 as seed ortholog is 100%.

Group of orthologs #1222. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.stipitis:128

F6WNH2              	100.00%		A3LTS4              	100.00%
Bootstrap support for F6WNH2 as seed ortholog is 100%.
Bootstrap support for A3LTS4 as seed ortholog is 100%.

Group of orthologs #1223. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.stipitis:128

F6UK15              	100.00%		A3LYC6              	100.00%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for A3LYC6 as seed ortholog is 100%.

Group of orthologs #1224. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:127

F6TLU2              	100.00%		A3LZV3              	100.00%
F6TZG1              	34.44%		
H2XSF5              	17.89%		
Bootstrap support for F6TLU2 as seed ortholog is 77%.
Bootstrap support for A3LZV3 as seed ortholog is 100%.

Group of orthologs #1225. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.stipitis:127

F6X073              	100.00%		A3GGS4              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for A3GGS4 as seed ortholog is 100%.

Group of orthologs #1226. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.stipitis:127

F6ZS04              	100.00%		A3M0A9              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for A3M0A9 as seed ortholog is 100%.

Group of orthologs #1227. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 S.stipitis:126

F6W0H5              	100.00%		A3LT03              	100.00%
F6R6Q8              	27.45%		
F6UAX0              	25.49%		
H2XZX8              	24.59%		
L7N0R2              	24.59%		
Q1RLF1              	22.62%		
H2Y1C2              	20.06%		
H2XX05              	18.25%		
H2Y260              	16.89%		
H2XKK9              	14.18%		
F6TCA9              	13.12%		
Q1RL43              	12.97%		
Q1RL67              	12.07%		
F6RSE2              	11.76%		
F6WPJ4              	8.45%		
Q1RL62              	8.30%		
F6QEX4              	7.99%		
Q1RLE9              	7.54%		
Bootstrap support for F6W0H5 as seed ortholog is 85%.
Bootstrap support for A3LT03 as seed ortholog is 100%.

Group of orthologs #1228. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.stipitis:5

F6UGF1              	100.00%		A3GF51              	100.00%
F6YC60              	6.17%		
Bootstrap support for F6UGF1 as seed ortholog is 56%.
Alternative seed ortholog is F6WPV3 (7 bits away from this cluster)
Bootstrap support for A3GF51 as seed ortholog is 51%.
Alternative seed ortholog is A3LYQ9 (5 bits away from this cluster)

Group of orthologs #1229. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:126

F6Z9B3              	100.00%		A3LST6              	100.00%
F6W1X7              	20.98%		
Bootstrap support for F6Z9B3 as seed ortholog is 100%.
Bootstrap support for A3LST6 as seed ortholog is 100%.

Group of orthologs #1230. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:126

F6S1D4              	100.00%		A3LPA0              	100.00%
Bootstrap support for F6S1D4 as seed ortholog is 87%.
Bootstrap support for A3LPA0 as seed ortholog is 100%.

Group of orthologs #1231. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:126

F6SU13              	100.00%		A3LV31              	100.00%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for A3LV31 as seed ortholog is 100%.

Group of orthologs #1232. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:126

F6XRI7              	100.00%		A3LT86              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for A3LT86 as seed ortholog is 100%.

Group of orthologs #1233. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:70

F7A4L3              	100.00%		A3LSR5              	100.00%
Bootstrap support for F7A4L3 as seed ortholog is 100%.
Bootstrap support for A3LSR5 as seed ortholog is 98%.

Group of orthologs #1234. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:126

F6ZYA6              	100.00%		A3LX45              	100.00%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for A3LX45 as seed ortholog is 100%.

Group of orthologs #1235. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:126

F7B2X5              	100.00%		A3LVV6              	100.00%
Bootstrap support for F7B2X5 as seed ortholog is 100%.
Bootstrap support for A3LVV6 as seed ortholog is 100%.

Group of orthologs #1236. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:66

H2XWC1              	100.00%		A3LQ17              	100.00%
Bootstrap support for H2XWC1 as seed ortholog is 100%.
Bootstrap support for A3LQ17 as seed ortholog is 98%.

Group of orthologs #1237. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:69

H2Y233              	100.00%		A3GG27              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 99%.
Bootstrap support for A3GG27 as seed ortholog is 99%.

Group of orthologs #1238. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.stipitis:126

Q67EQ6              	100.00%		A3LMY2              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for A3LMY2 as seed ortholog is 100%.

Group of orthologs #1239. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.stipitis:125

H2Y1N7              	100.00%		A3LUW2              	100.00%
                    	       		A3GFQ6              	22.17%
Bootstrap support for H2Y1N7 as seed ortholog is 84%.
Bootstrap support for A3LUW2 as seed ortholog is 100%.

Group of orthologs #1240. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:125

A7BK23              	100.00%		A3LTF6              	100.00%
Bootstrap support for A7BK23 as seed ortholog is 100%.
Bootstrap support for A3LTF6 as seed ortholog is 100%.

Group of orthologs #1241. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:125

F6Q484              	100.00%		A3LZU1              	100.00%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for A3LZU1 as seed ortholog is 100%.

Group of orthologs #1242. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:125

F7BA39              	100.00%		A3LN86              	100.00%
Bootstrap support for F7BA39 as seed ortholog is 100%.
Bootstrap support for A3LN86 as seed ortholog is 100%.

Group of orthologs #1243. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.stipitis:76

F7A515              	100.00%		A3LYC3              	100.00%
Bootstrap support for F7A515 as seed ortholog is 69%.
Alternative seed ortholog is F6VHJ0 (14 bits away from this cluster)
Bootstrap support for A3LYC3 as seed ortholog is 99%.

Group of orthologs #1244. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:125

F7B4Q5              	100.00%		A3LWH8              	100.00%
Bootstrap support for F7B4Q5 as seed ortholog is 100%.
Bootstrap support for A3LWH8 as seed ortholog is 100%.

Group of orthologs #1245. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.stipitis:125

H2XSQ8              	100.00%		A3LS71              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for A3LS71 as seed ortholog is 100%.

Group of orthologs #1246. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:124

F6SVU6              	100.00%		A3LP62              	100.00%
L7N0U5              	62.76%		A3LVG6              	31.93%
H2XS65              	23.81%		
F6VTQ0              	23.20%		
F6ULA0              	23.20%		
F6Q966              	12.94%		
H2Y1F0              	12.70%		
H2XKG0              	12.58%		
F6PND8              	11.97%		
H2Y3K6              	9.04%		
Bootstrap support for F6SVU6 as seed ortholog is 100%.
Bootstrap support for A3LP62 as seed ortholog is 100%.

Group of orthologs #1247. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:22

F6VHI4              	100.00%		A3LTY1              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for A3LTY1 as seed ortholog is 75%.

Group of orthologs #1248. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:124

F7AI93              	100.00%		A3GGD4              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for A3GGD4 as seed ortholog is 100%.

Group of orthologs #1249. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:124

F6VSM2              	100.00%		A3M0H3              	100.00%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #1250. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:124

H2XKS6              	100.00%		A3GFL2              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for A3GFL2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:124

F6XJ18              	100.00%		A3LZC5              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for A3LZC5 as seed ortholog is 100%.

Group of orthologs #1252. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.stipitis:124

I6L2C8              	100.00%		A3GFN2              	100.00%
Bootstrap support for I6L2C8 as seed ortholog is 100%.
Bootstrap support for A3GFN2 as seed ortholog is 100%.

Group of orthologs #1253. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:123

F7AK04              	100.00%		A3GFZ8              	100.00%
F6RQ16              	25.03%		A3LVI6              	14.24%
Bootstrap support for F7AK04 as seed ortholog is 100%.
Bootstrap support for A3GFZ8 as seed ortholog is 100%.

Group of orthologs #1254. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.stipitis:2

H2XJL6              	100.00%		A3GF07              	100.00%
                    	       		A3GF05              	41.03%
                    	       		P50167              	6.28%
Bootstrap support for H2XJL6 as seed ortholog is 80%.
Bootstrap support for A3GF07 as seed ortholog is 65%.
Alternative seed ortholog is A3LZU7 (2 bits away from this cluster)

Group of orthologs #1255. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:123

F6QSH0              	100.00%		A3GH12              	100.00%
                    	       		A3GFA1              	19.85%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for A3GH12 as seed ortholog is 100%.

Group of orthologs #1256. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:123

F6YFR8              	100.00%		A3LVJ2              	100.00%
                    	       		A3LVG5              	10.86%
Bootstrap support for F6YFR8 as seed ortholog is 100%.
Bootstrap support for A3LVJ2 as seed ortholog is 100%.

Group of orthologs #1257. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:123

F6QHG7              	100.00%		A3LT80              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for A3LT80 as seed ortholog is 100%.

Group of orthologs #1258. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:81

F6Y8Y8              	100.00%		A3LPV2              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for A3LPV2 as seed ortholog is 99%.

Group of orthologs #1259. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:123

F7ASZ2              	100.00%		A3LMS0              	100.00%
Bootstrap support for F7ASZ2 as seed ortholog is 98%.
Bootstrap support for A3LMS0 as seed ortholog is 100%.

Group of orthologs #1260. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:28

H2XQJ8              	100.00%		A3LQW1              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for A3LQW1 as seed ortholog is 86%.

Group of orthologs #1261. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.stipitis:123

Q4H3E2              	100.00%		A3LRG3              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for A3LRG3 as seed ortholog is 100%.

Group of orthologs #1262. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.stipitis:29

F7B3V5              	100.00%		A3LTN1              	100.00%
H2XPJ1              	29.61%		
F6S5X9              	25.71%		
F6UVE4              	20.57%		
F6W7J8              	19.68%		
H2Y356              	5.14%		
Bootstrap support for F7B3V5 as seed ortholog is 100%.
Bootstrap support for A3LTN1 as seed ortholog is 81%.

Group of orthologs #1263. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.stipitis:122

F6S909              	100.00%		A3LPX2              	100.00%
F6S925              	41.34%		
Q4H398              	29.75%		
Q4H396              	23.70%		
Bootstrap support for F6S909 as seed ortholog is 76%.
Bootstrap support for A3LPX2 as seed ortholog is 100%.

Group of orthologs #1264. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.stipitis:122

F6XNK4              	100.00%		A3LNH4              	100.00%
Bootstrap support for F6XNK4 as seed ortholog is 100%.
Bootstrap support for A3LNH4 as seed ortholog is 100%.

Group of orthologs #1265. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.stipitis:122

F6V7G7              	100.00%		A3LVH2              	100.00%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for A3LVH2 as seed ortholog is 100%.

Group of orthologs #1266. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.stipitis:122

H2XU65              	100.00%		A3GFJ8              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for A3GFJ8 as seed ortholog is 100%.

Group of orthologs #1267. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.stipitis:121

F7BHG2              	100.00%		A3LN81              	100.00%
                    	       		A3LU83              	100.00%
Bootstrap support for F7BHG2 as seed ortholog is 75%.
Bootstrap support for A3LN81 as seed ortholog is 100%.
Bootstrap support for A3LU83 as seed ortholog is 100%.

Group of orthologs #1268. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.stipitis:121

F6RKR7              	100.00%		A3LNM6              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for A3LNM6 as seed ortholog is 100%.

Group of orthologs #1269. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.stipitis:121

F6ZE91              	100.00%		A3GFD6              	100.00%
Bootstrap support for F6ZE91 as seed ortholog is 100%.
Bootstrap support for A3GFD6 as seed ortholog is 100%.

Group of orthologs #1270. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.stipitis:59

F7AM61              	100.00%		A3LNP0              	100.00%
Bootstrap support for F7AM61 as seed ortholog is 100%.
Bootstrap support for A3LNP0 as seed ortholog is 94%.

Group of orthologs #1271. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 S.stipitis:20

H2XVE0              	100.00%		A3GFM4              	100.00%
Bootstrap support for H2XVE0 as seed ortholog is 72%.
Alternative seed ortholog is F6TYN3 (24 bits away from this cluster)
Bootstrap support for A3GFM4 as seed ortholog is 72%.
Alternative seed ortholog is A3LP12 (20 bits away from this cluster)

Group of orthologs #1272. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.stipitis:121

H2XTZ1              	100.00%		O13393              	100.00%
Bootstrap support for H2XTZ1 as seed ortholog is 87%.
Bootstrap support for O13393 as seed ortholog is 100%.

Group of orthologs #1273. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.stipitis:65

Q1RPU6              	100.00%		A3LW94              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for A3LW94 as seed ortholog is 99%.

Group of orthologs #1274. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.stipitis:120

F6SFQ0              	100.00%		A3GFU6              	100.00%
Bootstrap support for F6SFQ0 as seed ortholog is 100%.
Bootstrap support for A3GFU6 as seed ortholog is 100%.

Group of orthologs #1275. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.stipitis:120

F6T8R8              	100.00%		A3LTC9              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for A3LTC9 as seed ortholog is 100%.

Group of orthologs #1276. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.stipitis:120

F6Z3T2              	100.00%		A3GEW2              	100.00%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for A3GEW2 as seed ortholog is 100%.

Group of orthologs #1277. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 S.stipitis:34

F6XUY3              	100.00%		A3LNQ0              	100.00%
F6S855              	69.40%		A3LNP9              	52.04%
F6S880              	63.45%		
F6W3Q9              	42.92%		
F6UJQ6              	15.81%		
H2XY22              	15.20%		
F6U1Z9              	8.42%		
Bootstrap support for F6XUY3 as seed ortholog is 86%.
Bootstrap support for A3LNQ0 as seed ortholog is 80%.

Group of orthologs #1278. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6RRL3              	100.00%		A3GHH7              	100.00%
                    	       		A3LSH5              	28.74%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for A3GHH7 as seed ortholog is 100%.

Group of orthologs #1279. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6QBH7              	100.00%		A3LR42              	100.00%
F6TA22              	100.00%		
Bootstrap support for F6QBH7 as seed ortholog is 100%.
Bootstrap support for F6TA22 as seed ortholog is 100%.
Bootstrap support for A3LR42 as seed ortholog is 100%.

Group of orthologs #1280. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:63

F6QZ03              	100.00%		A3LQG0              	100.00%
                    	       		A3LP32              	5.33%
Bootstrap support for F6QZ03 as seed ortholog is 100%.
Bootstrap support for A3LQG0 as seed ortholog is 98%.

Group of orthologs #1281. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6RPW8              	100.00%		A3GG32              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for A3GG32 as seed ortholog is 100%.

Group of orthologs #1282. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.stipitis:119

F6QAT1              	100.00%		A3LV92              	100.00%
Bootstrap support for F6QAT1 as seed ortholog is 46%.
Alternative seed ortholog is F6SMZ6 (1 bits away from this cluster)
Bootstrap support for A3LV92 as seed ortholog is 100%.

Group of orthologs #1283. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6SDU1              	100.00%		A3LU02              	100.00%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for A3LU02 as seed ortholog is 100%.

Group of orthologs #1284. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6XTZ6              	100.00%		A3GHD3              	100.00%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for A3GHD3 as seed ortholog is 100%.

Group of orthologs #1285. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6RKZ8              	100.00%		A3M0I6              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for A3M0I6 as seed ortholog is 100%.

Group of orthologs #1286. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F7AD97              	100.00%		A3GIE0              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for A3GIE0 as seed ortholog is 100%.

Group of orthologs #1287. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6VFA0              	100.00%		A3LZR7              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for A3LZR7 as seed ortholog is 100%.

Group of orthologs #1288. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.stipitis:119

F6ZMJ7              	100.00%		A3LW50              	100.00%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for A3LW50 as seed ortholog is 100%.

Group of orthologs #1289. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 S.stipitis:30

F6WJT4              	100.00%		A3LVF0              	100.00%
F6ZST9              	9.50%		A3LWR1              	10.23%
                    	       		A3GHZ4              	8.08%
                    	       		A3LND2              	7.61%
Bootstrap support for F6WJT4 as seed ortholog is 80%.
Bootstrap support for A3LVF0 as seed ortholog is 75%.

Group of orthologs #1290. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F6RHG2              	100.00%		A3GFC3              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for A3GFC3 as seed ortholog is 100%.

Group of orthologs #1291. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F6R180              	100.00%		A3LMS7              	100.00%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for A3LMS7 as seed ortholog is 100%.

Group of orthologs #1292. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F6S3G5              	100.00%		A3LTY8              	100.00%
Bootstrap support for F6S3G5 as seed ortholog is 100%.
Bootstrap support for A3LTY8 as seed ortholog is 100%.

Group of orthologs #1293. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F6WRC9              	100.00%		A3GH29              	100.00%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for A3GH29 as seed ortholog is 100%.

Group of orthologs #1294. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F6QR08              	100.00%		A3M036              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for A3M036 as seed ortholog is 100%.

Group of orthologs #1295. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F6UUV5              	100.00%		A3LS90              	100.00%
Bootstrap support for F6UUV5 as seed ortholog is 100%.
Bootstrap support for A3LS90 as seed ortholog is 100%.

Group of orthologs #1296. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.stipitis:118

F7BB49              	100.00%		A3LWW0              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for A3LWW0 as seed ortholog is 100%.

Group of orthologs #1297. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:118

H2Y123              	100.00%		A3GHM5              	100.00%
Bootstrap support for H2Y123 as seed ortholog is 91%.
Bootstrap support for A3GHM5 as seed ortholog is 100%.

Group of orthologs #1298. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:60

F7A8I5              	100.00%		A3LYQ1              	100.00%
F7AR76              	82.82%		
F6TL65              	26.89%		
H2XRT7              	25.08%		
F6ZNW9              	24.63%		
F7B9K0              	24.29%		
F7BB38              	23.73%		
F6TL47              	22.82%		
H2Y2D9              	20.34%		
H2Y171              	20.11%		
F6PUR6              	18.42%		
L7N0S0              	18.42%		
F6PLM8              	18.31%		
H2XJM1              	18.31%		
H2XXR0              	18.31%		
F6ZI41              	18.08%		
F6ZC68              	17.97%		
H2XMC8              	17.74%		
F6QC31              	17.51%		
H2XVS1              	17.29%		
H2XKK3              	17.06%		
F6WRT4              	16.95%		
F6UFN6              	16.61%		
F6THU3              	16.27%		
F7A0M9              	15.71%		
H2Y3A4              	15.03%		
F6RLR6              	14.80%		
F6WNP2              	14.24%		
H2XW47              	12.88%		
F6TF08              	12.66%		
F6VYD7              	12.09%		
F6W8H6              	11.30%		
H2XSP5              	6.33%		
F6YVH4              	5.31%		
Bootstrap support for F7A8I5 as seed ortholog is 100%.
Bootstrap support for A3LYQ1 as seed ortholog is 90%.

Group of orthologs #1299. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:117

F6W0T2              	100.00%		A3LQG7              	100.00%
                    	       		A3LZA6              	6.85%
Bootstrap support for F6W0T2 as seed ortholog is 99%.
Bootstrap support for A3LQG7 as seed ortholog is 100%.

Group of orthologs #1300. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:117

F6VQB3              	100.00%		A3LWJ0              	100.00%
H2XML0              	51.85%		
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for A3LWJ0 as seed ortholog is 100%.

Group of orthologs #1301. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:117

F6PZM1              	100.00%		A3LNI0              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for A3LNI0 as seed ortholog is 100%.

Group of orthologs #1302. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:117

F6PXD8              	100.00%		A3LT64              	100.00%
Bootstrap support for F6PXD8 as seed ortholog is 100%.
Bootstrap support for A3LT64 as seed ortholog is 100%.

Group of orthologs #1303. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:117

F6T6Y7              	100.00%		A3LSC1              	100.00%
Bootstrap support for F6T6Y7 as seed ortholog is 99%.
Bootstrap support for A3LSC1 as seed ortholog is 100%.

Group of orthologs #1304. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:117

F7A9M5              	100.00%		A3LPE3              	100.00%
Bootstrap support for F7A9M5 as seed ortholog is 100%.
Bootstrap support for A3LPE3 as seed ortholog is 100%.

Group of orthologs #1305. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:117

F7BBN1              	100.00%		A3GI41              	100.00%
Bootstrap support for F7BBN1 as seed ortholog is 100%.
Bootstrap support for A3GI41 as seed ortholog is 100%.

Group of orthologs #1306. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.stipitis:117

F7BMN7              	100.00%		A3LVD5              	100.00%
Bootstrap support for F7BMN7 as seed ortholog is 100%.
Bootstrap support for A3LVD5 as seed ortholog is 100%.

Group of orthologs #1307. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.stipitis:117

H2XUW4              	100.00%		A3LRC8              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 72%.
Alternative seed ortholog is H2Y0Q2 (18 bits away from this cluster)
Bootstrap support for A3LRC8 as seed ortholog is 100%.

Group of orthologs #1308. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.stipitis:42

F6WRK0              	100.00%		A3LSR9              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for A3LSR9 as seed ortholog is 86%.

Group of orthologs #1309. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.stipitis:116

F6ZT62              	100.00%		A3LQK7              	100.00%
Bootstrap support for F6ZT62 as seed ortholog is 100%.
Bootstrap support for A3LQK7 as seed ortholog is 100%.

Group of orthologs #1310. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.stipitis:116

F7BNU5              	100.00%		A3LW92              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for A3LW92 as seed ortholog is 100%.

Group of orthologs #1311. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.stipitis:115

F6SGI6              	100.00%		A3LNN9              	100.00%
Bootstrap support for F6SGI6 as seed ortholog is 100%.
Bootstrap support for A3LNN9 as seed ortholog is 100%.

Group of orthologs #1312. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.stipitis:115

F6V4K8              	100.00%		A3LQL0              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for A3LQL0 as seed ortholog is 100%.

Group of orthologs #1313. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.stipitis:115

F6RT01              	100.00%		A3M053              	100.00%
Bootstrap support for F6RT01 as seed ortholog is 100%.
Bootstrap support for A3M053 as seed ortholog is 100%.

Group of orthologs #1314. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.stipitis:1

F7A912              	100.00%		A3LYP3              	100.00%
Bootstrap support for F7A912 as seed ortholog is 100%.
Bootstrap support for A3LYP3 as seed ortholog is 52%.
Alternative seed ortholog is A3LTL3 (1 bits away from this cluster)

Group of orthologs #1315. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.stipitis:115

H2XV68              	100.00%		A3LX71              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for A3LX71 as seed ortholog is 100%.

Group of orthologs #1316. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:64

F6YD53              	100.00%		A3LW44              	100.00%
                    	       		A3GH10              	70.27%
                    	       		A3GG78              	70.10%
                    	       		A3LU21              	68.41%
                    	       		A3GGR3              	64.36%
Bootstrap support for F6YD53 as seed ortholog is 95%.
Bootstrap support for A3LW44 as seed ortholog is 93%.

Group of orthologs #1317. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.stipitis:114

F6Q909              	100.00%		A3LP15              	100.00%
Bootstrap support for F6Q909 as seed ortholog is 63%.
Alternative seed ortholog is F6TSN4 (10 bits away from this cluster)
Bootstrap support for A3LP15 as seed ortholog is 100%.

Group of orthologs #1318. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.stipitis:70

F6UAX7              	100.00%		A3LNC9              	100.00%
Bootstrap support for F6UAX7 as seed ortholog is 100%.
Bootstrap support for A3LNC9 as seed ortholog is 98%.

Group of orthologs #1319. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:114

F6WSV9              	100.00%		A3LTQ1              	100.00%
Bootstrap support for F6WSV9 as seed ortholog is 91%.
Bootstrap support for A3LTQ1 as seed ortholog is 100%.

Group of orthologs #1320. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.stipitis:114

F6Z8S6              	100.00%		A3LSU0              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 92%.
Bootstrap support for A3LSU0 as seed ortholog is 100%.

Group of orthologs #1321. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:114

F7AKT1              	100.00%		A3LQC3              	100.00%
Bootstrap support for F7AKT1 as seed ortholog is 99%.
Bootstrap support for A3LQC3 as seed ortholog is 100%.

Group of orthologs #1322. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.stipitis:114

F7AI05              	100.00%		A3LWS1              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for A3LWS1 as seed ortholog is 100%.

Group of orthologs #1323. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:114

H2XR04              	100.00%		A3LNC6              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 99%.
Bootstrap support for A3LNC6 as seed ortholog is 100%.

Group of orthologs #1324. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.stipitis:114

H2XWG7              	100.00%		A3LQS6              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for A3LQS6 as seed ortholog is 100%.

Group of orthologs #1325. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.stipitis:113

F6TXH8              	100.00%		A3LV69              	100.00%
F6RY16              	26.73%		A3GGA9              	54.48%
F6ZT48              	23.27%		
F6WMS1              	19.42%		
F6WMR0              	11.92%		
Bootstrap support for F6TXH8 as seed ortholog is 94%.
Bootstrap support for A3LV69 as seed ortholog is 100%.

Group of orthologs #1326. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.stipitis:113

F6R107              	100.00%		A3GG90              	100.00%
F6Y7R5              	13.90%		A3LS39              	17.49%
Bootstrap support for F6R107 as seed ortholog is 51%.
Alternative seed ortholog is F6TJ37 (42 bits away from this cluster)
Bootstrap support for A3GG90 as seed ortholog is 100%.

Group of orthologs #1327. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:113

F6S8X6              	100.00%		A3LS82              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for A3LS82 as seed ortholog is 100%.

Group of orthologs #1328. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:113

F7ANQ7              	100.00%		A3LPA4              	100.00%
                    	       		A3LW67              	11.69%
Bootstrap support for F7ANQ7 as seed ortholog is 100%.
Bootstrap support for A3LPA4 as seed ortholog is 100%.

Group of orthologs #1329. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 S.stipitis:113

F6SU61              	100.00%		A3LQ56              	100.00%
Bootstrap support for F6SU61 as seed ortholog is 89%.
Bootstrap support for A3LQ56 as seed ortholog is 100%.

Group of orthologs #1330. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:113

F6VQX3              	100.00%		A3LZL6              	100.00%
Bootstrap support for F6VQX3 as seed ortholog is 100%.
Bootstrap support for A3LZL6 as seed ortholog is 100%.

Group of orthologs #1331. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:55

H2XNY0              	100.00%		A3LTG0              	100.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for A3LTG0 as seed ortholog is 99%.

Group of orthologs #1332. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:113

H2XZN8              	100.00%		A3GHF5              	100.00%
Bootstrap support for H2XZN8 as seed ortholog is 91%.
Bootstrap support for A3GHF5 as seed ortholog is 100%.

Group of orthologs #1333. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:113

H2Y1V2              	100.00%		A3LTT8              	100.00%
Bootstrap support for H2Y1V2 as seed ortholog is 100%.
Bootstrap support for A3LTT8 as seed ortholog is 100%.

Group of orthologs #1334. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.stipitis:113

H2Y240              	100.00%		A3LUD2              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for A3LUD2 as seed ortholog is 100%.

Group of orthologs #1335. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 S.stipitis:42

F6RPI4              	100.00%		A3GGB2              	100.00%
F6PUC9              	100.00%		A3GGB1              	100.00%
F6RPK0              	66.32%		
F6PTH0              	65.03%		
F6PTW3              	59.10%		
F6U472              	7.51%		
Bootstrap support for F6RPI4 as seed ortholog is 76%.
Bootstrap support for F6PUC9 as seed ortholog is 74%.
Alternative seed ortholog is F7B9X1 (24 bits away from this cluster)
Bootstrap support for A3GGB2 as seed ortholog is 90%.
Bootstrap support for A3GGB1 as seed ortholog is 73%.
Alternative seed ortholog is A3GHL5 (42 bits away from this cluster)

Group of orthologs #1336. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.stipitis:112

F6X0R0              	100.00%		A3GF33              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 96%.
Bootstrap support for A3GF33 as seed ortholog is 100%.

Group of orthologs #1337. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:112

F6XZL0              	100.00%		A3GFR4              	100.00%
Bootstrap support for F6XZL0 as seed ortholog is 100%.
Bootstrap support for A3GFR4 as seed ortholog is 100%.

Group of orthologs #1338. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:112

F6WG20              	100.00%		A3LYI2              	100.00%
Bootstrap support for F6WG20 as seed ortholog is 100%.
Bootstrap support for A3LYI2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 S.stipitis:112

F7AZY9              	100.00%		A3LP30              	100.00%
Bootstrap support for F7AZY9 as seed ortholog is 86%.
Bootstrap support for A3LP30 as seed ortholog is 100%.

Group of orthologs #1340. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:112

F6ZGT8              	100.00%		A3LX04              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for A3LX04 as seed ortholog is 100%.

Group of orthologs #1341. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:112

H2XKF1              	100.00%		A3LRT4              	100.00%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for A3LRT4 as seed ortholog is 100%.

Group of orthologs #1342. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.stipitis:112

H2XK82              	100.00%		A3LSL3              	100.00%
Bootstrap support for H2XK82 as seed ortholog is 88%.
Bootstrap support for A3LSL3 as seed ortholog is 100%.

Group of orthologs #1343. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.stipitis:112

H2XLK9              	100.00%		A3LWB7              	100.00%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for A3LWB7 as seed ortholog is 100%.

Group of orthologs #1344. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.stipitis:10

F6QAL4              	100.00%		A3LTU5              	100.00%
F6QAM3              	89.01%		
F6X1X1              	46.97%		
F6X593              	21.66%		
F6SL89              	17.99%		
H2XX96              	16.56%		
Bootstrap support for F6QAL4 as seed ortholog is 100%.
Bootstrap support for A3LTU5 as seed ortholog is 39%.
Alternative seed ortholog is A3LTK6 (10 bits away from this cluster)

Group of orthologs #1345. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.stipitis:111

F6PPP3              	100.00%		A3LXN3              	100.00%
Bootstrap support for F6PPP3 as seed ortholog is 100%.
Bootstrap support for A3LXN3 as seed ortholog is 100%.

Group of orthologs #1346. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 S.stipitis:111

F6W4G9              	100.00%		A3GHN7              	100.00%
Bootstrap support for F6W4G9 as seed ortholog is 88%.
Bootstrap support for A3GHN7 as seed ortholog is 100%.

Group of orthologs #1347. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:9

H2XLZ2              	100.00%		A3GHV4              	100.00%
Bootstrap support for H2XLZ2 as seed ortholog is 99%.
Bootstrap support for A3GHV4 as seed ortholog is 66%.
Alternative seed ortholog is A3LPE9 (9 bits away from this cluster)

Group of orthologs #1348. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.stipitis:111

H2XSG4              	100.00%		A3LQ39              	100.00%
Bootstrap support for H2XSG4 as seed ortholog is 100%.
Bootstrap support for A3LQ39 as seed ortholog is 100%.

Group of orthologs #1349. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.stipitis:111

H2XSZ1              	100.00%		A3M080              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for A3M080 as seed ortholog is 100%.

Group of orthologs #1350. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.stipitis:110

F6U1Q3              	100.00%		A3LSM9              	100.00%
                    	       		A3LSM8              	10.81%
Bootstrap support for F6U1Q3 as seed ortholog is 91%.
Bootstrap support for A3LSM9 as seed ortholog is 100%.

Group of orthologs #1351. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.stipitis:110

F6QEH8              	100.00%		A3LYM6              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for A3LYM6 as seed ortholog is 100%.

Group of orthologs #1352. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.stipitis:110

F6VKK3              	100.00%		A3LN98              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for A3LN98 as seed ortholog is 100%.

Group of orthologs #1353. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 S.stipitis:13

F6REQ0              	100.00%		A3LS16              	100.00%
                    	       		A3LWD6              	20.58%
                    	       		A3LWD5              	20.27%
                    	       		A3GFF7              	18.42%
Bootstrap support for F6REQ0 as seed ortholog is 53%.
Alternative seed ortholog is H2Y212 (24 bits away from this cluster)
Bootstrap support for A3LS16 as seed ortholog is 65%.
Alternative seed ortholog is A3LR52 (13 bits away from this cluster)

Group of orthologs #1354. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:59

F6XKZ6              	100.00%		A3LWA4              	100.00%
                    	       		A3LU11              	16.02%
                    	       		A3LUU0              	9.07%
Bootstrap support for F6XKZ6 as seed ortholog is 100%.
Bootstrap support for A3LWA4 as seed ortholog is 89%.

Group of orthologs #1355. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

H2Y3F1              	100.00%		A3LZU9              	100.00%
                    	       		A3LQR8              	29.14%
                    	       		A3LSD2              	26.95%
Bootstrap support for H2Y3F1 as seed ortholog is 100%.
Bootstrap support for A3LZU9 as seed ortholog is 100%.

Group of orthologs #1356. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6XFA8              	100.00%		A3LQU0              	100.00%
F6SFI7              	7.18%		
Bootstrap support for F6XFA8 as seed ortholog is 100%.
Bootstrap support for A3LQU0 as seed ortholog is 100%.

Group of orthologs #1357. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6WPK3              	100.00%		A3LZY3              	100.00%
                    	       		A3LWB2              	16.21%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for A3LZY3 as seed ortholog is 100%.

Group of orthologs #1358. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6QPH0              	100.00%		A3LY19              	100.00%
Bootstrap support for F6QPH0 as seed ortholog is 100%.
Bootstrap support for A3LY19 as seed ortholog is 100%.

Group of orthologs #1359. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6WHI9              	100.00%		A3LNQ2              	100.00%
Bootstrap support for F6WHI9 as seed ortholog is 100%.
Bootstrap support for A3LNQ2 as seed ortholog is 100%.

Group of orthologs #1360. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6UWK1              	100.00%		A3LUG3              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for A3LUG3 as seed ortholog is 100%.

Group of orthologs #1361. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6ZP02              	100.00%		A3GFM9              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for A3GFM9 as seed ortholog is 100%.

Group of orthologs #1362. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6W9C9              	100.00%		A3LXR0              	100.00%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for A3LXR0 as seed ortholog is 100%.

Group of orthologs #1363. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

F6ZGD4              	100.00%		A3LXP9              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for A3LXP9 as seed ortholog is 100%.

Group of orthologs #1364. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

H2XWT1              	100.00%		A3GFA6              	100.00%
Bootstrap support for H2XWT1 as seed ortholog is 100%.
Bootstrap support for A3GFA6 as seed ortholog is 100%.

Group of orthologs #1365. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.stipitis:109

H2XSI3              	100.00%		A3LNU6              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 78%.
Bootstrap support for A3LNU6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

H2XYG3              	100.00%		A3LP06              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for A3LP06 as seed ortholog is 100%.

Group of orthologs #1367. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.stipitis:109

H2XZV1              	100.00%		A3LTI1              	100.00%
Bootstrap support for H2XZV1 as seed ortholog is 100%.
Bootstrap support for A3LTI1 as seed ortholog is 100%.

Group of orthologs #1368. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:29

F7BH23              	100.00%		A3LTX1              	100.00%
F6SJR0              	22.66%		
F6ZB26              	13.90%		
Bootstrap support for F7BH23 as seed ortholog is 100%.
Bootstrap support for A3LTX1 as seed ortholog is 81%.

Group of orthologs #1369. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6TXQ6              	100.00%		A3LRL1              	100.00%
F6V198              	32.64%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for A3LRL1 as seed ortholog is 100%.

Group of orthologs #1370. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:60

F6QXC2              	100.00%		A3LUZ9              	100.00%
Bootstrap support for F6QXC2 as seed ortholog is 100%.
Bootstrap support for A3LUZ9 as seed ortholog is 89%.

Group of orthologs #1371. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6U8F3              	100.00%		A3LQK8              	100.00%
Bootstrap support for F6U8F3 as seed ortholog is 100%.
Bootstrap support for A3LQK8 as seed ortholog is 100%.

Group of orthologs #1372. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6W2W3              	100.00%		A3LN18              	100.00%
Bootstrap support for F6W2W3 as seed ortholog is 100%.
Bootstrap support for A3LN18 as seed ortholog is 100%.

Group of orthologs #1373. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6SDM6              	100.00%		A3LXL5              	100.00%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for A3LXL5 as seed ortholog is 100%.

Group of orthologs #1374. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6YLW1              	100.00%		A3GHB5              	100.00%
Bootstrap support for F6YLW1 as seed ortholog is 100%.
Bootstrap support for A3GHB5 as seed ortholog is 100%.

Group of orthologs #1375. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.stipitis:26

F6XG93              	100.00%		A3LT13              	100.00%
Bootstrap support for F6XG93 as seed ortholog is 89%.
Bootstrap support for A3LT13 as seed ortholog is 53%.
Alternative seed ortholog is A3LP42 (26 bits away from this cluster)

Group of orthologs #1376. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6VN74              	100.00%		A3M0E2              	100.00%
Bootstrap support for F6VN74 as seed ortholog is 100%.
Bootstrap support for A3M0E2 as seed ortholog is 100%.

Group of orthologs #1377. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F6YZ79              	100.00%		A3LUI4              	100.00%
Bootstrap support for F6YZ79 as seed ortholog is 100%.
Bootstrap support for A3LUI4 as seed ortholog is 100%.

Group of orthologs #1378. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.stipitis:108

F7AEK6              	100.00%		A3LYP0              	100.00%
Bootstrap support for F7AEK6 as seed ortholog is 100%.
Bootstrap support for A3LYP0 as seed ortholog is 100%.

Group of orthologs #1379. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:107

F6WK69              	100.00%		A3GIA4              	100.00%
Bootstrap support for F6WK69 as seed ortholog is 100%.
Bootstrap support for A3GIA4 as seed ortholog is 100%.

Group of orthologs #1380. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:107

F6X915              	100.00%		A3LTV7              	100.00%
Bootstrap support for F6X915 as seed ortholog is 100%.
Bootstrap support for A3LTV7 as seed ortholog is 100%.

Group of orthologs #1381. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.stipitis:107

F6X134              	100.00%		A3LXP1              	100.00%
Bootstrap support for F6X134 as seed ortholog is 82%.
Bootstrap support for A3LXP1 as seed ortholog is 100%.

Group of orthologs #1382. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:107

F7B383              	100.00%		A3LV45              	100.00%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for A3LV45 as seed ortholog is 100%.

Group of orthologs #1383. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.stipitis:107

Q4H2R5              	100.00%		A3LNS8              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for A3LNS8 as seed ortholog is 100%.

Group of orthologs #1384. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.stipitis:106

F6SRF9              	100.00%		A3LNG9              	100.00%
F6RKY2              	6.50%		
Bootstrap support for F6SRF9 as seed ortholog is 100%.
Bootstrap support for A3LNG9 as seed ortholog is 100%.

Group of orthologs #1385. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.stipitis:106

F6UNM5              	100.00%		A3LRG0              	100.00%
Bootstrap support for F6UNM5 as seed ortholog is 35%.
Alternative seed ortholog is H2XP13 (11 bits away from this cluster)
Bootstrap support for A3LRG0 as seed ortholog is 100%.

Group of orthologs #1386. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.stipitis:106

F6UCW1              	100.00%		A3LSW2              	100.00%
Bootstrap support for F6UCW1 as seed ortholog is 100%.
Bootstrap support for A3LSW2 as seed ortholog is 100%.

Group of orthologs #1387. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.stipitis:106

F6SSP8              	100.00%		A3M0C7              	100.00%
Bootstrap support for F6SSP8 as seed ortholog is 100%.
Bootstrap support for A3M0C7 as seed ortholog is 100%.

Group of orthologs #1388. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.stipitis:61

F7AH68              	100.00%		A3LYJ5              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 96%.
Bootstrap support for A3LYJ5 as seed ortholog is 97%.

Group of orthologs #1389. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.stipitis:106

H2XNC6              	100.00%		A3LUA1              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for A3LUA1 as seed ortholog is 100%.

Group of orthologs #1390. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.stipitis:106

H2XNK3              	100.00%		A3M0A2              	100.00%
Bootstrap support for H2XNK3 as seed ortholog is 100%.
Bootstrap support for A3M0A2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:54

F6YF45              	100.00%		A3LPF4              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 99%.
Bootstrap support for A3LPF4 as seed ortholog is 99%.

Group of orthologs #1392. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.stipitis:105

F6XR53              	100.00%		A3LXS7              	100.00%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for A3LXS7 as seed ortholog is 100%.

Group of orthologs #1393. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.stipitis:105

Q1RPW1              	100.00%		A3GHM6              	100.00%
Bootstrap support for Q1RPW1 as seed ortholog is 100%.
Bootstrap support for A3GHM6 as seed ortholog is 100%.

Group of orthologs #1394. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.stipitis:63

H2XY81              	100.00%		A3LVG0              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for A3LVG0 as seed ortholog is 99%.

Group of orthologs #1395. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.stipitis:50

F6RRD5              	100.00%		A3LPW8              	100.00%
Bootstrap support for F6RRD5 as seed ortholog is 100%.
Bootstrap support for A3LPW8 as seed ortholog is 86%.

Group of orthologs #1396. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.stipitis:104

F6R6C4              	100.00%		A3LVL6              	100.00%
Bootstrap support for F6R6C4 as seed ortholog is 100%.
Bootstrap support for A3LVL6 as seed ortholog is 100%.

Group of orthologs #1397. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.stipitis:104

F6VPU4              	100.00%		A3LRB3              	100.00%
Bootstrap support for F6VPU4 as seed ortholog is 100%.
Bootstrap support for A3LRB3 as seed ortholog is 100%.

Group of orthologs #1398. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.stipitis:104

F6Y4F7              	100.00%		A3LR30              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for A3LR30 as seed ortholog is 100%.

Group of orthologs #1399. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:104

Q2PEE1              	100.00%		A3LN47              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 99%.
Bootstrap support for A3LN47 as seed ortholog is 100%.

Group of orthologs #1400. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.stipitis:104

H2XYP9              	100.00%		A3LVQ6              	100.00%
Bootstrap support for H2XYP9 as seed ortholog is 68%.
Alternative seed ortholog is F6ZJ76 (22 bits away from this cluster)
Bootstrap support for A3LVQ6 as seed ortholog is 100%.

Group of orthologs #1401. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

F6W0S4              	100.00%		A3GGW1              	100.00%
H2Y2I8              	13.08%		A3M0C8              	6.05%
Bootstrap support for F6W0S4 as seed ortholog is 100%.
Bootstrap support for A3GGW1 as seed ortholog is 100%.

Group of orthologs #1402. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

F6YAZ4              	100.00%		A3LXE6              	100.00%
                    	       		A3LZZ1              	100.00%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for A3LXE6 as seed ortholog is 100%.
Bootstrap support for A3LZZ1 as seed ortholog is 100%.

Group of orthologs #1403. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

F6ZUQ2              	100.00%		A3M043              	100.00%
F6ZNK2              	10.87%		
Bootstrap support for F6ZUQ2 as seed ortholog is 100%.
Bootstrap support for A3M043 as seed ortholog is 100%.

Group of orthologs #1404. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:14

F6QC45              	100.00%		A3LZ00              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 95%.
Bootstrap support for A3LZ00 as seed ortholog is 68%.
Alternative seed ortholog is A3GGQ3 (14 bits away from this cluster)

Group of orthologs #1405. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

F6VPC4              	100.00%		A3LPW7              	100.00%
Bootstrap support for F6VPC4 as seed ortholog is 100%.
Bootstrap support for A3LPW7 as seed ortholog is 100%.

Group of orthologs #1406. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.stipitis:103

F6TIT1              	100.00%		A3LZI3              	100.00%
Bootstrap support for F6TIT1 as seed ortholog is 60%.
Alternative seed ortholog is H2XL14 (7 bits away from this cluster)
Bootstrap support for A3LZI3 as seed ortholog is 100%.

Group of orthologs #1407. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

F6ZA03              	100.00%		A3LTN9              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for A3LTN9 as seed ortholog is 100%.

Group of orthologs #1408. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.stipitis:103

F6Y043              	100.00%		A3LY40              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 68%.
Alternative seed ortholog is H2XV81 (19 bits away from this cluster)
Bootstrap support for A3LY40 as seed ortholog is 100%.

Group of orthologs #1409. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

H2XRY8              	100.00%		A3LT47              	100.00%
Bootstrap support for H2XRY8 as seed ortholog is 100%.
Bootstrap support for A3LT47 as seed ortholog is 100%.

Group of orthologs #1410. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.stipitis:103

H2XZI3              	100.00%		A3LXV2              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for A3LXV2 as seed ortholog is 100%.

Group of orthologs #1411. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

F6WEC1              	100.00%		A3GI81              	100.00%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for A3GI81 as seed ortholog is 100%.

Group of orthologs #1412. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

F6RGQ1              	100.00%		A3LYD7              	100.00%
Bootstrap support for F6RGQ1 as seed ortholog is 100%.
Bootstrap support for A3LYD7 as seed ortholog is 100%.

Group of orthologs #1413. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

F6VXS0              	100.00%		A3LT60              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for A3LT60 as seed ortholog is 100%.

Group of orthologs #1414. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

F6YF30              	100.00%		A3LNK5              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for A3LNK5 as seed ortholog is 100%.

Group of orthologs #1415. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

F7B9T1              	100.00%		A3LZT7              	100.00%
Bootstrap support for F7B9T1 as seed ortholog is 100%.
Bootstrap support for A3LZT7 as seed ortholog is 100%.

Group of orthologs #1416. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

H2Y1H3              	100.00%		A3LNQ9              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for A3LNQ9 as seed ortholog is 100%.

Group of orthologs #1417. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.stipitis:102

H2Y3J4              	100.00%		A3M0C9              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for A3M0C9 as seed ortholog is 100%.

Group of orthologs #1418. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:101

F6Q4Z2              	100.00%		A3LY75              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for A3LY75 as seed ortholog is 100%.

Group of orthologs #1419. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:101

F6ZQH5              	100.00%		A3LQA9              	100.00%
Bootstrap support for F6ZQH5 as seed ortholog is 100%.
Bootstrap support for A3LQA9 as seed ortholog is 100%.

Group of orthologs #1420. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:101

F7BD35              	100.00%		A3GHF6              	100.00%
Bootstrap support for F7BD35 as seed ortholog is 100%.
Bootstrap support for A3GHF6 as seed ortholog is 100%.

Group of orthologs #1421. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:101

F6ZF76              	100.00%		A3LUD8              	100.00%
Bootstrap support for F6ZF76 as seed ortholog is 100%.
Bootstrap support for A3LUD8 as seed ortholog is 100%.

Group of orthologs #1422. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:101

F7B3X8              	100.00%		A3LPX1              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for A3LPX1 as seed ortholog is 100%.

Group of orthologs #1423. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.stipitis:101

H2XPR5              	100.00%		A3LVT7              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for A3LVT7 as seed ortholog is 100%.

Group of orthologs #1424. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.stipitis:18

F6YZ62              	100.00%		O13309              	100.00%
F6UEA0              	29.64%		O00097              	81.74%
F6Z103              	20.21%		A3LV78              	6.37%
Bootstrap support for F6YZ62 as seed ortholog is 59%.
Alternative seed ortholog is F6TKR9 (19 bits away from this cluster)
Bootstrap support for O13309 as seed ortholog is 66%.
Alternative seed ortholog is A3LUA4 (18 bits away from this cluster)

Group of orthologs #1425. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:100

F6RJQ4              	100.00%		A3LTK9              	100.00%
                    	       		A3LRE1              	9.47%
                    	       		A3LZE6              	6.17%
Bootstrap support for F6RJQ4 as seed ortholog is 100%.
Bootstrap support for A3LTK9 as seed ortholog is 100%.

Group of orthologs #1426. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 S.stipitis:28

F7BGH4              	100.00%		A3GFG2              	100.00%
F6PLW6              	17.13%		A3LUB3              	38.24%
Bootstrap support for F7BGH4 as seed ortholog is 64%.
Alternative seed ortholog is F6VKL9 (16 bits away from this cluster)
Bootstrap support for A3GFG2 as seed ortholog is 64%.
Alternative seed ortholog is A3LNL9 (28 bits away from this cluster)

Group of orthologs #1427. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:100

F6U5E5              	100.00%		A3LU86              	100.00%
Bootstrap support for F6U5E5 as seed ortholog is 100%.
Bootstrap support for A3LU86 as seed ortholog is 100%.

Group of orthologs #1428. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:100

F6W1S6              	100.00%		A3LQ60              	100.00%
Bootstrap support for F6W1S6 as seed ortholog is 100%.
Bootstrap support for A3LQ60 as seed ortholog is 100%.

Group of orthologs #1429. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:100

H2XLC7              	100.00%		A3LT54              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for A3LT54 as seed ortholog is 100%.

Group of orthologs #1430. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:100

H2XKA1              	100.00%		A3LUU2              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for A3LUU2 as seed ortholog is 100%.

Group of orthologs #1431. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.stipitis:100

H2XWE7              	100.00%		A3LT51              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for A3LT51 as seed ortholog is 100%.

Group of orthologs #1432. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:99

L7N0R6              	100.00%		A3GF19              	100.00%
F6W833              	83.33%		
H2Y1N3              	61.35%		
F6XCJ9              	58.49%		
F6W7L1              	57.98%		
F6V5T4              	45.81%		
F6VSX4              	44.99%		
Bootstrap support for L7N0R6 as seed ortholog is 100%.
Bootstrap support for A3GF19 as seed ortholog is 100%.

Group of orthologs #1433. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:99

F6Q521              	100.00%		A3LTT9              	100.00%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for A3LTT9 as seed ortholog is 100%.

Group of orthologs #1434. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:99

F6VA08              	100.00%		A3LPR7              	100.00%
Bootstrap support for F6VA08 as seed ortholog is 100%.
Bootstrap support for A3LPR7 as seed ortholog is 100%.

Group of orthologs #1435. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.stipitis:99

F6Y3J4              	100.00%		A3LQY2              	100.00%
Bootstrap support for F6Y3J4 as seed ortholog is 31%.
Alternative seed ortholog is F7AXY8 (14 bits away from this cluster)
Bootstrap support for A3LQY2 as seed ortholog is 100%.

Group of orthologs #1436. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 S.stipitis:99

F6Z6E4              	100.00%		A3LNU7              	100.00%
Bootstrap support for F6Z6E4 as seed ortholog is 93%.
Bootstrap support for A3LNU7 as seed ortholog is 100%.

Group of orthologs #1437. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:99

H2XLA2              	100.00%		A3GFM7              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for A3GFM7 as seed ortholog is 100%.

Group of orthologs #1438. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.stipitis:99

F7A5A0              	100.00%		A3LVP3              	100.00%
Bootstrap support for F7A5A0 as seed ortholog is 100%.
Bootstrap support for A3LVP3 as seed ortholog is 100%.

Group of orthologs #1439. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.stipitis:98

F6YMZ5              	100.00%		A3LWA3              	100.00%
                    	       		A3LQP4              	90.91%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for A3LWA3 as seed ortholog is 100%.

Group of orthologs #1440. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.stipitis:98

F6Z010              	100.00%		A3LXL2              	100.00%
                    	       		A3LYI3              	13.63%
Bootstrap support for F6Z010 as seed ortholog is 74%.
Alternative seed ortholog is F6QAK1 (29 bits away from this cluster)
Bootstrap support for A3LXL2 as seed ortholog is 100%.

Group of orthologs #1441. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.stipitis:98

F6QSC7              	100.00%		A3LQI3              	100.00%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for A3LQI3 as seed ortholog is 100%.

Group of orthologs #1442. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.stipitis:98

F7B7K2              	100.00%		A3LRS0              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for A3LRS0 as seed ortholog is 100%.

Group of orthologs #1443. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.stipitis:98

F7BI62              	100.00%		A3M0A6              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for A3M0A6 as seed ortholog is 100%.

Group of orthologs #1444. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.stipitis:97

F7A4D7              	100.00%		A3M0M6              	100.00%
F6VBN4              	29.38%		A3LW09              	15.97%
H2XKS7              	25.03%		
Bootstrap support for F7A4D7 as seed ortholog is 67%.
Alternative seed ortholog is F6ZFE0 (41 bits away from this cluster)
Bootstrap support for A3M0M6 as seed ortholog is 100%.

Group of orthologs #1445. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

F6V1C0              	100.00%		A3GGS2              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for A3GGS2 as seed ortholog is 100%.

Group of orthologs #1446. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

F6YU96              	100.00%		A3GF34              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for A3GF34 as seed ortholog is 100%.

Group of orthologs #1447. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

F6XC87              	100.00%		A3LQC9              	100.00%
Bootstrap support for F6XC87 as seed ortholog is 100%.
Bootstrap support for A3LQC9 as seed ortholog is 100%.

Group of orthologs #1448. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

F7AD34              	100.00%		A3GGF4              	100.00%
Bootstrap support for F7AD34 as seed ortholog is 100%.
Bootstrap support for A3GGF4 as seed ortholog is 100%.

Group of orthologs #1449. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

F6YUN5              	100.00%		A3LVW6              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for A3LVW6 as seed ortholog is 100%.

Group of orthologs #1450. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

F7BME9              	100.00%		A3LQ09              	100.00%
Bootstrap support for F7BME9 as seed ortholog is 100%.
Bootstrap support for A3LQ09 as seed ortholog is 100%.

Group of orthologs #1451. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.stipitis:97

H2XY20              	100.00%		A3GI53              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #1452. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

F6PHE6              	100.00%		A3LPL9              	100.00%
Bootstrap support for F6PHE6 as seed ortholog is 100%.
Bootstrap support for A3LPL9 as seed ortholog is 100%.

Group of orthologs #1453. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.stipitis:96

F6QXX8              	100.00%		A3GHC6              	100.00%
Bootstrap support for F6QXX8 as seed ortholog is 87%.
Bootstrap support for A3GHC6 as seed ortholog is 100%.

Group of orthologs #1454. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

F6QTI2              	100.00%		A3LXP5              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for A3LXP5 as seed ortholog is 100%.

Group of orthologs #1455. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

F6XR12              	100.00%		A3GH24              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for A3GH24 as seed ortholog is 100%.

Group of orthologs #1456. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

F6WJV4              	100.00%		A3LT87              	100.00%
Bootstrap support for F6WJV4 as seed ortholog is 100%.
Bootstrap support for A3LT87 as seed ortholog is 100%.

Group of orthologs #1457. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

H2XUU8              	100.00%		A3LSV7              	100.00%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for A3LSV7 as seed ortholog is 100%.

Group of orthologs #1458. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

H2XVM5              	100.00%		A3LSE8              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 100%.
Bootstrap support for A3LSE8 as seed ortholog is 100%.

Group of orthologs #1459. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.stipitis:96

Q4H3U1              	100.00%		A3GHR2              	100.00%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for A3GHR2 as seed ortholog is 100%.

Group of orthologs #1460. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

F6QMA7              	100.00%		A3LYW4              	100.00%
H2XPQ4              	30.77%		
Bootstrap support for F6QMA7 as seed ortholog is 100%.
Bootstrap support for A3LYW4 as seed ortholog is 100%.

Group of orthologs #1461. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

H2XNW6              	100.00%		A3LSL9              	100.00%
H2XLB1              	36.74%		
Bootstrap support for H2XNW6 as seed ortholog is 100%.
Bootstrap support for A3LSL9 as seed ortholog is 100%.

Group of orthologs #1462. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

F6R2C6              	100.00%		A3LVB9              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for A3LVB9 as seed ortholog is 100%.

Group of orthologs #1463. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

F6VPT6              	100.00%		A3LNL5              	100.00%
Bootstrap support for F6VPT6 as seed ortholog is 100%.
Bootstrap support for A3LNL5 as seed ortholog is 100%.

Group of orthologs #1464. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

F6X9U7              	100.00%		A3LQS4              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for A3LQS4 as seed ortholog is 100%.

Group of orthologs #1465. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

F6V766              	100.00%		A3LW91              	100.00%
Bootstrap support for F6V766 as seed ortholog is 100%.
Bootstrap support for A3LW91 as seed ortholog is 100%.

Group of orthologs #1466. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

H2XJN8              	100.00%		A3GGS7              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #1467. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

F6WUF6              	100.00%		A3LZL8              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for A3LZL8 as seed ortholog is 100%.

Group of orthologs #1468. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.stipitis:95

H2XPL3              	100.00%		A3GGK5              	100.00%
Bootstrap support for H2XPL3 as seed ortholog is 100%.
Bootstrap support for A3GGK5 as seed ortholog is 100%.

Group of orthologs #1469. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

F6XYT3              	100.00%		A3LNX9              	100.00%
F7A6E1              	100.00%		A3GFQ1              	100.00%
F6XYD9              	100.00%		A3GF84              	100.00%
H2Y1L4              	100.00%		A3LS65              	100.00%
F6YP51              	49.50%		A3LVM7              	100.00%
F7AQC2              	38.10%		A3LUX3              	77.92%
                    	       		A3LZA0              	52.30%
                    	       		A3LWY1              	49.17%
                    	       		A3LVE5              	47.22%
                    	       		A3GHU4              	44.85%
                    	       		A3LNV7              	41.82%
                    	       		A3LUT5              	40.60%
                    	       		A3GGY0              	35.25%
                    	       		A3GGS5              	28.45%
                    	       		A3LRB7              	25.36%
                    	       		A3LQF6              	24.56%
                    	       		A3GFL8              	23.34%
                    	       		A3LPC8              	21.97%
                    	       		A3M039              	21.70%
                    	       		A3GG77              	21.60%
                    	       		A3LSN9              	19.19%
                    	       		A3LRB6              	18.79%
                    	       		A3GET0              	18.71%
                    	       		A3LUI5              	16.59%
Bootstrap support for F6XYT3 as seed ortholog is 100%.
Bootstrap support for F7A6E1 as seed ortholog is 100%.
Bootstrap support for F6XYD9 as seed ortholog is 100%.
Bootstrap support for H2Y1L4 as seed ortholog is 100%.
Bootstrap support for A3LNX9 as seed ortholog is 100%.
Bootstrap support for A3GFQ1 as seed ortholog is 100%.
Bootstrap support for A3GF84 as seed ortholog is 100%.
Bootstrap support for A3LS65 as seed ortholog is 100%.
Bootstrap support for A3LVM7 as seed ortholog is 100%.

Group of orthologs #1470. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

F6U0I8              	100.00%		A3LNF2              	100.00%
F6QJQ8              	18.73%		
Bootstrap support for F6U0I8 as seed ortholog is 100%.
Bootstrap support for A3LNF2 as seed ortholog is 100%.

Group of orthologs #1471. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 S.stipitis:94

F6V304              	100.00%		A3LQ63              	100.00%
F6YWK0              	9.28%		
Bootstrap support for F6V304 as seed ortholog is 65%.
Alternative seed ortholog is F6X5W4 (16 bits away from this cluster)
Bootstrap support for A3LQ63 as seed ortholog is 100%.

Group of orthologs #1472. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:2

H2XXT0              	100.00%		A3GG43              	100.00%
                    	       		A3LUN7              	21.28%
Bootstrap support for H2XXT0 as seed ortholog is 100%.
Bootstrap support for A3GG43 as seed ortholog is 52%.
Alternative seed ortholog is A3GI91 (2 bits away from this cluster)

Group of orthologs #1473. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

F6TJY9              	100.00%		A3GFI2              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for A3GFI2 as seed ortholog is 100%.

Group of orthologs #1474. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

F6WII1              	100.00%		A3GGJ1              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for A3GGJ1 as seed ortholog is 100%.

Group of orthologs #1475. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.stipitis:23

F6QEE3              	100.00%		A3LYY7              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 92%.
Bootstrap support for A3LYY7 as seed ortholog is 76%.

Group of orthologs #1476. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

F6UG66              	100.00%		A3LVS4              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for A3LVS4 as seed ortholog is 100%.

Group of orthologs #1477. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

F6WYI2              	100.00%		A3LTW7              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 100%.
Bootstrap support for A3LTW7 as seed ortholog is 100%.

Group of orthologs #1478. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.stipitis:94

F6YGF8              	100.00%		A3LTY6              	100.00%
Bootstrap support for F6YGF8 as seed ortholog is 78%.
Bootstrap support for A3LTY6 as seed ortholog is 100%.

Group of orthologs #1479. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:94

F6YVQ1              	100.00%		A3LYA5              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 93%.
Bootstrap support for A3LYA5 as seed ortholog is 100%.

Group of orthologs #1480. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.stipitis:94

H2XTC9              	100.00%		A3LNK8              	100.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for A3LNK8 as seed ortholog is 100%.

Group of orthologs #1481. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.stipitis:12

F6R8N5              	100.00%		A3LZ81              	100.00%
F6YX18              	12.31%		
Bootstrap support for F6R8N5 as seed ortholog is 62%.
Alternative seed ortholog is F6UPT3 (18 bits away from this cluster)
Bootstrap support for A3LZ81 as seed ortholog is 57%.
Alternative seed ortholog is A3LY49 (12 bits away from this cluster)

Group of orthologs #1482. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F6PWH7              	100.00%		A3GH60              	100.00%
Bootstrap support for F6PWH7 as seed ortholog is 100%.
Bootstrap support for A3GH60 as seed ortholog is 100%.

Group of orthologs #1483. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F6PRZ9              	100.00%		A3LP33              	100.00%
Bootstrap support for F6PRZ9 as seed ortholog is 100%.
Bootstrap support for A3LP33 as seed ortholog is 100%.

Group of orthologs #1484. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F6QIV0              	100.00%		A3LWT5              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for A3LWT5 as seed ortholog is 100%.

Group of orthologs #1485. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F6WF37              	100.00%		A3GFJ3              	100.00%
Bootstrap support for F6WF37 as seed ortholog is 100%.
Bootstrap support for A3GFJ3 as seed ortholog is 100%.

Group of orthologs #1486. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.stipitis:93

F6YAM0              	100.00%		A3GF68              	100.00%
Bootstrap support for F6YAM0 as seed ortholog is 71%.
Alternative seed ortholog is F7AEC5 (19 bits away from this cluster)
Bootstrap support for A3GF68 as seed ortholog is 100%.

Group of orthologs #1487. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F7AUH4              	100.00%		A3LNL6              	100.00%
Bootstrap support for F7AUH4 as seed ortholog is 100%.
Bootstrap support for A3LNL6 as seed ortholog is 100%.

Group of orthologs #1488. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F6WGY1              	100.00%		A3LZG5              	100.00%
Bootstrap support for F6WGY1 as seed ortholog is 100%.
Bootstrap support for A3LZG5 as seed ortholog is 100%.

Group of orthologs #1489. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F7AX45              	100.00%		A3LP63              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for A3LP63 as seed ortholog is 100%.

Group of orthologs #1490. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

F7BK44              	100.00%		A3LTX2              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for A3LTX2 as seed ortholog is 100%.

Group of orthologs #1491. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.stipitis:93

H2Y216              	100.00%		A3LUS1              	100.00%
Bootstrap support for H2Y216 as seed ortholog is 100%.
Bootstrap support for A3LUS1 as seed ortholog is 100%.

Group of orthologs #1492. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F6S1J5              	100.00%		A3GI09              	100.00%
F6VL03              	26.68%		
F6YSJ3              	24.03%		
Q5SE06              	22.61%		
F6XRM9              	9.98%		
Bootstrap support for F6S1J5 as seed ortholog is 100%.
Bootstrap support for A3GI09 as seed ortholog is 100%.

Group of orthologs #1493. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F6TBB0              	100.00%		A3LPB8              	100.00%
Bootstrap support for F6TBB0 as seed ortholog is 100%.
Bootstrap support for A3LPB8 as seed ortholog is 100%.

Group of orthologs #1494. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F6U3H2              	100.00%		A3LN93              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 100%.
Bootstrap support for A3LN93 as seed ortholog is 100%.

Group of orthologs #1495. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F6YGD1              	100.00%		A3GHM4              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for A3GHM4 as seed ortholog is 100%.

Group of orthologs #1496. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F6VDY1              	100.00%		A3LWI2              	100.00%
Bootstrap support for F6VDY1 as seed ortholog is 100%.
Bootstrap support for A3LWI2 as seed ortholog is 100%.

Group of orthologs #1497. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F7BML6              	100.00%		A3GIB0              	100.00%
Bootstrap support for F7BML6 as seed ortholog is 100%.
Bootstrap support for A3GIB0 as seed ortholog is 100%.

Group of orthologs #1498. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.stipitis:92

F6ZLL7              	100.00%		A3LW39              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for A3LW39 as seed ortholog is 100%.

Group of orthologs #1499. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.stipitis:91

F6YLR6              	100.00%		A3LWR6              	100.00%
                    	       		A3LWS7              	22.97%
Bootstrap support for F6YLR6 as seed ortholog is 55%.
Alternative seed ortholog is H2XYL6 (7 bits away from this cluster)
Bootstrap support for A3LWR6 as seed ortholog is 100%.

Group of orthologs #1500. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.stipitis:91

F6R8L5              	100.00%		A3LUS9              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for A3LUS9 as seed ortholog is 100%.

Group of orthologs #1501. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.stipitis:91

F6Z5W5              	100.00%		A3GF88              	100.00%
Bootstrap support for F6Z5W5 as seed ortholog is 100%.
Bootstrap support for A3GF88 as seed ortholog is 100%.

Group of orthologs #1502. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.stipitis:91

F7AER5              	100.00%		A3GHB7              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for A3GHB7 as seed ortholog is 100%.

Group of orthologs #1503. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.stipitis:91

F6ZBK7              	100.00%		A3M0A0              	100.00%
Bootstrap support for F6ZBK7 as seed ortholog is 100%.
Bootstrap support for A3M0A0 as seed ortholog is 100%.

Group of orthologs #1504. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.stipitis:91

H2XSS0              	100.00%		A3LV26              	100.00%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for A3LV26 as seed ortholog is 100%.

Group of orthologs #1505. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.stipitis:90

H2XT36              	100.00%		A3LWC8              	100.00%
F7AK54              	8.20%		A3GFD7              	6.98%
Bootstrap support for H2XT36 as seed ortholog is 100%.
Bootstrap support for A3LWC8 as seed ortholog is 100%.

Group of orthologs #1506. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.stipitis:90

F6SYB9              	100.00%		A3LQP6              	100.00%
Bootstrap support for F6SYB9 as seed ortholog is 100%.
Bootstrap support for A3LQP6 as seed ortholog is 100%.

Group of orthologs #1507. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.stipitis:90

F7A4V3              	100.00%		A3GH76              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for A3GH76 as seed ortholog is 100%.

Group of orthologs #1508. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 S.stipitis:44

F6Q9F4              	100.00%		A3LV02              	100.00%
F6W804              	38.77%		
Bootstrap support for F6Q9F4 as seed ortholog is 70%.
Alternative seed ortholog is F6Z6W8 (24 bits away from this cluster)
Bootstrap support for A3LV02 as seed ortholog is 89%.

Group of orthologs #1509. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.stipitis:4

F6SST4              	100.00%		A3LU39              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for A3LU39 as seed ortholog is 56%.
Alternative seed ortholog is A3LSC2 (4 bits away from this cluster)

Group of orthologs #1510. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.stipitis:89

F6XZJ5              	100.00%		A3LRF9              	100.00%
Bootstrap support for F6XZJ5 as seed ortholog is 100%.
Bootstrap support for A3LRF9 as seed ortholog is 100%.

Group of orthologs #1511. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.stipitis:89

F6ZS91              	100.00%		A3LSL1              	100.00%
Bootstrap support for F6ZS91 as seed ortholog is 100%.
Bootstrap support for A3LSL1 as seed ortholog is 100%.

Group of orthologs #1512. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.stipitis:89

Q3MQ22              	100.00%		A3LR68              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for A3LR68 as seed ortholog is 100%.

Group of orthologs #1513. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:88

F6V318              	100.00%		A3LNY7              	100.00%
F6V3M5              	6.01%		
Bootstrap support for F6V318 as seed ortholog is 100%.
Bootstrap support for A3LNY7 as seed ortholog is 100%.

Group of orthologs #1514. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.stipitis:88

F6XBY1              	100.00%		A3LYV7              	100.00%
F7A8X9              	11.65%		
Bootstrap support for F6XBY1 as seed ortholog is 86%.
Bootstrap support for A3LYV7 as seed ortholog is 100%.

Group of orthologs #1515. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:88

F6UNS0              	100.00%		A3GFC4              	100.00%
Bootstrap support for F6UNS0 as seed ortholog is 100%.
Bootstrap support for A3GFC4 as seed ortholog is 100%.

Group of orthologs #1516. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:88

F6SV73              	100.00%		A3LTX8              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for A3LTX8 as seed ortholog is 100%.

Group of orthologs #1517. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:88

F6WFW0              	100.00%		A3LVH5              	100.00%
Bootstrap support for F6WFW0 as seed ortholog is 100%.
Bootstrap support for A3LVH5 as seed ortholog is 100%.

Group of orthologs #1518. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.stipitis:88

F7BGY2              	100.00%		A3LS95              	100.00%
Bootstrap support for F7BGY2 as seed ortholog is 56%.
Alternative seed ortholog is F6TX66 (7 bits away from this cluster)
Bootstrap support for A3LS95 as seed ortholog is 100%.

Group of orthologs #1519. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.stipitis:88

H2Y2A0              	100.00%		A3LR64              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for A3LR64 as seed ortholog is 100%.

Group of orthologs #1520. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:87

F7B757              	100.00%		A3GFT7              	100.00%
H2XNZ2              	100.00%		A3LQB0              	12.39%
F7B763              	69.09%		
H2XQ96              	51.52%		
H2XVH5              	51.31%		
H2Y1L1              	41.36%		
H2XS49              	37.78%		
H2XKR4              	30.10%		
F6RBS2              	15.96%		
F6ZXR3              	10.10%		
Bootstrap support for F7B757 as seed ortholog is 100%.
Bootstrap support for H2XNZ2 as seed ortholog is 100%.
Bootstrap support for A3GFT7 as seed ortholog is 100%.

Group of orthologs #1521. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:14

F6S6I4              	100.00%		A3LNA0              	100.00%
H2XMQ5              	28.08%		
F6SPL5              	22.88%		
Bootstrap support for F6S6I4 as seed ortholog is 100%.
Bootstrap support for A3LNA0 as seed ortholog is 38%.
Alternative seed ortholog is A3GHF3 (14 bits away from this cluster)

Group of orthologs #1522. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:87

F6VM60              	100.00%		A3LT34              	100.00%
H2XLN0              	17.27%		
Bootstrap support for F6VM60 as seed ortholog is 100%.
Bootstrap support for A3LT34 as seed ortholog is 100%.

Group of orthologs #1523. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:87

F6XSK1              	100.00%		A3M0N0              	100.00%
F7AZ18              	10.85%		
Bootstrap support for F6XSK1 as seed ortholog is 100%.
Bootstrap support for A3M0N0 as seed ortholog is 100%.

Group of orthologs #1524. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:87

F6WJ25              	100.00%		A3LPD0              	100.00%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for A3LPD0 as seed ortholog is 100%.

Group of orthologs #1525. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.stipitis:87

F6ZG04              	100.00%		A3GI10              	100.00%
Bootstrap support for F6ZG04 as seed ortholog is 85%.
Bootstrap support for A3GI10 as seed ortholog is 100%.

Group of orthologs #1526. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:87

F7BFG7              	100.00%		A3LPB7              	100.00%
Bootstrap support for F7BFG7 as seed ortholog is 100%.
Bootstrap support for A3LPB7 as seed ortholog is 100%.

Group of orthologs #1527. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.stipitis:87

F6ZI65              	100.00%		A3LVV3              	100.00%
Bootstrap support for F6ZI65 as seed ortholog is 100%.
Bootstrap support for A3LVV3 as seed ortholog is 100%.

Group of orthologs #1528. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:19

F6Y3T4              	100.00%		A3GHK9              	100.00%
F6Y3U3              	31.01%		
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for A3GHK9 as seed ortholog is 80%.

Group of orthologs #1529. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

F6SN27              	100.00%		A3GI57              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #1530. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

F6YJB7              	100.00%		A3LPD8              	100.00%
Bootstrap support for F6YJB7 as seed ortholog is 100%.
Bootstrap support for A3LPD8 as seed ortholog is 100%.

Group of orthologs #1531. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

F6WCB0              	100.00%		A3LXQ6              	100.00%
Bootstrap support for F6WCB0 as seed ortholog is 100%.
Bootstrap support for A3LXQ6 as seed ortholog is 100%.

Group of orthologs #1532. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

F7BD80              	100.00%		A3GGA4              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for A3GGA4 as seed ortholog is 100%.

Group of orthologs #1533. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

H2XKP6              	100.00%		A3GHT8              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for A3GHT8 as seed ortholog is 100%.

Group of orthologs #1534. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

H2XZ76              	100.00%		A3LWI1              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for A3LWI1 as seed ortholog is 100%.

Group of orthologs #1535. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.stipitis:86

Q4H3W1              	100.00%		A3LX58              	100.00%
Bootstrap support for Q4H3W1 as seed ortholog is 100%.
Bootstrap support for A3LX58 as seed ortholog is 100%.

Group of orthologs #1536. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

F6PIG9              	100.00%		A3LU01              	100.00%
Bootstrap support for F6PIG9 as seed ortholog is 100%.
Bootstrap support for A3LU01 as seed ortholog is 100%.

Group of orthologs #1537. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

F6U5L2              	100.00%		A3LP80              	100.00%
Bootstrap support for F6U5L2 as seed ortholog is 100%.
Bootstrap support for A3LP80 as seed ortholog is 100%.

Group of orthologs #1538. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

F7ARN8              	100.00%		A3GHR8              	100.00%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for A3GHR8 as seed ortholog is 100%.

Group of orthologs #1539. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:19

F7A0P7              	100.00%		A3LU04              	100.00%
Bootstrap support for F7A0P7 as seed ortholog is 100%.
Bootstrap support for A3LU04 as seed ortholog is 64%.
Alternative seed ortholog is A3LYA8 (19 bits away from this cluster)

Group of orthologs #1540. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

F7ACJ3              	100.00%		A3LVB7              	100.00%
Bootstrap support for F7ACJ3 as seed ortholog is 100%.
Bootstrap support for A3LVB7 as seed ortholog is 100%.

Group of orthologs #1541. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

H2XK95              	100.00%		A3LXG5              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for A3LXG5 as seed ortholog is 100%.

Group of orthologs #1542. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

H2XLH0              	100.00%		A3LXH3              	100.00%
Bootstrap support for H2XLH0 as seed ortholog is 100%.
Bootstrap support for A3LXH3 as seed ortholog is 100%.

Group of orthologs #1543. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:33

H2XVX4              	100.00%		A3M099              	100.00%
Bootstrap support for H2XVX4 as seed ortholog is 100%.
Bootstrap support for A3M099 as seed ortholog is 93%.

Group of orthologs #1544. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.stipitis:85

H2Y1A3              	100.00%		A3M0L6              	100.00%
Bootstrap support for H2Y1A3 as seed ortholog is 100%.
Bootstrap support for A3M0L6 as seed ortholog is 100%.

Group of orthologs #1545. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F6WVH9              	100.00%		A3GHB8              	100.00%
F6V5Y1              	22.99%		
F6YW02              	19.81%		
F6QJ74              	18.70%		
F6QJA2              	15.65%		
Bootstrap support for F6WVH9 as seed ortholog is 100%.
Bootstrap support for A3GHB8 as seed ortholog is 100%.

Group of orthologs #1546. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F6Q3E6              	100.00%		A3LV73              	100.00%
                    	       		A3LV64              	22.11%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for A3LV73 as seed ortholog is 100%.

Group of orthologs #1547. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F6TUV6              	100.00%		A3LRD0              	100.00%
Bootstrap support for F6TUV6 as seed ortholog is 100%.
Bootstrap support for A3LRD0 as seed ortholog is 100%.

Group of orthologs #1548. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F6ZCF4              	100.00%		A3LSY4              	100.00%
Bootstrap support for F6ZCF4 as seed ortholog is 100%.
Bootstrap support for A3LSY4 as seed ortholog is 100%.

Group of orthologs #1549. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F6ZRA2              	100.00%		A3LS40              	100.00%
Bootstrap support for F6ZRA2 as seed ortholog is 100%.
Bootstrap support for A3LS40 as seed ortholog is 100%.

Group of orthologs #1550. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F7AE51              	100.00%		A3LQX9              	100.00%
Bootstrap support for F7AE51 as seed ortholog is 100%.
Bootstrap support for A3LQX9 as seed ortholog is 100%.

Group of orthologs #1551. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F7APT3              	100.00%		A3LU32              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for A3LU32 as seed ortholog is 100%.

Group of orthologs #1552. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.stipitis:84

F7BEP5              	100.00%		A3LWI5              	100.00%
Bootstrap support for F7BEP5 as seed ortholog is 100%.
Bootstrap support for A3LWI5 as seed ortholog is 100%.

Group of orthologs #1553. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.stipitis:84

H2Y2E7              	100.00%		A3GIA5              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 61%.
Alternative seed ortholog is F6VGI1 (8 bits away from this cluster)
Bootstrap support for A3GIA5 as seed ortholog is 100%.

Group of orthologs #1554. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.stipitis:83

F6YKT9              	100.00%		A3LYA4              	100.00%
F6UHT2              	30.64%		
F6U1L2              	12.34%		
H2XK60              	10.98%		
F7ADR7              	5.87%		
F6Q106              	5.45%		
Bootstrap support for F6YKT9 as seed ortholog is 100%.
Bootstrap support for A3LYA4 as seed ortholog is 100%.

Group of orthologs #1555. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.stipitis:83

H2Y3S8              	100.00%		A3LSI0              	100.00%
F6Z188              	6.53%		
F6YMX2              	5.59%		
Bootstrap support for H2Y3S8 as seed ortholog is 100%.
Bootstrap support for A3LSI0 as seed ortholog is 100%.

Group of orthologs #1556. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.stipitis:83

F7A3S4              	100.00%		A3GG02              	100.00%
F6YQI1              	65.02%		
Bootstrap support for F7A3S4 as seed ortholog is 100%.
Bootstrap support for A3GG02 as seed ortholog is 100%.

Group of orthologs #1557. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.stipitis:83

F6RQ34              	100.00%		A3GGY4              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for A3GGY4 as seed ortholog is 100%.

Group of orthologs #1558. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.stipitis:83

F6THW7              	100.00%		A3LWX1              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 100%.
Bootstrap support for A3LWX1 as seed ortholog is 100%.

Group of orthologs #1559. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.stipitis:83

H2XP71              	100.00%		A3LY64              	100.00%
Bootstrap support for H2XP71 as seed ortholog is 49%.
Alternative seed ortholog is F7B7U2 (13 bits away from this cluster)
Bootstrap support for A3LY64 as seed ortholog is 100%.

Group of orthologs #1560. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.stipitis:82

H2XTL6              	100.00%		A3GI54              	100.00%
F7A7X6              	6.63%		
Bootstrap support for H2XTL6 as seed ortholog is 79%.
Bootstrap support for A3GI54 as seed ortholog is 100%.

Group of orthologs #1561. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

F6Q7D4              	100.00%		A3LQU2              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for A3LQU2 as seed ortholog is 100%.

Group of orthologs #1562. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

A1XDA5              	100.00%		A3LX28              	100.00%
Bootstrap support for A1XDA5 as seed ortholog is 100%.
Bootstrap support for A3LX28 as seed ortholog is 100%.

Group of orthologs #1563. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

F6UE09              	100.00%		A3GIC9              	100.00%
Bootstrap support for F6UE09 as seed ortholog is 100%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #1564. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

F7BBF0              	100.00%		A3LSC0              	100.00%
Bootstrap support for F7BBF0 as seed ortholog is 100%.
Bootstrap support for A3LSC0 as seed ortholog is 100%.

Group of orthologs #1565. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

H2XNI9              	100.00%		A3LX96              	100.00%
Bootstrap support for H2XNI9 as seed ortholog is 100%.
Bootstrap support for A3LX96 as seed ortholog is 100%.

Group of orthologs #1566. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

H2Y013              	100.00%		A3LSY0              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for A3LSY0 as seed ortholog is 100%.

Group of orthologs #1567. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

H2XTZ8              	100.00%		A3LZ68              	100.00%
Bootstrap support for H2XTZ8 as seed ortholog is 100%.
Bootstrap support for A3LZ68 as seed ortholog is 100%.

Group of orthologs #1568. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.stipitis:82

Q1RLD5              	100.00%		A3LQ61              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for A3LQ61 as seed ortholog is 100%.

Group of orthologs #1569. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F7A961              	100.00%		A3GFC2              	100.00%
F6ZXD5              	14.80%		
F6ZV03              	11.67%		
Bootstrap support for F7A961 as seed ortholog is 100%.
Bootstrap support for A3GFC2 as seed ortholog is 100%.

Group of orthologs #1570. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6RXS5              	100.00%		A3LRU8              	100.00%
Bootstrap support for F6RXS5 as seed ortholog is 100%.
Bootstrap support for A3LRU8 as seed ortholog is 100%.

Group of orthologs #1571. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6SD13              	100.00%		A3LSG4              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for A3LSG4 as seed ortholog is 100%.

Group of orthologs #1572. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6V1A9              	100.00%		A3GHX3              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for A3GHX3 as seed ortholog is 100%.

Group of orthologs #1573. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6TDH1              	100.00%		A3LTT1              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for A3LTT1 as seed ortholog is 100%.

Group of orthologs #1574. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6SJ18              	100.00%		A3M0L7              	100.00%
Bootstrap support for F6SJ18 as seed ortholog is 100%.
Bootstrap support for A3M0L7 as seed ortholog is 100%.

Group of orthologs #1575. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6VAW2              	100.00%		A3LXT9              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for A3LXT9 as seed ortholog is 100%.

Group of orthologs #1576. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F6X034              	100.00%		A3LYP8              	100.00%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #1577. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

H2XK69              	100.00%		A3LMZ1              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for A3LMZ1 as seed ortholog is 100%.

Group of orthologs #1578. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

F7AX97              	100.00%		A3LS04              	100.00%
Bootstrap support for F7AX97 as seed ortholog is 100%.
Bootstrap support for A3LS04 as seed ortholog is 100%.

Group of orthologs #1579. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

H2XME2              	100.00%		A3LQZ8              	100.00%
Bootstrap support for H2XME2 as seed ortholog is 100%.
Bootstrap support for A3LQZ8 as seed ortholog is 100%.

Group of orthologs #1580. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

H2XTT8              	100.00%		A3GH20              	100.00%
Bootstrap support for H2XTT8 as seed ortholog is 100%.
Bootstrap support for A3GH20 as seed ortholog is 100%.

Group of orthologs #1581. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.stipitis:81

H2XXU4              	100.00%		A3GIA8              	100.00%
Bootstrap support for H2XXU4 as seed ortholog is 100%.
Bootstrap support for A3GIA8 as seed ortholog is 100%.

Group of orthologs #1582. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

F6SAX1              	100.00%		A3GGY3              	100.00%
Bootstrap support for F6SAX1 as seed ortholog is 100%.
Bootstrap support for A3GGY3 as seed ortholog is 100%.

Group of orthologs #1583. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 S.stipitis:80

F6PHZ4              	100.00%		A3LXQ8              	100.00%
Bootstrap support for F6PHZ4 as seed ortholog is 86%.
Bootstrap support for A3LXQ8 as seed ortholog is 100%.

Group of orthologs #1584. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

F6QLU5              	100.00%		A3LVK8              	100.00%
Bootstrap support for F6QLU5 as seed ortholog is 100%.
Bootstrap support for A3LVK8 as seed ortholog is 100%.

Group of orthologs #1585. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

F6XNX8              	100.00%		A3LPS5              	100.00%
Bootstrap support for F6XNX8 as seed ortholog is 100%.
Bootstrap support for A3LPS5 as seed ortholog is 100%.

Group of orthologs #1586. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

F6ZIQ8              	100.00%		A3LPJ1              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for A3LPJ1 as seed ortholog is 100%.

Group of orthologs #1587. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

F7BPM3              	100.00%		A3LS54              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 100%.
Bootstrap support for A3LS54 as seed ortholog is 100%.

Group of orthologs #1588. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

H2XQ06              	100.00%		A3LS72              	100.00%
Bootstrap support for H2XQ06 as seed ortholog is 100%.
Bootstrap support for A3LS72 as seed ortholog is 100%.

Group of orthologs #1589. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.stipitis:80

H2XZ67              	100.00%		A3LPG7              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for A3LPG7 as seed ortholog is 100%.

Group of orthologs #1590. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:79

H2XLT4              	100.00%		A3LQR6              	100.00%
H2XJL5              	62.21%		
H2XQE2              	51.15%		
Bootstrap support for H2XLT4 as seed ortholog is 100%.
Bootstrap support for A3LQR6 as seed ortholog is 100%.

Group of orthologs #1591. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:79

H2Y3K2              	100.00%		A3LTL2              	100.00%
F6WHB0              	12.94%		
Bootstrap support for H2Y3K2 as seed ortholog is 100%.
Bootstrap support for A3LTL2 as seed ortholog is 100%.

Group of orthologs #1592. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:79

F6SKW2              	100.00%		A3LRS5              	100.00%
Bootstrap support for F6SKW2 as seed ortholog is 100%.
Bootstrap support for A3LRS5 as seed ortholog is 100%.

Group of orthologs #1593. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:79

F6ZQ39              	100.00%		A3GHW6              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for A3GHW6 as seed ortholog is 100%.

Group of orthologs #1594. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.stipitis:79

H2Y0C3              	100.00%		A3LWP7              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for A3LWP7 as seed ortholog is 100%.

Group of orthologs #1595. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.stipitis:78

H2XKD8              	100.00%		A3GFN8              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for A3GFN8 as seed ortholog is 100%.

Group of orthologs #1596. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.stipitis:78

H2XJN3              	100.00%		A3M098              	100.00%
Bootstrap support for H2XJN3 as seed ortholog is 100%.
Bootstrap support for A3M098 as seed ortholog is 100%.

Group of orthologs #1597. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.stipitis:78

H2XPG9              	100.00%		A3LVS3              	100.00%
Bootstrap support for H2XPG9 as seed ortholog is 100%.
Bootstrap support for A3LVS3 as seed ortholog is 100%.

Group of orthologs #1598. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.stipitis:12

H2Y2X6              	100.00%		A3LQ73              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for A3LQ73 as seed ortholog is 67%.
Alternative seed ortholog is A3LTG5 (12 bits away from this cluster)

Group of orthologs #1599. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:77

F6YUB3              	100.00%		A3LRD9              	100.00%
Bootstrap support for F6YUB3 as seed ortholog is 100%.
Bootstrap support for A3LRD9 as seed ortholog is 100%.

Group of orthologs #1600. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:77

H2XV35              	100.00%		A3LPM0              	100.00%
Bootstrap support for H2XV35 as seed ortholog is 100%.
Bootstrap support for A3LPM0 as seed ortholog is 100%.

Group of orthologs #1601. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:77

H2XYD5              	100.00%		A3LN22              	100.00%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for A3LN22 as seed ortholog is 100%.

Group of orthologs #1602. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:77

H2XZU9              	100.00%		A3LSS0              	100.00%
Bootstrap support for H2XZU9 as seed ortholog is 100%.
Bootstrap support for A3LSS0 as seed ortholog is 100%.

Group of orthologs #1603. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.stipitis:77

Q1RL87              	100.00%		A3LXG4              	100.00%
Bootstrap support for Q1RL87 as seed ortholog is 100%.
Bootstrap support for A3LXG4 as seed ortholog is 100%.

Group of orthologs #1604. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

F6YFM8              	100.00%		A3LMY7              	100.00%
                    	       		A3LP70              	9.34%
                    	       		A3LQL2              	6.29%
Bootstrap support for F6YFM8 as seed ortholog is 100%.
Bootstrap support for A3LMY7 as seed ortholog is 100%.

Group of orthologs #1605. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:8

F6S2Y7              	100.00%		A3GGY1              	100.00%
Bootstrap support for F6S2Y7 as seed ortholog is 100%.
Bootstrap support for A3GGY1 as seed ortholog is 60%.
Alternative seed ortholog is A3LZM0 (8 bits away from this cluster)

Group of orthologs #1606. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:30

F6VKX1              	100.00%		A3GFV2              	100.00%
Bootstrap support for F6VKX1 as seed ortholog is 100%.
Bootstrap support for A3GFV2 as seed ortholog is 81%.

Group of orthologs #1607. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

F6WZ37              	100.00%		A3LQI9              	100.00%
Bootstrap support for F6WZ37 as seed ortholog is 100%.
Bootstrap support for A3LQI9 as seed ortholog is 100%.

Group of orthologs #1608. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

F6VLD0              	100.00%		A3M0A8              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for A3M0A8 as seed ortholog is 100%.

Group of orthologs #1609. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

F7BEK1              	100.00%		A3GIA9              	100.00%
Bootstrap support for F7BEK1 as seed ortholog is 100%.
Bootstrap support for A3GIA9 as seed ortholog is 100%.

Group of orthologs #1610. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

F6Z0W4              	100.00%		A3LUH8              	100.00%
Bootstrap support for F6Z0W4 as seed ortholog is 100%.
Bootstrap support for A3LUH8 as seed ortholog is 100%.

Group of orthologs #1611. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:18

H2XZW2              	100.00%		A3GGM9              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for A3GGM9 as seed ortholog is 85%.

Group of orthologs #1612. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

H2Y3F6              	100.00%		A3GF31              	100.00%
Bootstrap support for H2Y3F6 as seed ortholog is 100%.
Bootstrap support for A3GF31 as seed ortholog is 100%.

Group of orthologs #1613. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.stipitis:76

H2XZJ6              	100.00%		A3M0K8              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for A3M0K8 as seed ortholog is 100%.

Group of orthologs #1614. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:2

F6ZCT8              	100.00%		A3LWR5              	100.00%
F7AAW0              	14.71%		
F6X4I5              	10.99%		
F7A801              	8.79%		
Bootstrap support for F6ZCT8 as seed ortholog is 100%.
Bootstrap support for A3LWR5 as seed ortholog is 50%.
Alternative seed ortholog is A3GI96 (2 bits away from this cluster)

Group of orthologs #1615. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:75

F6UMH6              	100.00%		A3LXR6              	100.00%
Q1RL41              	5.97%		
Bootstrap support for F6UMH6 as seed ortholog is 100%.
Bootstrap support for A3LXR6 as seed ortholog is 100%.

Group of orthologs #1616. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:75

F6X139              	100.00%		A3LU64              	100.00%
F6X7G6              	26.94%		
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for A3LU64 as seed ortholog is 100%.

Group of orthologs #1617. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:75

F6QYL2              	100.00%		A3LZY9              	100.00%
Bootstrap support for F6QYL2 as seed ortholog is 100%.
Bootstrap support for A3LZY9 as seed ortholog is 100%.

Group of orthologs #1618. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:75

F6RMT1              	100.00%		A3LYN7              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for A3LYN7 as seed ortholog is 100%.

Group of orthologs #1619. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:75

F6W6Z3              	100.00%		A3LXX4              	100.00%
Bootstrap support for F6W6Z3 as seed ortholog is 100%.
Bootstrap support for A3LXX4 as seed ortholog is 100%.

Group of orthologs #1620. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.stipitis:75

F6WX23              	100.00%		A3LZL2              	100.00%
Bootstrap support for F6WX23 as seed ortholog is 100%.
Bootstrap support for A3LZL2 as seed ortholog is 100%.

Group of orthologs #1621. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.stipitis:16

H2XQR7              	100.00%		A3LR65              	100.00%
Bootstrap support for H2XQR7 as seed ortholog is 67%.
Alternative seed ortholog is F6WLA0 (18 bits away from this cluster)
Bootstrap support for A3LR65 as seed ortholog is 67%.
Alternative seed ortholog is A3GGQ8 (16 bits away from this cluster)

Group of orthologs #1622. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

H2XWE8              	100.00%		A3LNJ5              	100.00%
                    	       		A3GHR3              	41.90%
                    	       		A3LWJ3              	23.97%
                    	       		A3LUQ6              	6.05%
Bootstrap support for H2XWE8 as seed ortholog is 100%.
Bootstrap support for A3LNJ5 as seed ortholog is 100%.

Group of orthologs #1623. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

F6YFU4              	100.00%		A3GG30              	100.00%
F6YFZ5              	61.23%		A3LWM2              	25.84%
Bootstrap support for F6YFU4 as seed ortholog is 100%.
Bootstrap support for A3GG30 as seed ortholog is 100%.

Group of orthologs #1624. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

Q1RLF0              	100.00%		A3LTM3              	100.00%
Q1RPY5              	17.52%		
F6T7F9              	12.50%		
Bootstrap support for Q1RLF0 as seed ortholog is 100%.
Bootstrap support for A3LTM3 as seed ortholog is 100%.

Group of orthologs #1625. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

H2XQ42              	100.00%		A3LXI5              	100.00%
H2Y0K9              	18.85%		
Bootstrap support for H2XQ42 as seed ortholog is 100%.
Bootstrap support for A3LXI5 as seed ortholog is 100%.

Group of orthologs #1626. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

F6QN05              	100.00%		A3LV93              	100.00%
Bootstrap support for F6QN05 as seed ortholog is 100%.
Bootstrap support for A3LV93 as seed ortholog is 100%.

Group of orthologs #1627. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:31

F6U3C1              	100.00%		A3LVY0              	100.00%
Bootstrap support for F6U3C1 as seed ortholog is 100%.
Bootstrap support for A3LVY0 as seed ortholog is 82%.

Group of orthologs #1628. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

F6ZCL3              	100.00%		A3LPW2              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for A3LPW2 as seed ortholog is 100%.

Group of orthologs #1629. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

F6ZF56              	100.00%		A3LQZ4              	100.00%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for A3LQZ4 as seed ortholog is 100%.

Group of orthologs #1630. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.stipitis:74

H2XXI7              	100.00%		A3GFT9              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for A3GFT9 as seed ortholog is 100%.

Group of orthologs #1631. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:73

F6WV27              	100.00%		A3GFI0              	100.00%
F6WVN4              	6.85%		
Bootstrap support for F6WV27 as seed ortholog is 100%.
Bootstrap support for A3GFI0 as seed ortholog is 100%.

Group of orthologs #1632. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:73

F6T1Y9              	100.00%		A3LQ44              	100.00%
Bootstrap support for F6T1Y9 as seed ortholog is 100%.
Bootstrap support for A3LQ44 as seed ortholog is 100%.

Group of orthologs #1633. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:73

H2XVT6              	100.00%		A3GF37              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for A3GF37 as seed ortholog is 100%.

Group of orthologs #1634. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.stipitis:73

H2XYR7              	100.00%		A3LRE6              	100.00%
Bootstrap support for H2XYR7 as seed ortholog is 100%.
Bootstrap support for A3LRE6 as seed ortholog is 100%.

Group of orthologs #1635. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.stipitis:72

F6YI50              	100.00%		A3LXU2              	100.00%
H2XUP5              	8.44%		
F6VWP3              	7.58%		
F6SXL4              	5.84%		
F6UXM4              	5.41%		
Bootstrap support for F6YI50 as seed ortholog is 69%.
Alternative seed ortholog is Q1RLH3 (10 bits away from this cluster)
Bootstrap support for A3LXU2 as seed ortholog is 100%.

Group of orthologs #1636. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:15

F6SFM0              	100.00%		A3GIB6              	100.00%
F7ASI0              	13.04%		
Bootstrap support for F6SFM0 as seed ortholog is 100%.
Bootstrap support for A3GIB6 as seed ortholog is 68%.
Alternative seed ortholog is A3LVI8 (15 bits away from this cluster)

Group of orthologs #1637. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

H2XRT6              	100.00%		A3LU35              	100.00%
                    	       		A3LU36              	24.23%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for A3LU35 as seed ortholog is 100%.

Group of orthologs #1638. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F6QD73              	100.00%		A3LR35              	100.00%
Bootstrap support for F6QD73 as seed ortholog is 100%.
Bootstrap support for A3LR35 as seed ortholog is 100%.

Group of orthologs #1639. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F6PKA8              	100.00%		A3LTD1              	100.00%
Bootstrap support for F6PKA8 as seed ortholog is 100%.
Bootstrap support for A3LTD1 as seed ortholog is 100%.

Group of orthologs #1640. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F6SJW4              	100.00%		A3LMT3              	100.00%
Bootstrap support for F6SJW4 as seed ortholog is 100%.
Bootstrap support for A3LMT3 as seed ortholog is 100%.

Group of orthologs #1641. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F6QDX7              	100.00%		A3LX86              	100.00%
Bootstrap support for F6QDX7 as seed ortholog is 100%.
Bootstrap support for A3LX86 as seed ortholog is 100%.

Group of orthologs #1642. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F6R4A6              	100.00%		A3M020              	100.00%
Bootstrap support for F6R4A6 as seed ortholog is 100%.
Bootstrap support for A3M020 as seed ortholog is 100%.

Group of orthologs #1643. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F7BPY2              	100.00%		A3LQS9              	100.00%
Bootstrap support for F7BPY2 as seed ortholog is 100%.
Bootstrap support for A3LQS9 as seed ortholog is 100%.

Group of orthologs #1644. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

F6ZZC3              	100.00%		A3LXJ8              	100.00%
Bootstrap support for F6ZZC3 as seed ortholog is 100%.
Bootstrap support for A3LXJ8 as seed ortholog is 100%.

Group of orthologs #1645. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

H2Y1B5              	100.00%		A3LMZ0              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for A3LMZ0 as seed ortholog is 100%.

Group of orthologs #1646. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.stipitis:72

H2XWV5              	100.00%		A3LY28              	100.00%
Bootstrap support for H2XWV5 as seed ortholog is 100%.
Bootstrap support for A3LY28 as seed ortholog is 100%.

Group of orthologs #1647. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

F6Y321              	100.00%		A3LU22              	100.00%
                    	       		A3GHM2              	51.88%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for A3LU22 as seed ortholog is 100%.

Group of orthologs #1648. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.stipitis:71

F6TPM4              	100.00%		A3LMU9              	100.00%
Bootstrap support for F6TPM4 as seed ortholog is 72%.
Alternative seed ortholog is F6SN53 (19 bits away from this cluster)
Bootstrap support for A3LMU9 as seed ortholog is 100%.

Group of orthologs #1649. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

F6TV26              	100.00%		A3GIB3              	100.00%
Bootstrap support for F6TV26 as seed ortholog is 100%.
Bootstrap support for A3GIB3 as seed ortholog is 100%.

Group of orthologs #1650. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

F6XS68              	100.00%		A3GGB5              	100.00%
Bootstrap support for F6XS68 as seed ortholog is 100%.
Bootstrap support for A3GGB5 as seed ortholog is 100%.

Group of orthologs #1651. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

F6WQJ1              	100.00%		A3LS67              	100.00%
Bootstrap support for F6WQJ1 as seed ortholog is 100%.
Bootstrap support for A3LS67 as seed ortholog is 100%.

Group of orthologs #1652. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

H2XM22              	100.00%		A3GGT6              	100.00%
Bootstrap support for H2XM22 as seed ortholog is 100%.
Bootstrap support for A3GGT6 as seed ortholog is 100%.

Group of orthologs #1653. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

H2XPE3              	100.00%		A3GG04              	100.00%
Bootstrap support for H2XPE3 as seed ortholog is 100%.
Bootstrap support for A3GG04 as seed ortholog is 100%.

Group of orthologs #1654. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.stipitis:71

H2XXY6              	100.00%		A3LPJ0              	100.00%
Bootstrap support for H2XXY6 as seed ortholog is 100%.
Bootstrap support for A3LPJ0 as seed ortholog is 100%.

Group of orthologs #1655. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.stipitis:70

F6U7B2              	100.00%		A3LVN8              	100.00%
Bootstrap support for F6U7B2 as seed ortholog is 57%.
Alternative seed ortholog is F6Z7L3 (1 bits away from this cluster)
Bootstrap support for A3LVN8 as seed ortholog is 100%.

Group of orthologs #1656. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.stipitis:70

F6ZED0              	100.00%		A3LXT7              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for A3LXT7 as seed ortholog is 100%.

Group of orthologs #1657. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.stipitis:1

F6X9C7              	100.00%		A3M0K2              	100.00%
F6Y7T8              	100.00%		
H2XY34              	51.06%		
H2XPK9              	47.97%		
F6VCD8              	14.51%		
F6SGH3              	9.09%		
H2Y1W9              	8.51%		
Bootstrap support for F6X9C7 as seed ortholog is 50%.
Alternative seed ortholog is H2XQB0 (8 bits away from this cluster)
Bootstrap support for F6Y7T8 as seed ortholog is 69%.
Alternative seed ortholog is H2XQB0 (8 bits away from this cluster)
Bootstrap support for A3M0K2 as seed ortholog is 78%.

Group of orthologs #1658. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.stipitis:69

F6RRS1              	100.00%		A3GHL9              	100.00%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for A3GHL9 as seed ortholog is 100%.

Group of orthologs #1659. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.stipitis:69

F6QFA2              	100.00%		A3LW30              	100.00%
Bootstrap support for F6QFA2 as seed ortholog is 100%.
Bootstrap support for A3LW30 as seed ortholog is 100%.

Group of orthologs #1660. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.stipitis:69

H2XP92              	100.00%		A3GFP8              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for A3GFP8 as seed ortholog is 100%.

Group of orthologs #1661. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.stipitis:69

H2XWJ8              	100.00%		A3GFR3              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for A3GFR3 as seed ortholog is 100%.

Group of orthologs #1662. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:68

F6YLJ0              	100.00%		A3GI43              	100.00%
F7AX01              	100.00%		A3LRQ0              	100.00%
F6TN12              	68.47%		A3LX05              	84.61%
F6VIM5              	50.87%		
F6ZTL3              	48.46%		
F7AMK6              	44.69%		
F6ZAB8              	44.31%		
F6V693              	35.42%		
F6SD48              	31.27%		
F6V9J8              	24.31%		
F6Z382              	16.41%		
Bootstrap support for F6YLJ0 as seed ortholog is 100%.
Bootstrap support for F7AX01 as seed ortholog is 100%.
Bootstrap support for A3GI43 as seed ortholog is 100%.
Bootstrap support for A3LRQ0 as seed ortholog is 100%.

Group of orthologs #1663. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:68

F6V6J6              	100.00%		A3LW61              	100.00%
F6U1X0              	31.94%		A3LYX9              	60.39%
F7AC23              	27.50%		
F7AXK5              	20.24%		
F6Z0A0              	20.15%		
Bootstrap support for F6V6J6 as seed ortholog is 100%.
Bootstrap support for A3LW61 as seed ortholog is 100%.

Group of orthologs #1664. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:68

F6QGW5              	100.00%		A3LPU8              	100.00%
Bootstrap support for F6QGW5 as seed ortholog is 100%.
Bootstrap support for A3LPU8 as seed ortholog is 100%.

Group of orthologs #1665. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:68

F6ZA91              	100.00%		A3GFX7              	100.00%
Bootstrap support for F6ZA91 as seed ortholog is 100%.
Bootstrap support for A3GFX7 as seed ortholog is 100%.

Group of orthologs #1666. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:68

H2XRS4              	100.00%		A3LN34              	100.00%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for A3LN34 as seed ortholog is 100%.

Group of orthologs #1667. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.stipitis:68

H2XQ41              	100.00%		A3LQ36              	100.00%
Bootstrap support for H2XQ41 as seed ortholog is 100%.
Bootstrap support for A3LQ36 as seed ortholog is 100%.

Group of orthologs #1668. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F6T0L9              	100.00%		A3LY07              	100.00%
F6VP14              	6.13%		
Bootstrap support for F6T0L9 as seed ortholog is 100%.
Bootstrap support for A3LY07 as seed ortholog is 100%.

Group of orthologs #1669. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F6YQB8              	100.00%		A3LN56              	100.00%
                    	       		A3GEU9              	94.72%
Bootstrap support for F6YQB8 as seed ortholog is 100%.
Bootstrap support for A3LN56 as seed ortholog is 100%.

Group of orthologs #1670. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F6UUI8              	100.00%		A3M0D5              	100.00%
                    	       		A3GFI1              	19.80%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for A3M0D5 as seed ortholog is 100%.

Group of orthologs #1671. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F6T052              	100.00%		A3GI12              	100.00%
Bootstrap support for F6T052 as seed ortholog is 100%.
Bootstrap support for A3GI12 as seed ortholog is 100%.

Group of orthologs #1672. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F6WQS5              	100.00%		A3GHD4              	100.00%
Bootstrap support for F6WQS5 as seed ortholog is 100%.
Bootstrap support for A3GHD4 as seed ortholog is 100%.

Group of orthologs #1673. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:16

F6XHB2              	100.00%		A3LU38              	100.00%
Bootstrap support for F6XHB2 as seed ortholog is 100%.
Bootstrap support for A3LU38 as seed ortholog is 75%.

Group of orthologs #1674. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F6UN42              	100.00%		A3M0J1              	100.00%
Bootstrap support for F6UN42 as seed ortholog is 100%.
Bootstrap support for A3M0J1 as seed ortholog is 100%.

Group of orthologs #1675. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.stipitis:67

H2XJX4              	100.00%		A3LPL5              	100.00%
Bootstrap support for H2XJX4 as seed ortholog is 73%.
Alternative seed ortholog is H2XXY8 (13 bits away from this cluster)
Bootstrap support for A3LPL5 as seed ortholog is 100%.

Group of orthologs #1676. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

F7B6C9              	100.00%		A3M0I5              	100.00%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for A3M0I5 as seed ortholog is 100%.

Group of orthologs #1677. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

H2XR90              	100.00%		A3LXX7              	100.00%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for A3LXX7 as seed ortholog is 100%.

Group of orthologs #1678. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.stipitis:67

H2Y026              	100.00%		A3LU03              	100.00%
Bootstrap support for H2Y026 as seed ortholog is 100%.
Bootstrap support for A3LU03 as seed ortholog is 100%.

Group of orthologs #1679. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.stipitis:66

F6ZGB0              	100.00%		A3LP94              	100.00%
F6V7U4              	5.36%		
Bootstrap support for F6ZGB0 as seed ortholog is 100%.
Bootstrap support for A3LP94 as seed ortholog is 100%.

Group of orthologs #1680. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.stipitis:66

F6TAY9              	100.00%		A3GHN3              	100.00%
Bootstrap support for F6TAY9 as seed ortholog is 100%.
Bootstrap support for A3GHN3 as seed ortholog is 100%.

Group of orthologs #1681. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.stipitis:21

F6ZBF1              	100.00%		A3LND7              	100.00%
Bootstrap support for F6ZBF1 as seed ortholog is 100%.
Bootstrap support for A3LND7 as seed ortholog is 76%.

Group of orthologs #1682. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.stipitis:66

F6Z541              	100.00%		A3LYA2              	100.00%
Bootstrap support for F6Z541 as seed ortholog is 92%.
Bootstrap support for A3LYA2 as seed ortholog is 100%.

Group of orthologs #1683. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.stipitis:66

F7AG13              	100.00%		A3LZU8              	100.00%
Bootstrap support for F7AG13 as seed ortholog is 100%.
Bootstrap support for A3LZU8 as seed ortholog is 100%.

Group of orthologs #1684. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:65

F6UQX1              	100.00%		A3GH19              	100.00%
H2XKI3              	7.03%		A3LT06              	9.93%
                    	       		A3LSQ9              	9.19%
                    	       		A3LT05              	8.76%
                    	       		A3LU62              	8.24%
Bootstrap support for F6UQX1 as seed ortholog is 100%.
Bootstrap support for A3GH19 as seed ortholog is 100%.

Group of orthologs #1685. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:65

F6QDJ6              	100.00%		A3GHX7              	100.00%
                    	       		A3LR88              	100.00%
Bootstrap support for F6QDJ6 as seed ortholog is 100%.
Bootstrap support for A3GHX7 as seed ortholog is 100%.
Bootstrap support for A3LR88 as seed ortholog is 100%.

Group of orthologs #1686. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:65

F6W7H5              	100.00%		A3GFU0              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for A3GFU0 as seed ortholog is 100%.

Group of orthologs #1687. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:65

F6YWH4              	100.00%		A3LV90              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for A3LV90 as seed ortholog is 100%.

Group of orthologs #1688. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.stipitis:65

H2XQR9              	100.00%		A3LUS2              	100.00%
Bootstrap support for H2XQR9 as seed ortholog is 100%.
Bootstrap support for A3LUS2 as seed ortholog is 100%.

Group of orthologs #1689. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:64

F6Z8B6              	100.00%		A3GGI2              	100.00%
F6RAJ1              	100.00%		A3LW46              	100.00%
F6WRW7              	52.94%		
F6XUL4              	29.67%		
F7AE92              	27.88%		
F7B3N6              	26.34%		
F6Z3A0              	8.37%		
Bootstrap support for F6Z8B6 as seed ortholog is 100%.
Bootstrap support for F6RAJ1 as seed ortholog is 100%.
Bootstrap support for A3GGI2 as seed ortholog is 100%.
Bootstrap support for A3LW46 as seed ortholog is 100%.

Group of orthologs #1690. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:64

F6XW35              	100.00%		A3GGT2              	100.00%
                    	       		A3GGV1              	6.14%
Bootstrap support for F6XW35 as seed ortholog is 100%.
Bootstrap support for A3GGT2 as seed ortholog is 100%.

Group of orthologs #1691. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:64

H2XW88              	100.00%		A3LQG8              	100.00%
F7AX27              	42.86%		
Bootstrap support for H2XW88 as seed ortholog is 100%.
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #1692. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:64

F6VKW3              	100.00%		A3LVA6              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for A3LVA6 as seed ortholog is 100%.

Group of orthologs #1693. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:64

F6XIG6              	100.00%		A3LU87              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for A3LU87 as seed ortholog is 100%.

Group of orthologs #1694. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.stipitis:64

Q8I7D9              	100.00%		A3LQ59              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for A3LQ59 as seed ortholog is 100%.

Group of orthologs #1695. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

H2XUX5              	100.00%		A3LRF4              	100.00%
H2XX60              	18.99%		
F6TUQ2              	15.35%		
Bootstrap support for H2XUX5 as seed ortholog is 100%.
Bootstrap support for A3LRF4 as seed ortholog is 100%.

Group of orthologs #1696. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

F6T3G6              	100.00%		A3LRY6              	100.00%
F6WG12              	48.12%		
Bootstrap support for F6T3G6 as seed ortholog is 100%.
Bootstrap support for A3LRY6 as seed ortholog is 100%.

Group of orthologs #1697. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

F6V377              	100.00%		A3GIC5              	100.00%
                    	       		A3GIC1              	34.07%
Bootstrap support for F6V377 as seed ortholog is 100%.
Bootstrap support for A3GIC5 as seed ortholog is 100%.

Group of orthologs #1698. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

F6T4U7              	100.00%		A3LTZ8              	100.00%
F6ZUV3              	34.64%		
Bootstrap support for F6T4U7 as seed ortholog is 100%.
Bootstrap support for A3LTZ8 as seed ortholog is 100%.

Group of orthologs #1699. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

F6VD90              	100.00%		A3LSU3              	100.00%
                    	       		A3LQR0              	20.74%
Bootstrap support for F6VD90 as seed ortholog is 100%.
Bootstrap support for A3LSU3 as seed ortholog is 100%.

Group of orthologs #1700. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

F6QH43              	100.00%		A3LV38              	100.00%
Bootstrap support for F6QH43 as seed ortholog is 100%.
Bootstrap support for A3LV38 as seed ortholog is 100%.

Group of orthologs #1701. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:13

F6YC04              	100.00%		A3GFD4              	100.00%
Bootstrap support for F6YC04 as seed ortholog is 100%.
Bootstrap support for A3GFD4 as seed ortholog is 64%.
Alternative seed ortholog is A3LVV4 (13 bits away from this cluster)

Group of orthologs #1702. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

F6Y7F7              	100.00%		A3GHT4              	100.00%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for A3GHT4 as seed ortholog is 100%.

Group of orthologs #1703. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

H2Y167              	100.00%		A3GGN2              	100.00%
Bootstrap support for H2Y167 as seed ortholog is 100%.
Bootstrap support for A3GGN2 as seed ortholog is 100%.

Group of orthologs #1704. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.stipitis:63

H2XLD1              	100.00%		A3M0M4              	100.00%
Bootstrap support for H2XLD1 as seed ortholog is 100%.
Bootstrap support for A3M0M4 as seed ortholog is 100%.

Group of orthologs #1705. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6T302              	100.00%		A3LQZ7              	100.00%
Q4H2S2              	14.55%		
Bootstrap support for F6T302 as seed ortholog is 100%.
Bootstrap support for A3LQZ7 as seed ortholog is 100%.

Group of orthologs #1706. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6XY36              	100.00%		A3GGS3              	100.00%
F6R1K9              	20.89%		
Bootstrap support for F6XY36 as seed ortholog is 100%.
Bootstrap support for A3GGS3 as seed ortholog is 100%.

Group of orthologs #1707. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6Q558              	100.00%		A3LTH2              	100.00%
Bootstrap support for F6Q558 as seed ortholog is 100%.
Bootstrap support for A3LTH2 as seed ortholog is 100%.

Group of orthologs #1708. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:18

F6S014              	100.00%		A3LUV5              	100.00%
Bootstrap support for F6S014 as seed ortholog is 100%.
Bootstrap support for A3LUV5 as seed ortholog is 72%.
Alternative seed ortholog is A3LW47 (18 bits away from this cluster)

Group of orthologs #1709. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6WIH5              	100.00%		A3GG55              	100.00%
Bootstrap support for F6WIH5 as seed ortholog is 100%.
Bootstrap support for A3GG55 as seed ortholog is 100%.

Group of orthologs #1710. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6QBI4              	100.00%		A3LYY3              	100.00%
Bootstrap support for F6QBI4 as seed ortholog is 100%.
Bootstrap support for A3LYY3 as seed ortholog is 100%.

Group of orthologs #1711. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6XWU5              	100.00%		A3LNY0              	100.00%
Bootstrap support for F6XWU5 as seed ortholog is 100%.
Bootstrap support for A3LNY0 as seed ortholog is 100%.

Group of orthologs #1712. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:10

F6T5I8              	100.00%		A3LZM5              	100.00%
Bootstrap support for F6T5I8 as seed ortholog is 100%.
Bootstrap support for A3LZM5 as seed ortholog is 65%.
Alternative seed ortholog is A3LQE9 (10 bits away from this cluster)

Group of orthologs #1713. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.stipitis:62

F6VEV6              	100.00%		A3LWF7              	100.00%
Bootstrap support for F6VEV6 as seed ortholog is 57%.
Alternative seed ortholog is F6V1T3 (5 bits away from this cluster)
Bootstrap support for A3LWF7 as seed ortholog is 100%.

Group of orthologs #1714. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F7ANT6              	100.00%		A3LN77              	100.00%
Bootstrap support for F7ANT6 as seed ortholog is 100%.
Bootstrap support for A3LN77 as seed ortholog is 100%.

Group of orthologs #1715. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6XH64              	100.00%		A3LXB4              	100.00%
Bootstrap support for F6XH64 as seed ortholog is 100%.
Bootstrap support for A3LXB4 as seed ortholog is 100%.

Group of orthologs #1716. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

F6YX22              	100.00%		A3LVA5              	100.00%
Bootstrap support for F6YX22 as seed ortholog is 100%.
Bootstrap support for A3LVA5 as seed ortholog is 100%.

Group of orthologs #1717. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

H2XTK5              	100.00%		A3LUE5              	100.00%
Bootstrap support for H2XTK5 as seed ortholog is 100%.
Bootstrap support for A3LUE5 as seed ortholog is 100%.

Group of orthologs #1718. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

H2XVS6              	100.00%		A3LSE2              	100.00%
Bootstrap support for H2XVS6 as seed ortholog is 100%.
Bootstrap support for A3LSE2 as seed ortholog is 100%.

Group of orthologs #1719. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.stipitis:62

H2XS95              	100.00%		A3LVX0              	100.00%
Bootstrap support for H2XS95 as seed ortholog is 100%.
Bootstrap support for A3LVX0 as seed ortholog is 100%.

Group of orthologs #1720. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F6WI19              	100.00%		A3LYJ9              	100.00%
Q1RL20              	76.83%		
Q1RL21              	59.72%		
H2XMP0              	53.67%		
H2XZ50              	51.61%		
Bootstrap support for F6WI19 as seed ortholog is 100%.
Bootstrap support for A3LYJ9 as seed ortholog is 100%.

Group of orthologs #1721. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F6T8A4              	100.00%		A3LSY3              	100.00%
Bootstrap support for F6T8A4 as seed ortholog is 100%.
Bootstrap support for A3LSY3 as seed ortholog is 100%.

Group of orthologs #1722. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F6T047              	100.00%		A3LZW1              	100.00%
Bootstrap support for F6T047 as seed ortholog is 100%.
Bootstrap support for A3LZW1 as seed ortholog is 100%.

Group of orthologs #1723. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F6XYG2              	100.00%		A3LQZ5              	100.00%
Bootstrap support for F6XYG2 as seed ortholog is 100%.
Bootstrap support for A3LQZ5 as seed ortholog is 100%.

Group of orthologs #1724. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F6XM37              	100.00%		A3LYG3              	100.00%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for A3LYG3 as seed ortholog is 100%.

Group of orthologs #1725. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F6YAY9              	100.00%		A3LXC9              	100.00%
Bootstrap support for F6YAY9 as seed ortholog is 100%.
Bootstrap support for A3LXC9 as seed ortholog is 100%.

Group of orthologs #1726. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

F7AD29              	100.00%		A3LW75              	100.00%
Bootstrap support for F7AD29 as seed ortholog is 100%.
Bootstrap support for A3LW75 as seed ortholog is 100%.

Group of orthologs #1727. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.stipitis:61

H2XVR3              	100.00%		A3LTB9              	100.00%
Bootstrap support for H2XVR3 as seed ortholog is 100%.
Bootstrap support for A3LTB9 as seed ortholog is 100%.

Group of orthologs #1728. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:60

F6WLM3              	100.00%		A3LN03              	100.00%
F6WM93              	71.64%		
F6SWW8              	53.31%		
F6YSD1              	50.47%		
F6VS92              	43.38%		
F6RFT0              	43.19%		
H2XN22              	33.84%		
Bootstrap support for F6WLM3 as seed ortholog is 100%.
Bootstrap support for A3LN03 as seed ortholog is 100%.

Group of orthologs #1729. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:60

F7A7T2              	100.00%		A3LW03              	100.00%
F6V2S0              	20.30%		
H2XQR2              	17.01%		
F6XVZ5              	16.72%		
F6SZN1              	14.33%		
F6Y516              	11.34%		
Bootstrap support for F7A7T2 as seed ortholog is 100%.
Bootstrap support for A3LW03 as seed ortholog is 100%.

Group of orthologs #1730. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:60

F6V899              	100.00%		A3LQQ2              	100.00%
                    	       		A3LPP0              	8.52%
Bootstrap support for F6V899 as seed ortholog is 100%.
Bootstrap support for A3LQQ2 as seed ortholog is 100%.

Group of orthologs #1731. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:60

H2XSN3              	100.00%		A3LUA5              	100.00%
                    	       		A3GGR1              	83.16%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for A3LUA5 as seed ortholog is 100%.

Group of orthologs #1732. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:60

F6QGB8              	100.00%		A3LXC0              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for A3LXC0 as seed ortholog is 100%.

Group of orthologs #1733. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.stipitis:60

F6TJV9              	100.00%		A3LZN7              	100.00%
Bootstrap support for F6TJV9 as seed ortholog is 100%.
Bootstrap support for A3LZN7 as seed ortholog is 100%.

Group of orthologs #1734. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.stipitis:59

F6TKL9              	100.00%		A3LUV9              	100.00%
Bootstrap support for F6TKL9 as seed ortholog is 59%.
Alternative seed ortholog is F7AWQ7 (9 bits away from this cluster)
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #1735. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:59

F7B349              	100.00%		A3LSH6              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for A3LSH6 as seed ortholog is 100%.

Group of orthologs #1736. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:59

F7ATY3              	100.00%		A3LY50              	100.00%
Bootstrap support for F7ATY3 as seed ortholog is 100%.
Bootstrap support for A3LY50 as seed ortholog is 100%.

Group of orthologs #1737. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:59

H2XYK0              	100.00%		A3GHP7              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for A3GHP7 as seed ortholog is 100%.

Group of orthologs #1738. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.stipitis:59

Q4H3E0              	100.00%		A3LZY5              	100.00%
Bootstrap support for Q4H3E0 as seed ortholog is 100%.
Bootstrap support for A3LZY5 as seed ortholog is 100%.

Group of orthologs #1739. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.stipitis:58

F6S8K0              	100.00%		A3LW00              	100.00%
                    	       		A3LVZ9              	26.94%
Bootstrap support for F6S8K0 as seed ortholog is 100%.
Bootstrap support for A3LW00 as seed ortholog is 100%.

Group of orthologs #1740. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.stipitis:58

F7BDK3              	100.00%		A3LTU3              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for A3LTU3 as seed ortholog is 100%.

Group of orthologs #1741. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.stipitis:58

H2XT41              	100.00%		A3LQI8              	100.00%
Bootstrap support for H2XT41 as seed ortholog is 100%.
Bootstrap support for A3LQI8 as seed ortholog is 100%.

Group of orthologs #1742. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.stipitis:58

H2XWK5              	100.00%		A3LWJ9              	100.00%
Bootstrap support for H2XWK5 as seed ortholog is 100%.
Bootstrap support for A3LWJ9 as seed ortholog is 100%.

Group of orthologs #1743. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.stipitis:58

H2Y058              	100.00%		A3LWV2              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for A3LWV2 as seed ortholog is 100%.

Group of orthologs #1744. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F7A0S5              	100.00%		A3LVQ7              	100.00%
F6U621              	57.76%		
F7A786              	57.14%		
F7AQ12              	18.16%		
Bootstrap support for F7A0S5 as seed ortholog is 100%.
Bootstrap support for A3LVQ7 as seed ortholog is 100%.

Group of orthologs #1745. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F7BAU4              	100.00%		A3LRY8              	100.00%
H2XT83              	11.14%		A3GFR6              	25.11%
Bootstrap support for F7BAU4 as seed ortholog is 100%.
Bootstrap support for A3LRY8 as seed ortholog is 100%.

Group of orthologs #1746. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F6SPI7              	100.00%		A3GH00              	100.00%
F7AI19              	10.63%		
Bootstrap support for F6SPI7 as seed ortholog is 100%.
Bootstrap support for A3GH00 as seed ortholog is 100%.

Group of orthologs #1747. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F6Q2W2              	100.00%		A3M0L8              	100.00%
F6Y4J7              	6.11%		
Bootstrap support for F6Q2W2 as seed ortholog is 100%.
Bootstrap support for A3M0L8 as seed ortholog is 100%.

Group of orthologs #1748. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

H2XTD6              	100.00%		A3LUK6              	100.00%
                    	       		A3LSR2              	10.31%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for A3LUK6 as seed ortholog is 100%.

Group of orthologs #1749. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.stipitis:57

F6RL73              	100.00%		A3LT04              	100.00%
Bootstrap support for F6RL73 as seed ortholog is 81%.
Bootstrap support for A3LT04 as seed ortholog is 100%.

Group of orthologs #1750. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F6WEG7              	100.00%		A3LRA9              	100.00%
Bootstrap support for F6WEG7 as seed ortholog is 100%.
Bootstrap support for A3LRA9 as seed ortholog is 100%.

Group of orthologs #1751. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F6UV64              	100.00%		A3M008              	100.00%
Bootstrap support for F6UV64 as seed ortholog is 100%.
Bootstrap support for A3M008 as seed ortholog is 100%.

Group of orthologs #1752. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F7AB27              	100.00%		A3LNE8              	100.00%
Bootstrap support for F7AB27 as seed ortholog is 100%.
Bootstrap support for A3LNE8 as seed ortholog is 100%.

Group of orthologs #1753. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

F7AE79              	100.00%		A3LQ12              	100.00%
Bootstrap support for F7AE79 as seed ortholog is 100%.
Bootstrap support for A3LQ12 as seed ortholog is 100%.

Group of orthologs #1754. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

H2Y219              	100.00%		A3GEW3              	100.00%
Bootstrap support for H2Y219 as seed ortholog is 100%.
Bootstrap support for A3GEW3 as seed ortholog is 100%.

Group of orthologs #1755. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.stipitis:57

H2XQ07              	100.00%		A3LX16              	100.00%
Bootstrap support for H2XQ07 as seed ortholog is 100%.
Bootstrap support for A3LX16 as seed ortholog is 100%.

Group of orthologs #1756. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.stipitis:56

H2XZI8              	100.00%		A3LZE3              	100.00%
H2XQD2              	35.01%		
H2XVI2              	31.18%		
F7AVL3              	27.34%		
H2XNU9              	10.55%		
H2XQ86              	5.52%		
Bootstrap support for H2XZI8 as seed ortholog is 100%.
Bootstrap support for A3LZE3 as seed ortholog is 100%.

Group of orthologs #1757. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.stipitis:56

F6VR17              	100.00%		A3LZ05              	100.00%
Bootstrap support for F6VR17 as seed ortholog is 100%.
Bootstrap support for A3LZ05 as seed ortholog is 100%.

Group of orthologs #1758. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.stipitis:56

H2XM31              	100.00%		A3LQH2              	100.00%
Bootstrap support for H2XM31 as seed ortholog is 100%.
Bootstrap support for A3LQH2 as seed ortholog is 100%.

Group of orthologs #1759. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.stipitis:56

H2XS91              	100.00%		A3LP92              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for A3LP92 as seed ortholog is 100%.

Group of orthologs #1760. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.stipitis:55

H2XPZ5              	100.00%		A3LN19              	100.00%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for A3LN19 as seed ortholog is 100%.

Group of orthologs #1761. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.stipitis:54

H2XNE6              	100.00%		A3LNC5              	100.00%
H2XR92              	55.36%		
F6YNR2              	25.48%		
F6S021              	23.20%		
Bootstrap support for H2XNE6 as seed ortholog is 100%.
Bootstrap support for A3LNC5 as seed ortholog is 100%.

Group of orthologs #1762. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.stipitis:54

F6XMZ3              	100.00%		A3GI15              	100.00%
                    	       		A3M0P7              	37.76%
Bootstrap support for F6XMZ3 as seed ortholog is 100%.
Bootstrap support for A3GI15 as seed ortholog is 100%.

Group of orthologs #1763. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.stipitis:54

F6PWX0              	100.00%		A3LSH9              	100.00%
Bootstrap support for F6PWX0 as seed ortholog is 100%.
Bootstrap support for A3LSH9 as seed ortholog is 100%.

Group of orthologs #1764. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.stipitis:54

F6Z833              	100.00%		A3LX84              	100.00%
Bootstrap support for F6Z833 as seed ortholog is 100%.
Bootstrap support for A3LX84 as seed ortholog is 100%.

Group of orthologs #1765. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.stipitis:54

H2XK36              	100.00%		A3LWF1              	100.00%
Bootstrap support for H2XK36 as seed ortholog is 100%.
Bootstrap support for A3LWF1 as seed ortholog is 100%.

Group of orthologs #1766. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:53

F6QSJ0              	100.00%		A3LUP1              	100.00%
                    	       		A3LP28              	29.10%
Bootstrap support for F6QSJ0 as seed ortholog is 100%.
Bootstrap support for A3LUP1 as seed ortholog is 100%.

Group of orthologs #1767. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:53

F6WKP3              	100.00%		A3LPN9              	100.00%
F6TTC3              	5.04%		
Bootstrap support for F6WKP3 as seed ortholog is 100%.
Bootstrap support for A3LPN9 as seed ortholog is 100%.

Group of orthologs #1768. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:53

H2XRR7              	100.00%		A3LY36              	100.00%
F6WUA7              	12.30%		
Bootstrap support for H2XRR7 as seed ortholog is 100%.
Bootstrap support for A3LY36 as seed ortholog is 100%.

Group of orthologs #1769. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.stipitis:53

F6PM15              	100.00%		A3LWS5              	100.00%
Bootstrap support for F6PM15 as seed ortholog is 100%.
Bootstrap support for A3LWS5 as seed ortholog is 100%.

Group of orthologs #1770. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

F7B0D1              	100.00%		A3LNQ4              	100.00%
F6UAD5              	60.90%		A3GGK1              	47.79%
F7BJS1              	16.45%		A3LNZ6              	9.26%
Bootstrap support for F7B0D1 as seed ortholog is 100%.
Bootstrap support for A3LNQ4 as seed ortholog is 100%.

Group of orthologs #1771. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

H2XMF4              	100.00%		A3LTJ1              	100.00%
                    	       		A3LNT9              	18.84%
Bootstrap support for H2XMF4 as seed ortholog is 100%.
Bootstrap support for A3LTJ1 as seed ortholog is 100%.

Group of orthologs #1772. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

F6ZD62              	100.00%		A3GGV0              	100.00%
Bootstrap support for F6ZD62 as seed ortholog is 100%.
Bootstrap support for A3GGV0 as seed ortholog is 100%.

Group of orthologs #1773. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

F7AF59              	100.00%		A3GF13              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for A3GF13 as seed ortholog is 100%.

Group of orthologs #1774. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

H2XTG7              	100.00%		A3GGV5              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for A3GGV5 as seed ortholog is 100%.

Group of orthologs #1775. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

H2XLR3              	100.00%		A3LXC7              	100.00%
Bootstrap support for H2XLR3 as seed ortholog is 100%.
Bootstrap support for A3LXC7 as seed ortholog is 100%.

Group of orthologs #1776. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.stipitis:52

H2XZE6              	100.00%		A3GGF5              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for A3GGF5 as seed ortholog is 100%.

Group of orthologs #1777. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:51

F6QFI4              	100.00%		A3LSW1              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for A3LSW1 as seed ortholog is 100%.

Group of orthologs #1778. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:51

F6S095              	100.00%		A3LXI1              	100.00%
Bootstrap support for F6S095 as seed ortholog is 100%.
Bootstrap support for A3LXI1 as seed ortholog is 100%.

Group of orthologs #1779. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:51

F6XCL4              	100.00%		A3LR77              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for A3LR77 as seed ortholog is 100%.

Group of orthologs #1780. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:51

F7AWW1              	100.00%		A3LR98              	100.00%
Bootstrap support for F7AWW1 as seed ortholog is 100%.
Bootstrap support for A3LR98 as seed ortholog is 100%.

Group of orthologs #1781. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:51

H2XP82              	100.00%		A3GI04              	100.00%
Bootstrap support for H2XP82 as seed ortholog is 100%.
Bootstrap support for A3GI04 as seed ortholog is 100%.

Group of orthologs #1782. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.stipitis:51

H2XSA5              	100.00%		A3LVF3              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for A3LVF3 as seed ortholog is 100%.

Group of orthologs #1783. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.stipitis:50

F6TGC0              	100.00%		A3GEX2              	100.00%
Bootstrap support for F6TGC0 as seed ortholog is 46%.
Alternative seed ortholog is F6WRI2 (5 bits away from this cluster)
Bootstrap support for A3GEX2 as seed ortholog is 100%.

Group of orthologs #1784. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.stipitis:50

F6W282              	100.00%		A3GFP4              	100.00%
Bootstrap support for F6W282 as seed ortholog is 100%.
Bootstrap support for A3GFP4 as seed ortholog is 100%.

Group of orthologs #1785. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.stipitis:50

F6WKB8              	100.00%		A3GFG1              	100.00%
Bootstrap support for F6WKB8 as seed ortholog is 100%.
Bootstrap support for A3GFG1 as seed ortholog is 100%.

Group of orthologs #1786. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.stipitis:50

F6VE17              	100.00%		A3LQD5              	100.00%
Bootstrap support for F6VE17 as seed ortholog is 100%.
Bootstrap support for A3LQD5 as seed ortholog is 100%.

Group of orthologs #1787. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.stipitis:50

F7BPT5              	100.00%		A3M0J2              	100.00%
Bootstrap support for F7BPT5 as seed ortholog is 100%.
Bootstrap support for A3M0J2 as seed ortholog is 100%.

Group of orthologs #1788. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.stipitis:50

H2XWM7              	100.00%		A3LY65              	100.00%
Bootstrap support for H2XWM7 as seed ortholog is 100%.
Bootstrap support for A3LY65 as seed ortholog is 100%.

Group of orthologs #1789. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:49

F7AV79              	100.00%		A3LZN0              	100.00%
F6TJR3              	41.10%		
F6V6C3              	21.69%		
Bootstrap support for F7AV79 as seed ortholog is 100%.
Bootstrap support for A3LZN0 as seed ortholog is 100%.

Group of orthologs #1790. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:49

F6SH39              	100.00%		A3LNN4              	100.00%
F6PW95              	14.94%		
Bootstrap support for F6SH39 as seed ortholog is 100%.
Bootstrap support for A3LNN4 as seed ortholog is 100%.

Group of orthologs #1791. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:49

F6WYE6              	100.00%		A3LWH0              	100.00%
                    	       		A3LZX0              	47.78%
Bootstrap support for F6WYE6 as seed ortholog is 100%.
Bootstrap support for A3LWH0 as seed ortholog is 100%.

Group of orthologs #1792. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.stipitis:49

F6Y7L6              	100.00%		A3LQT4              	100.00%
Bootstrap support for F6Y7L6 as seed ortholog is 100%.
Bootstrap support for A3LQT4 as seed ortholog is 100%.

Group of orthologs #1793. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.stipitis:48

F6SF06              	100.00%		A3GHX1              	100.00%
F6VTD9              	54.02%		
Bootstrap support for F6SF06 as seed ortholog is 54%.
Alternative seed ortholog is F6ZFG0 (2 bits away from this cluster)
Bootstrap support for A3GHX1 as seed ortholog is 100%.

Group of orthologs #1794. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.stipitis:48

F6R725              	100.00%		A3LWF5              	100.00%
Bootstrap support for F6R725 as seed ortholog is 100%.
Bootstrap support for A3LWF5 as seed ortholog is 100%.

Group of orthologs #1795. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.stipitis:48

H2XU70              	100.00%		A3LS24              	100.00%
Bootstrap support for H2XU70 as seed ortholog is 100%.
Bootstrap support for A3LS24 as seed ortholog is 100%.

Group of orthologs #1796. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

F6Y6V2              	100.00%		A3LWQ8              	100.00%
H2Y196              	10.88%		A3LRC7              	12.83%
Bootstrap support for F6Y6V2 as seed ortholog is 100%.
Bootstrap support for A3LWQ8 as seed ortholog is 100%.

Group of orthologs #1797. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

F6PNS0              	100.00%		A3GEW4              	100.00%
F6PNT4              	52.94%		
Bootstrap support for F6PNS0 as seed ortholog is 100%.
Bootstrap support for A3GEW4 as seed ortholog is 100%.

Group of orthologs #1798. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.stipitis:47

F6UP66              	100.00%		A3LS30              	100.00%
Bootstrap support for F6UP66 as seed ortholog is 62%.
Alternative seed ortholog is F6PKC1 (5 bits away from this cluster)
Bootstrap support for A3LS30 as seed ortholog is 100%.

Group of orthologs #1799. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

H2XMF0              	100.00%		A3GFW6              	100.00%
Bootstrap support for H2XMF0 as seed ortholog is 100%.
Bootstrap support for A3GFW6 as seed ortholog is 100%.

Group of orthologs #1800. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

H2XN49              	100.00%		A3LPM5              	100.00%
Bootstrap support for H2XN49 as seed ortholog is 100%.
Bootstrap support for A3LPM5 as seed ortholog is 100%.

Group of orthologs #1801. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

H2XVJ4              	100.00%		A3LP73              	100.00%
Bootstrap support for H2XVJ4 as seed ortholog is 100%.
Bootstrap support for A3LP73 as seed ortholog is 100%.

Group of orthologs #1802. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

H2XN89              	100.00%		A3LZ85              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for A3LZ85 as seed ortholog is 100%.

Group of orthologs #1803. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.stipitis:47

Q4H3A1              	100.00%		A3LYL5              	100.00%
Bootstrap support for Q4H3A1 as seed ortholog is 100%.
Bootstrap support for A3LYL5 as seed ortholog is 100%.

Group of orthologs #1804. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.stipitis:46

F7B236              	100.00%		A3LYB7              	100.00%
F6YVE9              	5.81%		
Bootstrap support for F7B236 as seed ortholog is 100%.
Bootstrap support for A3LYB7 as seed ortholog is 100%.

Group of orthologs #1805. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.stipitis:46

F6QCQ5              	100.00%		A3GGJ8              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for A3GGJ8 as seed ortholog is 100%.

Group of orthologs #1806. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.stipitis:46

H2XQB1              	100.00%		A3LXD3              	100.00%
Bootstrap support for H2XQB1 as seed ortholog is 100%.
Bootstrap support for A3LXD3 as seed ortholog is 100%.

Group of orthologs #1807. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:45

F6T5Q1              	100.00%		A3LPY2              	100.00%
F6RDW1              	34.84%		A3LPY1              	31.92%
F7BDX5              	23.23%		
F6VQ32              	21.81%		
F6QSB8              	21.53%		
F6X6U3              	21.53%		
F6QDM9              	8.50%		
F6Y3D6              	8.22%		
Bootstrap support for F6T5Q1 as seed ortholog is 100%.
Bootstrap support for A3LPY2 as seed ortholog is 100%.

Group of orthologs #1808. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:45

F7B9B6              	100.00%		A3LSV2              	100.00%
F7B704              	6.84%		
Bootstrap support for F7B9B6 as seed ortholog is 100%.
Bootstrap support for A3LSV2 as seed ortholog is 100%.

Group of orthologs #1809. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:45

F6PMM3              	100.00%		A3LRK2              	100.00%
Bootstrap support for F6PMM3 as seed ortholog is 100%.
Bootstrap support for A3LRK2 as seed ortholog is 100%.

Group of orthologs #1810. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.stipitis:3

F6VUS5              	100.00%		A3LXN4              	100.00%
Bootstrap support for F6VUS5 as seed ortholog is 43%.
Alternative seed ortholog is F6S2B0 (5 bits away from this cluster)
Bootstrap support for A3LXN4 as seed ortholog is 42%.
Alternative seed ortholog is A3GHL5 (3 bits away from this cluster)

Group of orthologs #1811. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:45

F7AE88              	100.00%		A3LYY2              	100.00%
Bootstrap support for F7AE88 as seed ortholog is 100%.
Bootstrap support for A3LYY2 as seed ortholog is 100%.

Group of orthologs #1812. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.stipitis:45

H2XXK2              	100.00%		A3LPB2              	100.00%
Bootstrap support for H2XXK2 as seed ortholog is 100%.
Bootstrap support for A3LPB2 as seed ortholog is 100%.

Group of orthologs #1813. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:44

F6PML6              	100.00%		A3LS19              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for A3LS19 as seed ortholog is 100%.

Group of orthologs #1814. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:44

F6XVG4              	100.00%		A3GG65              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for A3GG65 as seed ortholog is 100%.

Group of orthologs #1815. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:44

F7AGE4              	100.00%		A3GF00              	100.00%
Bootstrap support for F7AGE4 as seed ortholog is 100%.
Bootstrap support for A3GF00 as seed ortholog is 100%.

Group of orthologs #1816. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:44

F6YGM8              	100.00%		A3LZB6              	100.00%
Bootstrap support for F6YGM8 as seed ortholog is 100%.
Bootstrap support for A3LZB6 as seed ortholog is 100%.

Group of orthologs #1817. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:44

H2XYB2              	100.00%		A3LS66              	100.00%
Bootstrap support for H2XYB2 as seed ortholog is 100%.
Bootstrap support for A3LS66 as seed ortholog is 100%.

Group of orthologs #1818. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.stipitis:44

Q1RLI5              	100.00%		A3LR23              	100.00%
Bootstrap support for Q1RLI5 as seed ortholog is 100%.
Bootstrap support for A3LR23 as seed ortholog is 100%.

Group of orthologs #1819. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.stipitis:43

F6PMB4              	100.00%		A3LTJ9              	100.00%
Bootstrap support for F6PMB4 as seed ortholog is 100%.
Bootstrap support for A3LTJ9 as seed ortholog is 100%.

Group of orthologs #1820. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.stipitis:42

H2XKL0              	100.00%		A3LU47              	100.00%
H2XY86              	20.33%		A3LUM3              	43.31%
H2XXC3              	17.01%		A3LZN4              	17.36%
Bootstrap support for H2XKL0 as seed ortholog is 100%.
Bootstrap support for A3LU47 as seed ortholog is 100%.

Group of orthologs #1821. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.stipitis:42

F6PWM6              	100.00%		A3LS35              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 100%.
Bootstrap support for A3LS35 as seed ortholog is 100%.

Group of orthologs #1822. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.stipitis:42

H2XLR4              	100.00%		A3GFP9              	100.00%
Bootstrap support for H2XLR4 as seed ortholog is 100%.
Bootstrap support for A3GFP9 as seed ortholog is 100%.

Group of orthologs #1823. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.stipitis:41

F7A602              	100.00%		A3GG21              	100.00%
H2XTD7              	7.36%		
Bootstrap support for F7A602 as seed ortholog is 100%.
Bootstrap support for A3GG21 as seed ortholog is 100%.

Group of orthologs #1824. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.stipitis:41

F6Q599              	100.00%		A3GHB1              	100.00%
Bootstrap support for F6Q599 as seed ortholog is 100%.
Bootstrap support for A3GHB1 as seed ortholog is 100%.